[ { "uniprot_canonical_ac": "A0A5G2R189-1", "uniprot_ac": "A0A5G2R189", "uniprot_id": "A0A5G2R189_PIG", "mass": { "chemical_mass": 42086.0, "monoisotopic_mass": 42086.0 }, "refseq": { "ac": "XP_003129683", "name": "proteasomal ATPase-associated factor 1 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129683" }, "gene_names": [ { "name": "PAAF1", "type": "recommended", "evidence": [ { "id": "A0A5G2R189", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189" } ] }, { "name": "PAAF1", "type": "synonym", "evidence": [ { "id": "XP_003129683", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129683" } ] } ], "protein_names": [ { "name": "Proteasomal ATPase-associated factor 1", "type": "recommended", "evidence": [ { "id": "A0A5G2R189", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#names_and_taxonomy" } ] }, { "name": "WD repeat-containing protein 71", "type": "synonym", "evidence": [ { "id": "A0A5G2R189", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#names_and_taxonomy" } ] }, { "name": "proteasomal ATPase-associated factor 1 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_003129683", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129683" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R189", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PAAF1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189", "locus": { "chromosome": "9", "start_pos": 8335121, "end_pos": 8278905, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014831", "url": "https://www.ensembl.org/id/ENSSSCG00000014831" } ] } } ], "crossref": [ { "id": "ENSSSCG00000014831", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014831", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514355", "url": "https://www.ncbi.nlm.nih.gov/gene/100514355", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020472", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020472", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514355", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514355", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R189", "url": "https://www.orthodb.org/?gene=A0A5G2R189", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F2Z5W5", "url": "https://www.orthodb.org/?gene=F2Z5W5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19857", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19857", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19857:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19857:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003129683", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129683", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZPQ0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZPQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZPQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYH8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYH8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYH8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYH8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A3W4", "url": "https://www.uniprot.org/uniprotkb/A0A287A3W4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A3W4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A3W4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLC9", "url": "https://www.uniprot.org/uniprotkb/A0A287BLC9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BLC9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BLC9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R189", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R189-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5W5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5W5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5W5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5W5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RKD5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RKD5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RKD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RKD5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5W5", "url": "https://www.uniprot.org/uniprotkb/F2Z5W5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5W5-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5W5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKKSIHISCPKENASSKFLAPYTTFSRIHAKSITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 392, "header": "tr|A0A5G2R189-1|A0A5G2R189_PIG Isoform 1 of Proteasomal ATPase-associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=1 CANONICAL=A0A5G2R189-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#A0A286ZPQ0-1", "sequence": { "sequence": "MHAPAKGKDEGEAWLSCHPPGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKKSIHISCPKENASSKFLAPYTTFSRIHAKSITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 383, "header": "tr|A0A286ZPQ0-1|A0A286ZPQ0_PIG Computationally mapped isoform of Proteasomal ATPase-associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=2 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334138, "end_pos": 8281056, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057593.2", "url": "https://www.ensembl.org/id/ENSSSCT00000057593.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033575.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033575.2" } ] } }, { "isoform_ac": "A0A286ZYH8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#A0A286ZYH8-1", "sequence": { "sequence": "MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKKSIHISCPKENASSKFLAPYTTFSRIHAKSRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 359, "header": "tr|A0A286ZYH8-1|A0A286ZYH8_PIG Computationally mapped isoform of Proteasomal ATPase associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=2 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334138, "end_pos": 8281225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042065.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042065.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036678.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036678.2" } ] } }, { "isoform_ac": "A0A287A3W4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#A0A287A3W4-1", "sequence": { "sequence": "MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKKSIHISCPKENASSKFLAPYTTFSRIHAKSITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGGHMGEADLHMLSRWSRATLSAL", "length": 362, "header": "tr|A0A287A3W4-1|A0A287A3W4_PIG Computationally mapped isoform of Proteasomal ATPase associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=1 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334131, "end_pos": 8281225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054161.1", "url": "https://www.ensembl.org/id/ENSSSCT00000054161.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038661.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038661.1" } ] } }, { "isoform_ac": "A0A287BLC9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#A0A287BLC9-1", "sequence": { "sequence": "MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKKSIHISCPKENASSKFLAPYTTFSRIHAKSITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 327, "header": "tr|A0A287BLC9-1|A0A287BLC9_PIG Computationally mapped isoform of Proteasomal ATPase associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=1 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334138, "end_pos": 8281225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063752.1", "url": "https://www.ensembl.org/id/ENSSSCT00000063752.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057207.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057207.1" } ] } }, { "isoform_ac": "A0A5G2R189-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#A0A5G2R189-1", "sequence": { "sequence": "MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKKSIHISCPKENASSKFLAPYTTFSRIHAKSITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 392, "header": "tr|A0A5G2R189-1|A0A5G2R189_PIG Isoform 1 of Proteasomal ATPase-associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=1 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334138, "end_pos": 8281225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071283.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071283.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064277.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064277.1" } ] } }, { "isoform_ac": "A0A5G2R5W5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#A0A5G2R5W5-1", "sequence": { "sequence": "MLLLCYIGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 340, "header": "tr|A0A5G2R5W5-1|A0A5G2R5W5_PIG Computationally mapped isoform of Proteasomal ATPase-associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=2 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334138, "end_pos": 8286351, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083314.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083314.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072484.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072484.2" } ] } }, { "isoform_ac": "A0A5G2RKD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#A0A5G2RKD5-1", "sequence": { "sequence": "MATPMAHGSSWPTFFLGVLPVSICSLGADFLSSLCTQALIQFLSLPTSLLISAMYLLGQTKSIHISCPKENASSKFLAPYTTFSRIHAKSITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 388, "header": "tr|A0A5G2RKD5-1|A0A5G2RKD5_PIG Computationally mapped isoform of Proteasomal ATPase-associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=1 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334138, "end_pos": 8290277, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091287.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091287.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072542.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072542.1" } ] } }, { "isoform_ac": "F2Z5W5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189/entry#F2Z5W5-1", "sequence": { "sequence": "MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPTLYGSLTCQGIGLDGIPEVIASEGFVVNEINKALIQFLSLPTSLLISAMYLLGQTKSIHISCPKENASSKFLAPYTTFSRIHAKSITCLDISSGGGLGVSSSTDGSMKIWQASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVERGKNVVSGSRDGTARLWDCGRSACLGVIADCGCSINGVAVGAADNSINLGSPEQTPSEREVGTESKMLLLAREDKKLQCVGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQDGNIYQLDVRNPRAPVQVIHRSGAPVLSLLSFRDGFIASQGDGSSFIVQQDLDYVIELTGADCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL", "length": 415, "header": "tr|F2Z5W5-1|F2Z5W5_PIG Computationally mapped isoform of Proteasomal ATPase-associated factor 1 OS=Sus scrofa OX=9823 GN=PAAF1 PE=1 SV=2 CANONICAL=A0A5G2R189-1" }, "locus": { "chromosome": "9", "start_pos": 8334138, "end_pos": 8281225, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016183.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016183.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015750.3", "url": "https://www.ensembl.org/id/ENSSSCP00000015750.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R189", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514355", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514355", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R189", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189" } ], "pmid": "" }, { "name": "proteasome complex", "id": "GO:0000502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000502", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R189", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R189" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 75, "end_pos": 77, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 75, "end_pos": 77 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"https://www.ncbi.nlm.nih.gov/protein/XP_003133638" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R1C2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1C2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FAM117B", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1C2", "locus": { "chromosome": "15", "start_pos": 106284313, "end_pos": 106183205, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016114", "url": "https://www.ensembl.org/id/ENSSSCG00000016114" } ] } } ], "crossref": [ { "id": "A0A5G2R1C2", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R1C2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016114", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016114", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512564", "url": "https://www.ncbi.nlm.nih.gov/gene/100512564", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026642", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026642", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512564", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512564", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PREIPQF", "url": "https://omabrowser.org/oma/group/PREIPQF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2R1C2", "url": "https://www.orthodb.org/?gene=A0A5G2R1C2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14972", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14972", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14972:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14972:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15388", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15388", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003133638", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133638", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R1C2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1C2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1C2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1C2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSQRVRRNGSPTPAGSLGGGAVTTAGGSGSRLQPMRATVPFQLKQQQQQHGSPTRSNGGGGGGNNNGGCCGGASGPSGGGGSSGGGAPRTASRSTSPTRGGGSAAARTSPTVATQTGASATSTRGTSPTRGAAPGARGSPPRPQPPPPLLGTVSSPCSSPTHLWTGEVSAAPPPARVRHRRRSPEQSRSSPERRSPSAPVCKAGDKTRPPSSSPSSIIRRTSSLDTLAAPYLAGHWPRDGHGQAAPCMKDKATQTESAWAEEYSEKKKGSHKRSASWGSTDQLKEIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQCQAPVPKSALIPVIPITKSTGSRFRNSVEGLNQEIEIIIKETGEKEEQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTPGGAERGSNNSSRSQSVSPTSFLTISNEGSEESPCSADDLLVDPRDKENGNNSPLPKYATSPKPNNSYMFKREPPEGCERVKVFEECSPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSILKPLLPTPDLTLKGSVHSLTVTTGMTTTLLQPIAVASLSTNTEQDRVSRGTSTVLPPASLLPPPEPIEEAEG", "length": 592, "header": "tr|A0A5G2R1C2-1|A0A5G2R1C2_PIG Isoform 1 of Family with sequence similarity 117 member B OS=Sus scrofa OX=9823 GN=FAM117B PE=4 SV=1 CANONICAL=A0A5G2R1C2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R1C2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1C2/entry#A0A5G2R1C2-1", "sequence": { "sequence": "MSQRVRRNGSPTPAGSLGGGAVTTAGGSGSRLQPMRATVPFQLKQQQQQHGSPTRSNGGGGGGNNNGGCCGGASGPSGGGGSSGGGAPRTASRSTSPTRGGGSAAARTSPTVATQTGASATSTRGTSPTRGAAPGARGSPPRPQPPPPLLGTVSSPCSSPTHLWTGEVSAAPPPARVRHRRRSPEQSRSSPERRSPSAPVCKAGDKTRPPSSSPSSIIRRTSSLDTLAAPYLAGHWPRDGHGQAAPCMKDKATQTESAWAEEYSEKKKGSHKRSASWGSTDQLKEIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQCQAPVPKSALIPVIPITKSTGSRFRNSVEGLNQEIEIIIKETGEKEEQLIPQDIPDGHRAPPPLVQRSSSTRSIDTQTPGGAERGSNNSSRSQSVSPTSFLTISNEGSEESPCSADDLLVDPRDKENGNNSPLPKYATSPKPNNSYMFKREPPEGCERVKVFEECSPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSILKPLLPTPDLTLKGSVHSLTVTTGMTTTLLQPIAVASLSTNTEQDRVSRGTSTVLPPASLLPPPEPIEEAEG", "length": 592, "header": "tr|A0A5G2R1C2-1|A0A5G2R1C2_PIG Isoform 1 of Family with sequence similarity 117 member B OS=Sus scrofa OX=9823 GN=FAM117B PE=4 SV=1 CANONICAL=A0A5G2R1C2-1" }, "locus": { "chromosome": "15", "start_pos": 106280704, "end_pos": 106183404, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079139.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079139.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070913.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070913.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 12, "start_aa": "Thr", "end_pos": 12, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr12", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R1C2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1C2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512564", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512564", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1M7C4-1", "protein_name": "Family with sequence similarity 117 member B", "gene_name": "FAM117B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSQRVRRNGSPTPAGSLGGSAVATAGGSGSRLQPMRATVPFQLKQQQQHGSPTRSNGGGGGGNNNGGCCGGASGPSGGGGSGGAPRTASRSTSPTRGGGSAAARTSPTVATQTGASATSTRGTSPTRAAAPGARGSPPRPQPPPPLLGTVSSPCSSPTHLWTGEVSAAPPPARVRHRRRSPEHSRSSPERRSPSAPVCKAGDKTRPPSSSPSSIIRRTSSLDTLAAPYLAGHWPRDGHGQAAPCMRDKATQTESAWAEEYSEKKKGSHKRSASWGSTDQLKEIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQSQAPVPKSALIPVIPITKSTGSRFRNSVEGLNQEIEIIIKETGEKEEQLIPQDIPDGHRAPPPLAQRSSSTRSTDTQTPGGAERGSNDSSRSQSVSPTSFLTISNEGSEESPCSADDLLVDPRDKENGNNSPLPKYATSPKPNNSYMFKREPPEGCERVKVFEECSPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSILKPLLPTPDLTLKGSGHSLTVTTGMTTTLLQPIAVASLSTNTEQDRVSRGTSTVLPPASLLPTPEPIEEAEG", "length": 589 }, "evidence": [ { "id": "A0A5G2R1C2", "url": "https://omabrowser.org/oma/group/A0A5G2R1C2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V1A6K3-1", "protein_name": "Family with sequence similarity 117 member B", "gene_name": "FAM117B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSHQRVRRGGSPTPAASPGGGGAAAAGGGAGASGRLQPMRATVPFQLKQQQQHGSPTRSGASAPGGGLARAAAASRSISPTRATPTGGRAGPATAAQTPGGGGSPTRGGGGARGSPPRPHQLPPPPPPPPPPVACGPSPCSSPLPEGSSTAGRVRHPRHSPEQGRSSPERKSPGSPGCKADKSRPPSSSPSSIIRRTSSLDTLAAPYLAGQWPRDNHGQAVPCMRDKATQTESAWAEEYLEKKRSSHKRSASWGSTEQLKEIAKLRQQLQRSKHSSRHHRDKERHSPFHGNHAAINHSQAPIPKSALVPVIPITKSTGSRFRNSVEGLNQEIEIIIKETGDKEEQLVPQDIPDGHRAPPPLIQRSSSTRSIDTQTPGGAERGSNNSSRSQSVSPTSFLTICNESSEESPCSTEDLVDSRDKENGNNSPLPKYATSPKPNNSYMFKREPPEGCEKVKVFEESLPKPLHEIPAFYCPDKNKVNFIPKSGSAFCLVSILKPLLPTQDLTLKGTTHSLTVSSGMTPSLLQPISMASLSANTDQDRISRGTSTVIPQTSILQQSGRIEEAEG", "length": 567 }, "evidence": [ { "id": "A0A5G2R1C2", "url": "https://omabrowser.org/oma/group/A0A5G2R1C2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AB32TZJ0-1", "protein_name": "Protein FAM117B isoform X1", "gene_name": "fam117bb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSQRVRKNGSPTSGVTTGSPIGSPGISAAGVNLLGRLLPMKATVPFQLKTQPQHPLQTRTVLSSSSSGNGKCHSSGAHSRSPTRSLSSSAVSAATSTSSAFITPTAASSSPSPSSSSRTSPIIVVHATNPRSSSSSAHSGVHLGPQCCSPSQQTSCGCSDPSAFTSHLSSSPSSSSPLWSCGHRAKPLQTPEHDRLSPERLSPSSPVCTDKHRLPVAGSWCTTSSNGSIRRTSSLDALTAPYLSGHWPRDASHAPCAPCMRDKSTQTPSAWADECGEKKRGCHKRSASCGSTDQLKEIVKLRQQLQRSKHSSRHHRDKERKSPFNGNHAAFSQSQLLSTCFLEPLFTRLELHCCVQLCSASQVCRRTCQATGQTGNSGKATVSGQLAPIPKSVLISIPISKSSVSRFRNSVEGLNQEIERIIIRDTGDREEQLIPQEVPDGHRAPPPLCQRSIDTQTPLGTATGSNSSSRSQSISPTFLSVPSESCSDSPSPHEDETLADGREKDLALCSPLPKYASSPKPNNSFMFKREPPEGCERVKVFTEETQARPPREIPQFLCPDRNKVNFIPKSGSAFCLVSIPKPLMATQELNNLKNQSSTRLTPEPEPRVPRRTCMLSQQPSGSAPSSCPSES", "length": 631 }, "evidence": [ { "id": "A0A5G2R1C2", "url": "https://omabrowser.org/oma/group/A0A5G2R1C2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3U3E2-1", "protein_name": "Protein FAM117B", "gene_name": "Fam117b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSQRVRRNGSPTPAGALAGGAVGPPGGPGSRLQPMRATVPFQLKQQQQHGSPTRGGGGGGNNGGNGGASGPSGGGGSGGPRTASRSTSPTRGGGGSAAARTSPTVATQTGASVTSTRGTSPTRGTAPGARSSPPRPQPPPPLLGTVSSPSSSPTHLWPSEVIAAPPSARVRHRRRSPEQGRPSAEKRSPSAPVCKAGDKTHPPSSSSSSIIRRTSSLDTLAAPYLAGHWPRDIRGQAAPCMRDKATQTESAWAEEYEKKKGSHKRSSSWGSTEQLKEIAKLRQQLQRSKHSSRHHRDKERQSPFHGNHAAINQSQAPAPKSTLVPAGPITKSSGSRFRNSVEGLNQEIEIIIKETGEKEEQLIPQDIPDGHRAPPPLAQRSSSTRSIDTQTPGGADKGSNNSSRSQSVSPTSFLTISNEGSEESPCSADDLLADPRDKENGNNSPLPKYATSPKPNNSYMFKREPPEGCERVKVFEECSPKQLHEIPAFYCPDKNKVNFIPKSGSAFCLVSILKPLLPTPDLTLKGSGHSLTVTTGMTTTLLQPISMASLSTNTEQERVSRGTSTVLPSASLHAPPEPIEEAEG", "length": 584 }, "evidence": [ { "id": "A0A5G2R1C2", "url": "https://omabrowser.org/oma/group/A0A5G2R1C2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P1L5-1", "protein_name": "Protein FAM117B", "gene_name": "FAM117B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R1N5-1", "uniprot_ac": "A0A5G2R1N5", "uniprot_id": "A0A5G2R1N5_PIG", "mass": { "chemical_mass": 15691.0, "monoisotopic_mass": 15691.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { 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"Protein" ] } ], "sequence": { "sequence": "MNEPSNLTAKLESCSPDLVARPLLHSLLPPLALASHLDVCVVGWMELLPHRVGTLALAAIGIVLLGVDDPGAPSDQVEVHLELDLPTQLASVLQVISAVPPSLLPRELTLLDPPGALSFPQQGGATQPPLLWREVGVQHEEHVGDRW", "length": 147, "header": "tr|A0A5G2R1N5-1|A0A5G2R1N5_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A5G2R1N5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R1N5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1N5/entry#A0A5G2R1N5-1", "sequence": { "sequence": "MNEPSNLTAKLESCSPDLVARPLLHSLLPPLALASHLDVCVVGWMELLPHRVGTLALAAIGIVLLGVDDPGAPSDQVEVHLELDLPTQLASVLQVISAVPPSLLPRELTLLDPPGALSFPQQGGATQPPLLWREVGVQHEEHVGDRW", "length": 147, "header": "tr|A0A5G2R1N5-1|A0A5G2R1N5_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=A0A5G2R1N5-1" }, "locus": { "chromosome": "14", "start_pos": 73355587, "end_pos": 73355147, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089672.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089672.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070260.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070260.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R1N5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1N5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 6, "end_pos": 8, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2R1N5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 147, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2R1N5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2R1N5" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 6, "end_pos": 8 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { 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homolog", "type": "synonym", "evidence": [ { "id": "A0A5G2R1P1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1P1/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C4orf50 homolog", "type": "synonym", "evidence": [ { "id": "NP_001382603", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001382603" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R1P1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1P1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C8H4orf50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1P1", "locus": {} } ], "crossref": [ { "id": "A0A5G2R1P1", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R1P1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008709", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008709", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "102165264", "url": "https://www.ncbi.nlm.nih.gov/gene/102165264", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR032771", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032771", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR36866", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36866", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36866:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36866:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15030", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15030", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001382603", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001382603", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R1P1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1P1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1P1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPAAKGRTEKRFSYVVRAPGGGGGFDVVNVDVKMDAAWIFQDAEDAGKEPGRLPEEAARSPGVDTRTRRKQLESSEQTLLAAVDKHVMSESGRRSRIQELELSERKLLQKVDQLSTRVFQERSASLWAQEKLEVLQGELASQDGPGHAQDELQPLPREQALEACGSQGSDRAPGPSGSAGQPSQGSCTCVLMSGPGTPADTLPGDLAGSDHAQVTPEPSLGEEILLIWDCPLGQCVDGSLLPVELAWISEQKPAAPPARESFLLVQTSIPTPWGRPGDPALLPLPLLPLEASPEDLQAQQMLKVRPPPAPSATAPTGRGHRARSLDARLCQESPHAADHRFPRTGPEDLKELWKEGGAPARRLEMRAKRTWGRKEGALGDRGQPSQEGDGSLSLSLEAGVRATEGALNETGASRPQAAAPCPWSKRELPLPLLQGEASMPTEGPESSGRKGRGGGGGGGGRGGGLSPPSSEAVPAATFSRAQSASGPPLMGAQQGRASRRVQGQEEVRVGSGNAQLLPEESPGEQGQEEEEEEEEEEEPVMHLEGSSPAPSHVHREPGSEDSRGRETLFFLEEGGLPPSPGLALSPQGTEPTSQPWPPSKGHEGSALTIEEFEKEMEACFQQLSILKLGSGGRGGAASLLAGEAWSFAPRWHSGREDEHPQQALANQGLHCCFPEEAKLEMRGDDVEPGGTEALGTESLPRLGLDGVGLSPSPPEGSSQRGWNGQAQHPSTLRRARRRFHRLMSGLKKERSQVFQDNAKLRAERERCCRRLRALEKERERHVSKIATLDQQNGALLGAISDLKGERDQCAQVIADLEDCNGKSYRRISELEEENDRLRGDLGRLGKAGSASIRKSRGATEPVTPENGELGALISQLGVRYKELIKDAARGIEDMIQAFRGENEALPRRIRVLEREVAAGSSPEGVRLLRAGGHRQEKSTMAVDRVNTVERGVQVTQLSGQLTASVPGPPSEQEMGLAGEWTEPRLSLENSRRTADSTAPSLVRGNAARCSALQGSSDRAGVKEAPKRPWCPADQGQAPRSPHSGFQHRDPEAEASEEDLGLRVKQLCHQVRTLQCQLRDQNSAHRALQASFEEATGLQGELQGKAKLASLVQKCRERNHLITRLLEELHRHEGGNHLLSEMAHSMVTDVALAEYAATFLAPGDPETSCHLDLDVESEQTADEKAQKYLLNPELDSVLQRPLHSESWPIPEAEWPQTAQLDSLKLPWPSGPMPDPGTGQASVAVEPGLPVQWLQEQGGRSRPVLQAAPLPPCPALRSPARILALHQELRQSVCSSAQVHQSLLEL", 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"https://www.uniprot.org/uniprotkb/A0A5G2R256/entry#A0A5G2R256-1", "sequence": { "sequence": "MSSQKKVKNSQARKRTSQGSNNYQTRLSAWKAQEDLSVSKSISKHGQNNSLEDYEHADDQAEDALQIALRYFEKGPTKTSQSKDKTLEKHLITVENVAWKSGLAPEGIDILLNVALSGKFGSAVNTRIFKCLIPATLISENSVVKAVSWLCVGKCSGSTKILFYRWLVAMFDFIDHKEQINLLYGFFFASLQDDSMCPYVCHLLCLLTKKENVKPFRVRKLLDLQVKMGMQPHLQALLSLYKFFVPTLISVSLPMRKKIFFKNSENLWKTALLALRQRNQGLAPEPLKLMLTNVHPIKRKWNSHSLIPVLNSHNASKESGKKGMNLCDYFNSNGSFPLEQLKSFPQLLQNIHCLELPSQMGAVLNNSLLLHYINCVRDESVLLRLYHWLSQTLQEECIWYKVNNYEHGKEFTNFLNTIIKAEEGFYSCEAFLYKSLPLWDGFCCRSQFLQLVSWIPFSSFSEMKPLLFDHLSRLFFTSTIYFKCSILQCLKELLQNWLLWLSMDIHVKSVTNSPLETTLGGSLNSVSELIHYVGWLSTTAMRLESSSTFLLHFILDFYEKVCDIYINYNLPLVVLFPPGIFYLALLSLDSSVLNQLCYIMDRYRKNLTAAKKNELVQKAKSEFSFSSKTYQEFNHYLTAMVGCLWTSKPFQKGLYVDPKVLEKAAVAEYKNSLNLVHHPALLSYAVSFLLQGWPEERTVNMSSIRGKKWNWYLDYLFSEGLQGLKLFIKSSIHRSSVPAESINHDQH", "length": 747, "header": "tr|A0A5G2R256-1|A0A5G2R256_PIG Isoform 1 of Centromere protein I OS=Sus scrofa OX=9823 GN=CENPI PE=3 SV=1 CANONICAL=A0A5G2R256-1" }, "locus": { "chromosome": "X", "start_pos": 82825652, "end_pos": 82778493, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075104.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075104.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064613.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064613.1" } ] } }, { "isoform_ac": "F1S1L4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256/entry#F1S1L4-1", "sequence": { "sequence": "MSSQKKVKNSQARKRTSQGSNNYQTRLSAWKAQEDLSVSKSISKHGQNNSLEDYEHADDQAEDALQIALRYFEKGPTKTSQSKDKTLEKHLITVENVAWKSGLAPEGIDILLNVALSGKFGSAVNTRIFKCLIPATLISENSVVKAVSWLCVGKCSGSTKILFYRWLVAMFDFIDHKEQINLLYGFFFASLQDDSMCPYVCHLLCLLTKKENVKPFRVRKLLDLQVKMGMQPHLQALLSLYKFFVPTLISVSLPMRKKIFFKNSENLWKTALLALRQRNQGLAPEPLKLMLTNVHPIKRKWNSHSLIPVLNSHNASKESGKKGMNLCDYFNSNGSFPLEQLKSFPQLLQNIHCLELPSQMGAVLNNSLLLHYINCVRDESVLLRLYHWLSQTLQEECIWYKVNNYEHGKEFTNFLNTIIKAEEGFYSCEAFLYKSLPLWDGFCCRSQFLQLVSWIPFSSFSEMKPLLFDHLSRLFFTSTIYFKCSILQCLKELLQNWLLWLSMDIHVKSVTNSPLETTLGGSLNSVSELIHYVGWLSTTAMRLESSSTFLLHFILDFYEKVCDIYINYNLPLVVLFPPGIFYLALLSLDSSVLNQLCYIMDRYRKNLTAAKKNELVQKAKSEFSFSSKTYQEFNHYLTAMVGCLWTSKPFQKGLYVDPKVLEKAAVAEYKNSLNLVHHPALLSYAVSFLLQGKKWNWYLDYLFSEGLQGLKLFIKSSIHRSSVPAESINHDQH", "length": 733, "header": "tr|F1S1L4-1|F1S1L4_PIG Computationally mapped isoform of Centromere protein I OS=Sus scrofa OX=9823 GN=CENPI PE=3 SV=2 CANONICAL=A0A5G2R256-1" }, "locus": { "chromosome": "X", "start_pos": 82825652, "end_pos": 82778493, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032805.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032805.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000029672.2", "url": "https://www.ensembl.org/id/ENSSSCP00000029672.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R256", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-141430", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "resource": "Reactome", "description": "Inactivation of APC/C via direct inhibition of the APC/C complex" }, { "id": "R-SSC-141444", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141444", "resource": "Reactome", "description": "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" }, { "id": "R-SSC-2467813", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467813", "resource": "Reactome", "description": "Separation of Sister Chromatids" }, { "id": "R-SSC-2500257", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2500257", "resource": "Reactome", "description": "Resolution of Sister Chromatid Cohesion" }, { "id": "R-SSC-5663220", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663220", "resource": "Reactome", "description": "RHO GTPases Activate Formins" }, { "id": "R-SSC-606279", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-606279", "resource": "Reactome", "description": "Deposition of new CENPA-containing nucleosomes at the centromere" }, { "id": "R-SSC-68877", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68877", "resource": "Reactome", "description": "Mitotic Prometaphase" }, { "id": "R-SSC-9648025", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648025", "resource": "Reactome", "description": "EML4 and NUDC in mitotic spindle formation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "inner kinetochore", "id": "GO:0000939", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000939", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R256", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R256", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R256", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256" } ], "pmid": "" }, { "name": "kinetochore", "id": "GO:0000776", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000776", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R256", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "CENP-A containing chromatin assembly", "id": "GO:0034080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034080", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R256", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256" } ], "pmid": "" }, { "name": "mitotic sister chromatid segregation", "id": "GO:0000070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000070", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R256", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R256" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 314, "end_pos": 316, "annotation": "n_glycosylation_sequon" }, { "start_pos": 333, "end_pos": 335, "annotation": "n_glycosylation_sequon" }, { "start_pos": 365, "end_pos": 367, "annotation": "n_glycosylation_sequon" }, { "start_pos": 48, "end_pos": 50, "annotation": "n_glycosylation_sequon" }, { "start_pos": 606, "end_pos": 608, "annotation": "n_glycosylation_sequon" }, { "start_pos": 700, "end_pos": 702, "annotation": "n_glycosylation_sequon" } ], 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608 }, { "start_pos": 700, "end_pos": 702 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R271-1", "uniprot_ac": "A0A5G2R271", "uniprot_id": "A0A5G2R271_PIG", "mass": { "chemical_mass": 63243.0, "monoisotopic_mass": 63243.0 }, "refseq": {}, "gene_names": [ { "name": "ANKDD1B", "type": "recommended", "evidence": [ { "id": "A0A5G2R271", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R271" } ] } ], "protein_names": [ { "name": "Ankyrin repeat and death domain containing 1B", "type": "synonym", "evidence": [ { "id": "A0A5G2R271", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R271/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R271", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R271" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ANKDD1B", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R271", "locus": { "chromosome": "2", "start_pos": 84688222, "end_pos": 84621148, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014083", "url": "https://www.ensembl.org/id/ENSSSCG00000014083" } ] } } ], "crossref": [ { "id": "A0A5G2R271", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R271", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000014083", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014083", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01670", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01670", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000488", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000488", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011029", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011029", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052457", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052457", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24125", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24125", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24125:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24125:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R271", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R271", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R271-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R271-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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65165.0 }, "refseq": { "ac": "XP_020919386", "name": "ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919386" }, "gene_names": [ { "name": "RALGPS2", "type": "recommended", "evidence": [ { "id": "F1S6Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" } ] }, { "name": "RALGPS2", "type": "synonym", "evidence": [ { "id": "XP_020919386", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919386" } ] } ], "protein_names": [ { "name": "Ral GEF with PH domain and SH3 binding motif 2", "type": "synonym", "evidence": [ { "id": "F1S6Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4/entry#names_and_taxonomy" } ] }, { "name": "ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020919386", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919386" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S6Y4", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RALGPS2", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4", "locus": { "chromosome": "9", "start_pos": 120724218, "end_pos": 120420942, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015523", "url": "https://www.ensembl.org/id/ENSSSCG00000015523" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015523", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015523", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00155", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00155", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13310", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13310", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100737809", "url": "https://www.ncbi.nlm.nih.gov/gene/100737809", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001895", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001895", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008937", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008937", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023578", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023578", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036964", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036964", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737809", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737809", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "XSAESED", "url": "https://omabrowser.org/oma/group/XSAESED/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S6Y4", "url": "https://www.orthodb.org/?gene=F1S6Y4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23113", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23113", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23113:SF357", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23113:SF357", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00617", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00617", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020919386", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919386", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1U6V2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U6V2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U6V2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U6V2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2A9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2A9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2A9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2A9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1ERX6", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ERX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1ERX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ERX6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6Y4", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6Y4-1", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLMNGQASSVNIAAAASEKSSSSESLSDRGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRVARNGYRSHMKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLTAACQSNKQQVPTNLMTFE", "length": 583, "header": "tr|F1S6Y4-1|F1S6Y4_PIG Isoform 1 of Ral GEF with PH domain and SH3 binding motif 2 OS=Sus scrofa OX=9823 GN=RALGPS2 PE=4 SV=3 CANONICAL=F1S6Y4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1U6V2-1", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4/entry#A0A4X1U6V2-1", "sequence": { "sequence": "MDLMNGQASSVNIAAAASEKSSSSESLSDRGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFESSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLTAACQSNKQQVPTNLMTFE", "length": 557, "header": "tr|A0A4X1U6V2-1|A0A4X1U6V2_PIG Computationally mapped isoform of Ral GEF with PH domain and SH3 binding motif 2 OS=Sus scrofa OX=9823 GN=RALGPS2 PE=4 SV=1 CANONICAL=F1S6Y4-1" }, "locus": { "chromosome": "9", "start_pos": 120719593, "end_pos": 120607255, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079437.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079437.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073008.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073008.2" } ] } }, { "isoform_ac": "A0A5G2R2A9-1", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4/entry#A0A5G2R2A9-1", "sequence": { "sequence": "MFQYLKPFNQMNFPVVGGIKKKNTVLHQMQLPSQEDSIMAVPAAYESSQARSRIGALAAGLHCSHARSKTHLQPVAQLMVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFESSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLTAACQSNKQQVPTNLMTFE", "length": 537, "header": "tr|A0A5G2R2A9-1|F1S6Y4_PIG Computationally mapped isoform of Ral GEF with PH domain and SH3 binding motif 2 OS=Sus scrofa OX=9823 GN=RALGPS2 PE=4 SV=1 CANONICAL=F1S6Y4-1" }, "locus": { "chromosome": "9", "start_pos": 120719593, "end_pos": 120612420, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069819.1", "url": "https://www.ensembl.org/id/ENSSSCT00000069819.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068337.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068337.1" } ] } }, { "isoform_ac": "A0A8D1ERX6-1", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4/entry#A0A8D1ERX6-1", "sequence": { "sequence": "MDLMNGQASSVNIAAAASEELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFESSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLTAACQSNKQQVPTNLMTFE", "length": 505, "header": "tr|A0A8D1ERX6-1|A0A8D1ERX6_PIG Computationally mapped isoform of Ral GEF with PH domain and SH3 binding motif 2 OS=Sus scrofa OX=9823 GN=RALGPS2 PE=4 SV=1 CANONICAL=F1S6Y4-1" }, "locus": { "chromosome": "9", "start_pos": 120719593, "end_pos": 120607255, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038783.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038783.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038663.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038663.2" } ] } }, { "isoform_ac": "F1S6Y4-1", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4/entry#F1S6Y4-1", "sequence": { "sequence": "MDLMNGQASSVNIAAAASEKSSSSESLSDRGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRVARNGYRSHMKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLTAACQSNKQQVPTNLMTFE", "length": 583, "header": "tr|F1S6Y4-1|F1S6Y4_PIG Isoform 1 of Ral GEF with PH domain and SH3 binding motif 2 OS=Sus scrofa OX=9823 GN=RALGPS2 PE=4 SV=3 CANONICAL=F1S6Y4-1" }, "locus": { "chromosome": "9", "start_pos": 120719593, "end_pos": 120607255, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016910.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016910.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016457.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016457.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2A9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2A9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100737809", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737809", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JTI5-1", "protein_name": "Ral GEF with PH domain and SH3 binding motif 2", "gene_name": "Ralgps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLMNGQASSVNIGATVSEKSSSSESLSEKGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGASTPRSAASREDLAGPDVGASPQGGRKSSAAEGALLPQTPPSPRHLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRMPRNGYRSHMKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYPAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGSRMNAMLWFKHLSAACQSNRQQIIGSNIMHYNFRRLNIALIFILLYQAICHDS", "length": 605 }, "evidence": [ { "id": "F1S6Y4", "url": "https://omabrowser.org/oma/group/F1S6Y4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8C2QNZ5-1", "protein_name": "Ras-specific guanine nucleotide-releasing factor RalGPS2 isoform X1", "gene_name": "Ralgps2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLMNGQASNVNIVATVSEKSSSSESLSDKGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPILPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSRRKSSAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRVPRNGYRSHMKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVCVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGSRMNAMLWFKHLSAACQSNRQQVPTNLMTFE", "length": 583 }, "evidence": [ { "id": "F1S6Y4", "url": "https://omabrowser.org/oma/group/F1S6Y4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BNN3-1", "protein_name": "Ral GEF with PH domain and SH3 binding motif 2", "gene_name": "RALGPS2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDLMNGQASNVNIAATASEKSSSSESLSDKGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELASCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSMAAEGALLPQTPPSPRNLIQHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRVARNGYRSHMKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGSRMNAMLWFKHLSAACQSNKQQVPTNLMTFE", "length": 583 }, "evidence": [ { "id": "F1S6Y4", "url": "https://omabrowser.org/oma/group/F1S6Y4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q0E949-1", "protein_name": "Ral GEF with PH domain and SH3 binding motif, isoform B", "gene_name": "RalGPS", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MMRYSEISRDLSTDNLRYSELSRKPTTDYNGYTGQAYAATQFKQSSPPPPPSQQQQQPTRVSKQRSPNTNGSAHTMACLRQEKTYKEQQMEPPSMQPQASKTLNIKSTRRKNSIGCLNSFSSSPDSPGCYYTIAASAAPPSKSQSLPAHASIKQLDAVILSALRVPADVLANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFWTVQEILNAEQPKQRAEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRNAFDRLSDIFSDQDNWANLRSYLESLRLPCIPYLGLFLTDLIYIDLAHPHKGGLEPEQRRNKMNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQNIFEEDQYKRSLNLEPASPSGPSSSSCSSKESFNVEVVTPALGCLNLSPAKTIGSMRMASGTKFVPGHRKCRSLGTKFRSSSLPRNFAEKCQCCIVMIAPGIGTISNKRCRCRRIFGKIATHNHSDGHPHHLHLELDPSQVQPRHHLLDDSVLEHSDALSQADLTSLESAEGIMCDFTGSDCDLMSPEAAAAMHGCVRRKTVQKEGRKPAVASWQRYWLQIWANSLVYFPPKSFKGSERNDFKREPCKVCPLDGWYAHVSDNTKHKNTFELCHRTLGTVYRFRTDSPQMTHLWSNAICKLATMRVPKPLPTNLMSFE", "length": 702 }, "evidence": [ { "id": "F1S6Y4", "url": "https://omabrowser.org/oma/group/F1S6Y4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q5ZJK0-1", "protein_name": "Ras-specific guanine nucleotide-releasing factor RalGPS1", "gene_name": "RALGPS1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDLMNGQSSSVNIAATASEKSSSSESLSDKGSAELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPEELASCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKATFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILESEQRTNLMNNILRIISDLQQSCEYDIPLLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPHSAASREDLVASEVGASPQSGRKNAAAEGALLPPTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHVPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPGTRVSRNGYRGHMKASSSLESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWVALCGTQLFYYAAKSLKATERKHFKSTPSKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLSAACQSNRQQVPANLMTFE", "length": 584 }, "evidence": [ { "id": "F1S6Y4", "url": "https://omabrowser.org/oma/group/F1S6Y4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q86X27-1", "protein_name": "Ras-specific guanine nucleotide-releasing factor RalGPS2", "gene_name": "RALGPS2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDLMNGQASSVNIAATASEKSSSSESLSDKGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPMLPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGTSTPRSAASREDLVGPEVGASPQSGRKSVAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRVARNGYRSHMKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVIGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGNRMNAMLWFKHLSAACQSNKQQVPTNLMTFE", "length": 583 }, "evidence": [ { "id": "F1S6Y4", "url": "https://omabrowser.org/oma/group/F1S6Y4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9ERD6-1", "protein_name": "Ras-specific guanine nucleotide-releasing factor RalGPS2", "gene_name": "Ralgps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLMNGQASSVTIAATVSEKSSSSESLSEKGSELKKSFDAVVFDVLKVTPEEYAGQITLMDVPVFKAIQPDELSSCGWNKKEKYSSAPNAVAFTRRFNHVSFWVVREILHAQTLKIRAEVLSHYIKTAKKLYELNNLHALMAVVSGLQSAPIFRLTKTWALLSRKDKTTFEKLEYVMSKEDNYKRLRDYISSLKMTPCIPYLGIYLSDLTYIDSAYPSTGSILENEQRSNLMNNILRIISDLQQSCEYDIPILPHVQKYLNSVQYIEELQKFVEDDNYKLSLKIEPGASTPRSAASREDLAGPDIGASPQGGRKSSAAAAAAAAAEGALLPQTPPSPRNLIPHGHRKCHSLGYNFIHKMNTAEFKSATFPNAGPRHLLDDSVMEPHAPSRGQAESSTLSSGISIGSSDGSELSEETSWPAFERNRLYHSLGPVTRVPRNGYRSHTKASSSAESEDLAVHLYPGAVTIQGVLRRKTLLKEGKKPTVASWTKYWAALCGTQLFYYAAKSLKATERKHFKSTSNKNVSVVGWMVMMADDPEHPDLFLLTDSEKGNSYKFQAGSRMNAMLWFKHLSAACQSNKQQVPTNLMTFE", "length": 590 }, "evidence": [ { "id": "F1S6Y4", "url": "https://omabrowser.org/oma/group/F1S6Y4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F1S6Y4", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "small GTPase-mediated signal transduction", "id": "GO:0007264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007264", "evidence": [ { "database": "UniProtKB", "id": "F1S6Y4", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" } ], "pmid": "" }, { "name": "regulation of Ral protein signal transduction", "id": "GO:0032485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032485", "evidence": [ { "database": "UniProtKB", "id": "F1S6Y4", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1S6Y4", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1S6Y4", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 516, "end_pos": 518, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S6Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 457, "end_pos": 569, "start_aa": "Ala", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1S6Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6Y4" }, { "id": "PS50009", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50009" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ras-GEF", "eco_id": "ECO_0000259", "start_pos": 49, "end_pos": 287, "start_aa": "Thr", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 516, "end_pos": 518 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R2D8-1", "uniprot_ac": "A0A5G2R2D8", "uniprot_id": "A0A5G2R2D8_PIG", "mass": { "chemical_mass": 20321.0, "monoisotopic_mass": 20321.0 }, "refseq": { "ac": "XP_013849043", "name": "RNA 3'-terminal phosphate cyclase-like protein isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849043" }, "gene_names": [ { "name": "RCL1", "type": "recommended", "evidence": [ { "id": "A0A5G2R2D8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2D8" } ] }, { "name": "RCL1", "type": "synonym", "evidence": [ { "id": "XP_013849043", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849043" } ] } ], "protein_names": [ { "name": "RNA 3'-terminal phosphate cyclase-like protein isoform X4", "type": "synonym", "evidence": [ { "id": "XP_013849043", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849043" } ] }, { "name": "RNA terminal phosphate cyclase like 1", "type": "synonym", "evidence": [ { "id": "A0A5G2R2D8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2D8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2D8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2D8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RCL1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2D8", "locus": {} } ], "crossref": [ { "id": "A0A5G2R2D8", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R2D8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005217", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005217", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154484", "url": "https://www.ncbi.nlm.nih.gov/gene/100154484", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000228", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000228", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013791", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013791", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013792", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013792", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016443", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016443", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2R2D8", "url": "https://www.orthodb.org/?gene=A0A5G2R2D8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11096", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11096", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11096:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11096:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05189", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05189", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013849043", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849043", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R2D8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2D8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2D8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2D8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTPLTPGCRYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETKPCGEELKGGDKVLMTCVGIGFSNLSKTLK", 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"MSTISKHFGLKYKEESYMFKELEKVRKETKKDFLLLKQKLASRLPVVEVSAFGPQIPGPVRLGEKRSVCREGPLKTSGSPRAKGPAAPDAALRQPVPRDTARPPGPSQAAAPGKTQPFCPQDFYLRSSAFLRHPPLKKPPVIASRAGTSRPVVLRPPPARREKAPARRGPRSPRPAARIPVQGPARGREASQRPAPLGKARRAPERKSSSPSSDASDASDAEAAGRRRGTIRTRFLREGSGGELRRASGSLFKTDLKSSAPSDAREAAPQTPQPARAVPTSIEEIIASLQSEAQLASDQTIQELIQSVLGRNYDIKMEDISLMGKVYWYKTPQVQAEQGLQISIKETQTNVLENVPEAVSSISQIEQEDISEWGVSDAESVLFKPQDTLEIQPTDESSKPLEGEQPIADSKAAEQMSLKVKSSELLQIKGKEVKRTRKSKLGIPQQRQTKVSKPLCDPKLPKKKIPQDYSTPTLHELCATVPAQELPIDLRLASRVYHTANKKGHSTLLGVFGTSFLDNRYTDEEQRDRILQGIPSVGDNQEHVGVLPTTPGIPAGLAPGIGQNAHKPHLLLSGEEVSAYPGFTKLFWNLTSPKFSAPVSVIKEIVYPKYESVQASRILIERFISESKESVITLNQRRKSSRFFFLRKSASFENIQKCFSTQSPELKRANSAVELKKEETVAPLKIQDDMQSDIKEVMFQKAKELEHWMAKQNETEEPAPVKEDIDTILDNIQDIHSSRDLSLSLIEASRQAGITYIVYPKKKKMKLKKGLKFSKLTVVYDELSKPPKTLTRSVSHGILPGQKKFLLRIPLYERQLRCPSLPLFLNFDKFVHSKGGIPENSDPQKWALEVLSRPEREKTATLREKVVKISVDKDLPERVKKPPPKLELSDSLKTGLPPDVIKYYESEVEILTEEINNKKKYPAFLYCRRGALYRKLGKLQSAMNDLQEAILLEPLFLNAYWHRHFIYLFQDKINEALDDLNYINRCNKNNAEAYFSRAEIFRGKNEITLAILNYTQAIKCRPTDADMYFRRGEMYEIENKVLAIDDFSKCIFYDPKRTDALFKRGIFYYENENWIAAEQDFTALLNIDPKNSQARTYRGRAYFKRHFYKQATQDFSIAIHLDPNNWLALYYRACLFRKSNPLRALQDYSVSALINDGYENLACFLHRGILYADLKLWLLAICDFEAVISLERTVTLPYINIGLIYLLHLDNYIKAIWYFSEAIRHDPSYIQGYICRAEAYHKMHKLKKAVRELSHAIHLQPDGIQLYILRGQYLLRMKRYDLAKFTIYQVAEMNKGLIELSPTQQALIYSFCENHDKAIQVLEGVIMNKPEVTMYALLAKTQMKAKRNKEAMKMFKKALDIFSHSDKGADAVAVSADCLYHLGLCYMEEGSLQMAFDSFTKAIKANPDFAEGFYQRGLCKVKLQKDSSILDFNRAINLDPKHYQAYLSRVAFYGLKGRYSKGILNCSEAIKIYPQSVRAYIYRGVLKYYNKTYKLAITDLTTAINMDKNSYIAFYNRALCYTKINELRMALTDYGIVLLLDAGGTLILNTFINRGLIYTELGQFSFALEDFKQAALMSKTNVSLCQATAMCCHRNKEFEEAVNFFTRALKIDPCFPDAYIGRGNSYMEYGHEEATKQAQKDFLKALHVNPMYTKARICLGYNLQAQGKFQKAWNHFTIAIEVDPKNYLPYEGRAVVCLQMGDYFAAIQDINAAIKINTTAEFLTNRGVIHEFMGQQQNAMRDYQAAILLNPTYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENECATMNRAIANTVLKKYEEAKEDFAHVVESCPFWAAVYFNRAYFYCCLKQYELAEEDLGKALSLKPNDALVYHLRAEVRGKIGLTEEAMADYNQALDLQEHASVV", "length": 1892, "header": "tr|A0A5G2R2G7-1|A0A5G2R2G7_PIG Isoform 1 of Tetratricopeptide repeat domain 6 OS=Sus scrofa OX=9823 GN=TTC6 PE=4 SV=2 CANONICAL=A0A5G2R2G7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R2G7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2G7/entry#A0A5G2R2G7-1", "sequence": { "sequence": "MSTISKHFGLKYKEESYMFKELEKVRKETKKDFLLLKQKLASRLPVVEVSAFGPQIPGPVRLGEKRSVCREGPLKTSGSPRAKGPAAPDAALRQPVPRDTARPPGPSQAAAPGKTQPFCPQDFYLRSSAFLRHPPLKKPPVIASRAGTSRPVVLRPPPARREKAPARRGPRSPRPAARIPVQGPARGREASQRPAPLGKARRAPERKSSSPSSDASDASDAEAAGRRRGTIRTRFLREGSGGELRRASGSLFKTDLKSSAPSDAREAAPQTPQPARAVPTSIEEIIASLQSEAQLASDQTIQELIQSVLGRNYDIKMEDISLMGKVYWYKTPQVQAEQGLQISIKETQTNVLENVPEAVSSISQIEQEDISEWGVSDAESVLFKPQDTLEIQPTDESSKPLEGEQPIADSKAAEQMSLKVKSSELLQIKGKEVKRTRKSKLGIPQQRQTKVSKPLCDPKLPKKKIPQDYSTPTLHELCATVPAQELPIDLRLASRVYHTANKKGHSTLLGVFGTSFLDNRYTDEEQRDRILQGIPSVGDNQEHVGVLPTTPGIPAGLAPGIGQNAHKPHLLLSGEEVSAYPGFTKLFWNLTSPKFSAPVSVIKEIVYPKYESVQASRILIERFISESKESVITLNQRRKSSRFFFLRKSASFENIQKCFSTQSPELKRANSAVELKKEETVAPLKIQDDMQSDIKEVMFQKAKELEHWMAKQNETEEPAPVKEDIDTILDNIQDIHSSRDLSLSLIEASRQAGITYIVYPKKKKMKLKKGLKFSKLTVVYDELSKPPKTLTRSVSHGILPGQKKFLLRIPLYERQLRCPSLPLFLNFDKFVHSKGGIPENSDPQKWALEVLSRPEREKTATLREKVVKISVDKDLPERVKKPPPKLELSDSLKTGLPPDVIKYYESEVEILTEEINNKKKYPAFLYCRRGALYRKLGKLQSAMNDLQEAILLEPLFLNAYWHRHFIYLFQDKINEALDDLNYINRCNKNNAEAYFSRAEIFRGKNEITLAILNYTQAIKCRPTDADMYFRRGEMYEIENKVLAIDDFSKCIFYDPKRTDALFKRGIFYYENENWIAAEQDFTALLNIDPKNSQARTYRGRAYFKRHFYKQATQDFSIAIHLDPNNWLALYYRACLFRKSNPLRALQDYSVSALINDGYENLACFLHRGILYADLKLWLLAICDFEAVISLERTVTLPYINIGLIYLLHLDNYIKAIWYFSEAIRHDPSYIQGYICRAEAYHKMHKLKKAVRELSHAIHLQPDGIQLYILRGQYLLRMKRYDLAKFTIYQVAEMNKGLIELSPTQQALIYSFCENHDKAIQVLEGVIMNKPEVTMYALLAKTQMKAKRNKEAMKMFKKALDIFSHSDKGADAVAVSADCLYHLGLCYMEEGSLQMAFDSFTKAIKANPDFAEGFYQRGLCKVKLQKDSSILDFNRAINLDPKHYQAYLSRVAFYGLKGRYSKGILNCSEAIKIYPQSVRAYIYRGVLKYYNKTYKLAITDLTTAINMDKNSYIAFYNRALCYTKINELRMALTDYGIVLLLDAGGTLILNTFINRGLIYTELGQFSFALEDFKQAALMSKTNVSLCQATAMCCHRNKEFEEAVNFFTRALKIDPCFPDAYIGRGNSYMEYGHEEATKQAQKDFLKALHVNPMYTKARICLGYNLQAQGKFQKAWNHFTIAIEVDPKNYLPYEGRAVVCLQMGDYFAAIQDINAAIKINTTAEFLTNRGVIHEFMGQQQNAMRDYQAAILLNPTYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENECATMNRAIANTVLKKYEEAKEDFAHVVESCPFWAAVYFNRAYFYCCLKQYELAEEDLGKALSLKPNDALVYHLRAEVRGKIGLTEEAMADYNQALDLQEHASVV", "length": 1892, "header": "tr|A0A5G2R2G7-1|A0A5G2R2G7_PIG Isoform 1 of Tetratricopeptide repeat domain 6 OS=Sus scrofa OX=9823 GN=TTC6 PE=4 SV=2 CANONICAL=A0A5G2R2G7-1" }, "locus": { "chromosome": "7", "start_pos": 62443707, "end_pos": 62228593, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085799.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085799.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068392.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068392.2" } ] } }, { "isoform_ac": "F1SHK9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2G7/entry#F1SHK9-1", "sequence": { "sequence": "MSTISKHFGLKYKEESYMFKELEKVRKETKKDFLLLKQKLASRLPVVEVSAFGPQIPGPVRLGEKRSVCREGPLKTSGSPRAKGPAAPDAALRQPVPRDTARPPGPSQAAAPGKTQPFCPQDFYLRSSAFLRHPPLKKPPVIASRAGTSRPVVLRPPPARREKAPARRGPRSPRPAARIPVQGPARGREASQRPAPLGKARRAPERKSSSPSSDASDASDAEAAGRRRGTIRTRFLREGSGGELRRASGSLFKTDLKSSAPSDAREAAPQTPQPARAVPTSIEEIIASLQSEAQLASDQTIQELIQSVLGRNYDIKMEDISLMGKVYWYKTPQVQAEQGLQISIKETQTNVLENVPEAVSSISQIEQEDISEWGVSDAESVLFKPQDTLEIQPTDESSKPLEGEQPIADSKAAEQMSLKVKSSELLQIKGKEVKRTRKSKLGIPQQRQTKVSKPLCDPKLPKKKIPQDYSTPTLHELCATVPAQELPIDLRLASRVYHTANKKGHSTLLGVFGTSFLDNRYTDEEQRDRILQGIPSVGDNQEHVGVLPTTPGIPAGLAPGIGQNAHKPHLLLSGEEVSAYPGFTKLFWNLTSPKFSAPVSVIKEIVYPKYESVQASRILIERFISESKESVITLNQRRKSSRFFFLRKSASFENIQKCFSTQSPELKRANSAVELKKEETVAPLKIQDDMQSDIKEVMFQKAKELEHWMAKQNETEEPAPVKEDIDTILDNIQDIHSSRDLSLSLIEASRQAGITYIVYPKKKKMKLKKGLKFSKLTVVYDELSKPPKTLTRSVSHGILPGQKKFLLRIPLYERQLRCPSLPLFLNFDKFVHSKGGIPENSDPQKWALEVLSRPEREKTATLREKVVKISVDKDLPERVKKPPPKLELSDSLKTGLPPDVIKYYESEVEILTEEINNKKKYPAFLYCRRGALYRKLGKLQSAMNDLQEAILLEPLFLNAYWHRHFIYLFQDKINEALDDLNYINRCNKNNAEAYFSRAEIFRGKNEITLAILNYTQAIKCRPTDADMYFRRGEMYEIENKVLAIDDFSKCIFYDPKRTDALFKRGIFYYENENWIAAEQDFTALLNIDPKNSQARTYRGRAYFKRHFYKQATQDFSIAIHLDPNNWLALYYRACLFRKSNPLRALQDYSVSALINDGYENLACFLHRGILYADLKLWLLAICDFEAVISLERTVTLPYINIGLIYLLHLDNYIKAIWYFSEAIRHDPSYIQGYICRAEAYHKMHKLKKAVRELSHAIHLQPDGIQLYILRGQYLLRMKRYDLAKFTIYQVAEMNKGLIELSPTQQALIYSFCENHDKAIQVLEGVIMNKPEVTMYALLAKTQMKAKRNKEAMKMFKKALDIFSHSDKGADAVAVSADCLYHLGLCYMEEGSLQMTYKLAITDLTTAINMDKNSYIAFYNRALCYTKINELRMALTDYGIVLLLDAGGTLILNTFINRGLIYTELGQFSFALEDFKQAALMSKTNVSLCQATAMCCHRNKEFEEAVNFFTRALKIDPCFPDAYIGRGNSYMEYGHEEATKQAQKDFLKALHVNPMYTKARICLGYNLQAQGKFQKAWNHFTIAIEVDPKNYLPYEGRAVVCLQMGDYFAAIQDINAAIKINTTAEFLTNRGVIHEFMGQQQNAMRDYQAAILLNPTYSLAYFNAGNIYFHHRQFSQASDYFSKALKFDPENECATMNRAIANTVLKKYEEAKEDFAHVVESCPFWAAVYFNRAYFYCCLKQYELAEEDLGKALSLKPNDALVYHLRAEVRGKIGLTEEAMADYNQALDLQEHASVV", "length": 1795, "header": "tr|F1SHK9-1|F1SHK9_PIG Computationally mapped isoform of Tetratricopeptide repeat domain 6 OS=Sus scrofa OX=9823 GN=TTC6 PE=4 SV=4 CANONICAL=A0A5G2R2G7-1" }, "locus": { "chromosome": "7", "start_pos": 62443707, "end_pos": 62228593, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002171.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002171.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002120.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002120.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2G7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2G7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625559", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625559", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1013, "end_pos": 1015, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1465, "end_pos": 1467, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1490, "end_pos": 1492, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1581, "end_pos": 1583, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1717, "end_pos": 1719, "annotation": "n_glycosylation_sequon" }, { "start_pos": 589, "end_pos": 591, "annotation": "n_glycosylation_sequon" }, { "start_pos": 713, "end_pos": 715, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1013, "end_pos": 1015 }, { "start_pos": 1465, "end_pos": 1467 }, { "start_pos": 1490, "end_pos": 1492 }, { "start_pos": 1581, "end_pos": 1583 }, { "start_pos": 1717, "end_pos": 1719 }, { "start_pos": 589, "end_pos": 591 }, { "start_pos": 713, "end_pos": 715 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R2H0-1", "uniprot_ac": "A0A5G2R2H0", "uniprot_id": "A0A5G2R2H0_PIG", "mass": { "chemical_mass": 29291.0, "monoisotopic_mass": 29291.0 }, "refseq": { "ac": "XP_003125917", "name": "synaptophysin-like protein 2 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125917" }, "gene_names": [ { "name": "SYPL2", "type": "recommended", "evidence": [ { "id": "A0A5G2R2H0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0" } ] }, { "name": "SYPL2", "type": "synonym", "evidence": [ { "id": "XP_003125917", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125917" } ] } ], "protein_names": [ { "name": "Synaptophysin like 2", "type": "synonym", "evidence": [ { "id": "A0A5G2R2H0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0/entry#names_and_taxonomy" } ] }, { "name": "synaptophysin-like protein 2 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003125917", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125917" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SYPL2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0", "locus": { "chromosome": "4", "start_pos": 110647796, "end_pos": 110663154, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006829", "url": "https://www.ensembl.org/id/ENSSSCG00000006829" } ] } } ], "crossref": [ { "id": "A0A5G2R2H0", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R2H0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006829", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006829", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514960", "url": "https://www.ncbi.nlm.nih.gov/gene/100514960", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001285", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001285", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514960", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514960", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VFYLRFH", "url": "https://omabrowser.org/oma/group/VFYLRFH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2R2H0", "url": "https://www.orthodb.org/?gene=A0A5G2R2H0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10306", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10306", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10306:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10306:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01284", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01284", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003125917", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125917", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AXS3", "url": "https://www.uniprot.org/uniprotkb/A0A287AXS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AXS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AXS3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2H0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSTESSSRTEDKSPRQQVDRLLVGLRWQRLEEPLGFIKVLQWLFAIFAFGCCGSYSGETGATVRCNNEAKDVSAIIVLFGYPFRLNRVQYEMPLCDDESTSKTMHLMGDFSAPAEFFVTLGIFSFFYTIAALVLYLRFHSLYTENRRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSGGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWYGQGQDQGQGTSQESAAEQGAVEKQ", "length": 264, "header": "tr|A0A5G2R2H0-1|A0A5G2R2H0_PIG Isoform 1 of Synaptophysin like 2 OS=Sus scrofa OX=9823 GN=SYPL2 PE=1 SV=2 CANONICAL=A0A5G2R2H0-1" }, "isoforms": [ { "isoform_ac": "A0A287AXS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0/entry#A0A287AXS3-1", "sequence": { "sequence": "MSSTESSSRTEDKSPRQQVDRLLVGLRWQRLEEPLGFIKVLQWLFAIFAFGCCGSYSGETGATVRCNNEAKDVSAIIVLFGYPFRVGSLPPRRLNRVQYEMPLCDDESTSKTMHLMGDFSAPAEFFVTLGIFSFFYTIAALVLYLRFHSLYTENRRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSGGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWYGQGQDQGQGTSQESAAEQGAVEKQ", "length": 272, "header": "tr|A0A287AXS3-1|A0A287AXS3_PIG Computationally mapped isoform of Synaptophysin like 2 OS=Sus scrofa OX=9823 GN=SYPL2 PE=1 SV=2 CANONICAL=A0A5G2R2H0-1" }, "locus": { "chromosome": "4", "start_pos": 110662943, "end_pos": 110650445, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037596.2", "url": "https://www.ensembl.org/id/ENSSSCT00000037596.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048683.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048683.2" } ] } }, { "isoform_ac": "A0A5G2R2H0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0/entry#A0A5G2R2H0-1", "sequence": { "sequence": "MSSTESSSRTEDKSPRQQVDRLLVGLRWQRLEEPLGFIKVLQWLFAIFAFGCCGSYSGETGATVRCNNEAKDVSAIIVLFGYPFRLNRVQYEMPLCDDESTSKTMHLMGDFSAPAEFFVTLGIFSFFYTIAALVLYLRFHSLYTENRRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSGGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWYGQGQDQGQGTSQESAAEQGAVEKQ", "length": 264, "header": "tr|A0A5G2R2H0-1|A0A5G2R2H0_PIG Isoform 1 of Synaptophysin like 2 OS=Sus scrofa OX=9823 GN=SYPL2 PE=1 SV=2 CANONICAL=A0A5G2R2H0-1" }, "locus": { "chromosome": "4", "start_pos": 110662943, "end_pos": 110650445, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090560.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090560.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071386.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071386.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", 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N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514960", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514960", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AA56-1", "protein_name": "Synaptophysin like 2", "gene_name": "SYPL2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAESGAPSGGDKAPRLQDRVLAGMRWGRLQEPLGFVKVLEWLFAIFAFGACGSFSGESGATVKCSGETKEMSAISVQFGYPFRLYQIPFEMPECDGESEPRTLHLVGDFSAPAEFFVTLGVFSFLYAMAALVLYLRFHSLYADNKKLPFTDFCVTVCFAFFWLVAAAAWGKGLSDVKAATRPSSLIAAMSVCQGHDVVCNAGATPAMGLANISVLFGFINFLLWAGNCWFVFKETTWHTQAEPRGDSAAEQGAIDKQ", "length": 257 }, "evidence": [ { "id": "A0A5G2R2H0", "url": "https://omabrowser.org/oma/group/A0A5G2R2H0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A6M0-1", "protein_name": "Synaptophysin-like 2", "gene_name": "Sypl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTESPGRTSDKSPRQQVDRLLLGLRWQRLEEPLGFIKVLQWLFAIFAFGSCGSYSGETGALVRCNNDPKDVSSIIVLFGYPFRLYQVQYEMPLCDEESTSKTMNLMGDFSAPAEFFVTLGIFSFFYTMAALVIYLRFHKVYTENKRFPLVDFCVTVSFTFFWLVAAAAWGKGLTDVKGATRPSSLTAAMSVCHGEEAVCSAGATPSMGLANISVLFGFINFFLWAGNCWFVFKETPWHGQGQDQGQGPSQESAAEQGAVEKQ", "length": 264 }, "evidence": [ { "id": "A0A5G2R2H0", "url": "https://omabrowser.org/oma/group/A0A5G2R2H0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O89104-1", "protein_name": "Synaptophysin-like protein 2", "gene_name": "Sypl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"https://omabrowser.org/oma/group/A0A5G2R2H0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0" } ], "pmid": "" }, { "name": "synaptic vesicle", "id": "GO:0008021", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008021", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0" } ], "pmid": "" }, { "name": "synaptic vesicle membrane", "id": "GO:0030672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030672", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2H0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { 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"date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R2J3-1", "uniprot_ac": "A0A5G2R2J3", "uniprot_id": "A0A5G2R2J3_PIG", "mass": { "chemical_mass": 12134.0, "monoisotopic_mass": 12134.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "A0A5G2R2J3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J3", "locus": {} } ], "crossref": [ { "id": "A0A5G2R2J3", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R2J3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000051765", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000051765", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "A0A5G2R2J3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2J3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMAILTGVKWYLTVVLICISLIITDIEHFFMCLFPICISSLEKCLFRSSAQFSIGLLVFLLMSYINCLCILEIKTLSFASFETIFSHSVGCLFVFLLQFSLLYKSF", "length": 106, "header": "tr|A0A5G2R2J3-1|A0A5G2R2J3_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A5G2R2J3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R2J3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J3/entry#A0A5G2R2J3-1", "sequence": { "sequence": 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"sequence": { "sequence": "MSEEACRTRSQKRAFEPDLTEDDVESKKMKMERGPSELPVDGDSRVMPEPSAGPAQGLLRTTEAMGTGSGEGLLGDGPVDMRTSHSDMKSEKRPPSPDVIVLSDSEQPSSPRVNGLTTVALKDTSTEALLKSSPEERERMIKQLKEELRLEEAKLVLLKKLRQSQIQKEATAQKPTASSGSTVTTPPPLVRGPQNIPAGKPSLQTSSTRIPGSIIPPPLVRGGQQVSAKLGPQASSQVVMPPLVRGAQVSQIHNIRQHSSTGPPPLLLAPRASVPSMQIQGQRIIQQGLIRVANVPNTSLLVNIPQPTAASLKGTTVGSAQANSTPSSVASVVASAESPASRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLETQAGRISATSAAAVLSREPYMCVQCKTDFTCRWREKGGAVMCENCMTSNQKKALKVEHTSRLKAAFVKALQQEQEMEQRLLQQGVGTASIKAETAAPHPSLKQVIKPRRKLAFRSGEARDWNNGSVLQTSSQLSRGSATTPRGVLHTFSQSPKLQNAASATALVSRTGRHSERVVGTSKGTASNWKKTPLSTGGTLAFVSPSLAVHKSSSAVDRQREYLLDMIPPRSIPQSATWK", "length": 632 }, "evidence": [ { "id": "A0A5G2R2J4", "url": "https://omabrowser.org/oma/group/A0A5G2R2J4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CHY6-1", "protein_name": "Transcriptional repressor p66 alpha", "gene_name": "Gatad2a", "tax_id": 10090, "organism": "Mus musculus", 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II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" }, { "name": "chromatin remodeling", "id": "GO:0006338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006338", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" }, { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "NuRD complex", "id": "GO:0016581", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016581", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2J4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 305, "end_pos": 307, "annotation": "n_glycosylation_sequon" }, { "start_pos": 331, "end_pos": 333, "annotation": "n_glycosylation_sequon" }, { "start_pos": 585, "end_pos": 587, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2R2J4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 640, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2R2J4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2R2J4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2R2J4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2J4" }, { "id": "PS50114", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50114" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GATA-type", "eco_id": "ECO_0000259", "start_pos": 418, "end_pos": 448, "start_aa": "Ser", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 305, "end_pos": 307 }, { "start_pos": 331, "end_pos": 333 }, { "start_pos": 585, "end_pos": 587 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R4F0-1", "uniprot_ac": "A0A5G2R4F0", "uniprot_id": "A0A5G2R4F0_PIG", "mass": { "chemical_mass": 123873.0, "monoisotopic_mass": 123873.0 }, "refseq": {}, "gene_names": [ { "name": "TEX2", "type": "recommended", "evidence": [ { "id": "A0A5G2R4F0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0" } ] } ], "protein_names": [ { "name": "Testis expressed 2", "type": "synonym", "evidence": [ { "id": "A0A5G2R4F0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": 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"https://www.ebi.ac.uk/interpro/entry/IPR031468", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KRWNTGA", "url": "https://omabrowser.org/oma/group/KRWNTGA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13466", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13466", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13466:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13466:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "R-SSC-8980692", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R2L3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2L3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2L3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2L3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4F0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4F0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCY2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCY2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCY2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCY2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RSL6", "url": "https://www.uniprot.org/uniprotkb/F1RSL6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RSL6-1", "url": "https://www.uniprot.org/uniprotkb/F1RSL6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSLNGRHAEKTIDMPKPSAPRVHVQRSVSRDTIAIHFSASGEEEEEEEEEFREYLGEGLDDQSVVTGLEAKEDLYLEPRGGHDPILAEALSVPSAVLPVSVHTVKLLEPPPPAAQVLSTVPLALSPGSSSSGPFASSPSVSSLSEQKTSSSSPLSSPSKSPVLSASASSSTLSSAKPFMSLVKSLSTEVEPKESTHPPRHRHLMKTLVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYDPFQLFSKIIGEESGSHRPKALSSSASELSNLSSLNGHLESNNNYSIKEEECDSEGEGLGSDPGEPSREAEPRSSQGSSLKDLGLKTSSLVLEKCSLSALVSKEDEEFCELYTEDFDLETEGESKVEKLPEVPLKPEVLAAEGPALDSDHEVDSARQHPELPVKTLGIFVLCVYGYLILPLPHYVSGLFLGIGLGFMTAVCVIWFFTPPSAHKYHRLHKNLQHWNPRSLDIKEPEMLKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKVYLVPKSLARKRIWNKKYPICIELGRQDDFMSKAQPDKETSEEKPPAERELGGEDPKKPPHPQERTRSGQRDQILYLFGRTGREKEEWFQRFILASKLKSDIKKPPGVSGSKPGVLPSHSRHSSPSGHLTHSRSSSKGSVDEIMSQPKQKELVGSVRQKMLLDYSVYMARCVPQESRSPKGAPYFLANFGPFSCCQLPEAPPSEEEEQEAWVNALLGRMFWDFLGEKYWSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAMPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRAFCLADSDEESSSAGSSDEDDAPEPSAGTSRFSQGRKGEYVGGHRTSKIMRLVDKITKSKYFQKATETEFIKKKMEEVSNTPLLLTVEVQECRGTLAVNIPPPATDRIWYGFRKPPYIELKARPKLGEREVTLVHVTDWIEKKLEQEFQKVFVMPNMDDVYIPIMHSAMDPRSTSSLLKDPPVEAADQL", "length": 1111, "header": "tr|A0A5G2R4F0-1|A0A5G2R4F0_PIG Isoform 1 of Testis expressed 2 OS=Sus scrofa OX=9823 GN=TEX2 PE=4 SV=1 CANONICAL=A0A5G2R4F0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R2L3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0/entry#A0A5G2R2L3-1", "sequence": { "sequence": "MTAVCVIWFFTPPSAHKYHRLHKNLQHWNPRSLDIKEPEMLKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKVYLVPKSLARKRIWNKKYPICIELGRQDDFMSKAQPDKETSEEKPPAERELGGEDPKKPPHPQERTRSGQRDQILYLFGRTGREKEEWFQRFILASKLKSDIKKPPGVSGSKPGVLPSHSRHSSPSGHLTHSRSSSKGSVDEIMSQPKQKELVGSVRQKMLLDYSVYMARCVPQESRSPKGAPYFLANFGPFSCCQLPEAPPSEEEEQEAWVNALLGRMFWDFLGEKYWSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAMPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGPRAFCLADSDEESSSAGSSDEDDAPEPSAGTSRFSQGRKGEYVGGHRTSKIMRLVDKITKSKYFQKATETEFIKKKMEEVSNTPLLLTVEVQECRGTLAVNIPPPATDRIWYGFRKPPYIELKARPKLGEREVTLVHVTDWIEKKLEQEFQKVFVMPNMDDVYIPIMHSAMDPRSTSSLLKDPPVEAADQL", "length": 623, "header": "tr|A0A5G2R2L3-1|A0A5G2R4F0_PIG Computationally mapped isoform of Testis expressed 2 OS=Sus scrofa OX=9823 GN=TEX2 PE=4 SV=2 CANONICAL=A0A5G2R4F0-1" }, "locus": { "chromosome": "12", "start_pos": 14865341, "end_pos": 14808182, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074258.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074258.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070581.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070581.2" } ] } }, { "isoform_ac": "A0A5G2R4F0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0/entry#A0A5G2R4F0-1", "sequence": { "sequence": "MTSLNGRHAEKTIDMPKPSAPRVHVQRSVSRDTIAIHFSASGEEEEEEEEEFREYLGEGLDDQSVVTGLEAKEDLYLEPRGGHDPILAEALSVPSAVLPVSVHTVKLLEPPPPAAQVLSTVPLALSPGSSSSGPFASSPSVSSLSEQKTSSSSPLSSPSKSPVLSASASSSTLSSAKPFMSLVKSLSTEVEPKESTHPPRHRHLMKTLVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYDPFQLFSKIIGEESGSHRPKALSSSASELSNLSSLNGHLESNNNYSIKEEECDSEGEGLGSDPGEPSREAEPRSSQGSSLKDLGLKTSSLVLEKCSLSALVSKEDEEFCELYTEDFDLETEGESKVEKLPEVPLKPEVLAAEGPALDSDHEVDSARQHPELPVKTLGIFVLCVYGYLILPLPHYVSGLFLGIGLGFMTAVCVIWFFTPPSAHKYHRLHKNLQHWNPRSLDIKEPEMLKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKVYLVPKSLARKRIWNKKYPICIELGRQDDFMSKAQPDKETSEEKPPAERELGGEDPKKPPHPQERTRSGQRDQILYLFGRTGREKEEWFQRFILASKLKSDIKKPPGVSGSKPGVLPSHSRHSSPSGHLTHSRSSSKGSVDEIMSQPKQKELVGSVRQKMLLDYSVYMARCVPQESRSPKGAPYFLANFGPFSCCQLPEAPPSEEEEQEAWVNALLGRMFWDFLGEKYWSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAMPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRAFCLADSDEESSSAGSSDEDDAPEPSAGTSRFSQGRKGEYVGGHRTSKIMRLVDKITKSKYFQKATETEFIKKKMEEVSNTPLLLTVEVQECRGTLAVNIPPPATDRIWYGFRKPPYIELKARPKLGEREVTLVHVTDWIEKKLEQEFQKVFVMPNMDDVYIPIMHSAMDPRSTSSLLKDPPVEAADQL", "length": 1111, "header": "tr|A0A5G2R4F0-1|A0A5G2R4F0_PIG Isoform 1 of Testis expressed 2 OS=Sus scrofa OX=9823 GN=TEX2 PE=4 SV=1 CANONICAL=A0A5G2R4F0-1" }, "locus": { "chromosome": "12", "start_pos": 14865341, "end_pos": 14806692, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074515.1", "url": "https://www.ensembl.org/id/ENSSSCT00000074515.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065437.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065437.1" } ] } }, { "isoform_ac": "A0A8W4FCY2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0/entry#A0A8W4FCY2-1", "sequence": { "sequence": "MTAVCVIWFFTPPSAHKYHRLHKNLQHWNPRSLDIKEPEMLKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKVYLVPKSLARKRIWNKKYPICIELGRQDDFMSKAQPDKETSEEKPPAERELGGEDPKKPPHPQERTRSGQRDQILYLFGRTGREKEEWFQRFILASKLKSDIKKPPGVSGSKPGVLPSHSRHSSPSGHLTHSRSSSKGSVDEIMSQPKQKELVGSVRQKMLLDYSVYMARCVPQESRSPKGAPYFLANFGPFSCCQLPEAPPSEEEEQEAWVNALLGRMFWDFLGEKYWSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAMPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRAFCLADSDEESSSAGSSDEDDAPEPSAGTSRFSQGRKGEYVGGHRTSKIMRLVDKITKSKYFQKATETEFIKKKMEEVSNTPLLLTVEVQECRGTLAVNIPPPATDRIWYGFRKPPYIELKARPKLGEREVTLVHVTDWIEKKLEQEFQKVFVMPNMDDVYIPIMHSAMDPRSTSSLLKDPPVEAADQL", "length": 625, "header": "tr|A0A8W4FCY2-1|A0A8W4FCY2_PIG Computationally mapped isoform of Testis expressed 2 OS=Sus scrofa OX=9823 GN=TEX2 PE=4 SV=1 CANONICAL=A0A5G2R4F0-1" }, "locus": { "chromosome": "12", "start_pos": 14865341, "end_pos": 14808182, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106905.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106905.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077124.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077124.1" } ] } }, { "isoform_ac": "F1RSL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0/entry#F1RSL6-1", "sequence": { "sequence": "MTSLNGRHAEKTIDMPKPSAPRVHVQRSVSRDTIAIHFSASGEEEEEEEEEFREYLGEGLDDQSVVTGLEAKEDLYLEPRGGHDPILAEALSVPSAVLPVSVHTVKLLEPPPPAAQVLSTVPLALSPGSSSSGPFASSPSVSSLSEQKTSSSSPLSSPSKSPVLSASASSSTLSSAKPFMSLVKSLSTEVEPKESTHPPRHRHLMKTLVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYDPFQLFSKIIGEESGSHRPKALSSSASELSNLSSLNGHLESNNNYSIKEEECDSEGEGLGSDPGEPSREAEPRSSQGSSLKDLGLKTSSLVLEKCSLSALVSKEDEEFCELYTEDFDLETEGESKVEKLPEVPLKPEVLAAEGPALDSDHEVDSARQHPELPVKTLGIFVLCVYGYLILPLPHYVSGLFLGIGLGFMTAVCVIWFFTPPSAHKYHRLHKNLQHWNPRSLDIKEPEMLKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKVYLVPKSLARKRIWNKKYPICIELGRQDDFMSKAQPDKETSEEKPPAERELGGEDPKKPPHPQERTRSGQRDQILYLFGRTGREKEEWFQRFILASKLKSDIKKPPGVSGSKPGVLPSHSRHSSPSGHLTHSRSSSKGSVDEIMSQPKQKELVGSVRQKMLLDYSVYMARCVPQESRSPKGAPWRVWLPGLALQGEWRTAGGGREPVTGVKGLRLRWSEQL", "length": 816, "header": "tr|F1RSL6-1|F1RSL6_PIG Computationally mapped isoform of Testis expressed 2 OS=Sus scrofa OX=9823 GN=TEX2 PE=4 SV=3 CANONICAL=A0A5G2R4F0-1" }, "locus": { "chromosome": "12", "start_pos": 14829288, "end_pos": 14806692, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018810.4", "url": "https://www.ensembl.org/id/ENSSSCT00000018810.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018308.4", "url": "https://www.ensembl.org/id/ENSSSCP00000018308.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2L3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2L3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MJA6-1", "protein_name": "Testis expressed 2", "gene_name": "TEX2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTSLNGRHAEKTLDMPKPSAPRVHVQRSVSRDTIAIHFSVSGEEEEEEEEEFRELLEEGLDDQTVVTGLEAKEDLYLEPGGGHDPAGPGAQLILADGLSVSPAVVPVSENTVKLLEPPAPAAQVFGTVPLALSPGSSSSGPIASSPSVSSLSEQKTSSSSPLSSPSRSPILSSSASSSTLSSAKPFLSLVKSLSTEVEPKESPHPPRHRHLMKTLVKSLSTDTSRQESDAVSYRPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYDPFQLFSKIIGEESGSHRPKALSSSASELSNLSSLNGHLESNNNYSIKEEECDSEGEGMGSDPGVPRSDQPQSSEEPAREAEPRSSQGSGLKEGGPKTSSLVLEKCSLSALASKEDEEFCELYTEDFDLEPEGESKAEKLPEGPLKPEGLADDGPALDSDHEVDSAAQQLELPVKTLGCFVLCVYAYLILPLPHYVSGLFLGVGLGFMTAVCLIWFFTPPSAHKHHRLHKHLQHWNPRSLDIKEPEILKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKVYLVPKSLARKRIWNKKYPICIELGQQDDFMSKAQTDKETCEEKPPAERELGGEDPKKPPHPQEGTRSGHRDQILYLFGRTGREKEEWFRRFILASKPKSETKKPSGVSGSKAGVLPSHSRHSSPSGHLTHSRSSSKGSVDELVAQPKQKELVGGVRQKMLLDYSVYMARCVPQENRSPQRSPVQSAESSPTAGKKLPEVPPSEEEEQEAWVNALLGRMFWDFLGEKYWSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAVPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRAFCLADSDEESSSAGSSDEDDAPEPSAGDKPLLPGAEGYVGGHRTSKIMRFVDKITKSKYFQKATETEFIKKKIEEVSNTPLLLTVEVQECRGTLAVNIPPPATDRIWYGFRKPPYIELKARPKLGEREVTLVHVTDWIEKKLEQEFQKVFVMPNMDDVYIPIMHSAMDPRSTSSLLKDPPVEAPDQL", "length": 1128 }, "evidence": [ { "id": "A0A5G2R4F0", "url": "https://omabrowser.org/oma/group/A0A5G2R4F0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HCT9-1", "protein_name": "Testis-expressed protein 2", "gene_name": "Tex2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTSLNGRHAEKTIDMPKPSAPKVHVQRSVSRDTIAIHFSASGEEEEEEEEEFRGYLEEGLNDQSIVTGLEAKEDLYLETQGGHDPGGPAAATIPADGLSVSETPAILPVSENTVKLLESPAPAIQVLSTVPLALSPGSSSSGPLASSPSVSSLSEQKTTSSSPLSSPSKSPVLSASASSSALSSAKPFMSLVKSLSTEVEPKESPHPPRHRHLMKTLVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYEPFQLLSKIIGEESGSHRPKALSSSASELSNLSSLNGHLESNNNYSIKEEEGDSEGDGYGSDSNTPRSGHPKPTEEAVKEVEPKGSQGSNLKDLGVKTSTLVLERCSLSALVSKEDEEFCELYTEDFELEAEGEGRLDKPLDGPLKPEVLADDGMVLDSEGDDRDSATQHQELPVKTLGFFVMCVYAYLILPLPHYVSGLFLGIGLGFMTAVCMIWFFTPPSAHKYHKSHKTLRHWYTRSLDIKEPEILKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPDVTYISQKIYDLSDSKIYLVPKSLARKRIWNKKYPICIELGQQDDFMSKAQTDRDTCEEKPPAEKELASEDLKKPTQPQEGTKSSQRDLILYLFGRTGREKEEWFRRFILASKLKSDLKKPPGVSGSKSGLLPTHSRHSSPSGHLTHSRSSSKGSVEEMMSQPKQKELVGSVRQKVLLDYSVYMGRCVPQDDRSPHRSPVQSAESSPTAGKKLPEAPPTEEEEQEAWVNALLGRIFWDFLGEKYWSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAVPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRVYCLADSDEESSSAGSSEEDDAPEPSAGDKQPLPGTEGYVGGHRTSKIMRFVDKITKSKYFQKATETEFIKKKIEEVSNTPLLLTVEVQECRGTLAVNIPPPPTDRIWYGFRKPPYVELKARPKLGEREVTLVHVTEWIEKKLEQEFQKVFVMPNMDDVYIPLMHSAMDPRSTSCFLKDPPVEASDQL", "length": 1131 }, "evidence": [ { "id": "A0A5G2R4F0", "url": "https://omabrowser.org/oma/group/A0A5G2R4F0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3V9L1-1", "protein_name": "Testis expressed 2", "gene_name": "Tex2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTSLNGRHAEKTIDMPKPSAPKVHVQRSVSRDTIAIHFSASGEEEEEEEEELRGYLEEGLDDQSIVTGLEAKEDLYLEPQGGHDPAGPAVATAPADGLSVSETPAILPVSENTVKLLEPPAPAVQVLSPVPLALSPGSSSSGPLASSPSVSSLSEQKTSSSSPLSSPSKSPVLSSSASSSALSSAKPFMSLVKSLSTEVEPKESPHPPRHRHLMKTLVKSLSTDTSRQESDSVSYKAPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYEPFQLLSKIMGEESGSHRPKALSSSASELSNLSSLNGHLESNNYSIKEEEGDSEGDDYGSDSNTPRTDHLKPSEDASKEGEPKGSQASSLKTSSLVLEKCSLSALVSKEDEEFCELYTEDFELEAEGEGRLDKPPDIPLKPEVPASEGVALDSEDEEDPGSEHPELPVKTLSFFILCVYAYLILPLPYYMSGLFLGLGLGFMTAVCMIWFFTPPSAHKYHRSHKALRHRNSRSLDIREPEILKGWMNEIYSYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKIYLVPKSLARKRIWNKKYPICIELGRQDDFMSKAQTDKEAGEEKLPPERELASEDLKKPPQPQEGTKSSQRDPILYLFGRTGREKEEWFRRFTLASKLKSDLKKSSGVSGSKSGLLPAHSRHSSPSGHLSHSRSSSKGSMEEMMPQPKQKELLGGVRQKMLLDYSVYMGRCVPQDGQSPHRSPVQSAESSPTAGKKLPEAPPSEEEEQEAWVNALLGRIFWDFLGEKYWSDVVSKKIQMKLSKIKLPYFMNELTLTELDMGVAVPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRAYCLADSDEESSSAGSSEEDDPPEPSAGDKQPLPGAEGYVGGHRTSKIMRFVDKITKSKYFQKATETEFIKKKMEEVSNTPLLLTVEVQECRGTLAVNIPPPPTDRMWYGFRKPPYVELKARPKLGEREVTLVHVTEWIEKKLEQELQKVFVMPNMDDVYIPIMHSAMDPRSTSCLLKEPPVEASD", "length": 1122 }, "evidence": [ { "id": "A0A5G2R4F0", "url": "https://omabrowser.org/oma/group/A0A5G2R4F0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6ZPJ0-1", "protein_name": "Testis-expressed protein 2", "gene_name": "Tex2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLNGRHAEKTIDMPKPSAPKVHVQRSVSRDTIAIHFSASGEEEEEEEEEFRGYLEEGLDDQSIVTGLEAKEDLYLESQGGHDPAGPVSTAPADGLSVSESPAILPVSENTVKLLESPAPALQVLSPVPLALSPGSSSSGPLASSPSVSSLSEQKTSSSSPLSSPSKSPVLSSSASSSALSSAKPFMSLVKSLSTEVEPKESPHPPRHRHLMKTLVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYEPFQLLSKIIGEESGSHRPKALSASASELSSLSGLNGHLESNNYSIKEEEGDSEGEGYGSDSNTSRSDHLKPTEDASKEVEPKGSQASSLKDLGLKTSSLVLEKCSLSALVSKEDEEFCELYTEDFELETEGEGRLDKTLDLPLKPEVLASDGVALESEDEEDSATEHQELPVKTLGFFIMCVYAYLILPLPYYMSGLFLGVGLGFMTAVCMIWFFTPPSAHKHHKSLKALRHQSTRSLDIKEPEILKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNETKPEVTYISQKIYDLSDSKIYLVPKSLARKRIWNKKYPICIELGRQDDFMSKAQSDKEATEEKPPPEKELPSEDLKKPPQPQEGTKSSQRDPILYLFGRTGREKEEWFRRFILASRLKSELRKPAGVSGSKSGLLPAHSRHSSPSGHLSHSRSSSKGSVEEMMSQPKQKELVGSVRQKMLLDYSVYMGRCVPQDNRSPHRSPVQSAESSPTASKKLPEAPPSEEEEQEAWVNALLGRIFWDFLGEKYWSDVVSKKIQMKLSKIKLPYFMNELTLTELDMGVAVPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRAYCLADSDEESSSAGSSEEDDPPEPTAGDKQPLPGAEGYVGGHRTSKIMRFVDKITKSKYFQKATETEFIKKKIEEVSNTPLLLTVEVQECRGTLAVNIPPPPTDRIWYGFRKPPYVELKARPKLGEREVTLVHVTEWIEKKLEQELQKVFVMPNMDDVYIPIMHSAMDPRSTSCLLKEPPVETSDQL", "length": 1128 }, "evidence": [ { "id": "A0A5G2R4F0", "url": "https://omabrowser.org/oma/group/A0A5G2R4F0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IWB9-1", "protein_name": "Testis-expressed protein 2", "gene_name": "TEX2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSLYGRHAEKTTDMPKPSAPKVHVQRSVSRDTIAIHFSASGEEEEEEEEEFREYFEEGLDDQSIVTGLEAKEDLYLEPQVGHDPAGPAASPVLADGLSVSQAPAILPVSKNTVKLLESPVPAAQVLSTVPLAVSPGSSSSGPLASSPSVSSLSEQKTSSSSPLSSPSKSPILSSSASTSTLSSAKPFMSLVKSLSTEVEPKESPHPARHRHLMKTLVKSLSTDTSRQESDTVSYKPPDSKLNLHLFKQFTQPRNTGGDSKTAPSSPLTSPSDTRSFFKVPEMEAKIEDTKRRLSEVIYEPFQLLSKIIGEESGSHRPKALSSSASELSNLSSLNGHLESNNNYSIKEEECDSEGDGYGSDSNIPRSDHPKSTGEPTREIELKSSQGSSLKDLGLKTSSLVLEKCSLSALVSKEDEEFCELYTEDFDLETEGESKVDKLSDIPLKPEVLAEDGVVLDSEDEVDSAVQHPELPVKTLGFFIMCVYVYLILPLPHYVSGLFLGIGLGFMTAVCVIWFFTPPSAHKYHKLHKNLRHWNTRSLDIKEPEILKGWMNEIYNYDPETYHATLTHSVFVRLEGGTLRLSKPNKNISRRASYNEPKPEVTYISQKIYDLSDSKIYLVPKTLARKRIWNKKYPICIELGQQDDFMSKAQTDKETSEEKPPAEGSEDPKKPPRPQEGTRSSQRDQILYLFGRTGREKEEWFRRFILASKLKSEIKKSSGVSGGKPGLLPAHSRHNSPSGHLTHSRSSSKGSVEEIMSQPKQKELAGSVRQKMLLDYSVYMGRCVPQESRSPQRSPLQSAESSPTAGKKLPEVPPSEEEEQEAWVNALLGRIFWDFLGEKYWSDLVSKKIQMKLSKIKLPYFMNELTLTELDMGVAVPKILQAFKPYVDHQGLWIDLEMSYNGSFLMTLETKMNLTKLGKEPLVEALKVGEIGKEGCRPRAFCLADSDEESSSAGSSEEDDAPEPSGGDKQLLPGAEGYVGGHRTSKIMRFVDKITKSKYFQKATETEFIKKKIEEVSNTPLLLTVEVQECRGTLAVNIPPPPTDRVWYGFRKPPHVELKARPKLGEREVTLVHVTDWIEKKLEQEFQKVFVMPNMDDVYITIMHSAMDPRSTSCLLKDPPVEAADQP", 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"A0A5G2R4F0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4F0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4F0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 321, "end_pos": 323, "annotation": "n_glycosylation_sequon" }, { "start_pos": 334, "end_pos": 336, "annotation": "n_glycosylation_sequon" }, { "start_pos": 567, "end_pos": 569, "annotation": "n_glycosylation_sequon" }, { "start_pos": 575, "end_pos": 577, "annotation": "n_glycosylation_sequon" }, { "start_pos": 884, "end_pos": 886, "annotation": "n_glycosylation_sequon" }, { "start_pos": 896, "end_pos": 898, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"MEQKSGLEDGPELEQEEGEPEVKKRRLLCVEFASVATCDAAVAQCYLAENDWEMERALNSYFEPAVEENALKSRPETPNEPESCVDLTKEETSDSFSCKTSTSENVQQEDGSVFSFITWNIDGLDLNSLLERARGVCSYLALYSPDVIFLQEVIPPYYTYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVHVSVSGNELCLMTSHLESTRGHAEERMNQLKMVLKKMQEAPESATVIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQMNSNLGIAATCKLRFDRIFFRAAAEGSHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDVIL", "length": 362, "header": "tr|A0A5G2R2R0-1|A0A5G2R2R0_PIG Isoform 1 of Tyrosyl-DNA phosphodiesterase 2 OS=Sus scrofa OX=9823 GN=TDP2 PE=3 SV=1 CANONICAL=A0A5G2R2R0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R2R0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2R0/entry#A0A5G2R2R0-1", "sequence": { "sequence": 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[], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2R0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2R0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157860", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157860", "resource": "KEGG Pathway" }, { "id": "R-SSC-5693571", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5693571", "resource": "Reactome", "description": "Nonhomologous End-Joining (NHEJ)" } ], "orthologs": [ { "uniprot_canonical_ac": "A7YWI9-1", "protein_name": "Tyrosyl-DNA phosphodiesterase 2", "gene_name": "TDP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MERNSGPEAGPEAELEEGEPEVKKRKLMCVEFASVASCDAAVAQCYLAENDWEMERALNSYFEPAVEESASESRPESLSEPGSCVDLTKEETNDSISSKTSTSEDKSVQQEDGSVFSFITWNIDGLDMNNLLERARGVCSYLTLYSPDVIFLQEVIPPYYAYLKKKASSYKIITGREEGYFTAIMLKKSRVKFKSQEIIPFPNTQMMRNLLCVHVSVSGNELCLMTSHLESTRGHAKERMNQFKMVLEKMQEAPGSATVIFAGDTNLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYTWDTQMNSNLGIAANCKLRFDRIFFRAAAEGGHIIPQSLDLLGLEKLDCGRFPSDHWGLLCTLDVIL", "length": 364 }, "evidence": [ { "id": "A0A5G2R2R0", "url": "https://omabrowser.org/oma/group/A0A5G2R2R0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": 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"RAPGGGRCCPEQEEGESAAGGSGAGGDSAIEQGGQGCALAPSPVSGVRREGARGGGRGRGRWKQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGDGGGGGCGSSGGGGAPRREPVPFPSGSAGPGPRGPRATESGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQRLRNDPLNQNKLRWTARHPAPWHVLSRFRLLMCCFLCLECAPLPLHLVNCYSSKAQLHCLHLCEACSALSKQNRSLLP", "length": 299, "header": "tr|A0A5G2R340-1|A0A5G2R340_PIG Isoform 1 of Methyl-CpG binding domain protein 2 OS=Sus scrofa OX=9823 GN=MBD2 PE=1 SV=2 CANONICAL=A0A5G2R340-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R340-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340/entry#A0A5G2R340-1", "sequence": { "sequence": "RAPGGGRCCPEQEEGESAAGGSGAGGDSAIEQGGQGCALAPSPVSGVRREGARGGGRGRGRWKQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGDGGGGGCGSSGGGGAPRREPVPFPSGSAGPGPRGPRATESGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQRLRNDPLNQNKLRWTARHPAPWHVLSRFRLLMCCFLCLECAPLPLHLVNCYSSKAQLHCLHLCEACSALSKQNRSLLP", "length": 299, "header": "tr|A0A5G2R340-1|A0A5G2R340_PIG Isoform 1 of Methyl-CpG binding domain protein 2 OS=Sus scrofa OX=9823 GN=MBD2 PE=1 SV=2 CANONICAL=A0A5G2R340-1" }, "locus": { "chromosome": "1", "start_pos": 103752203, "end_pos": 103735990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072184.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072184.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071505.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071505.2" } ] } }, { "isoform_ac": "A0A5G2R967-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340/entry#A0A5G2R967-1", "sequence": { "sequence": "MRAHGGGRCCPEQEEGESAAGGSGAGGDSAIEQGGQGCALAPSPVSGVRREGARGGGRGRGRWKQAGRGGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGDGGGGGCGSSGGGGAPRREPVPFPSGSAGPGPRGPRATESGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQRLRNDPLNQNKFVCTFPL", "length": 240, "header": "tr|A0A5G2R967-1|A0A5G2R967_PIG Computationally mapped isoform of Methyl-CpG binding domain protein 2 OS=Sus scrofa OX=9823 GN=MBD2 PE=1 SV=2 CANONICAL=A0A5G2R340-1" }, "locus": { "chromosome": "1", "start_pos": 103752208, "end_pos": 103736196, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090999.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090999.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072869.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072869.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "DNA methylation-dependent constitutive heterochromatin formation", "id": "GO:0006346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006346", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "methyl-CpG binding", "id": "GO:0008327", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008327", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "siRNA binding", "id": "GO:0035197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035197", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "C2H2 zinc finger domain binding", "id": "GO:0070742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070742", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "heterochromatin", "id": "GO:0000792", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000792", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "NuRD complex", "id": "GO:0016581", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016581", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" }, { "name": "histone deacetylase complex", "id": "GO:0000118", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000118", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R340", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2R340-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 299, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2R340-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2R340" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2R340", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R340" }, { "id": "PS50982", "database": "PROSITE", "url": 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[ { "id": "A0A5G2R350", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R350/entry#names_and_taxonomy" } ] }, { "name": "2.7.7.49", "type": "synonym", "evidence": [ { "id": "A0A5G2R350", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R350/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R350", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R350" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R350", "locus": {} } ], "crossref": [ { "id": "A0A5G2R350", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R350", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000049220", "url": 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"MDNFLESYSLPKLNQAETDQLNRPITRNEIEEVIKSLPTNKSPGPDGFTGEFYQTYKEELVPILLKLFQKVEEEGILPKTFYEATITLIPKPGRDTTKKENYRPISLMNIDAKLLNKILANRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINIIHHINKKKVKNHMIISIDAEKAFDKVQHPFMIKTLAKVGIEGTFLNIIKAIYDKPTANIILNGEKLKAFSLKSGTRQGCPLSPLLFNIVLEVLATAIRQTKEIKGIHIGREEIKLSLYADDMILYLENPKDSTPKLLELINKFSKVAGYKINIQKSVAFLYTSNEALEKEYKNTIPFKIVPHKIKYLGIHLTKEVKDLYAENYKTLIKEIKEDVKKWKDIPCSWIGKINIVKMAILPKAIYRFNAIPIKLPMTFFTELEQTIQTFIWNNKRPRIAKAILRNKNQAGGITLPDFKKYYKATVIKTVWYWYQNRQTDQWNRIENLEINPDTYGQLIFDKGGKNIKWEKETLFSKHCWETWTAACKAMKLEHTLTPCTKINSKWLKDLNIRQDTIKLLEENIGKTLSDINIMNIFSGQSPKAIEIRAKINPWDLIKLKSFCTAKETQKKTKRQLTEWEKIVSNDATDKGLISRIYKQLIQLNSKKTNQSMEKWAKDLNRHFSKEDIQMANKHMKKCSTSLIIREMQIKTTMRYHLTPVRMAIIHKSTNNKCWRGCGEKGTLLHCWWECKLVQPLWRTVWRYLRNLYIELPYDPAIPLLGIYPDKALLKRDTCTRMFIAALFTIARTWKQSKCPSTEDWIRKMWYIYTMEYYSAIKKDDIMPFAATWMELENLILSEMSQKDKDKYHMTSLITGI", "length": 845, "header": "tr|A0A5G2R350-1|A0A5G2R350_PIG Isoform 1 of RNA-directed DNA polymerase OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=A0A5G2R350-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R350-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R350/entry#A0A5G2R350-1", "sequence": { "sequence": 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"MSDRLGHITKGKDGKSKYWTLSLFDKHKGKPVDAVRSSVTPRHGLQSLGKVATARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANRQDQQDPKSSSATASQPPESLPQPGLQKSVSSLQKPTQSTSQENTNSVPGGPKSWAQLNGKPAGHEGGLRGSSRLLSFSPEEFPTLKAAGGQDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRNIISATSLSASPTELGSRNSSAGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMGNAYHPPTYHDMLPAFMCSPQSSENQGPVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGVTRPTRPLRQLVERAPRPTIINAENLKGLDDLDTDADDGWAGLHEEVDYSEKLKFSDDEEEEDVVKDGRPKWSSWDPRRQRQLSLSSADSADAKRAQEEGKDWAEAASTTRVIRKVPEPQPPPRKLHGWTSAPDYQKSSMGTVFRQQSVEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAQKASEAQKQAEKEAPCSPGSEKAPPQENGPAVRKGSPEFSAQEASTTFTEEAPTAPPAVAQSGGSEEGAREAGSPAQEFSKYQKSLPPRFQRQQQQQQQQQQQQQQQEQLYKMQHWQPVYPPPSHPQRSFYPHHPQMLGFDPRWMMMPSYLDPRIPPARTPVDLYPSALHPSGLMKPMMPQDSLSGTGCRSEDQSCVPPLQERKVTAVDPAPVWSPEGYMTLQSKGYSLPHPKSSDTLAMDMHVRSPDEALPGGLGCSGGNGHYPLERAAHATSDISEATCEKAEKEAKLAAQRAGEPGETMAQFDLNYGSAIIENCGSSPGEESEAGSVVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLDQGDGTMPGNGLGTEIWESSSQALPVQASTSDSWTKAAPAFSSTEPGTAEQGFKSSQGDSGVDLSAESRESSATSSQRSSPYGTLKPEEVSGPCLEPKADSHKEQAQKQSEPKESEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIHVDAVLPVPPIEFGVNPKDSDFSLQPGSASGPTGNPVVKLQDALASNAGLAQSIPILRRDHHIQRAIGLSQMSFPTADLTLKMESARKAWENSPSLPEQSSPGGAGSGLQPPSSGGASSGVSYSSFGGVSMPPLPVASVAPSASLPGNHLPPLYLDGHVFASQPRLVPQTIPQQQSYQQAAAAAAQQIPISLHTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSGGTALKPPYSAFPGMQPLEMVKPQSGSPYQPMSGNQALVYESQLGQAAGLGASQMLDSQLPQLTMPLPGSQLPLPRYGSGQQPLLLPQSIQLPQGQSLSAGAPRRLLPPGSQPSVLNTSRESSQMEMKGFHFADSKQNVPSGGSVPSPQTYRPSSASPSGKPSGSAVNMGSVQGHYVQQAKHRVDEKPSLGAVKLQEAPSAASQIKRTGAIKPRAVKVEESKA", "length": 1549, "header": "tr|A0A5G2R3C7-1|A0A5G2R3C7_PIG Isoform 1 of Proline rich coiled-coil 2B OS=Sus scrofa OX=9823 GN=PRRC2B PE=1 SV=2 CANONICAL=A0A5G2R3C7-1" }, "isoforms": [ { "isoform_ac": "A0A287AS06-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3C7/entry#A0A287AS06-1", "sequence": { "sequence": "MSDRLGHITKGKDGKSKYWTLSLFDKHKGKPVDAVRSSVTPRHGLQSLGKVATARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANRQDQQDPKSSSATASQPPESLPQPGLQKSVSSLQKPTQSTSQENTNSVPGGPKSWAQLNGKPAGHEGGLRGSSRLLSFSPEEFPTLKAAGGQDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRNIISATSLSASPTELGSRNSSAGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMGNAYHPPTYHDMLPAFMCSPQSSENQGPVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGVTRPTRPLRQLVERAPRPTIINAENLKGLDDLDTDADDGWAGLHEEVDYSEKLKFSDDEEEEDVVKDGRPKWSSWDPRRQRQLSLSSADSADAKRAQEEGKDWAEAASTTRVIRKVPEPQPPPRKLHGWTSAPDYQKSSMGTVFRQQSVEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAQKASEAQKQAEKEAPCSPGSEKAPPQENGPAVRKGSPEFSAQEASTTFTEEAPTAPPAVAQSGGSEEGAREAGSPAQEFSKYQKSLPPRFQRQQQQQQQQQQQQQQQEQLYKMQHWQPVYPPPSHPQRSFYPHHPQMLGFDPRWMMMPSYLDPRIPPARTPVDLYPSALHPSGLMKPMMPQDSLSGTGCRSEDQSCVPPLQERKVTAVDPAPVWSPEGYMTLQSKGYSLPHPKSSDTLAMDMHVRNESSYSASPGRSGGVSAQRDLLEERGEEFLSAFDKKAPADFDNCVSSQRIGQELLFPPQENVQDAGAPGSHPPDLRCSPLEPDFVPAEKKPEYSSWDMSHQPKAADTATSVEKEAPREEPSFSVSSWEKEGSPSQPPALEPEWPREARGASSQHQEQPGRTRRSGPIKKPVLKALKVEDKEKELEKTKQEPAEAGARLAQESGPGRSAAEDEDLEKDPALASLAPAASEDPGSGRASSGREASKPEEDEKPARAWETRPSREASHTPPTKRNNWIFIDEEQAFGGRGQARSRGRGFREFTFRGRPAGGGSLCGGGVLGARGLYGSSQRSSRGRGLREFGQPEDFPRAKPRRRIASETHSEGSEYEELPKRRRQRGAEAGDEGPRLEREEAAVRKGDFRESWRSSRMYPEDHGGLDAKNRGPRAFGRALPPRLSHCAYGRRTFVAKESAHWQSRSPGASWQEYSAPDTCGARRPLDRDYIPDAYRHSEPLGARGFEDGHVEDKRPFFQDDHAADSENAENRPFRRRRPPRQDKPPRFRRLRQERESLGLWGPEEEPPLLAGQWPGRPKLCPGDKSGATGRRSPELSYQNSSDHANEEWETASESSDFSERRERRGGHGPEPDPQADGSLPGASVGEKKELAKRSFSSQRPLVDRQSRKLEPGGFGEKSVRPGGGEASPRYESQQNGTPLKAKRSPDEALPGGLGCSGGNGHYPLERAAHATSDISEATCEKAEKEAKLAAQRAGEPGETMAQFDLNYGSAIIENCGSSPGEESEAGSVVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLDQGDGTMPGNGLGTEIWESSSQGKSLDLQSSGQQGFKSSQGDSGVDLSAESRESSATSSQRSSPYGTLKPEEVSGPCLEPKADSHKEQAQKQSEPKESEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIHVDAVLPVPPIEFGVNPKDSDFSLQPGSASGPTGNPVVKLQDALASNAGLAQSIPILRRDHHIQRAIGLSQMSFPTADLTLKMESARKAWENSPSLPEQSSPGGAGSGLQPPSSGGASSGVSYSSFGGVSMPPLPVASVAPSASLPGNHLPPLYLDGHVFASQPRLVPQTIPQQQSYQQAAAAAAQQIPISLHTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSGGTALKPPYSAFPGMQPLEMVKPQSGSPYQPMSGNQALVYESQLGQAAGLGASQMLDSQLPQLTMPLPGSQLPLPRYGSGQQPLLLPQSIQLPQGQSLSAGAPRRLLPPGSQPSVLNTSRESSQMEMKGFHFADSKQNVPSGGSVPSPQTYRPSSASPSGKPSGSAVNMGSVQGHYVQQAKHRVDEKPSLGAVKLQEAPSAASQIKRTGAIKPRAVKVEESKA", "length": 2224, "header": "tr|A0A287AS06-1|A0A287AS06_PIG Computationally mapped isoform of Proline rich coiled-coil 2B OS=Sus scrofa OX=9823 GN=PRRC2B PE=1 SV=2 CANONICAL=A0A5G2R3C7-1" }, "locus": { "chromosome": "1", "start_pos": 271426894, "end_pos": 271368955, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055094.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055094.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046847.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046847.2" } ] } }, { "isoform_ac": "A0A287B509-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3C7/entry#A0A287B509-1", "sequence": { "sequence": "MSDRLGHITKGKDGKSKYWTLSLFDKHKGKPVDAVRSSVTPRHGLQSLGKVATARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANRQDQQDPKSSSATASQPPESLPQPGLQKSVSSLQKPTQSTSQENTNSVPGGPKSWAQLNGKPAGHEGGLRGSSRLLSFSPEEFPTLKAAGGQDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRNIISATSLSASPTELGSRNSSAGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMGNAYHPPTYHDMLPAFMCSPQSSENQGPVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGVTRPTRPLRQLVERAPRPTIINAENLKGLDDLDTDADDGWAGLHEEVDYSEKLKFSDDEEEEDVVKDGRPKWSSWDPRRQRQLSLSSADSADAKRAQEEGKDWAEAASTTRVIRKVPEPQPPPRKLHGWTSAPDYQKSSMGTVFRQQSVEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAQKASEAQKQAEKEAPCSPGSEKAPPQENGPAVRKGSPEFSAQEASTTFTEEAPTAPPAVAQSGGSEEGAREAGSPAQEFSKYQKSLPPRFQRQQQQQQQQQQQQQQQEQLYKMQHWQPVYPPPSHPQRSFYPHHPQMLGFDPRWMMMPSYLDPRIPPARTPVDLYPSALHPSGLMKPMMPQDSLSGTGCRSEDQSCVPPLQERKVTAVDPAPVWSPEGYMTLQSKGYSLPHPKSSDTLAMDMHVRNESSYSASPGRSGGVSAQRDLLEERGEEFLSAFDKKAPADFDNCVSSQRIGQELLFPPQENVQDAGAPGSHPPDLRCSPLEPDFVPAEKKPEYSSWDMSHQPKAADTATSVEKEAPREEPSFSVSSWEKEGSPSQPPALEPEWPREARGASSQHQEQPGRTRRSGPIKKPVLKALKVEDKEKELEKTKQEPAEAGARLAQESGPGRSAAEDEDLEKDPALASLAPAASEDPGSGRASSGREASKPEEDEKPARAWETRPSREASHTPPTKRNNWIFIDEEQAFGGRGQARSRGRGFREFTFRGRPAGGGSLCGGGVLGARGLYGSSQRSSRGRGLREFGQPEDFPRAKPRRRIASETHSEGSEYEELPKRRRQRGAEAGDEGPRLEREEAAVRKGDFRESWRSSRMYPEDHGGLDAKNRGPRAFGRALPPRLSHCAYGRRTFVAKESAHWQSRSPGASWQEYSAPDTCGARRPLDRDYIPDAYRHSEPLGARGFEDGHVEDKRPFFQDDHAADSENAENRPFRRRRPPRQDKPPRFRRLRQERESLGLWGPEEEPPLLAGQWPGRPKLCPGDKSGATGRRSPELSYQNSSDHANEEWETASESSDFSERRERRGGHGPEPDPQADGSLPGASVGEKKELAKRSFSSQRPLVDRQSRKLEPGGFGEKSVRPGGGEASPRYESQQNGTPLKAKRSPDEALPGGLGCSGGNGHYPLERAAHATSDISEATCEKAEKEAKLAAQRAGEPGETMAQFDLNYGSAIIENCGSSPGEESEAGSVVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLDQGDGTMPGNGLGTEIWESSSQALPVQASTSDSWTKAAPAFSSTEPGTAEQGFKSSQGDSGVDLSAESRESSATSSQRSSPYGTLKPEEVSGPCLEPKADSHKEQAQKQSEPKESEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIHVDAVLPVPPIEFGVNPKAGLAQSIPILRRDHHIQRAIGLSQMSFPTADLTLKMESARKAWENSPSLPEQSSPGGAGSGLQPPSSGGASSGVSYSSFGGVSMPPLPVASVAPSASLPGNHLPPLYLDGHVFASQPRLVPQTIPQQQSYQQAAAAAAQQIPISLHTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSGGTALKPPYSAFPGMQPLEMVKPQSGSPYQPMSGNQALVYESQLGQAAGLGASQMLDSQLPQLTMPLPGSQLPLPRYGSGQQPLLLPQSIQLPQGQSLSAGAPRRLLPPGSQPSVLNTSRESSQMEMKGFHFADSKQNVPSGGSVPSPQTYRPSSASPSGKPSGSAVNMGSVQGHYVQQAKHRVDEKPSLGAVKLQEAPSAASQIKRTGAIKPRAVKVEESKA", "length": 2212, "header": "tr|A0A287B509-1|A0A287B509_PIG Computationally mapped isoform of Proline rich coiled-coil 2B OS=Sus scrofa OX=9823 GN=PRRC2B PE=1 SV=1 CANONICAL=A0A5G2R3C7-1" }, "locus": { "chromosome": "1", "start_pos": 271426894, "end_pos": 271368955, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055254.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055254.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051197.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051197.1" } ] } }, { "isoform_ac": "A0A5G2R3C7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3C7/entry#A0A5G2R3C7-1", "sequence": { "sequence": "MSDRLGHITKGKDGKSKYWTLSLFDKHKGKPVDAVRSSVTPRHGLQSLGKVATARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANRQDQQDPKSSSATASQPPESLPQPGLQKSVSSLQKPTQSTSQENTNSVPGGPKSWAQLNGKPAGHEGGLRGSSRLLSFSPEEFPTLKAAGGQDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRNIISATSLSASPTELGSRNSSAGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMGNAYHPPTYHDMLPAFMCSPQSSENQGPVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGVTRPTRPLRQLVERAPRPTIINAENLKGLDDLDTDADDGWAGLHEEVDYSEKLKFSDDEEEEDVVKDGRPKWSSWDPRRQRQLSLSSADSADAKRAQEEGKDWAEAASTTRVIRKVPEPQPPPRKLHGWTSAPDYQKSSMGTVFRQQSVEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAQKASEAQKQAEKEAPCSPGSEKAPPQENGPAVRKGSPEFSAQEASTTFTEEAPTAPPAVAQSGGSEEGAREAGSPAQEFSKYQKSLPPRFQRQQQQQQQQQQQQQQQEQLYKMQHWQPVYPPPSHPQRSFYPHHPQMLGFDPRWMMMPSYLDPRIPPARTPVDLYPSALHPSGLMKPMMPQDSLSGTGCRSEDQSCVPPLQERKVTAVDPAPVWSPEGYMTLQSKGYSLPHPKSSDTLAMDMHVRSPDEALPGGLGCSGGNGHYPLERAAHATSDISEATCEKAEKEAKLAAQRAGEPGETMAQFDLNYGSAIIENCGSSPGEESEAGSVVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLDQGDGTMPGNGLGTEIWESSSQALPVQASTSDSWTKAAPAFSSTEPGTAEQGFKSSQGDSGVDLSAESRESSATSSQRSSPYGTLKPEEVSGPCLEPKADSHKEQAQKQSEPKESEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIHVDAVLPVPPIEFGVNPKDSDFSLQPGSASGPTGNPVVKLQDALASNAGLAQSIPILRRDHHIQRAIGLSQMSFPTADLTLKMESARKAWENSPSLPEQSSPGGAGSGLQPPSSGGASSGVSYSSFGGVSMPPLPVASVAPSASLPGNHLPPLYLDGHVFASQPRLVPQTIPQQQSYQQAAAAAAQQIPISLHTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSGGTALKPPYSAFPGMQPLEMVKPQSGSPYQPMSGNQALVYESQLGQAAGLGASQMLDSQLPQLTMPLPGSQLPLPRYGSGQQPLLLPQSIQLPQGQSLSAGAPRRLLPPGSQPSVLNTSRESSQMEMKGFHFADSKQNVPSGGSVPSPQTYRPSSASPSGKPSGSAVNMGSVQGHYVQQAKHRVDEKPSLGAVKLQEAPSAASQIKRTGAIKPRAVKVEESKA", "length": 1549, "header": "tr|A0A5G2R3C7-1|A0A5G2R3C7_PIG Isoform 1 of Proline rich coiled-coil 2B OS=Sus scrofa OX=9823 GN=PRRC2B PE=1 SV=2 CANONICAL=A0A5G2R3C7-1" }, "locus": { "chromosome": "1", "start_pos": 271426894, "end_pos": 271368955, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081880.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081880.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071698.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071698.2" } ] } }, { "isoform_ac": "F1S0W4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3C7/entry#F1S0W4-1", "sequence": { "sequence": "MSDRLGHITKGKDGKSKYWTLSLFDKHKGKPVDAVRSSVTPRHGLQSLGKVATARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANRQDQQDPKSSSATASQPPESLPQPGLQKSVSSLQKPTQSTSQENTNSVPGGPKSWAQLNGKPAGHEGGLRGSSRLLSFSPEEFPTLKAAGGQDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRNIISATSLSASPTELGSRNSSAGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMGNAYHPPTYHDMLPAFMCSPQSSENQGPVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGVTRPTRPLRQLVERAPRPTIINAENLKGLDDLDTDADDGWAGLHEEVDYSEKLKFSDDEEEEDVVKDGRPKWSSWDPRRQRQLSLSSADSADAKRAQEEGKDWAEAASTTRVIRKVPEPQPPPRKLHGWTSAPDYQKSSMGTVFRQQSVEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQAQKASEAQKQAEKEAPCSPGSEKAPPQENGPAVRKGSPEFSAQEASTTFTEEAPTAPPAVAQSGGSEEGAREAGSPAQEFSKYQKSLPPRFQRQQQQQQQQQQQQQQQEQLYKMQHWQPVYPPPSHPQRSFYPHHPQMLGFDPRWMMMPSYLDPRIPPARTPVDLYPSALHPSGLMKPMMPQDSLSGTGCRSEDQSCVPPLQERKVTAVDPAPVWSPEGYMTLQSKGYSLPHPKSSDTLAMDMHVRNESSYSASPGRSGGVSAQRDLLEERGEEFLSAFDKKAPADFDNCVSSQRIGQELLFPPQENVQDAGAPGSHPPDLRCSPLEPDFVPAEKKPEYSSWDMSHQPKAADTATSVEKEAPREEPSFSVSSWEKEGSPSQPPALEPEWPREARGASSQHQEQPGRTRRSGPIKKPVLKALKVEDKEKELEKTKQEPAEAGARLAQESGPGRSAAEDEDLEKDPALASLAPAASEDPGSGRASSGREASKPEEDEKPARAWETRPSREASHTPPTKRNNWIFIDEEQAFGGRGQARSRGRGFREFTFRGRPAGGGSLCGGGVLGARGLYGSSQRSSRGRGLREFGQPEDFPRAKPRRRIASETHSEGSEYEELPKRRRQRGAEAGDEGPRLEREEAAVRKGDFRESWRSSRMYPEDHGGLDAKNRGPRAFGRALPPRLSHCAYGRRTFVAKESAHWQSRSPGASWQEYSAPDTCGARRPLDRDYIPDAYRHSEPLGARGFEDGHVEDKRPFFQDDHAADSENAENRPFRRRRPPRQDKPPRFRRLRQERESLGLWGPEEEPPLLAGQWPGRPKLCPGDKSGATGRRSPELSYQNSSDHANEEWETASESSDFSERRERRGGHGPEPDPQADGSLPGASVGEKKELAKRSFSSQRPLVDRQSRKLEPGGFGEKSVRPGGGEASPRYESQQNGTPLKAKRSPDEALPGGLGCSGGNGHYPLERAAHATSDISEATCEKAEKEAKLAAQRAGEPGETMAQFDLNYGSAIIENCGSSPGEESEAGSVVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLDQGDGTMPGNGLGTEIWESSSQALPVQASTSDSWTKAAPAFSSTEPGTAEQGFKSSQGDSGVDLSAESRESSATSSQRSSPYGTLKPEEVSGPCLEPKADSHKEQAQKQSEPKESEQGSGQSKEHRPGPIGNERSLKNRKGSEGAERLQGAVVPPVNGVEIHVDAVLPVPPIEFGVNPKDSDFSLQPGSASGPTGNPVVKLQDALASNAGLAQSIPILRRDHHIQRAIGLSQMSFPTADLTLKMESARKAWENSPSLPEQSSPGGAGSGLQPPSSGGASSGVSYSSFGGVSMPPLPVASVAPSASLPGNHLPPLYLDGHVFASQPRLVPQTIPQQQSYQQAAAAAAQQIPISLHTSLQAQAQLGLRGGLPVSQSQEIFSSLQPFRSQVYMHPSLSPPSTMILSGGTALKPPYSAFPGMQPLEMVKPQSGSPYQPMSGNQALVYESQLGQAAGLGASQMLDSQLPQLTMPLPGSQLPLPRYGSGQQPLLLPQSIQLPQGQSLSAGAPRRLLPPGSQPSVLNTSRESSQMEMKGFHFADSKQNVPSGGSVPSPQTYRPSSASPSGKPSGSAVNMGSVQGHYVQQAKHRVDEKPSLGAVKLQEAPSAASQIKRTGAIKPRAVKVEESKA", "length": 2241, "header": "tr|F1S0W4-1|F1S0W4_PIG Computationally mapped isoform of Proline rich coiled-coil 2B OS=Sus scrofa OX=9823 GN=PRRC2B PE=1 SV=4 CANONICAL=A0A5G2R3C7-1" }, "locus": { "chromosome": "1", "start_pos": 271426894, "end_pos": 271368955, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006285.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006285.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006123.4", "url": "https://www.ensembl.org/id/ENSSSCP00000006123.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 40, "start_aa": "Thr", "end_pos": 40, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr40", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 593, "start_aa": "Thr", "end_pos": 593, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr593", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., 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"MSCGVGCRRGSDPVLLWLWHRPVATAPIQPLVWEVPYATGVAQEKAKNKTKQNKTKDIGNKLEAKMDNLEETLTKEIQDIKLKQEEMQNTINEIKNSLDAANSRIQEAEERISKVEDRLVEIMDAEQKREKRLKRNEESLRELWDKVKRTNIRIIGVPEGEEKEKGTEKIFQEIIAKNFPHMGKESLTQIQEAQRVPYKINPRRNAQRHKLIKLTKIKDKEKILKAAREKKTSKLQGNPDKAIGRFFNRNSAGQKVVA", "length": 258, "header": "tr|A0A5G2R3D1-1|A0A5G2R3D1_PIG Isoform 1 of L1 transposable element RRM domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=A0A5G2R3D1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R3D1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D1/entry#A0A5G2R3D1-1", "sequence": { "sequence": "MSCGVGCRRGSDPVLLWLWHRPVATAPIQPLVWEVPYATGVAQEKAKNKTKQNKTKDIGNKLEAKMDNLEETLTKEIQDIKLKQEEMQNTINEIKNSLDAANSRIQEAEERISKVEDRLVEIMDAEQKREKRLKRNEESLRELWDKVKRTNIRIIGVPEGEEKEKGTEKIFQEIIAKNFPHMGKESLTQIQEAQRVPYKINPRRNAQRHKLIKLTKIKDKEKILKAAREKKTSKLQGNPDKAIGRFFNRNSAGQKVVA", "length": 258, "header": "tr|A0A5G2R3D1-1|A0A5G2R3D1_PIG Isoform 1 of L1 transposable element RRM domain-containing protein OS=Sus scrofa 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D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3D1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "retrotransposition", "id": "GO:0032197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032197", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3D1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "single-stranded RNA binding", "id": "GO:0003727", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003727", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3D1", "url": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R3D2-1", "uniprot_ac": "A0A5G2R3D2", "uniprot_id": "A0A5G2R3D2_PIG", "mass": { "chemical_mass": 67242.0, "monoisotopic_mass": 67242.0 }, "refseq": {}, "gene_names": [ { "name": "ACIN1", "type": "recommended", "evidence": [ { "id": "A0A5G2R3D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2" } ] } ], "protein_names": [ { "name": "Apoptotic chromatin condensation inducer 1", "type": "synonym", "evidence": [ { "id": "A0A5G2R3D2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3D2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ACIN1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2", "locus": {} } ], "crossref": [ { "id": "A0A5G2R3D2", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R3D2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000002034", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002034", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12432", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12432", "database": "CDD", "categories": [ "Protein 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46589:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16294", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16294", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R3D2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3D2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9D1", "url": "https://www.uniprot.org/uniprotkb/F1S9D1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9D1-1", "url": "https://www.uniprot.org/uniprotkb/F1S9D1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLSESKEGEEKEEVTMDTSENRPENEVPEPPMPIADQVSNDDRPEGSAEDEEKKESSQPKSFKRKISVVSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERTRQLEREKRREHSRERDRERDRDRERDRGDRDRERERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR", "length": 581, "header": "tr|A0A5G2R3D2-1|A0A5G2R3D2_PIG Isoform 1 of Apoptotic chromatin condensation inducer 1 OS=Sus scrofa OX=9823 GN=ACIN1 PE=1 SV=1 CANONICAL=A0A5G2R3D2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R3D2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2/entry#A0A5G2R3D2-1", "sequence": { "sequence": 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"database": "Ensembl Peptide", "id": "ENSSSCP00000065054.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065054.1" } ] } }, { "isoform_ac": "F1S9D1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3D2/entry#F1S9D1-1", "sequence": { "sequence": "MREWEKLGESRIEEKEEVTMDTSENRPENEVPEPPMPIADQVSNDDRPEGSAEDEEKKESSQPKSFKRKISVVSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTLLSPLGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERTRQLEREKRREHSRERDRERDRDRERDRGDRDRERERDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR", "length": 549, "header": "tr|F1S9D1-1|F1S9D1_PIG Computationally mapped isoform of Apoptotic chromatin condensation inducer 1 OS=Sus scrofa OX=9823 GN=ACIN1 PE=1 SV=4 CANONICAL=A0A5G2R3D2-1" }, 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"url": "https://www.uniprot.org/uniprotkb/A0A8W4FCM2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCM2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCM2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RS24", "url": "https://www.uniprot.org/uniprotkb/F1RS24", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RS24-1", "url": "https://www.uniprot.org/uniprotkb/F1RS24-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAGPSTGSSSARFSRRPTCPDASVAGSLPTPPVPRHRKSHSLGNNRGRLYATLGPNWRVPVRNSPRTRSCVYSPTGPCICTLGSSAAVPTMEGPLRRKTLLKEGRKPALSSWTRYWVILSGSTLLYYGAKSLRGTDRKHYKSTPGKKVNVVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNRPQVTPPNLSRAVGDPLLSLDLSQLQIRTSNRAPVSFPLREMPRKHPSETGGRWDGVPRSRLLHLLKSFPPPPQECIPGHIPTHSTPPHSLRSSNNSNNNNS", "length": 604, "header": "tr|A0A5G2R3P2-1|A0A5G2R3P2_PIG Isoform 1 of Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=1 CANONICAL=A0A5G2R3P2-1" }, "isoforms": [ { "isoform_ac": "A0A287ATI3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2/entry#A0A287ATI3-1", "sequence": { "sequence": "MYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAGPSTGSSSARFSRRPTCPDASVAGSLPTPPVPRHRKSHSLGNNRGRLYATLGPNWRVPVRNSPRTRSCVYSPTGPCICTLGSSAAVPTMEGPLRRKTLLKEGRKPALSSWTRYWVILSGSTLLYYGAKSLRGTDRKHYKSTPGKKVNVVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNRPQVPANLMSFE", "length": 514, "header": "tr|A0A287ATI3-1|A0A287ATI3_PIG Computationally mapped isoform of Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=1 CANONICAL=A0A5G2R3P2-1" }, "locus": { "chromosome": "1", "start_pos": 267765918, "end_pos": 267525171, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065829.2", "url": "https://www.ensembl.org/id/ENSSSCT00000065829.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047239.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047239.1" } ] } }, { "isoform_ac": "A0A287BAV9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2/entry#A0A287BAV9-1", "sequence": { "sequence": "MRRRRQPLRPGCRSGSRAPGEEPAKGLLQTGYVTDRGCAEAPCGPETMYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAAV", "length": 351, "header": "tr|A0A287BAV9-1|A0A287BAV9_PIG Computationally mapped isoform of Ral GEF with PH domain and SH3 binding motif 1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=3 CANONICAL=A0A5G2R3P2-1" }, "locus": { "chromosome": "1", "start_pos": 267726497, "end_pos": 267480919, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037627.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037627.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053640.3", "url": "https://www.ensembl.org/id/ENSSSCP00000053640.3" } ] } }, { "isoform_ac": "A0A287BMZ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2/entry#A0A287BMZ5-1", "sequence": { "sequence": "MGQREEGLLQTGYVTDRGCAEAPCGPETMYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAGPSTGSSSARFSRRPTCPDASVAGSLPTPPVPRHRKSHSLGNNRGRLYATLGPNWRVPVRNSPRTRSCVYSPTGPCICTLGSSAAVPTMEGPLRRKTLLKEGRKPALSSWTRYWVILSGSTLLYYGAKSLRGTDRKHYKSTPGKKVNVVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNRPQVPANLMSFE", "length": 542, "header": "tr|A0A287BMZ5-1|A0A287BMZ5_PIG Computationally mapped isoform of Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=1 CANONICAL=A0A5G2R3P2-1" }, "locus": { "chromosome": "1", "start_pos": 267765918, "end_pos": 267482540, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064770.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064770.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057451.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057451.1" } ] } }, { "isoform_ac": "A0A5G2R3P2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2/entry#A0A5G2R3P2-1", "sequence": { "sequence": "MYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAGPSTGSSSARFSRRPTCPDASVAGSLPTPPVPRHRKSHSLGNNRGRLYATLGPNWRVPVRNSPRTRSCVYSPTGPCICTLGSSAAVPTMEGPLRRKTLLKEGRKPALSSWTRYWVILSGSTLLYYGAKSLRGTDRKHYKSTPGKKVNVVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNRPQVTPPNLSRAVGDPLLSLDLSQLQIRTSNRAPVSFPLREMPRKHPSETGGRWDGVPRSRLLHLLKSFPPPPQECIPGHIPTHSTPPHSLRSSNNSNNNNS", "length": 604, "header": "tr|A0A5G2R3P2-1|A0A5G2R3P2_PIG Isoform 1 of Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=1 CANONICAL=A0A5G2R3P2-1" }, "locus": { "chromosome": "1", "start_pos": 267762194, "end_pos": 267525171, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067495.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067495.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070958.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070958.1" } ] } }, { "isoform_ac": "A0A5G2R8B7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2/entry#A0A5G2R8B7-1", "sequence": { "sequence": "MYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAGPSTGSSSARFSRRPTCPDASVAGSLPTPPVPRHRKSHSLGNNRGRLYATLGPNWRVPVRNSPRTRSCVYSPTGPCICTLGSSAAVPTMEGPLRRKTLLKEGRKPALSSWTRYWVILSGSTLLYYGAKSLRGTDRKHYKSTPGKKVNVVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNRPQVTPPKSCLSPKIPSPTPVTKGP", "length": 527, "header": "tr|A0A5G2R8B7-1|A0A5G2R8B7_PIG Computationally mapped isoform of Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=2 CANONICAL=A0A5G2R3P2-1" }, "locus": { "chromosome": "1", "start_pos": 267761843, "end_pos": 267525171, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083020.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083020.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072563.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072563.2" } ] } }, { "isoform_ac": "A0A8W4FCM2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2/entry#A0A8W4FCM2-1", "sequence": { "sequence": "MRRRRQPLRPGCRSGSRAPGEEPAKGLLQTGYVTDRGCAEAPCGPETMYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPERPAGVEDSPLTTVSSGQAHDTLQFRKTLLVGSGT", "length": 152, "header": "tr|A0A8W4FCM2-1|A0A8W4FCM2_PIG Computationally mapped isoform of Ral GEF with PH domain and SH3 binding motif 1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=1 CANONICAL=A0A5G2R3P2-1" }, "locus": { "chromosome": "1", "start_pos": 267553189, "end_pos": 267480919, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097626.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097626.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076603.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076603.1" } ] } }, { "isoform_ac": "F1RS24-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2/entry#F1RS24-1", "sequence": { "sequence": "MYKRDGLMAGVLVTSATPQGSSSDSLEGQSCDYASKSYDAVVFDVLKVTPEEFAELASCGWSKKEKHSLAPNVVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLMSKEDNYKRTREYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQRSNQMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVRYIEELQKFVEDDNYKLSLRIEPGSSSPRLVSSKEDLAGPSTGSSSARFSRRPTCPDASVAGSLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPSEKARHLLDDSVLESRSPRRGLALTSSSAVTNGLSLGSSESSEFSEEMSSGLESRGRLYATLGPNWRVPVRNSPRTRSCVYSPTGPCICTLGSSAAVPTMEGPLRRKTLLKEGRKPALSSWTRYWVILSGSTLLYYGAKSLRGTDRKHYKSTPGKKVNVVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNRPQVPANLMSFE", "length": 567, "header": "tr|F1RS24-1|F1RS24_PIG Computationally mapped isoform of Ras-specific guanine nucleotide-releasing factor RalGPS1 OS=Sus scrofa OX=9823 GN=RALGPS1 PE=4 SV=4 CANONICAL=A0A5G2R3P2-1" }, "locus": { "chromosome": "1", "start_pos": 267765918, "end_pos": 267525171, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006165.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006165.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006006.4", "url": "https://www.ensembl.org/id/ENSSSCP00000006006.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 330, "start_aa": "Thr", "end_pos": 330, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr330", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "regulation of Ral protein signal transduction", "id": "GO:0032485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032485", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" } ], "pmid": "" }, { "name": "small GTPase-mediated signal transduction", "id": "GO:0007264", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007264", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 510, "end_pos": 512, "annotation": "n_glycosylation_sequon" }, { "start_pos": 597, "end_pos": 599, "annotation": "n_glycosylation_sequon" }, { "start_pos": 602, "end_pos": 604, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2R3P2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 604, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2R3P2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2R3P2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2R3P2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 388, "end_pos": 500, "start_aa": "Val", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A5G2R3P2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3P2" }, { "id": "PS50009", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50009" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ras-GEF", "eco_id": "ECO_0000259", "start_pos": 49, "end_pos": 288, "start_aa": "Thr", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 330 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 510, "end_pos": 512 }, { "start_pos": 597, "end_pos": 599 }, { "start_pos": 602, "end_pos": 604 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", 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"length": 1255, "header": "tr|A0A5G2R4U6-1|A0A5G2R4U6_PIG Isoform 1 of Activator of transcription and developmental regulator AUTS2 OS=Sus scrofa OX=9823 GN=AUTS2 PE=4 SV=1 CANONICAL=A0A5G2R4U6-1" }, "isoforms": [ { "isoform_ac": "A0A287AF93-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U6/entry#A0A287AF93-1", "sequence": { "sequence": "MDGPTRGHGLRKKRRSRSQRDRERRSRGGLGAGAAGGGGAGRTRAPSLASSSGSDKEDNGKPPSSAPSRPRPPRRKRRESTSAEEDIIDGFAMTSFVTFEALEKDVALKPQERVEKRQTPLTKKKREALTNGLSFHSKKSRLSHPHHYSSDRENDRNLCQHLGKRKKMPKGLRQLKPGQNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEKLFNTVIVNKDPELGVGALPEHDGHDAGPIVPKISGLERSQEKSQDCGKEPIFEPVVLKDPRPQVPPPPPQPQAEPPPRAPSPDPASGPRAEPPPPPPRPGAQPPAPPEAPPQPAPPPAPRPPRPQSPGPLPPVQAHPSQGLPQPLSAYNSSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPPPPPLTSGSLQVPGHPAGSTYSEQDILRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHALPPTAIMPTPAPPMFDKYPTKVDPFYRHSLFHSYPPAVSAIPPMIPPTGPFGSLQGAFQPKLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSAAGAAHPTGTPFGPPPHHSNFLNPAAHLEPFNRPSTFTGLAAVGGNAFGGLGNPSVTPNSMFGHKDGPSVQNFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSAPAAALDRDRDVDKRDSSVSKDDKERESVEKRHPSHPSPAPVLPVSTLGHSRSSTEQIRGHLNTEAREKDKSKDRERDHSESRKDLGADEHKAKEGPLPEKDGHGHGHEGRSAGEEAKQLARVPSPYARAPVADSARPGSAASREAEARKGEPAYENPKKSAEVKVKEERKEDHDLPPEAPQTHRSSEPPPPPPSSSASVHPGPLASMPMTVGVTGIHPMNSISSLDRTRMMTPFMGISPIPGGERFPYPSFHWDPIRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHHHHHHHHPLSVDPRREHERGAHLEERERLHMLREDYEHPRLHPVHPASLDGHLPHPGLITPGLPSMHYPRISPTAGHQNGLLNKTPPTAALSAPPPLISTLGGRPVSPRRTTPLSAEIRERPPSHTLKDIEAR", "length": 1231, "header": "tr|A0A287AF93-1|A0A287AF93_PIG Computationally mapped isoform of Activator of transcription and developmental regulator AUTS2 OS=Sus scrofa OX=9823 GN=AUTS2 PE=4 SV=2 CANONICAL=A0A5G2R4U6-1" }, "locus": { "chromosome": "3", "start_pos": 14794336, "end_pos": 13565480, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038741.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038741.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042556.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042556.2" } ] } }, { "isoform_ac": "A0A5G2R4U6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U6/entry#A0A5G2R4U6-1", "sequence": { "sequence": "MDGPTRGHGLRKKRRSRSQRDRERRSRGGLGAGAAGGGGAGRTRAPSLASSSGSDKEDNGKPPSSAPSRPRPPRRKRRESTSAEEDIIDGFAMTSFVTFEALEKDVALKPQERVEKRQTPLTKKKREALTNGLSFHSKKSRLSHPHHYSSDRENDRNLCQHLGKRKKMPKGLRQLKPGQNSCRDSDSESASGESKGFHRSSSRERLSDSSAPSSLGTGYFCDSDSDQEEKASDASSEKLFNTVIVNKDPELGVGALPEHDGHDAGPIVPKISGLERSQEKSQDCGKEPIFEPVVLKDPRPQVPPPPPQPQAEPPPRAPSPDPASGPRAEPPPPPPRPGAQPPAPPEAPPQPAPPPAPRPPRPQSPGPLPPVQAHPSQGLPQPLSAYNSSSLSLNSLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTALPPPPPLTSGSLQVPGHPAGSTYSEQDILRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHALPPTAIMPTPAPPMFDKYPTKVDPFYRHSLFHSYPPAVSAIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSAAGAAHPTGTPFGPPPHHSNFLNPAAHLEPFNRPSTFTGLAAVGGNAFGGLGNPSVTPNSMFGHKDGPSVQNFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSAPAAALDRDRDVDKRDSSVSKDDKERESVEKRHPSHPSPAPVLPVSTLGHSRSSTEQIRGHLNTEAREKDKSKDRERDHSESRKDLGADEHKAKEGPLPEKDGHGHGHEGRSAGEEAKQLARVPSPYARAPVADSARPGSAASREAEARKGEPAYENPKKSAEVKVKEERKEDHDLPPEAPQTHRSSEPPPPPPSSSASVHPGPLASMPMTVGVTGIHPMNSISSLDRTRMMTPFMGISPIPGGERFPYPSFHWDPIRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHHHHHHHHPLSVDPRREHERGAHLEERERLHMLREDYEHPRLHPVHPASLDGHLPHPGLITPGLPSMHYPRISPTAGHQNGLLNKTPPTAALSAPPPLISTLGGRPVSPRRTTPLSAEIRERPPSHTLKDIEAR", "length": 1255, "header": "tr|A0A5G2R4U6-1|A0A5G2R4U6_PIG Isoform 1 of Activator of transcription and developmental regulator AUTS2 OS=Sus scrofa OX=9823 GN=AUTS2 PE=4 SV=1 CANONICAL=A0A5G2R4U6-1" }, "locus": { "chromosome": "3", "start_pos": 14794336, "end_pos": 13565480, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071798.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071798.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072106.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072106.1" } ] } }, { "isoform_ac": "F1RJJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U6/entry#F1RJJ8-1", "sequence": { "sequence": "MFAPPTALPPPPPLTSGSLQVPGHPAGSTYSEQDILRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHALPPTAIMPTPAPPMLFHSYPPAVSAIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSAAGAAHPTGTPFGPPPHHSNFLNPAAHLEPFNRPSTFTGLAAVGGNAFGGLGNPSVTPNSMFGHKDGPSVQNFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSAPAAALDRDRDVDKRDSSVSKDDKERESVEKRHPSHPSPAPVLPVSTLGHSRSSTEQIRGHLNTEAREKDKSKDRERDHSESRKDLGADEHKAKEGPLPEKDGHGHGHEGRSAGEEAKQLARVPSPYARAPVADSARPGSAASREAEARKGEPAYENPKKSAEVKVKEERKEDHDLPPEAPQTHRSSEPPPPPPSSSASVHPGPLASMPMTVGVTGIHPMNSISSLDRTRMMTPFMGISPIPGGERFPYPSFHWDPIRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHHHHHHHHPLSVDPRREHERGAHLEERERLHMLREDYEHPRLHPVHPASLDGHLPHPGLITPGLPSMHYPRISPTAGHQNGLLNKTPPTAALSAPPPLISTLGGRPVSPRRTTPLSAEIRERPPSHTLKDIEAR", "length": 790, "header": "tr|F1RJJ8-1|F1RJJ8_PIG Computationally mapped isoform of Activator of transcription and developmental regulator AUTS2 OS=Sus scrofa OX=9823 GN=AUTS2 PE=4 SV=4 CANONICAL=A0A5G2R4U6-1" }, "locus": { "chromosome": "3", "start_pos": 14794336, "end_pos": 14768834, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008472.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008472.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008253.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008253.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1196, "start_aa": "Thr", "end_pos": 1196, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1196", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 550, "start_aa": "Thr", "end_pos": 550, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr550", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 797, "start_aa": "Thr", "end_pos": 797, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr797", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4U6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8939243", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8939243", "resource": "Reactome", "description": "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "chromatin binding", "id": "GO:0003682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003682", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4U6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4U6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4U6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1205, "end_pos": 1207, "annotation": "n_glycosylation_sequon" }, { "start_pos": 387, "end_pos": 389, "annotation": "n_glycosylation_sequon" }, { "start_pos": 429, "end_pos": 431, "annotation": "n_glycosylation_sequon" }, { "start_pos": 777, "end_pos": 779, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2R4U6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1255, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2R4U6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2R4U6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 550, 797, 1196 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1205, "end_pos": 1207 }, { "start_pos": 387, "end_pos": 389 }, { "start_pos": 429, "end_pos": 431 }, { "start_pos": 777, "end_pos": 779 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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48684.0, "monoisotopic_mass": 48684.0 }, "refseq": { "ac": "XP_003123657", "name": "jmjC domain-containing protein 4 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123657" }, "gene_names": [ { "name": "JMJD4", "type": "recommended", "evidence": [ { "id": "F1S5T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S5T5" } ] }, { "name": "JMJD4", "type": "synonym", "evidence": [ { "id": "XP_003123657", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123657" } ] } ], "protein_names": [ { "name": "2-oxoglutarate and iron-dependent oxygenase JMJD4", "type": "recommended", "evidence": [ { "id": "F1S5T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S5T5/entry#names_and_taxonomy" } ] }, { "name": "JmjC domain-containing protein 4", "type": "synonym", "evidence": [ { "id": "F1S5T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S5T5/entry#names_and_taxonomy" } ] }, { "name": "Jumonji domain-containing protein 4", "type": "synonym", "evidence": [ { "id": "F1S5T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S5T5/entry#names_and_taxonomy" } ] }, { "name": "Lysyl-hydroxylase JMJD4", "type": "synonym", "evidence": [ { "id": "F1S5T5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S5T5/entry#names_and_taxonomy" } ] }, { "name": "jmjC domain-containing protein 4 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003123657", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123657" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S5T5", "url": "https://www.uniprot.org/uniprotkb/F1S5T5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "JMJD4", "url": "https://www.uniprot.org/uniprotkb/F1S5T5", "locus": { "chromosome": "2", "start_pos": 50804799, "end_pos": 50812184, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013983", "url": "https://www.ensembl.org/id/ENSSSCG00000013983" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013983", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013983", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512588", "url": "https://www.ncbi.nlm.nih.gov/gene/100512588", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003347", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003347", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041667", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041667", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050910", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050910", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512588", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512588", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HPCMFSR", "url": "https://omabrowser.org/oma/group/HPCMFSR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S5T5", "url": "https://www.orthodb.org/?gene=F1S5T5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12480", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12480", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12480:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12480:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13621", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13621", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9629569", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9629569", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003123657", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123657", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "57156", "url": "https://www.rhea-db.org/rhea/57156", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1S5T5", "url": "https://www.uniprot.org/uniprotkb/F1S5T5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S5T5-1", "url": "https://www.uniprot.org/uniprotkb/F1S5T5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDRQMRAFAESHFRGLQGGLSSNVSPKLDHVDFIENPDSFSYADFFKGYLLPNLPCVFSSAFTEGWGSRRLWVTPSGKPNFDYLLQNYGDVVVPVANCGVREYNSNPKEHMPLKDYISYWKEYIQGNYSSSRGCLYLKDWHLCRDSSAESVFTLPIYFSSDWLNEYWDALDVDDYRFIYMGPTGTWSPFHADIFRSFSWSVNICGRKKWFFFPPGQEEALRDCHGGLPYDVTSPTLLDSRLHPVLNRCSPPLEVTQEAGEMVFVPSGWHHQVHNLEDTISINHNWVNGCNLANMWHFLQQELCAVQQEIIEWRDTMPDWHHHCQVIMRSCSGINFEEFYHFLKVIAERRLLFLAKGVGPGKVECGKSTGLGPQQAAFDVSRIAEVLKSVLAHPDFQRMDTSTFSPQPEELLQQLEEVVAATTSL", "length": 424, "header": "tr|F1S5T5-1|F1S5T5_PIG Isoform 1 of 2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Sus scrofa OX=9823 GN=JMJD4 PE=3 SV=2 CANONICAL=F1S5T5-1" }, "isoforms": [ { "isoform_ac": "F1S5T5-1", "url": "https://www.uniprot.org/uniprotkb/F1S5T5/entry#F1S5T5-1", "sequence": { "sequence": "MDRQMRAFAESHFRGLQGGLSSNVSPKLDHVDFIENPDSFSYADFFKGYLLPNLPCVFSSAFTEGWGSRRLWVTPSGKPNFDYLLQNYGDVVVPVANCGVREYNSNPKEHMPLKDYISYWKEYIQGNYSSSRGCLYLKDWHLCRDSSAESVFTLPIYFSSDWLNEYWDALDVDDYRFIYMGPTGTWSPFHADIFRSFSWSVNICGRKKWFFFPPGQEEALRDCHGGLPYDVTSPTLLDSRLHPVLNRCSPPLEVTQEAGEMVFVPSGWHHQVHNLEDTISINHNWVNGCNLANMWHFLQQELCAVQQEIIEWRDTMPDWHHHCQVIMRSCSGINFEEFYHFLKVIAERRLLFLAKGVGPGKVECGKSTGLGPQQAAFDVSRIAEVLKSVLAHPDFQRMDTSTFSPQPEELLQQLEEVVAATTSL", "length": 424, "header": "tr|F1S5T5-1|F1S5T5_PIG Isoform 1 of 2-oxoglutarate and iron-dependent oxygenase JMJD4 OS=Sus scrofa OX=9823 GN=JMJD4 PE=3 SV=2 CANONICAL=F1S5T5-1" }, "locus": { "chromosome": "2", "start_pos": 50811946, "end_pos": 50806988, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015273.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015273.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014867.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014867.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S5T5", "url": "https://www.uniprot.org/uniprotkb/F1S5T5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512588", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512588", "resource": "KEGG Pathway" }, { "id": "R-SSC-9629569", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9629569", "resource": "Reactome", "description": "Protein hydroxylation" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A029-1", "protein_name": "2-oxoglutarate and iron-dependent oxygenase JMJD4", "gene_name": "Jmjd4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDRETRTFAERYYRGLRDRVPSGGGPRPSSVNFIQAPDAFSYADFVKGFLLPNLPCVFSSAFTEGWGSRRRWVTSEGKPDFEYLLQKYGDAVVPVANCGVREYNSNPKEHMPFRDYISYWKEYIQGGYSSPRGCLYLKDWHLCRDSLVDDLEDIFTLPVYFSSDWLNEFWDVLNVDDYRFVYAGPKGTCPCCRSPFHADIFRSFSWSVNICGKKKWLFFPPGQEEALRDCRGNLPYDVTSTELLDTHLYPRIQQDSLPIEVIQEPGEMVFVPSGWHHQVYNLEDTISINHNWVNGCNLANMWHFLQQELQAVQHEVGEWKDSMPDWHHHCQVIMKSCTGINYEEFYHFLKVIAEKRLLVLRQGLKGDSGDNKSLGLGLQQAAFDVGRLADVLASVVVNPDFQRVDTSVFSPQPEELLQQLEDSVTAAEAL", "length": 430 }, "evidence": [ { "id": "F1S5T5", "url": "https://omabrowser.org/oma/group/F1S5T5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N531-1", "protein_name": "2-oxoglutarate and iron-dependent oxygenase JMJD4", "gene_name": "JMJD4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKRACAQGLALRVSGSGRNSECRLLVPLDCSGTTSGSAVCTSPVSLWPAVGCEPRTPRGFTPEAVLANTSFFFSQFKEQRRRNAQVGFRASALRGSAAGRLHRCFHYPYQPLCPRCSFDIPRAPPRSQQPSRLPVPPRQTPSPGFPAPHGRRTWPGMDRETRVFAESHFRGLEGRLPSRVCPKLDRVDFIEKPDSFSYADFFKGYLLPNLPCVFSSAFTEDWGSRRLWVTPSGKPNFDYLLQNYGDVVVPVANCGVQEYNSNPKEHMPLRDYISYWKEYIQANYSSSRGCLYLKDWHLCRDFLAEGVFTLPIYFSSDWLNEYWDALDVDDYRFVYMGPTGTWSPFHADVFRSFSWSVNICGRKKWFFFPPGQEEALRDCHGGLPYDVTSPTLLDSRLHPMRDRCGPPLEVTQEAGEMVFVPSGWHHQVHNLEDTISINHNWVNGCNLANMWHFLQQELSAVQQEVIEWRDTMPDWHHHCQVIMKSCSGINFEEFYHFLKIIAERRLLLLAKGMSPGQVEGGEDTGLGPQQAAFDIGRIAEVLESVVAHPDFQRVDPSTFSPRPEVLLRQLEEAVAATTSL", "length": 580 }, "evidence": [ { "id": "F1S5T5", "url": "https://omabrowser.org/oma/group/F1S5T5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NX61-1", "protein_name": "2-oxoglutarate and iron-dependent oxygenase JMJD4", "gene_name": "JMJD4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDRATFACSTAFFHDYSSSAQGTFSTGHVDFIDKIESFTYSDFFRDYLIPNQPCVFSEKFTDGWGSRRNWVTWGGKPDFDHLLQEFGEAIVPVANCDVKEYNSNPKEQLPFKEYISYWKEYIKNGYRSSRGCLYLKDWHLSRAFPEQDVYTTPVYFSSDWLNEYWDAIAVDDYRFVYMGPKGSWTPFHADVFRSYSWSANICGRKKWLLYPPGQEDYLKDCHGNLPFDVTAPGLQDRSVYPRYNQSQPPVEIVQEAGEIVFIPSGWHHQVYNLEDTISINHNWVNGCNVAIMWCFLQDELAAVQREINEWKDPMDDWHLQCQLIMKSCTGIDYKEFYNFLKVIAENRISILENGLDDEASAKNTPKAAISTLGMLHAVFDLKRTVKVLTSLSANEDFKKLDLTSLSPPPEALLHHLKAAIDTALL", "length": 425 }, "evidence": [ { "id": "F1S5T5", "url": "https://omabrowser.org/oma/group/F1S5T5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q08BY5-1", "protein_name": "2-oxoglutarate and iron-dependent oxygenase JMJD4", "gene_name": "jmjd4", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDRETFHSCSSLVKLPRQIHQQHCSSHFIEYIEREIPYSKFFKNYLIPNQPCMFSKKFTEEWNCRKKWVTAEGKPNLQRLLHEFDETPVPVANCSVKEYNANPKQIMPFKEFIQYWRESIQNGHSSPKGCLYLKDWHMQRNFPEHNIYKTPIYFSSDWLNEYWDTIEVDDYRFVYMGPKGSWTPFHADVFRSYSWSANICGRKKWLLYPPGQEDFLRDCHGNLAYDVTAPILQDKGLYAQFEEACQPLEIIQEAGEIIFVPSGWHHQVYNLEDTISINHNWLNGCNLDIMWQFLQDELSSVQREIEEWRDTMDTWHQHCQVIMKSCTGIDYAEFASFLKTIANNRISFLNSSPRNADSCQDLLAESLCALGPHHAAFDLQRVLHIFEIMLNNEDFKRLDPATLSFKPEDLLQEIREAIRTIV", "length": 422 }, "evidence": [ { "id": "F1S5T5", "url": "https://omabrowser.org/oma/group/F1S5T5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q67ZB6-1", "protein_name": "Arginine-specific demethylase JMJ20", "gene_name": "JMJ20", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGIQIIGQIERINGKELSYGDFAERYLAKNQPVVISDLTEDWRAREDWVSENGNPNLHVFATHFGKSRVQVADCDTREFTDQKRLEMSVTEFVEQWTNKDSIEESVLYLKDWHFVKEYPDYTAYQTPPLFSDDWLNVYLDNYQMHEDRDSFQKYDQISCSDYRFVYMGGKGSWTPLHADVFRSYSWSANVCGKKRWLFLPPPQSHLVYDRYMKNCVYDIFEEVNETKFPGFKKTTWLECIQEPGEIIFVPSGWHHQVYNLEDTISINHNWLNAYNLSWVWDLLWKDYKDTEESIEDIRDICDDFEAICQRNLAANTGMNLNDFFLFMSRFSLGNMVLLQSYSDKHKNLNSCSLAMAQNLLMNLSTILKVMMKMISAGGVTAEEVYLDLRETLEDPQFLRFVRDMGRTYARIHMEEEDQFLSSKELLQKLSGLAGPNMQICSPKDLVEMINHHNTFSSQIYFI", "length": 462 }, "evidence": [ { "id": "F1S5T5", "url": "https://omabrowser.org/oma/group/F1S5T5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8BFT6-1", "protein_name": "2-oxoglutarate and iron-dependent oxygenase JMJD4", "gene_name": "Jmjd4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDRETRTFAERYYRDLRDPVPSGGGGPTPSGVTFIQTPNAFSYADFVKGFLLPNLPCVFSSAFTEGWGSRRRWVTSEGKPDFEYLQQKYGDAVVPVANCGVREYNSNPKEHMSFRDYISYWKDYIQGSYSSSRGCLYLKDWHLCRDSLVNDLEDIFTLPVYFSSDWLNEFWDVLNVDDYRFVYAGPRGTWSPFHADIFRSFSWSVNICGKKKWLFFPPGEEEALRDCHGNLPYDVTSTELLDTHLYPKIQHHSLPIEVIQEPGEMVFVPSGWHHQVYNLDDTISINHNWVNGCNLPNMWHFLQQELQAVQHEVEEWKDSMPDWHHHCQVIMKSCTGINFEEFYHFLKVIAEKRLLVLEQGLKGDSGDSRSLDLGLQQAAFDIGRLADVLASVVVNPDFQRVDTSAFSPQPEELLQQLEDAVAAAEAL", "length": 427 }, "evidence": [ { "id": "F1S5T5", "url": "https://omabrowser.org/oma/group/F1S5T5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H9V9-3", "protein_name": "2-oxoglutarate and iron-dependent oxygenase JMJD4", "gene_name": "JMJD4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDRETRALADSHFRGLGVDVPGVGQAPGRVAFVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVSEWRDSMPDWHHHCQVIMRSCSGINFEEFYHFLKVIAEKRLLVLREAAAEDGAGLGFEQAAFDVGRITEVLASLVAHPDFQRVDTSAFSPQPKELLQQLREAVDAAAAP", "length": 417 }, "evidence": [ { "id": "F1S5T5", "url": "https://omabrowser.org/oma/group/F1S5T5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1S5T5", "url": "https://www.uniprot.org/uniprotkb/F1S5T5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": 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activity, acting on a protein", "id": "GO:0140096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140096", "evidence": [ { "database": "UniProtKB", "id": "F1S5T5", "url": "https://www.uniprot.org/uniprotkb/F1S5T5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of translational termination", "id": "GO:0045905", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045905", "evidence": [ { "database": "UniProtKB", "id": "F1S5T5", "url": "https://www.uniprot.org/uniprotkb/F1S5T5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 127, "end_pos": 129, "annotation": "n_glycosylation_sequon" }, { "start_pos": 23, "end_pos": 25, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "57156", "name": "", "equation": "L-lysyl-[protein] + 2-oxoglutarate + O2 = 4-hydroxy-L-lysyl-[protein] + succinate + CO2", "summary": "", "cellular_location": "", 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"MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHAGQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCRCPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDSTLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGEKPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTECGRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSSKLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQARQEKLGFSVPKFKETC", "length": 464, "header": "tr|F1S5U0-1|F1S5U0_PIG Isoform 1 of Zinc finger protein 672 OS=Sus scrofa OX=9823 GN=ZNF672 PE=3 SV=1 CANONICAL=F1S5U0-1" }, "isoforms": [ { "isoform_ac": "F1S5U0-1", "url": "https://www.uniprot.org/uniprotkb/F1S5U0/entry#F1S5U0-1", "sequence": { "sequence": 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"phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S5U0", "url": "https://www.uniprot.org/uniprotkb/F1S5U0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524362", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524362", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3MZJ3-1", "protein_name": "Zinc finger protein 672", "gene_name": "ZNF672", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFAASEVAAGRPYGCSECGKSFRYSSVLLRHERVHSRDSSFRCLECGERCAEASDLRAHRRAHAGQTLYICSECGQSFRHSGRLDLHQSVHRRRIRSCRCRACGGCFPHLPALLLHRRRWHPPERPHRCPLCPRAFRQSALRFHLARAHPWGTPTVPADTLHRCTQCSRAFRSVAGLRSHLRVHAARSPSDSTLRQPGAPDTHQCGVCGKSFGKSSTLTRHLQTHSGEKPFKCPECGKGFLESATLVRHQRTHTGEKPYACSDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLVVHQRIHTGERPFPCTECGRCFSDRSDLTKHRRTHTGEKPYRCELCGKCFTCISNLNVHRRNHAGHKPHKCPECGKAFSVGSKLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHRRARASTAPAAAATQPKAGTALIVAGQAGQEKPGLFLSQLRETC", "length": 465 }, "evidence": [ { "id": "F1S5U0", "url": 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"Protein Classification" ] }, { "id": "PF08313", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08313", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005663648", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663648", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S5Z9", "url": "https://www.uniprot.org/uniprotkb/F1S5Z9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S5Z9-1", "url": "https://www.uniprot.org/uniprotkb/F1S5Z9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVRERAAAAMAALERRVPSLDDFAGQSWSSWVERAELPAADGAELEESNKNMKKLDAMTLIKEDMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYARAPPPPPAPASSQKCHVVNGQGPAYRASGSTKTSSREKGQGSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIRVAPPSAFLSQPGSLAKDSPGKNPMAPPSKEPPGREGIEITPSEGLSHRAEGSPPEKEPGGTRLPPKTHRKMARKECDLNRQCGVVNPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKASSRKGESPKEKSPGRKEPALERPSQEPPSSVQAVAAAAAPGSTFSARAKQTYPYCALPRSRASSESELDAEGPGGGDGDPGLFPFPLPRGGAQASSEESEEEGTSDDLRLPTDCHYASRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSSHMWKKIPPAAEPPSHLVSSPPAAPLSPSSASSCPRLPGPPPRPACPASMPPAKDSLVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFCKLPPSKASKSSKGKDALEVEAPSRKRKLSPGPTTFKRTCILEPTGKGKPPGCRGLSAKTKTALGVGLNGTVGPRVKRAGPLDCRGPPHPPPTPVKASQLDSQGGAGLTAKALPTSCLSEEEVAKKRKNLATYCRPVKAKHCQAGAPADAACSVRRKKPGPALAFEDKCSPLKSKAH", "length": 754, "header": "tr|F1S5Z9-1|F1S5Z9_PIG Isoform 1 of Ataxin 7 like 2 OS=Sus scrofa OX=9823 GN=ATXN7L2 PE=4 SV=3 CANONICAL=F1S5Z9-1" }, "isoforms": [ { "isoform_ac": "F1S5Z9-1", "url": 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"chromosome": "4", "start_pos": 110646017, "end_pos": 110637369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007479.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007479.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007283.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007283.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 670, "start_aa": "Thr", "end_pos": 670, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr670", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S5Z9", "url": "https://www.uniprot.org/uniprotkb/F1S5Z9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AA61-1", "protein_name": "Ataxin 7 like 2", "gene_name": "ATXN7L2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAARGRAAAMAAAERRLPSVDEFAGQSWSAWVERAGPPAEPAGLELEESSKGSKKLDAMTLIKEDMSIFGHCPAHDEFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYSKCHAVNGQPAGKALRDKGARSRAQPLPEKAQKDNNLCLFMPVVNLEKIPSFPKPEGLKAAPKTPPKAPPAPPASSPAEPPGRPSPAPPPPPKEPPGAGGDSVPAPTASPVLKAGEKEPGVCRPPPRAHKKLTRKECDLNRQCGVLNPDTKKVCTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKASSRREAPKEKSPPRKDPPGIEPPAPPALPQPPAAPPGASPCRPRPPHAHCPPPRARLSSDSDPEEGDGGLFPFPLPKEGGSRGSSEDSEEEGAADDAHRPDCHYAARPPRPQAFCTFGSRLVSPGCYVFNRRLDRFCSALGSMLERHLSSHMWRKIPPAADSQLPAAPAPPSPAGPAAPTPPPHARTPPTPTGPRDGRVPAGINYTVGSPHAAAACSQPECGGGGSQSITSPLPANIPSPSFSKLPSTKASKSSRAKEAAGGTEPDSVARKRKQPLGAAASPPYKRTCPGDGPKSKSPACQVSAPPGKTKSPAVAALNGSACAGSRLKRALPPDCRPPLSAAPEPRGSPLRGVGVPPPPPRCISEDEVKKRKNSATYCRPSKPKHAAPPPAPPPAPSPAPPDLGCSVRRKKPGSALGFEEKRSVLKSKAH", "length": 727 }, "evidence": [ { "id": "F1S5Z9", "url": "https://omabrowser.org/oma/group/F1S5Z9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7JBE3-1", "protein_name": "Ataxin-7-like protein 2 isoform X2", "gene_name": "Atxn7l2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAVRERAVAAMAALERRVPSLDDFAGQSWSSWVERADLPAADGAELEESNKNVKKLDAMTLIKEDMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYARAPPPPPAPASSQKCHVVNGQGPACRAPGSTKTSSREKGQGSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGVRVAPPSAFLSQPGGLPKDSPGKVPTAPSPKEPPGRENMELIPGEGSSHRAESSPPEKEPSGARLPPKTHRKMARKEFDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVPGRTKDFDVLVAELKASSRKGESPKEKSPGRKEPALERPSQEPPSAIQGVAAAAAPNNTSARSKQAYPYCVLPRSQASSESEADDEGPCGGDGDPGLFPFPLPRGGAQASSEESEEEGTPDDLHLPPDCHYTTRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSSHMWKKIPPAAEPPSHLVSPSLSDPLSPSSMGSCPRLPGPPPRPACPASIPPMKDSLVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKEGVEMEAPSRKRKLSPGPTTFKRTCILEPAGKGKPSGCRGLSAKTKTTLSMGLNGTVGPRVKRAGPLDCRGSPHSSPIPVKASQLENRGMAGHPAKVLPSNCLSEEEVAKKRKNLATYCRPVKAKHCQAGVPPDGTCSVRRKKPGPALPFEEKCSTLKSKAH", "length": 753 }, "evidence": [ { "id": "F1S5Z9", "url": "https://omabrowser.org/oma/group/F1S5Z9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0ABK0LP53-1", "protein_name": "Ataxin 7-like 2", "gene_name": "Atxn7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"gene_name": "ATXN7L2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVRERAAAAMAALERRVPSLDDFAGQSWSSWVERADLPAADGAELEESSKNTKKLDAMTLIKEDMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYGRAPPPPPAPASSQKCHVVNGQGPACRAPGSTKTSSREKGQGSRSRGHQPPEKTQKDNLCQPGGLTKDSPGKPPMAPPSKEPPGRENIEIIPSEGSSHWAEGSPPEKEPSGTRLPPKTHRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKANSRKGESPKEKSPGRKEQVLERPSQELPSSVQVVAAVAAPSSTFSVRAKQTYPYCALPRSRASSESELDDEGPCGGDGDPGLFPFPMPRGGTQASSEESEEEGTSDDLHPPPDCHYATRPPRPQAFCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPPAAEPPAHLVNSPLSAPLSPSSTGTCPRLPGPTLRPACPASMPPTKDNLVPSYPAGSPSVAAACSQAECMGGSQAITSPLPANTPSPSFSKLPPSKASKSSKGKDGVEVEAPSRKRKLSPGPTTLKRTCILEPTGKGKPSGCRGLSAKTKTALSMGLNGTMGPRVKRAGPLDCRGSPHQLPTPVKASQLENRGAAGHPAKALPTNCLSEEEVAKKRKNLATYCRPVKAKHCQAGAPADVACSVRRKKPGPALAFEEKCSTLKSKAH", "length": 722 }, "evidence": [ { "id": "F1S5Z9", "url": "https://omabrowser.org/oma/group/F1S5Z9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 646, "end_pos": 648, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S5Z9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S5Z9" }, { "id": "PS51505", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51505" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SCA7", "eco_id": "ECO_0000259", "start_pos": 262, "end_pos": 329, "start_aa": "Arg", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 670 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 646, "end_pos": 648 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S625-1", "uniprot_ac": "F1S625", "uniprot_id": "F1S625_PIG", "mass": { "chemical_mass": 42377.0, "monoisotopic_mass": 42377.0 }, "refseq": {}, "gene_names": [ { "name": "CYM", "type": "recommended", "evidence": [ { "id": "F1S625", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S625" } ] } ], "protein_names": [ { "name": "Peptidase A1 domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1S625", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S625/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S625", "url": "https://www.uniprot.org/uniprotkb/F1S625" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CYM", "url": "https://www.uniprot.org/uniprotkb/F1S625", "locus": {} } ], "crossref": [ { "id": "F1S625", "url": "https://alphafold.ebi.ac.uk/entry/F1S625", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006804", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006804", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001461", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001461", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012848", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012848", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021109", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021109", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033121", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033121", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR47966", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47966", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47966:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47966:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00026", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00026", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07966", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07966", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1S625", "url": "https://www.uniprot.org/uniprotkb/F1S625", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S625-1", "url": "https://www.uniprot.org/uniprotkb/F1S625-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "KRVLLGGWAALGDARLVLNSPPLLRVPLRKGKSLRKELKERGLLEDFLQKQPYALSSKYSSFGEVASEPLTNYLDTQYFGKIYIGTPPQEFTVVFDTGSSELWVPSVYCKSDACQNHHRFNPSKSSTFQNLDKPLSIQYGTGSIQGFLGYDTVMVAGIVDAHQTVGLSTQEPSDIFTYSEFDGILGLGYPELASEYTVPVFDNMMHRHLVAQDLFAVYMSRNDEGSMLTLGAIDPSYYTGSLHWVPVTMQLYWQFTVDSVTINGVVVACNGGCQAILDTGTSMLAGPSSDILNIQMAIGATESQYGEFDIDCGSLSSMPTVVFEISGRMYPLPPSAYTNQDQGFCTSGFQGDSKSQHWILGVVFIQEYYSVFDRANNRVGLAKAI", "length": 385, "header": "tr|F1S625-1|F1S625_PIG Isoform 1 of Peptidase A1 domain-containing protein OS=Sus scrofa OX=9823 GN=CYM PE=1 SV=4 CANONICAL=F1S625-1" }, "isoforms": [ { "isoform_ac": "F1S625-1", "url": "https://www.uniprot.org/uniprotkb/F1S625/entry#F1S625-1", "sequence": { "sequence": "KRVLLGGWAALGDARLVLNSPPLLRVPLRKGKSLRKELKERGLLEDFLQKQPYALSSKYSSFGEVASEPLTNYLDTQYFGKIYIGTPPQEFTVVFDTGSSELWVPSVYCKSDACQNHHRFNPSKSSTFQNLDKPLSIQYGTGSIQGFLGYDTVMVAGIVDAHQTVGLSTQEPSDIFTYSEFDGILGLGYPELASEYTVPVFDNMMHRHLVAQDLFAVYMSRNDEGSMLTLGAIDPSYYTGSLHWVPVTMQLYWQFTVDSVTINGVVVACNGGCQAILDTGTSMLAGPSSDILNIQMAIGATESQYGEFDIDCGSLSSMPTVVFEISGRMYPLPPSAYTNQDQGFCTSGFQGDSKSQHWILGVVFIQEYYSVFDRANNRVGLAKAI", "length": 385, "header": "tr|F1S625-1|F1S625_PIG Isoform 1 of Peptidase A1 domain-containing protein OS=Sus scrofa OX=9823 GN=CYM PE=1 SV=4 CANONICAL=F1S625-1" }, "locus": { "chromosome": "4", "start_pos": 109671895, "end_pos": 109663783, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007452.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007452.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007256.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007256.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S625", "url": "https://www.uniprot.org/uniprotkb/F1S625" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1S625", "url": "https://www.uniprot.org/uniprotkb/F1S625" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "aspartic-type endopeptidase activity", "id": "GO:0004190", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004190", "evidence": [ { "database": "UniProtKB", "id": "F1S625", "url": "https://www.uniprot.org/uniprotkb/F1S625" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S625-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 385, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S625-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S625" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S625", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S625" }, { "id": "PS51767", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51767" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase A1", "eco_id": "ECO_0000259", "start_pos": 78, "end_pos": 382, "start_aa": "Tyr", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S642-1", "uniprot_ac": "F1S642", "uniprot_id": "F1S642_PIG", "mass": { "chemical_mass": 125243.0, 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"Protein Classification" ] }, { "id": "IPR047163", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047163", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047166", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047166", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519863", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519863", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZRX0", "url": "https://www.orthodb.org/?gene=A0A286ZRX0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1S642", "url": "https://www.orthodb.org/?gene=F1S642", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24131", "url": 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"length": 1157, "header": "tr|A0A286ZRX0-1|A0A286ZRX0_PIG Computationally mapped isoform of Tumor protein p53 binding protein 2 OS=Sus scrofa OX=9823 GN=TP53BP2 PE=3 SV=1 CANONICAL=F1S642-1" }, "locus": { "chromosome": "10", "start_pos": 19889466, "end_pos": 19824941, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053406.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053406.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034209.1", "url": "https://www.ensembl.org/id/ENSSSCP00000034209.1" } ] } }, { "isoform_ac": "F1S642-1", "url": "https://www.uniprot.org/uniprotkb/F1S642/entry#F1S642-1", "sequence": { "sequence": "MRFGSKMMPMFLTVYLSNNEQHFTEVPVTPETICRDVVDLCKEPGESDCHLAEVWCGSERPVADNERMFDVLQRFGSQRSEVRFFLRHERPPGRDVGGGPRSQDPSLKRNGVKVPGEHRRKENGVHSPRMDLTLAELQEMASRQQQQIEAQQQMLATKEQRLKFLKQQDQRQQQQAAEQEKLKRLKEIAENQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNSLFQQKQRELVLAVSKVEELTRQLEMLKNGRIDGHHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEVAVMDKRVNELRDRLWKKKAALQQKENLPVSSDGHLPPAGASAPSRVAAVGPYIQSSTMPRLPSRPELLVKPALPDGPGAPQASEGPMKVQTLPNMRSGAASQVKGSKIHLLGPDWTPPNADLFSSQSSASAPKSSGNAPDQADDGEVPLREKEKKVRPFSMFDTVDQSAAPPAFGTLRKNQSSEDILRDAQAANKNVAKVPPPVPSKPKQINLPYFGQTNQSPSDIKPDGTAPQLATAVASMGNKPKPAGQQQRVLLAPGGPSIGQADQAHPPGSKQESPPAAAVRPFTPQPSKDTLLPPFRKPQTVAASSIYSMYTQHQAPGKNFQQAVQSALTKSHTRGPHFPSVYGKPVIAAAQNQQPLPENIYSNNQGKPGSPEPETDPVSSVQETHENERIPRPLSPTKLLPFLSNPYRNQSDADLEALRKKLSNAPRPLKKRSSITEPEGPNGPNIQKLLYQRTTLAAMETISVPAYPSKAPSATASPESPGEIQNPYLHVEPEKELVALAAEPGAPEGAGGASTEGSDAPAPPPGLEYVPEGLPDSSPSFQDRVEEPNPEAPPLLEVYLEEYPPYPPPPYPSVEPEGPGEDSGSLRPPEITGQGSLPPGKRTNLRKTGSERIAHGMRVKFNPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIVRREDEDEIEWWWARLNDKEGYVPRNLLGLYPRIKPRQRSLA", "length": 1135, "header": "tr|F1S642-1|F1S642_PIG Isoform 1 of Tumor protein p53 binding protein 2 OS=Sus scrofa OX=9823 GN=TP53BP2 PE=3 SV=5 CANONICAL=F1S642-1" }, "locus": { "chromosome": "10", "start_pos": 19888673, "end_pos": 19824941, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011919.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011919.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011612.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011612.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519863", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519863", "resource": "KEGG Pathway" }, { "id": "R-SSC-6804759", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6804759", "resource": "Reactome", "description": "Regulation of TP53 Activity through Association with Co-factors" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" }, { "name": "cell junction", "id": "GO:0030054", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030054", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" }, { "name": "regulation of apoptotic process", "id": "GO:0042981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042981", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" }, { "name": "intrinsic apoptotic signaling pathway by p53 class mediator", "id": "GO:0072332", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072332", "evidence": [ { "database": "UniProtKB", "id": "F1S642", "url": "https://www.uniprot.org/uniprotkb/F1S642" } ], "pmid": "" }, { "name": "positive regulation of execution phase of apoptosis", "id": 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"MAETQQRTFHSVVFSVSGFPGEFVTEEVAREQVSLEREEAAASAGVGGHEAGLFLILGRPTLPSEVGMIVCAVTNPASLDEMAAQAAVILNCVRPVSNQHFFVLEQGICSCLAECGSSCSRELCVPICGRFLRMFHEHMRRMCILIFFGCSVLKISIKSNFSILLGFIFNNYPLRHVTLTLELFHQGLCIHDGTWKSAAYDFADKSQLKKLRNESHLKPVPVVGPKLKRRWPVSYCRELNSYSIPFLGADVSVVKRTQCYLHENLEQSPVNKVLNALQQDLLVNLEYLFHVIQQSKFSAGNRGVVSTRSSY", "length": 311, "header": "tr|F1S650-1|F1S650_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=F1S650-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RB58-1", "url": "https://www.uniprot.org/uniprotkb/F1S650/entry#A0A5G2RB58-1", "sequence": { "sequence": "MAETQQRTFHSVVFSVSGFPGEFVTEEVAREQVSLEREEAAASAGVGGHEAGLFLILGRPTLPSEVGMIVCAVTNPASLDEMAAQAAVILNCVRPVSNQHFFVLEQGICSCLAECGSSCSREPQVRQPHRSADLEIEVESPRETCWS", "length": 147, "header": "tr|A0A5G2RB58-1|A0A5G2RB58_PIG Computationally mapped isoform of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F1S650-1" }, "locus": { "chromosome": "10", "start_pos": 19156765, "end_pos": 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], "protein_names": [ { "name": "Heme-binding protein 2", "type": "recommended", "evidence": [ { "id": "F1S6A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6A9/entry#names_and_taxonomy" } ] }, { "name": "Protein SOUL", "type": "synonym", "evidence": [ { "id": "F1S6A9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6A9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S6A9", "url": "https://www.uniprot.org/uniprotkb/F1S6A9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HEBP2", "url": "https://www.uniprot.org/uniprotkb/F1S6A9", "locus": {} } ], "crossref": [ { "id": "F1S6A9", "url": "https://alphafold.ebi.ac.uk/entry/F1S6A9", "database": "AlphaFoldDB", "categories": [] }, { 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"categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-159236", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159236", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-72187", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72187", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003357427", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357427", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S6B2", "url": "https://www.uniprot.org/uniprotkb/F1S6B2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6B2-1", "url": "https://www.uniprot.org/uniprotkb/F1S6B2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKASQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPTLQPTPEVHNGLRVASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPVPGPEKENVRTVVRTVTLSNKQGEEPLVRLSLTERLGKRKFSVGGDSDPPLKRSLAQRLGKKVEAPEINTDKTPKKVQVSKSLKERLGVSAGPDSEGATERVTKVGEIRVKTLEEILLERASQKRGELQTKLKTEGPSKVDDSTSGTRTSSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDNDTKKTVVLPPVVASRGQSEEPAGRAKSMQEVHIKTLEEIKMEKALRVQQSSESSTSSQPQPEATPGARRFLRITKKTGIQEEKKLQEENEVASQSGVTRTEAKEASDETTGVGITKIQVKRCETGREKHVQKLPDRSTLQKEKSVLTPLRGDLDSGNTQLAEKPVLATVPGTTRHLTKRLPTKSSQKAEVETSGIGDSMLNVKCAAQALDKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAAEVHPAVIAAVKPLSSSTVLQESPAKKAAVAVVPLLSEDKSVPVPETEKPRDSFVLPPTHSSSDLSPPEASGPSSSQMTTKTRRLSSTSTGKPPLSMEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS", "length": 816, "header": "tr|F1S6B2-1|F1S6B2_PIG Isoform 1 of C3H1-type domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F1S6B2-1" }, "isoforms": [ { "isoform_ac": "F1S6B2-1", "url": "https://www.uniprot.org/uniprotkb/F1S6B2/entry#F1S6B2-1", "sequence": { "sequence": "MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKASQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPTLQPTPEVHNGLRVASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPVPGPEKENVRTVVRTVTLSNKQGEEPLVRLSLTERLGKRKFSVGGDSDPPLKRSLAQRLGKKVEAPEINTDKTPKKVQVSKSLKERLGVSAGPDSEGATERVTKVGEIRVKTLEEILLERASQKRGELQTKLKTEGPSKVDDSTSGTRTSSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDNDTKKTVVLPPVVASRGQSEEPAGRAKSMQEVHIKTLEEIKMEKALRVQQSSESSTSSQPQPEATPGARRFLRITKKTGIQEEKKLQEENEVASQSGVTRTEAKEASDETTGVGITKIQVKRCETGREKHVQKLPDRSTLQKEKSVLTPLRGDLDSGNTQLAEKPVLATVPGTTRHLTKRLPTKSSQKAEVETSGIGDSMLNVKCAAQALDKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAAEVHPAVIAAVKPLSSSTVLQESPAKKAAVAVVPLLSEDKSVPVPETEKPRDSFVLPPTHSSSDLSPPEASGPSSSQMTTKTRRLSSTSTGKPPLSMEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS", "length": 816, "header": "tr|F1S6B2-1|F1S6B2_PIG Isoform 1 of C3H1-type domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F1S6B2-1" }, "locus": { "chromosome": "9", "start_pos": 64553109, "end_pos": 64529289, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027953.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027953.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027296.1", "url": "https://www.ensembl.org/id/ENSSSCP00000027296.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 185, "start_aa": "Thr", "end_pos": 185, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr185", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 502, "start_aa": "Thr", "end_pos": 502, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr502", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S6B2", "url": "https://www.uniprot.org/uniprotkb/F1S6B2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622147", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622147", "resource": "KEGG Pathway" }, { "id": "R-SSC-159236", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159236", "resource": "Reactome", "description": "Transport of Mature mRNA derived from an Intron-Containing Transcript" }, { "id": "R-SSC-72187", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72187", "resource": "Reactome", "description": "mRNA 3'-end processing" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M2BGM4-1", "protein_name": "Zinc finger CCCH domain-containing protein 11A isoform X1", "gene_name": "zc3h11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLQGDDCYFFYYSTCTKGDSCPFRHCEAAMGSETVCNLWQEQRCFRNVCKFRHMEIDKNRKEIACYWENQPAGCQKPHCAFHHEKPRIINGNYLAPDKGQVARKDNEEAPLEEKVNQVPAPSANPTNPQLRGVKRTETQENVPSPTHPPVVINPVDDDDEDDQFSEEGDESLGVSPRKLVSSKHDSLDFGIQTLEEIRLRKALMSNLKKARQSTVQGLAQISRPTVEKENIQSLSRLEVNNVKIDSSGKEVGKRRIADRLGKRILERDVPGEEGPPLKRSLAERLGGVVESSTDVLTKKSHKPVHERLGLTTDMSSGDSEPKSSGDIRIKTLEEIRQEKAAKNLSKSKVVRVVKEVPQKEISPSRKSVKPVAGPQVKTFSEILHEKKRKMQEKKEQEINKADKSPERSEEPSSARAANKTTVTTGEVRVKTLEEIRREKAARMQTQLGETTDNKTPTSSEAELSGPSKRRILRINKTSPAAVTQTKPDASEKKPEPATEANGKIEPSSEVVKVKTFEEIMREKKLRKLQEEQVTSSNQTDVGASASPPAPEPSVQPQTTVRQRITFKAKPSPPVSDAVVIEKSSPERSEDSTPSTNTPKPSTSPVRPVRIAEGIVTPAETKVRPKVNVKPSVVKPAAPSVQKRKAAKVHSAVAEVKPLNTTCQTPSSPVMPNKRLKMASPTSKKVVQSDTQQVPSNIENIQMMPVSCSEPASTTSVETVVVPHSPVIKTPSMQRSRRCSTTSGRPPVVTSSSMDDFEDLLDEFTDDRLEDELELDSGKGEDDLLLELSEMIDS", "length": 794 }, "evidence": [ { "id": "F1S6B2", "url": "https://omabrowser.org/oma/group/F1S6B2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O75152-1", "protein_name": "Zinc finger CCCH domain-containing protein 11A", "gene_name": "ZC3H11A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPNQGEDCYFFFYSTCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPTGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKASQLSVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPTLQPTPEVHNGLRVTSVRKPAVNIKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLHPEPVPGPEKENVRTVVRTVTLSTKQGEEPLVRLSLTERLGKRKFSAGGDSDPPLKRSLAQRLGKKVEAPETNIDKTPKKAQVSKSLKERLGMSADPDNEDATDKVNKVGEIHVKTLEEILLERASQKRGELQTKLKTEGPSKTDDSTSGARSSSTIRIKTFSEVLAEKKHRQQEAERQKSKKDTTCIKLKIDSEIKKTVVLPPIVASRGQSEEPAGKTKSMQEVHIKTLEEIKLEKALRVQQSSESSTSSPSQHEATPGARRLLRITKRTGMKEEKNLQEGNEVDSQSSIRTEAKEASGETTGVDITKIQVKRCETMREKHMQKQQEREKSVLTPLRGDVASCNTQVAEKPVLTAVPGITRHLTKRLPTKSSQKVEVETSGIGDSLLNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEMHAAVIAAVKPLSSSSVLQEPPAKKAAVAVVPLVSEDKSVTVPEAENPRDSLVLPPTQSSSDSSPPEVSGPSSSQMSMKTRRLSSASTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS", "length": 810 }, "evidence": [ { "id": "F1S6B2", "url": "https://omabrowser.org/oma/group/F1S6B2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5ZJJ1-1", "protein_name": "Zinc finger CCCH domain-containing protein 11A", "gene_name": "ZC3H11A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSKQGDDCYFYFYSTCNKGDNCPFRHCEAALGNETICTLWKEGRCFRNVCRFRHMEIDKKRSEIPCFWENQPGGCQKSNCAFHHTKGRYVDGLFLPPSKTTLPSPPESADDDLKAAQITLQQNKLSVQSNPSPQLRGVMKVENSENVPSPTHPPVVINAADDDEDDDDQLSEEGEETKTPVQQPAEENHNGLRIISTRKSNADTKQDDSLNFGIKTLEEIKLKKQKEKTKKQSEGPSGVPAHPLQSRTVPVPEKENVRTVVRTVTLSAKQGEEPVIRLNIAEKPGKRKGSVADVSGLPLKRSLAERLGRKIEVDKAPRREKGAKPAGEIHVKTLEEIRLERANQRGETLTAPQAEVCCKVEDPSSGVRPPPAVRIKTFSEALAERKQRRLEEEKQKLEEFLTEKRAEGERKKQRILPPSVPGKVKLEEPTRKIKPLEEVHIKTLEEIKQEKALRMQQSGENVPAPAAQPGPAPAGRKLLRITKLAAPGKEEKKTVELSRASPKAVSAPAEPSNQSAPNSKAQVKSLEGTVKEKLQLRQPEKLKKEVAAVPSATEETVKAKCKVCVKPSDSKASTPTKRALKRKAAEISPSAVAAVKPLSSTETEEPPAKKAALTAAPALPEDSLLTKPGVEKPPSSLELQLGSQADSVEQSGDSSSASASSQSVAKAQQLSSTGAGKAPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS", "length": 723 }, "evidence": [ { "id": "F1S6B2", "url": "https://omabrowser.org/oma/group/F1S6B2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6NZF1-1", "protein_name": "Zinc finger CCCH domain-containing protein 11A", "gene_name": "Zc3h11a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPNQGEDCYFYFYSTCAKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPVGCQKLNCAFHHTRSRYVDGLFLPPSKTVLPTVPESQEEEVKTSQLTVQQSKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDESKTPALQPSPDVHNGLRVASARKPGVSLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSVLQQPQPNPGPEKENVRTVVRMVTLSSKPEEPLVRLSLSERLGKRKLSVGGDSDPPLKRSLAQRLGKKVESPETNIDKAPKKERGHKAGEIHVKTLEEILLERASQKRGELQTKLKAEEPSGADDSPSGTKSSSSVRIKTFSEVLAEKKHRQQEMERQKSKKDTSCLTLTDDTEMKKTVSLPTVAVSKGQPEEPAGRARSMQEVHIKTLEEIKLEKALRVQQSSESSGNSRPQAEAAPGTKRLLRITKRAGVKEEKKCGLEDSGDPPQSSVTKMEANETSDETISDPTKLAVNRCDTVKEKHTQRLQERGASQKEKAALSSVRGDEASSYTRVAGKPVLTAVSGVTRHLAKRLPVESSQKGEVETSGIGDSILNVKCAAQTLEKRSKVKPKVNVKPSVVKVVSAPKLAPKRKAVEMHSAVIAAVKPLSSSSVLQESPTKKAAVAVVPLLSEDKPVTMSETENPKDSSVLSSAQAASEPLLPEGSGPSSSQTATKPRRLSSASTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS", "length": 792 }, "evidence": [ { "id": "F1S6B2", "url": "https://omabrowser.org/oma/group/F1S6B2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "poly(A)+ mRNA export from nucleus", "id": "GO:0016973", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016973", "evidence": [ { "database": "UniProtKB", "id": "F1S6B2", "url": "https://www.uniprot.org/uniprotkb/F1S6B2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F1S6B2", "url": "https://www.uniprot.org/uniprotkb/F1S6B2" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1S6B2", "url": "https://www.uniprot.org/uniprotkb/F1S6B2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1S6B2", "url": "https://www.uniprot.org/uniprotkb/F1S6B2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 33, "end_pos": 35, "annotation": "n_glycosylation_sequon" }, { "start_pos": 438, "end_pos": 440, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S6B2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6B2" }, { "id": "PS50103", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50103" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C3H1-type", "eco_id": "ECO_0000259", "start_pos": 2, "end_pos": 29, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 185, 502 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 33, "end_pos": 35 }, { "start_pos": 438, "end_pos": 440 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", 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"count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"uniprot_canonical_ac": "F1S6C0-1", "uniprot_ac": "F1S6C0", "uniprot_id": "F1S6C0_PIG", "mass": { "chemical_mass": 15901.0, "monoisotopic_mass": 15901.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "RING-type domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1S6C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6C0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S6C0", "url": "https://www.uniprot.org/uniprotkb/F1S6C0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/F1S6C0", "locus": {} } ], "crossref": [ { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052804", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052804", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46359", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46359", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46359:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46359:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13639", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13639", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1S6C0", "url": "https://www.uniprot.org/uniprotkb/F1S6C0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6C0-1", "url": "https://www.uniprot.org/uniprotkb/F1S6C0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141, "header": "tr|F1S6C0-1|F1S6C0_PIG Isoform 1 of RING-type domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F1S6C0-1" }, "isoforms": [ { "isoform_ac": "F1S6C0-1", "url": "https://www.uniprot.org/uniprotkb/F1S6C0/entry#F1S6C0-1", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141, "header": "tr|F1S6C0-1|F1S6C0_PIG Isoform 1 of RING-type domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F1S6C0-1" }, "locus": { "chromosome": "9", "start_pos": 61559946, "end_pos": 61559524, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026015.2", "url": "https://www.ensembl.org/id/ENSSSCT00000026015.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024800.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024800.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S6C0", "url": "https://www.uniprot.org/uniprotkb/F1S6C0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "F1S6C0", "url": "https://omabrowser.org/oma/group/F1S6C0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1S6C0", "url": "https://www.uniprot.org/uniprotkb/F1S6C0" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F1S6C0", "url": "https://www.uniprot.org/uniprotkb/F1S6C0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "ubiquitin ligase complex", "id": "GO:0000151", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000151", "evidence": [ { "database": "UniProtKB", "id": "F1S6C0", "url": "https://www.uniprot.org/uniprotkb/F1S6C0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "F1S6C0", "url": "https://www.uniprot.org/uniprotkb/F1S6C0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S6C0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6C0" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 86, "end_pos": 127, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S6H4-1", "uniprot_ac": "F1S6H4", "uniprot_id": "F1S6H4_PIG", "mass": { "chemical_mass": 54063.0, "monoisotopic_mass": 54063.0 }, "refseq": { "ac": "NP_001231850", "name": "FAD-dependent oxidoreductase domain-containing protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231850" }, "gene_names": [ { "name": "FOXRED1", "type": "recommended", "evidence": [ { "id": "F1S6H4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ] }, { "name": "FOXRED1", "type": "synonym", "evidence": [ { "id": "NP_001231850", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231850" } ] } ], "protein_names": [ { "name": "FAD-dependent oxidoreductase domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "F1S6H4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6H4/entry#names_and_taxonomy" } ] }, { "name": "FAD-dependent oxidoreductase domain-containing protein 1", "type": "synonym", "evidence": [ { "id": "NP_001231850", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231850" } ] } ], "function": [ { "annotation": "Required for the assembly of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I). Involved in mid-late stages of complex I assembly.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D0RFL9", "url": "https://www.uniprot.org/uniprotkb/A0A8D0RFL9#function" }, { "database": "UniProtKB", "id": "ARBA00046185", "url": "https://www.uniprot.org/uniprotkb/ARBA00046185#function" }, { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FOXRED1", "url": "https://www.uniprot.org/uniprotkb/F1S6H4", "locus": { "chromosome": "9", "start_pos": 53372952, "end_pos": 53365250, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030017", "url": "https://www.ensembl.org/id/ENSSSCG00000030017" } ] } } ], "crossref": [ { "id": "F1S6H4", "url": "https://alphafold.ebi.ac.uk/entry/F1S6H4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030017", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030017", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513997", "url": "https://www.ncbi.nlm.nih.gov/gene/100513997", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006076", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006076", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036188", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036188", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513997", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513997", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PDHNALI", "url": "https://omabrowser.org/oma/group/PDHNALI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8D0RFL9", "url": "https://www.orthodb.org/?gene=A0A8D0RFL9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1S6H4", "url": "https://www.orthodb.org/?gene=F1S6H4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13847", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13847", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13847:SF287", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13847:SF287", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01266", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01266", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6799198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001231850", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231850", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8D0RFL9", "url": "https://www.uniprot.org/uniprotkb/A0A8D0RFL9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0RFL9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0RFL9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S6H4-1", "url": "https://www.uniprot.org/uniprotkb/F1S6H4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRRALWLGLRRGLLGRELGTRRGGSTLDWDGKVSNIKKKIQSILPGGAWKPLYDTSHLPPEQADVVIVGGGVLGLSVAYWLKRLEKRRGAIRVLVVERDHTYSQASTVLSVGGIRQQFSLPENIQLSLFSAEFLRNINEYLAVVDDPPLDLQFNPSGYLFLASEKGAATMENNVKVQRQEGAKVCLMSPEQLRKKFPWINTEGVALASYGLENEGWFDPWCLLQGLRRKVQSMGVLFCQGEVTRFVSSSTHMETISGEEVTLKRIHEVQVKMDCSQEYQPVECAIVVNAAGAWSGQIAELAGVGKGLPGTLQGTKLPVEPRKRYVYLWHCPQGPGLEAPLVADLSGVYFRREGLGNNYLGGCSPAEEEEPDPGNLEVDHDFFQEKVWPPLAWRVPAFETLKVQRAWAGYYDYNTFDQNGVVGPHPLIVNMYFATGFSGHGLQQAPAVGRAVAEMVLEGHFQTINLSPFLFTRFYLGEKALEHCIL", "length": 486, "header": "tr|F1S6H4-1|F1S6H4_PIG Isoform 1 of FAD-dependent oxidoreductase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=FOXRED1 PE=4 SV=3 CANONICAL=F1S6H4-1" }, "isoforms": [ { "isoform_ac": "A0A8D0RFL9-1", "url": "https://www.uniprot.org/uniprotkb/F1S6H4/entry#A0A8D0RFL9-1", "sequence": { "sequence": "MLRRALWLGLRRGLLGRELGTRRGGSTLGKVEGSGGYHGSGMPPMSSHVTFRTWDPWPRSEDSGSLEEGISYLPELVQSGQVYGSRGCPSQYSQASTVLSVGGIRQQFSLPENIQLSLFSAEFLRNINEYLAVVDDPPLDLQFNPSGYLFLASEKGAATMENNVKVQRQEGAKVCLMSPEQLRKKFPWINTEGVALASYGLENEGWFDPWCLLQGLRRKVQSMGVLFCQGEVTRFVSSSTHMETISGEEVTLKRIHEVQVKMDCSQEYQPVECAIVVNAAGAWSGQIAELAGVGKGLPGTLQGTKLPVEPRKRYVYLWHCPQGPGLEAPLVADLSGVYFRREGLGNNYLGGCSPAEEEEPDPGNLEVDHDFFQEKVWPPLAWRVPAFETLKVQRAWAGYYDYNTFDQNGVVGPHPLIVNMYFATGFSGHGLQQAPAVGRAVAEMVLEGHFQTINLSPFLFTRFYLGEKALEHCIL", "length": 475, "header": "tr|A0A8D0RFL9-1|A0A8D0RFL9_PIG Computationally mapped isoform of FAD-dependent oxidoreductase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=FOXRED1 PE=4 SV=1 CANONICAL=F1S6H4-1" }, "locus": { "chromosome": "9", "start_pos": 53372555, "end_pos": 53365317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078532.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078532.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060495.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060495.1" } ] } }, { "isoform_ac": "F1S6H4-1", "url": "https://www.uniprot.org/uniprotkb/F1S6H4/entry#F1S6H4-1", "sequence": { "sequence": "MLRRALWLGLRRGLLGRELGTRRGGSTLDWDGKVSNIKKKIQSILPGGAWKPLYDTSHLPPEQADVVIVGGGVLGLSVAYWLKRLEKRRGAIRVLVVERDHTYSQASTVLSVGGIRQQFSLPENIQLSLFSAEFLRNINEYLAVVDDPPLDLQFNPSGYLFLASEKGAATMENNVKVQRQEGAKVCLMSPEQLRKKFPWINTEGVALASYGLENEGWFDPWCLLQGLRRKVQSMGVLFCQGEVTRFVSSSTHMETISGEEVTLKRIHEVQVKMDCSQEYQPVECAIVVNAAGAWSGQIAELAGVGKGLPGTLQGTKLPVEPRKRYVYLWHCPQGPGLEAPLVADLSGVYFRREGLGNNYLGGCSPAEEEEPDPGNLEVDHDFFQEKVWPPLAWRVPAFETLKVQRAWAGYYDYNTFDQNGVVGPHPLIVNMYFATGFSGHGLQQAPAVGRAVAEMVLEGHFQTINLSPFLFTRFYLGEKALEHCIL", "length": 486, "header": "tr|F1S6H4-1|F1S6H4_PIG Isoform 1 of FAD-dependent oxidoreductase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=FOXRED1 PE=4 SV=3 CANONICAL=F1S6H4-1" }, "locus": { "chromosome": "9", "start_pos": 53372555, "end_pos": 53365317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023210.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023210.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024663.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024663.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513997", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513997", "resource": "KEGG Pathway" }, { "id": "R-SSC-6799198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6799198", "resource": "Reactome", "description": "Complex I biogenesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZUV6-1", "protein_name": "FAD-dependent oxidoreductase domain-containing protein 1", "gene_name": "FOXRED1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLRAVRGGRAVWAPRGGSGSGSGGAKLGRPLRTAAPQRSDIFRELGPRLSRLGQALRGQLPESEGAWNSLRPHQNSPPPPERADVVVVGGGVLGWSVAYWLKTLENRRHGMRVVVVERDPTYSQASTVLSVGGIRQQFSLPENIRLSLQSATFLRTINEHLWVPNEPPIDIQFQPSGYLFLASEHGAATLEAGVKVQREEGAKVALLSPSQLKAKFPWINTENVAVASYGLENEGWFDPWSLLNAFRRKAMSLGVYSCVGEVTSFVADTADNTPGMPRGVGRVKYVNVRLPDSPEQQPVSCAIVVAAAGAWTGKLLDSATAGLQGSLTLRRLPIEPRKRYVYVWHCPGGPGLETPFLIDTSGAYFRREGIAGNYLGSMSPPEGREPDAGNLEVDHDFFQEEVWPRLAHRVPAFRSLKQVKSAWAGYYDYNAFDQNGVLGPHPQLPNVFVLGGFSGHGLQQSPAAGRVAAELLLHGSCAAVDVGRLAPGRLWGSEPLLEAAIV", "length": 502 }, "evidence": [ { "id": "F1S6H4", "url": "https://omabrowser.org/oma/group/F1S6H4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7GU43-1", "protein_name": "FAD-dependent oxidoreductase domain-containing protein 1", "gene_name": "Foxred1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFRRVLRLGLTPGRPNRGLRTRRGGFILDWDAKVSDFKKKIECMLPGKQWGMPYDTSYLPPKQSDVVIIGGGILGLSVAFWLKKMESSRGAIRVLVVEQDHTFFFSQYSRASSTGPSVGGIWQQFSVPENVQLSLFSINFLRNINEYLAVVDAPLVDLQFNPSGCLLLASEKNAATLESNVKMQRQEGAKVCLISPEQLQNKFPWINIEGVALASYGMEDEGWFDAWSLFQGLRRKVQSMGVLLYQGEVTRFITSSRQMETTSGEQVVLRRIHEVQVKMNNSLEYQPVECAVVINAAGAWSGQVAELAGIGKGLPGTLQGTKLPVEPRKRYVHLWHCPQGPGLETPLVADINGVYFRREGLGSNYLGGCSPTEEEEPDPTNLEVDHDFFQNKVWPHLVQRVPSFKTLKVQSNWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQHAPGIGRAVAEMVLEGQFKTIDMSPFLFNRFYLGEKLQEYNIL", "length": 492 }, "evidence": [ { "id": "F1S6H4", "url": "https://omabrowser.org/oma/group/F1S6H4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A1Z6N5-1", "protein_name": "FAD-dependent oxidoreductase domain-containing protein 1", "gene_name": "Dmel\\CG3270", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLGLRRVLRLGALRQLRSLSGKPQGDVLPGSCGVLIIGGGGMGASSAFWLKSRALQLGRKLNVLVVERDAGYTSASTVLSVGGVRQQFSLAENIEMSLFGYNFVVNGREHLGDVDLCYQPNGYLILASEKGAHILAKNSKLQNELGARNELLGPEALRQRFPWLSTEGVELGCHGIDKEGWFDPWALLMGYKKKARALGANFANGSVVGFEWNDSGGLSGAVVDAGDVLQRTVKFDTCVLAAGAYSGQVARLAGIGDKEAKEASLSVALPVEPRKRYVYVVSTQGKNCPGLATPLTVDPDGTYFRRDGLCGNFLCGRSPNEDEEPECETLDVDHGYFETDVWPTLANRVPAFESVKIQSSWAGFYDHNTFDANGVIGRHPHYSNLFIAAGFSGHGIQQTPAVGRAISELILDGKFTTLDLSRLGFERLVNQQPMHEVNIV", "length": 440 }, "evidence": [ { "id": "F1S6H4", "url": "https://omabrowser.org/oma/group/F1S6H4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "D3ZEH2-1", "protein_name": "FAD-dependent oxidoreductase domain-containing protein 1", "gene_name": "Foxred1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFRKVLRLGLCPGLPTRGLRTRTGGFTLDWDTKVSDFKKKIESILPGKQCEMVYDTSHLPPEQSDVVIIGGGILGLSVAFWLKKLESRRGAMQVLVVEQDHTYSRASSTGPSVGGIWQQFSVPENVQLSLFSINFLRNINEYLAVVDAPPVELRFNPSGCLLLASEKDAATLESNVRMQRQEGAKVCLMSPEQMQNKFPWMNAEGVALASYGLENEGWFDAWSLLQGLRRKVQSMGVFFCQGEVTRFITSSNQMETPTGEQVVLRRINNVHVKMDKSLEYQPVECAVVVNAAGAWSGQIAELAGIGKGLPGTLQGTKLPVEPRKRYVHLWHCPQGPGLETPLVADISGVYFRREGLGSNYLGGCSPTEEEEPDPTNLEVDHDFFQNKVWPHLVQRVPSFKTLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGRGLQHAPGIGRAVAEMILEGHFKTIDMSPFLFTRFYLGEKLQEHNIL", "length": 487 }, "evidence": [ { "id": "F1S6H4", "url": "https://omabrowser.org/oma/group/F1S6H4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3TQB2-1", "protein_name": "FAD-dependent oxidoreductase domain-containing protein 1", "gene_name": "Foxred1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFRRALRLGLGPGLPYRGLRTRKGGFTLDWDAKVSDFKKKVDSILPGKKYEVLYDTSHLPPEQADVVIIGGGILGLSVAFWLKKLESRRGAIRVLVVEQDHTYSRASSTGPSVGGIWQQFSVPENVQLSLFSINFLRNINEYLAVVDAPPVELQFNPSGCLLLASEKDAATLENNVKMQRQEGAKVCLMSPEQLQTKFPWINVEGVALASYGLEDEGWFDAWSLLQGLRRKVQSMGVFFCQGEVTRFITSSTPMKTPTGEHVVLRRINNVHVKMDKSLEYQPVECAVVINAAGAWSGKIAELAGVGKGLPGTLQGTKLPVEPRKRYVHLWHCPQGPGLETPLVADISGVYFRREGLGSNYLGGCSPTEEEEPDPTNLNVDHDFFQNKVWPHLVQRVPSFKTLEVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGRGLQHAPGIGRAVAEIMLEGHFKTIDMSPFLFTRFYLGEKLQEYNIL", "length": 487 }, "evidence": [ { "id": "F1S6H4", "url": "https://omabrowser.org/oma/group/F1S6H4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96CU9-1", "protein_name": "FAD-dependent oxidoreductase domain-containing protein 1", "gene_name": "FOXRED1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLPPEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQEGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQGEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKIQENNII", "length": 486 }, "evidence": [ { "id": "F1S6H4", "url": "https://omabrowser.org/oma/group/F1S6H4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "mitochondrial respiratory chain complex I assembly", "id": "GO:0032981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032981", "evidence": [ { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ], "pmid": "" }, { "name": "respiratory electron transport chain", "id": "GO:0022904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022904", "evidence": [ { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "F1S6H4", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 465, "end_pos": 467, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S6H4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 486, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S6H4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S6H4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S6H4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S6H4" }, { "id": "PF01266", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01266" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FAD dependent oxidoreductase", "eco_id": "ECO_0000259", "start_pos": 65, "end_pos": 455, "start_aa": "Asp", "end_aa": "Met", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 465, "end_pos": 467 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S745", "url": "https://www.uniprot.org/uniprotkb/F1S745" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S745-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 391, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S745-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S745" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S745", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S745" }, { "id": "PF00027", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00027" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Cyclic nucleotide-binding", "eco_id": "ECO_0000259", "start_pos": 147, "end_pos": 239, "start_aa": "Phe", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 117 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 77, "end_pos": 79 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": 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"Protein Classification" ] }, { "id": "PF05907", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05907", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FDE9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDE9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDE9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S765", "url": "https://www.uniprot.org/uniprotkb/F1S765", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S765-1", "url": "https://www.uniprot.org/uniprotkb/F1S765-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGKIALQLKATLENVTNLRPVGEDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCSRENSIEILSHTIKAYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSDINLQEKDWTDYDEKAQESVGIYEVTHQFVKC", "length": 160, "header": "tr|F1S765-1|F1S765_PIG Isoform 1 of CXXC motif containing zinc binding protein OS=Sus scrofa OX=9823 GN=CZIB PE=1 SV=2 CANONICAL=F1S765-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FDE9-1", "url": "https://www.uniprot.org/uniprotkb/F1S765/entry#A0A8W4FDE9-1", "sequence": { "sequence": "QKIALQLKATLENVTNLRPVGEDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCSRENSIEILSHTIKAYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSDINLQEKDWTDYDEKAQESVGIYEVTHQFVKC", "length": 159, "header": "tr|A0A8W4FDE9-1|A0A8W4FDE9_PIG Computationally mapped isoform of CXXC motif containing zinc binding protein OS=Sus scrofa OX=9823 GN=CZIB PE=1 SV=1 CANONICAL=F1S765-1" }, "locus": { "chromosome": "6", "start_pos": 159018070, "end_pos": 159002922, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099755.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099755.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077290.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077290.1" } ] } }, { "isoform_ac": "F1S765-1", "url": "https://www.uniprot.org/uniprotkb/F1S765/entry#F1S765-1", "sequence": { "sequence": "MGKIALQLKATLENVTNLRPVGEDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCSRENSIEILSHTIKAYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAAEGVESGTVFSDINLQEKDWTDYDEKAQESVGIYEVTHQFVKC", "length": 160, "header": "tr|F1S765-1|F1S765_PIG Isoform 1 of CXXC motif containing zinc binding protein OS=Sus scrofa OX=9823 GN=CZIB PE=1 SV=2 CANONICAL=F1S765-1" }, "locus": { "chromosome": "6", "start_pos": 159018070, "end_pos": 159002686, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004262.4", "url": "https://www.ensembl.org/id/ENSSSCT00000004262.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004166.2", "url": "https://www.ensembl.org/id/ENSSSCP00000004166.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S765", "url": "https://www.uniprot.org/uniprotkb/F1S765" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516273", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516273", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A1Z9A2-1", "protein_name": "UPF0587 protein CG4646", "gene_name": "", 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"MALCPGASLAPLEDSDMTPSLNSTPPSPQLPGLASGPISGPNPDVDLAPILNPPPSPGLALVPDLNPTLSPVSEETPGLGSDNTPRPDESWDSAPASLQVTAAHSGEDPGLDSNQVSRPPSQGALCAASSLLLSPGSTEAKGLSSGNHSGPNSEVAFNSEGKPFDLGQSNSNPSRPESNPLERPYSKEDLVLGHSISRPGSKALLIPASNASLDPDSNQLLSVGSRDISKVDLIAAASSHGSLIPDTKETVTLVSQNLSGSISKRALAAAWNTSSKGTISVAANGNPRSDLNMTVTQASCLTLVPGSSDAISLHSSTHGPSSTLSPPSCMTLILGSNETLSLGSSLIFSDTSTLTLSSQQDCSEDNSLHTVPLAEELESWSEMPSVGVGHFPLGFPTSDTTNKDSTAFQSIPQGTFEEVDSCLVKVPEQRADGSKMALKNVISLQRNQDVLDGEEGKKMTMKKMMRQIQEEPLDSLSSSIRQQAMETLTQLSLSQPVLGLQERSELVNTCVKSVFSLPSVQAMQEKDEAKAEAIQTLYHQTFDALQTLLNALFVKDPTPAGLKSILEPLGPWMNSGKAHERARAVKINVSVLNHTLLTLPFFMSSGFPALGLLLGRLILRIGDPDEEIGREALDGITILYTILELQKRARDKEETNRKELYESNKRFLGPYNPVSPCQNILRVIAEFGDFLGPQQVKDLLLAALEGLKGGSEARGKDSGEMMQLASEITLTSVLEWYRHRALEVIPEIMQGIYAHLSHIQEPRAREVALLPISLLASSFMTEVVVALLMCPLPLDSNGAEMWRQLILRKPSCDVRDLLDLLLTSLKEKPVTKKGRASIVPLAAASGLCELLSVNSCMGRVRRIYPQLLLALLIQVHYHIGLNLPGRVASHKDPKKDAQPSSFVPVRWVVKVVKTLLLKMGCSYEATFLEDQGGWELMGQAENHHRGVSLLARAMVHYSCQELCRILYLLIPLLERGDEKHKITATAFFVELLQMEQVRRIPEEYSLGRMAEGLGHRDPIMKVLSIRGLVILARRTEKTAKVQALLPSMVKGLKSVDGLLVVEAVHSLKTLFKGQDRKLTDSSVYVEMLQVLLPHFSDSREDVRSSCINMYGKVVQKLRSPRTSAMEEQLVSTLVPLLLTMQEGNAKVSQKCVKTLFRCSCFMAWELPKRAYSRKPWDYQQQTVAKICKYLVDTHRDSAFTFLSQSLEFAKSSRASLRKTSVMFIGSLVPCMESIMTEDRQNEVKAALENLRHDPEASVCIHAAQAQNILASCWRNSWPLPHGDSWVCDPATTHRWNPSCENLPTSHQRRSWIMQALSSWKMSMKQ", "length": 1325, "header": "tr|F1S770-1|F1S770_PIG Isoform 1 of Maestro heat like repeat family member 7 OS=Sus scrofa OX=9823 GN=MROH7 PE=4 SV=5 CANONICAL=F1S770-1" }, "isoforms": [ { "isoform_ac": "F1S770-1", "url": "https://www.uniprot.org/uniprotkb/F1S770/entry#F1S770-1", "sequence": { "sequence": "MALCPGASLAPLEDSDMTPSLNSTPPSPQLPGLASGPISGPNPDVDLAPILNPPPSPGLALVPDLNPTLSPVSEETPGLGSDNTPRPDESWDSAPASLQVTAAHSGEDPGLDSNQVSRPPSQGALCAASSLLLSPGSTEAKGLSSGNHSGPNSEVAFNSEGKPFDLGQSNSNPSRPESNPLERPYSKEDLVLGHSISRPGSKALLIPASNASLDPDSNQLLSVGSRDISKVDLIAAASSHGSLIPDTKETVTLVSQNLSGSISKRALAAAWNTSSKGTISVAANGNPRSDLNMTVTQASCLTLVPGSSDAISLHSSTHGPSSTLSPPSCMTLILGSNETLSLGSSLIFSDTSTLTLSSQQDCSEDNSLHTVPLAEELESWSEMPSVGVGHFPLGFPTSDTTNKDSTAFQSIPQGTFEEVDSCLVKVPEQRADGSKMALKNVISLQRNQDVLDGEEGKKMTMKKMMRQIQEEPLDSLSSSIRQQAMETLTQLSLSQPVLGLQERSELVNTCVKSVFSLPSVQAMQEKDEAKAEAIQTLYHQTFDALQTLLNALFVKDPTPAGLKSILEPLGPWMNSGKAHERARAVKINVSVLNHTLLTLPFFMSSGFPALGLLLGRLILRIGDPDEEIGREALDGITILYTILELQKRARDKEETNRKELYESNKRFLGPYNPVSPCQNILRVIAEFGDFLGPQQVKDLLLAALEGLKGGSEARGKDSGEMMQLASEITLTSVLEWYRHRALEVIPEIMQGIYAHLSHIQEPRAREVALLPISLLASSFMTEVVVALLMCPLPLDSNGAEMWRQLILRKPSCDVRDLLDLLLTSLKEKPVTKKGRASIVPLAAASGLCELLSVNSCMGRVRRIYPQLLLALLIQVHYHIGLNLPGRVASHKDPKKDAQPSSFVPVRWVVKVVKTLLLKMGCSYEATFLEDQGGWELMGQAENHHRGVSLLARAMVHYSCQELCRILYLLIPLLERGDEKHKITATAFFVELLQMEQVRRIPEEYSLGRMAEGLGHRDPIMKVLSIRGLVILARRTEKTAKVQALLPSMVKGLKSVDGLLVVEAVHSLKTLFKGQDRKLTDSSVYVEMLQVLLPHFSDSREDVRSSCINMYGKVVQKLRSPRTSAMEEQLVSTLVPLLLTMQEGNAKVSQKCVKTLFRCSCFMAWELPKRAYSRKPWDYQQQTVAKICKYLVDTHRDSAFTFLSQSLEFAKSSRASLRKTSVMFIGSLVPCMESIMTEDRQNEVKAALENLRHDPEASVCIHAAQAQNILASCWRNSWPLPHGDSWVCDPATTHRWNPSCENLPTSHQRRSWIMQALSSWKMSMKQ", "length": 1325, "header": "tr|F1S770-1|F1S770_PIG Isoform 1 of Maestro heat like repeat family member 7 OS=Sus scrofa OX=9823 GN=MROH7 PE=4 SV=5 CANONICAL=F1S770-1" }, "locus": { "chromosome": "6", "start_pos": 157715042, "end_pos": 157657631, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004257.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004257.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004161.5", "url": "https://www.ensembl.org/id/ENSSSCP00000004161.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 558, "start_aa": "Thr", "end_pos": 558, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr558", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S770", "url": "https://www.uniprot.org/uniprotkb/F1S770" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1S770", "url": "https://www.uniprot.org/uniprotkb/F1S770" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" }, { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" }, { "start_pos": 257, "end_pos": 259, "annotation": "n_glycosylation_sequon" }, { "start_pos": 272, "end_pos": 274, "annotation": "n_glycosylation_sequon" }, { "start_pos": 292, "end_pos": 294, "annotation": "n_glycosylation_sequon" }, { "start_pos": 337, "end_pos": 339, "annotation": "n_glycosylation_sequon" }, { "start_pos": 588, "end_pos": 590, "annotation": "n_glycosylation_sequon" }, { "start_pos": 593, "end_pos": 595, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S770-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1325, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S770-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S770" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S770" }, { "id": "PF23210", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23210" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MROH2B-like HEAT-repeats", "eco_id": "ECO_0000259", "start_pos": 456, "end_pos": 553, "start_aa": "Gly", "end_aa": "Phe", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1S770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S770" }, { "id": "PF21047", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21047" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Maestro-like HEAT-repeats", "eco_id": "ECO_0000259", "start_pos": 579, "end_pos": 812, "start_aa": "His", "end_aa": "Cys", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1S770", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S770" }, { "id": "PF23227", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23227" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Maestro/Maestro-like HEAT-repeats", "eco_id": "ECO_0000259", "start_pos": 1006, "end_pos": 1269, "start_aa": "Leu", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S793-1", "uniprot_ac": "F1S793", "uniprot_id": "F1S793_PIG", "mass": { "chemical_mass": 93577.0, "monoisotopic_mass": 93577.0 }, "refseq": {}, "gene_names": [ { "name": "CCDC15", "type": "recommended", "evidence": [ { "id": "F1S793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S793" } ] } ], "protein_names": [ { "name": "Coiled-coil domain containing 15", "type": "synonym", "evidence": [ { "id": "F1S793", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S793/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S793", "url": "https://www.uniprot.org/uniprotkb/F1S793" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC15", "url": "https://www.uniprot.org/uniprotkb/F1S793", "locus": { "chromosome": "9", "start_pos": 52217674, "end_pos": 52147082, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015206", "url": "https://www.ensembl.org/id/ENSSSCG00000015206" } ] } } ], "crossref": [ { "id": "F1S793", "url": "https://alphafold.ebi.ac.uk/entry/F1S793", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015206", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015206", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR037693", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037693", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR14817", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14817", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14817:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14817:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF28517", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28517", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1S793", "url": "https://www.uniprot.org/uniprotkb/F1S793", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S793-1", "url": "https://www.uniprot.org/uniprotkb/F1S793-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRSMAPLKKPRNSTKLPLALNPLKSKDVLTVLAERNQAVVPVGAWVEPAPPGSTEVPAHTSAYMIEEELKEQLRKKQEALKHFQRQVKRRVNQQIRLRKKQQLQRSYEAAEKEGSIAMHSSAPAQLTPKRTSIFLNTLNAAIGSARLPPSQMLEDGIEDRENQNELFQQAQALSQTMKQARHRLASFKTVNEKNAPVFPDDRKKSLANQEKAICRKPAFAKINIGVRRELPFEVQQGLSTPVPYQKFMEDQEPDSEEFSSILIDKKGKENLSWGDQQDLLSEDKDIPFSRVQKVHFKNPLFSVMEEEEVKQLRQGVLPQARDYFPEAQGDQLQAQSGLTGVLSVELEAQKIEPRLNTQDNELESQTIELKAQAVKIETPKSVMMKSQSIELEDGNIVSEVQDFLPQNQAFFPKDQNILLKCQDKDVLPKEQYVLPNNQNILPKYQDHHFLTEDKNILPGCQEQNFLLEDQNILPSSQDQNFLPNGQHVLSKEQDVLPTCQDQNFPPRDQKANLKQPASLLVGRSRREVFPLDVHQDLLHRHEDQAFIRGKKVRFKESYCDMTEKGREDFSLAGYQYLTPKFQDQVIIRDQNKYIKELSSFEKWEIERGIASGVPWVCFTSYSGLRQKQYLRYRRLFMDIEREQVKEQQRQNEHRKKIEKIKKKKEQQRYAEEQRILRMNFHEEPYSGEKMSEILAQLQLEEIKGAKEKQQKEKEYQRYVEALRAQIQEKMQLYNITLPPLCCCGPDFWDAHPDTCANNCIFYKNHRAYTRALHSVINSCDLPEGNSTLRVAIRNFASACRRTLKNL", "length": 807, "header": "tr|F1S793-1|F1S793_PIG Isoform 1 of Coiled-coil domain containing 15 OS=Sus scrofa OX=9823 GN=CCDC15 PE=4 SV=4 CANONICAL=F1S793-1" }, "isoforms": [ { "isoform_ac": 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containing 15 OS=Sus scrofa OX=9823 GN=CCDC15 PE=4 SV=4 CANONICAL=F1S793-1" }, "locus": { "chromosome": "9", "start_pos": 52215029, "end_pos": 52147082, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016572.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016572.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016127.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016127.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., 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"id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 874, "start_aa": "Thr", "end_pos": 874, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr874", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S795", "url": "https://www.uniprot.org/uniprotkb/F1S795" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "establishment of endothelial barrier", "id": "GO:0061028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061028", "evidence": [ { "database": "UniProtKB", "id": "F1S795", "url": "https://www.uniprot.org/uniprotkb/F1S795" } ], "pmid": "" }, { "name": "angiogenesis", "id": "GO:0001525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001525", "evidence": [ { "database": "UniProtKB", "id": "F1S795", "url": "https://www.uniprot.org/uniprotkb/F1S795" } ], "pmid": "" }, { "name": "cell-cell adhesion", "id": "GO:0098609", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098609", "evidence": [ { "database": "UniProtKB", "id": "F1S795", "url": "https://www.uniprot.org/uniprotkb/F1S795" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "external side of plasma membrane", "id": "GO:0009897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009897", "evidence": [ { "database": "UniProtKB", "id": "F1S795", "url": "https://www.uniprot.org/uniprotkb/F1S795" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "signaling receptor activity", "id": "GO:0038023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038023", "evidence": [ { "database": "UniProtKB", "id": "F1S795", "url": "https://www.uniprot.org/uniprotkb/F1S795" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1038, "end_pos": 1040, "annotation": "n_glycosylation_sequon" }, { "start_pos": 246, "end_pos": 248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 360, "end_pos": 362, "annotation": "n_glycosylation_sequon" }, { "start_pos": 389, "end_pos": 391, "annotation": "n_glycosylation_sequon" }, { "start_pos": 396, "end_pos": 398, "annotation": "n_glycosylation_sequon" }, { "start_pos": 655, "end_pos": 657, "annotation": "n_glycosylation_sequon" }, { "start_pos": 680, "end_pos": 682, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S795-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1049, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S795-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S795" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S795", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S795" }, { "id": "PS50853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 248, "end_pos": 345, "start_aa": "Thr", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1S795", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S795" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 32, "end_pos": 131, "start_aa": "Pro", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S796-1", "uniprot_ac": "F1S796", "uniprot_id": "F1S796_PIG", "mass": { "chemical_mass": 147780.0, "monoisotopic_mass": 147780.0 }, "refseq": {}, "gene_names": [ { "name": "ROBO3", "type": "recommended", "evidence": [ { "id": "F1S796", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S796" } ] } ], "protein_names": [ { "name": "Roundabout homolog 3", "type": "recommended", "evidence": [ { "id": "F1S796", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S796/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Receptor involved in axon guidance during development. Acts as a multifunctional regulator of pathfinding that simultaneously mediates NELL2 repulsion, inhibits SLIT repulsion, and facilitates Netrin-1/NTN1 attraction. In spinal cord development plays a role in guiding commissural axons probably by preventing premature sensitivity to Slit proteins thus inhibiting Slit signaling through ROBO1/ROBO2. Binding OF NELL2 to the receptor ROBO3 promotes oligomerization of ROBO3, resulting in the repulsion of commissural axons in the midline. ROBO3 also indirectly boosts axon attraction to NTN1 without interacting with NTN1 itself.", "evidence": [ { "database": "UniProtKB", "id": "F1S796", "url": "https://www.uniprot.org/uniprotkb/F1S796#function" }, { "database": "UniProtKB", "id": "ARBA00054174", "url": "https://www.uniprot.org/uniprotkb/ARBA00054174#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S796", "url": "https://www.uniprot.org/uniprotkb/F1S796" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ROBO3", "url": "https://www.uniprot.org/uniprotkb/F1S796", "locus": { "chromosome": "9", "start_pos": 52081625, "end_pos": 52065499, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015202", "url": "https://www.ensembl.org/id/ENSSSCG00000015202" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015202", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015202", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00063", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00063", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051170", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051170", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12231", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12231", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12231:SF236", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12231:SF236", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZKM4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKM4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKM4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKM4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S796", "url": "https://www.uniprot.org/uniprotkb/F1S796", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S796-1", "url": "https://www.uniprot.org/uniprotkb/F1S796-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRYLLKTLLQMNLFADSLAGDISNSSDLFFGFNSSATALNQSLLPPGDPSVNGSRVGPEDAMPRIVEQPPDLLVSRGEPATLPCRAEGRPRPNIEWYKNGARVATAREDPRAHRLLLPSGALFFPRIVHGRRARPDEGVYTCVARNYLGAAASRNASLEVAVLRDDFRQSPGNLVVAVGEPAVMECVPPRGHPEPSVSWKKDGARLKEEEGRITIRGGKLMMSLTLKSDAGMYVCVASNMAGERESGAAKLVVLERPSFLRRPVNQVVLADAPVDFPCEVQGDPPPRLSWRKEDGELPTGRYEIRSDHSLWISRVSAEDEGTYTCVAENSVGRAEASSSLSVHVPPQLVTQPQDQMVAPGESVAFQCETKGNPPPAIFWQKEGSQALLFPSQSLQPTGRFSVSPRGQLNITEVQSGDAGYYVCQAVSVAGSILAKALLEVKGASLDGLPPIILQGPANQTLALGSSVWLPCRVTGNPQPSVQWLKDGQWLQGDDVQLNLMANGTLYITNVQETHMGFYSCVAKSPTGEATWSGWLRRQEDWGGSPDPPTEPSSPPGPPSQPVVTEISKNSITLAWKPNPQAGAAVTSYVIEAFSQAAGNTWRTVADGVQLETHTVSGLQPNTIYLFLVRAVGAWGLSEPSPVSEPVRTLNSNPSRPVEDPWRGQRGLAEVAVRMQEPIVLGPRTLKVSWTVDGPVQLVQGFRVSWRVAGPDGGSWTLLDLQSPSQQSTVLRGLPPGTQIQIKVQAQGQEGLGAESPFVTRSIPEEVPSGPPQGVAVALGGEGNSSITVSWQPPLPSQQNGVIKEYQIWCLGNESRFHLNRSAAGWARSAVLRGLLPGLLYRTQVAAATSAGVGVASAPVSVLLPSPPELEPGLEVGPGLAERLARVLREPAFLAGSGAACGALLLGLCAALYRRRRQRKELSHYTASFAYTPAVSFPHSEGLSAASSRPPIGLGPAPYPWLADSWPHPSRSPSAQEPRGSCFPSNPDPDDRYYNEAGISLYLAQTARGTAAPVEGPVYSTIDPAGEELQTFHGGFPPHPSGEPGTWSQYAPPEWSEGDSGARGGKVKLLGKPVQMPSLSWPEALPPPPPSCELGCLEGPEEELEGGSGPEEWCPPVPERSHVAEPSSSGGCLVPLSRAETPSPTPSYGQQSTATLTPSPPDPPRPPTDIPHLHQMPRRVPLGPSSPLSVSQPTLGSHEGRPAGPGAGHTAPHHLIPSPVPGIASSAPGRALQVPGEMTPPLHGPRARIRKKPKAIPYRREHSPGDLPPPPLPPPEEEASWAVGLRAAGSMSSLEREREQSGERRMVQAGPLGAQRGPHLDEEAWLPYSRPSFLSRGQGTSTCSTAGSNSSRGSGSSRGSRGPGRSRSRSRSQSQRPGGQKRGEEPR", "length": 1387, "header": "tr|F1S796-1|F1S796_PIG Isoform 1 of Roundabout homolog 3 OS=Sus scrofa OX=9823 GN=ROBO3 PE=3 SV=3 CANONICAL=F1S796-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKM4-1", "url": "https://www.uniprot.org/uniprotkb/F1S796/entry#A0A286ZKM4-1", "sequence": { "sequence": "MQEPIVLGPRTLKVSWTVDGPVQLVQGFRVSWRVAGPDGGSWTLLDLQSPSQQSTVLRGLPPGTQIQIKVQAQGQEGLGAESPFVTRSIPEEVPSGPPQGVAVALGGEGNSSITVSWQPPLPSQQNGVIKEYQIWCLGNESRFHLNRSAAGWARSAVLRGLLPGLLYRTQVAAATSAGVGVASAPVSVLLPSPPELEPGLEVGPGLAERLARVLREPAFLAGSGAACGALLLGLCAALYRRRRQRKELSHYTASFAYTPAVSFPHSEGLSAASSRPPIGLGPAPYPWLADSWPHPSRSPSAQEPRGSCFPSNPDPDDRYYNEAGISLYLAQTARGTAAPVEGPVYSTIDPAGEELQTFHGGFPPHPSGEPGTWSQYAPPEWSEGDSGARGGKVKLLGKPVQMPSLSWPEALPPPPPSCELGCLEGPEEELEGGSGPEEWCPPVPERSHVAEPSSSGGCLVPLSRAETPSPTPSYGQQSTATLTPSPPDPPRPPTDIPHLHQMPRRVPLGPSSPLSVSQPTLGSHEGRPAGPGAGHTAPHHLIPSPVPGIASSAPGRALQVPGEMTPPLHGPRARIRKKPKAIPYRREHSPGDLPPPPLPPPEEEASWAVGLRAAGSMSSLEREREQSGERRMVQAGPLGAQRGPHLDEEAWLPYSRPSFLSRGQGTSTCSTAGSNSSRGSGSSRGSRGPGRSRSRSRSQSQRPGGQKRGEEPR", "length": 713, "header": "tr|A0A286ZKM4-1|A0A286ZKM4_PIG Computationally mapped isoform of Roundabout guidance receptor 3 OS=Sus scrofa OX=9823 GN=ROBO3 PE=4 SV=3 CANONICAL=F1S796-1" }, "locus": { "chromosome": "9", "start_pos": 52081381, "end_pos": 52075424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046851.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046851.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032132.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032132.3" } ] } }, { "isoform_ac": "F1S796-1", "url": "https://www.uniprot.org/uniprotkb/F1S796/entry#F1S796-1", "sequence": { "sequence": 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"MAELPGPFLCGALLGFLCLSGLAVEVKVPTEPLSTPLGKTAELTCTYSTSVGDSFALEWSFVQPGKPISESHPILYFTNGHLYPTGSKSKRVSLLQNPPTVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTNGLGLINLTVLVPPSNPLCSQSGQTSVGGSTALRCSSSEGAPKPVYNWVRLGTFPTPSPGSMVQDEVSGQLILTNLSLTSSGTYRCVATNQMGSASCELTLSVTEPSQGRVAGALIGVLLGVLLLSVAAFCLVRFQKERGKKPKETYGGSDLREDAIAPGISEHTCMRADSSKGFLERPSSASTVTTTKSKLPMVV", "length": 327 }, "evidence": [ { "id": "F1S799", "url": "https://omabrowser.org/oma/group/F1S799/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z109-1", "protein_name": "V-set and immunoglobulin domain-containing protein 2", "gene_name": "Vsig2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAWPLVGAFLCGHLLGFVCLSGLAVEVTVPTEPLSVPKGKTAELSCSYKTSVGDNFALEWSFVQPGKPISASVPVLYFTNGHLYPTGSKADRAILLHDPPTGGLATLKLTDLRPSDTGTYLCNVNNPPDFYTNGLGLINLTVLVPPSHPLCSQSGQTSVGGSAALGCRSSEGAPKPVYNWERLGSSPTPPPGSMVQDEVSGQLILTNLSLTSSGTYRCVASNQMGSASCELNLSVTDSSEGRVAGTLIGVLLGVLLLSVAAFCLIRFQKERKKEPKETYGGSDLREDATAPGVFEQASMRADHSKELLEKSPCASTMTTTKSKLSMVV", "length": 328 }, "evidence": [ { "id": "F1S799", "url": "https://omabrowser.org/oma/group/F1S799/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1S799", "url": "https://www.uniprot.org/uniprotkb/F1S799" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 142, "end_pos": 144, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S799-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 331, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S799-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S799" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S799", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S799" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 129, "start_aa": "Pro", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 191 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 142, "end_pos": 144 }, { "start_pos": 210, "end_pos": 212 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S7B2-1", "uniprot_ac": "F1S7B2", "uniprot_id": "F1S7B2_PIG", "mass": { "chemical_mass": 59226.0, "monoisotopic_mass": 59226.0 }, "refseq": { "ac": "XP_013834980", "name": "sialate O-acetylesterase isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013834980" }, "gene_names": [ { "name": "SIAE", "type": "recommended", "evidence": [ { "id": "F1S7B2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" } ] }, { "name": "SIAE", "type": "synonym", "evidence": [ { "id": "XP_013834980", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013834980" } ] } ], "protein_names": [ { "name": "Sialate O-acetylesterase", "type": "recommended", "evidence": [ { "id": "F1S7B2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7B2/entry#names_and_taxonomy" } ] }, { "name": "3.1.1.53", "type": "synonym", "evidence": [ { "id": "F1S7B2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7B2/entry#names_and_taxonomy" } ] }, { "name": "Sialic acid-specific 9-O-acetylesterase", "type": "synonym", "evidence": [ { "id": "F1S7B2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7B2/entry#names_and_taxonomy" } ] }, { "name": "sialate O-acetylesterase isoform X1", "type": "synonym", "evidence": [ { "id": "XP_013834980", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013834980" } ] } ], "function": [ { "annotation": "Catalyzes the removal of O-acetyl ester groups from position 9 of the free diacetylated sialate N-acetyl-9-O-acetylneuraminate (Neu5,9Ac2) in the cytosol and of the diacetylated sialate residues of sialylglycoconjugates in the lysosomes. Together with the sialate-O-acetyltransferase they regulate the balance of acetylated sialoglycoconjugates, key players in various processes such as cell-cell interactions, host-pathogen recognition, and tumor antigenicity.", "evidence": [ { "database": "UniProtKB", "id": "I3LKR4", "url": "https://www.uniprot.org/uniprotkb/I3LKR4#function" }, { "database": "UniProtKB", "id": "ARBA00057218", "url": "https://www.uniprot.org/uniprotkb/ARBA00057218#function" }, { "database": "UniProtKB", "id": "A0A8W4FIL2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIL2#function" }, { "database": "UniProtKB", "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SIAE", "url": "https://www.uniprot.org/uniprotkb/F1S7B2", "locus": { "chromosome": "9", "start_pos": 51879224, "end_pos": 51918827, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015196", "url": "https://www.ensembl.org/id/ENSSSCG00000015196" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015196", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015196", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100521812", "url": "https://www.ncbi.nlm.nih.gov/gene/100521812", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005181", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005181", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036514", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036514", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039329", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039329", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521812", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521812", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PCEFKAC", "url": "https://omabrowser.org/oma/group/PCEFKAC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S7B2", "url": "https://www.orthodb.org/?gene=F1S7B2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LKR4", "url": "https://www.orthodb.org/?gene=I3LKR4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22901", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22901", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22901:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22901:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03629", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03629", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF28112", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28112", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013834980", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013834980", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "22600", "url": "https://www.rhea-db.org/rhea/22600", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "80763", "url": "https://www.rhea-db.org/rhea/80763", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4FIL2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIL2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FIL2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FIL2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7B2-1", "url": "https://www.uniprot.org/uniprotkb/F1S7B2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKR4", "url": "https://www.uniprot.org/uniprotkb/I3LKR4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKR4-1", "url": "https://www.uniprot.org/uniprotkb/I3LKR4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVALGFVFGLVLSLLLPADASADVGFRFASYIDNYMVLQKEPAGAVIWGYGVSGATVTVTLCQDQETIMKKVTSVKAPSSSWMVVLDPVKPGGPYEVIAQQTYGRMNFTLRVHDVLFGDVWLCSGQSNMQMTVSQIFNATSELSDTAAYQSVRILAVSLNQALQELEDLAGVDLRWSKPTSENLGHGDFKYMSAVCWLFGRYLYDTLQYPVGLIASSWAGTPIEAWSSERSLKACGVPRFIPSDFGTGPSENSVLWNAMVHPLHNMTLKGVIWYQGESNINFNRDLYNCTFPALIEDWRQTFHRGSQGQTERFFPFGFVQLSSFLSGATSSEGLPHIRWHQTADFGYVPNLRMPNTFMAVAMDLCDRNSPFGSAHPRDKQTVAYRLHLGARAVAYGEKLTFQGPLPQKMELLADRGLLNLTYSQQILVQRQDKKIFEVSCCSDQQCKWLPAPMDTFSTQTLALDITSCQDTLVAVRYAWSTWPCEYKQCPLYHPTSTLPAPPFTAFITNQIPDDLSKGQMISMHYDHILL", "length": 530, "header": "tr|F1S7B2-1|F1S7B2_PIG Isoform 1 of Sialate O-acetylesterase OS=Sus scrofa OX=9823 GN=SIAE PE=4 SV=3 CANONICAL=F1S7B2-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FIL2-1", "url": "https://www.uniprot.org/uniprotkb/F1S7B2/entry#A0A8W4FIL2-1", "sequence": { "sequence": "MVLQKEPAGAVIWGYGVSGATVTVTLCQDQETIMKKVTSVKAPSSSWMVVLDPVKPGGPYEVIAQQTYGRMNFTLRVHDVLFGDVWLCSGQSNMQMTVSQIFNATSELSDTAAYQSVRILAVSLNQALQELEDLAGVDLRWSKPTSENLGHGDFKYMSAVCWLFGRYLYDTLQYPVGLIASSWAGTPIEAWSSERSLKACGVPRGFIPSDFGTGPSENSVLWNAMVHPLHNMTLKGVIWYQGESNINFNRDLYNCTFPALIEDWRQTFHRGSQGQTERFFPFGFVQLSSFLSGATSSEGLPHIRWHQTADFGYVPNLRMPNTFMAVAMDLCDRNSPFGSAHPRDKQTVAYRLHLGARAVAYGEKLTFQGPLPQKMELLADRGLLNLTYSQQILVQRQDKKIFEVSCCSDQQCKWLPAPMDTFSTQTLALDITSCQDTLVAVRYAWSTWPCEYKQCPLYHPTSTLPAPPFTAFITNQIPDDLSKGK", "length": 485, "header": "tr|A0A8W4FIL2-1|A0A8W4FIL2_PIG Computationally mapped isoform of Sialate O-acetylesterase OS=Sus scrofa OX=9823 GN=SIAE PE=4 SV=1 CANONICAL=F1S7B2-1" }, "locus": { "chromosome": "9", "start_pos": 51913992, "end_pos": 51880452, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100376.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100376.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078153.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078153.1" } ] } }, { "isoform_ac": "F1S7B2-1", "url": "https://www.uniprot.org/uniprotkb/F1S7B2/entry#F1S7B2-1", "sequence": { "sequence": "MVALGFVFGLVLSLLLPADASADVGFRFASYIDNYMVLQKEPAGAVIWGYGVSGATVTVTLCQDQETIMKKVTSVKAPSSSWMVVLDPVKPGGPYEVIAQQTYGRMNFTLRVHDVLFGDVWLCSGQSNMQMTVSQIFNATSELSDTAAYQSVRILAVSLNQALQELEDLAGVDLRWSKPTSENLGHGDFKYMSAVCWLFGRYLYDTLQYPVGLIASSWAGTPIEAWSSERSLKACGVPRFIPSDFGTGPSENSVLWNAMVHPLHNMTLKGVIWYQGESNINFNRDLYNCTFPALIEDWRQTFHRGSQGQTERFFPFGFVQLSSFLSGATSSEGLPHIRWHQTADFGYVPNLRMPNTFMAVAMDLCDRNSPFGSAHPRDKQTVAYRLHLGARAVAYGEKLTFQGPLPQKMELLADRGLLNLTYSQQILVQRQDKKIFEVSCCSDQQCKWLPAPMDTFSTQTLALDITSCQDTLVAVRYAWSTWPCEYKQCPLYHPTSTLPAPPFTAFITNQIPDDLSKGQMISMHYDHILL", "length": 530, "header": "tr|F1S7B2-1|F1S7B2_PIG Isoform 1 of Sialate O-acetylesterase OS=Sus scrofa OX=9823 GN=SIAE PE=4 SV=3 CANONICAL=F1S7B2-1" }, "locus": { "chromosome": "9", "start_pos": 51918796, "end_pos": 51880420, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016562.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016562.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016118.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016118.3" } ] } }, { "isoform_ac": "I3LKR4-1", "url": "https://www.uniprot.org/uniprotkb/F1S7B2/entry#I3LKR4-1", "sequence": { "sequence": "MVLQKEPAGAVIWGYGVSGATVTVTLCQDQETIMKKVTSVKAPSSSWMVVLDPVKPGGPYEVIAQQTYGRMNFTLRVHDVLFGDVWLCSGQSNMQMTVSQIFNATSELSDTAAYQSVRILAVSLNQALQELEDLAGVDLRWSKPTSENLGHGDFKYMSAVCWLFGRYLYDTLQYPVGLIASSWAGTPIEAWSSERSLKACGVPRFIPSDFGTGPSENSVLWNAMVHPLHNMTLKGVIWYQGESNINFNRDLYNCTFPALIEDWRQTFHRGSQGQTERFFPFGFVQLSSFLSGATSSEGLPHIRWHQTADFGYVPNLRMPNTFMAVAMDLCDRNSPFGSAHPRDKQTVAYRLHLGARAVAYGEKLTFQGPLPQKMELLADRGLLNLTYSQQILVQRQDKKIFEVSCCSDQQCKWLPAPMDTFSTQTLALDITSCQDTLVAVRYAWSTWPCEYKQCPLYHPTSTLPAPPFTAFITNQIPDDLSKGQMISMHYDHILL", "length": 495, "header": "tr|I3LKR4-1|I3LKR4_PIG Computationally mapped isoform of Sialate O-acetylesterase OS=Sus scrofa OX=9823 GN=SIAE PE=4 SV=3 CANONICAL=F1S7B2-1" }, "locus": { "chromosome": "9", "start_pos": 51913992, "end_pos": 51880420, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024786.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024786.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024679.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024679.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521812", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521812", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7FWV5-1", "protein_name": "Sialate O-acetylesterase isoform X1", "gene_name": "Siae", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVSLGSVFGLLLLLIIVRASRSAGEVTLFFGTLAFQISYRILALVPSQGIDFRFGSYIDNYMVLQKEPSGAVIWGFGTPGATVTVTLCQGQNTFKKKVTTVKAHSNTWVVVLDPMKPGGPYEVMAKQTFGITNVTLRIHDILFGDVWLCSGQSNMKMTVLQIFNASKELAVAAAYQSVRIFSASLVQAEEELEDLDKVDLSWSRPTAGNLGNGNYTYMSAVCWLFGRYLYDNLQYPIGLVSSSWGGTPIEAWSSKRALKSCGVPNTSNERILQTTRSECKSEGSLCPLGSFTLPPSVTGPATHSVLWNAMIHPLQKMTLKGVIWYQGESNEDLNRDLYSCMFPALIDDWRQTFHDGSQKQTERFFPFGFVQLSSYAETNTSDYRFPEIRWHQTADFGFVPNLKMPNTFMAVAMDLCDLNSPFGSIHPRDKQTVAYRLHLGARALAYGEKNLAFQGPLPKKIELLAHSRLLSLTYDQKIQVHRQDNKSFEISCCSDRLCKWLPVSVNSFSTKTLILGISACRGTVVDVRYAWTTWPCDYKQCAVYHPSNTLPAPPFTAPITYQAPRFRASDSSTQE", "length": 575 }, "evidence": [ { "id": "F1S7B2", "url": "https://omabrowser.org/oma/group/F1S7B2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P70665-1", "protein_name": "Sialate O-acetylesterase", "gene_name": "Siae", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSPGPVFGIVLLIIARVSRSAGIGFRFASYIDNYMVLQKEPSGAVIWGFGTPGATVTVTLCQGQETIMKKVTSVKEPSNTWMVVLDPMKPGGPFEVMAQQTLGTMNFTLRVHDVLFGDVWLCSGQSNMQMTVSQIFNASKELSDTAAYQSVRIFSVSLIQSEEELDDLTEVDLSWSKPTAGNLGHGNFTYMSAVCWLFGRYLYDTLQYPIGLVSSSWGGTYIEVWSSRRTLKACGVPNTRDERVGQPEIKPMRNECNSEESSCPFRVVPSVRVTGPTRHSVLWNAMIHPLQNMTLKGVVWYQGESNADYNRDLYTCMFPELIEDWRQTFHYGSQGQTDRFFPFGFVQLSSYMLKNSSDYGFPEIRWHQTADFGHVPNPKMPNTFMAVAIDLCDRDSPFGSIHPRDKQTVAYRLHLGARAVAYGEKNLTFQGPLPKKIELLASNGLLNLTYDQEIQVQMQDNKTFEISCCSDRHCKWLPAPVNTFSTQTLILDLNACLGTVVAVRYAWTTWPCEYKQCAVYHTSSMLPAPPFIAQISHRGI", "length": 541 }, "evidence": [ { "id": "F1S7B2", "url": "https://omabrowser.org/oma/group/F1S7B2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P82450-1", "protein_name": "Sialate O-acetylesterase", "gene_name": "Siae", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSPRPVGLMLLLIIARVSRGAGIGFRFASYIDNYMVLQKEPSGAVIWGFGTAGATVTVTLCQGQETIMKKVTSVKGPSNTWMVVLDPMKPGGPFEVMAQQTLETTNLTLRVHDVLFGDVWLCSGQSNMQMTVLQIFNASKELSDTAAYQSVRIFSVSLTQAEEELADLDGVDLSWSKPTAGNLGHGNFTYMSAVCWLFGRYLYDTLQYPIGLVSSSWGGTPIEVWSSRRALKACGVPNTRDERVLQPEIKPMRNGCESKESSCPFRRFVPCDPVAGPATHSVLWNAMIHPLQNMTLKGVVWYQGENNANYNRDLYACMFPALIAGWRQTFHSGCQGQTERFFPFGFVQLSSYLLMNSSDYGFPEIRWHQTADFGSVPNPKMPNTFMAVAMDLCDRDSPFGSIHPRDKQTVAYRLHLGARAVAYGEKNLTFQGPLPKKIELLARNELLNLTYDQEIQVQRKDNKTFEISCCSDHQCKWLPAPVNTFSTQTLILDLSACLGTVDAVRYAWTTWPCEYKQCAVYHTSSVLPAPPFTARITHRGI", "length": 542 }, "evidence": [ { "id": "F1S7B2", "url": "https://omabrowser.org/oma/group/F1S7B2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q1LUX8-1", "protein_name": "3.1.1.53", "gene_name": "siae", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLTPVFSSLVLSAFATVLSAGEVFRFSSYYGSYMILQKAPAKSVVWGFGQTGAKVVVSLSGSHLLEQTYIAPVINGIWRTTLKPMEAGGPYTLTAYHSTTNSSIVLKDVLFGDIWLCSGQSNMAFTVGQVINATEELTMASKFPDVRIFQAALEQSKKELTDLAGVEVPWSKPTPGLLGGKDFSHFSAVCWLFGRYLYEKRKYPIGLVHSSWGGTPVEAWSSPRALQKCGLKSSVISEQNTWSSSVLWNAMIHPLLNMTITGAIWYQGEANANYNRDKYNCTFPGMIDDWRMAFHEGSEGQTALDFPFGFVQLCTYKTKDPTDGFREIRWHQTADYGFVPNKRMKNTFMAVAVDVPDEKSPWGSIHPEDKQDVAFRLVLGARAVAYGEKNVTFQGPFPTQAVLGNSYITIVFNQDIKASHEDGYFEICCSEDRKCETDDKWTPVAISSSGLNYIFLEIPPCPASITAVRYLWTDWPCKFKACPIYSYDGLLPAPPFILGVTNQRPTTVF", "length": 509 }, "evidence": [ { "id": "F1S7B2", "url": "https://omabrowser.org/oma/group/F1S7B2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9HAT2-1", "protein_name": "Sialate O-acetylesterase", "gene_name": "SIAE", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVAPGLVLGLVLPLILWADRSAGIGFRFASYINNDMVLQKEPAGAVIWGFGTPGATVTVTLRQGQETIMKKVTSVKAHSDTWMVVLDPMKPGGPFEVMAQQTLEKINFTLRVHDVLFGDVWLCSGQSNMQMTVLQIFNATRELSNTAAYQSVRILSVSPIQAEQELEDLVAVDLQWSKPTSENLGHGYFKYMSAVCWLFGRHLYDTLQYPIGLIASSWGGTPIEAWSSGRSLKACGVPKQGSIPYDSVTGPSKHSVLWNAMIHPLCNMTLKGVVWYQGESNINYNTDLYNCTFPALIEDWRETFHRGSQGQTERFFPFGLVQLSSDLSKKSSDDGFPQIRWHQTADFGYVPNPKMPNTFMAVAMDLCDRDSPFGSIHPRDKQTVAYRLHLGARALAYGEKNLTFEGPLPEKIELLAHKGLLNLTYYQQIQVQKKDNKIFEISCCSDHRCKWLPASMNTVSTQSLTLAIDSCHGTVVALRYAWTTWPCEYKQCPLYHPSSALPAPPFIAFITDQGPGHQSNVAK", "length": 523 }, "evidence": [ { "id": "F1S7B2", "url": "https://omabrowser.org/oma/group/F1S7B2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "sialate O-acetylesterase activity", "id": "GO:0001681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001681", "evidence": [ { "database": "UniProtKB", "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "lysosome", "id": "GO:0005764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005764", "evidence": [ { "database": "UniProtKB", "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" } ], "pmid": "" }, { "name": "regulation of immune system process", "id": "GO:0002682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002682", "evidence": [ { "database": "UniProtKB", "id": "F1S7B2", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 107, "end_pos": 109, "annotation": "n_glycosylation_sequon" }, { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" }, { "start_pos": 265, "end_pos": 267, "annotation": "n_glycosylation_sequon" }, { "start_pos": 288, "end_pos": 290, "annotation": "n_glycosylation_sequon" }, { "start_pos": 419, "end_pos": 421, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "22600", "name": "", "equation": "N-acetyl-9-O-acetylneuraminate + H2O = N-acetylneuraminate + acetate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "22600", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/22600" } ] }, { "id": "80763", "name": "", "equation": "an Ac-O-9-sialoglycoconjugate + H2O = a sialoglycoconjugate + acetate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "80763", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/80763" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S7B2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7B2" }, { "id": "PF03629", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03629" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sialate O-acetylesterase", "eco_id": "ECO_0000259", "start_pos": 119, "end_pos": 305, "start_aa": "Asp", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 107, "end_pos": 109 }, { "start_pos": 138, "end_pos": 140 }, { "start_pos": 265, "end_pos": 267 }, { "start_pos": 288, "end_pos": 290 }, { "start_pos": 419, "end_pos": 421 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S7F8-1", "uniprot_ac": "F1S7F8", "uniprot_id": "F1S7F8_PIG", "mass": { "chemical_mass": 36261.0, "monoisotopic_mass": 36261.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "G-protein coupled receptors family 1 profile domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1S7F8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7F8/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative odorant or sperm cell receptor.", "evidence": [ { "database": "UniProtKB", "id": "F1S7F8", "url": "https://www.uniprot.org/uniprotkb/F1S7F8#function" }, { "database": "UniProtKB", "id": "ARBA00003929", "url": "https://www.uniprot.org/uniprotkb/ARBA00003929#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S7F8", "url": "https://www.uniprot.org/uniprotkb/F1S7F8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/F1S7F8", "locus": {} } ], "crossref": [ { "id": "F1S7F8", "url": "https://alphafold.ebi.ac.uk/entry/F1S7F8", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd15913", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15913", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050939", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050939", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24242", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24242", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24242:SF396", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24242:SF396", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13853", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13853", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1S7F8", "url": "https://www.uniprot.org/uniprotkb/F1S7F8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7F8-1", "url": "https://www.uniprot.org/uniprotkb/F1S7F8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCPYIGWTNHSDPVSEFILLGFTCTWAMQIFLFSLFSVMYVLTLIGNLCITCTVWWDQHLHTPMYILLANFSFLEMWYVTSTVPSMLANFLSETKTISFSGCFLQFYFFFSVGITEDFFLSAMASDRYLAICRPLHYPRIMTKQLCTGLIVFGWSCGFILFLTPVVLISQLPYCGPNVINHFMCDPVPLMMLSCSEDTTTQLIYSTFNSIFMTGTFLFILCSYALVILAVLRMPWAASKRKAFSTCASHLAVVILFFGSVMVMYVSPGSEHPVEMQKLVTLFYSVITPLCNPLIYSLRNKEMKAALKKVFGSEISVHKT", "length": 319, "header": "tr|F1S7F8-1|F1S7F8_PIG Isoform 1 of G-protein coupled receptors family 1 profile domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=5 CANONICAL=F1S7F8-1" }, "isoforms": [ { "isoform_ac": "F1S7F8-1", "url": "https://www.uniprot.org/uniprotkb/F1S7F8/entry#F1S7F8-1", "sequence": { "sequence": 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"MSAQEEGGREAPKPKGKTLSSFFGSLPGFSSARNLVANAHSSAREARPAADTAGAPAPEATQPQAQGEWPAPWEAGALGVDPSTGTSWEHFVSTCGISRDPTRLAHSFSARGNRGINKEAATDLEQTARGTEMLSPSDKVISGAKDMVCSKMTKTKDAISSGMANMVDTAKGVVQGGLGMTRSTLTGTKDAVASGVTGAMGVAKGAVQTGVDTTKTVLTGTKDVVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGMDTTKTVLMGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKETVSTGLTGAMIVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMNVAKGAVQTGVDTTKTVLTSTEEALSTGLSGAVNVAKWAAQGSLDTSKAVLMGTKDAMSTGLNRVGNLAHGDVQTGLGTIQNWLPGPQDAIAGGLASSRAPDKKQTLPNPPEALSYEVSRYPDTLCAGLDVAGEVTTGTKGLVSAEATFIQGAELGKEEAGHGATARAHEGVQGFVTLRDELEELGEIFQPMSAEEQARLAASQSGPRVLAADQGSYFVRLGDLAPSFRQRAFEHALSHLQHGQFQARAALAQLEDAFRLIEKPQQAPDQQLLPNQDLSSTVEGAGGQEVPGAGALSRACGLVQQLHVAYSTLASGLQGLPAELQRPVGQARHSLCKLYGVISSAASVEELPAECLARSRESIGQAWQGLEQLLESVQHSPPLGWLVGPFTLHPGGQQL", "length": 1655, "header": "tr|F1S7K4-1|F1S7K4_PIG Isoform 1 of Perilipin-4 OS=Sus scrofa OX=9823 GN=PLIN4 PE=1 SV=4 CANONICAL=F1S7K4-1" }, "isoforms": [ { "isoform_ac": "A0A287AV63-1", "url": "https://www.uniprot.org/uniprotkb/F1S7K4/entry#A0A287AV63-1", "sequence": { "sequence": "MSAQEEGGREAPKPKGKTLSSFFGSLPGFSSARNLVANAHSSAREARPAADTAGAPAPEATQPQAQGEWPWLSTLRLTMSVLPHQVISGAKDMVCSKMTKTKDAISSGMANMVDTAKGVVQGGLGMTRSTLTGTKDAVASGVTGAMGVAKGAVQTGVDTTKTVLTGTKDVVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGMDTTKTVLMGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKETVSTGLTGAMIVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMNVAKGAVQTGVDTTKTVLTSTEEALSTGLSGAVNVAKWAAQGSLDTSKAVLMGTKDAMSTGLNRVGNLAHGDVQTGLGTIQNWLPGPQDAIAGGLASSRAPDKKQTLPNPPEALSYEVSRYPDTLCAGLDVAGEVTTGTKGLVSAEATFIQGAELGKEEAGHGATARAHEGVQGFVTLRDELEELGEIFQPMSAEEQGENKMAGPSSQGAGQLYNPCPSAKGTSWVEQPCLPLQLGWLPPSLGRGCLQLTRAATLCIEKPQQAPDQQLLPNQDLSSTVEGAGGQEVRTRGPALRPLPSPPLQPRSPGSFCPQVPGAGALSRACGLVQQLHVAYSTLASGLQGLPAELQRPVGQARHSLCKLYGVISSAASVEELPAECLARSRESIGQAWQGLEQLLESVQHSPPLGWLVGPFTLHPGGQQL", "length": 1624, "header": "tr|A0A287AV63-1|A0A287AV63_PIG Computationally mapped isoform of Perilipin 4 OS=Sus scrofa OX=9823 GN=PLIN4 PE=1 SV=3 CANONICAL=F1S7K4-1" }, "locus": { "chromosome": "2", "start_pos": 74329989, "end_pos": 74318874, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039144.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039144.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047756.3", "url": "https://www.ensembl.org/id/ENSSSCP00000047756.3" } ] } }, { "isoform_ac": "A0A287BNJ5-1", "url": "https://www.uniprot.org/uniprotkb/F1S7K4/entry#A0A287BNJ5-1", "sequence": { "sequence": "DAGQEAGGENNTSGLLNLNTHRLEPASSWILVGEGGRLGWEVRFLAPGPTRDQVEEVWMVKWLSTLRLTMSVLPHQVISGAKDMVCSKMTKTKDAISSGMANMVDTAKGVVQGGLGMTRSTLTGTKDAVASGVTGAMGVAKGAVQTGVDTTKTVLTGTKDVVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGMDTTKTVLMGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKETVSTGLTGAMIVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMNVAKGAVQTGVDTTKTVLTSTEEALSTGLSGAVNVAKWAAQGSLDTSKAVLMGTKDAMSTGLNRVGNLAHGDVQTGLGTIQNWLPGPQDAIAGGLASSRAPDKKQTLPNPPEALSYEVSRYPDTLCAGLDVAGEVTTGTKGLVSAEATFIQGAELGKEEAGHGATARAHEGVQGFVTLRDELEELGEIFQPMSAEEQGENKMAGPSSQGAGQLYNPCPSAKGTSWVEQPCLPLQLGWLPPSLGRGCLQLTRAATLCIEKPQQAPDQQLLPNQDLSSTVEGAGGQEVPGAGALSRACGLVQQLHVAYSTLASGLQGLPAELQRPVGQARHSLCKLYGVISSAASVEELPAECLARSRESIGQAWQGLEQLLESVQHSPPLGWLVGPFTLHPGGQQL", "length": 1588, "header": "tr|A0A287BNJ5-1|A0A287BNJ5_PIG Computationally mapped isoform of Perilipin 4 OS=Sus scrofa OX=9823 GN=PLIN4 PE=1 SV=3 CANONICAL=F1S7K4-1" }, "locus": { "chromosome": "2", "start_pos": 74329989, "end_pos": 74321805, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040006.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040006.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057651.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057651.3" } ] } }, { "isoform_ac": "F1S7K4-1", "url": "https://www.uniprot.org/uniprotkb/F1S7K4/entry#F1S7K4-1", "sequence": { "sequence": "MSAQEEGGREAPKPKGKTLSSFFGSLPGFSSARNLVANAHSSAREARPAADTAGAPAPEATQPQAQGEWPAPWEAGALGVDPSTGTSWEHFVSTCGISRDPTRLAHSFSARGNRGINKEAATDLEQTARGTEMLSPSDKVISGAKDMVCSKMTKTKDAISSGMANMVDTAKGVVQGGLGMTRSTLTGTKDAVASGVTGAMGVAKGAVQTGVDTTKTVLTGTKDVVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGMDTTKTVLMGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAMSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKETVSTGLTGAMIVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGMAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMNVAKGTVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAVNMAKGTVQTGVDTTKTVLTGTKETMSAGLTGAMGVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMGVAKGAVQTGVDTTKTVLTGTKDAVSTGLTGAMGVAKGAVQTGMDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGVDTTKTVLTGTKDTVSTGLTGAMNVAKGAVQTGMDTTKTVLTGTKDAMSTGLTGAMNVAKGAVQTGVDTTKTVLTSTEEALSTGLSGAVNVAKWAAQGSLDTSKAVLMGTKDAMSTGLNRVGNLAHGDVQTGLGTIQNWLPGPQDAIAGGLASSRAPDKKQTLPNPPEALSYEVSRYPDTLCAGLDVAGEVTTGTKGLVSAEATFIQGAELGKEEAGHGATARAHEGVQGFVTLRDELEELGEIFQPMSAEEQARLAASQSGPRVLAADQGSYFVRLGDLAPSFRQRAFEHALSHLQHGQFQARAALAQLEDAFRLIEKPQQAPDQQLLPNQDLSSTVEGAGGQEVPGAGALSRACGLVQQLHVAYSTLASGLQGLPAELQRPVGQARHSLCKLYGVISSAASVEELPAECLARSRESIGQAWQGLEQLLESVQHSPPLGWLVGPFTLHPGGQQL", "length": 1655, "header": "tr|F1S7K4-1|F1S7K4_PIG Isoform 1 of Perilipin-4 OS=Sus scrofa OX=9823 GN=PLIN4 PE=1 SV=4 CANONICAL=F1S7K4-1" }, "locus": { "chromosome": "2", "start_pos": 74329989, "end_pos": 74318874, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014759.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014759.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014361.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014361.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S7K4", "url": "https://www.uniprot.org/uniprotkb/F1S7K4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "F1S7K4", "url": "https://www.uniprot.org/uniprotkb/F1S7K4" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1S7K4", "url": "https://www.uniprot.org/uniprotkb/F1S7K4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1S7K4", "url": "https://www.uniprot.org/uniprotkb/F1S7K4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S7L3-1", 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"title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S7U5", "url": "https://www.uniprot.org/uniprotkb/F1S7U5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "G3H3L2-1", "protein_name": "Transmembrane protein 183A", "gene_name": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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] }, { "uniprot_canonical_ac": "F1S7X5-1", "uniprot_ac": "F1S7X5", "uniprot_id": "F1S7X5_PIG", "mass": { "chemical_mass": 43195.0, "monoisotopic_mass": 43195.0 }, "refseq": {}, "gene_names": [ { "name": "MTRF1L", "type": "recommended", "evidence": [ { "id": "F1S7X5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7X5" } ] } ], "protein_names": [ { "name": "Peptide chain release factor 1-like, mitochondrial", "type": "recommended", "evidence": [ { "id": "F1S7X5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7X5/entry#names_and_taxonomy" } ] }, { "name": "Mitochondrial translational release factor 1-like", "type": "synonym", "evidence": [ { "id": "F1S7X5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S7X5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Mitochondrial peptide chain release factor that directs the termination of translation in response to the peptide chain termination codons UAA and UAG.", "evidence": [ { "database": "UniProtKB", "id": "F1S7X5", "url": "https://www.uniprot.org/uniprotkb/F1S7X5#function" }, { "database": "UniProtKB", "id": "ARBA00055528", "url": "https://www.uniprot.org/uniprotkb/ARBA00055528#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S7X5", "url": "https://www.uniprot.org/uniprotkb/F1S7X5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MTRF1L", "url": "https://www.uniprot.org/uniprotkb/F1S7X5", "locus": { "chromosome": "1", "start_pos": 13458287, "end_pos": 13446492, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004076", "url": "https://www.ensembl.org/id/ENSSSCG00000004076" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004076", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004076", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000352", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000352", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005139", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005139", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045853", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045853", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "DHRVGFK", "url": "https://omabrowser.org/oma/group/DHRVGFK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR43804", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43804", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43804:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43804:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00472", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00472", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03462", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03462", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5419276", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5419276", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2RI16", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RI16", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RI16-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RI16-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7X5", "url": "https://www.uniprot.org/uniprotkb/F1S7X5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7X5-1", "url": "https://www.uniprot.org/uniprotkb/F1S7X5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRSRLLLSAVRGLWAHRAVGPARRHMSCGSLPLEELFARSGPLRTFLERQVGSETPLQVRGPELVAVAKLLTEKERELQETEHLLHDESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHLEEETSKRYNARKVQVGTKGRSEKIRTYNFPQNRVTDHRINKSLYDLGTFMQGEYLLDELVQSLKDYANYESVLEIISQKV", "length": 380, "header": "tr|F1S7X5-1|F1S7X5_PIG Isoform 1 of Peptide chain release factor 1-like, mitochondrial OS=Sus scrofa OX=9823 GN=MTRF1L PE=1 SV=2 CANONICAL=F1S7X5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RI16-1", "url": "https://www.uniprot.org/uniprotkb/F1S7X5/entry#A0A5G2RI16-1", "sequence": { "sequence": "MRSRLLLSAVRGLWAHRAVGPARRHMSCGSLPLEELFARSGPLRTFLERQVGSETPLQVRGPELVAVAKLLTEKERELQETEHLLHDESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGWY", "length": 271, "header": "tr|A0A5G2RI16-1|A0A5G2RI16_PIG Computationally mapped isoform of Mitochondrial translation release factor 1 like OS=Sus scrofa OX=9823 GN=MTRF1L PE=3 SV=1 CANONICAL=F1S7X5-1" }, "locus": { "chromosome": "1", "start_pos": 13457935, "end_pos": 13446532, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087306.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087306.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071112.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071112.1" } ] } }, { "isoform_ac": "F1S7X5-1", "url": "https://www.uniprot.org/uniprotkb/F1S7X5/entry#F1S7X5-1", "sequence": { "sequence": "MRSRLLLSAVRGLWAHRAVGPARRHMSCGSLPLEELFARSGPLRTFLERQVGSETPLQVRGPELVAVAKLLTEKERELQETEHLLHDESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSEEADENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHLEEETSKRYNARKVQVGTKGRSEKIRTYNFPQNRVTDHRINKSLYDLGTFMQGEYLLDELVQSLKDYANYESVLEIISQKV", "length": 380, "header": "tr|F1S7X5-1|F1S7X5_PIG Isoform 1 of Peptide chain release factor 1-like, mitochondrial OS=Sus scrofa OX=9823 GN=MTRF1L PE=1 SV=2 CANONICAL=F1S7X5-1" }, "locus": { "chromosome": "1", "start_pos": 13458125, "end_pos": 13446532, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004505.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004505.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004403.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004403.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S7X5", "url": "https://www.uniprot.org/uniprotkb/F1S7X5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5419276", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5419276", "resource": "Reactome", "description": "Mitochondrial translation termination" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XSH3-1", "protein_name": "Peptide chain release factor 1-like, mitochondrial", "gene_name": "MTRF1L", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGLLLRALRAARSCRAIALPAFNYEEVSGRGGAAAVRPQQPRRGLSARPRLDELFAIPSLSRLLKARVQGEARPELAARIQRLRDKERELQDTRELALQDESEDLRKLAEREIVSCEEEIAELKHQIVLLLIPSEETDNSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAVASIAGLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELKINPKDLRIETKRASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQMLCAKLYNIKLEEENKKRNSARKIQIGTKGRSEKIRTYNFPQDRITDHRISRSVHHTECFMLGEEMLDEMIKTLKEYADYESLMEIISEHEK", "length": 394 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MCM1-1", "protein_name": "Peptide chain release factor 1-like, mitochondrial", "gene_name": "MTRF1L", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRPRLVWNVFRGFWARRGVVPACRHLSCSNLPLEELFARGGALRTFLERQVGSEAQFQVRRPELVAVAKLLSDKEQELQETQHLLHDENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKNDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRYNARKIQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELVQSLKDYANYESLVEIIAKEV", "length": 380 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1QA94-1", "protein_name": "Peptide chain release factor 1-like, mitochondrial", "gene_name": "mtrf1l", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAVVSFSKHLLNVTLSRTITTHATVFRGQLCRCKALYRTINNTKRTFHTSLTANISKILSVDDIFSKQSFQDYLKKKQTEYNTSLNSINSQNQTLEDADMKTQRTNMTILAHLVHNIKKLEVKQKEMEDMQDLLKDNDPELLELAETEKEAVLADIQDLRQKILSLLIPEEESDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASASVSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTEISFTINPKDLKIETKRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLEEETSRRYQARKLQIGTRGRSEKIRTYNFQQDRITDHRIGKTVHDVHGFLQGEELLEEMIVFLQQFSEQESLMDVLDSELNL", "length": 431 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3GU28-1", "protein_name": "Peptide chain release factor 1-like, mitochondrial", "gene_name": "Mtrf1l", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MRSGFLSGARRLWALRGLSRTTSPPEELFAREGPLRAFLERRAGSEAASLDAGGNQLAAAARLLSEKERELRDTESLLHDENEDLKKLAESEIALCQKEITQLKHQIISLLVPSEETDESDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFRRWHFETLEYFPSELGGLRHASASIGGPEAYKLMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAVLPQPTEIKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNRELAMKKLRARLYSMHLEEETTKRYNARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLENFMQGDCLLDDMIQSLKDYADYESLVEMVSRKD", "length": 373 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q4V7E5-1", "protein_name": "Peptide chain release factor 1-like, mitochondrial", "gene_name": "Mtrf1l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSGFLRSARRLWARRAISRMPPPSEELLARGGPLRAFLERRVGSEAGGLDAGSPQLAAAARLLNEKERELRDTESLLHDENEDLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEIKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRLEEETAKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDLIQSLKDYSDYESLVEMISRKD", "length": 373 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BJU9-1", "protein_name": "Peptide chain release factor 1-like, mitochondrial", "gene_name": "Mtrf1l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRSGFLSGARRLWARRAFSRTPPPSEELLARGGPLRAFLERRVGSEAGGLDAGYPQLAAAARLLSEKERELRDTESLLHDENEDLKKLAESEIALCQKQITELKHQIISLLVPSEEMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASVGGPEAYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEIKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMHLEEETAKRYNARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDMIQSLKDCSDYEALVEMISRRD", "length": 373 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8RX79-1", "protein_name": "Peptide chain release factor APG3, chloroplastic", "gene_name": "APG3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNSSMTTSPTARAFLHLHSSPFTLRSRKSPSGVCLVSWPPSRSRRTRRLVCMAEPYLIRKMESVEKTWKELSVKLADPDVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARSEKIRTYNYKDSRVTDHRLKMNFALTTFLDGALEDAVQACAALEQKELMEELSESVAASSATSG", "length": 422 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9UGC7-1", "protein_name": "Peptide chain release factor 1-like, mitochondrial", "gene_name": "MTRF1L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRSRVLWGAARWLWPRRAVGPARRPLSSGSPPLEELFTRGGPLRTFLERQAGSEAHLKVRRPELLAVIKLLNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEEINKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSLKEYADYESLVEIISQKV", "length": 380 }, "evidence": [ { "id": "F1S7X5", "url": "https://omabrowser.org/oma/group/F1S7X5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VK20-1", "protein_name": "Mitochondrial translation release factor 1", "gene_name": "mRF1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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"sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S812-1", "uniprot_ac": "F1S812", "uniprot_id": "F1S812_PIG", "mass": { "chemical_mass": 72028.0, "monoisotopic_mass": 72028.0 }, "refseq": { "ac": "XP_003127999", "name": "EF-hand calcium-binding domain-containing protein 7 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127999" }, "gene_names": [ { "name": "EFCAB7", "type": "recommended", "evidence": [ { "id": "F1S812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ] }, { "name": "PGM1", "type": "recommended", "evidence": [ { "id": "F1S812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ] }, { "name": "EFCAB7", "type": "synonym", "evidence": [ { "id": "XP_003127999", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127999" }, { "id": "F1S812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ] } ], "protein_names": [ { "name": "EF-hand calcium-binding domain-containing protein 7", "type": "recommended", "evidence": [ { "id": "F1S812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S812/entry#names_and_taxonomy" } ] }, { "name": "EF-hand calcium-binding domain-containing protein 7 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003127999", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127999" } ] } ], "function": [ { "annotation": "Catalyzes the reversible isomerization of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate. The mechanism proceeds via the intermediate compound alpha-D-glucose 1,6-bisphosphate. This enzyme participates in both the breakdown and synthesis of glucose.", "evidence": [ { "database": "UniProtKB", "id": "F1S814", "url": "https://www.uniprot.org/uniprotkb/F1S814#function" }, { "database": "UniProtKB", "id": "ARBA00045679", "url": "https://www.uniprot.org/uniprotkb/ARBA00045679#function" } ] }, { "annotation": "Component of the EvC complex that positively regulates ciliary Hedgehog (Hh) signaling. Required for the localization of the EVC2:EVC subcomplex at the base of primary cilia.", "evidence": [ { "database": "UniProtKB", "id": "A0A287ARN4", "url": "https://www.uniprot.org/uniprotkb/A0A287ARN4#function" }, { "database": "UniProtKB", "id": "ARBA00053812", "url": "https://www.uniprot.org/uniprotkb/ARBA00053812#function" }, { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EFCAB7", "url": "https://www.uniprot.org/uniprotkb/F1S812", "locus": { "chromosome": "6", "start_pos": 148851183, "end_pos": 148994952, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003812", "url": "https://www.ensembl.org/id/ENSSSCG00000003812" } ] } } ], "crossref": [ { "id": "F1S812", "url": "https://alphafold.ebi.ac.uk/entry/F1S812", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003812", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003812", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "ENSSSCG00000003814", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003814", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00051", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00051", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd03085", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03085", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100522325", "url": "https://www.ncbi.nlm.nih.gov/gene/100522325", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "397566", "url": "https://www.ncbi.nlm.nih.gov/gene/397566", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005844", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005844", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005845", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005845", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016066", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016066", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036900", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036900", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052266", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052266", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522325", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522325", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KTIDKYW", "url": "https://omabrowser.org/oma/group/KTIDKYW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287A530", "url": "https://www.orthodb.org/?gene=A0A287A530", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1S812", "url": "https://www.orthodb.org/?gene=F1S812", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22573", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22573", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22573:SF37", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22573:SF37", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22573:SF60", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22573:SF60", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46819", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46819", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46819:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46819:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02878", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02878", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02879", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02879", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02880", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02880", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13499", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13499", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24947", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24947", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5635838", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5635838", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003127999", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127999", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "23536", "url": "https://www.rhea-db.org/rhea/23536", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "68748", "url": "https://www.rhea-db.org/rhea/68748", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "68752", "url": "https://www.rhea-db.org/rhea/68752", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A530", "url": "https://www.uniprot.org/uniprotkb/A0A287A530", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A530-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A530-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARN4", "url": "https://www.uniprot.org/uniprotkb/A0A287ARN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ARN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ARN4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S812-1", "url": "https://www.uniprot.org/uniprotkb/F1S812-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S814", "url": "https://www.uniprot.org/uniprotkb/F1S814", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S814-1", "url": "https://www.uniprot.org/uniprotkb/F1S814-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAISPGNDAAFSSQKSTLSESSRSKKFPLTEEELFYMNCRAAYLTVFKSSLDNIISKDQLYLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKLLTKRGEKMTREEVNAIINLADVNADGKFDYIKFCKLYMTTNEQCLKTALEKLEVDSKLRRQQFGSHIEGSPERGPSPVPKPSPRIIRKTDQESFSNKGDTRSSLLATTRKFKTSVSFTITMGANSNQNSKLTEPNSIKEWQCVQSKGCFFLEEDGEIISHQYRMQIAQRSMVYLTIKPLNLSQAEGKPSPWLSVDTALYILKESENQANLQLMCFTELQNREMFGWTGELGPGIYWLIPFTTGCRLRKEIKPITEEAQLVYRDETGELFLTKEFRSTLSDIFEVIDLDGNGLLSLEEYNFFELRTSGEKCDEDAWAVCRENFDTKKNELTRQGFMDLNLMEANDREGDPRDVWVTLHSMGYNRALELTEACPFVINIYADKCKPRIKVVHMEACSGQLEKAICKSVVNKGDAKVMDGYENVIVHTYKRDTWITSVIENKSDNKVIIHINNELSKNCINNRGLDIFAVEVAPKSTMVCQHVMPLNERQEWIYYCVYSLIL", "length": 629, "header": "tr|F1S812-1|F1S812_PIG Isoform 1 of EF-hand calcium-binding domain-containing protein 7 OS=Sus scrofa OX=9823 GN=EFCAB7 PE=4 SV=2 CANONICAL=F1S812-1" }, "isoforms": [ { "isoform_ac": "A0A287A530-1", "url": "https://www.uniprot.org/uniprotkb/F1S812/entry#A0A287A530-1", "sequence": { "sequence": "MSDFDEWISGKYRKMEEGPLPLLTFTTAPYYDQKPGTSGLRKKTYFFEAKPCYLENFIQSIFFSIDLKDRQGSSLVVGGDGRYFNKSAIETIVQMAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVGDKVYTVEKIDNFEYSDPVDGSISRNQVGGGLAVIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDLAKIYQDPQVMLAPLISIALKMSQLQERTGRTAPTVIT", "length": 583, "header": "tr|A0A287A530-1|A0A287A530_PIG Computationally mapped isoform of Phosphoglucomutase 1 OS=Sus scrofa OX=9823 GN=PGM1 PE=1 SV=3 CANONICAL=F1S812-1" }, "locus": { "chromosome": "6", "start_pos": 148887674, "end_pos": 148851777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053059.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053059.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038980.3", "url": "https://www.ensembl.org/id/ENSSSCP00000038980.3" } ] } }, { "isoform_ac": "A0A287ARN4-1", "url": "https://www.uniprot.org/uniprotkb/F1S812/entry#A0A287ARN4-1", "sequence": { "sequence": "MAISPGNDAAFSSQKSTLSESSRSKKFPLTEEELFYMNCRAAYLTVFKSSLDNIISKDQLYLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKLLTKRGEKMTREEVNAIINLADVNADGKFDYIKFCKLYMTTNEQCLKTALEKLEVDSKLRRQQFGSHIEGSPERGPSPVPKPSPRIIRKTDQESFSNKGDTRSSLLATTRKFKTSVSFTITMGANSNQNSKLTEPNSIKEWQCVQSKGCFFLEEDGEIISHQYRMQIAQRSMVYLTIKPLNLSQAEGKPSPWLSVDTALYILKESENQANLQLMCFTELQNREMFGWTGELGPGIYWLIPFTTGCRLRKEIKPITEEAQLVYRDETGELFLTKEFRSTLSDIFEVIDLDGNGLLSLEEYNFFELRTSGEKCDEDAWAVCRENFDTKKNELTRQGFMDLNLMEANDREGDPRDVWVTLHSMGYNRALELTEACPFVINIYADKCKPRIKVVHMEACSGQLEKAICKSVVNKGDAKVMDGYENVIVHTYKRDTWITSVIENKSDNKVIIHINNELSKNCINNRGLDIFAVEVAPKSTMASCCLIYLHQLIVTESVWTRTWVVSKVSQVADRELRLRVRREHVLHSASPGKDQKSK", "length": 662, "header": "tr|A0A287ARN4-1|A0A287ARN4_PIG Computationally mapped isoform of EF-hand calcium-binding domain-containing protein 7 OS=Sus scrofa OX=9823 GN=EFCAB7 PE=4 SV=2 CANONICAL=F1S812-1" }, "locus": { "chromosome": "6", "start_pos": 148994383, "end_pos": 148913749, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052439.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052439.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046613.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046613.2" } ] } }, { "isoform_ac": "F1S812-1", "url": "https://www.uniprot.org/uniprotkb/F1S812/entry#F1S812-1", "sequence": { "sequence": "MAISPGNDAAFSSQKSTLSESSRSKKFPLTEEELFYMNCRAAYLTVFKSSLDNIISKDQLYLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKLLTKRGEKMTREEVNAIINLADVNADGKFDYIKFCKLYMTTNEQCLKTALEKLEVDSKLRRQQFGSHIEGSPERGPSPVPKPSPRIIRKTDQESFSNKGDTRSSLLATTRKFKTSVSFTITMGANSNQNSKLTEPNSIKEWQCVQSKGCFFLEEDGEIISHQYRMQIAQRSMVYLTIKPLNLSQAEGKPSPWLSVDTALYILKESENQANLQLMCFTELQNREMFGWTGELGPGIYWLIPFTTGCRLRKEIKPITEEAQLVYRDETGELFLTKEFRSTLSDIFEVIDLDGNGLLSLEEYNFFELRTSGEKCDEDAWAVCRENFDTKKNELTRQGFMDLNLMEANDREGDPRDVWVTLHSMGYNRALELTEACPFVINIYADKCKPRIKVVHMEACSGQLEKAICKSVVNKGDAKVMDGYENVIVHTYKRDTWITSVIENKSDNKVIIHINNELSKNCINNRGLDIFAVEVAPKSTMVCQHVMPLNERQEWIYYCVYSLIL", "length": 629, "header": "tr|F1S812-1|F1S812_PIG Isoform 1 of EF-hand calcium-binding domain-containing protein 7 OS=Sus scrofa OX=9823 GN=EFCAB7 PE=4 SV=2 CANONICAL=F1S812-1" }, "locus": { "chromosome": "6", "start_pos": 148994383, "end_pos": 148939247, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004221.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004221.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004126.2", "url": "https://www.ensembl.org/id/ENSSSCP00000004126.2" } ] } }, { "isoform_ac": "F1S814-1", "url": "https://www.uniprot.org/uniprotkb/F1S812/entry#F1S814-1", "sequence": { "sequence": "MYCIVPAQEKIKNQNERVRSGPRKQTATMVKIVTVKTKAYQDQKPGTSGLRKRVKVFQSSANYAENFIQSIISTVEPAHRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILSTPAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGAPANSAVNCVPLEDFGGHHPDPNLTYAADLVETMKTGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGFARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGTGSDHIREKDGLWAVLAWLSILATRKQSVEDILKDHWQKYGRNFFTRYDYEEVEAEGANKMMKELEALISDRSFVGKQFPVGDKVYTVEKIDNFEYSDPVDGSISRNQVGGGLAVIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDLAKIYQDPQVMLAPLISIALKMSQLQERTGRTAPTVIT", "length": 593, "header": "tr|F1S814-1|F1S814_PIG Computationally mapped isoform of Phosphoglucomutase-1 OS=Sus scrofa OX=9823 GN=PGM1 PE=1 SV=5 CANONICAL=F1S812-1" }, "locus": { "chromosome": "6", "start_pos": 148913792, "end_pos": 148851777, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004219.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004219.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004124.5", "url": "https://www.ensembl.org/id/ENSSSCP00000004124.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522325", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522325", "resource": "KEGG Pathway" }, { "id": "R-SSC-5635838", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5635838", "resource": "Reactome", "description": "Activation of SMO" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5Y0R4-1", "protein_name": "EF-hand calcium-binding domain-containing protein 7", "gene_name": "Efcab7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASNPGSDAALDTQKSVLSGSPRTKKFPLTEQEVFYMNCRAAYLTIFKSSLENIMSKDQLYLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILSKEKPTSKADLLKSFKQLDVNDDGSILHSDLHKYLTKRGEKMTQEEVNAVISLADVNANGKFDYVKFCKLYMATSEQCLKTTLERLEADSKLRRQQFGSQMEGSPERDPSPVPKPSPRIIRKNDQETFSSKGDTSHTLLSTTRKFKTSVSFTMPMSANSNRDSTLTEPNLKDWQCAQSRGCFFLEEDGEVVSHQYKMHIAQRSVLYLTIKPLNLSQVEGKHSPWLSVDTALYILKKNENPAEAQLMCFTELRNREVFGWTGELEPGIYWLIPSTTGCRLRKETKPVTEEVQLVHRDETGELSLTSEFRSTLSEIFEIIDLDGNGLISLEEYNFFELRTSGEKCDEDAWAVCRENFDTKKNELTRQGFMDLHLMEANDREGDPLDLWVTLHSMGYNTALELTEACPFVINVYAERCKPRIKAVHMEACSGQLERAICKSVLDRSNAKVMDGYENIVVHTCNQDSWITSIIENKSDDKVIIHINNELSKNCVNNRGLNIFAVEVAPRSTMLSVFICRFVNM", "length": 615 }, "evidence": [ { "id": "F1S812", "url": "https://omabrowser.org/oma/group/F1S812/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZZ82-1", "protein_name": "EF-hand calcium-binding domain-containing protein 7", "gene_name": "EFCAB7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGMASSPGSNASLSDQKGTRSEGSQAKKSQHAEEAIFYKSCRAAYLTVLKSSLENIKSKEQLTLVLQQAGRNPSQKTVNKYWTSQTTTLNFDDFCTILKEETPATKTELLEAFGKIDTDNTGYILHDELHKLLTTEGEKMTLDEVSAITKLPDFNCNGKLDYKKFCDLYTTTSEQCCRTALEKLEADSRLRHRQFGSEAETAPEGITLPGSKPSLKIVRKTDHKPAPTKGDSRTPSRSAQSCKASSSSTISMCASSSRSTNLIEPNTMKEWQCAQSRGCFYLEEDGEIVSHKYRLHLPQRSTVCITIKPLHLRQIEGKSCHWLSVDTVLYVLKENETQENLQLVCFTDQQNKEMFGWKGELPSGVYWLLPFTTGCRLKKVKSQITGEAKLVYRDEDGELALTKEFRAALLDIFETIDLDGNGLLSLEEYNFFELRTSGETCDEEVWAVCKENFDMKKNELTRQGFMDLNLMEANDREGDPSDLWVTLLSLGYNKALEMTEACPFVIDIYAEKCKPRIKAIYLEAGSWQLNRAICKSVVNKGDAKVMDGCENIIVYTYRTGMRITSVIENKSDNKVIVHVNNEQSRNCLSNRGLAVFAVEVAPKSMMVSQHVMPLNEQEEWLYNCVHSLLR", "length": 630 }, "evidence": [ { "id": "F1S812", "url": "https://omabrowser.org/oma/group/F1S812/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7GTB7-1", "protein_name": "EF-hand calcium-binding domain-containing protein 7", "gene_name": "Efcab7", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNPGSDAALGTQISMHLGSPRVKKLSLTEQEVFYMNCRAAYLTIFKSSLENIISKDQLYLAHNIWSDISIPSRHRRTTALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILSKEEPTSKAELLKSFKQLDVNDDGSILHSDLYKYLTKRGEKMTQEEVNAVINLADVNADGKFDYIKFCELYMTTSEQCLKTTLERLEADRKLRRQQFGSHMEGSPERDQSPAPKQSPRIIRKDDQETFANKGDTSHSLLSTTRKFKTSVSFTITMSANSNQDSKLTEPNLKDWQCAQSKGCFFLEEDGEVISHQYKMHIPQRSVLYLTIKPLNLSQIEGKCSPWLSVDTALYILKENEDQAEPQLMCFTELQNREVFGWTGELGPGIYWLIPSTTGCRLRKEIKPVTEEAQLVYRDETGELFLTSEFRSTLSEIFEVIDLDGNGLISLEEYNFFELRTSGEKCDEDAWAVCRENFDTKKNELTKQGFMDLHLMEANDREGDPLDLWVTLHSMGYNKALQLTEACPFIINIYAEKCKPKIKAVHMEACSGQLERAICKSVLDRSDAKVMDGYENIIVHTCNYDTWITSIIENKTYNFLQSDDKVIIHINNELSKNCVNNRGLNIFAVEVAPRSTMVCQHVMPLNEQQEWIYYCVYSLIS", "length": 652 }, "evidence": [ { "id": "F1S812", "url": "https://omabrowser.org/oma/group/F1S812/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A8K855-1", "protein_name": "EF-hand calcium-binding domain-containing protein 7", "gene_name": "EFCAB7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAISPRSDATFSSQKSTPSESPRTKKFPLTEEEIFYMNCRAAYLTVFKSSLENIISKDQLYLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKFLTKRGEKMTREEVNAIINLADVNADGKFDYIKFCKLYMTTNEQCLKTTLEKLEVDSKLMRHQFGNHIEGSPERDPSPVPKPSPKITRKTDPETFLNKGDTRSSLLSATRKFKTSVSFTVTMGANGNRNSKLMEPNLIKDWQHMQSKGCFFLEEDGEIISHQYRMQIAQRSMVYLTIKPLNLSQVEGKPSPWLSVDTALYILKENESQANLQLVCFTELRNREVFGWTGELGPGIYWLIPSTTGCRLRKKIKPVTDEAQLVYRDETGELFLTKEFKSTLSDIFEVIDLDGNGLLSLEEYNFFELRTSGEKCDEDAWAVCRENFDTKRNELTRQGFMDLNLMEANDREGDPCDLWVTLHSMGYNKALELTEACPFVIDIYAEKCKPKIKAVHMEACSGQLEKAICKSVLSNGDAKVMDGYENIIVHTYSCDTWITSVIENKSDEKVIIHISNELSKNCINNRGLNIFAVEVGPKSTMVCQHVMPLNERQEWIYYCIYSLIS", "length": 629 }, "evidence": [ { "id": "F1S812", "url": "https://omabrowser.org/oma/group/F1S812/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8VDY4-1", "protein_name": "EF-hand calcium-binding domain-containing protein 7", "gene_name": "Efcab7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASNPGSDAALGTQNPLLSGSPRTKKFPLTEQEVFYMNCRAAYLTIFKSSLENIISKDQLYLALQHAGRNPSQKTINKYWTPQTAKLNFDDFCIILSKEKPTSKAELLKSFKKLDVNDDGAILHSDLQKYLTKRGEKMTQEEVNAVINLADINANGKFDYVKFCKLYMTTSEQCLKTTLERLEADSKLRRQQFGSHMEGSPERGPSPAPKPSPRVIRKNDQETFSSKGDTSHALLSTTRKFKTSVSFTMTMSANSNQDSTLTEPNLKDWQCAQSKGCFFLEEDGEVVSHQYKMHIAQRSVLYLTIKPLYLSQVEGKRCPWLSVDTALYILKKNENPAEPQLMCFTELRNREVFGWTGELEAGIYWLIPSTTGCRLKKETKPVTEEAQLVHRDETGELSLTSEFRSTLSEIFEVIDLDGNGLISLEEYNFFELRTSGEKCDEDAWAVCRENFDTKKNELTRQGFMDLHLMEANDREGDPLDLWVTLHSMGYNKALELTEACPFVINIYAERCKPRIKVVHMEACSGQLEKAICKSVLDRSDAKVMDGYENIIVHTCNYDTWITSIIENKSDNKVIIHINNELSKNCVNNRGLNIFAVEVAPRSTMVCQHVMPLNEQEEWIYCCVYSLVA", "length": 628 }, "evidence": [ { "id": "F1S812", "url": "https://omabrowser.org/oma/group/F1S812/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "magnesium ion binding", "id": "GO:0000287", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000287", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "phosphoglucomutase activity", "id": "GO:0004614", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004614", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "ciliary membrane", "id": "GO:0060170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060170", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "plasma membrane protein complex", "id": "GO:0098797", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098797", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "cytoplasmic side of plasma membrane", "id": "GO:0009898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009898", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "positive regulation of protein localization to ciliary membrane", "id": "GO:1903569", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903569", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "positive regulation of protein import into nucleus", "id": "GO:0042307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042307", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "regulation of smoothened signaling pathway", "id": "GO:0008589", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008589", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "protein localization to motile cilium", "id": "GO:0120229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120229", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "carbohydrate metabolic process", "id": "GO:0005975", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005975", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" }, { "name": "glucose metabolic process", "id": "GO:0006006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006006", "evidence": [ { "database": "UniProtKB", "id": "F1S812", "url": "https://www.uniprot.org/uniprotkb/F1S812" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 310, "end_pos": 312, "annotation": "n_glycosylation_sequon" }, { "start_pos": 568, "end_pos": 570, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "23536", "name": "", "equation": "alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "23536", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/23536" } ] }, { "id": "68748", "name": "", "equation": "O-phospho-L-seryl-[protein] + alpha-D-glucose 1-phosphate = alpha-D-glucose 1,6-bisphosphate + L-seryl-[protein]", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "68748", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/68748" } ] }, { "id": "68752", "name": "", "equation": "alpha-D-glucose 1,6-bisphosphate + L-seryl-[protein] = O-phospho-L-seryl-[protein] + alpha-D-glucose 6-phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "68752", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/68752" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S812-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 629, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S812-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S812" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S812", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S812" }, { "id": "PS50222", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50222" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EF-hand", "eco_id": "ECO_0000259", "start_pos": 102, "end_pos": 137, "start_aa": "Thr", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA 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"publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S823", "url": "https://www.uniprot.org/uniprotkb/F1S823" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S841-1", "uniprot_ac": "F1S841", "uniprot_id": "F1S841_PIG", "mass": { "chemical_mass": 35897.0, "monoisotopic_mass": 35897.0 }, "refseq": {}, "gene_names": [ { "name": "CALHM2", "type": "recommended", "evidence": [ { "id": "F1S841", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S841" } ] } ], "protein_names": [ { "name": "Calcium homeostasis modulator family member 2", "type": "synonym", "evidence": [ { "id": "F1S841", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S841/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": 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"MAALIAENFRFLSLFFKSKDVMIFNGLVALGTVGSQELFTVVAFHCPCSPARNYLYGLTAIGVPALALFLIGVILNNHTWNLVAECQYRRTKNCSAAPNFLLLSSIVGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAGKESFPLAHATEILARFPCGEGPANLSGFREEVSRRLKYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRTNEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDDEELVAKFPVEGTQPRPQWNAITGVYLYRENQGLPLYSRLHKWAQGLAGNGTAPDNIEMALLTS", "length": 323, "header": "tr|F1S841-1|F1S841_PIG Isoform 1 of Calcium homeostasis modulator family member 2 OS=Sus scrofa OX=9823 GN=CALHM2 PE=3 SV=3 CANONICAL=F1S841-1" }, "isoforms": [ { "isoform_ac": "F1S841-1", "url": "https://www.uniprot.org/uniprotkb/F1S841/entry#F1S841-1", "sequence": { "sequence": "MAALIAENFRFLSLFFKSKDVMIFNGLVALGTVGSQELFTVVAFHCPCSPARNYLYGLTAIGVPALALFLIGVILNNHTWNLVAECQYRRTKNCSAAPNFLLLSSIVGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAGKESFPLAHATEILARFPCGEGPANLSGFREEVSRRLKYESQLFGWLLIGVVAILVFLTKCLKHYCSPLSYRQEAYWAQYRTNEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDDEELVAKFPVEGTQPRPQWNAITGVYLYRENQGLPLYSRLHKWAQGLAGNGTAPDNIEMALLTS", "length": 323, "header": "tr|F1S841-1|F1S841_PIG Isoform 1 of Calcium homeostasis modulator family member 2 OS=Sus scrofa OX=9823 GN=CALHM2 PE=3 SV=3 CANONICAL=F1S841-1" }, "locus": { "chromosome": "14", "start_pos": 114383233, "end_pos": 114381030, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062906.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062906.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049975.1", "url": "https://www.ensembl.org/id/ENSSSCP00000049975.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S841", "url": "https://www.uniprot.org/uniprotkb/F1S841" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E1C257-1", "protein_name": "Calcium homeostasis modulator family member 2", "gene_name": "CALHM2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"MAALIAENFRFLSLFFKSKDVMIFNGLVALGTVGSQELFSVVAFHCPCSPARNYLYGLTAIGVPALALFLIGVILNNHTWNLVAECQYRRAKNCSAAPTFLLLSSILGRAAVAPVTWSVISLLRGEAYVCALSEFVDPSSLTAGDEGFPPDHATEILARFPCGEGPANLSGFREEVSRRLKYESQLFGWLLIGVVAILVFLTKCFKHYCSPLSYRQEAYWAQYRTNEDQLFQRTAEVHSRVLAANNVRRFFGFVALNKDDEELVTKFPVEGTQPRPQWNAITGVYLYRENQGLPLYSRLHKWAQGLTGNGTAPDNVEMALLTV", "length": 323 }, "evidence": [ { "id": "F1S841", "url": "https://omabrowser.org/oma/group/F1S841/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8VEC4-1", "protein_name": "Calcium homeostasis modulator protein 2", "gene_name": "Calhm2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"https://www.ebi.ac.uk/QuickGO/term/GO:1904669", "evidence": [ { "database": "UniProtKB", "id": "F1S841", "url": "https://www.uniprot.org/uniprotkb/F1S841" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "monoatomic cation channel activity", "id": "GO:0005261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005261", "evidence": [ { "database": "UniProtKB", "id": "F1S841", "url": "https://www.uniprot.org/uniprotkb/F1S841" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 309, "end_pos": 311, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" }, { "start_pos": 93, "end_pos": 95, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S873-1", "uniprot_ac": "F1S873", "uniprot_id": "F1S873_PIG", "mass": { "chemical_mass": 13746.0, "monoisotopic_mass": 13746.0 }, "refseq": {}, "gene_names": [ { "name": "C17H20orf202", "type": "recommended", "evidence": [ { "id": "F1S873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S873" } ] }, { "name": "C20orf202", "type": "synonym", "evidence": [ { "id": "F1S873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S873" } ] } ], "protein_names": [ { "name": "Chromosome 17 C20orf202 homolog", "type": "synonym", "evidence": [ { "id": "F1S873", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S873/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S873", "url": "https://www.uniprot.org/uniprotkb/F1S873" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C17H20orf202", "url": "https://www.uniprot.org/uniprotkb/F1S873", "locus": {} } ], "crossref": [ { "id": "F1S873", "url": "https://alphafold.ebi.ac.uk/entry/F1S873", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007192", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007192", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR051771", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051771", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "RAESAHW", "url": "https://omabrowser.org/oma/group/RAESAHW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR32289", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32289", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32289:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32289:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "F1S873", "url": "https://www.uniprot.org/uniprotkb/F1S873", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S873-1", "url": "https://www.uniprot.org/uniprotkb/F1S873-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFKSQVPRAHHQVSVKVSPKDTEMKTAEEPTSSLGQILEWLRKELAEMQVQDQRLLLTLRHLHSILEELRAESAHWEDARSSGGTSPIRARADSEGRGRQPFSSRGLAHLLQGVDSRRSSLP", "length": 122, "header": "tr|F1S873-1|F1S873_PIG Isoform 1 of Chromosome 17 C20orf202 homolog OS=Sus scrofa OX=9823 GN=C17H20orf202 PE=4 SV=2 CANONICAL=F1S873-1" }, "isoforms": [ { "isoform_ac": "F1S873-1", "url": "https://www.uniprot.org/uniprotkb/F1S873/entry#F1S873-1", "sequence": { "sequence": "MFKSQVPRAHHQVSVKVSPKDTEMKTAEEPTSSLGQILEWLRKELAEMQVQDQRLLLTLRHLHSILEELRAESAHWEDARSSGGTSPIRARADSEGRGRQPFSSRGLAHLLQGVDSRRSSLP", "length": 122, "header": "tr|F1S873-1|F1S873_PIG Isoform 1 of Chromosome 17 C20orf202 homolog OS=Sus scrofa OX=9823 GN=C17H20orf202 PE=4 SV=2 CANONICAL=F1S873-1" }, "locus": { "chromosome": "17", "start_pos": 34085955, "end_pos": 34083709, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007871.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007871.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007660.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007660.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S873", "url": "https://www.uniprot.org/uniprotkb/F1S873" } ], "reference": [ { "type": "PubMed", "id": 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"categories": [ "Protein Classification" ] }, { "id": "ssc:100626120", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626120", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1S881", "url": "https://www.orthodb.org/?gene=F1S881", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19971", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19971", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07654", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07654", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020933187", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933187", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S881", "url": "https://www.uniprot.org/uniprotkb/F1S881", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S881-1", "url": "https://www.uniprot.org/uniprotkb/F1S881-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDYVSGPGTYVSVNGTTNEMLKVQQAELSQTVSPGETLTLSCSVPDSFPKGPVLWFKGTGPNRQLIYSFRGGLFPRVKKTGNTTKAGNTDFSIRISEISLADAGTYFCVKFKEGKPDIEYQSGQGTQVTVIAPPSLPVIIGPLEKALIGQAVNFSCISYGFFPENITLKWFKNGKEISSLQTHVVKLKESNVYKISSTTEVVLSLQDFYAYITCDVNHLSLHYPLQGTADLSKTMLVPPTMSIFEHPVSKNKINVTCKAKKFYPKGIWLTWLKNGNVSRIDKTLTPTKRRDGLYTVQSSILVNKPHEIEDTVLTCQAEQDGQQEVTSKMTFLVSAHLDKHKK", "length": 342, "header": "tr|F1S881-1|F1S881_PIG Isoform 1 of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100626120 PE=4 SV=4 CANONICAL=F1S881-1" }, "isoforms": [ { "isoform_ac": "F1S881-1", "url": "https://www.uniprot.org/uniprotkb/F1S881/entry#F1S881-1", "sequence": { "sequence": "MDYVSGPGTYVSVNGTTNEMLKVQQAELSQTVSPGETLTLSCSVPDSFPKGPVLWFKGTGPNRQLIYSFRGGLFPRVKKTGNTTKAGNTDFSIRISEISLADAGTYFCVKFKEGKPDIEYQSGQGTQVTVIAPPSLPVIIGPLEKALIGQAVNFSCISYGFFPENITLKWFKNGKEISSLQTHVVKLKESNVYKISSTTEVVLSLQDFYAYITCDVNHLSLHYPLQGTADLSKTMLVPPTMSIFEHPVSKNKINVTCKAKKFYPKGIWLTWLKNGNVSRIDKTLTPTKRRDGLYTVQSSILVNKPHEIEDTVLTCQAEQDGQQEVTSKMTFLVSAHLDKHKK", "length": 342, "header": "tr|F1S881-1|F1S881_PIG Isoform 1 of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100626120 PE=4 SV=4 CANONICAL=F1S881-1" }, "locus": { "chromosome": "17", "start_pos": 33813555, "end_pos": 33796064, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007862.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007862.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007651.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007651.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S881", "url": "https://www.uniprot.org/uniprotkb/F1S881" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100626120", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100626120", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1S881", "url": "https://www.uniprot.org/uniprotkb/F1S881" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 14, "end_pos": 16, "annotation": "n_glycosylation_sequon" }, { "start_pos": 153, "end_pos": 155, "annotation": "n_glycosylation_sequon" }, { "start_pos": 165, "end_pos": 167, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 276, "end_pos": 278, "annotation": "n_glycosylation_sequon" }, { "start_pos": 82, "end_pos": 84, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S881-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 342, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S881-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S881" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S881", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S881" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 108, "start_aa": "Pro", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { 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Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014756", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014756", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018350", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018350", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032200", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032200", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032201", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032201", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038006", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038006", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038173", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038173", "database": 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"database": "Ensembl Peptide", "id": "ENSSSCP00000014309.1", "url": "https://www.ensembl.org/id/ENSSSCP00000014309.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 381, "start_aa": "Thr", "end_pos": 381, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr381", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 438, "start_aa": "Thr", "end_pos": 438, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr438", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 443, "start_aa": "Thr", "end_pos": 443, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr443", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 450, "start_aa": "Thr", "end_pos": 450, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr450", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S8I1", "url": "https://www.uniprot.org/uniprotkb/F1S8I1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515299", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515299", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1L1RQ93-1", "protein_name": "Leucine rich repeat and Ig domain containing 3", "gene_name": "LINGO3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLYTMTCWLPVLVLHLVLLSPLQVAACPARCECAPQIKSVVCHRKRLTAIPEGIPTETKILELNKNRIRCLNPGDLSPYPLLEELDFSENIITNVEPGAFSNLFNLQTLRLRGNQLKLIPPGVFTKLTNLTLLDISENKLVILLDYMFQDLRNLKSLEVGDNDLVYISQRAFSGLLGLEQLTIEKCNLTSISAESLSYLQNLEVLRLRHLSISALEEQNFKKLYNLLQLEIDNWPLLEDISPTSFQGLNLTSLSITYTNITAVPTAALRNLVYLRYLNLSYNPISTVLKGSFKDLIRLQELHIVGALLVSVEPQAFSGLRQIRLLNLSSNFLSTLEESTFHSVNTLETLRVDRNPLACDCRLLWILQRRKTLNFDGQQPMCSTPPEIQGNALRDFPDSVLFEYFTCQKPKIRDRKLQHVTAREGQSVSFLCRADGEPEPSIVWVSPQHRMITTRSTGRATVLPGGTLEIRFAQVQDSGTYICIASNAGGNDTYFATLTVKGHPNDGSSNANRTLYLNEFNDTYHNDTQVFLKFTLDLKTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPTTTTGQGGARKFNMKMI", "length": 605 }, "evidence": [ { "id": "F1S8I1", "url": "https://omabrowser.org/oma/group/F1S8I1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0M4X1-1", "protein_name": "Leucine rich repeat and Ig domain containing 3", "gene_name": "Lingo3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTCWLHMLGLHLLLLPTAPLATGCPARCECSASTRTVACGRRRLTAVPEGIPAETRMLELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLLHLEIDNWPLLEEVAPGSLRGLNLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLPACATPAEVRGDALHNLPDSVLFEYFVCRKPKIRERRLQHVTATEGDDVRFLCRAEGEPAPTVAWVTPQHHSVTAASRGRARVLPGGTLAITDTRPQDSGTYTCVASNAGGNDTYFATLTIHPAANRTQSDGHNETQVGVRFPLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI", "length": 589 }, "evidence": [ { "id": "F1S8I1", "url": "https://omabrowser.org/oma/group/F1S8I1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N3H2-1", "protein_name": "Leucine rich repeat and Ig domain containing 3", "gene_name": "LINGO3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCWLWVLSLQFLLLPAALPPAGGCPARCECTAQTRAVACPRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPLLEELDLSENVIAHVEPGAFANLPRLRVLRLRGNLLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLRSLRRLEVGDNDLVFISRRAFAGLLALEELTLERCNLTALSGESLGHLRGLGALRLRHLAIAALEDQNFQRLPGLLHLEIDNWPLLEEVAAGSLRGLNLTSLSVTHTNITAVPSAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLLWVVQRRKTLNFDGRPPACATPAEVRGDALRSLPDSALFEYFVCRKPKIRERRLQRITAAAGADVRFQCRAEGEPAPTVAWVTPRHRTVTAASAGRARVLPGGTLHIQDARPGDSGTYTCVASNAGGNDTYFATLSVQPEPAVNRTPGEGRNDTQVAARFPLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI", "length": 592 }, "evidence": [ { "id": "F1S8I1", "url": "https://omabrowser.org/oma/group/F1S8I1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C6S8-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3", "gene_name": "LINGO3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTCWLCVLSLPLLLLPAAPPPAGGCPARCECTVQTRAVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQRVTATAGEDVRFLCRAEGEPAPTVAWVTPQHRPVTATSAGRARVLPGGTLEIQDARPQDSGTYTCVASNAGGNDTYFATLTVRPEPAANRTPGEAHNETLAALRAPLDLTTILVSTAMGCITFLGVVLFCFVLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI", "length": 592 }, "evidence": [ { "id": "F1S8I1", "url": "https://omabrowser.org/oma/group/F1S8I1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6GQU6-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3", "gene_name": "Lingo3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTCWLHMLGLHLLLLPTAPLAAGCPARCECSASTRTVACGRRRLTAIPEGIPAETRMLELSRNRIRCLNPGDLASLPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLTLLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSLSPESLGHLRGLGALRLRHLAIAALEDQNFQKLPGLSHLEIDNWPLLEEVAPGSLRGLNLTSLSITHTNITAVPAAALRQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLSDNLLSTLEENTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLPACATPAEVRGDALHNLPDSVLFEYFVCRKPKIRERRLQHVTATEGDDVRFLCRAEGEPAPTVAWVTPQHHSVTAASRGRARVLPGGTLTIADTRPQDSGTYTCVASNAGGNDTYFATLTVQPAANRTQGDGHNETQVGVRFPLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI", "length": 589 }, "evidence": [ { "id": "F1S8I1", "url": "https://omabrowser.org/oma/group/F1S8I1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1S8I1", "url": "https://www.uniprot.org/uniprotkb/F1S8I1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "signaling receptor activity", "id": "GO:0038023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038023", "evidence": [ { "database": "UniProtKB", "id": "F1S8I1", "url": "https://www.uniprot.org/uniprotkb/F1S8I1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 127, "end_pos": 129, "annotation": "n_glycosylation_sequon" }, { "start_pos": 185, "end_pos": 187, "annotation": "n_glycosylation_sequon" }, { "start_pos": 247, "end_pos": 249, "annotation": "n_glycosylation_sequon" }, { "start_pos": 257, "end_pos": 259, "annotation": "n_glycosylation_sequon" }, { "start_pos": 276, "end_pos": 278, "annotation": "n_glycosylation_sequon" }, { "start_pos": 324, "end_pos": 326, "annotation": "n_glycosylation_sequon" }, { "start_pos": 488, "end_pos": 490, "annotation": "n_glycosylation_sequon" }, { "start_pos": 504, "end_pos": 506, "annotation": "n_glycosylation_sequon" }, { "start_pos": 512, "end_pos": 514, "annotation": "n_glycosylation_sequon" }, { "start_pos": 562, "end_pos": 564, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S8I1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 592, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S8I1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S8I1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S8I1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8I1" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 407, "end_pos": 496, "start_aa": "Pro", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 381, 438, 443, 450 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 127, "end_pos": 129 }, { "start_pos": 185, "end_pos": 187 }, { "start_pos": 247, "end_pos": 249 }, { "start_pos": 257, "end_pos": 259 }, { "start_pos": 276, "end_pos": 278 }, { "start_pos": 324, "end_pos": 326 }, { "start_pos": 488, "end_pos": 490 }, { "start_pos": 504, "end_pos": 506 }, { "start_pos": 512, "end_pos": 514 }, { "start_pos": 562, "end_pos": 564 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 4 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 4 }, { "field": "exact_o_linked_sites", "count": 4 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 4 }, { "field": "total_sites", "count": 4 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 4 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 4 }, { "field": "exact_o_linked_sites", "count": 4 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S8I4-1", "uniprot_ac": "F1S8I4", "uniprot_id": "F1S8I4_PIG", "mass": { "chemical_mass": 25523.0, "monoisotopic_mass": 25523.0 }, "refseq": { "ac": "XP_020939860", "name": "MOB kinase activator 3A", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939860" }, "gene_names": [ { "name": "MOB3A", "type": "recommended", "evidence": [ { "id": "F1S8I4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8I4" } ] }, { "name": "MOB3A", "type": "synonym", "evidence": [ { "id": "XP_020939860", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939860" } ] } ], "protein_names": [ { "name": "MOB kinase activator 3A", "type": "synonym", "evidence": [ { "id": "XP_020939860", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939860" }, { "id": "F1S8I4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8I4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S8I4", "url": "https://www.uniprot.org/uniprotkb/F1S8I4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MOB3A", "url": "https://www.uniprot.org/uniprotkb/F1S8I4", "locus": { "chromosome": "2", "start_pos": 76496060, "end_pos": 76475530, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000032366", "url": "https://www.ensembl.org/id/ENSSSCG00000032366" } ] } } ], "crossref": [ { "id": "ENSSSCG00000032366", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000032366", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "110259373", "url": "https://www.ncbi.nlm.nih.gov/gene/110259373", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005301", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005301", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036703", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036703", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110259373", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259373", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HMGSEAH", "url": "https://omabrowser.org/oma/group/HMGSEAH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S8I4", "url": "https://www.orthodb.org/?gene=F1S8I4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22599", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22599", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03637", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03637", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939860", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939860", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S8I4", "url": "https://www.uniprot.org/uniprotkb/F1S8I4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S8I4-1", "url": "https://www.uniprot.org/uniprotkb/F1S8I4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSNPFLLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLKLAVQLPAGEELNDWVAVHVVDFFNRINLIYGTISDGCTERSCPIMSGGPKYEYRWQDENKFRRPTALSAPRYMDLLMDWVEVQINNEDVFPTNVGTPFPKNFLQVVKKILSRLFRVFVHVYIHHFDRIAQLGSEAHVNTCYKHFYYFVTEFGLIDTKELEPLKEMTARMCH", "length": 218, "header": "tr|F1S8I4-1|F1S8I4_PIG Isoform 1 of MOB kinase activator 3A OS=Sus scrofa OX=9823 GN=MOB3A PE=4 SV=3 CANONICAL=F1S8I4-1" }, "isoforms": [ { "isoform_ac": "F1S8I4-1", "url": "https://www.uniprot.org/uniprotkb/F1S8I4/entry#F1S8I4-1", "sequence": { "sequence": "MSNPFLLKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLKLAVQLPAGEELNDWVAVHVVDFFNRINLIYGTISDGCTERSCPIMSGGPKYEYRWQDENKFRRPTALSAPRYMDLLMDWVEVQINNEDVFPTNVGTPFPKNFLQVVKKILSRLFRVFVHVYIHHFDRIAQLGSEAHVNTCYKHFYYFVTEFGLIDTKELEPLKEMTARMCH", "length": 218, "header": "tr|F1S8I4-1|F1S8I4_PIG Isoform 1 of MOB kinase activator 3A OS=Sus scrofa OX=9823 GN=MOB3A PE=4 SV=3 CANONICAL=F1S8I4-1" }, "locus": { "chromosome": "2", "start_pos": 76493912, "end_pos": 76486983, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049830.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049830.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032591.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032591.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S8I4", "url": "https://www.uniprot.org/uniprotkb/F1S8I4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:110259373", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110259373", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5PZY9-1", "protein_name": "MOB kinase activator 3A", "gene_name": "MOB3A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSHALKQVFNKDKTFRPKRKFEPGTQRFELHKKAQASLNAGLDLKVAVQLPPGEEQNDWVAVHVVDFFNRINLIYGTISDYCTEQSCPVMSGGPRYEYRWQDEHKYRKPTALSAPQYMNLLMDWIEVQINNEDIFPTNVGTPFPRNFLPVVKKILSRLFRVFVHVYIHHFDRITQMGSEAHVNTCYKHFYYFVKEFNLIDTKELEPLKEMTAQMCH", "length": 216 }, "evidence": [ { "id": "F1S8I4", "url": "https://omabrowser.org/oma/group/F1S8I4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B5DEX8-1", 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76402971, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014697.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014697.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014301.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014301.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S8I9", "url": "https://www.uniprot.org/uniprotkb/F1S8I9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514627", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514627", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q3ZCI3-1", "protein_name": "Pleckstrin homology domain-containing family J member 1", "gene_name": "PLEKHJ1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRYNDKELQALSRQPAEMAAELGMRGPKKGSVVKRRLVKLVVNFLFYFRTDEAEPIGALLLEHCRVIHEEPNSFSISFLEDPERKYHFECCSEEQCQQWMAALRQASYEFMRRSLIFYRNEIQKMTGKDPLEQYGISEEARFQLSGLKA", "length": 149 }, "evidence": [ { "id": "F1S8I9", "url": "https://omabrowser.org/oma/group/F1S8I9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5ZLT5-1", "protein_name": "Pleckstrin homology domain-containing family J member 1", "gene_name": "PLEKHJ1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRYNERELLSLSRQPAEKAAEILMRVPKKGSVLKKRLVKLVVNFLFYFRTDEAEPIGALLLEHCRITKEEENVFSISFIEEPERKYCFECDSEEQCQEWIEALKRASYEFMRRSLIFYRNEIQKMTGKDPLEQFGISEEARFQLASHKQ", "length": 149 }, "evidence": [ { "id": "F1S8I9", "url": "https://omabrowser.org/oma/group/F1S8I9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9D240-1", "protein_name": "Pleckstrin homology domain-containing family J member 1", "gene_name": "Plekhj1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRYNEKELQALSRQPAEMAAELGMRGPKKGSVAKRRLVKLVVNFLFYFRPDEAEPLGALLLERCRVAQEEPGGFSISFVEDLSRKYHFECCSQEQCQDWMEALQRASYEYMRQSLIFYRNEIRKMTGKDPLEQFGISEEARFQLNSLPKDGRTTCIGSQLNVLD", "length": 164 }, "evidence": [ { "id": "F1S8I9", "url": "https://omabrowser.org/oma/group/F1S8I9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NW61-1", "protein_name": "Pleckstrin homology domain-containing family J member 1", "gene_name": "PLEKHJ1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRYNEKELQALSRQPAEMAAELGMRGPKKGSVLKRRLVKLVVNFLFYFRTDEAEPVGALLLERCRVVREEPGTFSISFIEDPERKYHFECSSEEQCQEWMEALRRASYEFMRRSLIFYRNEIRKVTGKDPLEQFGISEEARFQLSGLQA", "length": 149 }, "evidence": [ { "id": "F1S8I9", "url": "https://omabrowser.org/oma/group/F1S8I9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "F1S8I9", "url": "https://www.uniprot.org/uniprotkb/F1S8I9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": 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"https://www.uniprot.org/uniprotkb/F1S8J6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S8J6-1", "url": "https://www.uniprot.org/uniprotkb/F1S8J6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKIGPQQCISTSVGPSASQRSTRDMGSDSGCC", "length": 216, "header": "tr|F1S8J6-1|F1S8J6_PIG Isoform 1 of RAB2B, member RAS onco family OS=Sus scrofa OX=9823 GN=RAB2B PE=1 SV=1 CANONICAL=F1S8J6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UZR8-1", "url": "https://www.uniprot.org/uniprotkb/F1S8J6/entry#A0A4X1UZR8-1", "sequence": { "sequence": "MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEANGIKIGPQQCISTSVGPSASQRSTRDMGSDSGCC", "length": 193, "header": 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OS=Sus scrofa OX=9823 GN=RAB2B PE=1 SV=1 CANONICAL=F1S8J6-1" }, "locus": { "chromosome": "7", "start_pos": 77713864, "end_pos": 77699240, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086920.1", "url": "https://www.ensembl.org/id/ENSSSCT00000086920.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060638.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060638.1" } ] } }, { "isoform_ac": "A0A8D1CLT2-1", "url": "https://www.uniprot.org/uniprotkb/F1S8J6/entry#A0A8D1CLT2-1", "sequence": { "sequence": "MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKRPSLTQPKKYIGRSSRVYLMFTMRQMASRLAPSSVFQHQWDPVPPSGALVTWDLTLAAAEHLAWTFFSFLEQLQINRLKERGLTCFG", "length": 207, "header": "tr|A0A8D1CLT2-1|A0A8D1CLT2_PIG Computationally mapped isoform of RAB2B, member RAS onco family OS=Sus scrofa OX=9823 GN=RAB2B PE=1 SV=1 CANONICAL=F1S8J6-1" }, "locus": { "chromosome": "7", "start_pos": 77715346, 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR001736", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032803", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032803", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050874", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050874", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ETRYWPY", "url": "https://omabrowser.org/oma/group/ETRYWPY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10185", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10185", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10185:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10185:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13918", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13918", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020920113", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920113", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S8N8", "url": "https://www.uniprot.org/uniprotkb/F1S8N8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S8N8-1", "url": "https://www.uniprot.org/uniprotkb/F1S8N8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6B1", "url": "https://www.uniprot.org/uniprotkb/I3L6B1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6B1-1", "url": "https://www.uniprot.org/uniprotkb/I3L6B1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEIRQHEWLSASPHDGFEQMRLKSRPKEPSPSLTRVGANFYSSVKQQDYSASVWLRRKDKLEHSQQKCIVVFALVCCFAILVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSENAPFHLSLFQGWMNLLNMAKKSVDIVSSHWDLNHSHPSACQGQRLFEKLLQLTSESVEIKLVSDVTADSKVLEALKSKGAEVTYMNMTAYNKGRLQSSFWIVDKQHVYIGSAGLDWQSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVTDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERENACVTTKEQKNHTFPKLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRNNTSIIKQLKDVFERDWYSPYARTLQPTKQPNCSGLFKLRPPSNKTATYNASGKDPSSVSSE", "length": 540, "header": "tr|F1S8N8-1|F1S8N8_PIG Isoform 1 of Phospholipase D family member 5 OS=Sus scrofa OX=9823 GN=PLD5 PE=3 SV=3 CANONICAL=F1S8N8-1" }, "isoforms": [ { "isoform_ac": "F1S8N8-1", "url": "https://www.uniprot.org/uniprotkb/F1S8N8/entry#F1S8N8-1", "sequence": { "sequence": "MEIRQHEWLSASPHDGFEQMRLKSRPKEPSPSLTRVGANFYSSVKQQDYSASVWLRRKDKLEHSQQKCIVVFALVCCFAILVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSENAPFHLSLFQGWMNLLNMAKKSVDIVSSHWDLNHSHPSACQGQRLFEKLLQLTSESVEIKLVSDVTADSKVLEALKSKGAEVTYMNMTAYNKGRLQSSFWIVDKQHVYIGSAGLDWQSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVTDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERENACVTTKEQKNHTFPKLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRNNTSIIKQLKDVFERDWYSPYARTLQPTKQPNCSGLFKLRPPSNKTATYNASGKDPSSVSSE", "length": 540, "header": "tr|F1S8N8-1|F1S8N8_PIG Isoform 1 of Phospholipase D family member 5 OS=Sus scrofa OX=9823 GN=PLD5 PE=3 SV=3 CANONICAL=F1S8N8-1" }, "locus": { "chromosome": "10", "start_pos": 15723200, "end_pos": 15423684, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011891.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011891.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011587.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011587.3" } ] } }, { "isoform_ac": "I3L6B1-1", "url": "https://www.uniprot.org/uniprotkb/F1S8N8/entry#I3L6B1-1", "sequence": { "sequence": "MLTAGPVCLRAHSRGNSDIASRRPFSLRWVWLISRASRPAIEGLKSHRWQYIRTPRALRSLQRLQGPWTQHASPSSWLPNSGGREDWIAMSQQKCIVVFALVCCFAILVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSENAPFHLSLFQGWMNLLNMAKKSVDIVSSHWDLNHSHPSACQGQRLFEKLLQLTSESVEIKLVSDVTADSKVLEALKSKGAEVTYMNMTAYNKGRLQSSFWIVDKQHVYIGSAGLDWQSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVTDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERENACVTTKEQKNHTFPKLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRNNTSIIKQLKDVFERDWYSPYARTLQPTKQPNCSGLFKLRPPSNKTATYNASGKDPSSVSSE", "length": 567, "header": "tr|I3L6B1-1|I3L6B1_PIG Computationally mapped isoform of Phospholipase D family member 5 OS=Sus scrofa OX=9823 GN=PLD5 PE=3 SV=4 CANONICAL=F1S8N8-1" }, "locus": { "chromosome": "10", "start_pos": 15654950, "end_pos": 15423684, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027974.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027974.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019562.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019562.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S8N8", "url": "https://www.uniprot.org/uniprotkb/F1S8N8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E1BJN9-1", "protein_name": "Phospholipase D family member 5", "gene_name": "PLD5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEIRQHEWLSASPHEGFEQMRLKSRPKEPSPSLTRVGANFYSSVKQQDYSASVWLRRKDKLEHSQQKCIVIFALVCCFAILVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSENAPFHLSLFQGWMNLLSMAKKSVDIVSSHWDLNHSHPSACQGQRLFEKLLQLTSQSIEIKLVSDVTADSKVLEALKSKGAEVTYMNMTAYNKGRLQSSFWIVDKQHVYIGSAGLDWRSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVMDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERENACIRKEQRNHTFPRLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRNNTSIIKQLKDVFERDWYSPYARTLQPTKQPNCSSLFRLRLPSNKTAMYNASGKDP", "length": 533 }, "evidence": [ { "id": "F1S8N8", "url": "https://omabrowser.org/oma/group/F1S8N8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1C1H9-1", "protein_name": "Phospholipase D family member 5", "gene_name": "PLD5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEVRHDWLSSSPHEGFEQMRLKSRPREPSPSLTRVGANFYSTVKQQDYSASVWLRRKDKLEHSQQRCIVIFALVCCFAILVALIFSAVDIMGEDEDGLSEKNCQNNCRVALVENIPEGINYSDSAPSHLSLFQGWMNLLNMAEKSVDIVSSQWDLNHSHPSACQGQRLFEKLLELASRNIEIKLVSDILPVESKVLNDLKSKGAEVLYMNMSAYNEGRLQSSFWIVDKQHVYIGSASLDWRSLGQMKELGVIVYNCSCLVLDLQRIFALYSSLKYKNKIPPSWSKRLYGVYDTQNKLTLQLNETKSEAFVSNSPKLFCPKDRVLDIEAIYNVIDDAKQFVYIAVMDYLPIVIDTNAKRYWPFLDGKIREALVLRSIKVRLLISFSRDTDPLTFNFVSSLKAICTEVPSCSLKVKFFDLEEESACFLKDQKNASLPKLNRNKYMVTDGAAYIGNFDWVGNAFTQNAGAGLVINQADAGNSTSIIKQLKAVFERDWYSHYAKSLQPTKMPNCFNHKLSKATSNKTAMSNVN", "length": 529 }, "evidence": [ { "id": "F1S8N8", "url": "https://omabrowser.org/oma/group/F1S8N8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MA92-1", "protein_name": "Phospholipase D family, member 5", "gene_name": "Pld5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEIRQHEWLSASPHEGFEQMRLKSRPKEPSPSLTRVGANFYSSVKQQDYSASVWLRRKDKLEHSQQKCIVIFALVCCFAVLVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSEDAPFHLPLFQGWMNLLNMAKKSVDIVSSHWDLNHTHPSACQGQRLFEKLLQLTSQNIEVKLVSDVTADSKVLEALKLKGAEVTYMNMTAYNKGRLQSSFWIVDKQHVYIGSAGLDWRSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVTDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERENACATKEQKNQTFPKLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRDNRSIIKQLKDVFERDWYSPYAKSIQPTKQPNCSNLSKLKTPSNQPAIYNTTGREPLSV", "length": 536 }, "evidence": [ { "id": "F1S8N8", "url": "https://omabrowser.org/oma/group/F1S8N8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3UNN8-1", "protein_name": "Inactive phospholipase D5", "gene_name": "Pld5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIRQHEWLSASPHEGFEQMRLKSRPKEPSPSLTRVGANFYSSVKQQDYSASVWLRRKDKLEHSQQKCIVIFALVCCFAVLVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSEDAPFHLPLFQGWMNLLNMAKKSVDIVSSHWDLNHTHPAACQGQRLFEKLLQLTSQNIEVKLVSDVTADSKVLEALKLKGAEVTYMNMTAYNKGRLQSSFWIVDKQHVYIGSAGLDWRSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVTDYLPISSTSSKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERENACATKEQKNQTFPKLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRDNRSIIKQLKDVFERDWYSPYAKSIQPTKQPNCSSLSKLKSPSKQPAMANATGREPLSV", "length": 536 }, "evidence": [ { "id": "F1S8N8", "url": "https://omabrowser.org/oma/group/F1S8N8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N7P1-1", "protein_name": "Inactive phospholipase D5", "gene_name": "PLD5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEIRQHEWLSASPHEGFEQMRLKSRPKEPSPSLTRVGANFYSSVKQQDYSASVWLRRKDKLEHSQQKCIVIFALVCCFAILVALIFSAVDIMGEDEDGLSEKNCQNKCRIALVENIPEGLNYSENAPFHLSLFQGWMNLLNMAKKSVDIVSSHWDLNHTHPSACQGQRLFEKLLQLTSQNIEIKLVSDVTADSKVLEALKLKGAEVTYMNMTAYNKGRLQSSFWIVDKQHVYIGSAGLDWQSLGQMKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFDIDAIYSVIDDAKQYVYIAVMDYLPISSTSTKRTYWPDLDAKIREALVLRSVRVRLLLSFWKETDPLTFNFISSLKAICTEIANCSLKVKFFDLERENACATKEQKNHTFPRLNRNKYMVTDGAAYIGNFDWVGNDFTQNAGTGLVINQADVRNNRSIIKQLKDVFERDWYSPYAKTLQPTKQPNCSSLFKLKPLSNKTATDDTGGKDPRNV", "length": 536 }, "evidence": [ { "id": "F1S8N8", "url": "https://omabrowser.org/oma/group/F1S8N8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "catalytic activity", "id": "GO:0003824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003824", "evidence": [ { "database": "UniProtKB", "id": "F1S8N8", "url": "https://www.uniprot.org/uniprotkb/F1S8N8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 121, "end_pos": 123, "annotation": "n_glycosylation_sequon" }, { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" }, { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" }, { "start_pos": 302, "end_pos": 304, "annotation": "n_glycosylation_sequon" }, { "start_pos": 321, "end_pos": 323, "annotation": "n_glycosylation_sequon" }, { "start_pos": 408, "end_pos": 410, "annotation": "n_glycosylation_sequon" }, { "start_pos": 432, "end_pos": 434, "annotation": "n_glycosylation_sequon" }, { "start_pos": 479, "end_pos": 481, "annotation": "n_glycosylation_sequon" }, { "start_pos": 480, "end_pos": 482, "annotation": "n_glycosylation_sequon" }, { "start_pos": 510, "end_pos": 512, "annotation": "n_glycosylation_sequon" }, { "start_pos": 522, "end_pos": 524, "annotation": "n_glycosylation_sequon" }, { "start_pos": 528, "end_pos": 530, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S8N8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8N8" }, { "id": "SM00155", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00155" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PLD phosphodiesterase", "eco_id": "ECO_0000259", "start_pos": 215, "end_pos": 242, "start_aa": "Asn", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { 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"start_pos": 1058145, "end_pos": 1056750, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009503.4", "url": "https://www.ensembl.org/id/ENSSSCT00000009503.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009259.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009259.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., 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"length": 1859, "header": "tr|F1S8S9-1|F1S8S9_PIG Isoform 1 of Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 OS=Sus scrofa OX=9823 GN=GBF1 PE=1 SV=6 CANONICAL=F1S8S9-1" }, "locus": { "chromosome": "14", "start_pos": 113378909, "end_pos": 113258026, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011572.6", "url": "https://www.ensembl.org/id/ENSSSCT00000011572.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011270.6", "url": "https://www.ensembl.org/id/ENSSSCP00000011270.6" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1796, "start_aa": "Thr", "end_pos": 1796, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1796", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 933, "start_aa": "Thr", "end_pos": 933, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr933", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 18, "go_terms": [ { "name": "cell activation involved in immune response", "id": "GO:0002263", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002263", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "COPI coating of Golgi vesicle", "id": "GO:0048205", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048205", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "establishment of monopolar cell polarity", "id": "GO:0061162", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061162", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "reactive oxygen species biosynthetic process", "id": "GO:1903409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903409", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "protein localization to endoplasmic reticulum tubular network", "id": "GO:1903420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903420", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": 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"id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "Golgi to endosome transport", "id": "GO:0006895", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006895", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "protein localization to Golgi apparatus", "id": "GO:0034067", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034067", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "cellular response to virus", "id": "GO:0098586", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098586", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "protein localization to endoplasmic reticulum exit site", "id": "GO:0070973", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070973", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "endoplasmic reticulum-Golgi intermediate compartment organization", "id": "GO:0097111", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097111", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "regulation of ARF protein signal transduction", "id": "GO:0032012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032012", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "regulation of protein localization to cell surface", "id": "GO:2000008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000008", "evidence": [ { "database": "UniProtKB", "id": "F1S8S9", "url": "https://www.uniprot.org/uniprotkb/F1S8S9" } ], "pmid": "" }, { "name": "neutrophil chemotaxis", "id": "GO:0030593", "url": 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"MAESGGGGGAGGGGFSAGPGPERPSSMADKNGALKCTFSAPGHSTSLLQGLAALRAQGQLLDVVLTINQETFHAHKVVLAACSDYFRAMFTGGMREASQDVIELKGVSARGLRHIIDFAYSAEVTLDLDCVQDVLGAAVFLQMLPVVELCEEFLKAAMSVETCLNIGHMATTFSLASLKESVDAFTFRHFLQIAEEEDFLHLPLERLVFFLQSNRLQSCAEIDLFRAAVRWLQHDPARRQRASHVLCHIRFPLMRSSDLVDSVQTLDIMVEDVLCRQYLLEAFNYQVLPFRQHEMQSPRTAVRSDVPSLVAFGGTPYTDSDRSVSSKVYQLPEPGARHFRELTEMEVGCSHTCVAVLDNFVYVAGGQHLQYRSGEGAVDACYRYDPHLNRWLRLQAMQESRIQFQLNVLCGMVYATGGRNRAGSLASVERYCPRRNEWGYACSLKRRTWGHAGASAGGRLYISGGYGISVEDKKALHCYDPEADQWEFKAPMSEPRVLHAMVGAGGRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTSVSPMRAGQSEAGCCLLDRKIYIVGGYNWRLNNVTGIVQVYNTETDEWERDLHFPESFAGIACAPVLLPRAGTRR", "length": 613, "header": "tr|F1S905-1|F1S905_PIG Isoform 1 of Kelch like family member 26 OS=Sus scrofa OX=9823 GN=KLHL26 PE=4 SV=3 CANONICAL=F1S905-1" }, "isoforms": [ { "isoform_ac": "F1S905-1", "url": "https://www.uniprot.org/uniprotkb/F1S905/entry#F1S905-1", "sequence": { "sequence": 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{ "database": "Ensembl Peptide", "id": "ENSSSCP00000014793.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014793.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S905", "url": "https://www.uniprot.org/uniprotkb/F1S905" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523486", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523486", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AHZ1-1", "protein_name": "Kelch like family member 26", "gene_name": "KLHL26", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSSGHAEKSVRVWKTGGGLFCTAGCPGLCCGVRCAWSQAAREGVWMSGMGPRLPEGFSMADKNSTLKCTFSAPGHSTTLLQGLASLRAQAQLLDVILTINNEVFQVHKVVLAACSDYFRAMFTGGMREASQDVIELKGVSAKGLKHIIDFAYSAEVTLDLDCIQDVLGAAVFLQMVPVVELCEEFLKSAMSVETCLNIGQMATTFSLASLKESVDAFTFRHFLQISEEEDFLHLPLERLVFFLQSNKLQSCSEIDLFRAAVRWLQYDPTRRASASQVLCHIRFPLMKSSELVDNVQTFDIMVEDVLCRQYLLEAFNYQILPFRQHEMQSPRTTIRSDVLSLITFGGTPYTDNDRTVSCKVYCLPDASGRQFKELTEMEVGSSHSCVAVLDNFVYIVGGQHLQYRSGEGAVDICYRYDPHLNQWLRIQAMQESRIQFQLNVLHGMVYATGGRNRSGSLASVEKYCPKDNEWTYVCSLKRRTWGHAGATVGDKLYISGGYGISVEDKKALHCYDPAVDQWEFKTPMNEPRVLHAMVSANGRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTTVSPMRAGQSEAGCCLLEKKIYIVGGYNWHLNNVTSIVQVYNTETDEWERDLHFPESFAGIACAPVILPQITTPR", "length": 645 }, "evidence": [ { "id": "F1S905", "url": "https://omabrowser.org/oma/group/F1S905/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0LIM8-1", "protein_name": "Kelch-like family member 26", "gene_name": "Klhl26", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F1S905", "url": "https://www.uniprot.org/uniprotkb/F1S905" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "F1S905", "url": "https://www.uniprot.org/uniprotkb/F1S905" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "F1S905", "url": "https://www.uniprot.org/uniprotkb/F1S905" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 571, "end_pos": 573, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": 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"https://www.uniprot.org/uniprotkb/F1S915", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000013902", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013902", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100736865", "url": "https://www.ncbi.nlm.nih.gov/gene/100736865", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "ssc:100736865", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736865", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FCHRDES", "url": "https://omabrowser.org/oma/group/FCHRDES/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S915", "url": "https://www.orthodb.org/?gene=F1S915", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1S915", "url": "https://www.uniprot.org/uniprotkb/F1S915", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S915-1", "url": "https://www.uniprot.org/uniprotkb/F1S915-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGSQLPPLPLLLLVLLLPLIPSDTMASDAANSSSSLSYPAEEGPETSVIMHPSTSSSEADSTTSHPASDSWATTTLQPTSLQPELSSHTSSGSPSTKLPLTSHSSPPSSISLTTPHWSSTHSNPSTVPSSMFPASTDGTTLASGLGDTGAPELHRDPGVVVAVCLLVSLLLIGSVVMAVRHCHKGVSEFQELDEGLVSRRSFSAHHPME", "length": 210, "header": "tr|F1S915-1|F1S915_PIG Isoform 1 of Colon, intestine and stomach enriched 1 OS=Sus scrofa OX=9823 GN=CIST1 PE=4 SV=3 CANONICAL=F1S915-1" }, "isoforms": [ { "isoform_ac": "F1S915-1", "url": "https://www.uniprot.org/uniprotkb/F1S915/entry#F1S915-1", "sequence": { "sequence": "MAGSQLPPLPLLLLVLLLPLIPSDTMASDAANSSSSLSYPAEEGPETSVIMHPSTSSSEADSTTSHPASDSWATTTLQPTSLQPELSSHTSSGSPSTKLPLTSHSSPPSSISLTTPHWSSTHSNPSTVPSSMFPASTDGTTLASGLGDTGAPELHRDPGVVVAVCLLVSLLLIGSVVMAVRHCHKGVSEFQELDEGLVSRRSFSAHHPME", "length": 210, "header": "tr|F1S915-1|F1S915_PIG Isoform 1 of Colon, intestine and stomach enriched 1 OS=Sus scrofa OX=9823 GN=CIST1 PE=4 SV=3 CANONICAL=F1S915-1" }, "locus": { 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"glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S924", "url": "https://www.uniprot.org/uniprotkb/F1S924" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518956", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518956", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AF79-1", "protein_name": "Coiled-coil domain containing 124", "gene_name": "CCDC124", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPKKFQGENTKSAAARARKAEAKAAADAKRQQELEDAYWKDDDKHVMRKEQRKEEREKRRLEQLERKKELQRLLEEEDSKLKGKSPKQATPGKVTRAQIEETIRKDQQQKENADTAEKEKTHLEVPLEENINRRVLEEGTVEARTIEDAIAVLRYVANDVDRHPERRMKAAFTAFEEVNLPRLKQENPNMRLSQLKQLLKKEWMKSPENPMNQRHKAYNSQK", "length": 222 }, "evidence": [ { "id": "F1S924", "url": "https://omabrowser.org/oma/group/F1S924/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZUL1-1", "protein_name": "Coiled-coil domain containing 124", "gene_name": "Ccdc124", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1S970", "url": "https://www.uniprot.org/uniprotkb/F1S970" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1S970", "url": "https://www.uniprot.org/uniprotkb/F1S970" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S970", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S970" }, { "id": "PS51053", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51053" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SERTA", "eco_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S971-1", "uniprot_ac": "F1S971", "uniprot_id": "F1S971_PIG", "mass": { "chemical_mass": 168881.0, "monoisotopic_mass": 168881.0 }, "refseq": {}, "gene_names": [ { "name": "CEP170B", "type": "recommended", "evidence": [ { "id": "F1S971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S971" } ] } ], "protein_names": [ { "name": "Centrosomal protein 170B", "type": "synonym", "evidence": [ { "id": "F1S971", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S971/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S971", "url": "https://www.uniprot.org/uniprotkb/F1S971" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CEP170B", "url": "https://www.uniprot.org/uniprotkb/F1S971", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000002558", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002558", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22725", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22725", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000253", "database": "InterPro", "categories": [ "Protein 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF15308", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2RBD0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBD0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBD0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S971", "url": "https://www.uniprot.org/uniprotkb/F1S971", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S971-1", "url": "https://www.uniprot.org/uniprotkb/F1S971-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1575, "header": "tr|F1S971-1|F1S971_PIG Isoform 1 of Centrosomal protein 170B OS=Sus scrofa OX=9823 GN=CEP170B PE=1 SV=3 CANONICAL=F1S971-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RBD0-1", "url": "https://www.uniprot.org/uniprotkb/F1S971/entry#A0A5G2RBD0-1", "sequence": { "sequence": 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"length": 1519, "header": "tr|A0A5G2RBD0-1|A0A5G2RBD0_PIG Computationally mapped isoform of Centrosomal protein 170B OS=Sus scrofa OX=9823 GN=CEP170B PE=1 SV=1 CANONICAL=F1S971-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 3129323, "end_pos": 3108921, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072038.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072038.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073630.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073630.1" } ] } }, { "isoform_ac": "F1S971-1", "url": "https://www.uniprot.org/uniprotkb/F1S971/entry#F1S971-1", "sequence": { "sequence": "MSVTSWFLVSSSGTRHRLPRELIFVGRDECELMLQSRSVDKQHAVINYDQDRDEHWVKDLGSLNGTFVNDVRIPDQKYVTLKLNDVIRFGYDILSPCRVQHRVPEEALRHEKYTSQLQVGIKSPVPKRGEALPEHAPYCEASNPRPEKGDRRLTAEAAAYRTPLYGQPSWWGEDDGGSPAEDRRQDESYAERPKEPAQQGGDLAGPMASFQAPPEPQGYSFRREPSYFEIPTKETPPPRTPEVPPHEAPTRDAELGGGGAAPVVQSHACFTIEFDDCSPGKVKIKDHVTKFSLRQRRPPGREATPGETVSAETKVADWLVQNDPSLLPRASPGDDRHSTKSDLPVHTRTLKGHRHEDGTQSDSEDPVAKAAGAAGVPADAGGEQVRLQRQIKRDPQELLHNQQAFVIEFFDEDTPRKKRSQSFTHTPPGDPRPERRRGPGPADRDRPAAPAPAPARGPGSSAGPQRASSLKREKTEERLGSPSPAVRASARPFGSVGRRSRLAQDFMAQCLRDGSPAARPGPEKPPPPLPAPVTPRGASPVVPSTPPPPPADPHVTKARKQEEDDSLSDAGTYTIETEAQDQEVEEARKMIDQVFGVLESPELSRAASAAFRPVIRGDRDEPSDGVAQRMALLQDFASRPVSATPQVELQGVPVPGSPGGQKWVSRWASLADSYSDPGLSEDGAGRRAGELDGALPVRQRRLLPQLPSDRADSPAGPEAARRSGPGPPEPGSEQAGPLLGQEDLEPDSLSDASGSDGGRGPEPGSGPQEGLAWTRGRRSPRAPMEPAPTSFFIGDQNGEAAFPRKAAVAPGEGEAAGRAAQPSPPPRDGRYVSTSGRMVVQLRTGRSPEPPKEALGLGRQESFTKEPASGPAAPGQLPHIPSHPLLQDLATARAARMDLHSQDTHLILKETETALAALEARLLSKSMEEPEGQVGTAPGRPEDSVSGDSDVDTASTVSLLSGKNGPSPTSPQPTGLPKERLPPPPAAQDPGSGALNSARERLSEKQRRPPGPTDASRGEPARRLAVRRGHGPRGSLDWPDEERGSTPAHPPGPDTGPSDHEAPAAPAAGRPGPRRKPTAPPPSPAAREEQSRGSAGVQKVQQVLTRSNSLSTPRPTRASRLRRARLGDASDTEAADGERGPPANPEPVGRPAAEQAKKLSRLDILALPRKRAGSFTGPSDSEAAPTRPGFSGRSAELYCAGRKPSMAEARATAKKAANTTAAPRQPFSRARPGSARYASPNARRRQQGSDCTSTSEEEYGSHHGSPKHTRSHASTATQTPRAGSSVRARPRAPGLRDTDDEEEEPDPYGFIVQTAEIAEIARLSQTLVKDVAILAREIHDVAGDGDSLGSPGPARSPSLNNVPSTPASTISAREELVQRIPEASLNFQKVPPGSLSSRDLDQNMNDRCEDPLANKTRPRNREEVIFDNLMLNPVSQLSHAIRENTEHLAEKMKILFQNTGRAWEELEARINAEHEVPILKTSNKEISSILKELRRVQKQLEVINAIVDPAGSLDALPGSRASAGPAQLGKGWPAAQSPSSPASALPSRSVPQRANCGSPGLPDPPFLPDSDRFLL", "length": 1575, "header": "tr|F1S971-1|F1S971_PIG Isoform 1 of Centrosomal protein 170B OS=Sus scrofa OX=9823 GN=CEP170B PE=1 SV=3 CANONICAL=F1S971-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 3129323, "end_pos": 3108921, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002843.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002843.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002771.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002771.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1013, "start_aa": "Thr", "end_pos": 1013, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1013", "evidence": [ { "id": "GLY_001152", 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"MLYQEQQKMNEPQEPVSFKDVAVDFTQEEWLQLDADEKTTYRDVMLENYSHLVSVGYDSTKPNVIIRLEQGEEPWVADSELPQQCHPEEVWKVDDLIEIIQEHEDECSNQAVSINSRTPIEEKENAFDKMYSMETGLVPSSIFSHNCVSCGKTLESASELIISDGSYARKKPNECSECGKTYDGGKLYEFHQNGETCSQNEESIQKINILEKPFEYNECTEALGKEAVFITHKRAYIGEKPYEWSDSGSDFIQMSNFSVYQRSQMELKPFECSECGKSFCKKSKFIIHQRAHTGEKPYECNVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGEKPYECNECGKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGEKLYKCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECNECGKTFNLNSAFIRHRKVHTDEKPHECSECGKLSYLTDHHTAPLGEKPYECSECGKTFLENSAFSGLQSLPKGEKSYECNICGKLFSELSYYTVHYRSHSEEKPYGCNECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHRRGNMNVLDVGSLL", "length": 722, "header": "tr|F1S9G1-1|F1S9G1_PIG Isoform 1 of RB-associated KRAB zinc finger protein OS=Sus scrofa OX=9823 GN=RBAK PE=3 SV=3 CANONICAL=F1S9G1-1" }, "isoforms": [ { "isoform_ac": "F1S9G1-1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1/entry#F1S9G1-1", "sequence": { "sequence": "MLYQEQQKMNEPQEPVSFKDVAVDFTQEEWLQLDADEKTTYRDVMLENYSHLVSVGYDSTKPNVIIRLEQGEEPWVADSELPQQCHPEEVWKVDDLIEIIQEHEDECSNQAVSINSRTPIEEKENAFDKMYSMETGLVPSSIFSHNCVSCGKTLESASELIISDGSYARKKPNECSECGKTYDGGKLYEFHQNGETCSQNEESIQKINILEKPFEYNECTEALGKEAVFITHKRAYIGEKPYEWSDSGSDFIQMSNFSVYQRSQMELKPFECSECGKSFCKKSKFIIHQRAHTGEKPYECNVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGEKPYECNECGKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGEKLYKCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECNECGKTFNLNSAFIRHRKVHTDEKPHECSECGKLSYLTDHHTAPLGEKPYECSECGKTFLENSAFSGLQSLPKGEKSYECNICGKLFSELSYYTVHYRSHSEEKPYGCNECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHRRGNMNVLDVGSLL", "length": 722, "header": "tr|F1S9G1-1|F1S9G1_PIG Isoform 1 of RB-associated KRAB zinc finger protein OS=Sus scrofa OX=9823 GN=RBAK PE=3 SV=3 CANONICAL=F1S9G1-1" }, "locus": { "chromosome": "3", "start_pos": 4438171, "end_pos": 4423819, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009485.4", "url": "https://www.ensembl.org/id/ENSSSCT00000009485.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009241.3", "url": "https://www.ensembl.org/id/ENSSSCP00000009241.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620178", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620178", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M5D2-1", "protein_name": "RB-associated KRAB zinc finger protein", "gene_name": "Rbak", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSRSKGPLSFKDVAVAFTQEEWRQLGSEEKTTYRDVMLENYSNLISVGYDVTKPNVIIKLEQGEEPWMMEGDCHAQSHLEISKVGDTIEKIQENEDKHTRQADDLNNQRAEKGDTSDKIYDLEPHLISSSTRAHSCVSCGKTLESISALISSDGRYAVEKPNKCIDCGKTYREKLDDFNQNGDTSQHDESILQKITILEKPFDYECMEALDSESVFMAHERTYLGEKPYEWDDSGPDFIQMSDFNAYQRSQLEMKPFECTQCGKSFCKKSKFIIHQRAHTGEKPYACNVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGEKPYECSECGKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALNDHQRTHTGEKLYKCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECTECGKTFNLNSAFIRHRKVHTEERVHECSECGKFSQLQCLPDHTNDTGEKHYECNECGKTFLENSAFSGHQSIPEGEKTYDCNICGKSFSDLSYYTVHYRGHSEDKPFGCNECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHKRGNVNVLNVESL", "length": 710 }, "evidence": [ { "id": "F1S9G1", "url": "https://omabrowser.org/oma/group/F1S9G1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F1M2Y6-1", "protein_name": "RB-associated KRAB zinc finger", "gene_name": "Rbak", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSISKGPLSFKDVAVAFSQEEWQQLDSEERTTYRDVMLETYSNLVSVGYDVTKPNVIIKLEQGEEPWTVEGDRHAKRHLEIKKVDDPREGIQENGEKHLQCGDDLHSWRAEKGDEFDEACTLEPPLISPSSGAHSCVSCGKTLESVTELICSDGSYAVEKPDKCFECGKGYRENPEDLNQSEGNSSERDESILQKITILEKPFDYECLEALDRESVFMAHERAYMGEKPYEWNGSGPDFIQISDFSTYHRSQVEMKPFECTQCGKSFCKKSKFIIHQRAHTGEKPYACGVCGKSFSQKGTLTVHRRSHLEEKPYKCDECGKTFCQKLHLTQHQRTHSGEKPYECSECGKTFCQKTHLTLHQRNHSGERPYPCSECGKSFSRKSALNDHQRTHTGEKLYTCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECTECGKTFNLNSAFTRHRKAHAEERVQECGECGKPSRLQYLPDHADGLGEKHHGCNECGKTFLENSAFSRHQPVPEGEKTYECNICGKVFSDLSCYTVHYRGHSEEKPFGCSECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHKRGTINVLNVENL", "length": 711 }, "evidence": [ { "id": "F1S9G1", "url": "https://omabrowser.org/oma/group/F1S9G1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MHZ4-1", "protein_name": "RB-associated KRAB zinc finger protein", "gene_name": "RBAK", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNESQGSVSFRDVAVDFTQEEWQQLDPEEKMTYRDVMLENYSHLVSVGYDSTKPNVIIKLEQGEEPWVVDSKFLQQQHSEKVWKVGDLIERIQENGDECSRQAVSINSRTLTEEREDAFDKTYNVETSLAPLNLTSYNCISCGKTLESTSELIISDGSYARKKPDECNECGKMYGEKLYEFHQNGEACSQNEESIQKISILEKPFEYNGCTEALDNEAVFITHKSTYMGEKCYEWNDSRPDFIQMSNFNIYQRSQMDLKPFECRECGKSFCKKSKFIIHQRAHTGEKPYACTVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGEKPYECNECGKTFCQKTHLTLHQRNHSGERPYPCSECGKSFSRKSALSDHQRTHTGEKLYKCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECNECGKTFNLNSAFIRHRKVHTDEKPHECSECGKLSHLTSLHTTHLGEKPYECSECGKTFLENSAFNGHQPLPTGEKSYECNICGKVFSELSYYTIHYRSHSEEKPYGCNECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHRRGNLNVLDMGSLL", "length": 713 }, "evidence": [ { "id": "F1S9G1", "url": "https://omabrowser.org/oma/group/F1S9G1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8BQC8-1", "protein_name": "RB-associated KRAB zinc finger protein", "gene_name": "Rbak", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSRSKGPLSFKDVAVAFSQEEWQQLDPEERTTYRDVMLETYSNLVSVGYDVTKPNMIIKLEQGEEPWTVEGDRHAQRHLEISKVYDPREGIEEIGEKHLQCDDDPYCWRAEKGAAFDEAYTLETALISPSSGAHSCVSCGETLESVSELISSDGSYALEKPSMCFECGKAYGESLEDFNQDEGNSSQHDENILQKVTILEKPFAYECMEALDSESVFMARERAYMGEKPYDWGDSGPDFIQMSDFSTYPRSQMELKPFECTQCGKSFCKKSKFIIHQRAHTGEKPYACSVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHQRTHSGEKPYECSECGKSFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALNDHQRTHTGEKLYKCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECTECGKTFNLNSAFIRHWKVHAEERVQECGECGKPSPLQCAPDHTGDLGEKRYECNECGKTFLDSSAFHRHQSVPEGEKTYECNICGKSFSDSSCYTVHYRGHSEEKPFGCSECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHKRGTVNVLTVEKL", "length": 711 }, "evidence": [ { "id": "F1S9G1", "url": "https://omabrowser.org/oma/group/F1S9G1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NYW8-1", "protein_name": "RB-associated KRAB zinc finger protein", "gene_name": "RBAK", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNTLQGPVSFKDVAVDFTQEEWQQLDPDEKITYRDVMLENYSHLVSVGYDTTKPNVIIKLEQGEEPWIMGGEFPCQHSPEAWRVDDLIERIQENEDKHSRQAACINSKTLTEEKENTFSQIYMETSLVPSSIIAHNCVSCGKNLESISQLISSDGSYARTKPDECNECGKTYHGEKMCEFNQNGDTYSHNEENILQKISILEKPFEYNECMEALDNEAVFIAHKRAYIGEKPYEWNDSGPDFIQMSNFNAYQRSQMEMKPFECSECGKSFCKKSKFIIHQRAHTGEKPYECNVCGKSFSQKGTLTVHRRSHLEEKPYKCNECGKTFCQKLHLTQHLRTHSGEKPYECSECGKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGEKLYKCNECGKSYYRKSTLITHQRTHTGEKPYQCSECGKFFSRVSYLTIHYRSHLEEKPYECNECGKTFNLNSAFIRHRKVHTEEKSHECSECGKFSQLYLTDHHTAHLEEKPYECNECGKTFLVNSAFDGHQPLPKGEKSYECNVCGKLFNELSYYTEHYRSHSEEKPYGCSECGKTFSHNSSLFRHQRVHTGEKPYECYECGKFFSQKSYLTIHHRIHSGEKPYECSKCGKVFSRMSNLTVHYRSHSGEKPYECNECGKVFSQKSYLTVHYRTHSGEKPYECNECGKKFHHRSAFNSHQRIHRRGNMNVLDVENL", "length": 714 }, "evidence": [ { "id": "F1S9G1", "url": "https://omabrowser.org/oma/group/F1S9G1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "F1S9G1", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 256, "end_pos": 258, "annotation": "n_glycosylation_sequon" }, { "start_pos": 375, "end_pos": 377, "annotation": "n_glycosylation_sequon" }, { "start_pos": 48, "end_pos": 50, "annotation": "n_glycosylation_sequon" }, { "start_pos": 586, "end_pos": 588, "annotation": "n_glycosylation_sequon" }, { "start_pos": 644, "end_pos": 646, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S9G1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 722, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S9G1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S9G1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S9G1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 270, "end_pos": 297, "start_aa": "Phe", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1S9G1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9G1" }, { "id": "PS50805", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50805" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KRAB", "eco_id": "ECO_0000259", "start_pos": 16, "end_pos": 87, "start_aa": "Val", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 256, "end_pos": 258 }, { "start_pos": 375, "end_pos": 377 }, { "start_pos": 48, "end_pos": 50 }, { "start_pos": 586, "end_pos": 588 }, { "start_pos": 644, "end_pos": 646 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S9N3", "url": "https://www.uniprot.org/uniprotkb/F1S9N3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525119", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525119", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZLT4-1", "protein_name": "Olfactory receptor family 4 subfamily D member 5", "gene_name": "Or4d5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNPANHSQVATFVLLGLSQVWELRLLFFTVFSAVYLLTVAGNLLIVAIVTSDPRLHTTMYFLLGNLSFLDFCYSSITAPRMLVDLLSHNPTISFGACLTQLFFFHFIGGIKIFLLTVMAYDRYIAICQPLRYTVIMNQTVCGLFMGASWVGGFIHSIVQIGLTIHLPFCGPDKLDNFYCDVPQLIKLACTDTFVLELLMVSNNGLVTLMCFLVLLGPYTALLVMLRSHSKEGRSKALSTCASHIAVVTIIFVPCIYIYARPFRTFPMDKAVSVLYTMVTPMLNPAIYTLRNKEVIAAMKKLWRRQKDFLGPSDH", "length": 314 }, "evidence": [ { "id": "F1S9N3", "url": "https://omabrowser.org/oma/group/F1S9N3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BEI5-1", "protein_name": "Olfactory receptor family 4 subfamily D member 5", "gene_name": "OR4D5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTTANHSQVTGFVLLGFSQVWELRLFFFIVFSVVYLMTVTGNLLIVAVVTSDPRLHTTMYFLLGNLSFLDFCYSSIMAPRMLADLLSRKPVISFGGCLTQLFFFHFIGGIKIFLLTVMVYDRYVAISQPLRYMLIMNRTVCGLLVAASWVGGFIHSIAQVGLTAQLPFCGPDKLDNFYCDVPQLIKLACTDTFVLELLMVSNNGLVTLMCFLVLLGSYTALLVMLRSHSREGRSKALSTCASHIAVVTLIFVPCLYIYARPFRTFPMDKVVSVLYTMVTPMLNPAIYTLRNKEVIIAMKKLWRRQKDLLDPLEH", "length": 314 }, "evidence": [ { "id": "F1S9N3", "url": "https://omabrowser.org/oma/group/F1S9N3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8NGN0-1", "protein_name": "Olfactory receptor 4D5", "gene_name": "OR4D5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPANHSQVAGFVLLGLSQVWELRFVFFTVFSAVYFMTVVGNLLIVVIVTSDPHLHTTMYFLLGNLSFLDFCYSSITAPRMLVDLLSGNPTISFGGCLTQLFFFHFIGGIKIFLLTVMAYDRYIAISQPLHYTLIMNQTVCALLMAASWVGGFIHSIVQIALTIQLPFCGPDKLDNFYCDVPQLIKLACTDTFVLELLMVSNNGLVTLMCFLVLLGSYTALLVMLRSHSREGRSKALSTCASHIAVVTLIFVPCIYVYTRPFRTFPMDKAVSVLYTIVTPMLNPAIYTLRNKEVIMAMKKLWRRKKDPIGPLEHRPLH", "length": 318 }, "evidence": [ { "id": "F1S9N3", "url": "https://omabrowser.org/oma/group/F1S9N3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8VFN1-1", "protein_name": "Olfactory receptor family 4 subfamily D member 5", "gene_name": "Or4d5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNPANHSQVATFFLLGLSQVWELRFLFFTVFSAVYLLTVTGNLLIVAIVTSDPRLHTTMYFLLGNLSFLDFCYSSITAPRMLVDLLSHSPTISFGACLTQLFFFHFIGGIKIFLLTVMAYDRYIAISQPLRYTLIMNQTVCGIFMAASWVGGFIHSIVQVGLTIHLPFCGPDKLDNFYCDVPQLIKLACTDTFVLELLMVSNNGLVTLMCFLVLLGSYTALLVMLRSHSKEGRSKALSTCASHITVVTIIFVPCIYIYARPFRTFPMDKAVSVLYTMVTPMLNPAIYTLRNKEVIVAMKKLWRRKKDFLGSSDH", "length": 314 }, "evidence": [ { "id": "F1S9N3", "url": "https://omabrowser.org/oma/group/F1S9N3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "F1S9N3", "url": "https://www.uniprot.org/uniprotkb/F1S9N3" } ], "pmid": "" }, { "name": "olfactory receptor activity", "id": "GO:0004984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004984", "evidence": [ { "database": "UniProtKB", "id": "F1S9N3", "url": "https://www.uniprot.org/uniprotkb/F1S9N3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1S9N3", "url": "https://www.uniprot.org/uniprotkb/F1S9N3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 137, "end_pos": 139, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" }, { "start_pos": 65, "end_pos": 67, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S9N3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 314, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S9N3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S9N3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S9N3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9N3" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 41, "end_pos": 287, "start_aa": "Gly", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 137, "end_pos": 139 }, { "start_pos": 5, "end_pos": 7 }, { "start_pos": 65, "end_pos": 67 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S9Q6-1", "uniprot_ac": "F1S9Q6", "uniprot_id": "F1S9Q6_PIG", "mass": { "chemical_mass": 44905.0, "monoisotopic_mass": 44905.0 }, "refseq": { "ac": "XP_020918681", "name": "cytotoxic and regulatory T-cell molecule isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918681" }, "gene_names": [ { "name": "CRTAM", "type": "recommended", "evidence": [ { "id": "F1S9Q6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9Q6" } ] }, { 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"CRTAM", "url": "https://www.uniprot.org/uniprotkb/F1S9Q6", "locus": { "chromosome": "9", "start_pos": 49811312, "end_pos": 49783909, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015137", "url": "https://www.ensembl.org/id/ENSSSCG00000015137" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015137", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015137", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100521388", "url": "https://www.ncbi.nlm.nih.gov/gene/100521388", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013162", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013162", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521388", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521388", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GVYKCFY", "url": "https://omabrowser.org/oma/group/GVYKCFY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287A004", "url": "https://www.orthodb.org/?gene=A0A287A004", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47118", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47118", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47118:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47118:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08205", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08205", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-198933", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-198933", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020918681", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918681", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A004", "url": "https://www.uniprot.org/uniprotkb/A0A287A004", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A004-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A004-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9Q6", "url": "https://www.uniprot.org/uniprotkb/F1S9Q6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9Q6-1", "url": "https://www.uniprot.org/uniprotkb/F1S9Q6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWWRVCSLLAWFPLQEAFRTNHQETITVEEGQRLTLNCSVAQTENTFLQWLDPSGFTIYFNEHPALKNSKYQLLHHSSNELSIIVRNVTQQDEGVYKCLHYSSSVRTKEVKVIVIETPVMPTLEVSVIRRQDGEHVILKCSTVRSKPPPQITWLLGDDMELYGETRHEFETDGKKCNTTSTLRVHTYGKNSTVDCIIRHKGMPGRKLVAPFRFEDLVTDQQTASDALRTSPLSSQDPQQPTSTVAVVEESRTSEIDKEEEEQTTQGSYFITEANRQYVGLTRKKSGILLLTLVSFLIFILFIIVQLFIMKLRKAHVIWKKENEISEYTLESYRSRSNNEETSSQEKNGHTCHSKSCMNYITQLYSEAKTKTKGKAQASKLKGEPTPMPESIV", "length": 392, "header": "tr|F1S9Q6-1|F1S9Q6_PIG Isoform 1 of Cytotoxic and regulatory T cell molecule OS=Sus scrofa OX=9823 GN=CRTAM PE=4 SV=1 CANONICAL=F1S9Q6-1" }, "isoforms": [ { "isoform_ac": "A0A287A004-1", "url": "https://www.uniprot.org/uniprotkb/F1S9Q6/entry#A0A287A004-1", "sequence": { "sequence": "MFLANLPTCESRLSRRTDYRSNPEAFRTNHQETITVEEGQRLTLNCSVAQTENTFLQWLDPSGFTIYFNEHPALKNSKYQLLHHSSNELSIIVRNVTQQDEGVYKCLHYSSSVRTKEVKVIVIETPVMPTLEVSVIRRQDGEHVILKCSTVRSKPPPQITWLLGDDMELYGETRHEFETDGKKCNTTSTLRVHTYGKNSTVDCIIRHKGMPGRKLVAPFRFEDLVTDQQTASDALRTSPLSSQDPQQPTSTVAVVEESRTSEIDKEEEEQTTQGSYFITEANRQYVGLTRKKSGILLLTLVSFLIFILFIIVQLFIMKLRKAHVIWKKENEISEYTLESYRSRSNNEETSSQEKNGHTCHSKSCMNYITQLYSEAKTKTKGKAQASKLKGEPTPMPESIV", "length": 400, "header": "tr|A0A287A004-1|A0A287A004_PIG Computationally mapped isoform of Cytotoxic and regulatory T cell molecule OS=Sus scrofa OX=9823 GN=CRTAM PE=4 SV=2 CANONICAL=F1S9Q6-1" }, "locus": { "chromosome": "9", "start_pos": 49810130, "end_pos": 49784045, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050387.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050387.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037057.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037057.2" } ] } }, { "isoform_ac": "F1S9Q6-1", "url": "https://www.uniprot.org/uniprotkb/F1S9Q6/entry#F1S9Q6-1", "sequence": { "sequence": "MWWRVCSLLAWFPLQEAFRTNHQETITVEEGQRLTLNCSVAQTENTFLQWLDPSGFTIYFNEHPALKNSKYQLLHHSSNELSIIVRNVTQQDEGVYKCLHYSSSVRTKEVKVIVIETPVMPTLEVSVIRRQDGEHVILKCSTVRSKPPPQITWLLGDDMELYGETRHEFETDGKKCNTTSTLRVHTYGKNSTVDCIIRHKGMPGRKLVAPFRFEDLVTDQQTASDALRTSPLSSQDPQQPTSTVAVVEESRTSEIDKEEEEQTTQGSYFITEANRQYVGLTRKKSGILLLTLVSFLIFILFIIVQLFIMKLRKAHVIWKKENEISEYTLESYRSRSNNEETSSQEKNGHTCHSKSCMNYITQLYSEAKTKTKGKAQASKLKGEPTPMPESIV", "length": 392, "header": "tr|F1S9Q6-1|F1S9Q6_PIG Isoform 1 of Cytotoxic and regulatory T cell molecule OS=Sus scrofa OX=9823 GN=CRTAM PE=4 SV=1 CANONICAL=F1S9Q6-1" }, "locus": { "chromosome": "9", "start_pos": 49810130, "end_pos": 49783955, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016503.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016503.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016060.2", "url": "https://www.ensembl.org/id/ENSSSCP00000016060.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S9Q6", "url": "https://www.uniprot.org/uniprotkb/F1S9Q6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521388", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521388", "resource": "KEGG Pathway" }, { "id": "R-SSC-198933", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-198933", "resource": "Reactome", "description": "Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZNM6-1", "protein_name": "Cytotoxic and regulatory T cell molecule", "gene_name": "Crtam", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"MEIKQAFVIHFLMLIAAGLRECLATKFIAVVEGDTLVLKCPRRNLSDNVHMEWRKEGHVMFFNTHKGLKDPRINLFTSNSFEFTVVVSNVTFKDEGLYRCFVYEDQVSTKRFKVKVLGSPKIDMTEHEGKAVIKCTTAANGHPPKLSWQIGGVEVEAVPNTWLEERSNRTFAVSILTIKTHIREATVKCLAKHRELQNKVMNFIIIQNHSIISSTTSIYSTRDDLKTETMITATSPPVISSTTPVELSSISESTGVFATEDTTSKSIQVEEHSTEFDISLTTHDITSSESNSTDGFLTNNSTNIQDDGDKDRQYNQKKSSPLLILLVTTLIICLLIVVIFFLIRLRKTHIAWKKENEESDQSVESSKSKASHEEKQAHDRRRPGFWNSNFTVYKVEEPPQNTTVSVATIDVINEAQDNSKTACNQQDKACVKETEL", "length": 436 }, "evidence": [ { "id": "F1S9Q6", "url": "https://omabrowser.org/oma/group/F1S9Q6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0ZYS6-1", "protein_name": "Cytotoxic and regulatory T-cell molecule", "gene_name": "CRTAM", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"equation": "tRNA(Asp) + L-aspartate + ATP = L-aspartyl-tRNA(Asp) + AMP + diphosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19649", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19649" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S742", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S742" }, { "id": "PS50862", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50862" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Aminoacyl-transfer RNA synthetases class-II family profile", "eco_id": "ECO_0000259", "start_pos": 185, "end_pos": 602, "start_aa": "Leu", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S8T6-1", "uniprot_ac": "F1S8T6", "uniprot_id": "F1S8T6_PIG", "mass": { "chemical_mass": 97018.0, "monoisotopic_mass": 97018.0 }, "refseq": {}, "gene_names": [ { "name": "OGA", "type": "recommended", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ] } ], "protein_names": [ { "name": "Protein O-GlcNAcase", "type": "recommended", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#names_and_taxonomy" } ] }, { "name": "3.2.1.169", "type": "synonym", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#names_and_taxonomy" } ] }, { "name": "Beta-N-acetylhexosaminidase", "type": "synonym", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#names_and_taxonomy" } ] }, { "name": "Beta-hexosaminidase", "type": "synonym", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#names_and_taxonomy" } ] }, { "name": "Meningioma-expressed antigen 5", "type": "synonym", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#names_and_taxonomy" } ] }, { "name": "N-acetyl-beta-D-glucosaminidase", "type": "synonym", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#names_and_taxonomy" } ] }, { "name": "N-acetyl-beta-glucosaminidase", "type": "synonym", "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Cleaves GlcNAc but not GalNAc from O-glycosylated proteins. Deglycosylates a large and diverse number of proteins, such as CRYAB, ELK1, GSDMD, LMNB1 and TAB1. Can use p-nitrophenyl-beta-GlcNAc and 4-methylumbelliferone-GlcNAc as substrates but not p-nitrophenyl-beta-GalNAc or p-nitrophenyl-alpha-GlcNAc (in vitro). Does not bind acetyl-CoA and does not have histone acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R9Q3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9Q3#function" }, { "database": "UniProtKB", "id": "ARBA00053832", "url": "https://www.uniprot.org/uniprotkb/ARBA00053832#function" }, { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6#function" }, { "database": "UniProtKB", "id": "A0A287A1M3", "url": "https://www.uniprot.org/uniprotkb/A0A287A1M3#function" }, { "database": "UniProtKB", "id": "A0A287ATD4", "url": "https://www.uniprot.org/uniprotkb/A0A287ATD4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OGA", "url": "https://www.uniprot.org/uniprotkb/F1S8T6", "locus": { "chromosome": "14", "start_pos": 112822499, "end_pos": 112851203, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010569", "url": "https://www.ensembl.org/id/ENSSSCG00000010569" } ] } } ], "crossref": [ { "id": "F1S8T6", "url": "https://alphafold.ebi.ac.uk/entry/F1S8T6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010569", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010569", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100152585", "url": "https://www.ncbi.nlm.nih.gov/gene/100152585", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016181", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016181", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017853", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017853", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051822", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051822", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152585", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152585", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287ATD4", "url": "https://www.orthodb.org/?gene=A0A287ATD4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13170", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13170", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13170:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13170:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07555", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07555", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "48876", "url": "https://www.rhea-db.org/rhea/48876", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "48892", "url": "https://www.rhea-db.org/rhea/48892", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZKJ7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKJ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKJ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A1M3", "url": "https://www.uniprot.org/uniprotkb/A0A287A1M3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A1M3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A1M3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATD4", "url": "https://www.uniprot.org/uniprotkb/A0A287ATD4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATD4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATD4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AUH3", "url": "https://www.uniprot.org/uniprotkb/A0A287AUH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AUH3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AUH3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3Y8", "url": "https://www.uniprot.org/uniprotkb/A0A287B3Y8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3Y8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B3Y8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9Q3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9Q3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9Q3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9Q3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFX4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFX4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFX4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S8T6-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 863, "header": "tr|F1S8T6-1|F1S8T6_PIG Isoform 1 of Protein O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=2 CANONICAL=F1S8T6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKJ7-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#A0A286ZKJ7-1", "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 823, "header": "tr|A0A286ZKJ7-1|A0A286ZKJ7_PIG Computationally mapped isoform of protein O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=1 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112850776, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038930.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038930.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031980.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031980.1" } ] } }, { "isoform_ac": "A0A287A1M3-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#A0A287A1M3-1", "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESITNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 890, "header": "tr|A0A287A1M3-1|A0A287A1M3_PIG Computationally mapped isoform of Protein O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=2 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112850776, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052888.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052888.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037827.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037827.2" } ] } }, { "isoform_ac": "A0A287ATD4-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#A0A287ATD4-1", "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 916, "header": "tr|A0A287ATD4-1|A0A287ATD4_PIG Computationally mapped isoform of Protein O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=1 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112850776, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050574.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050574.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047348.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047348.1" } ] } }, { "isoform_ac": "A0A287AUH3-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#A0A287AUH3-1", "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 883, "header": "tr|A0A287AUH3-1|A0A287AUH3_PIG Computationally mapped isoform of O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=1 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112850776, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039103.2", "url": "https://www.ensembl.org/id/ENSSSCT00000039103.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047575.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047575.1" } ] } }, { "isoform_ac": "A0A287B3Y8-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#A0A287B3Y8-1", "sequence": { "sequence": "MEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTAEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTADSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 748, "header": "tr|A0A287B3Y8-1|A0A287B3Y8_PIG Computationally mapped isoform of O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=2 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112847810, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046580.2", "url": "https://www.ensembl.org/id/ENSSSCT00000046580.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050976.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050976.2" } ] } }, { "isoform_ac": "A0A5G2R9Q3-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#A0A5G2R9Q3-1", "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTADSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 821, "header": "tr|A0A5G2R9Q3-1|A0A5G2R9Q3_PIG Computationally mapped isoform of Protein O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=1 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112850776, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067250.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067250.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073791.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073791.1" } ] } }, { "isoform_ac": "A0A8W4FFX4-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#A0A8W4FFX4-1", "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 872, "header": "tr|A0A8W4FFX4-1|A0A8W4FFX4_PIG Computationally mapped isoform of O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=1 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112850776, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093556.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093556.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077770.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077770.1" } ] } }, { "isoform_ac": "F1S8T6-1", "url": "https://www.uniprot.org/uniprotkb/F1S8T6/entry#F1S8T6-1", "sequence": { "sequence": "MVQKESQAALEERESELNSNPAASAGSSLEPPAAPAPGEDNPTGAGGAVVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEISTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGESTALTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILTEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCINDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL", "length": 863, "header": "tr|F1S8T6-1|F1S8T6_PIG Isoform 1 of Protein O-GlcNAcase OS=Sus scrofa OX=9823 GN=OGA PE=1 SV=2 CANONICAL=F1S8T6-1" }, "locus": { "chromosome": "14", "start_pos": 112850776, "end_pos": 112824514, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011561.4", "url": "https://www.ensembl.org/id/ENSSSCT00000011561.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011259.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011259.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152585", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152585", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "carbohydrate derivative metabolic process", "id": "GO:1901135", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901135", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" }, { "name": "N-acetylglucosamine metabolic process", "id": "GO:0006044", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006044", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" }, { "name": "glycoprotein metabolic process", "id": "GO:0009100", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009100", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "[protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity", "id": "GO:0102571", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102571", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" }, { "name": "hexosaminidase activity", "id": "GO:0015929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015929", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1S8T6", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 227, "end_pos": 229, "annotation": "n_glycosylation_sequon" }, { "start_pos": 371, "end_pos": 373, "annotation": "n_glycosylation_sequon" }, { "start_pos": 535, "end_pos": 537, "annotation": "n_glycosylation_sequon" }, { "start_pos": 580, "end_pos": 582, "annotation": "n_glycosylation_sequon" }, { "start_pos": 818, "end_pos": 820, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "48876", "name": "", "equation": "3-O-(N-acetyl-beta-D-glucosaminyl)-L-seryl-[protein] + H2O = N-acetyl-D-glucosamine + L-seryl-[protein]", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48876", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48876" } ] }, { "id": "48892", "name": "", "equation": "3-O-(N-acetyl-beta-D-glucosaminyl)-L-threonyl-[protein] + H2O = L-threonyl-[protein] + N-acetyl-D-glucosamine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "48892", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/48892" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S8T6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 863, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1S8T6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1S8T6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S8T6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S8T6" }, { "id": "PS52009", "database": "PROSITE", "url": "https://prosite.expasy.org/PS52009" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GH84", "eco_id": "ECO_0000259", "start_pos": 60, "end_pos": 336, "start_aa": "Phe", "end_aa": "Met", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 227, "end_pos": 229 }, { "start_pos": 371, "end_pos": 373 }, { "start_pos": 535, "end_pos": 537 }, { "start_pos": 580, "end_pos": 582 }, { "start_pos": 818, "end_pos": 820 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { 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"https://omabrowser.org/oma/group/ECSWEYE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR23037", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23037", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23037:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23037:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23037:SF35", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23037:SF35", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9020591", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9020591", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9020933", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9020933", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QAF8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAF8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAF8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAF8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QU21", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QU21", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QU21-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QU21-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S921-1", "url": "https://www.uniprot.org/uniprotkb/F1S921-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWQRVTRLVPLFLLLFPRQGAEACSTSRCCFQDPPYPDADSGSASGPRDLNCYRIFNRAGYECSWEYEGPTAGVSHFLRCCLKSGRCCYFATGSATTLQFSDQDGVDVLNAVTLWVESRAANKTEKSPMVTLNLYSSVKYDPPPGNIKVSRSAGQLHMEWETPTRQDGAEIQFRHRTPGSPWMLGDCGRQDDDAGFESCLCPLEMDMAQEFQLRRRRHQGPGVPGGPWSSWSSSVCIPPENPPQAKANFSVEQLRSDGRRQVTLNEQLPQLELPEGCLGNNSGVEMTYHVHLHMLSCPCKAKATRTLRLRKKLVLSGAAYDLALISRNRFGLGPNQTWHLPAYNHSGPGTLNISVGANRTTMHWPVLAQGLTYCIEWQPQGQDDSLVNCTLMTPKDQDPAGMAAYSWSQALGAMGQKVCYRITIFASARPEKPTSWSTVSSTYYFAGNASGAGSPQHVSVKRLNQDSVSVDWTPSLLSACPGVLKEYIVRCHDEDSDQVFELPVKPTETRVTLQGLRAGAAYMVQVRADTAKWQGSWSQPLRFSIEVPVSELRDLSIFLASLGSFMSILLLGVFGYLGLNRVVRHLCPPLPTPCASTAVEFSDSQGKQVWQWTSPADFPEEVSPQEALVVNMSWDKGEGVDPDTPGPLKEKMELPLDAPEPALDMELPLEHRRQAQGHPEPGTLRSGWHGGLEGSPAQTAGLLLLLGDLRQTPRFGSQGERGTSASSYIEED", "length": 732, "header": "tr|F1S921-1|F1S921_PIG Isoform 1 of Interleukin-12 receptor subunit beta-1 OS=Sus scrofa OX=9823 GN=IL12RB1 PE=3 SV=1 CANONICAL=F1S921-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QAF8-1", "url": "https://www.uniprot.org/uniprotkb/F1S921/entry#A0A5G2QAF8-1", "sequence": { "sequence": "LSLSLSIYLSIYLSIYPSIHLSISLSIYILSPSYRIEWKGAHTSRCCFQDPPYPDADSGSASGPRDLNCYRIFNRAGYECSWEYEGPTAGVSHFLRCCLKSGRCCYFATGSATTLQFSDQDGVDVLNAVTLWVESRAANKTEKSPMVTLNLYSSVKYDPPPGNIKVSRSAGQLHMEWETPTRQDGAEIQFRHRTPGSPWMLGDCGRQDDDAGFESCLCPLEMDMAQEFQLRRRRHQGPGVPGGPWSSWSSSVCIPPENPPQAKANFSVEQLRSDGRRQVTLNEQLPQLELPEGCLGNNSGVEMTYHVHLHMLSCPCKAKATRTLRLRKKLVLSGAAYDLALISRNRFGLGPNQTWHLPAYNHSGPGTLNISVGANRTTMHWPVLAQGLTYCIEWQPQGQDDSLVNCTLMTPKDQDPAGMAAYSWSQALGAMGQKVCYRITIFASARPEKPTSWSTVSSTYYFAGNASGAGSPQHVSVKRLNQDSVSVDWTPSLLSACPGVLKEYIVRCHDEDSDQVFELPVKPTETRVTLQGLRAGAAYMVQVRADTAKWQGSWSQPLRFSIEVPVSELRDLSIFLASLGSFMSILLLGVFGYLGLNRVVRHLCPPLPTPCASTAVEFSDSQGKQVWQWTSPADFPEEVSPQEALVVNMSWDKGEGVDPDTPGPLKEKMELPLDAPEPALDMELPLEHRRQAQGHPEPGTLRSGWHGGLEGSPAQTAGLLLLLGDLRQTPRFGSQGERGTSASSYIEED", "length": 749, "header": "tr|A0A5G2QAF8-1|A0A5G2QAF8_PIG Computationally mapped isoform of Interleukin-12 receptor subunit beta-1 OS=Sus scrofa OX=9823 GN=IL12RB1 PE=3 SV=1 CANONICAL=F1S921-1" }, "locus": { "chromosome": "2", "start_pos": 59735387, "end_pos": 59708462, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084931.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084931.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061372.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061372.1" } ] } }, { "isoform_ac": "A0A5G2QU21-1", "url": "https://www.uniprot.org/uniprotkb/F1S921/entry#A0A5G2QU21-1", "sequence": { "sequence": "MWQRVTRLVPLFLLLFPRQGAEACSTSRCCFQDPPYPDADSGSASGPRDLNCYRIFNRAGYECSWEYEGPTAGVSHFLRCCLKSGRCCYFATGSATTLQFSDQDGVDVLNAVTLWVESRAANKTEKSPMVTLNLYSSVKYDPPPGNIKVSRSAGQLHMEWETPTRQDGAEIQFRHRTPGSPWMLGDCGRQDDDAGFESCLCPLEMDMAQEFQLRRRRHQGPGVPGGPWSSWSSSVCIPPENPPQAKANFSVEQLRSDGRRQVTLNEQLPQLELPEGCLGNNSGVEMTYHVHLHMLSCPCKAKATRTLRLRKKLVLSGAAYDLALISRNRFGLGPNQTWHLPAYNHSGPGTLNISVGANRTTMHWPVLAQGLTYCIEWQPQGQDDSLVNCTLMTPKDQDPAGMAAYSWSQALGAMGQKVCYRITIFASARPEKPTSWSTVSSTYYFAGNASGAGSPQHVSVKRLNQDSVSVDWTPSLLSACPGVLKEYIVRCHDEDSDQVFEVPVSELRDLSIFLASLGSFMSILLLGVFGYLGLNRVVRHLCPPLPTPCASTAVEFSDSQGKQVWQWTSPADFPEEVSPQEALVVNMSWDKGEGVDPDTPGPLKEKMELPLDAPEPALDMELPLEHRRQAQGHPEPGTLRSGWHGGLEGSPAQTAGLLLLLGDLRQTPRFGSQGERGTSASSYIEED", "length": 687, "header": "tr|A0A5G2QU21-1|F1S921_PIG Computationally mapped isoform of Interleukin-12 receptor subunit beta-1 OS=Sus scrofa OX=9823 GN=IL12RB1 PE=3 SV=1 CANONICAL=F1S921-1" }, "locus": { "chromosome": "2", "start_pos": 59735387, "end_pos": 59708067, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080689.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080689.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067654.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067654.1" } ] } }, { "isoform_ac": "F1S921-1", "url": "https://www.uniprot.org/uniprotkb/F1S921/entry#F1S921-1", "sequence": { "sequence": "MWQRVTRLVPLFLLLFPRQGAEACSTSRCCFQDPPYPDADSGSASGPRDLNCYRIFNRAGYECSWEYEGPTAGVSHFLRCCLKSGRCCYFATGSATTLQFSDQDGVDVLNAVTLWVESRAANKTEKSPMVTLNLYSSVKYDPPPGNIKVSRSAGQLHMEWETPTRQDGAEIQFRHRTPGSPWMLGDCGRQDDDAGFESCLCPLEMDMAQEFQLRRRRHQGPGVPGGPWSSWSSSVCIPPENPPQAKANFSVEQLRSDGRRQVTLNEQLPQLELPEGCLGNNSGVEMTYHVHLHMLSCPCKAKATRTLRLRKKLVLSGAAYDLALISRNRFGLGPNQTWHLPAYNHSGPGTLNISVGANRTTMHWPVLAQGLTYCIEWQPQGQDDSLVNCTLMTPKDQDPAGMAAYSWSQALGAMGQKVCYRITIFASARPEKPTSWSTVSSTYYFAGNASGAGSPQHVSVKRLNQDSVSVDWTPSLLSACPGVLKEYIVRCHDEDSDQVFELPVKPTETRVTLQGLRAGAAYMVQVRADTAKWQGSWSQPLRFSIEVPVSELRDLSIFLASLGSFMSILLLGVFGYLGLNRVVRHLCPPLPTPCASTAVEFSDSQGKQVWQWTSPADFPEEVSPQEALVVNMSWDKGEGVDPDTPGPLKEKMELPLDAPEPALDMELPLEHRRQAQGHPEPGTLRSGWHGGLEGSPAQTAGLLLLLGDLRQTPRFGSQGERGTSASSYIEED", "length": 732, "header": "tr|F1S921-1|F1S921_PIG Isoform 1 of Interleukin-12 receptor subunit beta-1 OS=Sus scrofa OX=9823 GN=IL12RB1 PE=3 SV=1 CANONICAL=F1S921-1" }, "locus": { "chromosome": "2", "start_pos": 59735387, "end_pos": 59708067, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015180.4", "url": "https://www.ensembl.org/id/ENSSSCT00000015180.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014774.1", "url": "https://www.ensembl.org/id/ENSSSCP00000014774.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 592, "start_aa": "Thr", "end_pos": 592, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr592", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 71, "start_aa": "Thr", "end_pos": 71, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr71", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QU21", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QU21" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9020591", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9020591", "resource": "Reactome", "description": "Interleukin-12 signaling" }, { "id": "R-SSC-9020933", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9020933", "resource": "Reactome", "description": "Interleukin-23 signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "E9PSU7-1", "protein_name": "Interleukin-12 receptor subunit beta-1", "gene_name": "Il12rb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDMTGLPGTSKHIIFLLLCQLSASSRGDSCCVEKISYPDEASGPSLGPRDLSCYRVSGTDYECSWQYDGPEDNVAHFLWCCFAHPNPTHTSFGQECCCYFSSGRSRTVQFWEQDGISTLSKVNFWVESRLGNRTLKSQEISQYLYNWTKLTPPLGHIRVSRSRGELRMDWNVSDGAGAEVQLRRRMPTTNWTLGDCGPQVSSGLGVIGDIHGSSSESCLCPSENMAQEIQIRRRRRLSSGAPGGPWSNWSMSVCVPPEFLPQAEIKFLVEPLNQDGRRRLTMEGQTPQLAVPEGCRDRPGAQVKKHLVLVHMLACRCQARTWKTVPLGKTLDLSGAAYDLDVLAQTRFGRSIIQKWPLPAQELTETRTLNVIVEGNVTSMQWAAQPPGTAYCLEWQPWGQDRNHTDCTLIAPEEEDPAKMVTHTWSSKPTLDQEECYRITVFASKNPKNPMMWATVLSSYYFGGNVSRVGTPRHVSVRNHTEDSVSVEWTASQLSTCPGVLTQYVVRCEAEDGTWESELLVPPTKTQVTLNSLRSRVVYKVQVRADTAMLPGSWSRPQRFSVEVQISRLSIVFASLGSFASVLLVGSLGYIGLNRAAWHLCPPLPTPCGSTAVEFPGSQDKQAWQWRNPEDFPEVLYPRDALVVEMPRDRDDETESPQATPERALDTRWPLGTEGQVQGLSEARLPDLAREDCPRGDLAHVTLPLLLGDVTQGASVLGDLWWIHKTVEPGPPTLGQEA", "length": 738 }, "evidence": [ { "id": "F1S921", "url": "https://omabrowser.org/oma/group/F1S921/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P42701-1", "protein_name": "Interleukin-12 receptor subunit beta-1", "gene_name": "IL12RB1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPLVTWVVPLLFLFLLSRQGAACRTSECCFQDPPYPDADSGSASGPRDLRCYRISSDRYECSWQYEGPTAGVSHFLRCCLSSGRCCYFAAGSATRLQFSDQAGVSVLYTVTLWVESWARNQTEKSPEVTLQLYNSVKYEPPLGDIKVSKLAGQLRMEWETPDNQVGAEVQFRHRTPSSPWKLGDCGPQDDDTESCLCPLEMNVAQEFQLRRRQLGSQGSSWSKWSSPVCVPPENPPQPQVRFSVEQLGQDGRRRLTLKEQPTQLELPEGCQGLAPGTEVTYRLQLHMLSCPCKAKATRTLHLGKMPYLSGAAYNVAVISSNQFGPGLNQTWHIPADTHTEPVALNISVGTNGTTMYWPARAQSMTYCIEWQPVGQDGGLATCSLTAPQDPDPAGMATYSWSRESGAMGQEKCYYITIFASAHPEKLTLWSTVLSTYHFGGNASAAGTPHHVSVKNHSLDSVSVDWAPSLLSTCPGVLKEYVVRCRDEDSKQVSEHPVQPTETQVTLSGLRAGVAYTVQVRADTAWLRGVWSQPQRFSIEVQVSDWLIFFASLGSFLSILLVGVLGYLGLNRAARHLCPPLPTPCASSAIEFPGGKETWQWINPVDFQEEASLQEALVVEMSWDKGERTEPLEKTELPEGAPELALDTELSLEDGDRCKAKM", "length": 662 }, "evidence": [ { "id": "F1S921", "url": "https://omabrowser.org/oma/group/F1S921/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q60837-1", "protein_name": "Interleukin-12 receptor subunit beta-1", "gene_name": "Il12rb1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDMMGLAGTSKHITFLLLCQLGASGPGDGCCVEKTSFPEGASGSPLGPRNLSCYRVSKTDYECSWQYDGPEDNVSHVLWCCFVPPNHTHTGQERCRYFSSGPDRTVQFWEQDGIPVLSKVNFWVESRLGNRTMKSQKISQYLYNWTKTTPPLGHIKVSQSHRQLRMDWNVSEEAGAEVQFRRRMPTTNWTLGDCGPQVNSGSGVLGDIRGSMSESCLCPSENMAQEIQIRRRRRLSSGAPGGPWSDWSMPVCVPPEVLPQAKIKFLVEPLNQGGRRRLTMQGQSPQLAVPEGCRGRPGAQVKKHLVLVRMLSCRCQAQTSKTVPLGKKLNLSGATYDLNVLAKTRFGRSTIQKWHLPAQELTETRALNVSVGGNMTSMQWAAQAPGTTYCLEWQPWFQHRNHTHCTLIVPEEEDPAKMVTHSWSSKPTLEQEECYRITVFASKNPKNPMLWATVLSSYYFGGNASRAGTPRHVSVRNQTGDSVSVEWTASQLSTCPGVLTQYVVRCEAEDGAWESEWLVPPTKTQVTLDGLRSRVMYKVQVRADTARLPGAWSHPQRFSFEVQISRLSIIFASLGSFASVLLVGSLGYIGLNRAAWHLCPPLPTPCGSTAVEFPGSQGKQAWQWCNPEDFPEVLYPRDALVVEMPGDRGDGTESPQAAPECALDTRRPLETQRQRQVQALSEARRLGLAREDCPRGDLAHVTLPLLLGGVTQGASVLDDLWRTHKTAEPGPPTLGQEA", "length": 738 }, "evidence": [ { "id": "F1S921", "url": "https://omabrowser.org/oma/group/F1S921/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 7, "go_terms": [ { "name": "interleukin-12 receptor binding", "id": "GO:0005143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005143", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "coreceptor activity", "id": "GO:0015026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015026", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "cytokine binding", "id": "GO:0019955", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019955", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "cytokine receptor activity", "id": "GO:0004896", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004896", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "interleukin-12 receptor activity", "id": "GO:0016517", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016517", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "interleukin-23 binding", "id": "GO:0042019", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042019", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "interleukin-23 receptor activity", "id": "GO:0042020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042020", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "positive regulation of cell population proliferation", "id": "GO:0008284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008284", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "positive regulation of defense response to virus by host", "id": "GO:0002230", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002230", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "positive regulation of type II interferon production", "id": "GO:0032729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032729", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "cellular response to type II interferon", "id": "GO:0071346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071346", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "positive regulation of activated T cell proliferation", "id": "GO:0042104", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042104", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "cytokine-mediated signaling pathway", "id": "GO:0019221", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019221", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" }, { "name": "positive regulation of T-helper 1 type immune response", "id": "GO:0002827", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002827", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": "https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "receptor complex", "id": "GO:0043235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043235", "evidence": [ { "database": "UniProtKB", "id": "F1S921", "url": 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"https://www.uniprot.org/uniprotkb/F1S921" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 122, "end_pos": 124, "annotation": "n_glycosylation_sequon" }, { "start_pos": 248, "end_pos": 250, "annotation": "n_glycosylation_sequon" }, { "start_pos": 280, "end_pos": 282, "annotation": "n_glycosylation_sequon" }, { "start_pos": 335, "end_pos": 337, "annotation": "n_glycosylation_sequon" }, { "start_pos": 344, "end_pos": 346, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" }, { "start_pos": 358, "end_pos": 360, "annotation": "n_glycosylation_sequon" }, { "start_pos": 388, "end_pos": 390, "annotation": "n_glycosylation_sequon" }, { "start_pos": 448, "end_pos": 450, "annotation": "n_glycosylation_sequon" }, { "start_pos": 631, "end_pos": 633, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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282 }, { "start_pos": 335, "end_pos": 337 }, { "start_pos": 344, "end_pos": 346 }, { "start_pos": 352, "end_pos": 354 }, { "start_pos": 358, "end_pos": 360 }, { "start_pos": 388, "end_pos": 390 }, { "start_pos": 448, "end_pos": 450 }, { "start_pos": 631, "end_pos": 633 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", 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Can hydrolyze leukotriene A4 (LTA-4) into leukotriene B4 (LTB-4).", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392#function" }, { "database": "UniProtKB", "id": "ARBA00058544", "url": "https://www.uniprot.org/uniprotkb/ARBA00058544#function" }, { "database": "UniProtKB", "id": "A0A287AM26", "url": "https://www.uniprot.org/uniprotkb/A0A287AM26#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RNPEP", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392", "locus": { "chromosome": "10", "start_pos": 24235518, "end_pos": 24218139, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000034151", "url": "https://www.ensembl.org/id/ENSSSCG00000034151" } ] } } ], "crossref": [ { "id": "A0A5G2R392", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R392", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000034151", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000034151", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd09599", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd09599", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524577", "url": "https://www.ncbi.nlm.nih.gov/gene/100524577", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001930", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001930", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014782", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014782", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": 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"Protein Classification" ] }, { "id": "IPR049980", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049980", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524577", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524577", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QLMDLDD", "url": "https://omabrowser.org/oma/group/QLMDLDD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AM26", "url": "https://www.orthodb.org/?gene=A0A287AM26", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45726", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45726", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45726:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45726:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01433", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01433", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09127", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09127", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17900", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17900", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AM26", "url": "https://www.uniprot.org/uniprotkb/A0A287AM26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AM26-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AM26-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNZ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNZ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNZ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R392-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGSGPGAGRRVLRSAQAEDVASASNFRAFELLHLHLDLRAEFGPPGPGPGSRGLSGSAVLELRCLEPGGAAELRLDSHPCLEVTAAVLRRGQPGPGQPEPEPEPVPVCTQPFSHYGQALCVRFPQPCSAGEHMQVQLTYRVGEGPGVCWLTPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCRYSALIEVPDGFTAVMSADTWEKRGPRKFFFQMSQPIPSYLIALAIGDLVSAEVGPRYDVLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISHSWFGNLVTNAHWGEFWLNEGFTMFAQRRISTILFGAAYTCLEAATGRALLRQHMDVTGEEHPLNKLRVKIEPGVDPDDTYNETPYEKGFCFVSYLAHLVGDQDQFDRFLRAYVEEFKFQSILADDFLEFFLDYFPELKRRKVDSIPGLEFDRWLNTPGWPPFLPDLSPGDALMKPADELAELWATEALDMRAIGAVSTSAWKTYQLVYFLDRILQKSPLPPGNVKKLGETYPKISNAQNAELRLRWGQIVLKNDHQEDFWKVKEFLCSQGKQKYTLPLYHAMMGGSEAARALAKETFAATASQLHSNVVHYVQQIVEPLGS", "length": 609, "header": "tr|A0A5G2R392-1|A0A5G2R392_PIG Isoform 1 of Aminopeptidase B OS=Sus scrofa OX=9823 GN=RNPEP PE=1 SV=1 CANONICAL=A0A5G2R392-1" }, "isoforms": [ { "isoform_ac": "A0A287AM26-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392/entry#A0A287AM26-1", "sequence": { "sequence": "MAGSGPGAGRRVLRSAQAEDVASASNFRAFELLHLHLDLRAEFGPPGPGPGSRGLSGSAVLELRCLEPGGAAELRLDSHPCLEVTAAVLRRGQPGPGQPEPEPEPVPVCTQPFSHYGQALCVRFPQPCSAGEHMQVQLTYRVGEGPGVCWLTPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCRYSALIEVPDGFTAVMSADTWEKRGPRKFFFQMSQPIPSYLIALAIGDLVSAEVGPRSRVWAEPCLIDAAKEEYDGVIEEFLATGEKLFGPYVWGRYDVLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISHSWFGNLVTNAHWGEFWLNEGFTMFAQRRISTILFGAAYTCLEAATGRALLRQHMDVTGEEHPLNKLRVKIEPGVDPDDTYNETPYEKGFCFVSYLAHLVGDQDQFDRFLRAYVEEFKFQSILADDFLEFFLDYFPELKRRKVDSIPGLEFDRWLNTPGWPPFLPDLSPGDALMKPADELAELWATEALDMRAIGAVSTSAWKTYQLVYFLDRILQKSPLPPGNVKKLGETYPKISNAQNAELRLRWGQIVLKNDHQEDFWKVKEFLCSQGKQKYTLPLYHAMMGGSEAARALAKETFAATASQLHSNVVHYVQQIVEPLGS", "length": 648, "header": "tr|A0A287AM26-1|A0A287AM26_PIG Computationally mapped isoform of Aminopeptidase B OS=Sus scrofa OX=9823 GN=RNPEP PE=1 SV=1 CANONICAL=A0A5G2R392-1" }, "locus": { "chromosome": "10", "start_pos": 24235147, "end_pos": 24218347, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041095.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041095.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044965.1", "url": "https://www.ensembl.org/id/ENSSSCP00000044965.1" } ] } }, { "isoform_ac": "A0A5G2QNZ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392/entry#A0A5G2QNZ0-1", "sequence": { "sequence": "MAGSGPGAGRRVLRSAQAEDVASASNFRAFELLHLHLDLRAEFGPPGPGPGSRGLSGSAVLELRCLEPGGAAELRLDSHPCLEVTAAVLRRGQPGPGQPEPEPEPVPVCTQPFSHYGQALCVRFPQPCSAGEHMQVQLTYRVGEGPGVCWLTPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCRYSALIEVPDGFTAVMSADTWEKRGPRKFFFQMSQPIPSYLIALAIGDLVSAEVGPRSRVWAEPCLIDAAKEEYDGVIEEFLATGEKLFGPYVWGRYDVLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISHSWFGNLVTNAHWGEFWLNEGFTMFAQRRISTILFGAAYTCLEAATGRALLRQHMDVTGEEHPLNKLRVKIEPGVDPDDTYNETPYEKGFCFVSYLAHLVGDQDQFDRFLRAYVEEFKFQSILADDFLEFFLDYFPELKRRKVDSIPGLEFDRWLNTPGWPPFLPDLSPGDALMKPADELAELWATEALDMRAIGAVSTSAWKTYQLVYFLDRILQKSPLPPGNVKKLGETYPKISNAQNAELRLRWGQIVLKNDHQEDFWKVKEFLCSQVGNPPPHRIWMGSSGPAASGVGRGRRG", "length": 623, "header": "tr|A0A5G2QNZ0-1|A0A5G2QNZ0_PIG Computationally mapped isoform of Arginyl aminopeptidase OS=Sus scrofa OX=9823 GN=RNPEP PE=1 SV=1 CANONICAL=A0A5G2R392-1" }, "locus": { "chromosome": "10", "start_pos": 24234231, "end_pos": 24218347, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087346.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087346.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066608.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066608.1" } ] } }, { "isoform_ac": "A0A5G2R392-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392/entry#A0A5G2R392-1", "sequence": { "sequence": "MAGSGPGAGRRVLRSAQAEDVASASNFRAFELLHLHLDLRAEFGPPGPGPGSRGLSGSAVLELRCLEPGGAAELRLDSHPCLEVTAAVLRRGQPGPGQPEPEPEPVPVCTQPFSHYGQALCVRFPQPCSAGEHMQVQLTYRVGEGPGVCWLTPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCRYSALIEVPDGFTAVMSADTWEKRGPRKFFFQMSQPIPSYLIALAIGDLVSAEVGPRYDVLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISHSWFGNLVTNAHWGEFWLNEGFTMFAQRRISTILFGAAYTCLEAATGRALLRQHMDVTGEEHPLNKLRVKIEPGVDPDDTYNETPYEKGFCFVSYLAHLVGDQDQFDRFLRAYVEEFKFQSILADDFLEFFLDYFPELKRRKVDSIPGLEFDRWLNTPGWPPFLPDLSPGDALMKPADELAELWATEALDMRAIGAVSTSAWKTYQLVYFLDRILQKSPLPPGNVKKLGETYPKISNAQNAELRLRWGQIVLKNDHQEDFWKVKEFLCSQGKQKYTLPLYHAMMGGSEAARALAKETFAATASQLHSNVVHYVQQIVEPLGS", "length": 609, "header": "tr|A0A5G2R392-1|A0A5G2R392_PIG Isoform 1 of Aminopeptidase B OS=Sus scrofa OX=9823 GN=RNPEP PE=1 SV=1 CANONICAL=A0A5G2R392-1" }, "locus": { "chromosome": "10", "start_pos": 24235147, "end_pos": 24218347, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089720.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089720.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071560.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071560.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524577", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524577", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A0A4-1", "protein_name": "Aminopeptidase B", "gene_name": "RNPEP", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAVGAARDAATATGGSAAPFALRHLHLSLRVGFAAAGAGRLRGAARLELRCVRSGSREVVLDAHPALSVLGARLLPPGGAGEREGEGEGQELRFESRPFASYGTALHLALPEEPRPGELLVVRIDYETGEGPGVCWLTPEQTAGKQKPYMYTQGQAVLNRSFFPGFDTPAVKCTYSATVQVPEGFTAVMSATTWEKQKDNTFVFKMEHPIPSYLIALAVGDIVSAEVGPRSRVWAEPCLIEAAKKEYDGVIEEFLAVGEKLFGPYVWGRYDVLFMPPSFPFGGMENPCITFVTPCLLAGDRSLVDVIIHEISHSWFGNLVTNATWGEFWLNEGFTMYAQRRISTEVYGSAYTCLEAATGRALLRQHMDTTGEEHPLNKLRVVIEPGVNPDDTYNETPYEKGFCFVSYLAHLVGDQGKFDAFLQAYVEQFKFQSITADDALGFFLEYFPDLKQQGVESRPGLEFDRWLNTPGWPPFLPDLSPGQQLMKPADELAELWAADGLNMEEIEAVDISAWKTYQMVYFLDRILQKSPLPEGNVERLSAMYPKVSKAQNAELRLRWCQIVLRNNHEPEYSKVKAFLHSQGKQKYTLPLYRAMWGGSEAARALAMETFSATAPQLHINVRNYVKKILGLEGSD", "length": 636 }, "evidence": [ { "id": "A0A5G2R392", "url": "https://omabrowser.org/oma/group/A0A5G2R392/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O09175-1", "protein_name": "Aminopeptidase B", "gene_name": "Rnpep", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESSGPSSCHSAARRPLHSAQAVDVASASSFRAFEILHLHLDLRAEFGPPGPGPGSRGLNGKATLELRCLLPEGASELRLDSHSCLEVMAATLLRGQPGDQQQLTEPVPFHTQPFSHYGQALCVVFPKPCCAAERFRLELTYRVGEGPGVCWLAPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCTYSALVEVPDGFTAVMSASTWERRGPNKFFFQMSQPIPSYLIALAIGDLASAEVGPRSRVWAEPCLIEAAKEEYNGVIEEFLATGEKLFGPYVWGRYDLLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISHSWFGNLVTNANWGEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMDVSGEENPLNKLRVKIEPGVDPDDTYNETPYEKGYCFVSYLAHLVGDQEQFDKFLKAYVDEFKFQSILAEDFLEFYLEYFPELKKKGVDSIPGFEFNRWLNTPGWPPYLPDLSPGDSLMKPAEELAELWAASEPDMQAIEAVAISTWKTYQLVYFLDKILQKSPLPPGNVKKLGETYPKISNAQNAELRLRWGQIILKNDHQEEFWKVKDFLQSQGKQKYTLPLYHAMMGGSEMARTLAKETFSATASQLHSNVVNYVQQILAPKGS", "length": 650 }, "evidence": [ { "id": "A0A5G2R392", "url": "https://omabrowser.org/oma/group/A0A5G2R392/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8VCT3-1", "protein_name": "Aminopeptidase B", "gene_name": "Rnpep", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESGGPGNYSAAARRPLHSAQAVDVASASSFRAFEILHLHLDLRAEFGPPGPGPGSRGLSGTATLELRCLLPEGASELRLDSHSCLEVTAATLRRGQPGDQQAPAEPVPFHTQPFSHYGQALCVAFRQPCGAADRFELELTYRVGEGPGVCWLAPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKCTYSALIEVPDGFTAVMSADTWEKRGPNKFFFQMSHPIPSYLIALAIGDLASAEVGPRSRVWAEPCLIEAAKEEYSGVIEEFLATGEKLFGPYVWGRYDLLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISHSWFGNLVTNANWGEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMNVSGEENPLNKLRVKIEPGVDPDDTYNETPYEKGYCFVSYLAHLVGDQDQFDKFLKAYVDEFKFQSILAEDFLEFYLEYFPELKKKGVDSIPGFEFDRWLNTPGWPPYLPDLSPGDSLMKPAEELAELWVTSEPDMQAIEAVAISTWKTYQLVYFLDKILQKSPLPPGNVKKLGETYPKISNAQNAELRLRWGQIILKNDYQEEFQKVKDFLQSQGKQKYTLPLYHAMMGGSEMARTLAKDTFAATASQLHSNVVNYVQQILAPKDS", "length": 650 }, "evidence": [ { "id": "A0A5G2R392", "url": "https://omabrowser.org/oma/group/A0A5G2R392/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H4A4-1", "protein_name": "Aminopeptidase B", "gene_name": "RNPEP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASGEHSPGSGAARRPLHSAQAVDVASASNFRAFELLHLHLDLRAEFGPPGPGAGSRGLSGTAVLDLRCLEPEGAAELRLDSHPCLEVTAAALRRERPGSEEPPAEPVSFYTQPFSHYGQALCVSFPQPCRAAERLQVLLTYRVGEGPGVCWLAPEQTAGKKKPFVYTQGQAVLNRAFFPCFDTPAVKYKYSALIEVPDGFTAVMSASTWEKRGPNKFFFQMCQPIPSYLIALAIGDLVSAEVGPRSRVWAEPCLIDAAKEEYNGVIEEFLATGEKLFGPYVWGRYDLLFMPPSFPFGGMENPCLTFVTPCLLAGDRSLADVIIHEISHSWFGNLVTNANWGEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMDITGEENPLNKLRVKIEPGVDPDDTYNETPYEKGFCFVSYLAHLVGDQDQFDSFLKAYVHEFKFRSILADDFLDFYLEYFPELKKKRVDIIPGFEFDRWLNTPGWPPYLPDLSPGDSLMKPAEELAQLWAAEELDMKAIEAVAISPWKTYQLVYFLDKILQKSPLPPGNVKKLGDTYPSISNARNAELRLRWGQIVLKNDHQEDFWKVKEFLHNQGKQKYTLPLYHAMMGGSEVAQTLAKETFASTASQLHSNVVNYVQQIVAPKGS", "length": 650 }, "evidence": [ { "id": "A0A5G2R392", "url": "https://omabrowser.org/oma/group/A0A5G2R392/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "pmid": "" }, { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "pmid": "" }, { "name": "metalloaminopeptidase activity", "id": "GO:0070006", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070006", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "pmid": "" }, { "name": "metallopeptidase activity", "id": "GO:0008237", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008237", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R392", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 369, "end_pos": 371, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], 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} ], "binding_site_uniprot": 288, "amino_acid": "His", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 288, "end_pos": 288, "start_aa": "His", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A5G2R392", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392#function" }, { "id": "A0A5G2R392", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R392" }, { "id": "PIRSR634015-3", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR634015-3" } ], "binding_site_uniprot": 307, "amino_acid": "Glu", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 307, "end_pos": 307, "start_aa": "Glu", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "A0A287AM26", "database": 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May coordinate nutritional and hormonal anabolic signals through the sensing of extracellular amino acids, osteocalcin, divalent ions and its responsiveness to anabolic steroids.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0Q1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1#function" }, { "database": "UniProtKB", "id": "ARBA00058880", "url": "https://www.uniprot.org/uniprotkb/ARBA00058880#function" }, { "database": "UniProtKB", "id": "A0A287AY40", "url": "https://www.uniprot.org/uniprotkb/A0A287AY40#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0Q1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GPRC6A", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1", "locus": { 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Classification" ] }, { "id": "IPR028082", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028082", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038550", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038550", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152099", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152099", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ASPHTCC", "url": "https://omabrowser.org/oma/group/ASPHTCC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AY40", "url": "https://www.orthodb.org/?gene=A0A287AY40", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24061", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24061", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24061:SF5", "url": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AY40-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AY40-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0Q1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0Q1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALLIILITCFVIIFATRQPCQAPDDFMAASSPGHIIIGGLFAIHEKMLSSEDYPRRPEIQKCVGFEISNFLQTLAMIHSIEMINNSTLLSGVKLGYEIYDTCTDVTVAMAAALRFLSKFNSSGEIVEFKCDYSSYTPRVKAVIGAGYSEITMAVSRMLNLQLIPQVSYESTAETLSDKIRFPSFLRTVPSDFYQTKAMAQLIRKSGWNWIGIITTDDDYGRLALNTFTIQAVANNVCIAFKEVLPAFLSDNTIEVRINQALEKIIAEAQVNVIVVFLSQFHVFNLFSKAIERNINKIWIASDNWSTATKITTIPNVKRIGKVVGFTFRRGNMSSFHSFLQNLHMFPSDNNKPLNEYAMLLAACADAKDSDLSQCISNYSQGTLAYKANKDIERNFSLRNDFLWDYTEPGFVHSIQLAVFALGYAIRDLCQARDCQNPNAFQPWEQIQSKCSKECLPGQMKKITKSQHICCYECANCPENHYSNQTDMDHCLLCNNETHWAPVRSTMCFEKEVEYLNWNDSLAILLLALSLLGIVFVLAIGIIFTRNLNTPVVKSSGGLTVCYVILFCHFLNFASTGFFIGEPQNFTCKTRQMLFGVSFTLCISCILMKSLKILLAFSFDPKLQKFLKCLYKPIPIVFTCTGIQVVICTLWLIFAAPAVEENVSLPRVIILECEEGSILAFGTMLGYIAILAFICFIFAFKGRKLPENYNEAKFITFGMLIYFIAWITFIPIYTTTFGKYLPAVEIIVILISNYGILCCTFFPKCYVILCKQDTNTKSAFLKMIYSYSSHCASSLAVSHVSLDTTNSNVTTTSRSSAGKSAAWQKREDFQAQAFACVCRENATYVSNALPRKRTSSI", "length": 857, "header": "tr|A0A5G2R0Q1-1|A0A5G2R0Q1_PIG Isoform 1 of G-protein coupled receptor family C group 6 member A OS=Sus scrofa OX=9823 GN=GPRC6A PE=3 SV=1 CANONICAL=A0A5G2R0Q1-1" }, "isoforms": [ { "isoform_ac": "A0A287AY40-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1/entry#A0A287AY40-1", "sequence": { "sequence": "MALLIILITCFVIIFATRQPCQAPDDFMAASSPGHIIIGGLFAIHEKMLSSEDYPRRPEIQKCVGFEISNFLQTLAMIHSIEMINNSTLLSGVKLGYEIYDTCTDVTVAMAAALRFLSKFNSSGEIVEFKCDYSSYTPRVKAVIGAGYSEITMAVSRMLNLQLIPQVSYESTAETLSDKIRFPSFLRTVPSDFYQTKAMAQLIRKSGWNWIGIITTDDDYGRLALNTFTIQAVANNVCIAFKEVLPAFLSDNTIEVRINQALEKIIAEAQVNVIVVFLSQFHVFNLFSKAIERNINKIWIASDNWSTATKITTIPNVKRIGKVVGFTFRRGNMSSFHSFLQNLHMFPSDNNKPLNEYAMLLAACADAKDSDLSQCISNYSQGTLAYKANKDIERNFSLRNDFLWDYTEPGFVHSIQLAVFALGYAIRDLCQARDCQNPNAFQPWELLHVLKNVTFMDGGSSFHFDAHGDMNTGYDVVLWKEIDGHMTITKLAQYDLKNDVFIVTDQETRNEFRNLKQIQSKCSKECLPGQMKKITKSQHICCYECANCPENHYSNQTDMDHCLLCNNETHWAPVRSTMCFEKEVEYLNWNDSLAILLLALSLLGIVFVLAIGIIFTRNLNTPVVKSSGGLTVCYVILFCHFLNFASTGFFIGEPQNFTCKTRQMLFGVSFTLCISCILMKSLKILLAFSFDPKLQKFLKCLYKPIPIVFTCTGIQVVICTLWLIFAAPAVEENVSLPRVIILECEEGSILAFGTMLGYIAILAFICFIFAFKGRKLPENYNEAKFITFGMLIYFIAWITFIPIYTTTFGKYLPAVEIIVILISNYGILCCTFFPKCYVILCKQDTNTKSAFLKMIYSYSSHCASSLAVSHVSLDTTNSNVTTTSRSSAGKSAAWQKREDFQAQAFACVCRENATYVSNALPRKRTSSI", "length": 928, "header": "tr|A0A287AY40-1|A0A287AY40_PIG Computationally mapped isoform of G-protein coupled receptor family C group 6 member A OS=Sus scrofa OX=9823 GN=GPRC6A PE=3 SV=1 CANONICAL=A0A5G2R0Q1-1" }, "locus": { "chromosome": "1", "start_pos": 44873773, "end_pos": 44854603, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091987.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091987.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080008.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080008.1" } ] } }, { "isoform_ac": "A0A5G2R0Q1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1/entry#A0A5G2R0Q1-1", "sequence": { "sequence": "MALLIILITCFVIIFATRQPCQAPDDFMAASSPGHIIIGGLFAIHEKMLSSEDYPRRPEIQKCVGFEISNFLQTLAMIHSIEMINNSTLLSGVKLGYEIYDTCTDVTVAMAAALRFLSKFNSSGEIVEFKCDYSSYTPRVKAVIGAGYSEITMAVSRMLNLQLIPQVSYESTAETLSDKIRFPSFLRTVPSDFYQTKAMAQLIRKSGWNWIGIITTDDDYGRLALNTFTIQAVANNVCIAFKEVLPAFLSDNTIEVRINQALEKIIAEAQVNVIVVFLSQFHVFNLFSKAIERNINKIWIASDNWSTATKITTIPNVKRIGKVVGFTFRRGNMSSFHSFLQNLHMFPSDNNKPLNEYAMLLAACADAKDSDLSQCISNYSQGTLAYKANKDIERNFSLRNDFLWDYTEPGFVHSIQLAVFALGYAIRDLCQARDCQNPNAFQPWEQIQSKCSKECLPGQMKKITKSQHICCYECANCPENHYSNQTDMDHCLLCNNETHWAPVRSTMCFEKEVEYLNWNDSLAILLLALSLLGIVFVLAIGIIFTRNLNTPVVKSSGGLTVCYVILFCHFLNFASTGFFIGEPQNFTCKTRQMLFGVSFTLCISCILMKSLKILLAFSFDPKLQKFLKCLYKPIPIVFTCTGIQVVICTLWLIFAAPAVEENVSLPRVIILECEEGSILAFGTMLGYIAILAFICFIFAFKGRKLPENYNEAKFITFGMLIYFIAWITFIPIYTTTFGKYLPAVEIIVILISNYGILCCTFFPKCYVILCKQDTNTKSAFLKMIYSYSSHCASSLAVSHVSLDTTNSNVTTTSRSSAGKSAAWQKREDFQAQAFACVCRENATYVSNALPRKRTSSI", "length": 857, "header": "tr|A0A5G2R0Q1-1|A0A5G2R0Q1_PIG Isoform 1 of G-protein coupled receptor family C group 6 member A OS=Sus scrofa OX=9823 GN=GPRC6A PE=3 SV=1 CANONICAL=A0A5G2R0Q1-1" }, "locus": { "chromosome": "1", "start_pos": 44873773, "end_pos": 44854603, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105293.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105293.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076210.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076210.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0Q1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0Q1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152099", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152099", "resource": "KEGG Pathway" }, { "id": "R-SSC-416476", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416476", "resource": "Reactome", "description": "G alpha (q) signalling events" }, { "id": "R-SSC-420499", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-420499", "resource": "Reactome", "description": "Class C/3 (Metabotropic glutamate/pheromone receptors)" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YR16-1", "protein_name": "G-protein coupled receptor family C group 6 member A", "gene_name": "GPRC6A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALFSLVLIPFVISSDAASACQNTDDFVGASSPGDIIIGGLFAVHSEMLQPEEHPIKPVIQNCAGFEIQIFLQTLAMIHAIEMINNSTLLSGVTLGYEIYDTCAEVTKAMASALRFLSKSNTSKDIVEFKCNYSDYVPRIKAVTGASYSEVSMAVSRLLALQLIPQVSPASSAEILSDKIRFPSFLRTIPSDFHQTRAMAHLICESGWNWIGVIATDDDNGRFALESFGIQAMANSVCIAFKEMLPAYLSDNTFHTKVDRAVEKIVKETRVNVIVVFMRQFHVLKLFKKAIERNVKKIWIASDNWSTAVKISTMPNIRKLGTVVGFGFKNKDLSTFQDFLRNLHDRPTENNKFLLEYIMLLSVCAHLDNYDFQMCISSQSQYDLMQNVENNHQIWRDDFLNANIEPGFIHSTILAVYAIAHAIKGQCKDRNCKNPSAFAPWELLEELKKVIIIDDDKEIKFDSKGDLSSGYDVLLWKEVDGRMEITTMAEYDPENGYFIFEDEEKKKEFLDLKKVPSTCSQHCRPGQMKKVTESPHTCCYECVYCPENHYSNQTDMDYCYRCHNKTYWAPVNSTTCYRKTIHFLGWTDWFAIFLLLLSAFGVVLIFSISAIFTKNLSTPVVKASGGLTVCYIILLSHFFIFLSTVFFIGEPTEFKCRTRQALFGISFALCISCILIKSLKILLAFSFDPKLQNFLKCAYKPITIVFICTGIQVIICTFWLIFRTPFVKQNFSIPRAIILECNEGSVVAFGIMLGYIAALAFICFICAFKGRKLPENYNEAKFITFGMLIYFIAWIVFIPVYVTTFGKYLPAVEIIVILISNYGILCCTFFPKCYIIIYKQETNTKSAFLKMIYTYSSKSVGSIAVSQISLDSKSSSSRITESDSCNAEKSSVNGNCHFQVSGQTPVKEKAVPKRATRTLSRKRLSSI", "length": 927 }, "evidence": [ { "id": "A0A5G2R0Q1", "url": "https://omabrowser.org/oma/group/A0A5G2R0Q1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3I570-1", "protein_name": "G-protein coupled receptor family C group 6 member A", "gene_name": "Gprc6a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": 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"A0A5G2R354", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R354", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000031963", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000031963", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR033336", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033336", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR31516", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31516", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31516:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31516:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05217", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05217", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B999", "url": "https://www.uniprot.org/uniprotkb/A0A287B999", "database": 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scrofa OX=9823 GN=SAXO2 PE=3 SV=1 CANONICAL=A0A5G2R354-1" }, "isoforms": [ { "isoform_ac": "A0A287B999-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354/entry#A0A287B999-1", "sequence": { "sequence": "LALSMRSWCLCQICTCGRHHCPHGTTKIYENSGVSCPTTEYLEKYPMYGNVLPPQSLKPKEEVRAYRGKMEGITTFKSDYRPYEIVKQPRHAPEEYKPKQGEIDLGTTYKRDFNSYKVQPVAIVRPLERQQVKKGKLDTVPTYKDDYRVWDIQKSEFYKPEQTYYPPTVKFGNSTTFQDDYVPQEIKPRQSCKPSSAVKRSTAPFNGATSHRLDYVPHQLEFKFARPKEVYKPTHQPFEDLTTHRYDFQGLVGEAAKICRPAYNRVAQNAHFEGSTEFRESFQPWEIPPPEAKKVPEYVPPTGAMQCDSTSHLDYIPHQAKRVVPIRPVSHRRNNNFPFQGKSTTKEDFPAWEICRQELIKKQQQIPNPSGKFDGLSTFRSHYVPHALIPTESCKPLNVPFKSSSPFDDVTLYSTEYTPKKQEICPASYPSPPGYIFENTNSRGHKFFRKVTTPTVKAF", "length": 459, "header": "tr|A0A287B999-1|A0A287B999_PIG Computationally mapped isoform of Stabilizer of axonemal microtubules 2 OS=Sus scrofa OX=9823 GN=SAXO2 PE=3 SV=2 CANONICAL=A0A5G2R354-1" }, "locus": { "chromosome": "7", "start_pos": 50998117, "end_pos": 50977168, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040005.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040005.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052653.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052653.2" } ] } }, { "isoform_ac": "A0A5G2R354-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354/entry#A0A5G2R354-1", "sequence": { "sequence": "LALSMRSWCLCQICTCGSDYRPYEIVKQPRHAPEEYKPKQGEIDLGTTYKRDFNSYKVQPVAIVRPLERQQVKKGKLDTVPTYKDDYRVWDIQKSEFYKPEQTYYPPTVKFGNSTTFQDDYVPQEIKPRQSCKPSSAVKRSTAPFNGATSHRLDYVPHQLEFKFARPKEVYKPTHQPFEDLTTHRYDFQGLVGEAAKICRPAYNRVAQNAHFEGSTEFRESFQPWEIPPPEAKKVPEYVPPTGAMQCDSTSHLDYIPHQAKRVVPIRPVSHRRNNNFPFQGKSTTKEDFPAWEICRQELIKKQQQIPNPSGKFDGLSTFRSHYVPHALIPTESCKPLNVPFKSSSPFDDVTLYSTEYTPKKQEICPASYPSPPGYIFENTNSRGHKFFRKVTTPTVKAF", "length": 399, "header": "tr|A0A5G2R354-1|A0A5G2R354_PIG Isoform 1 of Stabilizer of axonemal microtubules 2 OS=Sus scrofa OX=9823 GN=SAXO2 PE=3 SV=1 CANONICAL=A0A5G2R354-1" }, "locus": { "chromosome": "7", "start_pos": 50998117, "end_pos": 50977168, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083515.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083515.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064984.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064984.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "pmid": "" }, { "name": "sperm flagellum", "id": "GO:0036126", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036126", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "pmid": "" }, { "name": "axonemal microtubule", "id": "GO:0005879", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005879", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R354", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R354" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 113, "end_pos": 115, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2R354-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 399, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2R354-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2R354" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 113, "end_pos": 115 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R2I4-1", "uniprot_ac": "A0A5G2R2I4", "uniprot_id": "A0A5G2R2I4_PIG", "mass": { "chemical_mass": 48595.0, "monoisotopic_mass": 48595.0 }, "refseq": {}, "gene_names": [ { "name": "AGFG2", "type": "recommended", "evidence": [ { "id": "A0A5G2R2I4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ] } ], "protein_names": [ { "name": "ArfGAP with FG repeats 2", "type": "synonym", "evidence": [ { "id": "A0A5G2R2I4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AGFG2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4", "locus": { "chromosome": "3", "start_pos": 8490831, "end_pos": 8468044, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007664", "url": "https://www.ensembl.org/id/ENSSSCG00000007664" } ] } } ], "crossref": [ { "id": "A0A5G2R2I4", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R2I4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007664", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007664", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17903", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17903", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100514569", "url": "https://www.ncbi.nlm.nih.gov/gene/100514569", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037278", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037278", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038508", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038508", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052248", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052248", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514569", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514569", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DVFGDIW", "url": "https://omabrowser.org/oma/group/DVFGDIW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287ABA8", "url": "https://www.orthodb.org/?gene=A0A287ABA8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46134", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46134", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46134:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46134:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01412", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01412", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287ABA8", "url": "https://www.uniprot.org/uniprotkb/A0A287ABA8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ABA8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ABA8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2I4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCI4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCI4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCI4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVMAAKKGPGPGGGVGGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTSLIPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPEYTKGSASTPVQGSIPEGKPLRTLLGDPVPSLSAAASTSSQAVSQSQPRTSQPRSSQPAPHSSVKKASTDLLADIGGDPFAAPQVAPAFAAFPAFGGQTPSHGGFANFDAFGSSASSSAFGSIPPAGQAPFPAQPVPPGSSQATPFGASPLAPAGQPNNLGDMGSLLGPGASAGGIPNSVFGIASQVPTLQSAPTGGGSSTGLAFGAFNPFTAPAAHPQLPSTNPFQPNGLATGPGFGMSSAGPGFPQTVPPAAGAFSSPFPPALFPAQPSGPQQPDGSSFGDLGPAKLGQRPLSQPAGISTNPFMTGSSSSPFASKPPTTNPFL", "length": 479, "header": "tr|A0A5G2R2I4-1|A0A5G2R2I4_PIG Isoform 1 of ArfGAP with FG repeats 2 OS=Sus scrofa OX=9823 GN=AGFG2 PE=1 SV=2 CANONICAL=A0A5G2R2I4-1" }, "isoforms": [ { "isoform_ac": "A0A287ABA8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4/entry#A0A287ABA8-1", "sequence": { "sequence": "MVMAAKKGPGPGGGVGGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTSLIPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPEYTKGSASTPVQGSIPEGKPLRTLLGDPVPSLSAAASTSSQAVSQSQPRTSQPRSSQPAPHSSVKKASTDLLADIGGDPFAAPQVAPAFAAFPAFGGQTPSHGGFANFDAFGSSASSSAFGSIPPAGQAPFPAQPVPPASRMLAGSYSFGSSQATPFGASPLAPAGQPNNLGDMGSLLGPGASAGGIPNSVFGIASQVPTLQSAPTGGGSSTGLAFGAFNPFTAPAAHPQLPSTNPFQPNGLATGPGFGMSSAGPGFPQTVPPAAGAFSSPFPPALFPAQPSGPQQPDGSSFGDLGPAKLGQRPLSQPAGISTNPFMTGSSSSPFASKPPTTNPFL", "length": 490, "header": "tr|A0A287ABA8-1|A0A287ABA8_PIG Computationally mapped isoform of ArfGAP with FG repeats 2 OS=Sus scrofa OX=9823 GN=AGFG2 PE=1 SV=2 CANONICAL=A0A5G2R2I4-1" }, "locus": { "chromosome": "3", "start_pos": 8489852, "end_pos": 8468384, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064137.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064137.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041257.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041257.2" } ] } }, { "isoform_ac": "A0A5G2R2I4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4/entry#A0A5G2R2I4-1", "sequence": { "sequence": "MVMAAKKGPGPGGGVGGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTSLIPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPEYTKGSASTPVQGSIPEGKPLRTLLGDPVPSLSAAASTSSQAVSQSQPRTSQPRSSQPAPHSSVKKASTDLLADIGGDPFAAPQVAPAFAAFPAFGGQTPSHGGFANFDAFGSSASSSAFGSIPPAGQAPFPAQPVPPGSSQATPFGASPLAPAGQPNNLGDMGSLLGPGASAGGIPNSVFGIASQVPTLQSAPTGGGSSTGLAFGAFNPFTAPAAHPQLPSTNPFQPNGLATGPGFGMSSAGPGFPQTVPPAAGAFSSPFPPALFPAQPSGPQQPDGSSFGDLGPAKLGQRPLSQPAGISTNPFMTGSSSSPFASKPPTTNPFL", "length": 479, "header": "tr|A0A5G2R2I4-1|A0A5G2R2I4_PIG Isoform 1 of ArfGAP with FG repeats 2 OS=Sus scrofa OX=9823 GN=AGFG2 PE=1 SV=2 CANONICAL=A0A5G2R2I4-1" }, "locus": { "chromosome": "3", "start_pos": 8489852, "end_pos": 8468384, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078554.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078554.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071401.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071401.2" } ] } }, { "isoform_ac": "A0A8W4FCI4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4/entry#A0A8W4FCI4-1", "sequence": { "sequence": "MVMAAKKGPGPGGGVGGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTSLIPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPEYTKGSASTPVQGSIPEGKPLRTLLGDPVPSLSAAASTSSQAVSQSQPRTSQPRSSQPAPHSSVKKASTDLLADIGGDPFAAPQVAPAFAAFPAFGGQTPSHGGFANFDAFGSSASSSAFGSIPPAGQAPFPAQPVPPASRMLAGSYSFGSSQATPFGASPLAPAGQPNNLGDMGSLLGPGASAGGIPNSLQPLHGTCCSPPAAFHQPVPAQWFGHRTRLRDEQCGTWLPPDSAPRRRGLFQPLPTRALPRPALRAAATGRLFLRRPGTRQAGAEAPEPAGRDLHQPLHDWILIKPICLQTSDHQPLLVALCPGGACSLGPSSPWSSDDH", "length": 484, "header": "tr|A0A8W4FCI4-1|A0A8W4FCI4_PIG Computationally mapped isoform of ArfGAP with FG repeats 2 OS=Sus scrofa OX=9823 GN=AGFG2 PE=1 SV=1 CANONICAL=A0A5G2R2I4-1" }, "locus": { "chromosome": "3", "start_pos": 8489917, "end_pos": 8468384, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097743.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097743.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076013.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076013.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514569", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514569", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6GAX8-1", "protein_name": "ArfGAP with FG repeats 2", "gene_name": "Agfg2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVMAAKKGPGPGGGVAGSKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLCMWIPHHTHCIPAQGSLTAIYTPDIVPLLSLQVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPEQVKGASYSKGSVSATPVQGSVPEGKPIRTLLGDPVPSLSDAASTSSQSVSQSQARTAQARSSQPPSHSSTKKASTDLLADIGGDPFAAPQVAPAFASFPGFGGQNPSHGGFANFDAFSSSPSSSAFGSLPPSVQTPFQAQPTPPSLLVLSYPGSSQMSAFGVAPLAAASQPNSLADVGGLLEPRMAAGGLPGSVFGMPSQVPALQSAVPGVGGSTGLPFGAFTNPFTTPAQPQLPSTNPFQPNGIASGPGYGMGSVQPGLLQPAPPSGAFASTFPAPVFPTQAGLVEQQNGSSFGDLGTSKLGQRPLSQPAGISTNPFMTGSSAFASKPPTTNPFL", "length": 486 }, "evidence": [ { "id": "A0A5G2R2I4", "url": "https://omabrowser.org/oma/group/A0A5G2R2I4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O95081-1", "protein_name": "Arf-GAP domain and FG repeat-containing protein 2", "gene_name": "AGFG2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVMAAKKGPGPGGGVSGGKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVVFLQSRGNEVCRKIWLGLFDARTSLVPDSRDPQKVKEFLQEKYEKKRWYVPPDQVKGPTYTKGSASTPVQGSIPEGKPLRTLLGDPAPSLSVAASTSSQPVSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDPFAAPQMAPAFAAFPAFGGQTPSQGGFANFDAFSSGPSSSVFGSLPPAGQASFQAQPTPAGSSQGTPFGATPLAPASQPNSLADVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMGGGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAPGPGFGMSSAGPGFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSAKLGQRPLSQPAGISTNPFMTGPSSSPFASKPPTTNPFL", "length": 481 }, "evidence": [ { "id": "A0A5G2R2I4", "url": "https://omabrowser.org/oma/group/A0A5G2R2I4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q80WC7-1", "protein_name": "Arf-GAP domain and FG repeat-containing protein 2", "gene_name": "Agfg2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVMAAKKGPGPGGGVGGSKAEAEAASEVWCRRVRELGGCSQAGNRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPHRVKSISMTTFTEPEVLFLQSRGNEVCRKIWLGLFDARTSLIPDSRDPQKVKEFLQEKYEKKRWYVPPEQVKGPSYSKGSVSATPVQGSVPEGKPIRTLLGDPVPSLSDPASTSSQPGSQSQARSSSQARSSQPPSHSSTKKASTDLLADIGGDPFAAPQVVPAFASFPGFGVGQTPAHGGFANFDAFSSSPSSSTFGSLPPSVQAPFQAQPTPAGSGQMSAFGVAPLAAASQPNNLADVGGLLGPRMAAGGLPGSVFGMPSQVPALQSAVPGVSGSGGLPFGAYTNPFATPAQAQLPSTNPFQPNGLASGPGFGMSSVRPGLLQPVPPSGAFASPFSAPVFPTQAGLADQQNGSSFGDLGTSKLGQRPLSQPAGISTNPFMTGSSAFASKPPTTNPFL", "length": 479 }, "evidence": [ { "id": "A0A5G2R2I4", "url": "https://omabrowser.org/oma/group/A0A5G2R2I4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "acrosome assembly", "id": "GO:0001675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001675", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "pmid": "" }, { "name": "spermatid nucleus differentiation", "id": "GO:0007289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007289", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "pmid": "" }, { "name": "intermediate filament organization", "id": "GO:0045109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045109", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2I4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-A0A5G2R2I4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 479, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-A0A5G2R2I4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/A0A5G2R2I4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "A0A5G2R2I4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2I4" }, { "id": "PS50115", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50115" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Arf-GAP", "eco_id": "ECO_0000259", "start_pos": 27, "end_pos": 153, "start_aa": "Glu", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "A0A5G2R0C5-1", "uniprot_ac": "A0A5G2R0C5", "uniprot_id": "A0A5G2R0C5_PIG", "mass": { "chemical_mass": 20241.0, "monoisotopic_mass": 20241.0 }, "refseq": {}, "gene_names": [ { "name": "N4BP2L1", "type": "recommended", "evidence": [ { "id": "A0A5G2R0C5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5" } ] } ], "protein_names": [ { "name": "NEDD4 binding protein 2 like 1", "type": "synonym", "evidence": [ { "id": "A0A5G2R0C5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0C5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "N4BP2L1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5", "locus": { "chromosome": "11", "start_pos": 8857175, "end_pos": 8885420, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000040566", "url": "https://www.ensembl.org/id/ENSSSCG00000040566" } ] } } ], "crossref": [ { "id": "A0A5G2R0C5", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R0C5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000040566", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000040566", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153367", "url": "https://www.ncbi.nlm.nih.gov/gene/100153367", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026302", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026302", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153367", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153367", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AHA0", "url": "https://www.orthodb.org/?gene=A0A287AHA0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13308", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13308", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13308:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13308:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13671", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13671", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AHA0", "url": "https://www.uniprot.org/uniprotkb/A0A287AHA0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHA0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHA0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0C5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0C5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEESFLESFGRLSLRQQQPQPRPPAPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTNLHAWEMKPYAVMVFQTEQKNLFRLELDMVVFRPEMKKHSWGPKRENPPNERTV", "length": 171, "header": "tr|A0A5G2R0C5-1|A0A5G2R0C5_PIG Isoform 1 of NEDD4 binding protein 2 like 1 OS=Sus scrofa OX=9823 GN=N4BP2L1 PE=4 SV=1 CANONICAL=A0A5G2R0C5-1" }, "isoforms": [ { "isoform_ac": "A0A287AHA0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5/entry#A0A287AHA0-1", "sequence": { "sequence": "MEESFLESFGRLSLRQQQPQPRPPAPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNIHGVPREKIHRMKERYEHDVTFHSVLRAEKPSRASRSQDRNNAAPSDGAGYWNTYAELPNRRAQGGFSNESAFHRRGGFHHGY", "length": 241, "header": "tr|A0A287AHA0-1|A0A287AHA0_PIG Computationally mapped isoform of NEDD4 binding protein 2 like 1 OS=Sus scrofa OX=9823 GN=N4BP2L1 PE=4 SV=2 CANONICAL=A0A5G2R0C5-1" }, "locus": { "chromosome": "11", "start_pos": 8885420, "end_pos": 8862058, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041843.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041843.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043404.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043404.2" } ] } }, { "isoform_ac": "A0A5G2R0C5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0C5/entry#A0A5G2R0C5-1", "sequence": { "sequence": "MEESFLESFGRLSLRQQQPQPRPPAPPPRGTPPRRHSFRKHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQKRARKAMRNGISPIIIDNTNLHAWEMKPYAVMVFQTEQKNLFRLELDMVVFRPEMKKHSWGPKRENPPNERTV", "length": 171, "header": "tr|A0A5G2R0C5-1|A0A5G2R0C5_PIG Isoform 1 of NEDD4 binding protein 2 like 1 OS=Sus scrofa OX=9823 GN=N4BP2L1 PE=4 SV=1 CANONICAL=A0A5G2R0C5-1" }, "locus": { "chromosome": "11", "start_pos": 8885420, "end_pos": 8862260, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082985.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082985.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067651.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067651.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., 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Involved in bone resorption.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AN20", "url": "https://www.uniprot.org/uniprotkb/A0A287AN20#function" }, { "database": "UniProtKB", "id": "ARBA00045550", "url": "https://www.uniprot.org/uniprotkb/ARBA00045550#function" }, { "database": "UniProtKB", "id": "A0A287B9E1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9E1#function" }, { "database": "UniProtKB", "id": "F1S6M6", "url": "https://www.uniprot.org/uniprotkb/F1S6M6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S6M6", "url": "https://www.uniprot.org/uniprotkb/F1S6M6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DEF8", "url": "https://www.uniprot.org/uniprotkb/F1S6M6", "locus": { "chromosome": "6", "start_pos": 140908, "end_pos": 160692, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002640", "url": "https://www.ensembl.org/id/ENSSSCG00000002640" } ] } } ], "crossref": [ { "id": "F1S6M6", "url": "https://alphafold.ebi.ac.uk/entry/F1S6M6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000002640", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002640", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20819", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20819", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100523845", "url": "https://www.ncbi.nlm.nih.gov/gene/100523845", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025258", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025258", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046349", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046349", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047983", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047983", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051366", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051366", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NMICPKC", "url": "https://omabrowser.org/oma/group/NMICPKC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S6M6", "url": "https://www.orthodb.org/?gene=F1S6M6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12326", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12326", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12326:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12326:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00130", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00130", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13901", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13901", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013849738", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849738", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AN20", "url": "https://www.uniprot.org/uniprotkb/A0A287AN20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AN20-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AN20-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9E1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9E1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": 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"6", "start_pos": 157033, "end_pos": 147140, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037280.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037280.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053105.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053105.2" } ] } }, { "isoform_ac": "F1S6M6-1", "url": "https://www.uniprot.org/uniprotkb/F1S6M6/entry#F1S6M6-1", "sequence": { "sequence": "MEYDEKLARFRQVHLNPFDKQHERGAGEEALDARAGEALPELPPGEPEFRCPERVMDLGLSEDHFARPVGLFLASDVQQLRQAIQECKEAILELPEHSEKQKDAVVRLVHLRLKLQELKDPNEDEPNIRVLLEHRFYKEKSKSVKQTCDKCNTIIWGLIQTWYTCTGCYYRCHSKCLNLISKPCVRSKVSHQAEYELSICPEAGLDSQDYRCAECRAPISLRGVPSEARQCDYTGQYYCSHCHWNDLAVIPARVVHNWDFEPRKVSRGSMRYLSLMVSRPVLRLREINPLLFNYVEELVEIRKLRQDILLMKPYFITCREAMAARLLLQLQDRQHFVENDEMYSVQDLLDTHSGRLGCSLAETHTLFAKHIKLDCERCQAKGFVCELCREGDVLFPFDSHTSVCADCSAVFHRDCYYDNSTTCPRCARLTLRKQSLFQEPCPDVDA", "length": 446, "header": "tr|F1S6M6-1|F1S6M6_PIG Isoform 1 of Differentially expressed in FDCP 8 homolog OS=Sus scrofa OX=9823 GN=DEF8 PE=3 SV=5 CANONICAL=F1S6M6-1" }, "locus": { "chromosome": "6", "start_pos": 157033, "end_pos": 147140, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002930.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002930.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002851.5", "url": "https://www.ensembl.org/id/ENSSSCP00000002851.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S6M6", "url": "https://www.uniprot.org/uniprotkb/F1S6M6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y0K9-1", "protein_name": "Differentially expressed in FDCP 8 homolog", "gene_name": "DEF8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAYDERLARFRQAHLNPFNKGPEPPGGAGGGGAGEDEPLPPGAPPLDAARRHEPGQGDGEGSERPMDLGLAEDHFSRPVGLILAPDVQQLRRAIEECRRAILALPEHSERQKDAVVRLIHLRLKLQELQDPDEEEPNIRVVLEHRFYKEKSKSVKQMCDKCSTIIWGLIQTWYTCTGCYYRCHSKCLPLVTKPCVRSKVSHQAEYQLSICPESGLDSQDYRCAECRAPIALRGVPSEARQCDYTGLYYCSSCHWNDLAVVPARAIHNWDFEPRKVSRCSMRYLALMVSRPVLKLREINPLLFNYVEELVEIRKLRQDILLMKPYFITCKEAMEARLLLQLQDRQHFVENDEMYSLQDLIDIEAGRLSCSLTEIHTLFAKHIKLDCERCQAKGFVCELCKEGDVLFPFDSHTSVCTDCSAVFHRASLPHRDCYYDNSTTCPKCARLSLRKQSLFQDSVAEAEP", "length": 462 }, "evidence": [ { "id": "F1S6M6", "url": "https://omabrowser.org/oma/group/F1S6M6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AC58HT36-1", "protein_name": "Differentially expressed in FDCP 8 homolog isoform X1", "gene_name": "def8", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEYNERLARFRQGHVNPFDRDEIDSQTEGKDPPKDGVKAEIFSSEIKSQNSDPPMDLGLAEDHFSRPVGLFVASDVEQLKLAIEECKRLILELPEHSEKQKDAVVKLIHLRLKLQELQDPEEDEPNLQVMLEHRFSKEKSKSVKQMCDKCSTIIWGLIQTWYTCTGCYYRCHSKCMSLINKPCVRSKVSHQSEYELNICPEIGLDKQDYRCSECRTPISLRGIPNEARQCDYTGQYYCSSCHWNDTAIVPARVIHNWEFEPRKVCRSSMRYLALMMPRPVLRLKEINPLLFNFVEDLVEIRKLRQDILLMKPYFITCKEAMEARLLLHLQDRQHFVENDDMYSLQDLIDTSNGRLSCSLTEIHTTFAKHIKLDCEKCQAKGFVCELCKEGDSLFPFDSHTSVCHDCLAVFHRDCYYDNSTMCPHCERMLEHKLEVPLKL", "length": 439 }, "evidence": [ { "id": "F1S6M6", "url": "https://omabrowser.org/oma/group/F1S6M6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q4V8I4-1", "protein_name": "Differentially expressed in FDCP 8 homolog", "gene_name": "Def8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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SV=1 CANONICAL=A0A5G2R1R3-1" }, "locus": { "chromosome": "7", "start_pos": 98819756, "end_pos": 98813523, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065940.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065940.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045575.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045575.2" } ] } }, { "isoform_ac": "A0A5G2R1R3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1R3/entry#A0A5G2R1R3-1", "sequence": { "sequence": "MKSSTPASQTSPGLGFVHIVEIWMQEQTHGLGSLRDGCGHSVNGLQARTFGIWTLLSSMIRCLCAIDIHNKTLYLITLCTFFLALGHFLTELFVFGTAAPTISVLAPLVVASSSILGMLVGLQYLEAEPGSRQKKRN", "length": 137, "header": "tr|A0A5G2R1R3-1|A0A5G2R1R3_PIG Isoform 1 of Ergosterol biosynthesis 28 homolog OS=Sus scrofa OX=9823 GN=ERG28 PE=3 SV=2 CANONICAL=A0A5G2R1R3-1" }, "locus": { "chromosome": "7", "start_pos": 98819542, "end_pos": 98813523, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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"sequence": { "sequence": "MLPLITVLTVKHSDARTHSLRYFRLGISDPGHEMPEFISVGYVDSYPITTYDSVSRQKEPRAPWMAENLEPDHWERYTQLLRGWQQTFKAELKQLQRHYNHSGLHTYQRMIGCELLEDGSTTGFLQYAYDGQDFIIFNKDTLSWMAVDNVAHITKQAWEANWHELQYQKNWLEQECVAWLRRFLEYGKDTLQRTEPPLVRVYHKETVPGITTLYCRAHGFYPPEISMTWMKNEEEMVQEMDYGDILPSGDGTYQTWVSVELDSQSSDVYSCHVKHCGVHTVLQGARELETMLLVLKAGAGFIVPAIALAGVGPHFAITGLGTPLSPCREHTPWMMLAMRVVCFIGDG", "length": 347, "header": "tr|A0A5G2R2T2-1|A0A5G2R2T2_PIG Computationally mapped isoform of Major histocompatibility complex, class I-related OS=Sus scrofa OX=9823 GN=MR1 PE=3 SV=1 CANONICAL=F1S677-1" }, "locus": { "chromosome": "9", "start_pos": 122605301, "end_pos": 122592641, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090716.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090716.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064854.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064854.1" } ] } }, { "isoform_ac": "F1S677-1", "url": "https://www.uniprot.org/uniprotkb/F1S677/entry#F1S677-1", "sequence": { "sequence": "MLPLITVLTVKHSDARTHSLRYFRLGISDPGHEMPEFISVGYVDSYPITTYDSVSRQKEPRAPWMAENLEPDHWERYTQLLRGWQQTFKAELKQLQRHYNHSGLHTYQRMIGCELLEDGSTTGFLQYAYDGQDFIIFNKDTLSWMAVDNVAHITKQAWEANWHELQYQKNWLEQECVAWLRRFLEYGKDTLQRTEPPLVRVYHKETVPGITTLYCRAHGFYPPEISMTWMKNEEEMVQEMDYGDILPSGDGTYQTWVSVELDSQSSDVYSCHVKHCGVHTVLQGARELETMLLVLKAGAGFIVPAIALAGVGILAWRRRPREQNGIIYLPTPAHDGR", "length": 337, "header": "tr|F1S677-1|F1S677_PIG Isoform 1 of Major histocompatibility complex, class I-related OS=Sus scrofa OX=9823 GN=MR1 PE=3 SV=3 CANONICAL=F1S677-1" }, "locus": { "chromosome": "9", "start_pos": 122606330, "end_pos": 122592641, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016929.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016929.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016476.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016476.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZR6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZR6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511275", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511275", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "C1ITJ8-1", "protein_name": "Major histocompatibility complex class I-related protein 1", "gene_name": "MR1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MMLLLPLIIVLMMKLSDARTHSLRYFRLGISEPGYGIPEFISAGYVDSHPITMYNSVSQLKEPRALWMEENLAPDHWERYTQLLRGWQQAFKVELKQLQHHYNHSGFHTYQRMIGCELLEDGSITGFLQYAYDGQDFLIFNKDTLSWMAMDNVADIIRRVWEANRHELQYQKNWLEEECIAWLKRFLEYGKDALQRTEPPKVRVNHKETFPGITTLYCRAYGFYPPEISINWMKNGEEIFQDTDYGGILPSGDGTYQTWVSVELDPQNGDIYSCHVEHGGVHMVLQGFQESETILLVVKAVGFIVLAIALAGVGILAWRKRPRGKNKVICLSTPEH", "length": 336 }, "evidence": [ { "id": "F1S677", "url": "https://omabrowser.org/oma/group/F1S677/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O19477-1", "protein_name": "Major histocompatibility complex class I-related protein 1", "gene_name": "Mr1", "tax_id": 10116, "organism": 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"database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8856825", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856825", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8856828", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8856828", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013420", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013420", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020944016", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944016", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B997", "url": "https://www.uniprot.org/uniprotkb/A0A287B997", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B997-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B997-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QB09", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QB09-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB09-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2P9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2P9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHE3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHE3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FHE3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHE3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJB3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJB3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJB3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQI7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FQI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FQI7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDJ6", "url": "https://www.uniprot.org/uniprotkb/F1SDJ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDJ6-1", "url": "https://www.uniprot.org/uniprotkb/F1SDJ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMAQFPTAMNGGPNMWAITSEERTKHDKQFDNLKPSGGYITGDQARTFFLQSGLPAPVLAEIWALSDLNKDGKMDQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMGSMPNLSIPQSLPPVAPIATPLPSATSGTTLPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSTLPHTSSYSLMMGGFGGASIQKAQSLIDLGSSSSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKSMSGYLSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKAEEFILAMHLTDMAKAGQPLPLTLPPELVPPSFRGGKQTDSINGTLPSYQKIQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQAMMEQQQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRRQELLNRRNREQEEIVRLNSKKKSLHLELEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQLTNTPDLGISLLQKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKELRESYNTQQLALEQLYKIKRDKLKEIERKRSELIQKKKLEDEATRKAKQGKENLWKENLRKEEEEKQKRLQEEKTQEKVKEEERKAEEKQCEPAGALVNYKALYRFEARSHDEMSFNSGDIIQVDEKTTGEPGWLYGSFQGNFGWFPCNYVEKMTSNEKSVSPKKALLPPTVSLSTTSTSESLSSNQPASVTDYQNVSLSNLTVNTSWQKKSAFTRTVSPVSVSPIHGQGQIVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYVKIIPGSEVKREEPEALYAAVNKKPTSAGCTVGEEYIALYPYSSVEPGDLTFAEGEEILVTQKDGEWWTGSIGDRTGIFPSNYVKPKDQESFGSASKSGTSNKKPEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERTTPAFHPVCQVIAMYDYIANNEDELNFSKGQLINVLNKDDPDWWQGEINGVTGLFPSNYVKMTTDTDPSQQWCADLQTLDTMQPAERKRQGYIHELIETEERYVDDLQLVVEVFQKRMAEPGFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEKMPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEHADFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLIRSILENTPENHVDHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQTHVQCEGLTEQLVFNSLTNCLGPRKLLHSGKLYKTKSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFRMYKTPIFLNEALVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDTEKKKREKAYQARSQKTSGIGRLMVHIIEATELKACKPNGKSNPYCEISMGSQSYTTRTLQDTLNPKWNFNCQFFIKDLYQDVLCLTMFDRDQFSPDDFLGRTEVPVAKIRTEQESKGPTTRRLLLHEVPTGEVWVRFDLQLFEQKTLL", "length": 1655, "header": "tr|A0A5G2R2P9-1|A0A5G2R2P9_PIG Isoform 1 of Intersectin 2 OS=Sus scrofa OX=9823 GN=ITSN2 PE=1 SV=2 CANONICAL=A0A5G2R2P9-1" }, "isoforms": [ { "isoform_ac": "A0A287B997-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9/entry#A0A287B997-1", "sequence": { "sequence": "MGIILLPLSFFYVLGGPNMWAITSEERTKHDKQFDNLKPSGGYITGDQARTFFLQSGLPAPVLAEIWALSDLNKDGKMDQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMCLLISLPPVAPIATPLPSATSGTTLPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSSKFFVSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKSMSGYLSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKAEEFILAMHLTDMAKAGQPLPLTLPPELVPPSFRGGKQTDSINGTLPSYQKIQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQAMMEQQQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRRQELLNRRNREQEEIVRLNSKKKSLHLELEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQVSPLLLSFSIKCNLCDVCVSDLGISLLQKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKELRESYNTQQLALEQLYKIKRDKLKEIERKRSELIQKKKLEDEEQIMTIIFFIGEPAGALVNYKALYRFEARSHDEMSFNSGDIIQVDEKTTGEPGWLYGSFQGNFGWFPCNYVEKMTSNEKSVSPKKALLPPTVSLSTTSTSESLSSNQPASVTDYQNVSLSNLTVNTSWQKKSAFTRTVSPVSVSPIHGQGQIVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYVKIIPGNKSLLAVPSLFLCALFPTEYIALYPYSSVEPGDLTFAEGEEILVTQKDGEWWTGSIGDRTGIFPSNYVKPKDQESFGSASKSGTSNKKPEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERTTPAFHPGMEMVCQVIAMYDYIANNEDELNFSKGQLINVLNKDDPDWWQGEINGVTGLFPSNYVKMTTDTDPSQQLRKQGNLFIRSKVILLSFKCFFPSFRPYSLTLSKKSYNSLIGSLV", "length": 1112, "header": "tr|A0A287B997-1|A0A287B997_PIG Computationally mapped isoform of Intersectin 2 OS=Sus scrofa OX=9823 GN=ITSN2 PE=1 SV=2 CANONICAL=A0A5G2R2P9-1" }, "locus": { "chromosome": "3", "start_pos": 114472635, "end_pos": 114404085, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063673.2", "url": "https://www.ensembl.org/id/ENSSSCT00000063673.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053096.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053096.2" } ] } }, { "isoform_ac": "A0A5G2QB09-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9/entry#A0A5G2QB09-1", "sequence": { "sequence": "MMAQFPTAMNGGPNMWAITSEERTKHDKQFDNLKPSGGYITGDQARTFFLQSGLPAPVLAEIWALSDLNKDGKMDQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMGSMPNLSIPQSLPPVAPIATPLPSATSGTTLPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSTLPHTSSYSLMMGGFGGASIQKAQSLIDLGSSSSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKSMSGYLSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKAEEFILAMHLTDMAKAGQPLPLTLPPELVPPSFRGGKQTDSINGTLPSYQKIQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQAMMEQQQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRRQELLNRRNREQEEIVRLNSKKKSLHLELEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQLTNTPDLGISLLQKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKCGNMDDSVLQCLLSLLSCLNNLFLLLKELRESYNTQQLALEQLYKIKRDKLKEIERKRSELIQKKKLEDEATRKAKQGKENLWKENLRKEEEEKQKRLQEEKTQEKVKEEERKAEEKQCKDKDILKAKKKKSEPAGALVNYKALYRFEARSHDEMSFNSGDIIQVDEKTTGEPGWLYGSFQGNFGWFPCNYVEKMTSNEKSVSPKKALLPPTVSLSTTSTSESLSSNQPASVTDYQNVSLSNLTVNTSWQKKSAFTRTVSPVSVSPIHGQGQIVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYVKIIPGSEVKREEPEALYAAVNKKPTSAGCTVGEEYIALYPYSSVEPGDLTFAEGEEILVTQKDGEWWTGSIGDRTGIFPSNYVKPKDQESFGSASKSGTSNKKPEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERTTPAFHPVCQVIAMYDYIANNEDELNFSKGQLINVLNKDDPDWWQGEINGVTGLFPSNYVKMTTDTDPSQQWCADLQTLDTMQPAERKRQGYIHELIETEERYVDDLQLVVEVFQKRMAEPGFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEKMPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEHADFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLIRSILENTPENHVDHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQTHVQCEGLTEQLVFNSLTNCLGPRKLLHSGKLYKTKSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFRMYKTPIFLNEALVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDTEKKKREKAYQARSQKTSGIGRLMVHIIEATELKACKPNGKSNPYCEISMGSQSYTTRTLQDTLNPKWNFNCQFFIKDLYQDVLCLTMFDRDQFSPDDFLGRTEVPVAKIRTEQESKGPTTRRLLLHEVPTGEVWVRFDLQLFEQKTLL", "length": 1695, "header": "tr|A0A5G2QB09-1|A0A5G2QB09_PIG Computationally mapped isoform of Intersectin 2 OS=Sus scrofa OX=9823 GN=ITSN2 PE=1 SV=1 CANONICAL=A0A5G2R2P9-1" }, "locus": { "chromosome": "3", "start_pos": 114507680, "end_pos": 114393484, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073254.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073254.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061222.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061222.1" } ] } }, { "isoform_ac": "A0A5G2R2P9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9/entry#A0A5G2R2P9-1", "sequence": { "sequence": "MMAQFPTAMNGGPNMWAITSEERTKHDKQFDNLKPSGGYITGDQARTFFLQSGLPAPVLAEIWALSDLNKDGKMDQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMGSMPNLSIPQSLPPVAPIATPLPSATSGTTLPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSTLPHTSSYSLMMGGFGGASIQKAQSLIDLGSSSSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKSMSGYLSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKAEEFILAMHLTDMAKAGQPLPLTLPPELVPPSFRGGKQTDSINGTLPSYQKIQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQAMMEQQQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRRQELLNRRNREQEEIVRLNSKKKSLHLELEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQLTNTPDLGISLLQKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKELRESYNTQQLALEQLYKIKRDKLKEIERKRSELIQKKKLEDEATRKAKQGKENLWKENLRKEEEEKQKRLQEEKTQEKVKEEERKAEEKQCEPAGALVNYKALYRFEARSHDEMSFNSGDIIQVDEKTTGEPGWLYGSFQGNFGWFPCNYVEKMTSNEKSVSPKKALLPPTVSLSTTSTSESLSSNQPASVTDYQNVSLSNLTVNTSWQKKSAFTRTVSPVSVSPIHGQGQIVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYVKIIPGSEVKREEPEALYAAVNKKPTSAGCTVGEEYIALYPYSSVEPGDLTFAEGEEILVTQKDGEWWTGSIGDRTGIFPSNYVKPKDQESFGSASKSGTSNKKPEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERTTPAFHPVCQVIAMYDYIANNEDELNFSKGQLINVLNKDDPDWWQGEINGVTGLFPSNYVKMTTDTDPSQQWCADLQTLDTMQPAERKRQGYIHELIETEERYVDDLQLVVEVFQKRMAEPGFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEKMPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEHADFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLIRSILENTPENHVDHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQTHVQCEGLTEQLVFNSLTNCLGPRKLLHSGKLYKTKSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFRMYKTPIFLNEALVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDTEKKKREKAYQARSQKTSGIGRLMVHIIEATELKACKPNGKSNPYCEISMGSQSYTTRTLQDTLNPKWNFNCQFFIKDLYQDVLCLTMFDRDQFSPDDFLGRTEVPVAKIRTEQESKGPTTRRLLLHEVPTGEVWVRFDLQLFEQKTLL", "length": 1655, "header": "tr|A0A5G2R2P9-1|A0A5G2R2P9_PIG Isoform 1 of Intersectin 2 OS=Sus scrofa OX=9823 GN=ITSN2 PE=1 SV=2 CANONICAL=A0A5G2R2P9-1" }, "locus": { "chromosome": "3", "start_pos": 114507680, "end_pos": 114393484, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075108.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075108.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064819.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064819.2" } ] } }, { "isoform_ac": "A0A8W4FHE3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9/entry#A0A8W4FHE3-1", "sequence": { "sequence": "MLCPFCVKCSYPTSSHGGPNMWAITSEERTKHDKQFDNLKPSGGYITGDQARTFFLQSGLPAPVLAEIWALSDLNKDGKMDQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMGSMPNLSIPQSLPPVAPIATPLPSATSGTTLPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSTLPHTSSYSLMMGGFGGASIQKAQSLIDLGSSSSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKSMSGYLSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKAEEFILAMHLTDMAKAGQPLPLTLPPELVPPSFRGGKQTDSINGTLPSYQKIQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQAMMEQQQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRRQELLNRRNREQEEIVRLNSKKKSLHLELEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQLTNTPDLGISLLQKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKCGNMDDSVLQCLLSLLSCLNNLFLLLKELRESYNTQQLALEQLYKIKRDKLKEIERKRSELIQKKKLEDEATRKAKQGKENLWKENLRKEEEEKQKRLQEEKTQEKVKEEERKAEEKQCEPAGALVNYKALYRFEARSHDEMSFNSGDIIQVDEKTTGEPGWLYGSFQGNFGWFPCNYVEKMTSNEKSVSPKKALLPPTVSLSTTSTSESLSSNQPASVTDYQNVSLSNLTVNTSWQKKSAFTRTVSPVSVSPIHGQGQIVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYVKIIPGSEVKREEPEALYAAVNKKPTSAGCTVGEEYIALYPYSSVEPGDLTFAEGEEILVTQKDGEWWTGSIGDRTGIFPSNYVKPKDQESFGSASKSGTSNKKPEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERTTPAFHPVCQVIAMYDYIANNEDELNFSKGQLINVLNKDDPDWWQGEINGVTGLFPSNYVKMTTDTDPSQQWCADLQTLDTMQPAERKRQGYIHELIETEERYVDDLQLVVEVFQKRMAEPGFLTEGEMALIFVNWKELIMSNTKLLKALRVRKKTGGEKMPVQMIGDILAAELSHMQAYIRFCSCQLNGAALLQQKTDEHADFKEFLKKLASDPRCKGMPLSSFLLKPMQRITRYPLLIRSILENTPENHVDHSSLKLALERAEELCSQVNEGVREKENSDRLEWIQTHVQCEGLTEQLVFNSLTNCLGPRKLLHSGKLYKTKSNKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFRMYKTPIFLNEALVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQYIDTEKKKREKAYQARSQKTSGIGRLMVHIIEATELKACKPNGKSNPYCEISMGSQSYTTRTLQDTLNPKWNFNCQFFIKDLYQDVLCLTMFDRDQFSPDDFLGRTEVPVAKIRTEQESKGPTTRRLLLHEVPTGEVWVRFDLQLFEQKTLL", "length": 1688, "header": "tr|A0A8W4FHE3-1|A0A8W4FHE3_PIG Computationally mapped isoform of Intersectin 2 OS=Sus scrofa OX=9823 GN=ITSN2 PE=1 SV=1 CANONICAL=A0A5G2R2P9-1" }, "locus": { "chromosome": "3", "start_pos": 114507680, "end_pos": 114403895, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099727.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099727.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078657.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078657.1" } ] } }, { "isoform_ac": "A0A8W4FJB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9/entry#A0A8W4FJB3-1", "sequence": { "sequence": "MGIILLPLSFFYVLGGPNMWAITSEERTKHDKQFDNLKPSGGYITGDQARTFFLQSGLPAPVLAEIWALSDLNKDGKMDQQEFSIAMKLIKLKLQGQQLPVVLPPIMKQPPMFSPLISARFGMGSMPNLSIPQSLPPVAPIATPLPSATSGTTLPPLMMPAPLVPSVSTSSLPNGTASLIQPLSIPYSSSSNSTSSTASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKSMSGYLSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKAEEFILAMHLTDMAKAGQPLPLTLPPELVPPSFRGGKQTDSINGTLPSYQKIQEEEPQKKLPVTFEDKRKANYERGNMELEKRRQAMMEQQQREAERKAQKEKEEWERKQRELQEQEWKKQLELEKRLEKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRRQELLNRRNREQEEIVRLNSKKKSLHLELEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQLTNTPDLGISLLQKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQLKEQIMTIIFFIGEPAGALVNYKALYRFEARSHDEMSFNSGDIIQVGNKVDEKTTGEPGWLYGSFQGNFGWFPCNYVEKMTSNEKSVSPKKALLPPTVSLSTTSTSESLSSNQPASVTDYQNVSLSNLTVNTSWQKKSAFTRTVSPVSVSPIHGQGQIVENLKAQALCSWTAKKDNHLNFSKHDIITVLEQQENWWFGEVHGGRGWFPKSYVKIIPGSESLLAVPSLVSRFLCALFPTEYIALYPYSSVEPGDLTFAEGEEILVTQKDGEWWTGSIGDRTGIFPSNYVKPKDQESFGSASKSGTSNKKPEIAQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGPSSERTTPAFHPVCQVIAMYDYIANNEDELNFSKGQLINVLNKDDPDWWQGEINGVTGLFPSNYVKMTTDTDPSQQCE", "length": 1041, "header": "tr|A0A8W4FJB3-1|A0A8W4FJB3_PIG Computationally mapped isoform of Intersectin 2 OS=Sus scrofa OX=9823 GN=ITSN2 PE=1 SV=1 CANONICAL=A0A5G2R2P9-1" }, "locus": { "chromosome": "3", "start_pos": 114472378, "end_pos": 114404085, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093476.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093476.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079555.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079555.1" } ] } }, { "isoform_ac": "A0A8W4FQI7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2P9/entry#A0A8W4FQI7-1", "sequence": { "sequence": 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Characterized by unusual gating kinetics by producing relatively small outward currents during membrane depolarization and large inward currents during subsequent repolarization which reflect a rapid inactivation during depolarization and quick recovery from inactivation but slow deactivation (closing) during repolarization. Channel properties are modulated by cAMP and subunit assembly. 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15374858, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017295", "url": "https://www.ensembl.org/id/ENSSSCG00000017295" } ] } } ], "crossref": [ { "id": "A0A5G2R2U0", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R2U0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017295", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017295", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00038", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00038", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00130", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00130", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000014", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000014", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000595", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000595", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003938", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003938", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003967", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003967", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005821", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005821", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014710", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014710", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018490", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018490", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050818", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050818", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FWEDRRP", "url": "https://omabrowser.org/oma/group/FWEDRRP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10217", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10217", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10217:SF468", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10217:SF468", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00027", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00027", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00520", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00520", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13426", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13426", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1296072", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1296072", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "29463", "url": "https://www.rhea-db.org/rhea/29463", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QHI3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHI3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHI3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHI3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2U0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2U0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9R0", "url": "https://www.uniprot.org/uniprotkb/I3L9R0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9R0-1", "url": "https://www.uniprot.org/uniprotkb/I3L9R0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPRSAMSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDLAQLLAKRGSRSLSQRLLSPSFLGSEGSHGRPGTQGPGPGRVKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTLLHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGDCGYTCSPLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACICSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFHGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHARPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFADSFWSKLEVTFNLRDAGGGLQSSPQQASGSQDHQGFFLSDNQSGAAPSLSISDASGLWPELLQQVPPRPSHSPPNPQGDPDCWPRELGSRLEQLQAQMNRLESRMSADLSRILQLLQQPLPQDHTGYILGAPASNDLALFPVSSVTQRPGAGLPQGDVPPAQTPSYGDSDEWSLKRSNSSSKLPPLAMDIDKTLTLCSEEEQPEGLLSPLASPLHPLEVQGLVCGPRFPSLPEHLSSVPKQLEVQRHGSDPGFAGNSH", "length": 906, "header": "tr|A0A5G2R2U0-1|A0A5G2R2U0_PIG Isoform 1 of Potassium voltage-gated channel subfamily H member 6 OS=Sus scrofa OX=9823 GN=KCNH6 PE=4 SV=1 CANONICAL=A0A5G2R2U0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QHI3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2U0/entry#A0A5G2QHI3-1", "sequence": { "sequence": "MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPRSAMSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDLAQLLAKRGSRSLSQRLLSPSFLGSEGSHGRPGTQGPGPGRVKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTLLHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGDCGYTCSPLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEPKIGWLDSLGAQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFHGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHARPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFADSFWSKLEVTFNLRDAGGGLQSSPQQASGSQDHQGFFLSDNQSPLKLGPQPPSQGYNLLGPGSQTSLGAGPRTPGHPGAAPSLSISDASGLWPELLQQVPPRPSHSPPNPQGDPDCWPRELGSRLEQLQAQMNRLESRMSADLSRILQLLQQPLPQDHTGYILGAPASNDLALFPVSSVTQRPGAGLPQGDVPPAQTPSYGDSDEWSLKRSNSSSKLPPLAMDIDKTLTLCSEEEQPEGLLSPLASPLHPLEVQGLVCGPRFPSLPEHLSSVPKQLEVQRHGSDPGFAGNSH", "length": 993, "header": "tr|A0A5G2QHI3-1|A0A5G2QHI3_PIG Computationally mapped isoform of Voltage-gated inwardly rectifying potassium channel KCNH2 OS=Sus scrofa OX=9823 GN=KCNH6 PE=3 SV=1 CANONICAL=A0A5G2R2U0-1" }, "locus": { "chromosome": "12", "start_pos": 15374571, "end_pos": 15354419, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086864.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086864.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061478.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061478.1" } ] } }, { "isoform_ac": "A0A5G2R2U0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2U0/entry#A0A5G2R2U0-1", "sequence": { "sequence": "MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPRSAMSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDLAQLLAKRGSRSLSQRLLSPSFLGSEGSHGRPGTQGPGPGRVKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTLLHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGDCGYTCSPLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACICSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFHGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHARPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFADSFWSKLEVTFNLRDAGGGLQSSPQQASGSQDHQGFFLSDNQSGAAPSLSISDASGLWPELLQQVPPRPSHSPPNPQGDPDCWPRELGSRLEQLQAQMNRLESRMSADLSRILQLLQQPLPQDHTGYILGAPASNDLALFPVSSVTQRPGAGLPQGDVPPAQTPSYGDSDEWSLKRSNSSSKLPPLAMDIDKTLTLCSEEEQPEGLLSPLASPLHPLEVQGLVCGPRFPSLPEHLSSVPKQLEVQRHGSDPGFAGNSH", "length": 906, "header": "tr|A0A5G2R2U0-1|A0A5G2R2U0_PIG Isoform 1 of Potassium voltage-gated channel subfamily H member 6 OS=Sus scrofa OX=9823 GN=KCNH6 PE=4 SV=1 CANONICAL=A0A5G2R2U0-1" }, "locus": { "chromosome": "12", "start_pos": 15374571, "end_pos": 15354419, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076956.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076956.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070657.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070657.1" } ] } }, { "isoform_ac": "I3L9R0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2U0/entry#I3L9R0-1", "sequence": { "sequence": "MENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPRSAMSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDLAQLLAKRGSRSLSQRLLSPSFLGSEGSHGRPGTQGPGPGRVKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTLLHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESRRGDCGYTCSPLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEPKIGWLDSLGAQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFHGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHARPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFADSFWSKLEVTFNLRDAGGGLQSSPQQASGSQDHQGFFLSDNQSGAAPSLSISDASGLWPELLQQVPPRPSHSPPNPQGDPDCWPRELGSRLEQLQAQMNRLESRMSADLSRILQLLQQPLPQDHTGYILGAPASNDLALFPVSSVTQRPGAGLPQGDVPPAQTPSYGDSDEWSLKRSNSSSKLPPLAMDIDKTLTLCSEEEQPEGLLSPLASPLHPLEVQGLVCGPRFPSLPEHLSSVPKQLEVQRHGSDPGFAGN", "length": 922, "header": "tr|I3L9R0-1|I3L9R0_PIG Computationally mapped isoform of Voltage-gated inwardly rectifying potassium channel KCNH2 OS=Sus scrofa OX=9823 GN=KCNH6 PE=3 SV=2 CANONICAL=A0A5G2R2U0-1" }, "locus": { "chromosome": "12", "start_pos": 15373686, "end_pos": 15354428, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029983.2", "url": "https://www.ensembl.org/id/ENSSSCT00000029983.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020773.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020773.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2U0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2U0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1296072", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1296072", "resource": "Reactome", "description": "Voltage gated Potassium channels" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7H945-1", "protein_name": "Potassium voltage-gated channel subfamily H member 6", "gene_name": "Kcnh6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPSSAVSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDLAQLLAKSGSRSLTQRLLSHSFLGSEGSHSRPSGQGPGPGRGKYRTVSQIPQFTLNFVEFNLEKHRSGSATEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESQRGTCGYTCSPLTVVDLIVDVMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEPKIGWLDSLGAQLGKHYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFHGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHARPGKSSADVRALTYCDLHKIHRADLLEVLDLYPAFADTFWNKLEVTFNLRDADGGLQSSPRQAPSNQEPQAFFINDSQSGAAPSLSISDASGLWPELLQQMPPSPPNPQQDLDCWPRELGSRLEQLQAQMNRLESRMSSDLSRILQLLQQPQGHTGYILGAPASSDLDLLPETSVTQSPEPRLLMGHSAQTLSYGDLNKHIQKPRNFSPRMHHLAVAMDQTPVPSSEQEQPEGLLTPLASSLCPLEVQGLISGPHFPSLPKDLSSVPKQLEFQRHSSDPGFTRS", "length": 949 }, "evidence": [ { "id": "A0A5G2R2U0", "url": "https://omabrowser.org/oma/group/A0A5G2R2U0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0ZHU5-1", "protein_name": "Potassium voltage-gated channel subfamily H member 6", "gene_name": "KCNH6", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPVRRGHVAPQNTYLDTIIRKFEGQNRKFLIANAQMENCAIIYCNDGFCEMFGYSRVEVMQRPCTCDFLTGPDTTKSSIAQLTQALLGSEECKLEILYYRKDTSCFRCLVDVVPVKNEDGVVIMFILNFEDLAQLIAKSSGRSLHHRLSQSWRAGEGRRLKFSLPSLRRLKAQRNSLPTSEFDGVAIDYGKPGGDSLILRDLKTSPKENCVQSETESLLEKERRPSLEADPTLQHPIPKQEPPSLGPRGSYSAWGFIRSRPGGSFHSLRRVSSLDNFEAARSEFQRKFRERRANSEASHVKPNPPNSTSDSDLMKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVTERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLNEEQGEEKHWNCSYSCDPLNIIDLIVDIMFIVDIVINFRTTYVNINDEVVSHPGKIAIHYFKGWFLIDMVAAIPFDLLIFRSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYMEHKIGWLDNLGDQIGKRYNDSDLSSGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPDCLQADICLHLNRTLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHYGDVLTTLYFISRGSIEILKEDIVVAILGKNDIFGEPISLYARPGKSNADVRALTYCDLHKIQREDLLEVLDMYPAFSDNFWSNLEITFNLRDADSVPRTPLSEEYDCTYRRVRRRKHSLCQPNKPDPDTGTSDAEQYHTYSELTNPQDPLSKDQWDDVGSSTTPCSQTSDDEAKPGSPTKAEPFPLSKKDDFALPALSLVTASASGTEVSKQAAESSQSYAATPLDIPNMFTFWEDQRPNHHPEPLQHVSLVHSSRDIPLHSDYRPGQIESRLELLQAQLSRLESRMSSDINIILQLLQRQLSQVPPAYSPISPSSHNLAMYGIVPRSLEPLTPCAPLEDEQQTAPGQSPSYAEVEKFHLKSRDSLSSGMHLTVASDETMTVYSEQEHHSPPLLNPEPPHQRAPNAQGLLRGSRFPSLPEHLEASSEHQDIQRHLSDPVLPGS", "length": 1209 }, "evidence": [ { "id": "A0A5G2R2U0", "url": "https://omabrowser.org/oma/group/A0A5G2R2U0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9T571-1", "protein_name": "Voltage-gated inwardly rectifying potassium channel KCNH2", "gene_name": "KCNH6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPRSAMSRLAQALLGAEECKVDILYYRKDASCFRCLVDVVPVKNEDGAVIMFILNFEDLAQLLAKRGSRSLSQRLLRQSFLGSDGSHGRSGAQGPGAGRVKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTLLHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESQRGDCGYTCSPLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEPKIGWLDSLGAQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFHGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPVSLHARPGKSSADVRALTYCDLHKIQRADLLEVLDMYPAFADSFWSKLEVTFNLRDAGGGLQSSPQQAPGSQDHQQGFFLSDNQSGAAPSLSISDASGLWPELLQQVPPRPNQSPQNPQGDSDCWPRELGSRLEQLQAQMNRLESRMSSDLSRILKLLQQPLPQDHTGYILGASTSNDLALFPATSATQSPGTRLPRGDPPPAQMPSYGDMDEWRPELRNSSSRMPPSAVEMDRTLTLSSEQKQPEGLLSPLASPLCPLEVQGLVCGPRYPSLPEHLSSVPKQLEFQRHGSDPGFSRS", "length": 958 }, "evidence": [ { "id": 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"MALLLCLGLTAALARGCLHCHGNFSEKFSFYRHHVNLKSWWVGDIPVSGSLLTDWSQDTMKELHLAIPAEITREKLNQVANAVYKRMDQLYQGKMYFPGYFPNELRAIFREQVHLIQNAIIESRIDCQRHCGIFQYETISCTNCTDSHVVCFGYNCESSVQWETAVQGLLQYINKWHKQSTSTRLSSSSSWSTHRTTPAFLISPSFTCLEPPHLANLTLENASECLMQH", "length": 229, "header": "tr|A0A5G2QPK2-1|F1S8I7_PIG Computationally mapped isoform of IZUMO family member 4 OS=Sus scrofa OX=9823 GN=IZUMO4 PE=3 SV=2 CANONICAL=F1S8I7-1" }, "locus": { "chromosome": "2", "start_pos": 76475169, "end_pos": 76472474, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085162.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085162.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066630.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066630.2" } ] } }, { "isoform_ac": "F1S8I7-1", "url": "https://www.uniprot.org/uniprotkb/F1S8I7/entry#F1S8I7-1", "sequence": { "sequence": "MALLLCLGLTAALARGCLHCHGNFSEKFSFYRHHVNLKSWWVGDIPVSGSLLTDWSQDTMKELHLAIPAEITREKLNQVANAVYKRMDQLYQGKMYFPGYFPNELRAIFREQVHLIQNAIIESRIDCQRHCGIFQYETISCTNCTDSHVVCFGYNCESSVQWETAVQGLLQYINKWHNLISPSFTCLEPPHLANLTLENASECLMQH", "length": 207, "header": "tr|F1S8I7-1|F1S8I7_PIG Isoform 1 of IZUMO family member 4 OS=Sus scrofa OX=9823 GN=IZUMO4 PE=3 SV=3 CANONICAL=F1S8I7-1" }, "locus": { "chromosome": "2", "start_pos": 76475169, "end_pos": 76472474, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014699.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014699.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014303.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014303.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPK2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1300645", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1300645", "resource": "Reactome", "description": "Acrosome Reaction and Sperm:Oocyte Membrane Binding" } ], "orthologs": [ { "uniprot_canonical_ac": "D3Z690-1", "protein_name": "Izumo sperm-egg fusion 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"MALLLCLVCLTAALAHGCLHCHSNFSKKFSFYRHHVNFKSWWVGDIPVSGALLTDWSDDTMKELHLAIPAKITREKLDQVATAVYQMMDQLYQGKMYFPGYFPNELRNIFREQVHLIQNAIIESRIDCQHRCGIFQYETISCNNCTDSHVACFGYNCESSAQWKSAVQGLLNYINNWHKQDTSMRPRSSAFSWPGTHRATPAFLVSPALRCLEPPHLANLTLEDAAECLKQH", "length": 232 }, "evidence": [ { "id": "F1S8I7", "url": "https://omabrowser.org/oma/group/F1S8I7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 143, "end_pos": 145, "annotation": "n_glycosylation_sequon" }, { "start_pos": 194, "end_pos": 196, "annotation": "n_glycosylation_sequon" }, { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { "start_pos": 23, "end_pos": 25, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1S8I7-F1", "pdb_chain": "global", "start_pos": 1, 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"https://www.ebi.ac.uk/interpro/entry/IPR003131", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512279", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512279", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4F6N6", "url": "https://www.orthodb.org/?gene=A0A8W4F6N6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14958", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14958", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14958:SF24", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14958:SF24", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02214", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02214", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R242-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F6N6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6N6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F6N6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F6N6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKL0", "url": "https://www.uniprot.org/uniprotkb/F1SKL0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKL0-1", "url": "https://www.uniprot.org/uniprotkb/F1SKL0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQTLGRAMRMEAGEAAPPAGAGGWGKWVRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELYSSPHGLSSESSRKTKSAEEPLEEEQQQEEEVEVEVAEVQVEADTQEKGSRPHALRPEAALLAARAPPGPPPGPLARPQSCLSCCYKPEAPGCEAPDHLQGLGVPI", "length": 296, "header": "tr|A0A5G2R242-1|A0A5G2R242_PIG Isoform 1 of Potassium channel tetramerization domain containing 17 OS=Sus scrofa OX=9823 GN=KCTD17 PE=4 SV=1 CANONICAL=A0A5G2R242-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R242-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242/entry#A0A5G2R242-1", "sequence": { "sequence": "MQTLGRAMRMEAGEAAPPAGAGGWGKWVRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELYSSPHGLSSESSRKTKSAEEPLEEEQQQEEEVEVEVAEVQVEADTQEKGSRPHALRPEAALLAARAPPGPPPGPLARPQSCLSCCYKPEAPGCEAPDHLQGLGVPI", "length": 296, "header": "tr|A0A5G2R242-1|A0A5G2R242_PIG Isoform 1 of Potassium channel tetramerization domain containing 17 OS=Sus scrofa OX=9823 GN=KCTD17 PE=4 SV=1 CANONICAL=A0A5G2R242-1" }, "locus": { "chromosome": "5", "start_pos": 10718935, "end_pos": 10708146, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075425.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075425.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071174.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071174.1" } ] } }, { "isoform_ac": "A0A8W4F6N6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242/entry#A0A8W4F6N6-1", "sequence": { "sequence": "MQTLGRAMRMEAGEAAPPAGAGGWGKWVRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELYSSPHGLSSESSRKTKLLQARGTRM", "length": 215, "header": "tr|A0A8W4F6N6-1|A0A8W4F6N6_PIG Computationally mapped isoform of Potassium channel tetramerization domain containing 17 OS=Sus scrofa OX=9823 GN=KCTD17 PE=4 SV=1 CANONICAL=A0A5G2R242-1" }, "locus": { "chromosome": "5", "start_pos": 10718935, "end_pos": 10708186, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106499.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106499.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074887.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074887.1" } ] } }, { "isoform_ac": "F1SKL0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242/entry#F1SKL0-1", "sequence": { "sequence": "MRMEAGEAAPPAGAGGWGKWVRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFLRHGKLVLDKDMAEEGVLEEAEFYNIGPLIRIIKDRMEEKDYTVTQVPPKHVYRVLQCQEEELTQMVSTMSDGWRFEQLVNIGSSYNYGSEDQAEFLCVVSKELYSSPHGLSSESSRKTKSAEEPLEEEQQQEEEVEVEVAEVQVEADTQEKAQSSQDPANLFSLPPPPPPPPLPAGAPASSSSTSSSSWISSTPCLFPLCPCPGFLSACSRLHPGAALVPASCALHPGALALHSRASCLPPPAPLLAPPASRPGEEGCGCTSSASAGHV", "length": 349, "header": "tr|F1SKL0-1|F1SKL0_PIG Computationally mapped isoform of Potassium channel tetramerization domain containing 17 OS=Sus scrofa OX=9823 GN=KCTD17 PE=4 SV=4 CANONICAL=A0A5G2R242-1" }, "locus": { "chromosome": "5", "start_pos": 10718914, "end_pos": 10709315, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000141.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000141.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000139.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000139.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512279", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512279", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "protein homooligomerization", "id": "GO:0051260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051260", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" }, { "name": "endoplasmic reticulum calcium ion homeostasis", "id": "GO:0032469", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032469", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" }, { "name": "positive regulation of cilium assembly", "id": "GO:0045724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045724", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R242", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R242" } ], "pmid": "" }, { "name": "cullin family protein binding", "id": "GO:0097602", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097602", 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{}, "gene_names": [ { "name": "AUNIP", "type": "recommended", "evidence": [ { "id": "A0A5G2R431", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431" } ] } ], "protein_names": [ { "name": "Aurora kinase A and ninein interacting protein", "type": "synonym", "evidence": [ { "id": "A0A5G2R431", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R431", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AUNIP", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431", "locus": { "chromosome": "6", "start_pos": 83272788, "end_pos": 83316418, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003552", "url": "https://www.ensembl.org/id/ENSSSCG00000003552" } ] } } ], "crossref": [ { "id": "A0A5G2R431", "url": "https://alphafold.ebi.ac.uk/entry/A0A5G2R431", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003552", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003552", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR029286", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029286", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "VTNNQNR", "url": "https://omabrowser.org/oma/group/VTNNQNR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14526", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14526", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14526:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14526:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15334", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15334", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R431", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R431-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STT7", "url": "https://www.uniprot.org/uniprotkb/F1STT7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STT7-1", "url": "https://www.uniprot.org/uniprotkb/F1STT7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRRRGPEEEEEACGVWLDAAALKRRKAQTHLIKSSTKMLTLFPGERKTKISFTQRSHPPAGTRQTSIASFFTLQPGKTNGGDQKNVSSHIESQANKESKEDAVQLDHLIQGLEDDCMAPPLATSTPADIQEATRLSPKSLRTNCHHETGIPCLTVLSLFQPDTLVHAKEGKASLACSFTQDMKNPCLLDQKEGEDSSWKRDWLHGSKKNNYQSVERDSKTPGRKRHQLLDKTNLENVSSKTNSQSPVLQTYKEFWTGADTAVKQSPCPPPVFSWDSEKNDKDSWSQLFTEDSQGQRVIAHNSRAPFRDVTNDQNQGLGQLPNSPWAQGQDRTTQLNLQPDLLFTQDSEVQALARQDCCGRFVIERQKHLW", "length": 370, "header": "tr|A0A5G2R431-1|A0A5G2R431_PIG Isoform 1 of Aurora kinase A and ninein interacting protein OS=Sus scrofa OX=9823 GN=AUNIP PE=4 SV=1 CANONICAL=A0A5G2R431-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R431-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431/entry#A0A5G2R431-1", "sequence": { "sequence": "MRRRGPEEEEEACGVWLDAAALKRRKAQTHLIKSSTKMLTLFPGERKTKISFTQRSHPPAGTRQTSIASFFTLQPGKTNGGDQKNVSSHIESQANKESKEDAVQLDHLIQGLEDDCMAPPLATSTPADIQEATRLSPKSLRTNCHHETGIPCLTVLSLFQPDTLVHAKEGKASLACSFTQDMKNPCLLDQKEGEDSSWKRDWLHGSKKNNYQSVERDSKTPGRKRHQLLDKTNLENVSSKTNSQSPVLQTYKEFWTGADTAVKQSPCPPPVFSWDSEKNDKDSWSQLFTEDSQGQRVIAHNSRAPFRDVTNDQNQGLGQLPNSPWAQGQDRTTQLNLQPDLLFTQDSEVQALARQDCCGRFVIERQKHLW", "length": 370, "header": "tr|A0A5G2R431-1|A0A5G2R431_PIG Isoform 1 of Aurora kinase A and ninein interacting protein OS=Sus scrofa OX=9823 GN=AUNIP PE=4 SV=1 CANONICAL=A0A5G2R431-1" }, "locus": { "chromosome": "6", "start_pos": 83316300, "end_pos": 83275720, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070449.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070449.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071846.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071846.1" } ] } }, { "isoform_ac": "F1STT7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431/entry#F1STT7-1", "sequence": { "sequence": "MRRRGPEEEEEACGVWLDAAALKRRKAQTHLIKSSTKMLTLFPGERKTKISFTQRSHPPAGTRQTSIASFFTLQPGKTNGGDQKNVSSHIESQANKESKEDAVQLDHLIQGLEDDCMAPPLATSTPADIQEATRLSPKSLRTNCHHETGIPCLTVLSLFQPDTLVHAKEGKASLACSFTQDMKNPCLLDQKEGEDSSWKRDWLHGSKKNNYQSVERDSKTPGRKRHQLLDKTNLENVSSKTNSQSPVLQTYKEFWTGADTAVKQSPCPPPVFSWDSEKNDKDSWSQLFTEDSQGQRVIAHNSRAPFRDVTNDQNQGLGQLPNSPWAQGQDRTTQLNLQPDLLFTQDSEGLGSASSGESPLGYPSYLQSCWPWTERRSHPLQTNCR", "length": 385, "header": "tr|F1STT7-1|F1STT7_PIG Computationally mapped isoform of Aurora kinase A and ninein interacting protein OS=Sus scrofa OX=9823 GN=AUNIP PE=4 SV=3 CANONICAL=A0A5G2R431-1" }, "locus": { "chromosome": "6", "start_pos": 83316300, "end_pos": 83273410, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003946.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003946.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003855.3", "url": "https://www.ensembl.org/id/ENSSSCP00000003855.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R431", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7JFN0-1", "protein_name": "Aurora kinase A and ninein-interacting protein isoform X2", "gene_name": "Aunip", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKARGPEEEACGVWLDAAALKRRKVQTHLVKPGTKMLTLLPRERKPGISFTQRRGTRQTSIASFVTLQPGMANDNRKSILTFKENQINKECKGTQLDCLVQRLGDDCLVSPLATSTPADIQEAGHSPPSPQISSCHSLETTPSLTTMSLPQPDILMGAGSNEASLASSFTQYLESSCLDQREARRKREWLHGSKTNCPGMGSHVRPSSGKCCQTLDKAELEGKGPAKENRKAPVHLQTYKFESWSRKKPMLVTKSPCPLSVFSWDNERNDRDSWSQLFTEDSQGQKVIAHNTKMPFQDVTNVSNQGLGQFPDSPQAQCQDGPTLLDLQSNLLFTQDSEGNQVIRH", "length": 345 }, "evidence": [ { "id": "A0A5G2R431", "url": "https://omabrowser.org/oma/group/A0A5G2R431/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A4IFU8-1", "protein_name": "Aurora kinase A- and ninein-interacting protein", "gene_name": "AUNIP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRRRGPEKEEEACGVWLDAAALKRRKTQTQLIKSSTKMLTLLPGERKAKISFTQRSCPSAGTRQTSIASFLTSQQGKTNGADQRSVSSHTESQTNKESKEDATQLEHLTQGLRADFMAPPLATSTPADIQEARLSPQSLKASCQHGIGTPYLTVPCLFRPDTSVCAGASKASLACSFAHDLESSCLLDQKEGEDSSCEREWLQGSKKNNYQSVERHSKTTGHKGHQLLDKTNLENVSAKRSRQAPVLQTYKDSRRGANMKAVKQSSCPIPGFSWDSERNDKDSWSQLFTEDSQGQRVIAHNSRAPFRDVTNDQNQGYGRVPNSLWAQCQDRTTQFNLQPDSLFTQDSEGNQVIRHQA", "length": 357 }, "evidence": [ { "id": "A0A5G2R431", "url": "https://omabrowser.org/oma/group/A0A5G2R431/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZUC4-1", "protein_name": "Aurora kinase A- and ninein-interacting protein", "gene_name": "Aunip", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRRGPEEEACGVWLDAAALKRQKMQTHLLKLGTKMLTLLPGERKPSIPFTQRRATRQTSITSFVTSQPGMANGGNQKNASSLKENQINRECKSRSQLDCLDQGLEDDCLVSPLATSTPADIREAGHSPQSSQISGCQSLETTSLTMMSFPQPVVLMGTGESKAPLASSFTQFLERSCLLDQREAKRKREGLCGSKTDCPGMGSHIRPPGGKCHQPLDKAKVEKRATAKENRQAPVHLQTYRFGSHSGKKTLLVTKSPCPLSVFSWDIDRKDRDSWSQLFTEDSQGHQVIAHSTKMPFQDVTNARNQGSGQFPDSPQAQGQDGPTLLHLQPHLLFTQDSEGNRVIRH", "length": 347 }, "evidence": [ { "id": "A0A5G2R431", "url": "https://omabrowser.org/oma/group/A0A5G2R431/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E9Q6Z5-1", "protein_name": "Aurora kinase A- and ninein-interacting protein", "gene_name": "Aunip", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRHRGPEEEACGVWLDAAALKRRKMQTHLIKLGTKMLPLLPGERKPNDPFTQRRGTRQTSIASFVTLQSGMASGGNQKNIFSLKENQTNKECKRTQLDCLDDGLLSPLVTSAPADIQEAGHPRSPQISGCQGLEMSSLTMMSLTQPDVLMGTGESKGPLDSSFSQYLERSCLLDQREAKRKGEGLRESKTDCPGMGSHIRPPGSKCHQPLDKAEMGKRGPTKENRQAPVHLQTYRSGSCSRKKTLLVTESPCPLSLFPWDSERSDRDSWSQLFTEDSQGQQVIAHNTKMPFRDVTNARNQGSGQFPDSPQAQGQDGPAQLHLQSYLLFTQDSEGNRVIRH", "length": 340 }, "evidence": [ { "id": "A0A5G2R431", "url": "https://omabrowser.org/oma/group/A0A5G2R431/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H7T9-1", "protein_name": "Aurora kinase A- and ninein-interacting protein", "gene_name": "AUNIP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRRTGPEEEACGVWLDAAALKRRKVQTHLIKPGTKMLTLLPGERKANIYFTQRRAPSTGIHQRSIASFFTLQPGKTNGSDQKSVSSHTESQINKESKKNATQLDHLIPGLAHDCMASPLATSTTADIQEAGLSPQSLQTSGHHRMKTPFSTELSLLQPDTPDCAGDSHTPLAFSFTEDLESSCLLDRKEEKGDSARKWEWLHESKKNYQSMEKHTKLPGDKCCQPLGKTKLERKVSAKENRQAPVLLQTYRESWNGENIESVKQSRSPVSVFSWDNEKNDKDSWSQLFTEDSQGQRVIAHNTRAPFQDVTNNWNWDLGPFPNSPWAQCQEDGPTQNLKPDLLFTQDSEGNQVIRHQF", "length": 357 }, "evidence": [ { "id": "A0A5G2R431", "url": "https://omabrowser.org/oma/group/A0A5G2R431/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "spindle pole", "id": "GO:0000922", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000922", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R431", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R431" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": 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117631227, "end_pos": 118087992, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003737", "url": "https://www.ensembl.org/id/ENSSSCG00000003737" } ] } } ], "crossref": [ { "id": "ENSSSCG00000003737", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003737", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518847", "url": "https://www.ncbi.nlm.nih.gov/gene/100518847", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR039788", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039788", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056549", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056549", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "XSRPIPS", "url": "https://omabrowser.org/oma/group/XSRPIPS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SAK1", "url": "https://www.orthodb.org/?gene=F1SAK1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12449", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12449", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12449:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12449:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23079", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23079", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020951880", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951880", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VDB0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDB0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VDB0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDB0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTE8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTE8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QTE8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QTE8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAK1", "url": "https://www.uniprot.org/uniprotkb/F1SAK1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAK1-1", "url": "https://www.uniprot.org/uniprotkb/F1SAK1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGCESSSTDNAKFKFWVKSKGFQLGQPDEVRGGSGGAKQVLYVPVKTTDGIGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHSQQDDDSAAESFNGNETLGHSSVASGGTQSREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDPNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHDDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDESAPGDKQCKPEAAQGTYSTSAVSGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638, "header": "tr|F1SAK1-1|F1SAK1_PIG Isoform 1 of Nucleolar protein 4 OS=Sus scrofa OX=9823 GN=NOL4 PE=4 SV=5 CANONICAL=F1SAK1-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VDB0-1", "url": "https://www.uniprot.org/uniprotkb/F1SAK1/entry#A0A4X1VDB0-1", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGCESSSTDNAKFKFWVKSKGFQLGQPDEVRGGSGGAKQVLYVPVKTTDGIGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHSQQDDDSAAESFNGNETLGHSSVASGGTQSREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDPNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHDDHDDSEKVNETDGVEAERLKAFNDESAPGDKQCKPEAAQGTYSTSAVSGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 536, "header": "tr|A0A4X1VDB0-1|F1SAK1_PIG Computationally mapped isoform of Nucleolar protein 4 OS=Sus scrofa OX=9823 GN=NOL4 PE=4 SV=1 CANONICAL=F1SAK1-1" }, "locus": { "chromosome": "6", "start_pos": 118086339, "end_pos": 117632093, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087722.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087722.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066381.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066381.1" } ] } }, { "isoform_ac": "A0A5G2QTE8-1", "url": "https://www.uniprot.org/uniprotkb/F1SAK1/entry#A0A5G2QTE8-1", "sequence": { "sequence": "MSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHSQQDDDSAAESFNGNETLGHSSVASGGTQSREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDPNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHDDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDESAPGDKQCKPEAAQGTYSTSAVSGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 483, "header": "tr|A0A5G2QTE8-1|F1SAK1_PIG Computationally mapped isoform of Nucleolar protein 4 OS=Sus scrofa OX=9823 GN=NOL4 PE=4 SV=2 CANONICAL=F1SAK1-1" }, "locus": { "chromosome": "6", "start_pos": 117948664, "end_pos": 117632093, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067677.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067677.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061435.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061435.2" } ] } }, { "isoform_ac": "F1SAK1-1", "url": "https://www.uniprot.org/uniprotkb/F1SAK1/entry#F1SAK1-1", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGCESSSTDNAKFKFWVKSKGFQLGQPDEVRGGSGGAKQVLYVPVKTTDGIGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHSQQDDDSAAESFNGNETLGHSSVASGGTQSREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDPNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHDDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDESAPGDKQCKPEAAQGTYSTSAVSGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638, "header": "tr|F1SAK1-1|F1SAK1_PIG Isoform 1 of Nucleolar protein 4 OS=Sus scrofa OX=9823 GN=NOL4 PE=4 SV=5 CANONICAL=F1SAK1-1" }, "locus": { "chromosome": "6", "start_pos": 118086339, "end_pos": 117632093, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004137.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004137.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004044.5", "url": "https://www.ensembl.org/id/ENSSSCP00000004044.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VDB0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VDB0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XMV7-1", "protein_name": "Nucleolar protein 4 like", "gene_name": "NOL4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MESGDRDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGDSDEVSGGAGGGKQVLYVPVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISETYAFLPREAVTRFLMSCSECQKRMHLNPDGADHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQNLQSQQDDDSAAESFNGNETVGHSSNASGGTHCREMAETNSNGKTNLEQDEQPLNLSDSPLSAQLTSEYRLDDHSSNGKNKYKTLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHDEQEDPEKVNESDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDEATPADKQYKQEPAQVTYSTSAVSSTQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSDLQPTSTTATTQHCIPGSTNVQSPSNSGPTDLSMKRQLASSSGSSSSTSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 666 }, "evidence": [ { "id": "F1SAK1", "url": "https://omabrowser.org/oma/group/F1SAK1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A3P4-1", "protein_name": "Nucleolar protein 4", "gene_name": "Nol4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLFVRVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERVQSPQTAQGQQDDDSAAESSNGNETLGHSSVASGGAHGREPGDSSSDGKTGLEQEEQPLNLSDSPRSAQLTSEYRVEDQGSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNEGVDRGAEDLSLSRGDEDEDEHDEHEDSEKVNESDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDKTQDEATPADKQCKPEAAQATYSTSTVPGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDTSSSGPTDLSMKRQLAPGSGSSSSSNPRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638 }, "evidence": [ { "id": "F1SAK1", "url": "https://omabrowser.org/oma/group/F1SAK1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3N0K6-1", "protein_name": "Nucleolar protein 4", "gene_name": "NOL4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MESERDVYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGCESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQEEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHGQQDDDSATESFNGNETLGHSSIASGGTHSREMGDSNCDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHSTNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHDDHEDSEKANETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDESAPTDKQCKPEAAQGTYSTSAVSGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638 }, "evidence": [ { "id": "F1SAK1", "url": "https://omabrowser.org/oma/group/F1SAK1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O94818-1", "protein_name": "Nucleolar protein 4", "gene_name": "NOL4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQNLHGQQDDDSAAESFNGNETLGHSSIASGGTHSREMGDSNSDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHNSNGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDDHEDHDDSEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLERQQDESAPADKQCKPEATQATYSTSAVPGSQDVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSNSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN", "length": 638 }, "evidence": [ { "id": "F1SAK1", "url": "https://omabrowser.org/oma/group/F1SAK1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P60954-1", "protein_name": "Nucleolar protein 4", "gene_name": "Nol4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLFVRVKTTDGVGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQTVHGQQDDDSAAESSNGNETLGHSSAASGGAHGREPEDSSSDGKTGLEQEEQPLNLSDSPSSAQLTSEFRIDDQGSDGKNKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRGAEDLSLNRGDEDEDEHDEHEDSEKVNETDGVEAERLKAFNSRPIPSHLTSAVAESILASACESESRNAAKRMRLDKAQDEAAPADKQCKPEAAQATYSTATVPGSQEDPQI", "length": 483 }, "evidence": [ { "id": "F1SAK1", "url": "https://omabrowser.org/oma/group/F1SAK1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SAK1", "url": "https://www.uniprot.org/uniprotkb/F1SAK1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 268, "end_pos": 270, "annotation": "n_glycosylation_sequon" }, { "start_pos": 305, "end_pos": 307, "annotation": "n_glycosylation_sequon" }, { "start_pos": 349, "end_pos": 351, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 398, "end_pos": 400, "annotation": "n_glycosylation_sequon" }, { "start_pos": 550, "end_pos": 552, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SAK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAK1" }, { "id": "PF23079", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23079" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Nucleolar protein 4 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Induced following accumulation of fibronectin in forming clefts, leading to local expression of the cell-scattering SNAIL2 and suppression of E-cadherin levels, thereby altering cell morphology and reducing cell-cell adhesion. This stimulates cell separation at the base of forming clefts by local, dynamic intercellular gap formation and promotes cleft progression.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0R8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0R8#function" }, { "database": "UniProtKB", "id": "ARBA00056723", "url": "https://www.uniprot.org/uniprotkb/ARBA00056723#function" }, { "database": "UniProtKB", "id": "F1SD53", "url": "https://www.uniprot.org/uniprotkb/F1SD53#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SD53", "url": "https://www.uniprot.org/uniprotkb/F1SD53" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BTBD7", "url": "https://www.uniprot.org/uniprotkb/F1SD53", "locus": { "chromosome": "7", "start_pos": 114617508, "end_pos": 114707095, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002461", "url": "https://www.ensembl.org/id/ENSSSCG00000002461" } ] } } ], "crossref": [ { "id": "ENSSSCG00000002461", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002461", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18283", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18283", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18284", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18284", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18489", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18489", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100152664", "url": "https://www.ncbi.nlm.nih.gov/gene/100152664", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042345", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042345", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047934", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047934", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047935", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047935", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152664", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152664", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ILMKFHR", "url": "https://omabrowser.org/oma/group/ILMKFHR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SD53", "url": "https://www.orthodb.org/?gene=F1SD53", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16064", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16064", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16064:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16064:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013844673", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013844673", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2Q834", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q834", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q834-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q834-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0R8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0R8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0R8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0R8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0MUV4", "url": "https://www.uniprot.org/uniprotkb/A0A8D0MUV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0MUV4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0MUV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD53", "url": "https://www.uniprot.org/uniprotkb/F1SD53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD53-1", "url": "https://www.uniprot.org/uniprotkb/F1SD53-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGANASNYPHACSPRVGGSSQAQQTFIGTSSFSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGLFEYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYTDIVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDIEELREILSSLLPFVRIEHILPINSEILSDAMKRGLISTPPSDMLPTTESGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGDESPLMTVRQSGRCRVNSTPTAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGAPPVYLPGVKAAAPDCTNTTALGRQTVAAAAAATSTAIASEKQVCTQPVLNDLMPDIAMGVSTLSLKDRRLPELAVDTELSQSVSEVGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDAQENQQEYPDFYDFSNAACRPSTPAPGRCTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHKQKNEPIHLDVVEQPPQRSDFALAAPENAGNGPAHVRGRTAVETDLTFGLTPNRPSHSACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL", "length": 1126, "header": "tr|F1SD53-1|F1SD53_PIG Isoform 1 of BTB/POZ domain-containing protein 7 OS=Sus scrofa OX=9823 GN=BTBD7 PE=4 SV=1 CANONICAL=F1SD53-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q834-1", "url": "https://www.uniprot.org/uniprotkb/F1SD53/entry#A0A5G2Q834-1", "sequence": { "sequence": "MAGGAGAGADGGAGGGGGGGDGRGPSGGSSSGGRSLWGCEDIIAESISLDTLIAILKWSSHPYGSKWVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDIEELREILSSLLPFVRIEHILPINSEILSDAMKRGLISTPPSDMLPTTESGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGDESPLMTVRQSGRCRVNSTPTAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGAPPVYLPGVKAAAPDCTNTTALGRQTVAAAAAATSTAIASEKQVCTQPVLNDLMPDIAMGVSTLSLKDRRLPELAVDTELSQSVSEVGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDAQENQQEYPDFYDFSNAACRPSTPAPGRCTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHKQKNEPIHLDVVEQPPQRSDFALAAPENAGNGPAHVRGRTAVETDLTFGLTPNRPSHSACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL", "length": 776, "header": "tr|A0A5G2Q834-1|F1SD53_PIG Computationally mapped isoform of BTB/POZ domain-containing protein 7 OS=Sus scrofa OX=9823 GN=BTBD7 PE=4 SV=1 CANONICAL=F1SD53-1" }, "locus": { "chromosome": "7", "start_pos": 114706939, "end_pos": 114621947, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085117.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085117.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064733.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064733.2" } ] } }, { "isoform_ac": "A0A5G2R0R8-1", "url": "https://www.uniprot.org/uniprotkb/F1SD53/entry#A0A5G2R0R8-1", "sequence": { "sequence": "MGANASNYPHACSPRVGGSSQAQQTFIGTSSFSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGLFEYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYTDIVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDIEELREILSSLLPFVRIEHILPINSEILSDAMKRGLISTPPSDMLPTTESGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGAPPVYLPGVKAAAPDCTNTTALGRQTVAAAAAATSTAIASEKQVCTQPVLNDLMPDIAMGVSTLSLKDRRLPELAVDTELSQSVSEVGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDAQENQQEYPDFYDFSNAACRPSTPAPGRCTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHKQKNEPIHLDVVEQPPQRSDFALAAPENAGNGPAHVRGRTAVETDLTFGLTPNRPSHSACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL", "length": 1088, "header": "tr|A0A5G2R0R8-1|F1SD53_PIG Computationally mapped isoform of BTB/POZ domain-containing protein 7 OS=Sus scrofa OX=9823 GN=BTBD7 PE=4 SV=1 CANONICAL=F1SD53-1" }, "locus": { "chromosome": "7", "start_pos": 114675635, "end_pos": 114621947, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068038.1", "url": "https://www.ensembl.org/id/ENSSSCT00000068038.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070760.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070760.1" } ] } }, { "isoform_ac": "A0A8D0MUV4-1", "url": "https://www.uniprot.org/uniprotkb/F1SD53/entry#A0A8D0MUV4-1", "sequence": { "sequence": "MGANASNYPHACSPRVGGSSQAQQTFIGTSSFSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGLFEYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYTDIVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQEKATVIKPACATELSNSCLLPQS", "length": 410, "header": "tr|A0A8D0MUV4-1|A0A8D0MUV4_PIG Computationally mapped isoform of BTB domain containing 7 OS=Sus scrofa OX=9823 GN=BTBD7 PE=4 SV=1 CANONICAL=F1SD53-1" }, "locus": { "chromosome": "7", "start_pos": 114675635, "end_pos": 114668643, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079195.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079195.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064897.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064897.1" } ] } }, { "isoform_ac": "F1SD53-1", "url": "https://www.uniprot.org/uniprotkb/F1SD53/entry#F1SD53-1", "sequence": { "sequence": "MGANASNYPHACSPRVGGSSQAQQTFIGTSSFSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGLFEYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYTDIVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDIEELREILSSLLPFVRIEHILPINSEILSDAMKRGLISTPPSDMLPTTESGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGDESPLMTVRQSGRCRVNSTPTAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGAPPVYLPGVKAAAPDCTNTTALGRQTVAAAAAATSTAIASEKQVCTQPVLNDLMPDIAMGVSTLSLKDRRLPELAVDTELSQSVSEVGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDAQENQQEYPDFYDFSNAACRPSTPAPGRCTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHKQKNEPIHLDVVEQPPQRSDFALAAPENAGNGPAHVRGRTAVETDLTFGLTPNRPSHSACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL", "length": 1126, "header": "tr|F1SD53-1|F1SD53_PIG Isoform 1 of BTB/POZ domain-containing protein 7 OS=Sus scrofa OX=9823 GN=BTBD7 PE=4 SV=1 CANONICAL=F1SD53-1" }, "locus": { "chromosome": "7", "start_pos": 114675635, "end_pos": 114621947, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002732.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002732.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002663.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002663.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q834", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q834" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152664", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152664", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K9E3-1", "protein_name": "BTB/POZ domain-containing protein 7", "gene_name": "Btbd7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDISTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGLFDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLETLIAILKWSSHPYGSKWVHRQALHFLCEELSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPMNSEVLSDAMKRGLISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAMPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGDESPLLTMRQPGRCRVNSTPTAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSHHPSRSFSYPCNHSLFHSRTAPKPGPPPVYLPGVKVAPPDCTNTTALGRQTVAAAAAAAAASAAVISEKQVCPQPVLNDLMPDIAMGVSTLSLKDRRLPELAADTELCQTVSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKPDGRESQQEYPDLYDFPNAACRPSTPAPGRRTPSPSRGRYFGPDLYSHNKASPNGLKSAYLPGQTSPKKQEDTRREYPLSPDGHPHKQKNEPIRLDVVEQPPQRPDFPSAASENASNGPAHVRARTAVETDLTFGLTPNRPPSHSACSSEVLEERSSRRLTDSESLGHGAQRNADLERDDSISRGRRSPSKPDFLYKKSAL", "length": 1129 }, "evidence": [ { "id": "F1SD53", "url": "https://omabrowser.org/oma/group/F1SD53/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X8E7-1", "protein_name": "BTB/POZ domain-containing protein 7", "gene_name": "BTBD7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGANASSYPHSCSPRVGGNPQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASVARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLREEFGTPNSLDVDMRGLFDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYTDMVDLAVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDIEELREILSSLLPFVRIEHILPINSEVLSDAMKRGLISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGDESPLLTMRQSGRCRVNSTPTAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPGVKAAAPDCTNTTGLGRQTVAAAAAAASTTIASEKQVCTQPVLNDLMPDIAMGVSTLSLKDRRLPELAVDTELSQAVSEVGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDARENQQEYPDFYDFSNAACRPSAPAPGRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEETRKEYPLPPDGHPHRQKSEPIHLDVVEQPPQRPDFPLAAPENAGSGSAHVRGRAAVETDLTFGLTPNRPSHSACSSEAPEERSGRRLADESLGHGAQRNTDLEREDSVSRGRRSPSKPDFLYKKSAL", "length": 1125 }, "evidence": [ { "id": "F1SD53", "url": "https://omabrowser.org/oma/group/F1SD53/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5TZA6-1", "protein_name": "BTB/POZ domain-containing protein 7", "gene_name": "btbd7", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVNASSYPHSCSPRFGGNPQTQQTFIGASYAPQGYGGESKLYSLEHGPEKPQDKKKKSSGLATLKRRFIKRRKSSRSADHARQMRELLSGWDVRDVNALVEEYEGTAALKELSLQAGLARPEARTLQRDLATLYQHKYCTDVDLIFQDSCFPAHRAILATRCPFFKTLLSSSPGYGAEVLLDVGTAGMDAPMFSSLLHYLYTGELGSDDARLQNVDVLVRLSEEFGTPNSLEADMRNLCEHMPYFDSLLSFSSDSELVEAFGAGGPAPSSMGSGNIGASHGSPDEELRAHKAVLSARSPFFRNLLQRRIRSGEEITERTLHTPTRIILDESIIPKKYARVVLHCMYTDAVDLSLVLRGSPSEGSLGEVQALVAGRGCMSRAEEAMELYHIALFLEFSMLAQGCEDIVADSISLDSVVAILKWSSQPYGSKWVHRQAMHFLCEEFSQVMTSDVLYELSKEHLLAAIQSDYLQASEQDILKYVVKWGEHQLIKRMADREPNLLSGTAHSVNKRGVKRRDLDLEELKEILSPLLPFVRTEHILPANSEVLSDTMKRGLISTPPSDMLPTAEGGKANAWLRQKSAGIYVRPRLFSPYVEEAKAVLEEMMVEQTDLVRLRMVRMSNVPDTLYMVNNAVPQCCHMINHQQMAGSQSAPPSVVANEIPVPRLAVVKEMIRRLQELRHTDQVQRAFALNCGEGATVSYELQIRVLREFGLPDGAAELLQNPHKFFPEERFGDESPVLALRQSGRCRVNSTPAVESMFTDLEALVGFHPPLPPPPPPYHPPTTPGHGQQQFKAGWRPRVPSQPPSRSFSYPCNHALLHRQASSKMGSPVYPPGAKPLPPDCTNAQGGRNLHPDKQMNMEPVINEFMPDIAMGVSAMTLKERRLPEVSMEVESHEPSHPHLSTAPPMSHSYSNRHPHSSRKRHAAEPKPEGPQPDFPDLYEFPGRHVPPYSGPDLYIHGRQAGGGAPPPSYSEASESLRLDVLEQPPQRLDLAIVSQGSVVQAIQRPRPINETDLTCGLGPSTEQYEEWPTGRRPPPEGIGLGLGANVGTGDEGGLGARDRRSPNKPEYPYRKSAL", "length": 1077 }, "evidence": [ { "id": "F1SD53", "url": "https://omabrowser.org/oma/group/F1SD53/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8CFE5-1", "protein_name": "BTB/POZ domain-containing protein 7", "gene_name": "Btbd7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASLARPEARTLQKDMADLYEDKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDISTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNPLDVDMRGLFDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAIISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYAKVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAVLKWSSHPYGSKWVHRQAVHFLCEELSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDIEELREILSSLLPFVRIEHILPINSEVLSDAMKRGLISTPPSDMLPTAEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVSNAMPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGDESPLLTMRQPGRCRVNSTPTAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSHHPSRSFSYPCNHSLFHCRTAPKPGPPPVYLPGVKVAPPDCTNTTGLGRQTVAAAAAAAAASAAIIPEKQVCPQPVLNDLMPDIAMGVSTLSLKDRRLPELAADTELCQTVSEAGTGPPQHLSCIPQRHTNTSRKKPTLEQKADGRENQQEYPDLYDFSNAACRPSTPAPGRHSPSPAHGRYFGPDLYSHNKASPNGLKSVYLPGQTSPKKQEDPRREYPPSPDGHPHRQKREPIRLDVVEQPPQRPDFPSAASENASHGPAHVRARTAVETDLTFGLTSNRPPSHSACSSEVLEERSSRRLTDSEPLGHGAHQRNADLERGDSISRGRRSPSKPDFLYKKSAL", "length": 1130 }, "evidence": [ { "id": "F1SD53", "url": "https://omabrowser.org/oma/group/F1SD53/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P203-1", "protein_name": "BTB/POZ domain-containing protein 7", "gene_name": "BTBD7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGANASNYPHSCSPRVGGNSQAQQTFIGTSSYSQQGYGCESKLYSLDHGHEKPQDKKKRTSGLATLKKKFIKRRKSNRSADHAKQMRELLSGWDVRDVNALVEEYEGTSALKELSLQASLARPEARTLQKDMADLYEYKYCTDVDLIFQETCFPVHRAILAARCPFFKTLLSSSPEYGAEIIMDINTAGIDMPMFSALLHYLYTGEFGMEDSRFQNVDILVQLSEEFGTPNSLDVDMRGLFDYMCYYDVVLSFSSDSELVEAFGGNQNCLDEELKAHKAVISARSPFFRNLLQRRIRTGEEITDRTLRTPTRIILDESIIPKKYATVILHCMYTDVVDLSVLHCSPSVGSLSEVQALVAGKPNMTRAEEAMELYHIALFLEFNMLAQGCEDIIAESISLDTLIAILKWSSHPYGSKWVHRQALHFLCEEFSQVMTSDVFYELSKDHLLTAIQSDYLQASEQDILKYLIKWGEHQLMKRIADREPNLLSGTAHSVNKRGVKRRDLDMEELREILSSLLPFVRIEHILPINSEVLSDAMKRGLISTPPSDMLPTTEGGKSNAWLRQKNAGIYVRPRLFSPYVEEAKSVLDEMMVEQTDLVRLRMVRMSNVPDTLYMVNNAVPQCCHMISHQQISSNQSSPPSVVANEIPVPRLLIMKDMVRRLQELRHTEQVQRAYALNCGEGATVSYEIQIRVLREFGLADAAAELLQNPHKFFPDERFGDESPLLTMRQPGRCRVNSTPPAETMFTDLDSFVAFHPPLPPPPPPYHPPATPIHNQLKAGWKQRPPSQHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAAAAATTTSTATAAAAAASEKQVRTQPVLNDLMPDIAVGVSTLSLKDRRLPELAVDTELSQSVSEAGPGPPQHLSCIPQRHTHTSRKKHTLEQKTDTRENPQEYPDFYDFSNAACRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGLKSAYLPGQTSPKKQEEARREYPLSPDGHLHRQKNEPIHLDVVEQPPQRSDFPLAAPENASTGPAHVRGRTAVETDLTFGLTPNRPSLSACSSEAPEERSGRRLADSESLGHGAQRNTDLEREDSISRGRRSPSKPDFLYKKSAL", "length": 1132 }, "evidence": [ { "id": "F1SD53", "url": "https://omabrowser.org/oma/group/F1SD53/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "morphogenesis of a branching epithelium", "id": "GO:0061138", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061138", "evidence": [ { "database": "UniProtKB", "id": "F1SD53", "url": "https://www.uniprot.org/uniprotkb/F1SD53" } ], "pmid": "" }, { "name": "regulation of branching involved in salivary gland morphogenesis", "id": "GO:0060693", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060693", "evidence": [ { "database": "UniProtKB", "id": "F1SD53", "url": "https://www.uniprot.org/uniprotkb/F1SD53" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SD53", "url": "https://www.uniprot.org/uniprotkb/F1SD53" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 363, "end_pos": 365, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4, "end_pos": 6, "annotation": "n_glycosylation_sequon" }, { "start_pos": 634, "end_pos": 636, "annotation": "n_glycosylation_sequon" }, { "start_pos": 736, "end_pos": 738, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" }, { "start_pos": 798, "end_pos": 800, "annotation": "n_glycosylation_sequon" }, { "start_pos": 829, "end_pos": 831, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SD53", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD53" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 142, "end_pos": 211, "start_aa": "Thr", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 363, "end_pos": 365 }, { "start_pos": 4, "end_pos": 6 }, { "start_pos": 634, "end_pos": 636 }, { "start_pos": 736, "end_pos": 738 }, { "start_pos": 77, "end_pos": 79 }, { "start_pos": 798, "end_pos": 800 }, { "start_pos": 829, "end_pos": 831 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SK66-1", "uniprot_ac": "F1SK66", "uniprot_id": "F1SK66_PIG", "mass": { "chemical_mass": 47695.0, "monoisotopic_mass": 47695.0 }, "refseq": {}, "gene_names": [ { "name": "CADM2", "type": "recommended", "evidence": [ { "id": "F1SK66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ] } ], "protein_names": [ { "name": "Cell adhesion molecule 2", "type": "recommended", "evidence": [ { "id": "F1SK66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK66/entry#names_and_taxonomy" } ] }, { "name": "Immunoglobulin superfamily member 4D", "type": "synonym", "evidence": [ { "id": "F1SK66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK66/entry#names_and_taxonomy" } ] }, { "name": "Nectin-like protein 3", "type": "synonym", "evidence": [ { "id": "F1SK66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK66/entry#names_and_taxonomy" } ] }, { "name": "Synaptic cell adhesion molecule 2", "type": "synonym", "evidence": [ { "id": "F1SK66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK66/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Adhesion molecule that engages in homo- and heterophilic interactions with the other nectin-like family members, leading to cell aggregation. Important for synapse organization, providing regulated trans-synaptic adhesion. Preferentially binds to oligodendrocytes.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAH4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAH4#function" }, { "database": "UniProtKB", "id": "ARBA00054177", "url": "https://www.uniprot.org/uniprotkb/ARBA00054177#function" }, { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CADM2", "url": "https://www.uniprot.org/uniprotkb/F1SK66", "locus": { "chromosome": "13", "start_pos": 169688958, "end_pos": 170014005, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011999", "url": "https://www.ensembl.org/id/ENSSSCG00000011999" } ] } } ], "crossref": [ { "id": "F1SK66", "url": "https://alphafold.ebi.ac.uk/entry/F1SK66", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011999", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011999", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd05884", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05884", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd07701", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07701", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003585", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003585", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013162", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013162", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CEVFHET", "url": "https://omabrowser.org/oma/group/CEVFHET/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45889", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45889", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45889:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45889:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08205", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08205", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-418990", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-418990", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QAH4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAH4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAH4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAH4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK66-1", "url": "https://www.uniprot.org/uniprotkb/F1SK66-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFVLFFLCNLSLVPAAASKNKVKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSNIRDPNALAGQAGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI", "length": 438, "header": "tr|F1SK66-1|F1SK66_PIG Isoform 1 of Cell adhesion molecule 2 OS=Sus scrofa OX=9823 GN=CADM2 PE=1 SV=3 CANONICAL=F1SK66-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QAH4-1", "url": "https://www.uniprot.org/uniprotkb/F1SK66/entry#A0A5G2QAH4-1", "sequence": { "sequence": "MQDQGKLMIIMLLLKYKSLCVPRRKRSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSNIRDPNALAGQAGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI", "length": 440, "header": "tr|A0A5G2QAH4-1|F1SK66_PIG Computationally mapped isoform of Cell adhesion molecule 2 OS=Sus scrofa OX=9823 GN=CADM2 PE=1 SV=2 CANONICAL=F1SK66-1" }, "locus": { "chromosome": "13", "start_pos": 169943476, "end_pos": 169689485, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079568.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079568.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061006.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061006.2" } ] } }, { "isoform_ac": "F1SK66-1", "url": "https://www.uniprot.org/uniprotkb/F1SK66/entry#F1SK66-1", "sequence": { "sequence": "MFVLFFLCNLSLVPAAASKNKVKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSNIRDPNALAGQAGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI", "length": 438, "header": "tr|F1SK66-1|F1SK66_PIG Isoform 1 of Cell adhesion molecule 2 OS=Sus scrofa OX=9823 GN=CADM2 PE=1 SV=3 CANONICAL=F1SK66-1" }, "locus": { "chromosome": "13", "start_pos": 170013806, "end_pos": 169689485, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013130.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013130.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012784.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012784.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAH4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAH4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-418990", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-418990", "resource": "Reactome", "description": "Adherens junctions interactions" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y057-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "CADM2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLKPGALLRFYSLCGILIQVAATKNKARGSQGQFPLTQNVTVVEGGTANLTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAFLTVLGVPEKPQITGFTSPVMEGERMQLTCKTSGSKPAADIRWFKNDKEVKDVKYLKEEDANRKTFTVSSTMDFLADRNDDGAVISCRVDHESLNSTPQIAMQVLEIHYTPLVKIISSNSWPEEGQSIILTCESKGKPVPEPVLWTKDGGELPDPERMVVNGRVLSISFLNKTDNGTYRCEAKNPIGRNSTEYVLIVHDVFNTLLPTTVIPSLTTATVTTTVALTASTTTSATAISTRDPNALAGQTGPDHALIGGIVAVVVFVTLCSIILLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI", "length": 444 }, "evidence": [ { "id": "F1SK66", "url": "https://omabrowser.org/oma/group/F1SK66/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MEW6-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "CADM2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLVLFLCNLALVPAAASKNKVKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTCPTTSATTSSIRDPNALAGQTGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI", "length": 437 }, "evidence": [ { "id": "F1SK66", "url": "https://omabrowser.org/oma/group/F1SK66/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8BLQ9-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "Cadm2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIWKRSAVLRFYSVCGLLLQGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQALTLTCESKGKPLPEPVLWTKDGAELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTAPVTTSVTITTSPSTSASSSSRRDPNSLAGQNGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI", "length": 435 }, "evidence": [ { "id": "F1SK66", "url": "https://omabrowser.org/oma/group/F1SK66/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N3J6-1", "protein_name": "Cell adhesion molecule 2", "gene_name": "CADM2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MIWKRSAVLRFYSVCGLLLQGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTIIPSLTTATVTTTVAITTSPTTSATTSSIRDPNALAGQNGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI", "length": 435 }, "evidence": [ { "id": "F1SK66", "url": "https://omabrowser.org/oma/group/F1SK66/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ], "pmid": "" }, { "name": "neuronal cell body membrane", "id": "GO:0032809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032809", "evidence": [ { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "homophilic cell adhesion via plasma membrane adhesion molecules", "id": "GO:0007156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007156", "evidence": [ { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ], "pmid": "" }, { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "F1SK66", "url": "https://www.uniprot.org/uniprotkb/F1SK66" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 214, "end_pos": 216, "annotation": "n_glycosylation_sequon" }, { "start_pos": 290, "end_pos": 292, "annotation": "n_glycosylation_sequon" }, { "start_pos": 294, "end_pos": 296, "annotation": "n_glycosylation_sequon" }, { "start_pos": 34, "end_pos": 36, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" }, { "start_pos": 9, "end_pos": 11, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SK66-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 438, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SK66-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SK66" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SK66", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK66" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 14, "end_pos": 122, "start_aa": "Pro", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 214, "end_pos": 216 }, { "start_pos": 290, "end_pos": 292 }, { "start_pos": 294, "end_pos": 296 }, { "start_pos": 34, "end_pos": 36 }, { "start_pos": 54, "end_pos": 56 }, { "start_pos": 9, "end_pos": 11 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SC29-1", "uniprot_ac": "F1SC29", "uniprot_id": "F1SC29_PIG", "mass": { "chemical_mass": 167732.0, "monoisotopic_mass": 167732.0 }, "refseq": { "ac": "XP_013839085", "name": "zinc finger protein 518A", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013839085" }, "gene_names": [ { "name": "ZNF518A", "type": "recommended", "evidence": [ { "id": "F1SC29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ] }, { "name": "ZNF518A", "type": "synonym", "evidence": [ { "id": "XP_013839085", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013839085" } ] } ], "protein_names": [ { "name": "Zinc finger protein 518A", "type": "recommended", "evidence": [ { "id": "F1SC29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC29/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 518A", "type": "synonym", "evidence": [ { "id": "XP_013839085", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013839085" } ] } ], "function": [ { "annotation": "Through its association with the EHMT1-EHMT2/G9A and PRC2/EED-EZH2 histone methyltransferase complexes may function in gene silencing, regulating repressive post-translational methylation of histone tails at promoters of target genes.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBZ9#function" }, { "database": "UniProtKB", "id": "ARBA00054986", "url": "https://www.uniprot.org/uniprotkb/ARBA00054986#function" }, { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF518A", "url": "https://www.uniprot.org/uniprotkb/F1SC29", "locus": { "chromosome": "14", "start_pos": 107619768, "end_pos": 107590598, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010503", "url": "https://www.ensembl.org/id/ENSSSCG00000010503" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010503", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010503", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153530", "url": "https://www.ncbi.nlm.nih.gov/gene/100153530", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153530", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153530", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SCVEECM", "url": "https://omabrowser.org/oma/group/SCVEECM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SC29", "url": "https://www.orthodb.org/?gene=F1SC29", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379:SF121", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379:SF121", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_013839085", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013839085", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QBZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBZ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBZ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SC29-1", "url": "https://www.uniprot.org/uniprotkb/F1SC29-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPSEQKHLFFDEKQNTLKKDYDVKNEIVDTVRSVLKPKISESHFHYELKNVKIVLPRINIPNEVLLKHEVDKYRKLFQHKPQTARKSISIKTVNCIEECVLLHKSERVEEGIKMSAKILNFNCLKCRDSTRYSPNDLQKHFQMWHHGELPSYPCEMCSFSANDFQVFKQHRRTHRITLVKCDICNNENLYTLLDLTKHFSSTHCVNGNFQCEKCEFSTQDVGTFVQHIHRHNEVLYKCDKCHYICLTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLIRHVITLHKEHLYAKEKLEKDKYEKRMAKTSTGLKLILKRYKIGASRKTFWKRKKINNGSDRSIEKNTQVLKKVNKTQAKSEDQSRLVQEHINEEKDERLYCENNDKPAESESEKPTLLSTGQCNRAEEGSNSTTGFLKTALQGPTVLMVKNNRITIPANYSAKFMGFKMVDGKQHIVIKLLPTSKQNLYLPGSQSGATRHSTANLQPQTLDTTAFLTGVTTELNDTIYMKASTPFSCSSPIRSGKVTSEKEVALLSQTSNMLPTMDDEKSVSSLPTTSELITASVNLTTKVETRDNVDLWGSHIAQCHPEVSGTAIKSPDKVTCTVKPNPYSSGDMHNYCINYVNSELPVESSNQGSLPFHNYSKVNNSNKRRRFSGTATCENPQKESSLSKTVVQQPISESVLSLVRKESSNPDSLLASISLLNTKDGTLKTQAEMEEQCVLEKGQNIDGQNLYTNENQNLESLTEKPKWDDISSDESPMMPRITSVFSLQSQQASEFLPPEVNQLLQEVLKAKPDVKQDSSNTPSKDLRLHCDQSFQKHEREDKIVECSKDLKGQGLFPVPSCSMGINGPTNDPNLKCGGKEKQMLSMSQDVRDSEKTPRISGFGTLLKTQSDAIITQQLVKDKLRATTQNLGSLYMQSPLLNSEPKKALFVQTPRGFFVPLHIANKPGLHASGKPLPLVNTQGVPASLLLNKKPGMILTFNNGKLEGVSAVKTESAQACGTTTKEPCRPPILKVEPSSNCLTPALCSSIGSCLSMKSSSENTLSLKGPYIIKTPASSSVKAVPTPNTVSEHQGTKLNISDSVKQQNKIFPKPPLYTLLPDGKQAVFLKCVMPNKTELLKPKLVQNSTYYKNIQPKKPEGTPQKILLKIFNPVLNVTAANNLSVSNSASSASSSQKDNVPSHPATGGEQKEPESSRDALPFLLDDMMPANEIVITSTATCPESSEEPVCITDHSEARVLRRKTNCTIERCVNKKKTLKKNFSRIKTHLRSKDSETAFVSRNRNCKRKCRDSYQEPPRKKALHRKCKEKAKPEDISESFGYSKPRLSKDSVRTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADAPEVVNVMKTIAKFNGRVLKVSLSKRTINALLKPVCCNSSKTICDDFPKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTTSENVLKAKFNCWFCGRVFDNQDTWAGHGQRHLMEATRDWNMLE", "length": 1491, "header": "tr|F1SC29-1|F1SC29_PIG Isoform 1 of Zinc finger protein 518A OS=Sus scrofa OX=9823 GN=ZNF518A PE=3 SV=1 CANONICAL=F1SC29-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QBZ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SC29/entry#A0A5G2QBZ9-1", "sequence": { "sequence": "MPSEQKHLFFDEKQNTLKKDYDVKNEIVDTVRSVLKPKISESHFHYELKNVKIVLPRINIPNEVLLKHEVDKYRKLFQHKPQTARKSISIKTVNCIEECVLLHKSERVEEGIKMSAKILNFNCLKCRDSTRYSPNDLQKHFQMWHHGELPSYPCEMCSFSANDFQVFKQHRRTHRITLVKCDICNNENLYTLLDLTKHFSSTHCVNGNFQCEKCEFSTQDVGTFVQHIHRHNEVLYKCDKCHYICLTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLIRHVITLHKEHLYAKEKLEKDKYEKRMAKTSTGLKLILKRYKIGASRKTFWKRKKINNGSDRSIEKNTQVLKKVNKTQAKSEDQSRLVQEHINEEKDERLYCENNDKPAESESEKPTLLSTGQCNRAEEGSNSTTGFLKTALQGPTVLMVKNNRITIPANYSAKFMGFKMVDGKQHIVIKLLPTSKQNLYLPGSQSGATRHSTANLQPQTLDTTAFLTGVTTELNDTIYMKASTPFSCSSPIRSGKVTSEKEVALLSQTSNMLPTMDDEKSVSSLPTTSELITASVNLTTKVETRDNVDLWGSHIAQCHPEVSGTAIKSPDKVTCTVKPNPYSSGDMHNYCINYVNSELPVESSNQGSLPFHNYSKVNNSNKRRRFSGTATCENPQKESSLSKTVVQQPISESVLSLVRKESSNPDSLLASISLLNTKDGTLKTQAEMEEQCVLEKGQNIDGQNLYTNENQNLESLTEKPKWDDISSDESPMMPRITSVFSLQSQQASEFLPPEVNQLLQEVLKAKPDVKQDSSNTPSKDLRLHCDQSFQKHEREDKIVECSKDLKGQGLFPVPSCSMGINGPTNDPNLKCGGKEKQMLSMSQDVRDSEKTPRISGFGTLLKTQSDAIITQQLVKDKLRATTQNLGSLYMQSPLLNSEPKKALFVQTPRGFFVPLHIANKPGLHASGKPLPLVNTQGVPASLLLNKKPGMILTFNNGKLEGVSAVKTESAQACGTTTKEPCRPPILKVEPSSNCLTPALCSSIGSCLSMKSSSENTLSLKGPYIIKTPASSSVKAVPTPNTVSEHQGTKLNISDSVKQQNKIFPKPPLYTLLPDGKQAVFLKCVMPNKTELLKPKLVQNSTYYKNIQPKKPEGTPQKILLKIFNPVLNVTAANNLSVSNSASSASSSQKDNVPSHPATGGEQKEPESSRDALPFLLDDMMPANEIVITSTATCPESSEEPVCITDHSEARVLRRKTNCTIERCVNKKKTLKKNFSRIKTHLRSKDSETAFVSRNRNCKRKCRDSYQEPPRKKALHRKCKEKAKPEDISESFGYSKPRLSKDSVRTLRLFPFSSKQLVKCPRRNQPK", "length": 1355, "header": "tr|A0A5G2QBZ9-1|F1SC29_PIG Computationally mapped isoform of Zinc finger protein 518A OS=Sus scrofa OX=9823 GN=ZNF518A PE=3 SV=1 CANONICAL=F1SC29-1" }, "locus": { "chromosome": "14", "start_pos": 107616187, "end_pos": 107612086, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068131.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068131.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061043.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061043.2" } ] } }, { "isoform_ac": "F1SC29-1", "url": "https://www.uniprot.org/uniprotkb/F1SC29/entry#F1SC29-1", "sequence": { "sequence": "MPSEQKHLFFDEKQNTLKKDYDVKNEIVDTVRSVLKPKISESHFHYELKNVKIVLPRINIPNEVLLKHEVDKYRKLFQHKPQTARKSISIKTVNCIEECVLLHKSERVEEGIKMSAKILNFNCLKCRDSTRYSPNDLQKHFQMWHHGELPSYPCEMCSFSANDFQVFKQHRRTHRITLVKCDICNNENLYTLLDLTKHFSSTHCVNGNFQCEKCEFSTQDVGTFVQHIHRHNEVLYKCDKCHYICLTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLIRHVITLHKEHLYAKEKLEKDKYEKRMAKTSTGLKLILKRYKIGASRKTFWKRKKINNGSDRSIEKNTQVLKKVNKTQAKSEDQSRLVQEHINEEKDERLYCENNDKPAESESEKPTLLSTGQCNRAEEGSNSTTGFLKTALQGPTVLMVKNNRITIPANYSAKFMGFKMVDGKQHIVIKLLPTSKQNLYLPGSQSGATRHSTANLQPQTLDTTAFLTGVTTELNDTIYMKASTPFSCSSPIRSGKVTSEKEVALLSQTSNMLPTMDDEKSVSSLPTTSELITASVNLTTKVETRDNVDLWGSHIAQCHPEVSGTAIKSPDKVTCTVKPNPYSSGDMHNYCINYVNSELPVESSNQGSLPFHNYSKVNNSNKRRRFSGTATCENPQKESSLSKTVVQQPISESVLSLVRKESSNPDSLLASISLLNTKDGTLKTQAEMEEQCVLEKGQNIDGQNLYTNENQNLESLTEKPKWDDISSDESPMMPRITSVFSLQSQQASEFLPPEVNQLLQEVLKAKPDVKQDSSNTPSKDLRLHCDQSFQKHEREDKIVECSKDLKGQGLFPVPSCSMGINGPTNDPNLKCGGKEKQMLSMSQDVRDSEKTPRISGFGTLLKTQSDAIITQQLVKDKLRATTQNLGSLYMQSPLLNSEPKKALFVQTPRGFFVPLHIANKPGLHASGKPLPLVNTQGVPASLLLNKKPGMILTFNNGKLEGVSAVKTESAQACGTTTKEPCRPPILKVEPSSNCLTPALCSSIGSCLSMKSSSENTLSLKGPYIIKTPASSSVKAVPTPNTVSEHQGTKLNISDSVKQQNKIFPKPPLYTLLPDGKQAVFLKCVMPNKTELLKPKLVQNSTYYKNIQPKKPEGTPQKILLKIFNPVLNVTAANNLSVSNSASSASSSQKDNVPSHPATGGEQKEPESSRDALPFLLDDMMPANEIVITSTATCPESSEEPVCITDHSEARVLRRKTNCTIERCVNKKKTLKKNFSRIKTHLRSKDSETAFVSRNRNCKRKCRDSYQEPPRKKALHRKCKEKAKPEDISESFGYSKPRLSKDSVRTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADAPEVVNVMKTIAKFNGRVLKVSLSKRTINALLKPVCCNSSKTICDDFPKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTTSENVLKAKFNCWFCGRVFDNQDTWAGHGQRHLMEATRDWNMLE", "length": 1491, "header": "tr|F1SC29-1|F1SC29_PIG Isoform 1 of Zinc finger protein 518A OS=Sus scrofa OX=9823 GN=ZNF518A PE=3 SV=1 CANONICAL=F1SC29-1" }, "locus": { "chromosome": "14", "start_pos": 107616558, "end_pos": 107612086, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076853.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076853.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067489.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067489.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBZ9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153530", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153530", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B2RRF6-1", "protein_name": "Zinc finger protein 518A", "gene_name": "Znf518a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPFEQTQLFCDEKPTILKKLDTRNEIADTIRSVSTSKISETSFQYVLKDVNICLPKINIPNEILMKHEVEKYRLLFQSKPQTARKSISVKTVSCAEECVLLCKSERAEDETVNMSAKILNFSCSKCQDSTQYSPNDLQKHFEMWHHGELPSFPCEMCSFSASDFQIFKQHRKTHRNTFVKCDICNSERSYTLLDLTKHFTSKHCVNGNFQCEECRFFTQDVGTFVQHIHRHKEVHYKCGKCHHLCFTKGELQKHLRVHSGTLPFTCHYCSYGAIHKDQLIRHVITLHKEHLYAKEKLERDQYDKRVAKTTTTGLKLILKRYKIGPTKTFWKRKTITSGNDESIGKNAQAFNIVSKTQTKSEDQSQEQVNGEKGEKQHCENGDKPVESESEKATVLSTGQYNKADEGASTTSSSVLSAVQGPTVLLVRNNKITIPANYSAKFMGFKMVDGRQHIVIKLLPANKQILPSPVLQSNTEKNSTANLSPQAVANTGFATGLTTKVNDTDFVKAAPPACSSPVLARKVISEKEAAFISEKNNTLQMVDDSKSLSSLPTTSTTSVRVTTKVEARDNVDLWENDSPQSHPDASDTSISSPDKVSLTPKPNAYSSGDMHNYCINYVNSELPAESSNSFEFSNQGSLPFHNYSKVNNKRRRFSRATLCENLQKESPNKTVTQQSTSDSDTASPLLRKESSNSDNLFASINPLNGTLKIKTEIEEPYNLEETQNFNEQSLFTNENQNLLNVTEEPKWNDIPSAGSPMMPRITSVFSLQSEQASEFLTPEVNQLLQDTLKPKSDIKEDSNNIPSKNLPFDCDQTLKKSEEVVIKSSKDFQMQDDIPVPSASVGVNVPANDLNSKCNGQEKQGLSVLQDVRDSEVTTKIPNIITLLKTQSDAIITQQLVKDKLRTTTQNSGPVYVQNPFLTSEQKNPVFVQTPKGFIIPLHVANKPGLHVFSGRPVPLVNTRSVPATLLVNKKPGMLLATNNGKPESVPTVKTENVHSYGTVTKEPCKTPFLKAEHNNSCLTPGLCSSIGNCVNMKTCSENTLPLKGSYIIKTSVNSSVKAVPNILPEQQGPKMNILDTVKQQNENLPKASLYTLMPDGKQAVFFKCVMPNNTKLLKPKLVQSSTYQHIQPKRPAGAPQKILVKIFNPVLSMSAFNNLSASNSASSFQKEIVPSKPTVHGEQKEPETSRNALPVLVHGLMPANETVHSSTTACPGSSEEPVYISERSETRVLRGKANCAVERNFNKRKTCKNKFAKIKTRIDQDSETAFVSRNRSCKRKYIDNYQEPPRKKSTLNRKGKERASAEDVQEAFGFSRPRLPKDSSRTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADTPEVERVMKTIAKFNGHVLKVSLSQTTINALLKPVSNTSETTYNDFSKRQKMLKPVNSVKERFVLKLTLKKTSKNNYQIVKTTSEDVLKSQFNCWFCGRVFDNQDVWAGHGQRHLVEATRDWNMLE", "length": 1478 }, "evidence": [ { "id": "F1SC29", "url": "https://omabrowser.org/oma/group/F1SC29/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1BG18-1", "protein_name": "Zinc finger protein 518A", "gene_name": "ZNF518A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPSEQKHLFFDEKQNTLKKDYDVKNEVVDSLRSKISEPKFQNQLKPNISESSFHYGLKNVKIVLPKIHIPNEVLLKHEVDKYRKLFQHKPQTARKSINVKTVSSVEECMLLHQSERVDEGIKMSAKILNFSCLKCRDSTRYSPNDLQKHFQMWHHGELPSYPCEMCSFSANDFQVFKQHRRTHRITLVKCDICNNENLYTLLDLTKHFSSTHCVNGTFQCEKCEFSTQDVGTFVQHIHRHNEILYKCGKCHYICLTKGELQKHLYIHSGTFPFTCQYCSYGATRREHLVRHVITLHKEHLYAKEKLEKDKYEKRMAKSSAGLKLILKRYKIGASRKTFWRRKKVNNASDRSIEKNTQVLKKVNRTQATSEDPGHLVQEHVNEEKHERLYCENNDKPAESELGKPTLVSTGQCNGAQEGSNSTSGFLKTAVQGPTVLMVKNNRITIPANYSAKFMGFKMVDGKQHIVIKLLPTTKPNPCVPGSQSGAARDSTAVLQPQTLDATAFLTGVPAELNDTVCMKAAPPFSSSSPVLSGKVISEKEMALLSQTSNIIPAVDDEKGVSPSPVESDLITASVNLTTKVETRDNVDLWGSHITQCHPEVLGTTVKSPDKVSCTAKPNSYNSGDMHNYCINYINSELPVESSSQGSLPFHNYSKVNNSNKRRRFSGTAMCENPQRESSSSKTVLSESVLSPVKKESSNPDSRLASISLLNSKDGTLKTQAEIEEQCVLEKGQNIDGQNLYTNENKSSESMTEKPKWDGISNVESPMMPRITSVFSLQSQQASELLPPELNQLLLDVLKAKPDVKQDSSNIPDKDVPLQCAQSFQEHGGENKIVESSKDLKVQGLFPIPSGSMGTSRPTDDLNLNCSGKEKQLLSQDVRDSKTPRSFGFGTLPKTQSDAIITQQLVKDKLRATTHSFYVHNPLNSEPRKAVFVQTPKCFLVPMHFTNKPRFHVSRRPLVNTQGIPAPLLLNKKPGMILTFNNGKLEGVSAVKTESAQACGTTTKEPCRAPFLKVEQNSNCLTPALCSSIGSCVSMKSSPENTLSFKGPYIIKTPANSSVKAVPTHIIPEHQGTKLNISDSVKPQNKIFPKPPLYTFLPDGKQAVFLKCVMPNKTELLKPKLVQNSTCLKNIQPKKPEGTPQKILLKIFNPVLNVTAASNLSVSNTGSSLQKDSVPSNQTTGQQKEPESSRDALPFLLDDMMPANEIVITSTATCPESSEEPICITDHSEARVLRCKTNCTIERNFNKKNTSKRKVSRIKNHVRSQDSETAFVSRSRNCKRKCRDSYQEPPRKKALHRKCKEKAKPESIPESFEFNRPRLSKDTVRTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADSPEVVNVMKTVAKFNGRVLKVSLSKRTIDALLKPVCCNPSETTYDDFPKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTTSENTLKAKFNCWFCGRVFDNQDAWAGHGQRHLMEATRDWNMLE", "length": 1482 }, "evidence": [ { "id": "F1SC29", "url": "https://omabrowser.org/oma/group/F1SC29/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BXZ2-1", "protein_name": "Zinc finger protein 518A", "gene_name": "ZNF518A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSEQDQFSHDKKQINLLKHDAANNLCMDTSLENALVNDPLNMTTRPAVLNVNFSCELKNVKIDLPKVNIPNEVLMKHEIDKFRKLFQCKQQTARKSLTLEKVNVSSPDCSEGSQVQNKIEVQFGKGLKTTAKILHFTCTKCEDNVRYSPNDLQKHFQLLHSGELPVYPCEMCNFSANDFQAFNQHRRTHRSTLVKCELCLDEQMYTLLDLTKHFTSKHCVNGHFQCEKCGFSTQDVGTFVQHIHRHNGITYECGKCHHISYTEEEFQRHNLVHSSLILFRCQFCSYSTPRKDYILRHLIALHRDHLCAKEKLERDKFEKRILKTPAALKLVLRRYKTGTSKKPLWRRKKIIGASDKTGEKNSQVLRIVNKIQPKLDELNQYMKVVEANEEKDQIPCTEKNFTGGIHAATTAQYNKADDGMRFSLGSLKNTVHGPAVLMIKNNKISVPANYSAKFMGFKIVDGKQHIVIKLLPTNKQNLHLLGQKADPIKDGSTPPLLQTADPCSLSSGAIPHVTDQSTFKNKSIHPLTSVFSSAPHSGKAKVEKQNNSLLYGRSVSQTVAPSNVAVGKNSYNLPMKLGSPVSPHDEVTKIGTQNNISWRNYSPPSHPQVLSPPVTNTLCYDPWKIPFFPELKIQNGGLNNNHRTNNLYYSPSVDSSNEGLLSFHNYSKTDTLDNQCGVWMSTDDKSKEFISSQTVNFQNSDESASSYSESVKDLKPENTVSAQSNIKTYEHINTKNNGMSPSSQSKCGIDREYFVEDQHNGQQYLDTNLYQDLMSTAEEFQENGSDCVNSVLMPKITSVFSLQSEQAANYLSPEINQLLQDVLKVNATPQQESHCKLNNCVELHSDKLLSSQEKGNRAFTRSKNSATTCSFQRPSTNVDFHLCKRELNTRCSMHEGMHCGEERKTPRTYLDSQGMEMVCRTADGASLKDDTDAIITQQLVKDKMQSTSSNPTSFSPILQEQKKTLLVQPPPSRFFVPLQLANQPGLQVVSGKPHLSPSSSDGHATKGVPTSFALNKGPGMILTFSGSIGAVANVPSDSPQVLGRVASREYGKITIPASKVEGKNDSFRSVRSCCSRRTCSAANDSLNSMSSKGPLVVTNLAESSVKGISSVKASSEHQDAVFGSEESTEQKEMKQKQHVYAFLPDGQQAVFLKYMTPNKPVVHKHSVFQDNAHYQNCQPKKTGVMQQKLLLKIKTSDMLAETNQSVNNSVPSVQLDSVQSLTPALAQKQTDLTSNDALILPGRLMPANASLASSNPACCIPSVEPVYCTRTAGSWLQKGFVESTQIITANRNNFGSQKSSWSTQNRIAKVKPRLKQSGPKSSETVLLQRNKNFKRKNKDNCKEPPRKKVTLHRKCKEKNRGEVISESGGHYKQRASKDTVRTLKLLPFNSKQLVKCPRRNQPVVVLNHPDADVPEVVNVMKTIAKFKGHVLKVSLSKRTIEALEPAFCNHLDITTDNLFQKRHRTIKPISPVKERFVLKLTLKKTSKNNYQIVKTTSDNTLKAKFSCWFCGRIFDNQDNWVGHGQRHLMEATRDWNLLV", "length": 1540 }, "evidence": [ { "id": "F1SC29", "url": "https://omabrowser.org/oma/group/F1SC29/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q499R0-1", "protein_name": "Zinc finger protein 518A", "gene_name": "Znf518a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPFEQTQLFCDEKQTILKKIDTRNEIPDTIKSIPIPKISEAGFHYEPKNVNICLPKINIPNEILMKHEVEKYRKLFQSKPQTARKSVSVRTVSCAKGCAQRCESERAEDEAGKMCAKILNFTCSKCQDRTQYSPNDLQKHFEMWHHGELPSFPCEMCSFSASDFQIFKQHRKTHRNTFVKCDICNSERSYTLLDLTKHFTSKHCVNGNFQCEECRFFTQDVGTFVQHIHRHKEVHYKCGKCHHLCFTKGELQKHLRVHSGTLPFTCHYCSYGAIHKDQLVRHVITLHKEHLYAKEKLERDQYDKRVAKTTTGLKLILKRYKIGPTKTFWKRKTIASGNDESIGKNAQAFNIVSKTQTKSEDQSQEQLNEEKGGRQHCEDGDKPIESGSEKATVLSTGQCNKADEGASAPSSVLSAVQGPTVLLVRNNKITIPANYSAKFMGFKMVDGRQHIVIKLLPANKQILPSPALQPNTEKESTANLPPQAMDNTGFATGLTAMNDTDFVKAAPLSCSSPELPRKVISEKETAFISEKNNMLQMVDDSKSVTSLPTPSESVTSVRLTTKVEARDNVDLWENPSTQSHPDLIGTSINSPDKVNLTIRPNAYSCGDMHNYCINYVNSELPAESSNCFEFSNQGSLPFHNYSKVNNKRRRFSRGAVCENLQRESSNKTVTQQSTSDSDTTSPLRKESSNSDSLLASISPLSGTLKIKTEIEEPCDLEETQNFNEQSLFTNENQNLLNMTEEPKWDDIPCAGSPMMPRITSVFSLQSEQASEFLPPEVNQLLQDTLKPRSDIKEDSNNIPSKNLPLDCDQTLKKSKEEVIKSSKDFQMQDIISVPSASVGVNVPANDLNLKCNGQEKQALSVLQDVRDPGVTTKIPSIITLLKTQSDAIITQQLVKDKLRTTTQHSGPVYVQNPLLTSEQKNPVFVQTPKGFIIPLHVANKPGLHVFSGRPVPLVNTQSVPAALLVNKKPGVVLTVNNGKPEGVPTVKTENVHSYGTVTKEPCRTPFLKAEHNRYCLTPGLCSSIGSCVNMKTCSENTLPLKGSYIIKTSVSSSVKAVPFANVLPEQQGPNVNVLDAVKQQNESLPKASLYTLMPDGKQAVFFKCMMPNNTKLLKPRLVQNSTYQRIQPKRPAGAPQKILLKIFNPVLSMSAVNNLSVGNSASSFQKEIVPSKPTVHGEQKVPQSSRDALPVSVQDLMPANEAVLSSTAACPGSSEEPVHISERSETRVSRSKANCTIERNFNKRKTCKNKFAKIKTRISQDSETAFVSRNRSCKRKYIDNYQEPPRKKSATHRKCKERANAEDVQETFGFSRPRLPKDSGRTLRLFPFNSEQLVKCPRRNQPVVVLNHPDADAPEVERVMKTITKFNGRVLKVSLSKATINALLKPVSITSETTYSDFSKRHKMLKPVNSVKERFVLKLTLKKTSKNNYQIVKTTSEDVLKSKFNCWFCGRVFDNQDVWAGHGQRHLVEATKDWNMLE", "length": 1478 }, "evidence": [ { "id": "F1SC29", "url": "https://omabrowser.org/oma/group/F1SC29/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6AHZ1-1", "protein_name": "Zinc finger protein 518A", "gene_name": "ZNF518A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPSEQKQLFCDEKQTTLKKDYDVKNEIVDRSAPKPKISGSIHYALKNVKIDLPKINIPNEVLLKHEVDKYRKLFQSKQQTARKSISIKTVSCVEECTLLHKSERAEEEGVKMSAKILNFSCLKCRDNTRYSPNDLQKHFQMWHHGELPSYPCEMCNFSANDFQVFKQHRRTHRSTLVKCDICNNESVYTLLNLTKHFTSTHCVNGNFQCEKCKFSTQDVGTFVQHIHRHNEIHYKCGKCHHVCFTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLVRHVITLHKEHLYAKEKLEKDKYEKRMAKTSAGLKLILKRYKIGASRKTFWKRKKINSGSDRSIEKNTQVLKKMNKTQTKSEDQSHVVQEHLSEEKDERLHCENNDKAPESESEKPTPLSTGQGNRAEEGPNASSGFMKTAVLGPTLKNVMMKNNKLAVSPNYNATFMGFKMMDGKQHIVLKLVPIKQNVCSPGSQSGAAKDGTANLQPQTLDTNGFLTGVTTELNDTVYMKAATPFSCSSSILSGKASSEKEMTLISQRNNMLQTMDYEKSVSSLSATSELVTASVNLTTKFETRDNVDFWGNHLTQSHPEVLGTTIKSPDKVNCVAKPNAYNSGDMHNYCINYGNCELPVESSNQGSLPFHNYSKVNNSNKRRRFSGTAVYENPQRESSSSKTVVQQPISESFLSLVRQESSKPDSLLASISLLNDKDGTLKAKSEIEEQYVLEKGQNIDGQNLYSNENQNLECATEKSKWEDFSNVDSPMMPRITSVFSLQSQQASEFLPPEVNQLLQDVLKIKPDVKQDSSNTPNKGLPLHCDQSFQKHEREGKIVESSKDFKVQGIFPVPPGSVGINVPTNDLNLKFGKEKQVSSIPQDVRDSEKMPRISGFGTLLKTQSDAIITQQLVKDKLRATTQNLGSFYMQSPLLNSEQKKTIIVQTSKGFLIPLNITNKPGLPVIPGNALPLVNSQGIPASLFVNKKPGMVLTLNNGKLEGVSAVKTEGAPARGTVTKEPCKTPILKVEPNNNCLTPGLCSSIGSCLSMKSSSENTLPLKGPYILKPTSSVKAVLIPNMLSEQQSTKLNISDSVKQQNEIFPKPPLYTFLPDGKQAVFLKCVMPNKTELLKPKLVQNSTYQNIQPKKPEGTPQRILLKIFNPVLNVTAANNLSVSNSASSLQKDNVPSNQIIGGEQKEPESRDALPFLLDDLMPANEIVITSTATCPESSEEPICVSDCSESRVLRCKTNCRIERNFNRKKTSKKIFSKTKTHGSKDSETAFVSRNRNCKRKCRDSYQEPPRRKATLHRKCKEKAKPEDVRETFGFSRPRLSKDSIRTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADAPEVVSVMKTIAKFNGHVLKVSLSKRTINALLKPVCYNPPKTTYDDFSKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTTSENILKAKFNCWFCGRVFDNQDTWAGHGQRHLMEATRDWNMLE", "length": 1483 }, "evidence": [ { "id": "F1SC29", "url": "https://omabrowser.org/oma/group/F1SC29/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "pmid": "" }, { "name": "chromatin organization", "id": "GO:0006325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006325", "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SC29", "url": "https://www.uniprot.org/uniprotkb/F1SC29" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1080, "end_pos": 1082, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1116, "end_pos": 1118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1128, "end_pos": 1130, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1157, "end_pos": 1159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1163, "end_pos": 1165, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1246, "end_pos": 1248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1262, "end_pos": 1264, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1402, "end_pos": 1404, "annotation": "n_glycosylation_sequon" }, { "start_pos": 337, "end_pos": 339, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" }, { "start_pos": 411, "end_pos": 413, "annotation": "n_glycosylation_sequon" }, { "start_pos": 439, "end_pos": 441, "annotation": "n_glycosylation_sequon" }, { "start_pos": 504, "end_pos": 506, "annotation": "n_glycosylation_sequon" }, { "start_pos": 566, "end_pos": 568, "annotation": "n_glycosylation_sequon" }, { "start_pos": 642, "end_pos": 644, "annotation": "n_glycosylation_sequon" }, { "start_pos": 647, "end_pos": 649, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SC29", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC29" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 236, "end_pos": 263, "start_aa": "Tyr", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1080, "end_pos": 1082 }, { "start_pos": 1116, "end_pos": 1118 }, { "start_pos": 1128, "end_pos": 1130 }, { "start_pos": 1157, "end_pos": 1159 }, { "start_pos": 1163, "end_pos": 1165 }, { "start_pos": 1246, "end_pos": 1248 }, { "start_pos": 1262, "end_pos": 1264 }, { "start_pos": 1402, "end_pos": 1404 }, { "start_pos": 337, "end_pos": 339 }, { "start_pos": 354, "end_pos": 356 }, { "start_pos": 411, "end_pos": 413 }, { "start_pos": 439, "end_pos": 441 }, { "start_pos": 504, "end_pos": 506 }, { "start_pos": 566, "end_pos": 568 }, { "start_pos": 642, "end_pos": 644 }, { "start_pos": 647, "end_pos": 649 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDE7-1", "uniprot_ac": "F1SDE7", "uniprot_id": "F1SDE7_PIG", "mass": { "chemical_mass": 59584.0, "monoisotopic_mass": 59584.0 }, "refseq": { "ac": "XP_020923571", "name": "zinc finger protein 286A isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923571" }, "gene_names": [ { "name": "ZNF286A", "type": "recommended", "evidence": [ { "id": "F1SDE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDE7" } ] }, { "name": "ZNF286A", "type": "synonym", "evidence": [ { "id": "XP_020923571", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923571" } ] } ], "protein_names": [ { "name": "Zinc finger protein 286A", "type": "synonym", "evidence": [ { "id": "F1SDE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDE7/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 286A isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020923571", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923571" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "A0A287A548", "url": "https://www.uniprot.org/uniprotkb/A0A287A548#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" }, { "database": "UniProtKB", "id": "F1SDE7", "url": "https://www.uniprot.org/uniprotkb/F1SDE7#function" }, { "database": "UniProtKB", "id": "A0A5G2QDW6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QDW6#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDE7", "url": "https://www.uniprot.org/uniprotkb/F1SDE7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF286A", "url": "https://www.uniprot.org/uniprotkb/F1SDE7", "locus": { "chromosome": "12", "start_pos": 58982312, "end_pos": 58964479, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000018029", "url": "https://www.ensembl.org/id/ENSSSCG00000018029" } ] } } ], "crossref": [ { "id": "F1SDE7", "url": "https://alphafold.ebi.ac.uk/entry/F1SDE7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000018029", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000018029", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "106504195", "url": "https://www.ncbi.nlm.nih.gov/gene/106504195", "database": "GeneID", 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"https://www.ensembl.org/id/ENSSSCP00000039084.2" } ] } }, { "isoform_ac": "A0A5G2QDW6-1", "url": "https://www.uniprot.org/uniprotkb/F1SDE7/entry#A0A5G2QDW6-1", "sequence": { "sequence": "MVVCFVSQASMTFKDVAMDFTPEEWGELDPAQRAVMLDNYRNLASLWLPVSKPDNYSLKNGKEPSMLERKVPKSSCSDLETRPESKDSTSVQDFSKEESGQVGVKDRLTRHAVYDSNLGTTLECENWLENQQENQERHLREMFTHMNSLPAERTHEHGVYWESLSQKSILLTQDRGPKGSYAFHTLEKRLKQKSTFMKKQRTYKEKKPHKCNDCGELFTYHSVLIRHQRVHTGEKPYSCSECGKSFSHRANLTKHQRTHTRILFECSECKKAFTESASLAIHQRIHIGERPYECSECGKGFNRSTHLVQHQLIHTGVKPYECNECDKAFIHSSALIKHQRTHTGEKPYKCQECGKAFSHCSSLTKHQRVHTGEKPYECSECGKTFSQSTHLVQHQRIHTGEKPYECNECGKTFSRSSNFAKHQRIHIGKKPYKCNECGKAFIHSSALIQHQRTHTGEKPYRCNECGKSFKCSSSLIRHQKIHTEEQP", "length": 487, "header": "tr|A0A5G2QDW6-1|F1SDE7_PIG Computationally mapped isoform of Zinc finger protein 286A OS=Sus scrofa OX=9823 GN=ZNF286A PE=3 SV=1 CANONICAL=F1SDE7-1" }, "locus": { "chromosome": "12", "start_pos": 58980346, "end_pos": 58970804, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075720.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075720.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060250.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060250.1" } ] } }, { "isoform_ac": "F1SDE7-1", "url": "https://www.uniprot.org/uniprotkb/F1SDE7/entry#F1SDE7-1", "sequence": { "sequence": "METEMPGKRALSSQDSPFSQEKSTEEGEVAALRLTARSQASMTFKDVAMDFTPEEWGELDPAQRAVMLDNYRNLASLWLPVSKPDNYSLKNGKEPSMLERKVPKSSCSDLETRPESKDSTSVQDFSKEESGQVGVKDRLTRHAVYDSNLGTTLECENWLENQQENQERHLREMFTHMNSLPAERTHEHGVYWESLSQKSILLTQDRGPKGSYAFHTLEKRLKQKSTFMKKQRTYKEKKPHKCNDCGELFTYHSVLIRHQRVHTGEKPYSCSECGKSFSHRANLTKHQRTHTRILFECSECKKAFTESASLAIHQRIHIGERPYECSECGKGFNRSTHLVQHQLIHTGVKPYECNECDKAFIHSSALIKHQRTHTGEKPYKCQECGKAFSHCSSLTKHQRVHTGEKPYECSECGKTFSQSTHLVQHQRIHTGEKPYECNECGKTFSRSSNFAKHQRIHIGKKPYKCNECGKAFIHSSALIQHQRTHTGEKPYRCNECGKSFKCSSSLIRHQKIHTEEQP", "length": 518, "header": "tr|F1SDE7-1|F1SDE7_PIG Isoform 1 of Zinc finger protein 286A OS=Sus scrofa OX=9823 GN=ZNF286A PE=3 SV=3 CANONICAL=F1SDE7-1" }, "locus": { "chromosome": "12", "start_pos": 58980346, "end_pos": 58965002, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019624.3", "url": "https://www.ensembl.org/id/ENSSSCT00000019624.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019104.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019104.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., 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"database": "UniProtKB", "id": "F1SDE7", "url": "https://www.uniprot.org/uniprotkb/F1SDE7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SDE7", "url": "https://www.uniprot.org/uniprotkb/F1SDE7" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F1SDE7", "url": "https://www.uniprot.org/uniprotkb/F1SDE7" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SDE7", "url": "https://www.uniprot.org/uniprotkb/F1SDE7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { 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"https://www.ebi.ac.uk/interpro/entry/IPR042178", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154352", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154352", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IQNGFHV", "url": "https://omabrowser.org/oma/group/IQNGFHV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SH33", "url": "https://www.orthodb.org/?gene=F1SH33", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11461", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11461", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11461:SF50", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11461:SF50", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00079", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00079", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001926075", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926075", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QE31", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE31", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QE31-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE31-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAX7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAX7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAX7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAX7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SH33", "url": "https://www.uniprot.org/uniprotkb/F1SH33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SH33-1", "url": "https://www.uniprot.org/uniprotkb/F1SH33-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAFLGFFSLLVLQSLALGTTFTDETITEFSVNMYNHLRATGEDENILFSPLSVTLAMGMLELGAQGSTLKEIRHSMGYESLKSGEEFSFLKDLSHMVTAEESQYVMKIANSLFVQNGFHVNDEFLQMLKKYFNAEVNHVDFSQNVAVANYINKWVENNTNSLLKDLLSPTDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLVKAQLLEEWANSVKKQKVEVYLPRFTVEQEVDLKNVLKALGITEVFIKNANLTALSDNKEIFLSKAIHKSFIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFLIRNRRSGTILFMGRVMHPETMNTSGHDFEEL", "length": 410, "header": "tr|F1SH33-1|F1SH33_PIG Isoform 1 of Serpin family I member 1 OS=Sus scrofa OX=9823 GN=SERPINI1 PE=3 SV=1 CANONICAL=F1SH33-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QE31-1", "url": "https://www.uniprot.org/uniprotkb/F1SH33/entry#A0A5G2QE31-1", "sequence": { "sequence": "MAFLGFFSLLVLQSLALGTTFTDETITEFSVNMYNHLRATGEDENILFSPLSVTLAMGMLELGAQGSTLKEIRHSMGYESLKSGEEFSFLKDLSHMVTAEESQYVMKIANSLFVQNGFHVNDEFLQMLKKYFNAEVNHVDFSQNVAVANYINKWVENNTNSLLKDLLSPTDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLVKAQLLEEWANSVKKQKVEVYLPRFTVEQEVDLKNVLKALGITEVFIKNANLTALSDNKEIFLSKAIHKSFIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFLIRNRRSVSKGATDKGLISKIYKQLIQLNSKKTNNPTEKWTKDLNRHFSKEDIQMANKHMKKYSTSLIIREMQIKTTLVRMAIIKSTNNKCWSWCGEKETRPHCWWECKLVQSLCKTVWRYLRN", "length": 502, "header": "tr|A0A5G2QE31-1|F1SH33_PIG Computationally mapped isoform of Serpin family I member 1 OS=Sus scrofa OX=9823 GN=SERPINI1 PE=3 SV=1 CANONICAL=F1SH33-1" }, "locus": { "chromosome": "13", "start_pos": 106656966, "end_pos": 106606277, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079474.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079474.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061912.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061912.1" } ] } }, { "isoform_ac": "A0A8W4FAX7-1", "url": "https://www.uniprot.org/uniprotkb/F1SH33/entry#A0A8W4FAX7-1", "sequence": { "sequence": "MAFLGFFSLLVLQSLALGTTFTDETITEFSVNMYNHLRATGEDENILFSPLSVTLAMGMLELGAQGSTLKEIRHSMGYESLKSGEEFSFLKDLSHMVTAEESQYVMKIANSLFVQNGFHVNDEFLQMLKKYFNAEVNHVDFSQNVAVANYINKWVENNTNSLLKDLLSPTDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLVKAQLLEEWANSVKKQKVEVYLPRFTVEQEVDLKNVLKALGITEVFIKNANLTALSDNKEIFLSKAIHKSFIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFLIRNRRSGKSVMRTEL", "length": 394, "header": "tr|A0A8W4FAX7-1|A0A8W4FAX7_PIG Computationally mapped isoform of Serpin family I member 1 OS=Sus scrofa OX=9823 GN=SERPINI1 PE=3 SV=1 CANONICAL=F1SH33-1" }, "locus": { "chromosome": "13", "start_pos": 106636402, "end_pos": 106606277, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092829.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092829.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076422.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076422.1" } ] } }, { "isoform_ac": "F1SH33-1", "url": "https://www.uniprot.org/uniprotkb/F1SH33/entry#F1SH33-1", "sequence": { "sequence": "MAFLGFFSLLVLQSLALGTTFTDETITEFSVNMYNHLRATGEDENILFSPLSVTLAMGMLELGAQGSTLKEIRHSMGYESLKSGEEFSFLKDLSHMVTAEESQYVMKIANSLFVQNGFHVNDEFLQMLKKYFNAEVNHVDFSQNVAVANYINKWVENNTNSLLKDLLSPTDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLVKAQLLEEWANSVKKQKVEVYLPRFTVEQEVDLKNVLKALGITEVFIKNANLTALSDNKEIFLSKAIHKSFIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFLIRNRRSGTILFMGRVMHPETMNTSGHDFEEL", "length": 410, "header": "tr|F1SH33-1|F1SH33_PIG Isoform 1 of Serpin family I member 1 OS=Sus scrofa OX=9823 GN=SERPINI1 PE=3 SV=1 CANONICAL=F1SH33-1" }, "locus": { "chromosome": "13", "start_pos": 106636674, "end_pos": 106606277, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012851.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012851.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012511.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012511.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE31", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE31" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154352", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154352", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BCA5-1", "protein_name": "Serpin family I member 1", "gene_name": "SERPINI1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAFLGLFSLLVLQSLALGTTFTDETIAELSVNMYNHLRATGEDENILFSPLSVTLAMGMLELGAQGSTLKEIRHSMGYDSLKNGEEFSFLKDLSHMVTAEESQYVMKIANSLFVQNGFHISEEFLQMIKKYFNAEVNHVDFSQNVAVANYINKWVENNTNSLLKDLVSPRDFDAVTHLALINAVYFKGSWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDAISMMLVLSRQEVPLATLEPLVKTQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGVTEVFIKNANLTALSDNKEIFLSKAIHKCFIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFLIRNRRTGTILFMGRVMHPETMNASGHDFEEL", "length": 410 }, "evidence": [ { "id": "F1SH33", "url": "https://omabrowser.org/oma/group/F1SH33/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O35684-1", "protein_name": "Neuroserpin", "gene_name": "Serpini1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTYLELLALLALQSVVTGATFPDETITEWSVNMYNHLRGTGEDENILFSPLSIALAMGMMELGAQGSTRKEIRHSMGYEGLKGGEEFSFLRDFSNMASAEENQYVMKLANSLFVQNGFHVNEEFLQMLKMYFNAEVNHVDFSQNVAVANSINKWVENYTNSLLKDLVSPEDFDGVTNLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLALSRQEVPLATLEPLLKAQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDANLTAMSDKKELFLSKAVHKSCIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFLYLIRNRKSGIILFMGRVMNPETMNTSGHDFEEL", "length": 410 }, "evidence": [ { "id": "F1SH33", "url": "https://omabrowser.org/oma/group/F1SH33/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q90935-1", "protein_name": "Neuroserpin", "gene_name": "SERPINI1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MYFLGLLSLLVLPSKAFKTNFPDETIAELSVNVYNQLRAAREDENILFCPLSIAIAMGMIELGAHGTTLKEIRHSLGFDSLKNGEEFTFLKDLSDMATTEESHYVLNMANSLYVQNGFHVSEKFLQLVKKYFKAEVENIDFSQSAAVATHINKWVENHTNNMIKDFVSSRDFSALTHLVLINAIYFKGNWKSQFRPENTRTFSFTKDDETEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMIVLSRQEVPLVTLEPLVKASLINEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKGLGITEVFSRSADLTAMSDNKELYLAKAFHKAFLEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFLVRNRRTGTVLFMGRVMHPEAMNTSGHDFEEL", "length": 410 }, "evidence": [ { "id": "F1SH33", "url": "https://omabrowser.org/oma/group/F1SH33/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q99574-1", "protein_name": "Neuroserpin", "gene_name": "SERPINI1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAFLGLFSLLVLQSMATGATFPEEAIADLSVNMYNRLRATGEDENILFSPLSIALAMGMMELGAQGSTQKEIRHSMGYDSLKNGEEFSFLKEFSNMVTAKESQYVMKIANSLFVQNGFHVNEEFLQMMKKYFNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLVKAQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDANLTGLSDNKEIFLSKAIHKSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTGTILFMGRVMHPETMNTSGHDFEEL", "length": 410 }, "evidence": [ { "id": "F1SH33", "url": "https://omabrowser.org/oma/group/F1SH33/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JLD2-1", "protein_name": "Neuroserpin", "gene_name": "Serpini1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAYLGLLSLVALQSLVTGAAFPDETIAEWSVNVYNHLRATGEDENILFSPLSIALAMGVMELGAQGSTLKEIRHSMGYESLKSGEEFSFLRDFSSMVSAEEGQYVMKIANSLFVQNGFHINEEFLQMMKMYFNAEVNHVDFSENVAVANYINKWVENYTNSLLKDLVSPGDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDEISMMLVLSRQEVPLATLEPLLKPQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDANLTAMSDKKELFLSKAVHKSFIEVNEEGSEAAVASGMIAISRMAVLFPQVIVDHPFLFLIKNRKTGTILFMGRVMHPETMNTSGHDFEEL", "length": 410 }, "evidence": [ { "id": "F1SH33", "url": "https://omabrowser.org/oma/group/F1SH33/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9S7T8-1", "protein_name": "Serpin-ZX", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDVRESISLQNQVSMNLAKHVITTVSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNSFSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSKKKQYVSAYDGFKVLGLPYLQGQDKRQFSMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVREFKIPKFKFSFGFDASNVLKGLGLTSPFSGEEGLTEMVESPEMGKNLCVSNIFHKACIEVNEEGTEAAAASAGVIKLRGLLMEEDEIDFVADHPFLLVVTENITGVVLFIGQVVDPLH", "length": 391 }, "evidence": [ { "id": "F1SH33", "url": "https://omabrowser.org/oma/group/F1SH33/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase inhibitor activity", "id": "GO:0004867", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004867", "evidence": [ { "database": "UniProtKB", "id": "F1SH33", "url": "https://www.uniprot.org/uniprotkb/F1SH33" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SH33", "url": "https://www.uniprot.org/uniprotkb/F1SH33" } ], "pmid": "" }, { "name": "secretory granule lumen", "id": "GO:0034774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034774", "evidence": [ { "database": "UniProtKB", "id": "F1SH33", "url": "https://www.uniprot.org/uniprotkb/F1SH33" } ], "pmid": "" }, { "name": "neuronal cell body", "id": "GO:0043025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043025", "evidence": [ { "database": "UniProtKB", "id": "F1SH33", "url": "https://www.uniprot.org/uniprotkb/F1SH33" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 321, "end_pos": 323, "annotation": "n_glycosylation_sequon" }, { "start_pos": 401, "end_pos": 403, "annotation": "n_glycosylation_sequon" } ], 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{ "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 157, "end_pos": 159 }, { "start_pos": 321, "end_pos": 323 }, { "start_pos": 401, "end_pos": 403 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF00038", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16208", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16208", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6809371", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AMT5", "url": "https://www.uniprot.org/uniprotkb/A0A287AMT5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMT5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMT5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AU45", "url": "https://www.uniprot.org/uniprotkb/A0A287AU45", "database": "UniProtKB", "categories": [ "Protein" ] }, { 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"MSCRSYRISQGCGVTRTFSSCSAVAPKTGSRCCISAAPYRGVSCYRGLTGFGSRSVSALGSCGPRIAVGGFRAGSGGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKVRFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIVKMDNSRDLNMCVVAEIKAQYDDVASRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCVSSSRGGVSSGGLTYSTTPGRQITSGPVATGGSITVMAPDSCAPCQPRASSFSCGSSRSVRFA", "length": 506, "header": "tr|F1SGI3-1|F1SGI3_PIG Isoform 1 of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=3 CANONICAL=F1SGI3-1" }, "isoforms": [ { "isoform_ac": "A0A287AMT5-1", "url": "https://www.uniprot.org/uniprotkb/F1SGI3/entry#A0A287AMT5-1", "sequence": { "sequence": "MTLWTGTTSNHQGCGVTRTFSSCSAVAPKTGSRCCISAAPYRGVSCYRGLTGFGSRTVGGFRAGSGGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKVRFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIVKMDNSRDLNMNVLSRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCKYLLETLLEK", "length": 432, "header": "tr|A0A287AMT5-1|A0A287AMT5_PIG Computationally mapped isoform of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=2 CANONICAL=F1SGI3-1" }, "locus": { "chromosome": "5", "start_pos": 17687245, "end_pos": 17680608, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050973.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050973.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045319.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045319.2" } ] } }, { "isoform_ac": "A0A287AU45-1", "url": "https://www.uniprot.org/uniprotkb/F1SGI3/entry#A0A287AU45-1", "sequence": { "sequence": "RCCGSGIGWQTFSSCSAVAPKTGSRCCISAAPYRGVSCYRGLTGFGSRTVGGFRAGSGGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKVRFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIIKAQYDDVASRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCKYLLETLLEK", "length": 419, "header": "tr|A0A287AU45-1|A0A287AU45_PIG Computationally mapped isoform of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=1 CANONICAL=F1SGI3-1" }, "locus": { "chromosome": "5", "start_pos": 17690711, "end_pos": 17680608, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042091.1", "url": "https://www.ensembl.org/id/ENSSSCT00000042091.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047437.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047437.1" } ] } }, { "isoform_ac": "A0A287BEQ1-1", "url": "https://www.uniprot.org/uniprotkb/F1SGI3/entry#A0A287BEQ1-1", "sequence": { "sequence": "HCCGHREGCGVTRTFSSCSAVAPKTGSRCCISAAPYRGVSCYRGLTGFGSRTVGGFRAGSGGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKVRFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIIKAQYDDVASRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCKYLLETLLEK", "length": 422, "header": "tr|A0A287BEQ1-1|A0A287BEQ1_PIG Computationally mapped isoform of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=2 CANONICAL=F1SGI3-1" }, "locus": { "chromosome": "5", "start_pos": 17687384, "end_pos": 17680608, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052784.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052784.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054595.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054595.2" } ] } }, { "isoform_ac": "A0A5G2QE51-1", "url": "https://www.uniprot.org/uniprotkb/F1SGI3/entry#A0A5G2QE51-1", "sequence": { "sequence": "MLAKPSLSSRPCLPHAQDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIVKMDNSRDLNMCVVAEIKAQYDDVASRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCVSSSRGGVSSGGLTYSTTPGRQITSGPVATGGSITVMAPDSCAPCQPRASSFSCGSSRSVRFA", "length": 293, "header": "tr|A0A5G2QE51-1|F1SGI3_PIG Computationally mapped isoform of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=1 CANONICAL=F1SGI3-1" }, "locus": { "chromosome": "5", "start_pos": 17683857, "end_pos": 17680000, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077722.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077722.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062929.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062929.1" } ] } }, { "isoform_ac": "A0A5G2R3J8-1", "url": "https://www.uniprot.org/uniprotkb/F1SGI3/entry#A0A5G2R3J8-1", "sequence": { "sequence": "MSCRSYRISQGCGVTRTFSSCSAVAPKTGSRCCISAAPYRGVSCYRGLTGFGSRTVGGFRAGSGGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKVRFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIIKAQYDDVASRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCVSSSRGGVSSGGLTYSTTPGRQITSGPVATGGSITVMAPDSCAPCQPRASSFSCGSSRSVRFA", "length": 478, "header": "tr|A0A5G2R3J8-1|F1SGI3_PIG Computationally mapped isoform of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=1 CANONICAL=F1SGI3-1" }, "locus": { "chromosome": "5", "start_pos": 17686602, "end_pos": 17680000, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081792.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081792.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068772.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068772.1" } ] } }, { "isoform_ac": "A0A8W4FD07-1", "url": "https://www.uniprot.org/uniprotkb/F1SGI3/entry#A0A8W4FD07-1", "sequence": { "sequence": "MLEPSLGLPPKHTPPPPQDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIIKAQYDDVASRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCVSSSRGGVSSGGLTYSTTPGRQITSGPVATGGSITVMAPDSCAPCQPRASSFSCGSSRSVRFA", "length": 278, "header": "tr|A0A8W4FD07-1|A0A8W4FD07_PIG Computationally mapped isoform of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=1 CANONICAL=F1SGI3-1" }, "locus": { "chromosome": "5", "start_pos": 17683857, "end_pos": 17680000, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093242.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093242.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077279.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077279.1" } ] } }, { "isoform_ac": "F1SGI3-1", "url": "https://www.uniprot.org/uniprotkb/F1SGI3/entry#F1SGI3-1", "sequence": { "sequence": "MSCRSYRISQGCGVTRTFSSCSAVAPKTGSRCCISAAPYRGVSCYRGLTGFGSRSVSALGSCGPRIAVGGFRAGSGGRSFGYRSGGVCGPSPPCITTVSVNESLLTPLNLEIDPNAQCVKHEEKEQIKNLNSRFAAFIDKVRFLEQQNKLLETKWQFYQNQRCCESNLEPLFNGYIETLRREAELVEADSGRLASELNHVQEVLEGYKKKYEEEVALRATAENEFVVLKKDVDCAYLRKSDLEANVEALVEESSFLKRLYDEELQILHAHISDTSVIVKMDNSRDLNMCVVAEIKAQYDDVASRSRAEAESWYRSKCEEMKATVVRHGETLRRTKEEINELNRMIQRLTAEIENAKCQRAKLEAAVAEAEQQGEAALNDARCKLAELEAALQKAKQDMACLVKEYQEVLNSKLGLDIEIATYRRLLEGEEHRLCEGVGSVNVCVSSSRGGVSSGGLTYSTTPGRQITSGPVATGGSITVMAPDSCAPCQPRASSFSCGSSRSVRFA", "length": 506, "header": "tr|F1SGI3-1|F1SGI3_PIG Isoform 1 of Keratin 85 OS=Sus scrofa OX=9823 GN=KRT85 PE=1 SV=3 CANONICAL=F1SGI3-1" }, "locus": { "chromosome": "5", "start_pos": 17686602, "end_pos": 17680000, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000259.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000259.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000255.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000255.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin 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"pmid": "" }, { "name": "intermediate filament", "id": "GO:0005882", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005882", "evidence": [ { "database": "UniProtKB", "id": "F1SGI3", "url": "https://www.uniprot.org/uniprotkb/F1SGI3" } ], "pmid": "" }, { "name": "keratin filament", "id": "GO:0045095", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045095", "evidence": [ { "database": "UniProtKB", "id": "F1SGI3", "url": "https://www.uniprot.org/uniprotkb/F1SGI3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "keratinization", "id": "GO:0031424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031424", "evidence": [ { "database": "UniProtKB", "id": "F1SGI3", "url": "https://www.uniprot.org/uniprotkb/F1SGI3" } ], "pmid": "" }, { "name": "intermediate filament organization", "id": "GO:0045109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045109", "evidence": [ { "database": "UniProtKB", "id": "F1SGI3", "url": 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"https://www.orthodb.org/?gene=F1SIE1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24366", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24366", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24366:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24366:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-114608", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001928209", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928209", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QE94", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QE94-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE94-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIE1", "url": "https://www.uniprot.org/uniprotkb/F1SIE1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIE1-1", "url": "https://www.uniprot.org/uniprotkb/F1SIE1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQELCLLCWVVLVGLVQACPKPCDCGEKYGFQIADCAYRDLEAVPPGFPANVTTLSLSANRLPSLPEGAFREVLLLQSLWLAHNEIRTVAAGALAPLGHLKSLDLSHNLISDFAWSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFEPLTALSHLQINDNPFDCTCSIMWFKTWALTTAVSIPEQDNITCTSPHVLKGTRLNRLLPLPCSAPSVQLTYQPSQDGAELQPGFVLALHCDVDGQPAPQLHWHIQTPRGTVEIASPNVGADGRALPGALAASARPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVNVALATPGEGGEDALGRRFHGKAAEGKGCYTVDNEVQPSGPEDNVVIIYLSRTGGPEAAATGEGVSAQQPPGLLLLGQSILLLVLTFF", "length": 428, "header": "tr|F1SIE1-1|F1SIE1_PIG Isoform 1 of Immunoglobulin superfamily containing leucine-rich repeat protein OS=Sus scrofa OX=9823 GN=ISLR PE=1 SV=3 CANONICAL=F1SIE1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QE94-1", "url": "https://www.uniprot.org/uniprotkb/F1SIE1/entry#A0A5G2QE94-1", "sequence": { "sequence": "MTSGVRMQELCLLCWVVLVGLVQACPKPCDCGEKYGFQIADCAYRDLEAVPPGFPANVTTLSLSANRLPSLPEGAFREVLLLQSLWLAHNEIRTVAAGALAPLGHLKSLDLSHNLISDFAWSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFEPLTALSHLQINDNPFDCTCSIMWFKTWALTTAVSIPEQDNITCTSPHVLKGTRLNRLLPLPCSAPSVQLTYQPSQDGAELQPGFVLALHCDVDGQPAPQLHWHIQTPRGTVEIASPNVGADGRALPGALAASARPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVNVALATPGEGGEDALGRRFHGKAAEGKGCYTVDNEVQPSGPEDNVVIIYLSRTGGPEAAATGEGVSAQQPPGLLLLGQSILLLVLTFF", "length": 434, "header": "tr|A0A5G2QE94-1|F1SIE1_PIG Computationally mapped isoform of Immunoglobulin superfamily containing leucine-rich repeat protein OS=Sus scrofa OX=9823 GN=ISLR PE=1 SV=1 CANONICAL=F1SIE1-1" }, "locus": { "chromosome": "7", "start_pos": 59351894, "end_pos": 59350395, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076582.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076582.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062974.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062974.1" } ] } }, { "isoform_ac": "F1SIE1-1", "url": "https://www.uniprot.org/uniprotkb/F1SIE1/entry#F1SIE1-1", "sequence": { "sequence": "MQELCLLCWVVLVGLVQACPKPCDCGEKYGFQIADCAYRDLEAVPPGFPANVTTLSLSANRLPSLPEGAFREVLLLQSLWLAHNEIRTVAAGALAPLGHLKSLDLSHNLISDFAWSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFEPLTALSHLQINDNPFDCTCSIMWFKTWALTTAVSIPEQDNITCTSPHVLKGTRLNRLLPLPCSAPSVQLTYQPSQDGAELQPGFVLALHCDVDGQPAPQLHWHIQTPRGTVEIASPNVGADGRALPGALAASARPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVNVALATPGEGGEDALGRRFHGKAAEGKGCYTVDNEVQPSGPEDNVVIIYLSRTGGPEAAATGEGVSAQQPPGLLLLGQSILLLVLTFF", "length": 428, "header": "tr|F1SIE1-1|F1SIE1_PIG Isoform 1 of Immunoglobulin superfamily containing leucine-rich repeat protein OS=Sus scrofa OX=9823 GN=ISLR PE=1 SV=3 CANONICAL=F1SIE1-1" }, "locus": { "chromosome": "7", "start_pos": 59351678, "end_pos": 59350395, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002139.6", "url": "https://www.ensembl.org/id/ENSSSCT00000002139.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002089.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002089.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 346, "start_aa": "Thr", "end_pos": 346, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr346", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QE94", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QE94" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152082", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152082", "resource": "KEGG Pathway" }, { "id": "R-SSC-114608", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "resource": "Reactome", "description": "Platelet degranulation" } ], "orthologs": [ { "uniprot_canonical_ac": "A4IFA6-1", "protein_name": "Immunoglobulin superfamily containing leucine-rich repeat protein", "gene_name": "ISLR", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQELRLLCLVVLVGLAQACPEPCECGEKYGFHIADCAYRDLQAVPSGFPANVTTLSLSANQLPSLPGGAFREVPRLQSLWLAHNEIRSVAAGALASLSQLKSLDLSHNLISDFAWSDLHSLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFAPLTALSHLQINDNPFDCTCGIVWFKTWALTTAVSIPEQDNITCTSPHVLKGTRLNRLLPLPCSAPSVQLTYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHIQTPGGTVEITSPNVGADGRALPGVLAASSRPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVNVALATPGEGGEDALGRRFQGKAAEGKVCYTVDNEVQPSGPEDNVVIIYLSRARGPEAAATAEGVPGKQPPGLLLLGQSLLFLFLASF", "length": 428 }, "evidence": [ { "id": "F1SIE1", "url": "https://omabrowser.org/oma/group/F1SIE1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "B1H232-1", "protein_name": "Immunoglobulin superfamily containing leucine-rich repeat protein", "gene_name": "Islr", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQALCLLCWVVLLNLVRACPEACDCGEKYGFQIADCAYRDLDGVPPGFPANVTTLSLSANRLPVLLEGSFREVPLLQSLWLAHNEIRSVAVGALAPLGHLKSLDLSHNLISEFAWSDLHNLSALQLLKMDSNELAFIPRDAFRSLHALRSLQLNHNRLHALAEGTFAPLTSLSHLQINHNPFDCTCGIVWFKTWALATAVSIPEQDNIACTSPHVLKGTPLSRLPPLPCSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPVPQLHWHIHTPGGTVEIASPNVGTDGRPLPGALAASGQPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVNVALATPGEGGEDAVGRKFHGKTVEGKGCYTVDNEVQPSGPEDNVVIIYLSRAGPPEAAVTAEGRPAQQLSGVLLLGQSLLVLFLSCF", "length": 428 }, "evidence": [ { "id": "F1SIE1", "url": "https://omabrowser.org/oma/group/F1SIE1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O14498-1", "protein_name": "Immunoglobulin superfamily containing leucine-rich repeat protein", "gene_name": "ISLR", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQELHLLWWALLLGLAQACPEPCDCGEKYGFQIADCAYRDLESVPPGFPANVTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLTALSHLQINENPFDCTCGIVWLKTWALTTAVSIPEQDNIACTSPHVLKGTPLSRLPPLPCSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHIQIPSGIVEITSPNVGTDGRALPGTPVASSQPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVDVALATPGEGGEDTLGRRFHGKAVEGKGCYTVDNEVQPSGPEDNVVIIYLSRAGNPEAAVAEGVPGQLPPGLLLLGQSLLLFFFLTSF", "length": 428 }, "evidence": [ { "id": "F1SIE1", "url": "https://omabrowser.org/oma/group/F1SIE1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6GU68-1", "protein_name": "Immunoglobulin superfamily containing leucine-rich repeat protein", "gene_name": "Islr", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRALCLLCWAVLLNLVRACPEPCDCGEKYGFQIADCAYRDLEGVPPGFPANVTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRSVAIGALAPLSHLKSLDLSHNLLSEFAWSDLHNLSALQLLKMDSNELAFIPRDAFSSLSALRSLQLNHNRLHALAEGTFAPLTALSHLQINDNPFDCTCGIVWFKTWALASAVSIPEQDNIACTTPHVLKGIPLGRLPPLPCSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPVPQLHWHIHTPGGTVEIASPNVGTDGRALPGALATSGQPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVNVALATPGEGGEDAVGHKFHGKAVEGKGCYTVDNEVQPSGPEDNVVIIYLSRAGPPEAAIAADGRPAQQFSGILLLGQSLLVLSFFYF", "length": 428 }, "evidence": [ { "id": "F1SIE1", "url": "https://omabrowser.org/oma/group/F1SIE1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F1SIE1", "url": "https://www.uniprot.org/uniprotkb/F1SIE1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 120, "end_pos": 122, "annotation": "n_glycosylation_sequon" }, { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 309, "end_pos": 311, "annotation": "n_glycosylation_sequon" }, { "start_pos": 51, "end_pos": 53, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SIE1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 428, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SIE1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SIE1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SIE1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIE1" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 232, "end_pos": 343, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 346 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 120, "end_pos": 122 }, { "start_pos": 207, "end_pos": 209 }, { "start_pos": 309, "end_pos": 311 }, { "start_pos": 51, "end_pos": 53 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBB2-1", "uniprot_ac": "F1SBB2", "uniprot_id": "F1SBB2_PIG", "mass": { "chemical_mass": 65799.0, "monoisotopic_mass": 65799.0 }, "refseq": { "ac": "XP_003356432", "name": "tetratricopeptide repeat protein 39C isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356432" }, "gene_names": [ { "name": "TTC39C", "type": "recommended", "evidence": [ { "id": "F1SBB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBB2" } ] }, { "name": "TTC39C", "type": "synonym", "evidence": [ { "id": "XP_003356432", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356432" } ] } ], "protein_names": [ { "name": "Tetratricopeptide repeat domain 39C", "type": "synonym", "evidence": [ { "id": "F1SBB2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBB2/entry#names_and_taxonomy" } ] }, { "name": "tetratricopeptide repeat protein 39C isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003356432", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356432" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBB2", "url": "https://www.uniprot.org/uniprotkb/F1SBB2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TTC39C", "url": "https://www.uniprot.org/uniprotkb/F1SBB2", "locus": { "chromosome": "6", "start_pos": 108968678, "end_pos": 108860324, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003710", "url": "https://www.ensembl.org/id/ENSSSCG00000003710" } ] } } ], "crossref": [ { "id": "ENSSSCG00000003710", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003710", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511088", "url": "https://www.ncbi.nlm.nih.gov/gene/100511088", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511088", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511088", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YNIAMKQ", "url": "https://omabrowser.org/oma/group/YNIAMKQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SBB2", "url": "https://www.orthodb.org/?gene=F1SBB2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31859", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31859", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31859:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31859:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10300", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10300", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003356432", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356432", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QEJ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEJ8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R749", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R749", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R749-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R749-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBB2", "url": "https://www.uniprot.org/uniprotkb/F1SBB2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBB2-1", "url": "https://www.uniprot.org/uniprotkb/F1SBB2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGSEQQRPRRRDDGDSAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSTPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEEPLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELDFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRKNNQIEQFSVKKAERFRKQTPTRALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQFFQRAVKDELCRQNNLYIQPYACYELGCLLLDKPETVGRGRTLLLQAKEDFSGYDFENRLHVRIHAALASMRELVPQ", "length": 581, "header": "tr|F1SBB2-1|F1SBB2_PIG Isoform 1 of Tetratricopeptide repeat domain 39C OS=Sus scrofa OX=9823 GN=TTC39C PE=3 SV=3 CANONICAL=F1SBB2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QEJ8-1", "url": "https://www.uniprot.org/uniprotkb/F1SBB2/entry#A0A5G2QEJ8-1", "sequence": { "sequence": "MAGSEQQRPRRRDDGDSAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSTPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEEPLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELDFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRKNNQIEQFSVKKAERFRKQTPTRALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQTVGRGRTLLLQAKEDFSGYDFENRLHVRIHAALASMRELVPQ", "length": 546, "header": "tr|A0A5G2QEJ8-1|F1SBB2_PIG Computationally mapped isoform of Tetratricopeptide repeat domain 39C OS=Sus scrofa OX=9823 GN=TTC39C PE=3 SV=2 CANONICAL=F1SBB2-1" }, "locus": { "chromosome": "6", "start_pos": 108965744, "end_pos": 108860393, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075131.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075131.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063100.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063100.2" } ] } }, { "isoform_ac": "A0A5G2R749-1", "url": "https://www.uniprot.org/uniprotkb/F1SBB2/entry#A0A5G2R749-1", "sequence": { "sequence": "MAGSEQQRPRRRDDGDSAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRKSLTTPGRTMVLPVKTR", "length": 71, "header": "tr|A0A5G2R749-1|A0A5G2R749_PIG Computationally mapped isoform of Tetratricopeptide repeat domain 39C OS=Sus scrofa OX=9823 GN=TTC39C PE=4 SV=1 CANONICAL=F1SBB2-1" }, "locus": { "chromosome": "6", "start_pos": 108865628, "end_pos": 108860393, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070281.1", "url": "https://www.ensembl.org/id/ENSSSCT00000070281.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073077.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073077.1" } ] } }, { "isoform_ac": "F1SBB2-1", "url": "https://www.uniprot.org/uniprotkb/F1SBB2/entry#F1SBB2-1", "sequence": { "sequence": "MAGSEQQRPRRRDDGDSAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSTPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEEPLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELDFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRKNNQIEQFSVKKAERFRKQTPTRALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQFFQRAVKDELCRQNNLYIQPYACYELGCLLLDKPETVGRGRTLLLQAKEDFSGYDFENRLHVRIHAALASMRELVPQ", "length": 581, "header": "tr|F1SBB2-1|F1SBB2_PIG Isoform 1 of Tetratricopeptide repeat domain 39C OS=Sus scrofa OX=9823 GN=TTC39C PE=3 SV=3 CANONICAL=F1SBB2-1" }, "locus": { "chromosome": "6", "start_pos": 108965744, "end_pos": 108860393, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004109.4", "url": "https://www.ensembl.org/id/ENSSSCT00000004109.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004017.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004017.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QEJ8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEJ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511088", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511088", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q0VGK2-1", "protein_name": "Tetratricopeptide repeat protein 39C", "gene_name": "Ttc39c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDARKSTPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYVDINALQELHQKTLTEEPLSSDAANDNHIVAEGVTEEALSRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLTYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKGGLDEAKAILLRKESAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQLIFKEVQKLFKRKNNQIEQFSVKKAERFRKQTPTRALCVLASIEVLYLWKALPNCSLPNLQRMSQACHEVDDSSVVGLKHLLLGAIHKCLGNSQDAVQFFQRAAKDESCRQNNSYVQPYACYELGCLLLDRAETVARGRTLLLQAKEDFSGYDFENRLHVRVHAALASLRELVPQ", "length": 522 }, 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ94-1", "uniprot_ac": "F1SJ94", "uniprot_id": "F1SJ94_PIG", "mass": { "chemical_mass": 158432.0, "monoisotopic_mass": 158432.0 }, "refseq": { "ac": "XP_020954673", "name": "S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954673" }, "gene_names": [ { "name": "SCAPER", "type": "recommended", "evidence": [ { "id": "F1SJ94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ94" } ] }, { "name": "SCAPER", "type": "synonym", "evidence": [ { "id": "XP_020954673", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954673" } ] } ], "protein_names": [ { "name": "S phase cyclin A-associated protein in the endoplasmic reticulum isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020954673", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954673" } ] }, { "name": "S-phase cyclin A associated protein in the ER", "type": "synonym", "evidence": [ { "id": "F1SJ94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ94/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJ94", "url": "https://www.uniprot.org/uniprotkb/F1SJ94" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SCAPER", "url": "https://www.uniprot.org/uniprotkb/F1SJ94", "locus": { "chromosome": "7", "start_pos": 56583160, "end_pos": 57011914, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001865", "url": "https://www.ensembl.org/id/ENSSSCG00000001865" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001865", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001865", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154669", "url": "https://www.ncbi.nlm.nih.gov/gene/100154669", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003604", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003604", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032446", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032446", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154669", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154669", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A2B1", "url": "https://www.orthodb.org/?gene=A0A287A2B1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31434", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31434", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31434:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31434:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12874", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12874", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16501", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16501", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020954673", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954673", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A2B1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2B1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2B1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2B1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AL12", "url": "https://www.uniprot.org/uniprotkb/A0A287AL12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AL12-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AL12-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG97", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG97-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG97-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3E6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3E6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3E6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3E6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3Z9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3Z9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3Z9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3Z9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ94", "url": "https://www.uniprot.org/uniprotkb/F1SJ94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ94-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ94-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTHKTTKQNTAVDCKITPATTGDKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGGSPVAVAAPRLPPTGVSWADKVKAHHTGSTASSDVAPAQSCPPMAVQKPSRKNERKDAEGWETVQRGRPIRSRSTAVMPKVSLATEALRSKDDSDKENVRLLHDESIQKGEFVGDGPSNTIESRPKDSLHSCDHPLAERTQFTVSALDDVKNSGSSFFQDSSGQTSEIPPVHINTECVSITQQTDTPSLQANEDKFLAENVRIENEMDPSDISNSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSTSMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIIDIVVESAAPPEPSKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKAKLQRLAKDLLKQLQVQDSVSWANNKVSALDRTLGEIARILEKENVADQIAFQVAGGLTALEHILQVVVPVTNVNTVSRIPPKSLCNAINVYNLTCNNCSENCTDVLFSNKITFLMDLLIHQLTVYVPDENNAILGRNTNKQVFEGLTTGLLKVSAVVFGCLIAHRPDGNSQPTTPKISTQEMKNKPSQGDAFNSRVQDLISYVVNIGLIDKLCGCFLSVQGPVDENPKMAVFLQHAAGLLHGMCTLCFAVTGRSYSIFDNNRQDPTGLTAALQATDLAGVLHMLYCVLFHGTISDPSTASPKESYAQNTIQVAIQSLRFFNSFAALDLPAFQSIVGAEGLSLAFRHIASSLLGHCSHVSCESLLHEVIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNLQNKIILEQEMSCVLLATFIQDFAQTPGQTDNQPYQPKGICMGSQDYLELANRFPQQAWEEARQFFLKKEKK", "length": 1402, "header": "tr|F1SJ94-1|F1SJ94_PIG Isoform 1 of S-phase cyclin A associated protein in the ER OS=Sus scrofa OX=9823 GN=SCAPER PE=4 SV=4 CANONICAL=F1SJ94-1" }, "isoforms": [ { "isoform_ac": "A0A287A2B1-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ94/entry#A0A287A2B1-1", "sequence": { "sequence": "MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTHKTTKQNTAVDCKITPATTGDKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGGSPVAVAAPRLPPTGVSWADKVKAHHTGSTASSDVAPAQSCPPMAVQKPSRKNERKDAEGWETVQRGRPIRSRSTAVMPKVSLATEALRSKDDSDKENVRLLHDESIQKGEFVGDGPSNTIESRPKDSLHSCDHPLAERTQFTVSALDDVKNSGSSFFQDSSGQTSEIPPVHINTECVSITQQTDTPSLQANEDKFLAENVRIENEMDPSDISNVSAANLSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSTSMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIIDIVVESAAPPEPSKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKAKLQRLAKDLLKQLQVQDSVSWANNKVSALDRTLGEIARILEKENVADQIAFQVAGGLTALEHILQVVVPVTNVNTVSRIPPKSLCNAINVYNLTCNNCSENCTDVLFSNKITFLMDLLIHQLTVYVPDENNAILGRNTNKQVFEGLTTGLLKVSAVVFGCLIAHRPDGNSQPTTPKISTQEMKNKPSQGDAFNSRVQDLISYVVNIGLIDKLCGCFLSVQGPVDENPKMAVFLQHAAGLLHGMCTLCFAVTGRSYSIFDNNRQDPTGLTAALQATDLAGVLHMLYCVLFHGTISDPSTASPKESYAQNTIQVAIQSLRFFNSFAALDLPAFQSIVGAEGLSLAFRHIASSLLGHCSHVSCESLLHEVIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNLQNKIILEQEMSCVLLATFIQDFAQTPGQTDNQPYQPKGICMGSQDYLELANRFPQQAWEEARQFFLKKEKK", "length": 1408, "header": "tr|A0A287A2B1-1|A0A287A2B1_PIG Computationally mapped isoform of S-phase cyclin A associated protein in the ER OS=Sus scrofa OX=9823 GN=SCAPER PE=4 SV=1 CANONICAL=F1SJ94-1" }, "locus": { "chromosome": "7", "start_pos": 56993975, "end_pos": 56583563, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040228.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040228.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038079.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038079.1" } ] } }, { "isoform_ac": "A0A287AL12-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ94/entry#A0A287AL12-1", "sequence": { "sequence": "MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTHKTTKQNTAVDCKITPATTGDKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGGSPVAVAAPRLPPTGVSWADKVKAHHTGSTASSDVAPAQSCPPMAVQKPSRKNERKDAEGWETVQRGRPIRSRSTAVMPKVSLATEALRSKDDSDKENVRLLHDESIQKGEFVGDGPSNTIESRPKDSLHSCDHPLAERTQFTVSALDDVKNSGSSFFQDSSGQTSEIPPVHINTECVSITQQTDTPSLQANEDKFLAENVRIENEMDPSDISNTSMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIIDIVVESAAPPEPSKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKAKLQRLAKDLLKQLQVQDSVSWANNKVSALDRTLGEIARILEKENVADQIAFQVAGGLTALEHILQVVVPVTNVNTVSRIPPKSLCNAINVYNLTCNNCSENCTDVLFSNKITFLMDLLIHQLTVYVPDENNAILGRNTNKQVFEGLTTGLLKVSAVVFGCLIAHRPDGNSQPTTPKISTQEMKNKPSQGDAFNSRVQDLISYVVNIGLIDKLCGCFLSVQGPVDENPKMAVFLQHAAGLLHGMCTLCFAVTGRSYSIFDNNRQDPTGLTAALQATDLAGVLHMLYCVLFHGTISDPSTASPKESYAQNTIQVAIQSLRFFNSFAALDLPAFQSIVGAEGLSLAFRHIASSLLGHCSHVSCESLLHEVIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNLQNKIILEQEMSCVLLATFIQDFAQTPGQTDNQPYQPKGICMGSQDYLELANRFPQQAWEEARQFFLKKEKK", "length": 1345, "header": "tr|A0A287AL12-1|A0A287AL12_PIG Computationally mapped isoform of S-phase cyclin A associated protein in the ER OS=Sus scrofa OX=9823 GN=SCAPER PE=4 SV=2 CANONICAL=F1SJ94-1" }, "locus": { "chromosome": "7", "start_pos": 56993975, "end_pos": 56583563, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056817.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056817.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044592.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044592.2" } ] } }, { "isoform_ac": "A0A5G2QG97-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ94/entry#A0A5G2QG97-1", "sequence": { "sequence": "MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTHKTTKQNTAVDCKITPATTGDKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGGSPVAVAAPRLPPTGVSWADKVKAHHTGSTASSDVAPAQSCPPMAVQKPSRKNERKDAEGWETVQRGRPIRSRSTAVMPKVSLATEALRSKDDSDKENVRLLHDESIQKGEFVGDGPSNTIESRPKDSLHSCDHPLAERTQFTVSALDDVKNSGSSFFQDSSGQTSEIPPVHINTECVSITQQTDTPSLQANEDKFLAENVRIENEMDPSDISNSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSTSMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIIDIVVESAAPPEPSKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKAKLQRLAKDLLKQLQVQDSVSWANNKVSALDRTLGEIARILEKENVADQIAFQVAGGLTALEHILQVVVPVTNVNTVSRIPPKSLCNAINVYNLTCNNCSENCTDVLFSNKITFLMDLLIHQLTVYVPDENNAILGRNTNKQVFEGLTTGLLKVSAVVFGCLIAHRPDGNSQPTTPKISTQEMKNKPSQGDAFNSRVQDLISYVVNIGLIDKLCGCFLSVQGPVDENPKMAVFLQHAAGLLHGMCTLCFAVTGRSYSIFDNNRQDPTGLTAALQATDLAGVLHMLYCVLFHGTISDPSTASPKESYAQNTIQVAIQSLRFFNSFAALDLPAFQSIVGAEGLSLAFRHIASSLLGHCSHVSCESLLHEVIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNLQNKIILEQEMSCVLLATFIQLKSKREPAAYPCHPHYLLKFHYSCA", "length": 1376, "header": "tr|A0A5G2QG97-1|F1SJ94_PIG Computationally mapped isoform of S-phase cyclin A associated protein in the ER OS=Sus scrofa OX=9823 GN=SCAPER PE=4 SV=1 CANONICAL=F1SJ94-1" }, "locus": { "chromosome": "7", "start_pos": 56993975, "end_pos": 56589251, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090036.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090036.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063298.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063298.1" } ] } }, { "isoform_ac": "A0A5G2R3E6-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ94/entry#A0A5G2R3E6-1", "sequence": { "sequence": "MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTHKTTKQNTAVDCKITPATTGDKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGGSPVAVAAPRLPPTGVSWADKVKAHHTGSTASSDVAPAQSCPPMAVQKPSRKNERKDAEGWETVQRGRPIRSRSTAVMPKVSLATEALRSKDDSDKENVRLLHDESIQKGEFVGDGPSNTIESRPKDSLHSCDHPLAERTQFTVSALDDVKNSGSSFFQDSSGQTSEIPPVHINTECVSITQQTDTPSLQANEDKFLAENVRIENEMDPSDISNSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSTSMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIIDIVVESAAPPEPSKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKAKLQRLAKDLLKQLQVQDSVSWANNKVSALDRTLGEIARILEKENVADQIAFQVAGGLTALEHILQVVVPVTNVNTVSRIPPKSLCNAINVYNLTCNNCSENCTDVLFSNKITFLMDLLIHQLTVYVPDENNAILGRNTNKQVFEGLTTGLLKVSAVVFGCLIAHRPDGNSQPTTPKISTQEMKNKPSQGDAFNSRVQDLISYVVNIGLIDKLCGCFLSVQGPVDENPKMAVFLQHAAGLLHGMCTLCFAVTGRSYSIFDNNRQDPTGLTAALQATDLAGVLHMLYCVLFHGTISDPSTASPKESYAQNTIQVAIQSLRFFNSFAALDLPAFQSIVGAEGLSLAFRHIASSLLGHCSHVSCESLLHEVIVCVGYFTVNHPDNQTRPALEPSLEL", "length": 1298, "header": "tr|A0A5G2R3E6-1|F1SJ94_PIG Computationally mapped isoform of S-phase cyclin A associated protein in the ER OS=Sus scrofa OX=9823 GN=SCAPER PE=4 SV=1 CANONICAL=F1SJ94-1" }, "locus": { "chromosome": "7", "start_pos": 56993975, "end_pos": 56629180, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082477.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082477.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071611.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071611.1" } ] } }, { "isoform_ac": "A0A5G2R3Z9-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ94/entry#A0A5G2R3Z9-1", "sequence": { "sequence": "MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTHKTTKQVQHEQLLLFCF", "length": 76, "header": "tr|A0A5G2R3Z9-1|F1SJ94_PIG Computationally mapped isoform of S-phase cyclin A associated protein in the ER OS=Sus scrofa OX=9823 GN=SCAPER PE=4 SV=1 CANONICAL=F1SJ94-1" }, "locus": { "chromosome": "7", "start_pos": 56993975, "end_pos": 56972841, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079135.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079135.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068919.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068919.1" } ] } }, { "isoform_ac": "F1SJ94-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ94/entry#F1SJ94-1", "sequence": { "sequence": "MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKSKCQTGGKSKRTIQGTHKTTKQNTAVDCKITPATTGDKHFDKSPTKTRHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGGSPVAVAAPRLPPTGVSWADKVKAHHTGSTASSDVAPAQSCPPMAVQKPSRKNERKDAEGWETVQRGRPIRSRSTAVMPKVSLATEALRSKDDSDKENVRLLHDESIQKGEFVGDGPSNTIESRPKDSLHSCDHPLAERTQFTVSALDDVKNSGSSFFQDSSGQTSEIPPVHINTECVSITQQTDTPSLQANEDKFLAENVRIENEMDPSDISNSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSTSMGSGSVSFCGMSMDWNDVLADYEARESWRQNTSWGDIVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLLEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVLISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIIDIVVESAAPPEPSKDGEERQKNKKKAKKIKARMNFRAKEYESLMETKNSGSDSPYKAKLQRLAKDLLKQLQVQDSVSWANNKVSALDRTLGEIARILEKENVADQIAFQVAGGLTALEHILQVVVPVTNVNTVSRIPPKSLCNAINVYNLTCNNCSENCTDVLFSNKITFLMDLLIHQLTVYVPDENNAILGRNTNKQVFEGLTTGLLKVSAVVFGCLIAHRPDGNSQPTTPKISTQEMKNKPSQGDAFNSRVQDLISYVVNIGLIDKLCGCFLSVQGPVDENPKMAVFLQHAAGLLHGMCTLCFAVTGRSYSIFDNNRQDPTGLTAALQATDLAGVLHMLYCVLFHGTISDPSTASPKESYAQNTIQVAIQSLRFFNSFAALDLPAFQSIVGAEGLSLAFRHIASSLLGHCSHVSCESLLHEVIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNLQNKIILEQEMSCVLLATFIQDFAQTPGQTDNQPYQPKGICMGSQDYLELANRFPQQAWEEARQFFLKKEKK", "length": 1402, "header": "tr|F1SJ94-1|F1SJ94_PIG Isoform 1 of S-phase cyclin A associated protein in the ER OS=Sus scrofa OX=9823 GN=SCAPER PE=4 SV=4 CANONICAL=F1SJ94-1" }, "locus": { "chromosome": "7", "start_pos": 56993975, "end_pos": 56583563, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002090.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002090.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002040.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002040.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QG97", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG97" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154669", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154669", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SJ94", "url": "https://www.uniprot.org/uniprotkb/F1SJ94" } ], "pmid": "" }, { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "F1SJ94", "url": "https://www.uniprot.org/uniprotkb/F1SJ94" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F1SJ94", "url": "https://www.uniprot.org/uniprotkb/F1SJ94" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1002, "end_pos": 1004, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1006, "end_pos": 1008, "annotation": "n_glycosylation_sequon" }, { "start_pos": 470, "end_pos": 472, "annotation": "n_glycosylation_sequon" }, { "start_pos": 508, "end_pos": 510, "annotation": "n_glycosylation_sequon" }, { "start_pos": 825, "end_pos": 827, "annotation": "n_glycosylation_sequon" }, { "start_pos": 997, "end_pos": 999, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SJ94", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ94" }, { "id": "SM00451", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00451" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "U1-type", "eco_id": "ECO_0000259", "start_pos": 791, "end_pos": 825, "start_aa": "Glu", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1002, "end_pos": 1004 }, { "start_pos": 1006, "end_pos": 1008 }, { "start_pos": 470, "end_pos": 472 }, { "start_pos": 508, "end_pos": 510 }, { "start_pos": 825, "end_pos": 827 }, { "start_pos": 997, "end_pos": 999 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027359", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027359", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028747", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028747", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46923", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46923", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46923:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46923:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00520", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00520", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1300642", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1300642", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] 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"GGPGSDMATYGPTGHMQLPRADAIRSRLIDTFSLIEHLQGLSQAVPRHTIREILDPSRQKKLMLGDQHQLVRFSIKPCHVGRITHGQRLMSTLRVRCSQRPPLSLWAGWVLECPLFTNFIIFLIFLNTIVLMVEIELLESSNAQLWPLKLTLEVAAWFILLVFILEILLMWISSFFLFWKNAWNVFDFVVTILSLIPETVVLVGVTSHSVWLQLLRICRVLRSLKLFARFPQIRVIILALVRALKSMTFLLMLLLIFFYIFAVAGVYFFENYTRSTRQDLEYHMFFSDLLNSLVTVFILFTMDHWYALLQDTWKVPEVSRAFSSIYVILWLLLGSIIFRNIIVAMMVTNFQNIRNELNEEMTHLEVQHKADIFKRQIIQRRQNLSPEAQRSSLSKMDARDVSQQEEYMDLTEASEEESKHSATKEGSRASRSKIKKTLSKPKTSTSSTFFSSSSSSSSSYCSSSDSRYVDPIGQLDWETHVHQNLPGLMDMDQDERVVWPRDSLFRYFELLEKLQYNLEERKRLQEFAVQAMMNFEDK", "length": 538, "header": "tr|A0A287BL30-1|A0A287BL30_PIG Computationally mapped isoform of Cation channel sperm-associated protein 2 OS=Sus scrofa OX=9823 GN=CATSPER2 PE=3 SV=2 CANONICAL=F1SI80-1" }, "locus": { "chromosome": "1", "start_pos": 127828548, "end_pos": 127814376, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040220.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040220.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057106.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057106.2" } ] } }, { "isoform_ac": "A0A5G2QGB5-1", "url": "https://www.uniprot.org/uniprotkb/F1SI80/entry#A0A5G2QGB5-1", "sequence": { "sequence": "MATYGPTGHMQLPRADAIRSRLIDTFSLIEHLQGLSQAVPRHTIREILDPSRQKKLMLGDQHQLVRFSIKPCHVGRITHGQRLMSTLRVRCSQRPPLSLWAGWVLECPLFTNFIIFLIFLNTIVLMVEIELLESSNAQLWPLKLTLEVAAWFILLVFILEILLMWISSFFLFWKNAWNVFDFVVTILSLIPETVVLVGVTSHSVWLQLLRICRVLRSLKLFARFPQIRVIILALVRALKSMTFLLMLLLIFFYIFAVAGVYFFENYTRSTRQDLEYHMFFSDLLNSLVTVFILFTMDHWYALLQDTWKVPEVSRAFSSIYVILWLLLGSIIFRNIIVFSSLYDHNSYLFSLTTLLLQYNASPFCVSLLCRRQNLSPEAQRSSLSKMDARDVSQQEEYMDLTEASEEESKHSATKEGSRASRSKIKKTLSKPKTSTSSTFFSSSSSSSSSYCSSSDSRYVDPIGQLDWETHVHQNLPGLMDMDQDERVVWPRDSLFRYFELLEKLQYNLEERKRLQEFAGMDLGQSGD", "length": 527, "header": "tr|A0A5G2QGB5-1|F1SI80_PIG Computationally mapped isoform of Cation channel sperm-associated protein 2 OS=Sus scrofa OX=9823 GN=CATSPER2 PE=3 SV=1 CANONICAL=F1SI80-1" }, "locus": { "chromosome": "1", "start_pos": 127828105, "end_pos": 127815089, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081279.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081279.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063797.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063797.1" } ] } }, { "isoform_ac": "F1SI80-1", "url": "https://www.uniprot.org/uniprotkb/F1SI80/entry#F1SI80-1", "sequence": { "sequence": "MATYGPTGHMQLPRADAIRSRLIDTFSLIEHLQGLSQAVPRHTIREILDPSRQKKLMLGDQHQLVRFSIKPCHVGRITHGQRLMSTLRVRCSQRPPLSLWAGWVLECPLFTNFIIFLIFLNTIVLMVEIELLESSNAQLWPLKLTLEVAAWFILLVFILEILLMWISSFFLFWKNAWNVFDFVVTILSLIPETVVLVGVTSHSVWLQLLRICRVLRSLKLFARFPQIRVIILALVRALKSMTFLLMLLLIFFYIFAVAGVYFFENYTRSTRQDLEYHMFFSDLLNSLVTVFILFTMDHWYALLQDTWKVPEVSRAFSSIYVILWLLLGSIIFRNIIVAMMVTNFQNIRNELNEEMTHLEVQHKADIFKRQIIQRRQNLSPEAQRSSLSKMDASYRDVSQQEEYMDLTEASEEESKHSATKEGSRASRSKIKKTLSKPKTSTSSTFFSSSSSSSSSYCSSSDSRYVDPIGQLDWETHVHQNLPGLMDMDQDERVVWPRDSLFRYFELLEKLQYNLEERKRLQEFAVQAMMNFEDK", "length": 534, "header": "tr|F1SI80-1|F1SI80_PIG Isoform 1 of Cation channel sperm-associated protein 2 OS=Sus scrofa OX=9823 GN=CATSPER2 PE=3 SV=3 CANONICAL=F1SI80-1" }, "locus": { "chromosome": "1", "start_pos": 127828548, "end_pos": 127815089, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005191.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005191.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005065.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005065.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGB5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGB5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1300642", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1300642", "resource": "Reactome", "description": "Sperm Motility And Taxes" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "CatSper complex", "id": "GO:0036128", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036128", "evidence": [ { "database": "UniProtKB", "id": "F1SI80", "url": "https://www.uniprot.org/uniprotkb/F1SI80" } ], "pmid": "" }, { "name": "sperm principal piece", "id": "GO:0097228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097228", "evidence": [ { "database": "UniProtKB", "id": "F1SI80", "url": "https://www.uniprot.org/uniprotkb/F1SI80" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "flagellated sperm motility", "id": "GO:0030317", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030317", "evidence": [ { "database": "UniProtKB", "id": "F1SI80", "url": "https://www.uniprot.org/uniprotkb/F1SI80" } ], "pmid": "" }, { "name": "fertilization", "id": "GO:0009566", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009566", "evidence": [ { "database": "UniProtKB", "id": "F1SI80", "url": "https://www.uniprot.org/uniprotkb/F1SI80" } ], "pmid": "" }, { "name": "sperm capacitation", "id": "GO:0048240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048240", "evidence": [ { "database": "UniProtKB", "id": "F1SI80", 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"https://www.ebi.ac.uk/interpro/entry/IPR035967", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047488", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047488", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051485", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051485", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "F1SKE6", "url": "https://www.orthodb.org/?gene=F1SKE6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23140", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23140", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23140:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23140:SF0", "database": "PANTHER", 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"url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9943411", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013837562", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837562", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A4B2", "url": "https://www.uniprot.org/uniprotkb/A0A287A4B2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A4B2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A4B2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BSM7", "url": "https://www.uniprot.org/uniprotkb/A0A287BSM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BSM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BSM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIA3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QIA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8W2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8W2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8W2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8W2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKE6", "url": "https://www.uniprot.org/uniprotkb/F1SKE6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKE6-1", "url": "https://www.uniprot.org/uniprotkb/F1SKE6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESARESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH", "length": 1029, "header": "tr|F1SKE6-1|F1SKE6_PIG Isoform 1 of U2 snRNP-associated SURP motif-containing protein OS=Sus scrofa OX=9823 GN=U2SURP PE=1 SV=2 CANONICAL=F1SKE6-1" }, "isoforms": [ { "isoform_ac": "A0A287A4B2-1", "url": "https://www.uniprot.org/uniprotkb/F1SKE6/entry#A0A287A4B2-1", "sequence": { "sequence": "LELLKPGSSHCGAAETNPTRNHDMDASGPSDSDMPSRTRPKSPRKHNYRNESARESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRKPKGHTFILDLKASKK", "length": 993, "header": "tr|A0A287A4B2-1|A0A287A4B2_PIG Computationally mapped isoform of U2 snRNP-associated SURP motif-containing protein OS=Sus scrofa OX=9823 GN=U2SURP PE=1 SV=2 CANONICAL=F1SKE6-1" }, "locus": { "chromosome": "13", "start_pos": 83754686, "end_pos": 83716337, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051826.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051826.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038606.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038606.2" } ] } }, { "isoform_ac": "A0A287BSM7-1", "url": "https://www.uniprot.org/uniprotkb/F1SKE6/entry#A0A287BSM7-1", "sequence": { "sequence": "MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESARESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH", "length": 970, "header": "tr|A0A287BSM7-1|A0A287BSM7_PIG Computationally mapped isoform of U2 snRNP-associated SURP motif-containing protein OS=Sus scrofa OX=9823 GN=U2SURP PE=1 SV=1 CANONICAL=F1SKE6-1" }, "locus": { "chromosome": "13", "start_pos": 83755745, "end_pos": 83704611, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055076.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055076.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059178.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059178.1" } ] } }, { "isoform_ac": "A0A5G2QIA3-1", "url": "https://www.uniprot.org/uniprotkb/F1SKE6/entry#A0A5G2QIA3-1", "sequence": { "sequence": "LELLKPGSSHCGAAETNPTRNHDMDASGPSDSDMPSRTRPKSPRKHNYRNESARESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKESCGAGLIPGPGTSACCGHPPLPKNSQMSFTHLPRMLKCFSFCFIFFFPCLSLLSPNHLRVACLHDAPFSYSTTIKVSR", "length": 995, "header": "tr|A0A5G2QIA3-1|F1SKE6_PIG Computationally mapped isoform of U2 snRNP-associated SURP motif-containing protein OS=Sus scrofa OX=9823 GN=U2SURP PE=1 SV=1 CANONICAL=F1SKE6-1" }, "locus": { "chromosome": "13", "start_pos": 83753970, "end_pos": 83716337, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083316.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083316.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061748.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061748.1" } ] } }, { "isoform_ac": "A0A8W4F8W2-1", "url": "https://www.uniprot.org/uniprotkb/F1SKE6/entry#A0A8W4F8W2-1", "sequence": { "sequence": "MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESARESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPSVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH", "length": 997, "header": "tr|A0A8W4F8W2-1|A0A8W4F8W2_PIG Computationally mapped isoform of U2 snRNP-associated SURP motif-containing protein OS=Sus scrofa OX=9823 GN=U2SURP PE=1 SV=1 CANONICAL=F1SKE6-1" }, "locus": { "chromosome": "13", "start_pos": 83755745, "end_pos": 83704611, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095818.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095818.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074745.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074745.1" } ] } }, { "isoform_ac": "F1SKE6-1", "url": "https://www.uniprot.org/uniprotkb/F1SKE6/entry#F1SKE6-1", "sequence": { "sequence": "MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESARESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH", "length": 1029, "header": "tr|F1SKE6-1|F1SKE6_PIG Isoform 1 of U2 snRNP-associated SURP motif-containing protein OS=Sus scrofa OX=9823 GN=U2SURP PE=1 SV=2 CANONICAL=F1SKE6-1" }, "locus": { "chromosome": "13", "start_pos": 83755745, "end_pos": 83704611, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012792.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012792.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012455.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012455.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QIA3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QIA3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" }, { "id": "R-SSC-9770562", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770562", "resource": "Reactome", "description": "mRNA Polyadenylation" }, { "id": "R-SSC-9943411", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9943411", "resource": "Reactome", "description": "CHD1 and CHD2 subfamily" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F1SKE6", "url": "https://www.uniprot.org/uniprotkb/F1SKE6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SKE6", "url": "https://www.uniprot.org/uniprotkb/F1SKE6" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SKE6", "url": "https://www.uniprot.org/uniprotkb/F1SKE6" } ], "pmid": "" }, { "name": "U2 snRNP", "id": "GO:0005686", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005686", "evidence": [ { "database": "UniProtKB", "id": "F1SKE6", "url": "https://www.uniprot.org/uniprotkb/F1SKE6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "RNA processing", "id": "GO:0006396", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006396", "evidence": [ { "database": "UniProtKB", "id": "F1SKE6", "url": "https://www.uniprot.org/uniprotkb/F1SKE6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 172, "end_pos": 174, "annotation": "n_glycosylation_sequon" }, { "start_pos": 252, "end_pos": 254, "annotation": "n_glycosylation_sequon" }, { "start_pos": 465, "end_pos": 467, "annotation": "n_glycosylation_sequon" }, { "start_pos": 499, "end_pos": 501, "annotation": "n_glycosylation_sequon" }, { "start_pos": 57, "end_pos": 59, "annotation": "n_glycosylation_sequon" }, { "start_pos": 604, "end_pos": 606, "annotation": "n_glycosylation_sequon" }, { "start_pos": 611, "end_pos": 613, "annotation": 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"protein_names": [ { "name": "Serine hydrolase RBBP9", "type": "recommended", "evidence": [ { "id": "F1SBH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBH3/entry#names_and_taxonomy" } ] }, { "name": "B5T-overexpressed gene protein", "type": "synonym", "evidence": [ { "id": "F1SBH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBH3/entry#names_and_taxonomy" } ] }, { "name": "Retinoblastoma-binding protein 9", "type": "synonym", "evidence": [ { "id": "F1SBH3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBH3/entry#names_and_taxonomy" } ] }, { "name": "putative hydrolase RBBP9", "type": "synonym", "evidence": [ { "id": "XP_003483948", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483948" } ] } ], "function": [ { "annotation": "Serine hydrolase. Catalyzes the hydrolytic activation of amino acid ester of the antiviral prodrug valacyclovir to its corresponding active drug, acyclovir. May negatively regulate basal or autocrine TGF-beta signaling by suppressing SMAD2-SMAD3 phosphorylation. May play a role in the transformation process due to its capacity to confer resistance to the growth-inhibitory effects of TGF-beta through interaction with RB1 and the subsequent displacement of E2F1.", "evidence": [ { "database": "UniProtKB", "id": "F1SBH3", "url": "https://www.uniprot.org/uniprotkb/F1SBH3#function" }, { "database": "UniProtKB", "id": "ARBA00093284", "url": "https://www.uniprot.org/uniprotkb/ARBA00093284#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBH3", "url": "https://www.uniprot.org/uniprotkb/F1SBH3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RBBP9", "url": "https://www.uniprot.org/uniprotkb/F1SBH3", "locus": { "chromosome": "17", "start_pos": 26736526, "end_pos": 26760242, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029494", "url": "https://www.ensembl.org/id/ENSSSCG00000029494" } ] } } ], "crossref": [ { "id": "ENSSSCG00000029494", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029494", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100738866", "url": "https://www.ncbi.nlm.nih.gov/gene/100738866", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010662", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010662", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738866", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738866", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NRPWEWE", "url": "https://omabrowser.org/oma/group/NRPWEWE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SBH3", "url": "https://www.orthodb.org/?gene=F1SBH3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15394:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15394:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06821", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06821", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003483948", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483948", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "83871", "url": "https://www.rhea-db.org/rhea/83871", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QJS0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJS0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJS0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBH3", "url": "https://www.uniprot.org/uniprotkb/F1SBH3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBH3-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASPSKAVIVPGNGGGDVATHGWYGWVKKRLEQIPGFQCLAKNMPDPITARESIWLPFMETELRCDEETIIIGHSSGAIAAMRYAETHRVYAIVLVSAYTSDLGDENERASGYFSRPWQWEKIKANCPHIVQFGSTDDPFLPWKEQQEVADRLEAKLYSFTDRGHFQNTEFHELVNVVKSLLKVQA", "length": 186, "header": "tr|F1SBH3-1|F1SBH3_PIG Isoform 1 of Serine hydrolase RBBP9 OS=Sus scrofa OX=9823 GN=RBBP9 PE=1 SV=1 CANONICAL=F1SBH3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH3/entry#A0A5G2QJS0-1", "sequence": { "sequence": "MAPEEGVFPREGARSWPERDVSTREGQGGESLGTHAHEIPVSSSGKVSFIKLQGFLPSQCPVTSSLRSPTLVHSSSQSLLYFHVKIPGFQCLAKNMPDPITARESIWLPFMETELRCDEETIIIGHSSGAIAAMRYAETHRVYAIVLVSAYTSDLGDENERASGYFSRPWQWEKIKANCPHIVQFGSTDDPFLPWKEQQEVADRLEAKLYSFTDRGHFQNTEFHELVNVVKSLLKVQA", "length": 238, "header": "tr|A0A5G2QJS0-1|F1SBH3_PIG Computationally mapped isoform of Serine hydrolase RBBP9 OS=Sus scrofa OX=9823 GN=RBBP9 PE=1 SV=1 CANONICAL=F1SBH3-1" }, "locus": { "chromosome": "17", "start_pos": 26760043, "end_pos": 26742356, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081744.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081744.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064202.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064202.1" } ] } }, { "isoform_ac": "F1SBH3-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH3/entry#F1SBH3-1", "sequence": { "sequence": "MASPSKAVIVPGNGGGDVATHGWYGWVKKRLEQIPGFQCLAKNMPDPITARESIWLPFMETELRCDEETIIIGHSSGAIAAMRYAETHRVYAIVLVSAYTSDLGDENERASGYFSRPWQWEKIKANCPHIVQFGSTDDPFLPWKEQQEVADRLEAKLYSFTDRGHFQNTEFHELVNVVKSLLKVQA", "length": 186, "header": "tr|F1SBH3-1|F1SBH3_PIG Isoform 1 of Serine hydrolase RBBP9 OS=Sus scrofa OX=9823 GN=RBBP9 PE=1 SV=1 CANONICAL=F1SBH3-1" }, "locus": { "chromosome": "17", "start_pos": 26749642, "end_pos": 26742356, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029409.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029409.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024117.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024117.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJS0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJS0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738866", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738866", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9SZ65-1", "protein_name": "Serine hydrolase RBBP9", "gene_name": "RBBP9", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAPCKAVIIPGNGGEDVATHGWYGWVKRELEQIPGFQCLSKNMPDPITARESIWLPFMEMELHCDEETIIIGHSSGAIAAMRYAETHRVYAIVLVAAYTSDLGDANERASGYFSRPWQWEKIKANCPHIVQFGSTDDPFLPWKEQQEVADRLEAKLYKFTDRGHFQNTEFHELVSAVGSMLKVPA", "length": 186 }, "evidence": [ { "id": "F1SBH3", "url": "https://omabrowser.org/oma/group/F1SBH3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3GVW2-1", "protein_name": "Serine hydrolase RBBP9", "gene_name": "Rbbp9", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAFPVKAVIVPGNGGGDVATQGWYGWVRKRLEQIPGFQCLAKNMPDPITARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHQVYGLVLVSAYTSDLGDENERASGYFSRPWQWEKIKANCPHIVQFGSTDDPFLPWKEQAEVADRLNAKLYKFDNRGHFQNTEFHELISVVKSMLKVPE", "length": 186 }, "evidence": [ { "id": "F1SBH3", "url": "https://omabrowser.org/oma/group/F1SBH3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O75884-1", "protein_name": "Serine hydrolase RBBP9", "gene_name": "RBBP9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHRVYAIVLVSAYTSDLGDENERASGYFTRPWQWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRLETKLHKFTDCGHFQNTEFHELITVVKSLLKVPA", "length": 186 }, "evidence": [ { "id": "F1SBH3", "url": "https://omabrowser.org/oma/group/F1SBH3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O88350-1", "protein_name": "Serine hydrolase RBBP9", "gene_name": "Rbbp9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASPTKAVIVPGNGGGDVATHGWYGWVRKGLEQIPGFQCLAKNMPDPITARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHQVYALILVSAYTSDLGDENERASGYFSRPWQWEKIKANCPHIIQFGSTDDPFLPWKEQQEVADRLDAKLYKFTDRGHFQNTEFHELIRVVKSMLTPAL", "length": 186 }, "evidence": [ { "id": "F1SBH3", "url": "https://omabrowser.org/oma/group/F1SBH3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O88851-1", "protein_name": "Serine hydrolase RBBP9", "gene_name": "Rbbp9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASPNKAVIVPGNGGGDVATHGWYGWVKKGLEQIPGFQCLAKNMPDPITARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHQVYALVLVSAYTSDLGDENERASGYFSRPWQWEKIKANCPHIVQFGSTDDPFLPWKEQQEVADRLDAKLYKFTDRGHFQNTEFHELISVVKSMLKGPE", "length": 186 }, "evidence": [ { "id": "F1SBH3", "url": "https://omabrowser.org/oma/group/F1SBH3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SBH3", "url": "https://www.uniprot.org/uniprotkb/F1SBH3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "xenobiotic metabolic process", "id": "GO:0006805", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006805", "evidence": [ { "database": "UniProtKB", "id": "F1SBH3", "url": "https://www.uniprot.org/uniprotkb/F1SBH3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "serine hydrolase activity", "id": "GO:0017171", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017171", "evidence": [ { "database": "UniProtKB", "id": "F1SBH3", "url": "https://www.uniprot.org/uniprotkb/F1SBH3" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F1SBH3", "url": "https://www.uniprot.org/uniprotkb/F1SBH3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "83871", "name": "", "equation": "valacyclovir + H2O = acyclovir + L-valine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "83871", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/83871" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SCJ4-1", "uniprot_ac": "F1SCJ4", "uniprot_id": "F1SCJ4_PIG", "mass": { "chemical_mass": 64975.0, "monoisotopic_mass": 64975.0 }, "refseq": { "ac": "XP_003480856", "name": "mucolipin-1 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480856" }, "gene_names": [ { "name": "MCOLN1", "type": "recommended", "evidence": [ { "id": "F1SCJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ] }, { "name": "MCOLN1", "type": "synonym", "evidence": [ { "id": "XP_003480856", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480856" } ] } ], "protein_names": [ { "name": "Mucolipin TRP cation channel 1", "type": "synonym", "evidence": [ { "id": "F1SCJ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4/entry#names_and_taxonomy" } ] }, { "name": "mucolipin-1 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_003480856", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480856" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MCOLN1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4", "locus": { "chromosome": "2", "start_pos": 71602770, "end_pos": 71613312, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013570", "url": "https://www.ensembl.org/id/ENSSSCG00000013570" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013570", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013570", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21070", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21070", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524240", "url": "https://www.ncbi.nlm.nih.gov/gene/100524240", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013122", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013122", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039031", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039031", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047316", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047316", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049134", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049134", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524240", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524240", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SPMQENV", "url": "https://omabrowser.org/oma/group/SPMQENV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SCJ4", "url": "https://www.orthodb.org/?gene=F1SCJ4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12127", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12127", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12127:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12127:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08016", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08016", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21381", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21381", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3295583", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3295583", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-917977", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-917977", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003480856", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480856", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "29671", "url": "https://www.rhea-db.org/rhea/29671", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A0W7", "url": "https://www.uniprot.org/uniprotkb/A0A287A0W7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0W7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0W7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMC5", "url": "https://www.uniprot.org/uniprotkb/A0A287AMC5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMC5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMC5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLA2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLA2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLA2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLA2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9X6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9X6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9X6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9X6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCJ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVPVGPRGSETEHLLTPSPGYGTQAGASPAPETPPEEEDLRRRLKYFFMSPCDKFRAKGRKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAYTREQLYQSIFYAVDQYLLLPDMSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPANDTFDIDPMVVTDCIRVDPPERPPVPPSDDLGLSDGSTSYKNLTLKFHKLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLLFDVVVILTCSFSFLLCARSLLRGFLLQNEFVRFIRRKRGRVVSLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRDASEEHSLLVN", "length": 580, "header": "tr|F1SCJ4-1|F1SCJ4_PIG Isoform 1 of Mucolipin TRP cation channel 1 OS=Sus scrofa OX=9823 GN=MCOLN1 PE=1 SV=1 CANONICAL=F1SCJ4-1" }, "isoforms": [ { "isoform_ac": "A0A287A0W7-1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4/entry#A0A287A0W7-1", "sequence": { "sequence": "MAVPVGPRGSETEHLLTPSPGYGTQAGASPAPETPPEEEDLRRRLKYFFMSPCDKFRAKGRKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAYTREQLYQSIFYAVDQYLLLPDMSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPANDTFDIDPMVVTDCIRVDPPERPPVPPSDDLGLSDGSTSYKNLTLKFHKYCPIKGVEGGGRQDHRHLQWGRITPPFPRAATSPQAGAGSASLMLPSEHFLCQLQSQHGAEGWPLGAAGSGRAPSPSPKPPPRLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLLFDVVVILTCSFSFLLCARSLLRGFLLQNEFVRFIRRKRGRVVSLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRLETGLARVWDWLREGKRARGN", "length": 673, "header": "tr|A0A287A0W7-1|A0A287A0W7_PIG Computationally mapped isoform of Mucolipin TRP cation channel 1 OS=Sus scrofa OX=9823 GN=MCOLN1 PE=1 SV=2 CANONICAL=F1SCJ4-1" }, "locus": { "chromosome": "2", "start_pos": 71613179, "end_pos": 71603160, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051837.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051837.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037558.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037558.2" } ] } }, { "isoform_ac": "A0A287AMC5-1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4/entry#A0A287AMC5-1", "sequence": { "sequence": "MCPENAVNFLVFLRSPEFFLGRSLGSASPVGRWPCLGLVPTALSHPTETEHLLTPSPGYGTQAGASPAPETPPEEEDLRRRLKYFFMSPCDKFRAKGRKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAYTREQLYQSIFYAVDQYLLLPDMSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPANDTFDIDPMVVTGDRVLGTWKELSPPPRLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLLFDVVVILTCSFSFLLCARSLLRGFLLQNEFVRFIRRKRGRVVSLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRLETGLARVWDWLREGKRARGN", "length": 606, "header": "tr|A0A287AMC5-1|A0A287AMC5_PIG Computationally mapped isoform of Mucolipin TRP cation channel 1 OS=Sus scrofa OX=9823 GN=MCOLN1 PE=1 SV=2 CANONICAL=F1SCJ4-1" }, "locus": { "chromosome": "2", "start_pos": 71611584, "end_pos": 71603160, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051542.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051542.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045038.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045038.3" } ] } }, { "isoform_ac": "A0A5G2QLA2-1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4/entry#A0A5G2QLA2-1", "sequence": { "sequence": "MFILVAVPETEHLLTPSPGYGTQAGASPAPETPPEEEDLRRRLKYFFMSPCDKFRAKGRKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAYTREQLYQSIFYAVDQYLLLPDMSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPANDTFDIDPMVVTDCIRVDPPERPPVPPSDDLGLSDGSTSYKNLTLKFHKYCPIKGVEGGGRQDHRHLQWGRITPPFPRAATSPQAGAGSASLMLPSEHFLCQLQSQHGAEGWPLGAAGSGRAPSPSPKPPPRLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLLFDVVVILTCSFSFLLCARSLLRGFLLQNEFVRFIRRKRGRVVSLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRDASEEHSLLVN", "length": 661, "header": "tr|A0A5G2QLA2-1|F1SCJ4_PIG Computationally mapped isoform of Mucolipin TRP cation channel 1 OS=Sus scrofa OX=9823 GN=MCOLN1 PE=1 SV=1 CANONICAL=F1SCJ4-1" }, "locus": { "chromosome": "2", "start_pos": 71611987, "end_pos": 71603087, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076513.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076513.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064805.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064805.1" } ] } }, { "isoform_ac": "A0A8W4F9X6-1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4/entry#A0A8W4F9X6-1", "sequence": { "sequence": "MCPENAVNFLVFLRSPEFFLGRSLGSASPVGRWPCLGLVPTALSHPTETEHLLTPSPGYGTQAGASPAPETPPEEEDLRRRLKYFFMSPCDKFRAKGRKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAYTREQLYQSIFYAVDQYLLLPDMSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPANDTFDIDPMVVTDCIRVDPPERPPVPPSDDLGLSDGSTSYKNLTLKFHKYCPIKGVEGGGRQDHRHLQWGRITPPFPRAATSPQAGAGSASLMLPSEHFLCQLQSQHGAEGWPLGAAGSGRAPSPSPKPPPRLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLLFDVVVILTCSFSFLLCARSLLRGFLLQNEFVRFIRRKRGRVVSLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRLETGLARVWDWLREGKRARGN", "length": 710, "header": "tr|A0A8W4F9X6-1|A0A8W4F9X6_PIG Computationally mapped isoform of Mucolipin TRP cation channel 1 OS=Sus scrofa OX=9823 GN=MCOLN1 PE=1 SV=1 CANONICAL=F1SCJ4-1" }, "locus": { "chromosome": "2", "start_pos": 71611584, "end_pos": 71603160, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105548.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105548.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076128.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076128.1" } ] } }, { "isoform_ac": "F1SCJ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4/entry#F1SCJ4-1", "sequence": { "sequence": "MAVPVGPRGSETEHLLTPSPGYGTQAGASPAPETPPEEEDLRRRLKYFFMSPCDKFRAKGRKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAYTREQLYQSIFYAVDQYLLLPDMSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPANDTFDIDPMVVTDCIRVDPPERPPVPPSDDLGLSDGSTSYKNLTLKFHKLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLLFDVVVILTCSFSFLLCARSLLRGFLLQNEFVRFIRRKRGRVVSLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRDASEEHSLLVN", "length": 580, "header": "tr|F1SCJ4-1|F1SCJ4_PIG Isoform 1 of Mucolipin TRP cation channel 1 OS=Sus scrofa OX=9823 GN=MCOLN1 PE=1 SV=1 CANONICAL=F1SCJ4-1" }, "locus": { "chromosome": "2", "start_pos": 71613179, "end_pos": 71603087, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014822.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014822.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014421.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014421.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLA2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLA2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524240", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524240", "resource": "KEGG Pathway" }, { "id": "R-SSC-3295583", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3295583", "resource": "Reactome", "description": "TRP channels" }, { "id": "R-SSC-917977", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-917977", "resource": "Reactome", "description": "Transferrin endocytosis and recycling" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XA19-1", "protein_name": "Mucolipin TRP cation channel 1", "gene_name": "MCOLN1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPSETERLLSRAPGYGATEAPAAVEEEEEEEELRRRLKYFFMSPCDKYRARGRRPVKLGLQLAKILLVTVQLILFGLSNQMVVTFKEENTIAFKHLFLKDYVDGADDSYAVYTQHDLYDRVFYAVDKYLAIPNETIGRYAYVRGQSGGNQSALMLCQQYYRRGRIDPANDTFNIDPKIVTDCLGVDPEDPHPLPPELDRSYKNFTFKFHKLINVTIQFKLKAINIQTIINNEIPDCYTFTITITFDNKAHSGRVKIHLDNRADIKECKDHSVFGRGDNSFRLFFDVVVILVCSLSFILCARSIIRGLMLQHEFSQFFQRRYNQSVCLSDRMEFLNGWYILLVISDVLTVLGTIMKIGIESKNFADYDVCSILLGTSTLLVWVGVIRYLTFFQKYNILIVTLRVALPNVIRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFITFAEMQQNSYLVWLFSQIYLYTFISLFIYMVLSLFIALITGSYETIKHQCEGETPVSQLHAYIAECKDSPKSGKYRRDSASTCSVFCCCERAPLQDNALLVN", "length": 562 }, "evidence": [ { "id": "F1SCJ4", "url": "https://omabrowser.org/oma/group/F1SCJ4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3MY82-1", "protein_name": "Mucolipin TRP cation channel 1", "gene_name": "MCOLN1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVPVGPRGSETERLLTPSPGYGTQTGASPAPSTPPEEEDLRRRLKYFFMSPCDKFRAKGRKPFKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYTDGADDTFAAYTRQQLYQAIFYAVDQYLTLPDVSLGRYAYVRGGGGPWANGSALALCQCYYHRGHVDPANDTFDIDPMVVTDCIRVDPPERPPVPPSDDFSLSDGSASYRNLTLKFHKLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRVPISLETQAHIQECKHPSVFGHGDNSFRLLFDVVVILTCAFSFLLCARSLLRGFLLQNEFVRFMWRRRGRVISLWERLEFVNGWYILLVTSDMLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQSRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGAGAEVSELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRDASEEHSLLVN", "length": 580 }, "evidence": [ { "id": "F1SCJ4", "url": "https://omabrowser.org/oma/group/F1SCJ4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q99J21-1", "protein_name": "Mucolipin-1", "gene_name": "Mcoln1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATPAGRRASETERLLTPNPGYGTQVGTSPAPTTPTEEEDLRRRLKYFFMSPCDKFRAKGRKPCKLMLQVVKILVVTVQLILFGLSNQLVVTFREENTIAFRHLFLLGYSDGSDDTFAAYTQEQLYQAIFYAVDQYLILPEISLGRYAYVRGGGGPWANGSALALCQRYYHRGHVDPANDTFDIDPRVVTDCIQVDPPDRPPDIPSEDLDFLDGSASYKNLTLKFHKLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRIPIRLETKTHIQECKHPSVSRHGDNSFRLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVVFMWRRRGREISLWERLEFVNGWYILLVTSDVLTISGTVMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHKYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGHSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGTGTEKSELQAYIEQCQDSPTSGKFRRGSGSACSLFCCCGRDSPEDHSLLVN", "length": 580 }, "evidence": [ { "id": "F1SCJ4", "url": "https://omabrowser.org/oma/group/F1SCJ4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9GZU1-1", "protein_name": "Mucolipin-1", "gene_name": "MCOLN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTAPAGPRGSETERLLTPNPGYGTQAGPSPAPPTPPEEEDLRRRLKYFFMSPCDKFRAKGRKPCKLMLQVVKILVVTVQLILFGLSNQLAVTFREENTIAFRHLFLLGYSDGADDTFAAYTREQLYQAIFHAVDQYLALPDVSLGRYAYVRGGGDPWTNGSGLALCQRYYHRGHVDPANDTFDIDPMVVTDCIQVDPPERPPPPPSDDLTLLESSSSYKNLTLKFHKLVNVTIHFRLKTINLQSLINNEIPDCYTFSVLITFDNKAHSGRIPISLETQAHIQECKHPSVFQHGDNSFRLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVGFMWRQRGRVISLWERLEFVNGWYILLVTSDVLTISGTIMKIGIEAKNLASYDVCSILLGTSTLLVWVGVIRYLTFFHNYNILIATLRVALPSVMRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFAAMQAQQGRSSLVWLFSQLYLYSFISLFIYMVLSLFIALITGAYDTIKHPGGAGAEESELQAYIAQCQDSPTSGKFRRGSGSACSLLCCCGRDPSEEHSLLVN", "length": 580 }, "evidence": [ { "id": "F1SCJ4", "url": "https://omabrowser.org/oma/group/F1SCJ4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VW35-1", "protein_name": "Transient receptor potential cation channel, mucolipin", "gene_name": "Trpml", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MQSYGPGAQTAPAVKRRTDSYEAAQQQQQSPESDEEYVNTRILRRQVQLQSTPVAPVVPMPISAGSGTAPPSVDGREEQPEFPGSSAASYQEERMRRKLQFFFMNPIEKWQAKRKFPYKFVVQIVKIFLVTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGWDSSREVESYPPAVGPFALYLKSEFFDTVQYAVNGYANVSRSIGPYDYPTPNNTMPPLKLCLQNYREGTIFGFNESYIFDPHIDEVCERLPPNVTTIGVENYLRQRDVEVNFASLVSAQLTFKIKTVNFKANGGPLSAPDCFRFDISITFNNRDHDGQMLLSLDAEATRLKCHGATDFISDANFDSMLRSVLNIFVLLTCALSFALCTRALWRAYLLRCTTVNFFRSQFGKELSFDGRLEFVNFWYIMIIFNDVLLIIGSALKEQIEGRYLVVDQWDTCSLFLGIGNLLVWFGVLRYLGFFKTYNVVILTLKKAAPKILRFLIAALLIYAGFVFCGWLILGPYHMKFRSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIYLYSFISLYIYVVLSLFIAVIMDAYDTIKAYYKDGFPTTDLKAFVGTRTAEDISSGVFMTDLDDFDQTSFLDVVKSICCCGRCGRHQEPAQPNSGYTSLSSIMK", "length": 652 }, "evidence": [ { "id": "F1SCJ4", "url": "https://omabrowser.org/oma/group/F1SCJ4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "lysosomal membrane", "id": "GO:0005765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005765", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "receptor complex", "id": "GO:0043235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043235", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 9, "go_terms": [ { "name": "monoatomic cation channel activity", "id": "GO:0005261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005261", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "NAADP-sensitive calcium-release channel activity", "id": "GO:0072345", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072345", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "potassium channel activity", "id": "GO:0005267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005267", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "monoatomic anion channel activity", "id": "GO:0005253", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005253", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "sodium channel activity", "id": "GO:0005272", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005272", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "iron ion transmembrane transporter activity", "id": "GO:0005381", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005381", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "ligand-gated calcium channel activity", "id": "GO:0099604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099604", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity", "id": "GO:0097682", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097682", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "phagosome maturation", "id": "GO:0090382", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090382", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "protein homotetramerization", "id": "GO:0051289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051289", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": 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"https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" }, { "name": "positive regulation of lysosome organization", "id": "GO:1905673", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905673", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ4", "url": "https://www.uniprot.org/uniprotkb/F1SCJ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 179, "end_pos": 181, "annotation": "n_glycosylation_sequon" }, { "start_pos": 220, "end_pos": 222, "annotation": "n_glycosylation_sequon" }, { "start_pos": 230, "end_pos": 232, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "29671", "name": "", "equation": "Ca(2+)(in) = Ca(2+)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "29671", "database": "Rhea", "url": 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"end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 159, "end_pos": 161 }, { "start_pos": 179, "end_pos": 181 }, { "start_pos": 220, "end_pos": 222 }, { "start_pos": 230, "end_pos": 232 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SCL5-1", "uniprot_ac": "F1SCL5", "uniprot_id": "F1SCL5_PIG", "mass": { "chemical_mass": 34667.0, "monoisotopic_mass": 34667.0 }, "refseq": { "ac": "NP_001177110", "name": "KATNB1-like protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177110" }, "gene_names": [ { "name": "KATNBL1", "type": "recommended", "evidence": [ { "id": "F1SCL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ] }, { "name": "C15orf29", "type": "synonym", "evidence": [ { "id": "NP_001177110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177110" } ] }, { "name": "C7H15orf29", "type": "synonym", "evidence": [ { "id": "NP_001177110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177110" } ] }, { "name": "KATNBL1", "type": "synonym", "evidence": [ { "id": "NP_001177110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177110" } ] } ], "protein_names": [ { "name": "KATNB1-like protein 1", "type": "synonym", "evidence": [ { "id": "NP_001177110", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177110" } ] }, { "name": "Katanin regulatory subunit B1 like 1", "type": "synonym", "evidence": [ { "id": "F1SCL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCL5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KATNBL1", "url": "https://www.uniprot.org/uniprotkb/F1SCL5", "locus": { "chromosome": "7", "start_pos": 80383037, "end_pos": 80288066, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002245", "url": "https://www.ensembl.org/id/ENSSSCG00000002245" } ] } } ], "crossref": [ { "id": "ENSSSCG00000002245", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002245", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154146", "url": "https://www.ncbi.nlm.nih.gov/gene/100154146", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR028021", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042404", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042404", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154146", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154146", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DSCAEDR", "url": "https://omabrowser.org/oma/group/DSCAEDR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2RBU7", "url": "https://www.orthodb.org/?gene=A0A5G2RBU7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SCL5", "url": "https://www.orthodb.org/?gene=F1SCL5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14682", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14682", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14682:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14682:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13925", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13925", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001177110", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001177110", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QLV1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLV1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QLV1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLV1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBU7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBU7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBU7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCL5-1", "url": "https://www.uniprot.org/uniprotkb/F1SCL5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASETHNVKKCNSCNNIEDHSIDLPRKRISNFTNKNMKEVKKSPKQLAAYITRTVGQAVKSPDKLRKVIYRRKKVHHPFPNPCYRRKQSPRSGGCDMANKENELACAGHLPEKLRHDSRTYSVNSSDSSSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNLRLNVALTFWRKRSISELVAYLVRIEDLGVVVDCLPVLTNSLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYLLQLH", "length": 304, "header": "tr|F1SCL5-1|F1SCL5_PIG Isoform 1 of Katanin regulatory subunit B1 like 1 OS=Sus scrofa OX=9823 GN=KATNBL1 PE=4 SV=1 CANONICAL=F1SCL5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QLV1-1", "url": "https://www.uniprot.org/uniprotkb/F1SCL5/entry#A0A5G2QLV1-1", "sequence": { "sequence": "MASETHNVKKCNSCNNIEDHSIDLPRKRISNFTNKNMKEVKKSPKQLAAYITRTVGQAVKSPDKLRKVIYRRKKVHHPFPNPCYRRKQSPRSGGCDMANKENELACAGHLPEKLRHDSRTYSVNSSDSSSSQTESPSSKYSGFFSEMLIYYSCIENLHLLNSIWSFKTSLDIPQKCFI", "length": 178, "header": "tr|A0A5G2QLV1-1|F1SCL5_PIG Computationally mapped isoform of Katanin regulatory subunit B1 like 1 OS=Sus scrofa OX=9823 GN=KATNBL1 PE=4 SV=1 CANONICAL=F1SCL5-1" }, "locus": { "chromosome": "7", "start_pos": 80347454, "end_pos": 80336820, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078407.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078407.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063060.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063060.1" } ] } }, { "isoform_ac": "A0A5G2RBU7-1", "url": "https://www.uniprot.org/uniprotkb/F1SCL5/entry#A0A5G2RBU7-1", "sequence": { "sequence": "MASETHNVKKCNSCNNIEDHSIDLPRKRISNFTNKNMKEVKKSPKQLAAYITRTVGQAVKSPDKLRKVIYRRKKVHHPFPNPCYRRKQSPRSGGCDMANKENELACAGHLPEKLRHDSRTYSVNSSDSSSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNLRLNVALTFWRKRSISELVAYLVRIEDLGVVVDCLPVLTNSLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKTVVTVWIYTNAKKS", "length": 308, "header": "tr|A0A5G2RBU7-1|A0A5G2RBU7_PIG Computationally mapped isoform of Katanin regulatory subunit B1 like 1 OS=Sus scrofa OX=9823 GN=KATNBL1 PE=4 SV=1 CANONICAL=F1SCL5-1" }, "locus": { "chromosome": "7", "start_pos": 80352027, "end_pos": 80336820, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089103.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089103.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073825.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073825.1" } ] } }, { "isoform_ac": "F1SCL5-1", "url": "https://www.uniprot.org/uniprotkb/F1SCL5/entry#F1SCL5-1", "sequence": { "sequence": "MASETHNVKKCNSCNNIEDHSIDLPRKRISNFTNKNMKEVKKSPKQLAAYITRTVGQAVKSPDKLRKVIYRRKKVHHPFPNPCYRRKQSPRSGGCDMANKENELACAGHLPEKLRHDSRTYSVNSSDSSSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNLRLNVALTFWRKRSISELVAYLVRIEDLGVVVDCLPVLTNSLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYLLQLH", "length": 304, "header": "tr|F1SCL5-1|F1SCL5_PIG Isoform 1 of Katanin regulatory subunit B1 like 1 OS=Sus scrofa OX=9823 GN=KATNBL1 PE=4 SV=1 CANONICAL=F1SCL5-1" }, "locus": { "chromosome": "7", "start_pos": 80347381, "end_pos": 80336820, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002500.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002500.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002438.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002438.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QLV1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QLV1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154146", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154146", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZAG1-1", "protein_name": "Katanin regulatory subunit B1 like 1", "gene_name": "KATNBL1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASEAHNAKKQKVLHIEGRPVDLPRKAISSSTKKIMKEDKKAPKQLASYTNRITVGKTVTSPLSLFKAVHCKRKVHCYTAKPCYKRKQFPKSRGCNMANKENELACAGNLPAKLNDSRTHLLNSGDSGSSQTEGPSSKYSAFFSEVSQDHETMAQVLFSRNLRLNVALTFWRRRSISELVAYLLRIQDLGVVVDCLPVLTNSLQEEKPYISVGCCVDLLPLVKSLLKSKYEEYVIVGLNWLQAVIKRWWSELSAHKERAEDGNMIILKQQLSELWEQEHHLTLVPGYTGNIAKEVNAYLLQLC", "length": 303 }, "evidence": [ { "id": "F1SCL5", "url": "https://omabrowser.org/oma/group/F1SCL5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B1WBZ9-1", "protein_name": "Katanin regulatory subunit B1 like 1", "gene_name": "Katnbl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAFDTHHVKKRNFSNSIDLPRKRISNFTSKNMKEVKISPKQLAAYISRTVGQAVKSPDKLRKVLYHRKLVRHSFPNPCYKTKQSPRSGGCDMANKENELACAGHLPENLHHDSRTFVINTSDSGSSQTENPSSKYSGFFSEVSQDHETMAQVLFSRNLRLNVALTFWRKRSVSELVAYLVRIEDLGVVVDCLPVLTNSLQEEKQCISLGCCVDLFPLVKSLLQSRFEEYVIVGLNWLQAVIKRWWSELSSKSEIISDGNIKILKQQLNGLWEQENHLTLVPGYTGNIAKDVDAYLLQLH", "length": 299 }, "evidence": [ { "id": "F1SCL5", "url": "https://omabrowser.org/oma/group/F1SCL5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HIG9-1", "protein_name": "KATNB1-like protein 1", "gene_name": "Katnbl1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASDTHHVKKRNFSNSVEDHPIDLPRKRISNFTSKNMKEVKKSPKQLAAYISRTVGQAVKSPDKLRKVLYHRKLVRHPFPNPCYRTKQSPKSGGCDMANKENELACAGHLPENLRHDSRTFVVNASDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNLRLNVALTFWRKRSISELVAYLVRIEDLGVVVDCLPVLTNSLQEEKQYISLGCCVDLLPLVKSLLQSKFEEYVIVGLNWLQAVIKRWWSELSSKSEITSDGNIKILKQQLNGLWEQENHLTLVPGYTGNIAKDVDAYLLQLH", "length": 304 }, "evidence": [ { "id": "F1SCL5", "url": "https://omabrowser.org/oma/group/F1SCL5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9CWJ3-1", "protein_name": "KATNB1-like protein 1", "gene_name": "Katnbl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFDTHHVKKRNFSNSIDLPRKRISNFTSKNMKEVKRSPKQLAAYISRTVAQAVKSPEKLRKVLYHRKLVRRSFPNPCYKTKQSPKSGGCDMANKENELACAGHLPENLRHDSRTFVINTSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNLRLNVALTFWRKRSISELVAYLVRIEDLGVVVDCLPVLTNSLQEEKQYISLGCCVDLLPLVKSLLQSRFEEYVIVGLNWLQAVIKRWWSELSSTSEIISDGNIKILKQQLSGLWEQESHLTLVPGYTGNIAKDVDAYLLQLH", "length": 299 }, "evidence": [ { "id": "F1SCL5", "url": "https://omabrowser.org/oma/group/F1SCL5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H079-1", "protein_name": "KATNB1-like protein 1", "gene_name": "KATNBL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVKSPDKLRKVIYRRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRTYLVNSSDSGSSQTESPSSKYSGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISELVAYLLRIEDLGVVVDCLPVLTNCLQEEKQYISLGCCVDLLPLVKSLLKSKFEEYVIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQENHLTLVPGYTGNIAKDVDAYLLQLH", "length": 304 }, "evidence": [ { "id": "F1SCL5", "url": "https://omabrowser.org/oma/group/F1SCL5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "pmid": "" }, { "name": "mitotic spindle pole", "id": "GO:0097431", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097431", "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "positive regulation of cytoskeleton organization", "id": "GO:0051495", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051495", "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "pmid": "" }, { "name": "cytoplasmic microtubule organization", "id": "GO:0031122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031122", "evidence": [ { "database": "UniProtKB", "id": "F1SCL5", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 124, "end_pos": 126, "annotation": "n_glycosylation_sequon" }, { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SCL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCL5" }, { "id": "PF13925", "database": "Pfam", "url": 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"MRRLLLVTSLVAVLLLEAGSAPTPQALVKIKGKAGAEQDMEEAWSSGLVDPPGKDKQWEQLLQVASQEQQEGAKALAGNKDTLDRVPSPKWGPEPDRDHLYHSWPQEAQEEARPWARALPPRQVLQGPEEDRDHIYHPRGDSWEP", "length": 145, "header": "tr|F1SAB9-1|F1SAB9_PIG Isoform 1 of Proline rich acidic protein 1 OS=Sus scrofa OX=9823 GN=PRAP1 PE=1 SV=3 CANONICAL=F1SAB9-1" }, "locus": { "chromosome": "14", "start_pos": 141329910, "end_pos": 141326184, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011808.4", "url": "https://www.ensembl.org/id/ENSSSCT00000011808.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011505.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011505.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 23, "start_aa": "Thr", "end_pos": 23, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr23", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QN50", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN50" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154502", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154502", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BA00-1", "protein_name": "Proline rich acidic protein 1", "gene_name": "PRAP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRRLLLLTSLVAVLLLEAGSARIPQVRVQTKGKVGAEQDTEVWDARAVESPEKDNQLIWLLMAPKLMTTSKEQKGAKAPAETEDALGHVLGPREGPEPDWDSLFHDGPEEVLEEARPWARVLPPRQVLHGPEEDRDHIYHPREP", "length": 144 }, "evidence": [ { "id": "F1SAB9", "url": "https://omabrowser.org/oma/group/F1SAB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q80XD8-1", "protein_name": "Proline-rich acidic protein 1", "gene_name": "Prap1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRFLLATCLVAALLWEAGAAPAHQVPVKTKGKHVFPEQETEKVWDTRALEPLEKDNQLGPLLPEPKQKPAAAEEKRPDAMTWVETEDILSHLRSPLQGPELDLDSIDHPMSDDVQDEEVPQSRPILYRQVLQGPEEDLDHLAHSMEDS", "length": 149 }, "evidence": [ { "id": "F1SAB9", "url": "https://omabrowser.org/oma/group/F1SAB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96NZ9-1", "protein_name": "Proline-rich acidic protein 1", "gene_name": "PRAP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRRLLLVTSLVVVLLWEAGAVPAPKVPIKMQVKHWPSEQDPEKAWGARVVEPPEKDDQLVVLFPVQKPKLLTTEEKPRGQGRGPILPGTKAWMETEDTLGHVLSPEPDHDSLYHPPPEEDQGEERPRLWVMPNHQVLLGPEEDQDHIYHPQ", "length": 151 }, "evidence": [ { "id": "F1SAB9", "url": "https://omabrowser.org/oma/group/F1SAB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9ES75-1", "protein_name": "Proline-rich acidic protein 1", "gene_name": "Prap1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKRFLLATCLVAVLLWEAGAIPAHQVPVKTKGKHVFPEQETEKAWGTRAMEPLEKDDQLRALLPVPKQKLAATEEKHSDTMTWVETKDILSRFRNPLQGPELDLDSIYHPMSEDVQNEEVPQSRPILYRQVLHGPEEDLDHISHSLEDSGEP", "length": 152 }, "evidence": [ { "id": "F1SAB9", "url": "https://omabrowser.org/oma/group/F1SAB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SAB9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 145, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SAB9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SAB9" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], 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of Family with sequence similarity 186 member B OS=Sus scrofa OX=9823 GN=FAM186B PE=4 SV=4 CANONICAL=F1SHB0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQ07-1", "url": "https://www.uniprot.org/uniprotkb/F1SHB0/entry#A0A5G2QQ07-1", "sequence": { "sequence": "MEKKPPQLVTPASVKAIISRIEAAQLTRTQEDISSQLSDILDNVNCVINRFQEELGYDFQKKAKSHQTEQKGRNRLILLEKITSFSKDAETKEKHLYEILRWLGDWGDSLTYEIKNRKSEEEEEALDEWIEVMEKVLPLSLIATKGGIESLISLCSTLIEGQKKGSQMSKCTFWQGWQALSPQKAKSCPQPLSPEQMLQDRHTTCTKVSESLKERNARNPQRSQLSLFVKSQTSPSLEPE", "length": 240, "header": "tr|A0A5G2QQ07-1|F1SHB0_PIG Computationally mapped isoform of Family with sequence similarity 186 member B OS=Sus scrofa OX=9823 GN=FAM186B PE=4 SV=1 CANONICAL=F1SHB0-1" }, "locus": { "chromosome": "5", "start_pos": 15559720, "end_pos": 15543029, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066441.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066441.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060372.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060372.1" } ] } }, { "isoform_ac": "F1SHB0-1", "url": "https://www.uniprot.org/uniprotkb/F1SHB0/entry#F1SHB0-1", "sequence": { "sequence": "MEKKPPQLVTPASVKAIISRIEAAQLTRTQEDISSQLSDILDNVNCVINRFQEELGYDFQKKAKSHQTEQKGRNRLILLEKITSFSKDAETKEKHLYEILRWLGDWGDSLTYEIKNRKSEEEEEALDEWIEVMEKVLPLSLIATKGGIESLISLCSTLIEGQKKGSQMSKCTFWQGWQALSPQKAKSCPQPLSPEQMLQDRHTTCTKVSEVKSMLQELLDSTMFNEGEVRAIRYMSAVIENLSKALMLQHKENRSLETKYRYLKIEMTKELSSQRLFFQKSLQVLESKRDALLKQVEILGGRYHDLLLIKHALDFQLKKAQSARGEAADSGKILADSLVPAKRETPPKKETVPEETQQKPKKEEQFSPLSPSPTATAWGSGASPSTDQLLSTMTVYSRVADVYSSKNTESLQPGLLSSTECKSPKKWERPAAESPGHNVKDQKDFFQEAAPEKEGLQIQPHFQKQLSPESARKMASEGMAEHWEEELSWERRRQQWLKEEEMWLQRQERWTLLEQEHQAKLRQWEVEEVARQLQERGRPWRELERPEEDAEKRIFMPTRRWRDLEEASLAPPPSRAQSAPQGRRPHLPRSAKTQQPLPGTQRTMSSAKFTQKPRACQVPLKPKKSASFPVTVTSLQKATRPPWPVSPAALKGKVYHLGVEAQRRNLQLLTEEGPLGLPPDLRSKALELTTTTMELNALRLWCLCHKYVLHRRFQSLRQAVINHLQDMQETKAAYKAQNLYLFLENIDHLQNVQLQAWTNKQKDLEEKRQECLSSMVTTFPKLQLEWSINLHTPVVTSAKSKKSKPPQSLLRHMRFSSSSCKPWELFTTKHLQCVPLHMARQQDNQMEAIWKTDVASSSHPVERKTPIHLSWDQLGGYPDTPRLLALDVHSSYCKSLMSLKARAPVTQRKECPQPPEESAELVRKKSNKSFPGVGLDF", "length": 937, "header": "tr|F1SHB0-1|F1SHB0_PIG Isoform 1 of Family with sequence similarity 186 member B OS=Sus scrofa OX=9823 GN=FAM186B PE=4 SV=4 CANONICAL=F1SHB0-1" }, "locus": { "chromosome": "5", "start_pos": 15559720, "end_pos": 15542235, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000218.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000218.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000216.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000216.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQ07", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ07" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "F1SHB0", "url": "https://www.uniprot.org/uniprotkb/F1SHB0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 241, "end_pos": 243, "annotation": "n_glycosylation_sequon" }, { "start_pos": 253, "end_pos": 255, "annotation": "n_glycosylation_sequon" }, { "start_pos": 927, "end_pos": 929, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SHB0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 937, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SHB0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SHB0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SHB0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHB0" }, { "id": "PF20865", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20865" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FAM186A/B C-terminal", "eco_id": "ECO_0000259", "start_pos": 653, "end_pos": 887, "start_aa": "Lys", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SHB0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHB0" }, { "id": "PF20870", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20870" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FAM186A/B N-terminal", "eco_id": "ECO_0000259", "start_pos": 6, "end_pos": 254, "start_aa": "Pro", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 241, "end_pos": 243 }, { "start_pos": 253, "end_pos": 255 }, { "start_pos": 927, "end_pos": 929 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 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"uniprot_canonical_ac": "F1SGG5-1", "uniprot_ac": "F1SGG5", "uniprot_id": "F1SGG5_PIG", "mass": { "chemical_mass": 56552.0, "monoisotopic_mass": 56552.0 }, "refseq": {}, "gene_names": [ { "name": "KRT72", "type": "recommended", "evidence": [ { "id": "F1SGG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" } ] } ], "protein_names": [ { "name": "Keratin 72", "type": "synonym", "evidence": [ { "id": "F1SGG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGG5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SGG5", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KRT72", "url": "https://www.uniprot.org/uniprotkb/F1SGG5", "locus": { "chromosome": "5", "start_pos": 17936800, "end_pos": 17948937, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000249", "url": "https://www.ensembl.org/id/ENSSSCG00000000249" } ] } } ], "crossref": [ { "id": "F1SGG5", "url": "https://alphafold.ebi.ac.uk/entry/F1SGG5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000249", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000249", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR003054", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003054", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018039", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018039", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032444", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032444", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45616", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45616", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45616:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45616:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00038", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00038", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16208", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16208", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6805567", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6809371", "url": 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"MSRQLHLYSGGERLAFSGCSAVISGRVSSCCTSFRAGVKGKATFGSRSLFNPGASRRLALSTASRRGGGRLGGFVGTVFGSAGLGLACPSVCPPSGIPQVTVNKSLLAPLNVELDPEFQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNTYKNNLEPILEGYISTLQKQMETLSGDRVRLDSELRSVRDVVEDYKKRYEVEINRRTAAENEFVELKKDVDTAYMNKVELQAKVDSLTDEIKFFKYLYEGEIAQIQSHISDTSVILSMDNNRDLDLDSIIAEVRAQYEDISLKSKAEAEALYQSKIQELQVTAGQHGDDLKLTKAEISDLNRLIQRICAEIGSVKKQCSNLETAITDAEQRGDCTLKDAQAKLDELEGALYQAKEELARMLREYQELMSTKLALDVEIATYRKLLEGEECRMYGDYPNSMSISVISNTIARAGGAGFSVGFGASSTYSYKPSAVDVKTKGSCGSEFKDLPAKTSGSRRATKKALR", "length": 511, "header": "tr|F1SGG5-1|F1SGG5_PIG Isoform 1 of Keratin 72 OS=Sus scrofa OX=9823 GN=KRT72 PE=3 SV=4 CANONICAL=F1SGG5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQK2-1", "url": "https://www.uniprot.org/uniprotkb/F1SGG5/entry#A0A5G2QQK2-1", "sequence": { "sequence": "MSRQLHLYSGGERLAFSGCSAVISGRVSSCCTSFRAGVKGKATFGSRSLFNPGASRRLALSTASRRGGGRLGGFVGTVFGSAGLGLACPSVCPPSGIPQVTVNKSLLAPLNVELDPEFQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNTYKNNLEPILEGYISTLQKQMETLSGDRVRLDSELRSVRDVVEDYKKRYEVEINRRTAAENEFVELKKDVDTAYMNKVELQAKVDSLTDEIKFFKYLYEGEIAQIQSHISDTSVILSMDNNRDLDLDSIIAEVRAQYEDISLKSKAEAEALYQSKCSNLETAITDAEQRGDCTLKDAQAKLDELEGALYQAKEELARMLREYQELMSTKLALDVEIATYRKLLEGEECRMYGDYPNSMSISVISNTIARAGGAGFSVGFGASSTYSYKPSAVDVKTKGSCGSEFKDLPAKTSGSRRATKKALR", "length": 469, "header": "tr|A0A5G2QQK2-1|F1SGG5_PIG Computationally mapped isoform of Keratin 72 OS=Sus scrofa OX=9823 GN=KRT72 PE=3 SV=2 CANONICAL=F1SGG5-1" }, "locus": { "chromosome": "5", "start_pos": 17948937, "end_pos": 17936810, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091033.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091033.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067017.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067017.2" } ] } }, { "isoform_ac": "F1SGG5-1", "url": "https://www.uniprot.org/uniprotkb/F1SGG5/entry#F1SGG5-1", "sequence": { "sequence": "MSRQLHLYSGGERLAFSGCSAVISGRVSSCCTSFRAGVKGKATFGSRSLFNPGASRRLALSTASRRGGGRLGGFVGTVFGSAGLGLACPSVCPPSGIPQVTVNKSLLAPLNVELDPEFQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNTYKNNLEPILEGYISTLQKQMETLSGDRVRLDSELRSVRDVVEDYKKRYEVEINRRTAAENEFVELKKDVDTAYMNKVELQAKVDSLTDEIKFFKYLYEGEIAQIQSHISDTSVILSMDNNRDLDLDSIIAEVRAQYEDISLKSKAEAEALYQSKIQELQVTAGQHGDDLKLTKAEISDLNRLIQRICAEIGSVKKQCSNLETAITDAEQRGDCTLKDAQAKLDELEGALYQAKEELARMLREYQELMSTKLALDVEIATYRKLLEGEECRMYGDYPNSMSISVISNTIARAGGAGFSVGFGASSTYSYKPSAVDVKTKGSCGSEFKDLPAKTSGSRRATKKALR", "length": 511, "header": "tr|F1SGG5-1|F1SGG5_PIG Isoform 1 of Keratin 72 OS=Sus scrofa OX=9823 GN=KRT72 PE=3 SV=4 CANONICAL=F1SGG5-1" }, "locus": { "chromosome": "5", "start_pos": 17948937, "end_pos": 17936810, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000268.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000268.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000264.5", "url": "https://www.ensembl.org/id/ENSSSCP00000000264.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQK2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQK2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6805567", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6805567", "resource": "Reactome", "description": "Keratinization" }, { "id": "R-SSC-6809371", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6809371", "resource": "Reactome", "description": "Formation of the cornified envelope" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "keratin filament", "id": "GO:0045095", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045095", "evidence": [ { "database": "UniProtKB", "id": "F1SGG5", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SGG5", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "keratinization", "id": "GO:0031424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031424", "evidence": [ { "database": "UniProtKB", "id": "F1SGG5", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" } ], "pmid": "" }, { "name": "intermediate filament organization", "id": "GO:0045109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045109", "evidence": [ { "database": "UniProtKB", "id": "F1SGG5", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of skin epidermis", "id": "GO:0030280", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030280", "evidence": [ { "database": "UniProtKB", "id": "F1SGG5", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SGG5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 511, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SGG5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SGG5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SGG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGG5" }, { "id": "PS51842", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51842" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "IF rod", "eco_id": "ECO_0000259", "start_pos": 125, "end_pos": 438, "start_aa": "Glu", "end_aa": "Met", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SD76-1", "uniprot_ac": "F1SD76", "uniprot_id": "F1SD76_PIG", "mass": { "chemical_mass": 123147.0, "monoisotopic_mass": 123147.0 }, "refseq": { "ac": "XP_005661304", "name": "zinc finger SWIM domain-containing protein 4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661304" }, "gene_names": [ { "name": "ZSWIM4", "type": "recommended", "evidence": [ { "id": "F1SD76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD76" } ] }, { "name": "ZSWIM4", "type": "synonym", "evidence": [ { "id": 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"chromosome": "2", "start_pos": 65311158, "end_pos": 65335531, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013758", "url": "https://www.ensembl.org/id/ENSSSCG00000013758" } ] } } ], "crossref": [ { "id": "F1SD76", "url": "https://alphafold.ebi.ac.uk/entry/F1SD76", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013758", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013758", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100510892", "url": "https://www.ncbi.nlm.nih.gov/gene/100510892", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048370", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048370", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100510892", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510892", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ILMTQQF", "url": "https://omabrowser.org/oma/group/ILMTQQF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SD76", "url": "https://www.orthodb.org/?gene=F1SD76", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22619", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22619", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22619:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22619:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21055", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21055", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005661304", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661304", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QQK8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQK8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQK8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQK8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD76", "url": "https://www.uniprot.org/uniprotkb/F1SD76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD76-1", "url": "https://www.uniprot.org/uniprotkb/F1SD76-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPPAAKRSRGCPAGPEERNAGVATVRGRGRPEALLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFWSFPRSEREICMYSSLGYQPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNIRELGGPGEPERLYHVSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHARQVELRLPISETLSQMNRDQLQKFVQYLISAHHTEVLPTAQRLADEILLLGSEINLVHGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLSNDGYYGASQQLRSMFCKVREMLRMRDSNGARMLILMTEQFLQDPRLALWRQQGAGMTDKCRQLWDELGALWVCVVLSPHCKPEERTSWLQLLGKWDKLDVCPLEEGNYSFDGPSLQPTSALSPGPEEEEEVVATGSRHTVFGRALQAGSLHWSDAHLQRILAGDSYSPSLTGNMGSDKPAFDPQGRPLWLGEPFPTACARVDTLRAHGYPRQALRLAGAIVNTLRLQRRHQLESYKQQKKELLQKGSTCITNMEGWVGHPLDPIGCLCRALLEASRLEEETLALYPDSGPEKRKVAYQHVPVPGSPGESYLAMALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQVLRKQAGQLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLSLRAMRLPVLETAFPAGETHGNPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDPKWLHAVLGSIQQNIHSPALLFKLAQDACKTATPASAPPDTTLLGIALELGLQVMRMTLNTMTWRRREMVRWLVSCATEIGPQALMNIMQNWYSLFTPVEAATIVAVTGTTHATLLRLQLDASRREELWACARTLALQCAMKDPQNCALPALTLCEKNHAAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIHCAPMLSDILRRWTLSAPSLGPLGARRAAKPLGADRAPLCQLLDAAVAAYITTSHSRLTHISPRHYGDFIEFLGKARETFLLAPDGHLQFAQFLENLKQTYKGKKKLMLLVRERFG", "length": 1106, "header": "tr|F1SD76-1|F1SD76_PIG Isoform 1 of Zinc finger SWIM-type containing 4 OS=Sus scrofa OX=9823 GN=ZSWIM4 PE=4 SV=3 CANONICAL=F1SD76-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQK8-1", "url": "https://www.uniprot.org/uniprotkb/F1SD76/entry#A0A5G2QQK8-1", "sequence": { "sequence": "MDPPAAKRSRGCPAGPEERNAGVATVRGRGRPEALLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFWSFPRSEREICMYSSLGYQPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNIRELGGPGEPERLYHVSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHARQVELRLPISETLSQMNRDQLQKFVQYLISAHHTEVLPTAQRLADEILLLGSEINLVHGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLSNDGYYGASQQLRSMFCKVREMLRMRDSNGARMLILMTEQFLQDPRLALWRQQGAGMTDKCRQLWDELGALWVCVVLSPHCKPEERTSWLQLLGKWDKLDVCPLEEGNYSFDGPSLQPTSALSPELLQKGSTCITNMEGWVGHPLDPIGCLCRALLEASRLEEETLALYPDSGPEKRKVAYQHVPVPGSPGESYLAMALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQVLRKQAGQLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLSLRAMRLPVLETAFPAGETHGNPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDPKWLHAVLGSIQQNIHSPALLFKLAQDACKTATPASAPPDTTLLGIALELGLQVMRMTLNTMTWRRREMVRWLVSCATEIGPQALMNIMQNWYSLFTPVEAATIVAVTGTTHATLLRLQLDASRREELWACARTLALQCAMKDPQNCALPALTLCEKNHAAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIHCAPMLSDILRRWTLSAPSLGPLGARRAAKPLGADRAPLCQLLDAAVAAYITTSHSRLTHISPRHYGDFIEFLGKARETFLLAPDGHLQFAQFLENLKQTYKGKKKLMLLVRERFG", "length": 989, "header": "tr|A0A5G2QQK8-1|F1SD76_PIG Computationally mapped isoform of Zinc finger SWIM-type containing 4 OS=Sus scrofa OX=9823 GN=ZSWIM4 PE=4 SV=1 CANONICAL=F1SD76-1" }, "locus": { "chromosome": "2", "start_pos": 65335331, "end_pos": 65312333, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067360.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067360.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064355.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064355.1" } ] } }, { "isoform_ac": "F1SD76-1", "url": "https://www.uniprot.org/uniprotkb/F1SD76/entry#F1SD76-1", "sequence": { "sequence": "MDPPAAKRSRGCPAGPEERNAGVATVRGRGRPEALLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFWSFPRSEREICMYSSLGYQPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNIRELGGPGEPERLYHVSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHARQVELRLPISETLSQMNRDQLQKFVQYLISAHHTEVLPTAQRLADEILLLGSEINLVHGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLSNDGYYGASQQLRSMFCKVREMLRMRDSNGARMLILMTEQFLQDPRLALWRQQGAGMTDKCRQLWDELGALWVCVVLSPHCKPEERTSWLQLLGKWDKLDVCPLEEGNYSFDGPSLQPTSALSPGPEEEEEVVATGSRHTVFGRALQAGSLHWSDAHLQRILAGDSYSPSLTGNMGSDKPAFDPQGRPLWLGEPFPTACARVDTLRAHGYPRQALRLAGAIVNTLRLQRRHQLESYKQQKKELLQKGSTCITNMEGWVGHPLDPIGCLCRALLEASRLEEETLALYPDSGPEKRKVAYQHVPVPGSPGESYLAMALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQVLRKQAGQLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLSLRAMRLPVLETAFPAGETHGNPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDPKWLHAVLGSIQQNIHSPALLFKLAQDACKTATPASAPPDTTLLGIALELGLQVMRMTLNTMTWRRREMVRWLVSCATEIGPQALMNIMQNWYSLFTPVEAATIVAVTGTTHATLLRLQLDASRREELWACARTLALQCAMKDPQNCALPALTLCEKNHAAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIHCAPMLSDILRRWTLSAPSLGPLGARRAAKPLGADRAPLCQLLDAAVAAYITTSHSRLTHISPRHYGDFIEFLGKARETFLLAPDGHLQFAQFLENLKQTYKGKKKLMLLVRERFG", "length": 1106, "header": "tr|F1SD76-1|F1SD76_PIG Isoform 1 of Zinc finger SWIM-type containing 4 OS=Sus scrofa OX=9823 GN=ZSWIM4 PE=4 SV=3 CANONICAL=F1SD76-1" }, "locus": { "chromosome": "2", "start_pos": 65335331, "end_pos": 65312333, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015032.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015032.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014627.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014627.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 243, "start_aa": "Thr", "end_pos": 243, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr243", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQK8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQK8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100510892", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510892", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9SZZ8-1", "protein_name": "Zinc finger SWIM-type containing 4", "gene_name": "ZSWIM4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDPPAAKRSRGCPAGPEERNAGAGAVRGRGRPEALLDLSAKRVAENWAFEQVEERFSRVPEPVQKRIVFWSFPRSEREICMYSSLGYQPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNVREPGGPGEPERLYHVSISFDRCKITSVTCGCDNRDLFYCAHVVALSLHRIRHAHQVELRLPISETLSQMNRDQLQKFVQYLISAHHTEVLPTAQRLADEILLLGSEINLVHGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLSNGGYYGASQQLRSMFCKVREMLRMRDSNGARMLILMTEQFLQDPRLALWRQQGAGMTDKCRQLWDELGALWVCVILSPHCRPEERTSWLQLLSKWDKLDVCPLEEGNYSFDGPSLQPTAALIPELLQKGSTCITNMEGWVGHPLDPIGCLCRALLEACRLEEETLAIYPDSGPEKRKVAYQHVPVPGSPGESYLAMALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQVLRKQAGQLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLALRAMRLPVLETAFPAGEPPSNPLDSIMSNRFPRWFILGHLETRQCELASAMLTAAKGDPKWLHAVLGSIQQNIHSPALLFKLAQDACKTATPASAPPDTTLLGIALELGLQVMRMTLNTMTWRRREMVRWLVSCATEIGPQALMNIMQNWYSLFTPVEAATIVAVTGTTHATLLRLQLDAARREELWACARTLALQCAMKDPQNCALPALTLCEKNQAAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIHCAPMLSDILRRWTLSAPGLGPLGARRAAKPLGADRAPLCQLLDAAVAAYITTSHSRLTHISPRHYSDFIEFLGKARETFLLAPDGHLQFAQFLENLKQTYKGKKKLMLLVRERFG", "length": 989 }, "evidence": [ { "id": "F1SD76", "url": "https://omabrowser.org/oma/group/F1SD76/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8C7B8-1", "protein_name": "Zinc finger SWIM domain-containing protein 4", "gene_name": "Zswim4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPPAAKRSRGCPAGDEPGTGARRSRPEPLLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFWSFPRSEREICMYSSLGYQPPEGEQDTRVPFTRGLHLLQSGAVDRVLQVGFHLSGNIREVGGPGEPEHLYHVSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHARQVELRLPISETLSQMNRDQLQKFVQYLISAHHTEVLPTAQRLADEILLLGSEINLVHGAPDPTAGAGTEDANCWHLDEEQIQEQVKQLLSNGGHYGASQQLRSMFSKVREMLRARDSNGARMLILMTEQFLQDPRLALWRQQGAGMTDKCRQLWDELGALWVCVILSPHCKPDERSGWLQLLGTWDKLDVCPLEEGNYSLDIPSLQPALTSRTGSEDEEEVTAASPRRTVFSRALQAGELHWNDSHLQRILASDSCGPTLTGSMGSDKPTFDPQGHPIWLGEPFPTACARVDTLRAHGYPHKALRLACAIINTLRLQRRHQLESYKQQKKELLQKGATGVTSTEGWVGHPLDPIGCLCRALLEACRLEEEPHSLFPDSAPEKRKLAYQHVLVPGSPGESYLALALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQVLRKQAGLLLEGGPFSGFGEVIFRESVPMHTCARYLFTALLPHDPDLAFRLALRAMRLPVLETTFPAGESHPNPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDTKWLHAVLGSVQQNIHSPALLFKLAQDACKTATPASAPPDTVLLGIALELGLQVMRMTLNTMTWRRREMVRWLVSCATEIGPPALMSIMKNWYSLFTPVEAVTIVAVTGTTHATLLRLQLDTAGREELWACARTLALQCAMKDPQNCALPALTLCEKNHAAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIHCAPMLSDILRRWTLSAPGLGPLGARRATKPLGTDRAPLCQLLDAAVAAYITTSHSRLTHISPRHYGDFIEFLGKARETFLLAPDGHLQFAQFLENLKQTYKGKKKLMLLVRERFG", "length": 1101 }, "evidence": [ { "id": "F1SD76", "url": "https://omabrowser.org/oma/group/F1SD76/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H7M6-1", "protein_name": "Zinc finger SWIM domain-containing protein 4", "gene_name": "ZSWIM4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPPAAKRSRGCPAGPEERDAGAGAARGRGRPEALLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFWSFPRSEREICMYSSLGYPPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNIREPGSPGEPERLYHVSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHAHQVELRLPISETLSQMNRDQLQKFVQYLISAHHTEVLPTAQRLADEILLLGSEINLVNGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLSNGGYYGASQQLRSMFSKVREMLRMRDSNGARMLILMTEQFLQDTRLALWRQQGAGMTDKCRQLWDELGALWVCVVLSPHCKPEERAGWLQLLSRWDKLDVCPLEEGNYSFDGPSLQPTMAPAPELLQKGSTCITNTEGWVGHPLDPIGCLCRALLEACRLEEETLTLYPDSGPEKRKVAYQHVPVPGSPGESYLVLALEVALLGLGQQRALPEGLYAQDKVVRNEEQLLALLEEVELDERLVQVLRKQAGLLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDLAYRLALRAMRLPILETAFPAGEPHPSPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDPKWLHTVLGSIQQNIHSPALLFKLAQDACKTATPVSAPPDTTLLGIALELGLQVMRMTLNVMTWRRREMVRWLVSCATEIGPQALMNIMQNWYSLFTPVEAATIVAVTGTTHATLLRLQLDTSRREELWACARTLALQCAMKDPQNCALPALTLCEKNHSAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDSHPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIHCAPMLSDILRRWTLSAPGLGPLGARRAAKPLGADRAPLCQLLDAAVTAYITTSHSRLTHISPRHYGDFIEFLGKARETFLLAPDGHLQFSQFLENLKQTYKGKKKLMLLVRERFG", "length": 989 }, "evidence": [ { "id": "F1SD76", "url": "https://omabrowser.org/oma/group/F1SD76/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SD76", "url": "https://www.uniprot.org/uniprotkb/F1SD76" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Cul2-RING ubiquitin ligase complex", "id": "GO:0031462", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031462", "evidence": [ { "database": "UniProtKB", "id": "F1SD76", "url": "https://www.uniprot.org/uniprotkb/F1SD76" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 377, "end_pos": 379, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SD76-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1106, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SD76-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SD76" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SD76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD76" }, { "id": "PS50966", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50966" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SWIM-type", "eco_id": "ECO_0000259", "start_pos": 139, "end_pos": 176, "start_aa": "Tyr", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 243 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 377, "end_pos": 379 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] 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"https://www.genome.jp/dbget-bin/www_bget?ssc:100153801", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SQTICHS", "url": "https://omabrowser.org/oma/group/SQTICHS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AV01", "url": "https://www.orthodb.org/?gene=A0A287AV01", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12845", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12845", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12845:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12845:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00018", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00018", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00621", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00621", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22697", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22697", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-193648", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3928663", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928663", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-416482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8980692", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020930564", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930564", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AV01", "url": "https://www.uniprot.org/uniprotkb/A0A287AV01", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AV01-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AV01-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QRE1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRE1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QRE1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRE1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM48", "url": "https://www.uniprot.org/uniprotkb/F1SM48", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM48-1", "url": "https://www.uniprot.org/uniprotkb/F1SM48-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELLAAAFSAACAVDHDSSTSESDARDSAAGHLPGSESSSTPGNGATPEECPALADSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNADRSPASEEAPEEDEEEEEEELPSPPERKALPQICLLSNPHSRFNLWQDLPEIRSSGVLDILQPEEIRLQEAMFELVTSEASYYKSLSLLVSHFMENERLKKLLHPSEAHILFSNVLDVMGVSERFLLELERRMEENIVISDVCDIVYRYAANHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPLSSFLILPFQRITRLKLLVQNILKRVEESSEREATALDAHKELELVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKATSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILDKTEDGWIFGERLHDQERGWFPSNMAEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ", "length": 617, "header": "tr|F1SM48-1|F1SM48_PIG Isoform 1 of Neuronal guanine nucleotide exchange factor OS=Sus scrofa OX=9823 GN=NGEF PE=4 SV=3 CANONICAL=F1SM48-1" }, "isoforms": [ { "isoform_ac": "A0A287AV01-1", "url": "https://www.uniprot.org/uniprotkb/F1SM48/entry#A0A287AV01-1", "sequence": { "sequence": "MGPRKANTQAGSDCHGHGASAGPGGSEGRECFPGSLSQERTKPLAARSLQQREGFRTHWPAPRSPQHRRTGEQEPSGLPPPGTPQQQGRALKTRDIGEGLLISPSPSAKKIIGLLSMETRDSEDLGKPQKKLVSGSWQIDEPATVRPEVLSEERMPHVVQETQDNAPHYYIPIQRNSIFNRTVRHRSKSNTGGTPERNTTPPADSLENGKSVNETLTLNFPQSRSGPWRIPTQTHPRAKRTSESSSTPGNGATPEECPALADSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNADRSPASEEAPEEDEEEEEEELPSPPERKALPQICLLSNPHSRFNLWQDLPEIRSSGVLDILQPEEIRLQEAMFELVTSEASYYKSLSLLVSHFMENERLKKLLHPSEAHILFSNVLDVMGVSERFLLELERRMEENIVISDVCDIVYRYAANHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPLSSFLILPFQRITRLKLLVQNILKRVEESSEREATALDAHKELELVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKATSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILDKTEDGWIFGERLHDQERGWFPSNMAEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ", "length": 823, "header": "tr|A0A287AV01-1|A0A287AV01_PIG Computationally mapped isoform of Neuronal guanine nucleotide exchange factor OS=Sus scrofa OX=9823 GN=NGEF PE=4 SV=1 CANONICAL=F1SM48-1" }, "locus": { "chromosome": "15", "start_pos": 133459961, "end_pos": 133333466, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041201.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041201.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047695.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047695.1" } ] } }, { "isoform_ac": "A0A5G2QRE1-1", "url": "https://www.uniprot.org/uniprotkb/F1SM48/entry#A0A5G2QRE1-1", "sequence": { "sequence": "MKLGDTIPSTADGKTQAPGDLSCSPTQTGAQAWPLPGCPGRSLGCGWRRRGLLEPLGARGCLCFLAVPTRPQTTAAAAREVAGRVCSQSTRRGALVAAGRRRNKGDGTKASSASLTPRSEETKNHPHQDGVTSHLQRILSSRKEAMFELVTSEASYYKSLSLLVSHFMENERLKKLLHPSEAHILFSNVLDVMGVSERFLLELERRMEENIVISDVCDIVYRYAANHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPLSSFLILPFQRITRLKLLVQNILKRVEESSEREATALDAHKELELVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKATSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILDKTEDGWIFGERLHDQERGWFPSNMAEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ", "length": 578, "header": "tr|A0A5G2QRE1-1|F1SM48_PIG Computationally mapped isoform of Neuronal guanine nucleotide exchange factor OS=Sus scrofa OX=9823 GN=NGEF PE=4 SV=1 CANONICAL=F1SM48-1" }, "locus": { "chromosome": "15", "start_pos": 133353520, "end_pos": 133333466, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075024.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075024.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064611.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064611.1" } ] } }, { "isoform_ac": "F1SM48-1", "url": "https://www.uniprot.org/uniprotkb/F1SM48/entry#F1SM48-1", "sequence": { "sequence": "MELLAAAFSAACAVDHDSSTSESDARDSAAGHLPGSESSSTPGNGATPEECPALADSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNADRSPASEEAPEEDEEEEEEELPSPPERKALPQICLLSNPHSRFNLWQDLPEIRSSGVLDILQPEEIRLQEAMFELVTSEASYYKSLSLLVSHFMENERLKKLLHPSEAHILFSNVLDVMGVSERFLLELERRMEENIVISDVCDIVYRYAANHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPLSSFLILPFQRITRLKLLVQNILKRVEESSEREATALDAHKELELVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKATSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILDKTEDGWIFGERLHDQERGWFPSNMAEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ", "length": 617, "header": "tr|F1SM48-1|F1SM48_PIG Isoform 1 of Neuronal guanine nucleotide exchange factor OS=Sus scrofa OX=9823 GN=NGEF PE=4 SV=3 CANONICAL=F1SM48-1" }, "locus": { "chromosome": "15", "start_pos": 133377575, "end_pos": 133333466, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017744.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017744.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017263.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017263.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 41, "start_aa": "Thr", "end_pos": 41, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr41", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QRE1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QRE1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153801", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153801", "resource": "KEGG Pathway" }, { "id": "R-SSC-193648", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "resource": "Reactome", "description": "NRAGE signals death through JNK" }, { "id": "R-SSC-3928663", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3928663", "resource": "Reactome", "description": "EPHA-mediated growth cone collapse" }, { "id": "R-SSC-416482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "resource": "Reactome", "description": "G alpha (12/13) signalling events" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZQH2-1", "protein_name": "Neuronal guanine nucleotide exchange factor", "gene_name": "NGEF", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDGHGGEAAGGLQQGISRSLSVSEGEEESEGADSETYERDSHTHYIAIQRNSKYYRSMRLPNRSKRKTAREAIHAGRAAGSLKNNESVKEPLNVLPPMGSPAPVDSNQTTLELLIQRLLPSYPRYRGNLPGSPSPAPPPLPPELLGSRLPPSAMELLAAALSATCALDQDGSAGQPGRNPPAASEDSPNAAEAPPPAHPMTTDSWRNLIEHIGLLYQEYRDKSTRQEIETRRLQDSQTDPEESSPSEETPPETEPASTPESKAAPQINLLRNSNSRFNLWQDLPEIRSSGILSILQPDEIKLQEAMFELVTSEASYCKSLNLLVSHFMENERLKKILHQSEAHILFSNVLDVKAVSERFLLDLERRVEENIVISDVCDIVYQHTVDHFSVYITYVSNQTYQERTYKQLLQDKPAFREVITQLELDPMCRGLSFSSFLILPFQRITRLKLLVQNILKKVEEKSERETTALEAHKELETVVKACNEGVRKMSRTEQMISIQKKLEFKIKSVPIISHSRWLLKQGELQQMNGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQSLANVFILRLLENADDREASYMLKASSQSEMKRWMISLAPNRRTKFVSFTSRLSDCPQIQCVHPYVAQQPDELSLELADVLNILDKTDDGWIFGERLHDQERGWFPSSIGEEILNPKIRAQNLKECFRVHKSDDSQRRKLGSRNRQ", "length": 732 }, "evidence": [ { "id": "F1SM48", "url": "https://omabrowser.org/oma/group/F1SM48/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7FDB4-1", "protein_name": "Ephexin-1 isoform X1", "gene_name": "ngef", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMAMTALFRGKWGHNNKPQEVQTKPRTPVPQLPSEDDENEDETLRAPIRRNSRFYRSMRKKKSAGPSEQQESPSSSPKPTVDPASYNRLSPAAANRVPLSPRLQKSPPSRSGISLLSNGVQGGVRSRSPLASPGDWPRRLEMEELSERTTSACTMQDNDNHSTADPDNITFRLVRNGDSPQKMAVENSCHNLNIMKNVDVLYQEYRDTSKQQEIDQRRQRDGLPTAGSGVLAAPALQLQLRSSTNSLNLWQNLDAVKKSGLLQTLEPKEIILQEAMFELVTSEASYYKSLELLETHFLRNPLLVNTLSQSDMHFLFSNITDIMKASEKFLMDLEHRIEESILISDVCDIVHFHAVNHFQVFISYVINQVYQETNYRRILQENCAFRENMAILENQPKVKGLSFTSFLILPFQRITRLKLLVQNILKRVEENSEKERTAILAHQELEKIVKQCNEGARKMSRTEELISIEKTLEFKSKSVPVISHSRWLLKKGEVQQMSGPKSTRTMRSRKLYHPIYLFLFNNLLLITKRNSSGDKFQVLDSCSRSMLRTEDLEDQGQMLACVFVLKLLENQEDREVSYMLKTESVSDKLRWICALTPNRRTRFLSTSTHEPDSPQVQCIQSYSSQEPDELSVEMADVLHILECTDDGWILGERLHDGERGWFPNRVVERIMSAEVRAQNLKECQRIQQAQEGAQGTRAASRGRVAVRNSQYNASWTDL", "length": 718 }, "evidence": [ { "id": "F1SM48", "url": "https://omabrowser.org/oma/group/F1SM48/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5BKC9-1", "protein_name": "Ephexin-1", "gene_name": "Ngef", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKNSEDQGKPQRKSVSSLWKSKHGPAEMRPELPPETAKETQNEEPRCLIPIQRNSLFNRAMRHKHKARSMSERRANDQAGDLPETRKSVNEPLAFNLPQGRLPPWRTPAQRGPGAQEASESSSTPGNGTTPEECPALTDSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNSDGSQAGEDNAEEEEEEEEEPASPPERRALPQICLLSNPHSRFNLWQDLPEIQSSGVLDILQPEETKLQEAMFELVTSEASYYKSLNLLVSHFMENERLKKILHPSEAHILFSNVLDVMAVSERFLLELEHRMEENIVISDVCDIVYRYAADHFSVYITYVSNQTYQERTYKQLLQEKTAFRELIAQLELDPKCKGLPLSSFLILPFQRITRLKLLVQNILKRVEEGSEREGTALDAHKELEMVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILEKTEDGWIFGERLHDQERGWFPSSMTEEILNPKIRSQNLKECFRVHKMEDPQRSQNKDRRKLGSRNRQ", "length": 701 }, "evidence": [ { "id": "F1SM48", "url": "https://omabrowser.org/oma/group/F1SM48/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CHT1-1", "protein_name": "Ephexin-1", "gene_name": "Ngef", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METKNSEDWGKPQRKSESSSRKSNHGPAEMRPALPPENREAPETGEETQNEEPRRLIPIQRHSLFNRAVRHRHKARSTSERRASDQADLPKMGKSVNERSAFNLPQGRLSPWRTPAQRDTGAQEASESSSTPGNGTTPEECPALTDSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIQGNSDGSQVGEDAGEEEEEEEEGEEEELASPPERRALPQICLLSNPHSRFNLWQDLPEIQSSGVLDILQPEEIRLQEAMFELVTSEASYYKSLNLLVSHFMENERLKKILHPSEAHILFSNVLDVMAVSERFLLELEHRMEENIVISDVCDIVYRYAADHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCKGLPFSSFLILPFQRITRLKLLVQNILKRVEERSEREGTALDAHKELEMVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILEKTEDGWIFGERLHDQERGWFPSSMTEEILNPKIRSQNLKECFRVHKMEDPQRSQNKDRRKLGSRNRQ", "length": 710 }, "evidence": [ { "id": "F1SM48", "url": "https://omabrowser.org/oma/group/F1SM48/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N5V2-1", "protein_name": "Ephexin-1", "gene_name": "NGEF", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METRESEDLEKTRRKSASDQWNTDNEPAKVKPELLPEKEETSQADQDIQDKEPHCHIPIKRNSIFNRSIRRKSKAKARDNPERNASCLADSQDNGKSVNEPLTLNIPWSRMPPCRTAMQTDPGAQEMSESSSTPGNGATPEEWPALADSPTTLTEALRMIHPIPADSWRNLIEQIGLLYQEYRDKSTLQEIETRRQQDAEIEDNTNGSPASEDTPEEEEEEEEEEEPASPPERKTLPQICLLSNPHSRFNLWQDLPEIRSSGVLEILQPEEIKLQEAMFELVTSEASYYKSLNLLVSHFMENERIRKILHPSEAHILFSNVLDVLAVSERFLLELEHRMEENIVISDVCDIVYRYAADHFSVYITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPFSSFLILPFQRITRLKLLVQNILKRVEERSERECTALDAHKELEMVVKACNEGVRKMSRTEQMISIQKKMEFKIKSVPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFHEIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQTLANVFILRLLENADDREATYMLKASSQSEMKRWMTSLAPNRRTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILDKTDDGWIFGERLHDQERGWFPSSMTEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ", "length": 710 }, "evidence": [ { "id": "F1SM48", "url": "https://omabrowser.org/oma/group/F1SM48/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F1SM48", "url": "https://www.uniprot.org/uniprotkb/F1SM48" } ], "pmid": "" }, { "name": "ephrin receptor binding", "id": "GO:0046875", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046875", "evidence": [ { "database": "UniProtKB", "id": "F1SM48", "url": "https://www.uniprot.org/uniprotkb/F1SM48" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cell projection", "id": "GO:0042995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042995", "evidence": [ { "database": "UniProtKB", "id": "F1SM48", "url": "https://www.uniprot.org/uniprotkb/F1SM48" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "F1SM48", "url": "https://www.uniprot.org/uniprotkb/F1SM48" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "regulation of actin cytoskeleton organization", "id": "GO:0032956", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032956", "evidence": [ { "database": "UniProtKB", "id": "F1SM48", "url": "https://www.uniprot.org/uniprotkb/F1SM48" } ], "pmid": "" }, { "name": "ephrin receptor signaling pathway", "id": "GO:0048013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048013", "evidence": [ { "database": "UniProtKB", "id": "F1SM48", "url": "https://www.uniprot.org/uniprotkb/F1SM48" } ], "pmid": "" }, { "name": "negative regulation of dendritic spine morphogenesis", "id": "GO:0061002", "url": 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"MVSAPAQPPTEGAEGAAPGGGPPGPPPNTTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICAIIVVVIVIQDFLCRQGSHNLLSYPPEKWRTRMDNETPGPSFPSQKQFYKLAAGRGSSPQFPQHCLFVRVANTVI", "length": 181, "header": "tr|A0A8W4FNF7-1|A0A8W4FNF7_PIG Computationally mapped isoform of Vesicle associated membrane protein 1 OS=Sus scrofa OX=9823 GN=VAMP1 PE=1 SV=1 CANONICAL=F1SL42-1" }, "locus": { "chromosome": "5", "start_pos": 64186965, "end_pos": 64184356, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106729.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106729.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080884.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080884.1" } ] } }, { "isoform_ac": "F1SL42-1", "url": "https://www.uniprot.org/uniprotkb/F1SL42/entry#F1SL42-1", "sequence": { "sequence": "MSAPAQPPTEGAEGAAPGGGPPGPPPNTTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICAIIVVVIVSKYR", "length": 117, "header": "tr|F1SL42-1|F1SL42_PIG Isoform 1 of Vesicle associated membrane protein 1 OS=Sus scrofa OX=9823 GN=VAMP1 PE=1 SV=4 CANONICAL=F1SL42-1" }, "locus": { "chromosome": "5", "start_pos": 64185797, "end_pos": 64181980, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000765.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000765.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000749.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000749.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QT82", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QT82" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SL42", "url": "https://www.uniprot.org/uniprotkb/F1SL42" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "F1SL42", "url": 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"glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CC2D2B", "url": "https://www.uniprot.org/uniprotkb/F1SC44", "locus": { "chromosome": "14", "start_pos": 107506045, "end_pos": 107414080, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000046471", "url": "https://www.ensembl.org/id/ENSSSCG00000046471" } ] } } ], "crossref": [ { "id": "F1SC44", "url": "https://alphafold.ebi.ac.uk/entry/F1SC44", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010502", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010502", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "ENSSSCG00000046471", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000046471", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028928", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028928", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041510", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041510", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052434", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052434", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056288", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056288", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056290", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056290", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR20837", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20837", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20837:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20837:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15625", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15625", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17661", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17661", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24652", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24652", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24656", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24656", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QUP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUP7-1", "url": 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"MKKFQREDIFRKISKGADNIAVEENIDKHLQKEENQNIVETLRGKVREKLKSAKVNQGEKSSTRLLIDDKIYQWSQTEVSLDKGLSFFIQSDEEDSALDQSAEQTSVNGSYHKHSSLDDNLQNFVEGQDEDFMKEVIFPDLVEIKAADYEDDQEQIKRQQANIFVPSSSPVNTQLKLPKDVMPRILEEEGIYVQKKPRIYKKTCNKMENRLLKLEEGKCWFEESGEIMSLPSPIRQSWNFRLNINKEALNPALKTMYKKAVKSDLEISVRNKMEGQGEMYHLDLNIVGLQFSHHPLFNQEQVLCARLLQLYECFQDRQQQNLTQLLYEKLKALTDATKLANENLKISQLTRKSLQDYYWQISNTKQLYDLEKERDFSLLHSILRTWKQIKSLRQRQGFTSTPIKLQFQRMKMNKYDEQKQEELSKMSETEKITEGKAFKNGEKQESFSYLASEFAETDTERINPITLMPQLSFTADITNSSRCSLVLRNVDARGVPGISWLINAQKLFRWANEVRIDPNNPEYSDLMEFIMYIKHKGQDMPKYFRLEQLQDEFNFVSEEEMKKSKRFQLLQLRNAGHLDIFLPQPMPLYDREIPDLVFQMRRLIVKRIVKVSKFNLSDVVADYEEIVSASQLTHAVCKLLERRRKLKPKRKERKKVAAQTICDGDIKILVRILRAYNIPTRKTVVSSLPGHDYNFSNLSKIKDNIYINIFDEMIIEKHEISGTFQVNIPPVLLGYTWSKTTYVSPREDCNGQNLKECTFLNIFATIEPQISYTICNPELDKFSDHTDVLERAQIFKKNCKALFPKRRITTTVFNDEGIQILVTRYIKALNPPQQLLDLFLHDSNATLDLVARFVSLIPIVSDTLDENDDFEIWMTSERCISLAIGTKEEHAILLCNFLLYFGKKALVLLGTSVLEGHVAYVLTQETDKYLLWNPLTGQCHKQFDPFCPLQSVDCLFDGENVWFNIQQNNSPMAVYFDYSKESFWKQLLPKNYQGPKAQSIQVTGFPIQMPYTDVQSVIDTVYQTGIHSSEFPQTEFALAVYIHPYPNNILSVWVYLASLAQRQ", "length": 1063, "header": "tr|F1SC44-1|F1SC44_PIG Isoform 1 of Coiled-coil and C2 domain containing 2B OS=Sus scrofa OX=9823 GN=CC2D2B PE=4 SV=3 CANONICAL=F1SC44-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QUP7-1", "url": "https://www.uniprot.org/uniprotkb/F1SC44/entry#A0A5G2QUP7-1", "sequence": { "sequence": "MIIEKHEDYCSKSCSGHSYIRKNWLGSIVFPFSALLQQSEFSDHTDVLERAQIFKKNCKALFPKRRITTTVFNDEGIQILVTRYIKALNPPQQLLDLFLHDSNATLDLVARFVSLIPIVSDTLDENDDFEIWMTSERCISLAIGTKEEHAILLCNFLLYFGKKALVLLGTSVLEGHVAYVLTQETDKYLLWNPLTGQCHKQFDPFCPLQSVDCLFDGENVWFNIQQNNSPMAVYFDYSKESFWKQLLPKNYQGPKAQSIQPEAIIYSDSDKGMVEDLKNRIERTLKCKIMEWRPKQPTRWNRQCTFILRKILPKLELGSGSFVSSEEESEFERLLQFYWVTGFPIQMPYTDVQSVIDTVYQTGIHSSEFPQTEFALAVYIHPYPNNILSVWVYLASLAQRQ", "length": 401, "header": "tr|A0A5G2QUP7-1|F1SC44_PIG Computationally mapped isoform of Coiled-coil and C2 domain containing 2B OS=Sus scrofa OX=9823 GN=CC2D2B PE=4 SV=2 CANONICAL=F1SC44-1" }, "locus": { "chromosome": "14", "start_pos": 107504342, "end_pos": 107478892, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082001.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082001.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067874.2", "url": "https://www.ensembl.org/id/ENSSSCP00000067874.2" } ] } }, { "isoform_ac": "A0A5G2R5V3-1", "url": "https://www.uniprot.org/uniprotkb/F1SC44/entry#A0A5G2R5V3-1", "sequence": { "sequence": "MKKFQREDIFRKISKGADNIAVEENIDKHLQKDSNIEENQNIVETLRGKVREKLKSAKVNQGEKSSTRLLIDDKIYQWSQFNPQTEVSLDKGLSFFIQSDEEDSALDQSAEQTSVNGSYHKHSSLDDNLQNFVEGQDEDFMKEVIFPDLVEIKAADYEDDQEQIKRQQANIFVPSSSPVNTQLKLPKDVMPRILEEEGIYVQKKPRIYKKTCNKMENRLLKLEEGKCWFEESGEIMSLPSPIRQSWNFRLNINKEALNPALKTMYKKAVKSDLEISVRNKMEGQGEMYHLDLNIVGLQFSHHPLFNQEQVLCARLLQLYECFQDRQQQNLTQLLYEKLKALTDATKLANENLKISQLTRKSLQDYYWQISNTKQLYDLEKERDFSLLHSILRTWKQIKSLRQRQGFTSTPIKLQFQRMKMNKYDEQKQEELSKMSETEKITEGKAFKNGEKQESFSYLASEFAETDTERINPITLMPQLSFTADITNSSRCSLHEQKRRAKIQKLKYFIKILYNDKQVSCTSVSPLQFDFKVMFQQIFSIQLIYWPETLCLEVYEISKRTSLLAKLYLPLPNNTELKSKTVLEYVEFSSDALVIPAYGEVGSNVPFLLEGNGTEELCLLTSGKLSYSLSWALDENGVPLTPVSQSLRSAYCSVLRNVDARGVPGISWLINAQKLFRWANEVRIDPNNPEYSDLMEFIMYIKHKGQDMPKYFRLEQLQDEFNFVSEEEMKKSKRFQLLQLRNAGHLDIFLPQPMPLYDREIPDLVFQESESEIEKDISMSDVNSITTQRISSANFLKKMRRLIVKRIVKVSKFNLSDVVADYEEIVSASQLTHAVCKLLERRRKLKPKRKERKKVAAQTICDGDIKILVRILRAYNIPTRKTVVSRTLKMPTYLVSSMPRIRHKETIKSVASDEILNEDAVRPFVEVSFQHTVYQTSVASGSHPCWNEEITVDFILPGHDYNFSNLSKIKDNIYINIFDEMIIEKHEDYCSKSCSGHSYIRKNWLGSIVFPFSALLQQSEISGTFQVNIPPVLLGYTWSKTTYVSPREDCNGQNLKECTFLNIFATIEPQISYTICNPELDKFSDHTDVLERAQIFKKNCKALFPKRRITTTVFNDEGIQILVTRYIKALNPPQQLLDLFLHDSNATLDLVARFVSLIPIVSDTLDENDDFEIWMTSERCISLAIGTKEEHAILLCNFLLYFGKKALVLLGTSVLEGHVAYVLTQETDKYLLWNPLTGQCHKQFDPFCPLQSVDCLFDGENVWFNIQQNNSPMAVYFDYSKESFWKQLLPKNYQGPKAQSIQPEAIIYSDSDKGMVEDLKNRIERTLKCKIMEWRPKQPTRWNRQCTFILRKILPKLELGSGSFVSSEEESEFERLLQFYWVTGFPIQMPYTDVQSVIDTVYQTGIHSSEFPQTEFALAVYIHPYPNNILSVWVYLASLAQRQ", "length": 1442, "header": "tr|A0A5G2R5V3-1|A0A5G2R5V3_PIG Computationally mapped isoform of Coiled-coil and C2 domain containing 2B OS=Sus scrofa OX=9823 GN=CC2D2B PE=4 SV=1 CANONICAL=F1SC44-1" }, "locus": { "chromosome": "14", "start_pos": 107504342, "end_pos": 107414080, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084535.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084535.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071710.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071710.1" } ] } }, { "isoform_ac": "F1SC44-1", "url": "https://www.uniprot.org/uniprotkb/F1SC44/entry#F1SC44-1", "sequence": { "sequence": "MKKFQREDIFRKISKGADNIAVEENIDKHLQKEENQNIVETLRGKVREKLKSAKVNQGEKSSTRLLIDDKIYQWSQTEVSLDKGLSFFIQSDEEDSALDQSAEQTSVNGSYHKHSSLDDNLQNFVEGQDEDFMKEVIFPDLVEIKAADYEDDQEQIKRQQANIFVPSSSPVNTQLKLPKDVMPRILEEEGIYVQKKPRIYKKTCNKMENRLLKLEEGKCWFEESGEIMSLPSPIRQSWNFRLNINKEALNPALKTMYKKAVKSDLEISVRNKMEGQGEMYHLDLNIVGLQFSHHPLFNQEQVLCARLLQLYECFQDRQQQNLTQLLYEKLKALTDATKLANENLKISQLTRKSLQDYYWQISNTKQLYDLEKERDFSLLHSILRTWKQIKSLRQRQGFTSTPIKLQFQRMKMNKYDEQKQEELSKMSETEKITEGKAFKNGEKQESFSYLASEFAETDTERINPITLMPQLSFTADITNSSRCSLVLRNVDARGVPGISWLINAQKLFRWANEVRIDPNNPEYSDLMEFIMYIKHKGQDMPKYFRLEQLQDEFNFVSEEEMKKSKRFQLLQLRNAGHLDIFLPQPMPLYDREIPDLVFQMRRLIVKRIVKVSKFNLSDVVADYEEIVSASQLTHAVCKLLERRRKLKPKRKERKKVAAQTICDGDIKILVRILRAYNIPTRKTVVSSLPGHDYNFSNLSKIKDNIYINIFDEMIIEKHEISGTFQVNIPPVLLGYTWSKTTYVSPREDCNGQNLKECTFLNIFATIEPQISYTICNPELDKFSDHTDVLERAQIFKKNCKALFPKRRITTTVFNDEGIQILVTRYIKALNPPQQLLDLFLHDSNATLDLVARFVSLIPIVSDTLDENDDFEIWMTSERCISLAIGTKEEHAILLCNFLLYFGKKALVLLGTSVLEGHVAYVLTQETDKYLLWNPLTGQCHKQFDPFCPLQSVDCLFDGENVWFNIQQNNSPMAVYFDYSKESFWKQLLPKNYQGPKAQSIQVTGFPIQMPYTDVQSVIDTVYQTGIHSSEFPQTEFALAVYIHPYPNNILSVWVYLASLAQRQ", "length": 1063, "header": "tr|F1SC44-1|F1SC44_PIG Isoform 1 of Coiled-coil and C2 domain containing 2B OS=Sus scrofa OX=9823 GN=CC2D2B PE=4 SV=3 CANONICAL=F1SC44-1" }, "locus": { "chromosome": "14", "start_pos": 107504342, "end_pos": 107414080, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011486.3", "url": "https://www.ensembl.org/id/ENSSSCT00000011486.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011185.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011185.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QUP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUP7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "non-motile cilium assembly", "id": "GO:1905515", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905515", "evidence": [ { "database": "UniProtKB", "id": "F1SC44", "url": "https://www.uniprot.org/uniprotkb/F1SC44" } ], "pmid": "" }, { "name": "protein localization to ciliary transition zone", "id": "GO:1904491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904491", "evidence": [ { "database": "UniProtKB", "id": "F1SC44", "url": "https://www.uniprot.org/uniprotkb/F1SC44" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "ciliary transition zone", "id": "GO:0035869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035869", "evidence": [ { "database": "UniProtKB", "id": "F1SC44", "url": "https://www.uniprot.org/uniprotkb/F1SC44" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 108, "end_pos": 110, "annotation": "n_glycosylation_sequon" }, { "start_pos": 321, "end_pos": 323, "annotation": "n_glycosylation_sequon" }, { "start_pos": 479, "end_pos": 481, "annotation": "n_glycosylation_sequon" }, { "start_pos": 615, "end_pos": 617, "annotation": "n_glycosylation_sequon" }, { "start_pos": 694, "end_pos": 696, "annotation": "n_glycosylation_sequon" }, { "start_pos": 697, "end_pos": 699, "annotation": "n_glycosylation_sequon" }, { "start_pos": 844, "end_pos": 846, "annotation": "n_glycosylation_sequon" }, { "start_pos": 968, "end_pos": 970, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SC44-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1063, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SC44-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SC44" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SC44", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC44" }, { "id": "PF24656", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24656" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CEP76/DRC7 peptidase-like", "eco_id": "ECO_0000259", "start_pos": 871, "end_pos": 987, "start_aa": "Glu", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SC44", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC44" }, { "id": "PF24652", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24652" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Centrosomal protein of 76 kDa C-terminal", "eco_id": "ECO_0000259", "start_pos": 1002, "end_pos": 1058, "start_aa": "Val", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SC44", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC44" }, { "id": "PF17661", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17661" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF5523", "eco_id": "ECO_0000259", "start_pos": 22, "end_pos": 259, "start_aa": "Val", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 108, "end_pos": 110 }, { "start_pos": 321, "end_pos": 323 }, { "start_pos": 479, "end_pos": 481 }, { "start_pos": 615, "end_pos": 617 }, { "start_pos": 694, "end_pos": 696 }, { "start_pos": 697, "end_pos": 699 }, { "start_pos": 844, "end_pos": 846 }, { "start_pos": 968, "end_pos": 970 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S9U8-1", "uniprot_ac": "F1S9U8", "uniprot_id": "F1S9U8_PIG", "mass": { "chemical_mass": 173560.0, "monoisotopic_mass": 173560.0 }, "refseq": { "ac": "XP_020939236", "name": "NACHT domain- and WD repeat-containing protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939236" }, "gene_names": [ { "name": "NWD1", "type": "recommended", "evidence": [ { "id": "F1S9U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9U8" } ] }, { "name": "NWD1", "type": "synonym", "evidence": [ { "id": "XP_020939236", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939236" } ] } ], "protein_names": [ { "name": "NACHT and WD repeat domain containing 1", "type": "synonym", "evidence": [ { "id": "F1S9U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9U8/entry#names_and_taxonomy" } ] }, { "name": "NACHT domain- and WD repeat-containing protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020939236", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939236" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S9U8", "url": "https://www.uniprot.org/uniprotkb/F1S9U8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NWD1", "url": "https://www.uniprot.org/uniprotkb/F1S9U8", "locus": { "chromosome": "2", "start_pos": 60800438, "end_pos": 60906046, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013865", "url": "https://www.ensembl.org/id/ENSSSCG00000013865" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013865", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013865", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100737957", "url": "https://www.ncbi.nlm.nih.gov/gene/100737957", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007111", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007111", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057588", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057588", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737957", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737957", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RGVQCVC", "url": "https://omabrowser.org/oma/group/RGVQCVC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S9U8", "url": "https://www.orthodb.org/?gene=F1S9U8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45013", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45013", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45013:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45013:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05729", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05729", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25469", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25469", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939236", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939236", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QVB1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVB1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVB1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9U8", "url": "https://www.uniprot.org/uniprotkb/F1S9U8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9U8-1", "url": "https://www.uniprot.org/uniprotkb/F1S9U8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDAEREALQSTAYPEVQTFCQKHGLMFEVVDLRWGIQNTEATDHMTTELCLEELDRCRKTSIGPAFVALLGDQYGPCPIPTLIEEKEWEALKAQLTASPRDLELVARRFWRDENAVPPTYLLQAPCTGEARGPEEATLTSVLRTGAQEARRLGLITQEQWHRYHRSVIEWEIERGLLSSTDGDRGVTVFLREIQDLNKHILEDCALKMVDRLMDGCLDTDAQNLLSSLKGRIANKQPGVLKAHHLTWSRDLVNPKNKAHARYLKELGEQFVARANYQVLEHLRELEVGRQELAWLYQEIRHHLGLSAEATRTFCGRQELLAQLGQQLRLSDSQPHPPLVLFGPPGIGKTALMCKLAERMPGLLGRKTVTVLRLLGTSQMSSNARGLLHSICFQVCLAYGLPLPPAQVLEAHARVVQFFHALLHTVSCRNFESLVILLDSVDEVDSVHRARRIPWLPPNCPPRVHLILSACSGQQGVLDTMQKVLTDPGAYWEVKPLSGNQGQEMIQLLLAASRRTLSPMQRDLLWASLPECGHPGRLRLAFEEARKWASFTVPAPLASTSREATHQLCVRLEQTHGQLLVARVLGYIVSSRHGLSEAELKDVLSLDDEVLQAVYQDWTPPSRELLRFPPLLWVRLRRDLGICLARRPVDGFLLLAIAHRQLAEVVQERYLSVPEKAKSHGVLADFFSGAWSQGTKKLITLPLVGKPLNLDRKVAPQPLWFSDAVANLRKLKELPYHLLHSGRIEELKQEVLGNMNWISCRGISGGIEGLLDDFDLCAPHVDCSEVSLVREALQLCRPAVELRGMERSVLYTELLARLHFFATSHPALVGQLCQQAQSWFRVSPFPVLVPLGGFLQPPGGPLRATLTGCHKGITAMAWSLEEKLLVVGTQEGMVAVWDMEEQQVIHILTGHRGEVRCVKVFAKGTLAISASKDHTLRLWNLLSGQEKITIWDGGSKDSTEPQIWSLHVDESKKAVYSASSSKVNAWNLETGELIFCILGDASEPWVSTAVLTSQATLLTASKGCVVCLWSSDTGKLLRKQHLSSIKEETLTCVVSVQKQGKMLTGTSKGSISLFSSEGDSLLEKLPEAVGFLVVSEDESLLAAGFGRSVRIFLADSQGFHRFMATDLEHEDMVETAVFGPENNLIVTGSRDALIQVWSLSEQGTLLDILEGVGAPVSLLAQAGTLVASASHQSSSFKVWDLGYTQKPRASTPFLDRTGLTAVSHNGSYIYFPKVGDKNKVTIWDLAEGEEQDTLDTSNEVKCLEVAEQTKLLFTGLVSGIVLVFPLNSRQDVMCIPPPEARKAINCMALSKDEGRLAIAYDSIVLVLDISPGDPCPVINGPTYTFYTQLPDTIASVAVLADYRVVYGMTNGDLFLYECANSKVFPLEAHRSRVTCVEVSHKEQLAVSGSEEALLCLWDLQTCKWKFEMSSTNSYCRGVQCACFSKDDNYVYAGLKDRSIIVWSVLDGTLLAVQFVHAIVNRIIPTANGFIAPTRHGYLIRERFQCPSSRVSQQDPLKNFKKAVWMVKSRQREELAAAAGALQDSRSGSAQGNESKSNKRSQVCLLV", "length": 1565, "header": "tr|F1S9U8-1|F1S9U8_PIG Isoform 1 of NACHT and WD repeat domain containing 1 OS=Sus scrofa OX=9823 GN=NWD1 PE=4 SV=5 CANONICAL=F1S9U8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QVB1-1", "url": "https://www.uniprot.org/uniprotkb/F1S9U8/entry#A0A5G2QVB1-1", "sequence": { "sequence": "MDAEREALQSTAYPEVQTFCQKHGLMFEVVDLRWGIQNTEATDHMTTELCLEELDRCRKTSIGPAFVALLGDQYGPCPIPTLIEEKEWEALKAQLTASPRDLELVARRFWRDENAVPPTYLLQAPCTGEARGPEEATLTSVLRTGAQEARRLGLITQEQWHRYHRSVIEWEIERGLLSSTDGDRGVTVFLREIQDLNKHILEDCALKMVDRLMDGCLDTDAQNLLSSLKGRIANKQPGVLKAHHLTWSRDLVNPKNKAHARYLKELGEQFVARANYQVLEHLRELEVGRQELAWLYQEIRHHLGLSAEATRTFCGRQELLAQLGQQLRLSDSQPHPPLVLFGPPGIGKTALMCKLAERMPGLLGRKTVTVLRLLGTSQMSSNARGLLHSICFQVCLAYGLPLPPAQVLEAHARVVQFFHALLHTVSCRNFESLVILLDSVDEVDSVHRARRIPWLPPNCPPRVHLILSACSGQQGVLDTMQKVLTDPGAYWEVKPLSGNQGQEMIQLLLAASRRTLSPMQRDLLWASLPECGHPGRLRLAFEEARKWASFTVPAPLASTSREATHQLCVRLEQTHGQLLVARVLGYIVSSRHGLSEAELKDVLSLDDEVLQAVYQDWTPPSRELLRFPPLLWVRLRRDLGICLARRPVDGFLLLAIAHRQLAEVVQERYLSVPEKAKSHGVLADFFSGAWSQGTKKLITLPLVGKPLNLDRKVAPQPLWFSDAVANLRKLKELPYHLLHSGRIEELKQEVLGNMNWISCRGISGGIEGLLDDFDLCAPHVDCSEVSLVREALQLCRPAVELRGMERSVLYTELLARLHFFATSHPALVGQLCQQAQSWFRVSPFPVLVPLGGFLQPPGGPLRATLTGCHKGITAMAWSLEEKLLVVGTQEGMVAVWDMEEQQVIHILTGHRGEVRCVKVFAKGTLAISASKDHTLRLWNLLSGQEKITIWDGGSKDSTEPQIWSLHVDESKKAVYSASSSKVNAWNLETGELIFCILGDASEPWVSTAVLTSQATLLTASKGCVVCLWSSDTGKLLRKQHLSSIKEETLTCVVSVQKQGKMLTGTSKGSISLFSSEGDSLLEKLPEAVGFLVVSEDESLLAAGFGRSVRIFLADSQGFHRFMATDLEHEDMVETAVFGPENNLIVTGSRDALIQVWSLSEQGTLLDILEGVGAPVSLLAQAGTLVASASHQSSSFKVWDLGYTQKPRASTPFLDRTGLTAVSHNGSYIYFPKVGDKNKVTIWDLAEGEEQDTLDTSNEVKCLEVAEQTKLLFTGLVSGIVLVFPLNSRQDVMCIPPPEARKAINCMALSKDEGRLAIAYDSIVLVLDISPGDPCPVINGPTYTFYTQLPDTIASVAVLADYRVVYGMTNGDLFLYECANSKVFPLEAHRSRVTCVEVSHKEQLAVSGSEEALLCLWDLQTCKWKFEMSSTVLT", "length": 1433, "header": "tr|A0A5G2QVB1-1|F1S9U8_PIG Computationally mapped isoform of NACHT and WD repeat domain containing 1 OS=Sus scrofa OX=9823 GN=NWD1 PE=4 SV=1 CANONICAL=F1S9U8-1" }, "locus": { "chromosome": "2", "start_pos": 60897323, "end_pos": 60803801, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076038.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076038.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068065.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068065.1" } ] } }, { "isoform_ac": "F1S9U8-1", "url": "https://www.uniprot.org/uniprotkb/F1S9U8/entry#F1S9U8-1", "sequence": { "sequence": "MDAEREALQSTAYPEVQTFCQKHGLMFEVVDLRWGIQNTEATDHMTTELCLEELDRCRKTSIGPAFVALLGDQYGPCPIPTLIEEKEWEALKAQLTASPRDLELVARRFWRDENAVPPTYLLQAPCTGEARGPEEATLTSVLRTGAQEARRLGLITQEQWHRYHRSVIEWEIERGLLSSTDGDRGVTVFLREIQDLNKHILEDCALKMVDRLMDGCLDTDAQNLLSSLKGRIANKQPGVLKAHHLTWSRDLVNPKNKAHARYLKELGEQFVARANYQVLEHLRELEVGRQELAWLYQEIRHHLGLSAEATRTFCGRQELLAQLGQQLRLSDSQPHPPLVLFGPPGIGKTALMCKLAERMPGLLGRKTVTVLRLLGTSQMSSNARGLLHSICFQVCLAYGLPLPPAQVLEAHARVVQFFHALLHTVSCRNFESLVILLDSVDEVDSVHRARRIPWLPPNCPPRVHLILSACSGQQGVLDTMQKVLTDPGAYWEVKPLSGNQGQEMIQLLLAASRRTLSPMQRDLLWASLPECGHPGRLRLAFEEARKWASFTVPAPLASTSREATHQLCVRLEQTHGQLLVARVLGYIVSSRHGLSEAELKDVLSLDDEVLQAVYQDWTPPSRELLRFPPLLWVRLRRDLGICLARRPVDGFLLLAIAHRQLAEVVQERYLSVPEKAKSHGVLADFFSGAWSQGTKKLITLPLVGKPLNLDRKVAPQPLWFSDAVANLRKLKELPYHLLHSGRIEELKQEVLGNMNWISCRGISGGIEGLLDDFDLCAPHVDCSEVSLVREALQLCRPAVELRGMERSVLYTELLARLHFFATSHPALVGQLCQQAQSWFRVSPFPVLVPLGGFLQPPGGPLRATLTGCHKGITAMAWSLEEKLLVVGTQEGMVAVWDMEEQQVIHILTGHRGEVRCVKVFAKGTLAISASKDHTLRLWNLLSGQEKITIWDGGSKDSTEPQIWSLHVDESKKAVYSASSSKVNAWNLETGELIFCILGDASEPWVSTAVLTSQATLLTASKGCVVCLWSSDTGKLLRKQHLSSIKEETLTCVVSVQKQGKMLTGTSKGSISLFSSEGDSLLEKLPEAVGFLVVSEDESLLAAGFGRSVRIFLADSQGFHRFMATDLEHEDMVETAVFGPENNLIVTGSRDALIQVWSLSEQGTLLDILEGVGAPVSLLAQAGTLVASASHQSSSFKVWDLGYTQKPRASTPFLDRTGLTAVSHNGSYIYFPKVGDKNKVTIWDLAEGEEQDTLDTSNEVKCLEVAEQTKLLFTGLVSGIVLVFPLNSRQDVMCIPPPEARKAINCMALSKDEGRLAIAYDSIVLVLDISPGDPCPVINGPTYTFYTQLPDTIASVAVLADYRVVYGMTNGDLFLYECANSKVFPLEAHRSRVTCVEVSHKEQLAVSGSEEALLCLWDLQTCKWKFEMSSTNSYCRGVQCACFSKDDNYVYAGLKDRSIIVWSVLDGTLLAVQFVHAIVNRIIPTANGFIAPTRHGYLIRERFQCPSSRVSQQDPLKNFKKAVWMVKSRQREELAAAAGALQDSRSGSAQGNESKSNKRSQVCLLV", "length": 1565, "header": "tr|F1S9U8-1|F1S9U8_PIG Isoform 1 of NACHT and WD repeat domain containing 1 OS=Sus scrofa OX=9823 GN=NWD1 PE=4 SV=5 CANONICAL=F1S9U8-1" }, "locus": { "chromosome": "2", "start_pos": 60897323, "end_pos": 60801312, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015145.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015145.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014740.5", "url": "https://www.ensembl.org/id/ENSSSCP00000014740.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QVB1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVB1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100737957", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737957", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M8F2-1", "protein_name": "NACHT domain- and WD repeat-containing protein 1 isoform X1", "gene_name": "Nwd1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDAEREVLQCTAYPEVQSFCQKHGLTFEVVDLRWGVPNTQATDHLTIELCLEELDRCQKTSIGPAFVALLGDQYGPCLVPQRIEEKEWKALRAQLTSRPQDLELVARHFRRDDNAIPPTYLLQPPGSVGAPEPEEATLTSVLQGGAQEAWRLGLINQEQWKCYHRSVIEWEIERGLLSSAAGAQGATVFLRDVQDLSKHILDDCSLKMVDRLADGCLDTNSQSLLSGLKGRILDAQPGALKSHRLPWSRDLVNPKNKAHARYLKELSEQFVARTNHQVLEQLRELESARQELGWLYQEIRHHLWRSTESTRIFCGHQELLAQLGQRLRQDDSRSHTPLVLFGPPGIGKTSLMCKLAEQVPELLGHKTVAVLRLLGTSKMSLDARSLLRSLSFQLCLAYGLPLPPPQVLEVHGRVGHFFHRLLHTVSCRNFESLVLLLDSADDLDSICHSRRVSWLPLKCPPKVHVILSTCSGQQVLYTLQQTLKDPSAYWEVKALSGCQGQELIQLLLAAERRTLSPAQRDILWASLPECGHPGRLRLAFEEARKWASFTVPVPLAATAEEATHQLCIRLENTHGQLLVAHVLGYIVSSRYGLSEAELKDVLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLAHCLTRRAVDGCTLLAIAHRQLSKVIQVRYLSGPERSKRHAVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFSGTVANWRKLTELPFHLLHAGRMEELKQEVLGNMNWISCRGISGSIEDLLDDFDMCAPHMDSPEVSLVREALQLCRPAVELRGMENSILYTELLARLLFFATSHPAMIGQLCQQAQSWFRACPHPMLVPLAGFLQPPGGRLQATLTGCHKGITAVAWSLEEKLLVVGTQDGIMVVWDVEEQQVVHILTGHTAEVKCIRVFAQGTLAISASKDHTLRLWSLLSGQEKVTIVDRGSPNPTEPQRWGLHVDEINKVVYSTSSAKINAWNLETTKLAFCVPGEASDPWACVAVLAAQGVLLAVSKGGEVSLWSSATGKLQGKRQLSSIKEETPTCAVCIQTQVKLVTGFSSGSLSLVSSGEDSLLEKLPEAVGFLVASEDDSVLAAGFGRSVRIFLADSQGFHRFMATDLEHEDVVETAVLGPENNVIITGSRDALIQVWSLSEQGTLLDVLEGVGAPASLLVRGGTLVVSASWKSSSLKVWDLKSTSKPRPPAPFLDRTGLAAVSHHGSYIYFPKVGDKNKVTIWDLAEGEEQDSLDTSNEVRCLEVAEQAKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAVNCMSLSKSEDRLAIAYDNIVLVLDISPGDPCPAIEGPTYTFYTQLPETIASVAVLGDYRVLYGMSDGGLFLYDCARSKVFPLEAHGSRVSCAEVSHGEQLAVSGAEDALLCLWDLQACRGMFEMSYESSYCRGVRCACFSKDDKYVFAGMKDRSIIAWSALDGTLLAVQFVHAVVNRIIPTSNGFMAPTSHGYLIRERFQCPSARASQQDPLKNFKKAVWLVKTRQREEQLAVAEASQDTGSVAAEGKESKSNKHSQVCLIL", "length": 1564 }, "evidence": [ { "id": "F1S9U8", "url": "https://omabrowser.org/oma/group/F1S9U8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I6AD74-1", "protein_name": "SIN3 transcription regulator family member B", "gene_name": "Nwd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTEREALQCTAYPEVQSFCQKHGLAFEAVDLRWGIPNTQATDYLTTELCLEELERCQKTSVGPAFVALLGDQYGPCPVPQRIEEKEWEALRAQLTSRPRDLELVTRHFQRDDNTIPPTYVLQPPGSGVVPGPEEATLTSVLRGGAQEAWRLGLISQEQWMCYHRSVIEWEIEHGLLNSARGDQGATVFLRDVQDLSKHILDDCCLKMVDRLADGCLDTNAQSLLSGLKGRILDAQPGALKSHHLPWSRDLVNPKNKTHARYLKQLSEQFVARTNHQVLEQLRELELARQELGWLYQEIRHHLWQSTESTKVFCGHQELLAQLKQRLRQDESRTHTPLVLFGPPGIGKTSLMCKLAQQVPELLGHKTVAVLRLLGTSKLSLDARSLLRSLSFQLCLAYGLPLPPAQVLEAHSRVGHFFHILLHTVSQRNFESLVLLLDSVDDLDSIRHTPRVSWLPLKCPPRVHLILSACSGQQVLCNLQQTLKDPSAYWEVKALSGSQGQEFIQLLLAAERRMLSPGQRDVLWASLPECGHPGRLRLAFEEARKWASFTVPVPLATTAEEATHQFCIRLEETHGQLLVARVLGYIVSSRYGLSEAELKDVLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLGHCLVRRPVDGCILLAIAHRQLSQVIQVRYLSGPERAKRHGVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFSGTVANWRKLTELPFHLLHAGCLEELKQEVLGNMSWISCRGISGGIEDLLDDFDMCAPHMDSPEVYLVREAIQLCRPAVELRGLEKSILYTELLARLLFFATSHPAMIGQLCQQAQSWFRACPYPMLVPLAGFLQPPGGPLRATLTGCHKGITAIAWSLEEKLLVVGTQDGTMVVWDVEEQQVVHVLMGHTAEVRCVRVFAQGTLAISASKDHTLRLWSLLSGQEKATILDGGSPNPTEQQGWDLHVDEIKNVVYSTSGTKINVWDLETSKLVFCITGDASDPWVCVALLAAQGLLLALTEGGQVSLWSSAVGKLQEKHQLCSIKEETPTCAVSIQTRARLVVGFSSGSVALVCAGEDRLLEKLPEAVGFLAVSEDDSLLAVGFGRCVRVFLADSQDFHRFMATDLEHEDVVETAVLGPENNLIITASRDALIQVWSLSEQGTLLSVFESAGAPASLLVLCETLVVSASWKSSSFKAWDLRSTQKPPSPTPFLDRTGLATVSHHGSYVYFPKVGDKNKVTIWDLAEGEEQDSLDTSNEVCCLEVAEQTKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAVNCMSVSKSEDRLAIAYDNIVLVLDISPGDLCPAIEGPTYTFYTQLPETIVRVAVLADYRVVYGMSDGSLFLYDCAQSKVFPLEAHGSRVSCVEVSHREQLAVSGAEDALLCLWDLQACREKFKMSYESSYCRGVRCACFSKDDKHVFTGMEDRSIIAWSALDGTLLAVQFVHAVVNRIIPTSNGFMAPTSHGYLIRERFQCPSARASQQDPLKNFKKAVWLIKTRQREDLAEAEAPQDAEPVAVEGKESKSNKHSQVCLIL", "length": 1563 }, "evidence": [ { "id": "F1S9U8", "url": "https://omabrowser.org/oma/group/F1S9U8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A6H603-1", "protein_name": "NACHT domain- and WD repeat-containing protein 1", "gene_name": "Nwd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTEREALQCTAYPEVQSFCQRHGLAFEVVDLRWGIPNTQATDYLTTELCLEELERCQKTSIGPAFVALLGDQYGPCPVPRRIEEKEWEALRAQLTSRPRDLELVTRHFQRDDNTIPPTYVLQPSGSLVVPGPEEATLTSVLRGGAQEAWRLGLISQEQWMCYHRSVIEWEIELGLLSSARGDQGATVFLRDVQDLNKHILDDCSLKMVDRLVDGCLDTNAQSLLSGLKGRILDAQPGALKSHHLSWSRDLVNPKNKAHARYLKQLSEQFVARTNHQVLEQLRELELARQELGWLYQEIRHHLWQSTESTKVFCGHQELLAQLRQQLRQDESRTHTPLVLFGPPGIGKTSLMCKLAQQVPELLGHKTVVVLRLLGTSKLSLDARSLLRSLSFQVCLAYGLPLPPAQVLEAHSRVGHFFHTLLHTVSQRNFESLVLLLDSVDDLDSICHSPRVSWLPLKCPPRVHLILSTCSGQQVLHNLQQTLKDPSTYWEVKALSGSQGQEFIQLLLAAEKRMLSPGQRDVLWASLPECGHPGRLRLAFEEARKWASFTVPVPLATTAEEATHQLCIRLEETHGALLVAHVLGYIVSSRYGLSEAELKDVLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLGHCLVRRPVDGCMLLAIAHRQLSQVIQVRYLSGPERAKRHGVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFSSTVANLRKLTELPFHLLHAGRLEELKQEVLGNMSWISCRGISGGIEVLLDDFDMCAPHMNSPEVDLVREAIQLCGPAVELRGLEKSVLYTELLARLLFFAASHPAMIGQLCQQAQSWFRACPYPMLVPLAGFLQPPGGPLRATLTGCHKGITAIAWSLEEKLLVVGTQDGAMVVWDVEEQQVVHVLMGHTAEVKCVRVFAQGTLAISASKDHTLRLWSLLSGQEKVTILDGGSQNPTEPQSWDLHVDERNNVVYSTSGARINMWNLETSKLVFCITGDVSDPWVCVALLAAQGLLLALSKGGQVSLWSSAMGKLQEKHQLSSIKEETPTCAVSIQSRARLVAGFSSGSIALVSAGEDRLLEKLPEAVGFLVVSEDDSLLVAGFGRFVRIFLADSQGFHRFMASDLEHEDMVETAVLGPENNLIITGSRDALIQVWSLSEQGTLLNVLEGVGAPVSLLVRGGTLVVSASRKSSSFKVWDLKSTKKLQSPTPFLDRTGLAAVSHHGSFVYFPKVGDKNKVTIWDLAEGEEQDCLDTSNEVRCLEVAEQAKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAVNCMSLSKSENRLAIAYDNIVLVLDISPGDPCPAIEGPTYTFYTQLPETIVSVAVLADYRVVYGMSDGSLFLYDCACSKVFPLEAHGSRVSCVEVSHSEQLAVSGAEDALLCLWDLQACRGMFEMSYENSCCRGVRCACFSRDDKHVFAGMEDRSVTAWSTVDGTLLAVQFVHAVINRIIPTSNGFMAPTSHGYLIRERFQCPSVRASQQDPLKNFKKAVWLVKTRQREELAAAEASQDAEPVAVEGKESKSNKRSQVCLIL", "length": 1563 }, "evidence": [ { "id": "F1S9U8", "url": "https://omabrowser.org/oma/group/F1S9U8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q149M9-1", "protein_name": "NACHT domain- and WD repeat-containing protein 1", "gene_name": "NWD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQRGKPCRALPTLKCQTFCQRHGLMFEVVDLRWGIRNIEATDHLTTELCLEEVDRCWKTSIGPAFVALIGDQYGPCLIPSRIDEKEWEVLRDHLTARPSDLELVARYFQRDENAFPPTYVLQAPGTGEACEPEEATLTSVLRSGAQEARRLGLITQEQWQHYHRSVIEWEIERSLLSSEDREQGATVFLREIQDLHKHILEDCALRMVDRLADGCLDADAQNLLSSLKSHITDMHPGVLKTHRLPWSRDLVNPKNKTHACYLKELGEQFVVRANHQVLTRLRELDTAGQELAWLYQEIRHHLWQSSEVIQTFCGRQELLARLGQQLRHDDSKQHTPLVLFGPPGIGKTALMCKLAEQMPRLLGHKTVTVLRLLGTSQMSSDARGLLKSICFQVCLAYGLPLPPAQVLDAHTRVVQFFHTLLHTVSCRNFESLVLLLDAMDDLDSVRHARRVPWLPLNCPPRVHLILSACSGALGVLDTLQRVLLDPEAYWEVKPLSGNQGQQMIQLLLAAARRTLSPVHTDLLWASLPECGNPGRLRLAFEEARKWASFTVPVPLATTAEEATHQLCTRLEQTHGQLLVAHVLGYIVSSRHGLSEAELKDVLSLDDEVLQDVYRDWTPPSKELLRFPPLLWVRLRRDLGYYLARRPVDGFTLLAIAHRQLVEVVRERYLSGSERAKRHGVLADFFSGTWSQGTKKLITLPLVGKPLNLDRKVAPQPLWFSHTVANLRKLKELPYHLLHSGRLEELKQEVLGSMSWISCRGISGGIEDLLDDFDLCAPHLDSPEVGLVREALQLCRPAVELRGMERSLLYTELLARLHFFATSHPALVGQLCQQAQSWFQLCAHPVLVPLGGFLQPPGGPLRATLSGCHKGITAMAWGVEEKLLVIGTQDGIMAVWDMEEQHVIHMLTGHTGEVRCVKIFAKGTLANSASKDYTLHLWNLLSGQEKFTIWDGGSKNPAEPQIWNLHVDEAHKVVYSASGSKINAWNLETAEPVFHILGDASDPWMCMAVLASQATLLTVSRDGVVSLWSSATGKLQGKQHMSSIKEETPTCAVSVQKQGKLVTGFSNGSISLVSSKGDRLLEKLPDAVRFLVVSEDESLLAAGFGRSVRIFLADSRGFRRFMAMDLEHEDMVETAVFGTENNLIITGSLDALIQVWSLSEQGTLLDILEGVGAPVSLLARGGALVASASPQSSSFKVWDLSDAHRSRVPAPFLDRTGLTAVSHNGSYVYFPKIGDKNKVTIWDLAEGEEQDSLDTSSEIRCLEVAEQRKLLFTGLVSGVVLVFPLNSRQDVICIPPPEARKAINCMSLSKCEDRLAIAYDNIVLVLDITSGDPCPVIDGPRYTFYTQLPETLSSVAILTDYRVVYSMTNGDLFLYECATSKAFPLETHRSRVACVEVSHKEQLVVSGSEDALLCLWDLQARKWKFEMSYTSSYCRGVQCACFSKDDKYVYVGLKDRSILVWSVLDGTLLTVQFVHAVVNRIIPTTSGFIAPTRHGYLIRENFQCLSAKASPQDPLKNFKKAMWMVKSRQREELVAAAGAPQDLESESAQGNETKSNKCSQVCLIV", "length": 1564 }, "evidence": [ { "id": "F1S9U8", "url": "https://omabrowser.org/oma/group/F1S9U8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1S9U8", "url": "https://www.uniprot.org/uniprotkb/F1S9U8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F1S9U8", "url": "https://www.uniprot.org/uniprotkb/F1S9U8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1224, "end_pos": 1226, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1551, "end_pos": 1553, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S9U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9U8" }, { "id": "PF05729", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05729" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NACHT", "eco_id": "ECO_0000259", "start_pos": 338, "end_pos": 506, "start_aa": "Leu", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1S9U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9U8" }, { "id": "PF25469", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25469" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NWD1/2-like winged helix-turn-helix", "eco_id": "ECO_0000259", "start_pos": 569, "end_pos": 672, "start_aa": "Val", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1224, "end_pos": 1226 }, { "start_pos": 1551, "end_pos": 1553 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SFK6-1", "uniprot_ac": "F1SFK6", "uniprot_id": "F1SFK6_PIG", "mass": { "chemical_mass": 63760.0, "monoisotopic_mass": 63760.0 }, "refseq": { "ac": "XP_001929255", "name": "transmembrane protein 87A isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929255" }, "gene_names": [ { "name": "TMEM87A", "type": "recommended", "evidence": [ { "id": "F1SFK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFK6" } ] }, { "name": "TMEM87A", "type": "synonym", "evidence": [ { "id": "XP_001929255", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929255" } ] } ], "protein_names": [ { "name": "Transmembrane protein 87A", "type": "synonym", "evidence": [ { "id": "F1SFK6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFK6/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein 87A isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001929255", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929255" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SFK6", "url": "https://www.uniprot.org/uniprotkb/F1SFK6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM87A", "url": "https://www.uniprot.org/uniprotkb/F1SFK6", "locus": { "chromosome": "1", "start_pos": 129142161, "end_pos": 129098388, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004730", "url": "https://www.ensembl.org/id/ENSSSCG00000004730" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004730", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004730", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154984", "url": "https://www.ncbi.nlm.nih.gov/gene/100154984", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009637", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009637", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053937", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053937", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054101", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054101", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154984", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154984", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IFMRFLN", "url": "https://omabrowser.org/oma/group/IFMRFLN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B758", "url": "https://www.orthodb.org/?gene=A0A287B758", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SFK6", "url": "https://www.orthodb.org/?gene=F1SFK6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21229", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21229", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21229:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21229:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06814", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06814", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21901", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21901", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8980692", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001929255", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929255", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B758", "url": "https://www.uniprot.org/uniprotkb/A0A287B758", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B758-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B758-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UZQ0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UZQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UZQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWN7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWN7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QWN7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWN7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0S1Z7", "url": "https://www.uniprot.org/uniprotkb/A0A8D0S1Z7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0S1Z7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0S1Z7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1ZF19", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ZF19", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1ZF19-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1ZF19-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFK6", "url": "https://www.uniprot.org/uniprotkb/F1SFK6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFK6-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVKMASAAWLQVLPVILLLLLGAPTSPLSHFGVGPASVAAADRSKWRIPISLGKNYFSFGKILFKNTTIFLKFDGEPCDVSLNITWYLKSADCYNEIYNFKTEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKAQSFSGEFIHRLPLLGEKQESKENGTNLTVTGDKTVMHDPLKTWQDAPYIFIVHVGISSSKESSKENSPSSLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 560, "header": "tr|F1SFK6-1|F1SFK6_PIG Isoform 1 of Transmembrane protein 87A OS=Sus scrofa OX=9823 GN=TMEM87A PE=3 SV=3 CANONICAL=F1SFK6-1" }, "isoforms": [ { "isoform_ac": "A0A287B758-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK6/entry#A0A287B758-1", "sequence": { "sequence": "MAVKMASAAWLQVLPVILLLLLGAPTSPLSHFGVGPASVAAADRSKWRIPISLGKNYFSFGKILFKNTTIFLKFDGEPCDVSLNITWYLKSADCYNEIYNFKTEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKAQSFSGEFIHRLPLLGEKQESKENGTNLTVTGDKTVMHDPLKTWQDAPYIFIVHVGISSSKESSKENSPSSLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGHFSYPLALIVNLALSAIDACIILWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 561, "header": "tr|A0A287B758-1|A0A287B758_PIG Computationally mapped isoform of Transmembrane protein 87A OS=Sus scrofa OX=9823 GN=TMEM87A PE=3 SV=1 CANONICAL=F1SFK6-1" }, "locus": { "chromosome": "1", "start_pos": 129140946, "end_pos": 129098476, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061261.2", "url": "https://www.ensembl.org/id/ENSSSCT00000061261.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052301.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052301.1" } ] } }, { "isoform_ac": "A0A4X1UZQ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK6/entry#A0A4X1UZQ0-1", "sequence": { "sequence": "VAHTDIVVDGEPCDVSLNITWYLKSADCYNEIYNFKTEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKAQSFSGEFIHRLPLLGEKQESKENGTNLTVTGDKTVMHDPLKTWQDAPYIFIVHVGISSSKESSKENSPSSLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 494, "header": "tr|A0A4X1UZQ0-1|A0A4X1UZQ0_PIG Computationally mapped isoform of Transmembrane protein 87A OS=Sus scrofa OX=9823 GN=TMEM87A PE=3 SV=1 CANONICAL=F1SFK6-1" }, "locus": { "chromosome": "1", "start_pos": 129140946, "end_pos": 129098613, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081321.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081321.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068930.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068930.1" } ] } }, { "isoform_ac": "A0A5G2QWN7-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK6/entry#A0A5G2QWN7-1", "sequence": { "sequence": "MASAAWLQVLPVILLLLLGAPTSPLSHFGVGPASVAAADRSKWRIPISLGKNYFSFGKILFKNTTIFLKFDGEPCDVSLNITWYLKSADCYNEIYNFKTEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKAQSFSGEFIHRLPLLGEKQESKENGTNLTVTGDKTVSVVGNLRH", "length": 178, "header": "tr|A0A5G2QWN7-1|F1SFK6_PIG Computationally mapped isoform of Transmembrane protein 87A OS=Sus scrofa OX=9823 GN=TMEM87A PE=3 SV=1 CANONICAL=F1SFK6-1" }, "locus": { "chromosome": "1", "start_pos": 129109656, "end_pos": 129098488, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099039.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099039.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075063.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075063.1" } ] } }, { "isoform_ac": "A0A8D0S1Z7-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK6/entry#A0A8D0S1Z7-1", "sequence": { "sequence": "MPGSFPKRRVVMERFFISRGKNYFSFGKILFKNTTIFLKFDGEPCDVSLNITWYLKSADCYNEIYNFKTEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKAQSFSGEFIHRLPLLGEKQESKENGTNLTVTGDKTVMHDPLKTWQDAPYIFIVHVGISSSKESSKENSPSSLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 526, "header": "tr|A0A8D0S1Z7-1|A0A8D0S1Z7_PIG Computationally mapped isoform of Transmembrane protein 87A OS=Sus scrofa OX=9823 GN=TMEM87A PE=3 SV=1 CANONICAL=F1SFK6-1" }, "locus": { "chromosome": "1", "start_pos": 129140946, "end_pos": 129098833, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077870.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077870.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062302.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062302.1" } ] } }, { "isoform_ac": "A0A8D1ZF19-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK6/entry#A0A8D1ZF19-1", "sequence": { "sequence": "MAVKMASAAWLQVLPVILLLLLGAPTSPLSHFGVGPASVAAADRSKWRIPISLGKNYFSFGKILFKNTTIFLKFDGEPCDVSLNITWYLKSADCYNEIYNFKTEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKAQSFSGEFIHRLPLLGEKQESKENGTNLTVTGDKTVMHDPLKTWQDAPYIFIVHVGISSSKESSKENSPSSLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSCNKESILLKTSS", "length": 569, "header": "tr|A0A8D1ZF19-1|A0A8D1ZF19_PIG Computationally mapped isoform of Transmembrane protein 87A OS=Sus scrofa OX=9823 GN=TMEM87A PE=3 SV=1 CANONICAL=F1SFK6-1" }, "locus": { "chromosome": "1", "start_pos": 129141134, "end_pos": 129098476, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072547.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072547.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065007.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065007.1" } ] } }, { "isoform_ac": "F1SFK6-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK6/entry#F1SFK6-1", "sequence": { "sequence": "MAVKMASAAWLQVLPVILLLLLGAPTSPLSHFGVGPASVAAADRSKWRIPISLGKNYFSFGKILFKNTTIFLKFDGEPCDVSLNITWYLKSADCYNEIYNFKTEEVETYLENLKEKKGLSGKYQTSSKLFQNCSELFKAQSFSGEFIHRLPLLGEKQESKENGTNLTVTGDKTVMHDPLKTWQDAPYIFIVHVGISSSKESSKENSPSSLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 560, "header": "tr|F1SFK6-1|F1SFK6_PIG Isoform 1 of Transmembrane protein 87A OS=Sus scrofa OX=9823 GN=TMEM87A PE=3 SV=3 CANONICAL=F1SFK6-1" }, "locus": { "chromosome": "1", "start_pos": 129140946, "end_pos": 129098476, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005226.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005226.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005100.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005100.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QWN7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QWN7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154984", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154984", "resource": "KEGG Pathway" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LJ03-1", "protein_name": "Transmembrane protein 87A isoform X1", "gene_name": "Tmem87a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAVKMAVAAWLQVSPVIFLLLGAQPFPLSFFGAGPAPVFAADRSKWHIPMPSGKNYFSFGKILFRNTTILLKFDGEPCDLSFNITWFLKSADCYNEIYNFKADEVESYLENLKEKKGLSGRYQTSSKLFQNCSELYKAQSFSGDLMHRLPLLGEKQEAKENGTNLTFTGDKIAFHEPLQTWQDAPYIFIVHVGISSSKESPKENALSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMFEKAVFYAEFQNIRYKGESVQDALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGYFSYSLALIVSLALSAVDACIILWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMILWRPSANNQRFAFSPLSEEDEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKTQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 560 }, "evidence": [ { "id": "F1SFK6", "url": "https://omabrowser.org/oma/group/F1SFK6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I6GIL4-1", "protein_name": "Transmembrane protein 87A", "gene_name": "Tmem87a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVKMAVAAWLQVSPVIFLLLGAQPFPLSFLGAGPAPVFAADRSKWHVPMPSGKSYFNFGKILFRNTTIVLKFDGEPCDQSLNITWFLKSADCYNEVYNFKADEVETYLENLKEKKGLSGRYQTSSKVFQNCSELYKAQSFSGDLMHRLPLLGEKQEAKENATNLTFTGDKIAMHEPLQTWQDAPYIFIVHVGISSSKESPKENALSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMFEKAVFYAEFQNIRYKGESVQNALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMILWRPSANNQRFAFSPLSEEDEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKANKTQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 559 }, "evidence": [ { "id": "F1SFK6", "url": "https://omabrowser.org/oma/group/F1SFK6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BXN9-1", "protein_name": "Golgi-pH regulating cation channel", "gene_name": "Tmem87a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAVAAWLQVSPVIFLLLGAQPFPLSFLGAGPAPVFAADRSKWHIPMPSGKGYFNFGKILFRNTTILLKFDGEPCDQSLNITWFLKSADCYNEIYNFKADEIESYLENLKGKKGLSGRYQTSSRLFQNCSELYKAQSFSGDFTHRLPLLGEKQEAKENATNVTFTGDKIAMHEPLQTWQDAPYIFIVHVGISSSKESPKENALSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMFEKAVFYAEFQNIRYKGESVQNALVLAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMILWRPSANNQRFAFSPLSEEDEEDEQKEPMLKESFEGMKMRSTKQEPNGTSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 555 }, "evidence": [ { "id": "F1SFK6", "url": "https://omabrowser.org/oma/group/F1SFK6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NBN3-1", "protein_name": "Golgi-pH regulating cation channel", "gene_name": "TMEM87A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFDGEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGDFMHRLPLLGEKQEAKENGTNLTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTVEVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEFQNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVLRVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFIIWTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKESFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME", "length": 555 }, "evidence": [ { "id": "F1SFK6", "url": "https://omabrowser.org/oma/group/F1SFK6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F1SFK6", "url": "https://www.uniprot.org/uniprotkb/F1SFK6" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F1SFK6", "url": "https://www.uniprot.org/uniprotkb/F1SFK6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SFK6", "url": "https://www.uniprot.org/uniprotkb/F1SFK6" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SFK6", "url": "https://www.uniprot.org/uniprotkb/F1SFK6" } ], "pmid": "" }, { "name": "Golgi cisterna membrane", "id": "GO:0032580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032580", "evidence": [ { "database": "UniProtKB", "id": "F1SFK6", "url": "https://www.uniprot.org/uniprotkb/F1SFK6" } ], "pmid": "" } ] }, { "name": 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}, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S9W2-1", "uniprot_ac": "F1S9W2", "uniprot_id": "F1S9W2_PIG", "mass": { "chemical_mass": 44716.0, "monoisotopic_mass": 44716.0 }, "refseq": { "ac": "XP_003123522", "name": "solute carrier family 35 member E1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123522" }, "gene_names": [ { "name": "SLC35E1", "type": "recommended", "evidence": [ { "id": "F1S9W2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9W2" } ] }, { "name": "SLC35E1", "type": "synonym", "evidence": [ { "id": "XP_003123522", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123522" } ] } ], "protein_names": [ { "name": "Solute carrier family 35 member E1", "type": "synonym", "evidence": [ { "id": "F1S9W2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9W2/entry#names_and_taxonomy" } ] }, { "name": "solute carrier family 35 member E1", "type": "synonym", "evidence": [ { "id": "XP_003123522", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123522" } ] } ], "function": [ { "annotation": "Putative transporter.", "evidence": [ { "database": "UniProtKB", "id": "F1S9W2", "url": "https://www.uniprot.org/uniprotkb/F1S9W2#function" }, { "database": "UniProtKB", "id": "ARBA00093767", "url": "https://www.uniprot.org/uniprotkb/ARBA00093767#function" }, { "database": "UniProtKB", "id": "A0A287AUH0", "url": "https://www.uniprot.org/uniprotkb/A0A287AUH0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S9W2", "url": "https://www.uniprot.org/uniprotkb/F1S9W2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC35E1", "url": "https://www.uniprot.org/uniprotkb/F1S9W2", "locus": { "chromosome": "2", "start_pos": 61058093, "end_pos": 61037861, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013861", "url": "https://www.ensembl.org/id/ENSSSCG00000013861" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013861", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013861", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512396", "url": "https://www.ncbi.nlm.nih.gov/gene/100512396", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004853", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004853", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050186", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050186", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512396", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512396", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FWYTVSS", "url": "https://omabrowser.org/oma/group/FWYTVSS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S9W2", "url": "https://www.orthodb.org/?gene=F1S9W2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11132", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11132", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03151", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03151", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003123522", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123522", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AUH0", "url": "https://www.uniprot.org/uniprotkb/A0A287AUH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AUH0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AUH0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QXZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXZ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QXZ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXZ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9W2", "url": "https://www.uniprot.org/uniprotkb/F1S9W2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9W2-1", "url": "https://www.uniprot.org/uniprotkb/F1S9W2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAAAAVGVGAGAGGPGAAGGGSGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPGPHPSPGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPITTGDLSSKEHHRSPLEKPHNGLLFPQHGDYQYGRNNILTDHFQYSRQSYPNSYSLNRYDV", "length": 412, "header": "tr|F1S9W2-1|F1S9W2_PIG Isoform 1 of Solute carrier family 35 member E1 OS=Sus scrofa OX=9823 GN=SLC35E1 PE=3 SV=1 CANONICAL=F1S9W2-1" }, "isoforms": [ { "isoform_ac": "A0A287AUH0-1", "url": "https://www.uniprot.org/uniprotkb/F1S9W2/entry#A0A287AUH0-1", "sequence": { "sequence": "MAAAAAAVGVGAGAGGPGAAGGGSGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPGPHPSPGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPITTGDLSSKEHHRSPLEKPHNGLLFPQHGDYQYGRNNILTDHFQEGQGGHCFLSSLFPC", "length": 410, "header": "tr|A0A287AUH0-1|A0A287AUH0_PIG Computationally mapped isoform of Solute carrier family 35 member E1 OS=Sus scrofa OX=9823 GN=SLC35E1 PE=3 SV=2 CANONICAL=F1S9W2-1" }, "locus": { "chromosome": "2", "start_pos": 61055499, "end_pos": 61037877, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042579.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042579.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047579.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047579.2" } ] } }, { "isoform_ac": "A0A5G2QXZ9-1", "url": "https://www.uniprot.org/uniprotkb/F1S9W2/entry#A0A5G2QXZ9-1", "sequence": { "sequence": "MPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLVSWPWSRVVKPSFLTGGLKEGALRNQQVQRRPWRGGTWGK", "length": 148, "header": "tr|A0A5G2QXZ9-1|F1S9W2_PIG Computationally mapped isoform of Solute carrier family 35 member E1 OS=Sus scrofa OX=9823 GN=SLC35E1 PE=3 SV=1 CANONICAL=F1S9W2-1" }, "locus": { "chromosome": "2", "start_pos": 61047322, "end_pos": 61038693, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082963.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082963.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063083.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063083.1" } ] } }, { "isoform_ac": "F1S9W2-1", "url": "https://www.uniprot.org/uniprotkb/F1S9W2/entry#F1S9W2-1", "sequence": { "sequence": "MAAAAAAVGVGAGAGGPGAAGGGSGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPGPHPSPGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPITTGDLSSKEHHRSPLEKPHNGLLFPQHGDYQYGRNNILTDHFQYSRQSYPNSYSLNRYDV", "length": 412, "header": "tr|F1S9W2-1|F1S9W2_PIG Isoform 1 of Solute carrier family 35 member E1 OS=Sus scrofa OX=9823 GN=SLC35E1 PE=3 SV=1 CANONICAL=F1S9W2-1" }, "locus": { "chromosome": "2", "start_pos": 61054803, "end_pos": 61037877, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015140.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015140.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014735.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014735.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QXZ9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXZ9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512396", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512396", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9S2L3-1", "protein_name": "Solute carrier family 35 member E1", "gene_name": "SLC35E1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAAAAVGVGAGAGGSGAAGGGGGGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPGPHQSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAIFFMIPTWVLVDLSAFLVSSDLTYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMLTAILGVFLYNKTKYDANQQARKHLLPVTTGDLSSKEHHRSPLEKPHNGTLFPPHSDYQYGRNNILTDHFQYGRPSYPNSYTLNRYDV", "length": 412 }, "evidence": [ { "id": "F1S9W2", "url": "https://omabrowser.org/oma/group/F1S9W2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NE93-1", "protein_name": "Solute carrier family 35 member E1", "gene_name": "SLC35E1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAPLAAPGGGGAATAAAGGAGSRGGRGPALREGARVSALCLAWYGLSAGGNVVNKLLLGGFPRPVTVSLFHILGLCGLLPPLLRAWRVPPAGPAQLPPRAYPRYILPLAFGKYFASVSAHVSLWRVPVSYAHTVKATMPIWVVLLSRIIMKEKQTTKVYLSLIPIITGVLLATVTELSFDMWGLISALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSSFLVENDLSTMSHWPWTLMLLIISGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQEAKKQLLPVTTGDLVNLDRHRNTPEKSQNGLTAFAPHGDYQYGRSNVLTDHFQYSRQNYPPTYNLNRFDI", "length": 406 }, "evidence": [ { "id": "F1S9W2", "url": "https://omabrowser.org/oma/group/F1S9W2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P0C6B1-1", "protein_name": "Solute carrier family 35 member E1", "gene_name": "Slc35e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAAAAGPGAGAGIPGASGGGGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPASGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSTFLVSSDLAYVSQWPWTLLLLVVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVIAVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARRHLLPVSTSDLSNREHLRSPMEKPHNGALFPQQGDFQYRNILLTDHFQYSRQGHPNSYALSRHDV", "length": 409 }, "evidence": [ { "id": "F1S9W2", "url": "https://omabrowser.org/oma/group/F1S9W2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22215-1", "protein_name": "Uncharacterized transporter SLY41", "gene_name": "SLY41", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MIQTQSTAIKRRNSVHKNLFDPSLYQIPEPPRGGFQHQKKEYSKETFSNQVFGYDITSLKKRFTQLFPSNIQGYLPEVDLRITIICSIWYVTSSISSNLSKAILRTFNHPIALTELQFLVSAVLCVGFASIVNLFRLPRLKHTKFSKALNSFPDGILPEYLDGNFRSSILHKFLVPSKLVLMTTFPMGIFQFIGHITSHKAVSMIPVSLVHSVKALSPIITVGYYKFFEHRYYNSMTYYTLLLLIFGVMTTCWSTHGSKRASDNKSGSSLIGLLFAFISMIIFVAQNIFAKNILTIRRKVGILPSSSTDDVTSKEGQPSLDKTRFSPLQVDKITILFYCSCIGFSLTLLPFLTGELMHGGSVINDLTLETVALVAIHGIAHFFQAMLAFQLIGLLSSINYSVANIMKRIVVISVALFWETKLNFFQVFGVILTIAGLYGYDKWGLSKKDGRQA", "length": 453 }, "evidence": [ { "id": "F1S9W2", "url": "https://omabrowser.org/oma/group/F1S9W2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q8CD26-1", "protein_name": "Solute carrier family 35 member E1", "gene_name": "Slc35e1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAATAGPGAGAGVPGAGGGGGAREGARVAVLCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPGPHPASGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLVPIISGVLLATVTELSFDVWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSTFLVSSDLAYVSQWPWTLLLLAVSGFCNFAQNVIAFSILNLISPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARRHLLPISTSDLSSREHLRSPVEKPHNGALFPQQGDFQYRNILLTDHFQYSRQGHPNSYALSRHDV", "length": 409 }, "evidence": [ { "id": "F1S9W2", "url": "https://omabrowser.org/oma/group/F1S9W2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96K37-1", "protein_name": "Solute carrier family 35 member E1", "gene_name": "SLC35E1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAAVGAGHGAGGPGAASSSGGAREGARVAALCLLWYALSAGGNVVNKVILSAFPFPVTVSLCHILALCAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTELSFDMWGLVSALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLIMLRNPVTSTNVLGMMTAILGVFLYNKTKYDANQQARKHLLPVTTADLSSKERHRSPLEKPHNGLLFPQHGDYQYGRNNILTDHFQYSRQSYPNSYSLNRYDV", "length": 410 }, "evidence": [ { "id": "F1S9W2", "url": "https://omabrowser.org/oma/group/F1S9W2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VR50-1", "protein_name": "Solute carrier family 35 member E1 homolog", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLGKRTGSRHIAVVLLMCLFWYVISSSNNVIGKMVLNEFPFPMTVTLVQLCSITLYSGPFFNLWRIRKYQDIPRPYYYRLIVPLALGKLLASVTSHISLWKVPVSYAHTVKATMPLFTVVLTRVFFGEKQPTLVYLSLLPIITGVGIATVTEISFDMMGLISALISTMGFSMQNIFSKKVLKDTNIHHLRLLHLLGKLSLFIFLPLWLYMDSFAVFRHTAIKNLDYRVIALLFADGVLNWLQNIIAFSVLSLVTPLTYAVASASKRIFVIAVSLLILGNPVTWVNCVGMTLAIVGVLCYNRAKQLTRGREQPTLPLSQTSYVKYSPLEQQADPYYRGSVNGKLSNGLHRTPGNSLLANGSGMPSGTATRLLFV", "length": 373 }, "evidence": [ { "id": "F1S9W2", "url": "https://omabrowser.org/oma/group/F1S9W2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1S9W2", "url": "https://www.uniprot.org/uniprotkb/F1S9W2" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { 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44899.0 }, "refseq": {}, "gene_names": [ { "name": "HDHD5", "type": "recommended", "evidence": [ { "id": "F1SHR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHR6" } ] } ], "protein_names": [ { "name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "type": "recommended", "evidence": [ { "id": "F1SHR6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHR6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SHR6", "url": "https://www.uniprot.org/uniprotkb/F1SHR6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HDHD5", "url": "https://www.uniprot.org/uniprotkb/F1SHR6", "locus": { "chromosome": "5", "start_pos": 69500285, "end_pos": 69512611, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000764", "url": "https://www.ensembl.org/id/ENSSSCG00000000764" } ] } } ], "crossref": [ { "id": "F1SHR6", "url": "https://alphafold.ebi.ac.uk/entry/F1SHR6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000764", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000764", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07511", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07511", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR006353", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006353", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HDKRMLV", "url": "https://omabrowser.org/oma/group/HDKRMLV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14269", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14269", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14269:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14269:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QYJ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYJ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYJ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYJ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHR6", "url": "https://www.uniprot.org/uniprotkb/F1SHR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHR6-1", "url": "https://www.uniprot.org/uniprotkb/F1SHR6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIGRAAGRACAVRAGGGPWLRSARWWRGGRPGCGGGRLAGRRAGPRGRRAGGQGRRGPSCLPSVQRPPTFGFLLDIDGVLVRGHRIIPAAQEAFHKLLNPEGQLRVPVVFVTNAGNILQHGKAQELSALLGFQVEPDQVILSHSPMRLFSQHHERRMLVSGQGPLVENARALGFKSLVTVDELRAAFPVLDMVDLQRRPKTTVIWASSWVLLLGEPVRWETSLQLIMDVLLSDGNPGTGLATAPYPHLPVLAMAGCFSGRFGHGTFLLCLEAIYRKVTGKELRYEGLMGKPSLLTYQYAEGLLRRQAERRGWAAPIRNLYAVGDNPMSDIYGANLFHQYLQTARSVGAEEGARGPWKQQPSTARSCTSILVCTGVYSPEAPESPGPGLLEAAHVVSDVHEAVQLVLRKEGWAL", "length": 413, "header": "tr|F1SHR6-1|F1SHR6_PIG Isoform 1 of Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Sus scrofa OX=9823 GN=HDHD5 PE=1 SV=3 CANONICAL=F1SHR6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QYJ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SHR6/entry#A0A5G2QYJ0-1", "sequence": { "sequence": "IAVSCGVGHRCGSDPTLLWLWCRGPSCLPSVQRPPTFGFLLDIDGVLVRGHRIIPAAQEAFHKLLNPEGQLRVPVVFVTNAGNILQHGKAQELSALLGFQVEPDQVILSHSPMRLFSQHHERRMLVSGQGPLVENARALGFKSLVTVDELRAAFPVLDMVDLQRRPKTTVIWASSWVLLLGEPVRWETSLQLIMDVLLSDGNPGTGLATAPYPHLPVLAMAGCFSGRFGHGTFLLCLEAIYRKVTGKELRYEGLMGKPSLLTYQYAEGLLRRQAERRGWAAPIRNLYAVGDNPMSDIYGANLFHQYLQTARSVGAEEGARGPWKQQPSTARSCTSILVCTGVYSPEAPESPGPGLLEAAHVVSDVHEAVQLVLRKEGWAL", "length": 380, "header": "tr|A0A5G2QYJ0-1|F1SHR6_PIG Computationally mapped isoform of Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Sus scrofa OX=9823 GN=HDHD5 PE=1 SV=1 CANONICAL=F1SHR6-1" }, "locus": { "chromosome": "5", "start_pos": 69508761, "end_pos": 69500288, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085818.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085818.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063284.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063284.1" } ] } }, { "isoform_ac": "F1SHR6-1", "url": "https://www.uniprot.org/uniprotkb/F1SHR6/entry#F1SHR6-1", "sequence": { "sequence": "MIGRAAGRACAVRAGGGPWLRSARWWRGGRPGCGGGRLAGRRAGPRGRRAGGQGRRGPSCLPSVQRPPTFGFLLDIDGVLVRGHRIIPAAQEAFHKLLNPEGQLRVPVVFVTNAGNILQHGKAQELSALLGFQVEPDQVILSHSPMRLFSQHHERRMLVSGQGPLVENARALGFKSLVTVDELRAAFPVLDMVDLQRRPKTTVIWASSWVLLLGEPVRWETSLQLIMDVLLSDGNPGTGLATAPYPHLPVLAMAGCFSGRFGHGTFLLCLEAIYRKVTGKELRYEGLMGKPSLLTYQYAEGLLRRQAERRGWAAPIRNLYAVGDNPMSDIYGANLFHQYLQTARSVGAEEGARGPWKQQPSTARSCTSILVCTGVYSPEAPESPGPGLLEAAHVVSDVHEAVQLVLRKEGWAL", "length": 413, "header": "tr|F1SHR6-1|F1SHR6_PIG Isoform 1 of Haloacid dehalogenase-like hydrolase domain-containing 5 OS=Sus scrofa OX=9823 GN=HDHD5 PE=1 SV=3 CANONICAL=F1SHR6-1" }, "locus": { "chromosome": "5", "start_pos": 69512611, "end_pos": 69500288, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000828.3", "url": "https://www.ensembl.org/id/ENSSSCT00000000828.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000812.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000812.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QYJ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYJ0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4IJ50-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "hdhd5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAQMFSRLNMLGIGWRGVRFSRKVTNAAVSAQTQRRYSTDVDEQNRHLFGLLFDIDGVLVRGRTPIPAAKQCFRNLVDGDGKYKVPVVFVTNAGNALRQTKAEQLSHLLEVEVSPEQVVLSHSPLRVFTQFHDMCVLVSGQGPVVEVAHNVGFKNVVTIDMLREAYPLLDVVDHHRRPKDTIPQTKDLPHIDAVILFGEPIRWETNLQLIVDVLLTNGRPGNPVTSLHYPHIPVLACNMDLLWMAEAKNPRFGHGMFLVCLESIYKKITGCELKYEALIGKPSVVTYNYAELLIREQAEKLGWTRPVQRLYAIGDNPMADIYGANLYNRYLKAMNRSRTPQVQAQGGVSGQMAADLHCDDAKCSGQVMVGGSFEHCLPEACSSILVCTGVYNRDMPTDPQETLTEHRIFHGHRDFRFDPSLTQPSFIVNDVRDGVELVFQLEGWPLE", "length": 447 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0YEP4-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "HDHD5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MNDIDSGTECTFSMFTDDTKLRGAVNVLQGWDAVQRDQDRLEQWAQPPAFGFLFDIDGVLVRGSQVVPAAREAFRRLSDAGGRLRVPVVFLTNAGNCLRAAKARELSQALGLQVSPEQVILSHSPLRLFSQFHPKCVLVAGQGPVEENARNLGFKHVVTIEALRKAYPLLDMVDQSRRPKELPPPTTGFPTIEGVVLFGEPVRWETSLQLIIDVLLSNGNPGAEPEGIPYPHLPVLACNMDLLWMAEAKMPRFGHGTFLLCLENIYKKVTGRELKYEALIGKPSTVTYRYAEYLIKEQAEKHGWKAPIRRLYAIGDNPMSDVYGANLYNNYLKSAQQNQVEAGVKRIPQAANPQTEDRLAVESCESILVCTGVYRHNADVSRKPEECNMETVFHGHRDFCFDPSLVEASYIVQDVNEAVLLAFEKENWS", "length": 429 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZQB6-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "Hdhd5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVGLPPPRGSARAAADWLLGCARGGGSRVGETRSLRVRATSAMAALARLGVLGPGRCLWKLPVRLSAEFQGYGPRRGYVADRAERSPTFGLLFDIDGVLVRGHRVIPAALEAFSKLVNSQGQLQVPVVFVTNAGNILQRDKAQELSALLECKVDPDQVILSHSPMKLFLQYHNKRMLVSGQGPLVENARALGFQNVVTVDDLRIAFPELDMVDLQRRPKTMRPRSDFPAIEGVLLLGEPVRWETNLQLITDVLLSNGHPGAGLATAPYPHLPVLASNMDLLWMAEASMPRFGHGTFLLCLETIYRKITGHELKYEGLMGKPSILTYRYAEEVIRQQAERRGWAAPIRKLYAIGTCKWQMVERRSNGLMDKRSSGLQQPGAVLPSWCALVYTVLRTQAPKHLLLEGQSSHSTGTETSASVQSS", "length": 422 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N6K5-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "HDHD5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGEAAARWAPGLWRRAVRTAAWLRGRRFASGGTQSPPTFGLLLDIDGVLVRGHQVIPAAQEAFRRLLDPQGQLRVPVVFVTNAGNISQCSKAEELSAQLGFQVEPDQVILSHSPMKLFSQHHDRRMLVSGQGPLVENARALGFKHLVTVDELRAAFPVLDMVDLQRRPKTTLLPRSDFPAIEGVLLLGEPVRWETSLQLITDVLLSDGNPGTGLATAPYPHLPVLASNTDLLWMAEAKMPRFGHGTFLLCLEAIYRKLTGRELCYSGLTGKPSLLTYRYAEGLLARQAARRGWAAPIRSLYAVGDNPMSDIYGANLFHQHLQTQQEGAARSCASILVCTGVYGPQAPSPTVPALGSEGSPFHGHRDFGFRPELLQAAHVVSDLHEAVQLVLRKEGWAL", "length": 401 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54QC3-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAIDKTETTTATTTTTTTTTTTTTNDSSFGIVFDIDGVLMRDGVIIPNATQALKLLEDKETSEPKIPYIFMTNNGGFTEEEKANKISKVLQYNIPSDKVMVAHTPVRPLAEKYKDYDVLLISKTHETSKKLADWYGFKNYKSLQQYIEERPFLCPSKYSTFWTQGVSSEYVIKEAKKQLPIKAIILLEDPIDWGECIQIVSDILQSKDGLLRKDYINRADVQSIDFHICNPDFSYAGEFVIPRYTMGAILECIKLLFKTQTGRDLIYTLYGKPYPLTYQYGKQIISNQISKLGFNDGCILKHIYAIGDNPYSDIKGANNLEHEGWISILVKTGCFKGDTNHPEIPAKYVVDNVYDAVKLILKLEGQ", "length": 366 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q91WM2-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "Hdhd5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAALAGLGVLGAGRHLWKLPVRLSAGLQGCGPRRGYIAGSAERSPTFGLLFDIDGVLVRGHRVIPAALEAFSKLVNSQGQLRVPVVFVTNAGNILQHNKAQELSDLLRCKVDPDQVILSHSPMKLFLQYHSKQMLVSGQGPLVENARALGFQNVVTIDELRLAFPELDMVDLQRRPKTMRLRSDFPAIEGVLLLGEPVRWETNLQLIMDVLLSNGHPGTGLATAPYPHLPVLASNMDLLWMAEAKMPRFGHGTFLLCLETIYRKITGNELKYEGLMGKPSILTYQYAEDVIRQQAERRGWAAPIRKLYAIGDNPMSDVYGANLFHQYLQMANRGEEEQQTGGQQKQRPSATQSCASILVCTGIYSSQDPGSQVPPPGRRELPFHGHRDFSFSPGLLEASHIVHDVNEAVQLVFHQEGWA", "length": 419 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXW7-1", "protein_name": "Haloacid dehalogenase-like hydrolase domain-containing 5", "gene_name": "HDHD5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAWGCVAALGAARGLCWRAARAAAGLQGRPARRCYAVGPAQSPPTFGFLLDIDGVLVRGHRVIPAALKAFRRLVNSQGQLRVPVVFVTNAGNILQHSKAQELSALLGCEVDADQVILSHSPMKLFSEYHEKRMLVSGQGPVMENAQGLGFRNVVTVDELRMAFPLLDMVDLERRLKTTPLPRNDFPRIEGVLLLGEPVRWETSLQLIMDVLLSNGSPGAGLATPPYPHLPVLASNMDLLWMAEAKMPRFGHGTFLLCLETIYQKVTGKELRYEGLMGKPSILTYQYAEDLIRRQAERRGWAAPIRKLYAVGDNPMSDVYGANLFHQYLQKATHDGAPELGAGGTRQQQPSASQSCISILVCTGVYNPRNPQSTEPVLGGGEPPFHGHRDLCFSPGLMEASHVVNDVNEAVQLVFRKEGWALE", "length": 423 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9M169-1", "protein_name": "Hydrolase family protein / HAD-superfamily protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNHLLILARNSLRRRNFNLRPPSRSFSSTISPESNRSSFGIAFDIDGVILLGSSPVGGSPSALRRLYDDSGALKIPFLFLTNGGGLPESKRASEMSHLLGVQVSPLQVIQAHSPFRKLVNRFENELVVAAGKGEPAAVMSNYGFKNVISMDEYASYFDNIDPLAPYKKLMFRQDGHKELRSREDVLSQRVQAAFIVSDPVDWSRDIQVLCDILRTGGLPGKEIGPQPHLYIANDDLDYQTEFPTERLGMGAFRIALESIFNRIHEKPLEYTSFGKPNPFVFKNAEDVLKEIATSPYSSNQGSHHFKTLYMIGDNPKIDIRGARQAGTPWFSILTRTGVFKGKDNHSEFPADLVVDTVEEAVDFILTRESAKQSLLS", "length": 376 }, "evidence": [ { "id": "F1SHR6", "url": "https://omabrowser.org/oma/group/F1SHR6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F1SHR6", "url": "https://www.uniprot.org/uniprotkb/F1SHR6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "glycerophospholipid biosynthetic process", "id": "GO:0046474", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046474", "evidence": [ { "database": "UniProtKB", "id": "F1SHR6", "url": "https://www.uniprot.org/uniprotkb/F1SHR6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SHR6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 413, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SHR6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SHR6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMN4-1", "uniprot_ac": "F1SMN4", "uniprot_id": "F1SMN4_PIG", "mass": { "chemical_mass": 133510.0, "monoisotopic_mass": 133510.0 }, "refseq": {}, "gene_names": [ { "name": "CCDC136", "type": "recommended", "evidence": [ { "id": "F1SMN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMN4" } ] } ], "protein_names": [ { "name": "Coiled-coil domain containing 136", "type": "synonym", "evidence": [ { "id": "F1SMN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMN4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMN4", "url": "https://www.uniprot.org/uniprotkb/F1SMN4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC136", "url": "https://www.uniprot.org/uniprotkb/F1SMN4", "locus": { "chromosome": "18", "start_pos": 19793781, "end_pos": 19824453, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016579", "url": "https://www.ensembl.org/id/ENSSSCG00000016579" } ] } } ], "crossref": [ { "id": "F1SMN4", "url": "https://alphafold.ebi.ac.uk/entry/F1SMN4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016579", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016579", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519523", "url": "https://www.ncbi.nlm.nih.gov/gene/100519523", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR051176", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051176", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR060659", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060659", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "AMEXELR", "url": "https://omabrowser.org/oma/group/AMEXELR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZNY2", "url": "https://www.orthodb.org/?gene=A0A286ZNY2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15715", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15715", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15715:SF26", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15715:SF26", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF28341", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28341", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZNY2", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZNY2-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZNY2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANB0", "url": "https://www.uniprot.org/uniprotkb/A0A287ANB0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANB0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANB0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZL5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZL5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZL5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZL5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R933", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R933", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R933-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R933-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMN3", "url": "https://www.uniprot.org/uniprotkb/F1SMN3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMN3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMN4", "url": "https://www.uniprot.org/uniprotkb/F1SMN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMN4-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRVKIGSAHSKQLQRLGPTVTTLGSYEVSDGCERKKGQRWGSLERRGMQAMEGEVLLPALYEEEEEEEEEEEGEEEDDQVQKGGSGGSLSLSKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLERDKEYELKEIEQELHLARAEIQNLRQAAEDSATDHESDIASLQEDICRMRNELEDMERIRGEYEMEITTLRAEMEMKTSDPSNSLSLSDFSEMQEELQQLRDRYRFLNEEYQALQESNSSLTGQLAELESERTRRATERWLESQTLRSMMSAESQTSEADFLEPDPEMHLLRQQLLGAEEQMHDMQSKCKKLCCELQELQHHHRTSEEEQRRLQRELKCAQNEVLRFQTSHDVTQNEELRTRLCALQQKYDASQDEQNELLKVQLQLQAELRQLKITKSQVVESQSEKELLCRLQKLQLQYQNITCEKDKLLDVQQQLRDNLQCHEAEVQHLKGVVASFQDSREKYTEMRAQLQEVKRLHQTSRDALEQQKHMYDQLEQDFLLCQEELQQLKTTQAIQEDKGQCANKCDTLLFRLTELQERYKASQKEMGQLQMQQCELLEEQRRMQEEQGQLQEELHRLTFPLPKSGLFHKSQELLTKLQNLCELQLLYQGMQEEQKKLIQNQECVIKEQLELHSALQHFKESGFREVLEGPENSRSPKSSKCGNSSKSKVIVAQIEVLQELYEASQTEQERLHKEQERLLEERKRLQADLQLCLEEMQLLQAQSPSLKMSLESYKKSYGSTTASREDKSCDIDDNESYHKSYSSSSQASEESFLKSYDSSSSNTRESWGRSYRSSSSSTACKRSYGSSSSSDVFHKSYVSSSADNELAEPEDVECLEVTVAKVLVKLQGVQGLYQLSQEEHSLLQERMKKLLDKQKELKEELDACEKEFKECMECFEKPAEKPATSQNDKNEIRDLQAKLRELQLQYQASMDEQGRLLAVQEQLEGQLQCCQEELRQLKEKRSSAAKETKGKNGNKNTNKNANGVTHKKVAKPNLENSEGCFEAGKVSRNRSSQTSRRLKEILGGRIIPASIPTRGSMCQEASGISNVSRIVHPSGDLVPPLPGKAGESGMQPTQTWHDSFSAGRLFRSVQCGFLHPLFFLGS", "length": 1160, "header": "tr|F1SMN4-1|F1SMN4_PIG Isoform 1 of Coiled-coil domain containing 136 OS=Sus scrofa OX=9823 GN=CCDC136 PE=1 SV=2 CANONICAL=F1SMN4-1" }, "isoforms": [ { "isoform_ac": "A0A286ZNY2-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN4/entry#A0A286ZNY2-1", "sequence": { "sequence": "MEAGAGAGAGAAGWSCPGPGPTVTTLGSYEVSDGCERKKGQRWGSLERRGMQAMEGEVLLPALYEEEEEEEEEEEGEEEDDQVQKGGSGGSLSLSKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLERDKEYELKEIEQELHLARAEIQNLRQAAEDSATDHESDIASLQEDICRMRNELEDMERIRGEYEMEITTLRAEMEMKTSDPSNSLSLSDFSEMQEELQQLRDRYRFLNEEYQALQESNSSLTGQLAELESERTRRATERWLESQTLRSMMSAESQTSEADFLEPDPEMHLLRQQLLGAEEQMHDMQSKCKKLCCELQELQHHHRTSEEEQRRLQRELKCAQNEVLRFQTSHDVTQPSPAPDPPIFSLPLVGLVVISALLWCWWAETSS", "length": 446, "header": "tr|A0A286ZNY2-1|A0A286ZNY2_PIG Computationally mapped isoform of Coiled-coil domain containing 136 OS=Sus scrofa OX=9823 GN=CCDC136 PE=1 SV=1 CANONICAL=F1SMN4-1" }, "locus": { "chromosome": "18", "start_pos": 19823691, "end_pos": 19798323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041230.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041230.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033326.1", "url": "https://www.ensembl.org/id/ENSSSCP00000033326.1" } ] } }, { "isoform_ac": "A0A287ANB0-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN4/entry#A0A287ANB0-1", "sequence": { "sequence": "MEAGAGAGAGAAGWSCPGPGPTVTTLGSYEVSDGCERKKGQRWGSLERRGMQAMEGEVLLPALYEEEEEEEEEEEGEEEDDQVQKGGSGGSLSLSKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLERDKEYELKEIEQELHLARAEIQNLRQAAEDSATDHESDIASLQEDICRMRNELEDMERIRGEYEMEITTLRAEMEMKTSDPSNSLSLSDFSEMQEELQQLRDRYRFLNEEYQALQESNSSLTGQLAELESERTRRATERWLESQTLRSMMSAESQTSEADFLEPDPEMHLLRQQLLGAEEQMHDMQSKCKKLCCELQELQHHHRTSEEEQRRLQRELKCAQNEVLRFQTSHDVTQYTEMRAQLQEVKRLHQTSRDALEQQKHMYDQLEQDFLLCQEELQQLKTTQAIQEDKGQCANKPSPAPDPPIFSLPLVGLVVISALLWCWWAETSS", "length": 508, "header": "tr|A0A287ANB0-1|A0A287ANB0_PIG Computationally mapped isoform of Coiled-coil domain containing 136 OS=Sus scrofa OX=9823 GN=CCDC136 PE=1 SV=1 CANONICAL=F1SMN4-1" }, "locus": { "chromosome": "18", "start_pos": 19823691, "end_pos": 19798323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063133.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063133.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045389.1", "url": "https://www.ensembl.org/id/ENSSSCP00000045389.1" } ] } }, { "isoform_ac": "A0A5G2QZL5-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN4/entry#A0A5G2QZL5-1", "sequence": { "sequence": "LPALYEEEEEEEEEEEGEEEDDQVQKGGSGGSLSLSKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLERDKEYELKEIEQELHLARAEIQNLRQAAEDSATDHESDIASLQEDICRMRNELEDMERIRGEYEMEITTLRAEMEMKTSDPSNSLSLSDFSEMQEELQQLRDRYRFLNEEYQALQESNSSLTGQLAELESERTRRATERWLESQTLRSMMSAESQTSEADFLEPDPEMHLLRQQLLGAEEQMHDMQSKCKKLCCELQELQHHHRTSEEEQRRLQRELKCAQNEVLRFQTSHDVTQNEELRTRLCALQQKYDASQDEQNELLKVQLQLQAELRQLKITKSQVVESQSEKELLCRLQKLQLQYQNITCEKDKLLDVQQQLRDNLQCHEAEVQHLKGVVASFQDSREKYTEMRAQLQEVKRLHQTSRDALEQQKHMYDQLEQDFLLCQEELQQLKTTQAIQEDKGQCANKCDTLLFRLTELQERYKASQKEMGQLQMQQCELLEEQRRMQEEQGQLQEELHRLTFPLPKSGLFHKSQELLTKLQNLCELQLLYQGMQEEQKKLIQNQECVIKEQLELHSALQHFKESGFREVLEGPENSRSPKSSKCGNSSKSKVIVAQIEVLQELYEASQTEQERLHKEQERLLEERKRLQADLQLCLEEMQLLQAQSPSLKMSLESYKKSYGSTTASREDKSCDIDDNESYHKSYSSSSQASEESFLKSYDSSSSNTRESWGRSYRSSSSSTACKRSYGSSSSSDVFHKSYVSSSADNELAEPEDVECLEVTVAKVLVKLQGVQGLYQLSQEEHSLLQERMKKLLDKQKELKEELDACEKEFKECMECFEKPAEKPATSQNDKNEIRDLQAKLRELQLQYQASMDEQGRLLAVQEQLEGQLQCCQEELRQLKEKRSSAAKETKGKNGNKNTNKNANGVTHKKVAKPNLENSEGCFEAGKVSRNRSSQTSRRLKEILGGRIIPASIPTRGSMCQEASGISNVSRIVHPSGDLVPPLPGKAGESGMQPTQTWHDSFSAGRLFRSVQCGFLHPLFFLGSHAQEKD", "length": 1110, "header": "tr|A0A5G2QZL5-1|F1SMN4_PIG Computationally mapped isoform of Coiled-coil domain containing 136 OS=Sus scrofa OX=9823 GN=CCDC136 PE=1 SV=2 CANONICAL=F1SMN4-1" }, "locus": { "chromosome": "18", "start_pos": 19821172, "end_pos": 19801108, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071847.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071847.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070326.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070326.2" } ] } }, { "isoform_ac": "A0A5G2R933-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN4/entry#A0A5G2R933-1", "sequence": { "sequence": "MEAGAGAGAGAAGWSCPGPGPTVTTLGSYEVSDGCERKKGQRWGSLERRGMQAMEGEVLLPALYEEEEEEEEEEEGEEEDDQVQKGGSGGSLSLSKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLERDKEYELKEIEQELHLARAEIQNLRQAAEDSATDHESDIASLQEDICRMRNELEDMERIRGEYEMEITTLRAEMEMKTSDPSNSLSLSDFSEMQEELQQLRDRYRFLNEEYQALQESNSSLTGQLAELESERTRRATERWLESQTLRSMMSAESQTSEADFLEPDPEMHLLRQQLLGAEEQMHDMQSKCKKLCCELQELQHHHRTSEEEQRRLQRELKCAQNEVLRFQTSHDVTQELLCRLQKLQLQYQNITCEKDKLLDVQQQLRDNLQCHEAEVQHLKGVVASFQDSREKYTEMRAQLQEVKRLHQTSRDALEQQKHMYDQLEQDFLLCQEELQQLKTTQAIQEDKGQCANKPSPAPDPPIFSLPLVGLVVISALLWCWWAETSS", "length": 565, "header": "tr|A0A5G2R933-1|A0A5G2R933_PIG Computationally mapped isoform of Coiled-coil domain containing 136 OS=Sus scrofa OX=9823 GN=CCDC136 PE=1 SV=2 CANONICAL=F1SMN4-1" }, "locus": { "chromosome": "18", "start_pos": 19823691, "end_pos": 19798323, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076483.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076483.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072834.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072834.2" } ] } }, { "isoform_ac": "F1SMN3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN4/entry#F1SMN3-1", "sequence": { "sequence": "HLCPGTAWEVLLPALYEEEEEEEEEEEGEEEDDQVQKGGSGGSLSLSKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLERDKEYELKEIEQELHLARAEIQNLRQAAEDSATDHESDIASLQEDICRMRNELEDMERIRGEYEMEITTLRAEMEMKTSDPSNSLSLSDFSEMQEELQQLRDRYRFLNEEYQALQESNSSLTGQLAELESERTRRATERWLESQTLRSMMSAESQTSEADFLEPDPEMHLLRQQLLGAEEQMHDMQSKCKKLCCELQELQHHHRTSEEEQRRLQRELKCAQNEVLRFQTSHDVTQNEELRTRLCALQQKYDASQDEQNELLKVQLQLQAELRQLKITKSQVVESQSEKELLCRLQKLQLQYQNITCEKDKLLDVQQQLRDNLQCHEAEVQHLKGVVASFQDSREKYTEMRAQLQEVKRLHQTSRDALEQQKHMYDQLEQDFLLCQEELQQLKTTQAIQEDKGQCANKCDTLLFRLTELQERYKASQKEMGQLQMQQCELLEEQRRMQEEQGQLQEELHRLTFPLPKSGLFHKSQELLTKLQNLCELQLLYQGMQEEQKKLIQNQECVIKEQLELHSALQHFKESGFREVLEGPENSRSPKSSKCGNSSKSKVIVAQIEVLQELYEASQTEQERLHKEQERLLEERKRLQADLQLCLEEMQLLQAQSPSLKMSLESYKKSYGSTTASREDKSCDIDDNESYHKSYSSSSQASEESFLKSYDSSSSNTRESWGRSYRSSSSSTACKRSYGSSSSSDVFHKSYVSSSADNELAEPEDVECLEVTVAKVLVKLQGVQGLYQLSQEEHSLLQERMKKLLDKQKELKEELDACEKEFKECMECFEKPAEKPATSQNDKNEIRDLQAKLRELQLQYQASMDEQGRLLAVQEQLEGQLQCCQEELRQLKEKRSSAAKETKGKNGNKNTNKNANGVTHKKVAKPNLENSEGCFEAGKVSRNRSSQTSRRLKEILGGRIIPASIPTRGSMCQEASGISNVSRIVHPSGDLVPPLPGKAGESGMQPTQTWHDSFSAGRLFRSVQCGFLHPLFFLGSHAQEKD", "length": 1121, "header": "tr|F1SMN3-1|F1SMN3_PIG Computationally mapped isoform of Coiled-coil domain containing 136 OS=Sus scrofa OX=9823 GN=CCDC136 PE=1 SV=4 CANONICAL=F1SMN4-1" }, "locus": { "chromosome": "18", "start_pos": 19821277, "end_pos": 19801108, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018050.4", "url": "https://www.ensembl.org/id/ENSSSCT00000018050.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017564.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017564.4" } ] } }, { "isoform_ac": "F1SMN4-1", "url": "https://www.uniprot.org/uniprotkb/F1SMN4/entry#F1SMN4-1", "sequence": { "sequence": "MRVKIGSAHSKQLQRLGPTVTTLGSYEVSDGCERKKGQRWGSLERRGMQAMEGEVLLPALYEEEEEEEEEEEGEEEDDQVQKGGSGGSLSLSKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLERDKEYELKEIEQELHLARAEIQNLRQAAEDSATDHESDIASLQEDICRMRNELEDMERIRGEYEMEITTLRAEMEMKTSDPSNSLSLSDFSEMQEELQQLRDRYRFLNEEYQALQESNSSLTGQLAELESERTRRATERWLESQTLRSMMSAESQTSEADFLEPDPEMHLLRQQLLGAEEQMHDMQSKCKKLCCELQELQHHHRTSEEEQRRLQRELKCAQNEVLRFQTSHDVTQNEELRTRLCALQQKYDASQDEQNELLKVQLQLQAELRQLKITKSQVVESQSEKELLCRLQKLQLQYQNITCEKDKLLDVQQQLRDNLQCHEAEVQHLKGVVASFQDSREKYTEMRAQLQEVKRLHQTSRDALEQQKHMYDQLEQDFLLCQEELQQLKTTQAIQEDKGQCANKCDTLLFRLTELQERYKASQKEMGQLQMQQCELLEEQRRMQEEQGQLQEELHRLTFPLPKSGLFHKSQELLTKLQNLCELQLLYQGMQEEQKKLIQNQECVIKEQLELHSALQHFKESGFREVLEGPENSRSPKSSKCGNSSKSKVIVAQIEVLQELYEASQTEQERLHKEQERLLEERKRLQADLQLCLEEMQLLQAQSPSLKMSLESYKKSYGSTTASREDKSCDIDDNESYHKSYSSSSQASEESFLKSYDSSSSNTRESWGRSYRSSSSSTACKRSYGSSSSSDVFHKSYVSSSADNELAEPEDVECLEVTVAKVLVKLQGVQGLYQLSQEEHSLLQERMKKLLDKQKELKEELDACEKEFKECMECFEKPAEKPATSQNDKNEIRDLQAKLRELQLQYQASMDEQGRLLAVQEQLEGQLQCCQEELRQLKEKRSSAAKETKGKNGNKNTNKNANGVTHKKVAKPNLENSEGCFEAGKVSRNRSSQTSRRLKEILGGRIIPASIPTRGSMCQEASGISNVSRIVHPSGDLVPPLPGKAGESGMQPTQTWHDSFSAGRLFRSVQCGFLHPLFFLGS", "length": 1160, "header": "tr|F1SMN4-1|F1SMN4_PIG Isoform 1 of Coiled-coil domain containing 136 OS=Sus scrofa OX=9823 GN=CCDC136 PE=1 SV=2 CANONICAL=F1SMN4-1" }, "locus": { "chromosome": "18", "start_pos": 19824453, "end_pos": 19801126, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018049.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018049.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017563.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017563.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QZL5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZL5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D4AAR7-1", "protein_name": "Coiled-coil domain containing 136", "gene_name": "Ccdc136", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLGAGTGEGFRAAAGGHSRQVARPGPALSARPLSSLRTGLPVPGPEAAASAREAAAATGAAMEAGGGAGAGAAGWSCPGPGPTVTTLGSYEVSEGCERKKGQRWGSLERRGMQAMEGEVLLPALYEEEEEEEEEEEEEVEEEDQVQKEGSLGSLSVGKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDCLELQGLLEDERLASAQQAEVFTKQIQQLQGELQHLREEISLLEHEKESELKEIEQELHLAQAEIHNLRQAAADSATEHESDIASLQDDLCRLQNELDDMERIRGDYEMEIASLRAEMELKASGPSDLSISDFSGIQDELHQLRERYHFLNEEYQALRESNSSLTGQLAELESDRTRRATERWLESHMLKNMMSSESQTSELDFPEPDPVMQLLRQQLLGAEEQMHDMQDKCKNLCCELEELQHHRRTSEEEQKRLQRELKCAQNEVLRFQTCHTTQNEELKSRLCALQQKYDTSQDEHSELLKVQMQLQSELQQLKLVRCTPVESQSEKELMCRLQKLQAQHQCSVNEKEQLLEVQHHLHDKLRCHESEMHRLREMVDCLRERNEKNSGIHLQLQEMKGLYQCSRDELERQKHMYDQLEQDFMLCQQELTELKSSHSFCEDSGNRPNKCDALLARLTELQEKFKASQLEIGHLQMEQCELLEDQRRLQEEQGQLQEELHRLTFPQPKCGLLQKSQELLAKLQDLCEMQLLYQNMQDQQRKLIQNQECVLREQLEAHKHLRGFKESNFQEVLANPQDAQGPKSSSCENKFKVFMEQLQALQVLYDTSQRQQEVLQQEHGRLMEERKRLQAELQLCMEEMQLLQTQSPTMKGNFDYCKKNTGSTALSTESFHRSYDSTIDECEGYQKSYVSSQPSKETFLKSYDSNMSCSEAFQKSYCSSNTTVAYKKSYISGSSCETLHKSYASSSTDEEPADPEDLEHFEETVAKVLTKLQAVKALYQVSQEEHCQLQERMSKLLAKQKELKEELEYCEKELKECMENFEKPATPQNDKCEIKELQTKLRELQLQYQASMDEQGRLLAVQEQLEGQLQCCQEELRQLKENRSSFSSEARGKHVLKNMNKNANGVRDQVGKACSEDLENDFEDEKNLEVMLYYKASQKKLDELTKEEKEMDELRKKEKEKQAKKELCKLATKAADPGAEPESTEGEDENFEEYTEGEDESCETAEEGNPLKLSESKKNMFGMWKPMVFLAIAAVALYVLPNMRPQEPEFYMN", "length": 1249 }, "evidence": [ { "id": "F1SMN4", "url": "https://omabrowser.org/oma/group/F1SMN4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q96JN2-1", "protein_name": "Coiled-coil domain-containing protein 136", "gene_name": "CCDC136", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQAMEGEVLLPALYEEEEEEEEEEEEVEEEEEQVQKGGSVGSLSVNKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLEHEKESELKEIEQELHLAQAEIQSLRQAAEDSATEHESDIASLQEDLCRMQNELEDMERIRGDYEMEIASLRAEMEMKSSEPSGSLGLSDYSGLQEELQELRERYHFLNEEYRALQESNSSLTGQLADLESERTQRATERWLQSQTLSMTSAESQTSEMDFLEPDPEMQLLRQQLRDAEEQMHGMKNKCQELCCELEELQHHRQVSEEEQRRLQRELKCAQNEVLRFQTSHSVTQNEELKSRLCTLQKKYDTSQDEQNELLKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQEELQCHEAELQHLRDTVASFKESNEKDTETHAQLQEMKQLYQASKDELERQKHMYDQLEQDLLLCQLELKELKASHPIPEDKGKCANKCDTLLSRLTELQEKYKASQKEMGQLQMEQCELLEDQRRMQEEQGQLQEELHRLTLPLPKSGLLLKSQELLTKLEDLCELQLLYQGMQEEQKKLIQNQDCVLKEQLEIHEELRRFKESHFQEVLENPDDSKLAKSSKCNRNKQSKLLMEQMQALQVMYDAGQAKQELLQQEQGRLLEERKRLQADLQLCLEEMQLLQVQSPSIKMSLESYGKSYGSMVPSNENCRKTYDTTVDDNESYYKSYTSTQTSSKSFLKSYDSSTSASEAYGKSYCTTSNSSITYKKSYGSTSSSDTCQKSFVSSCTDEEPAEPEDMERFEEMVVKVLIKLQAVQAMYQISQEEHSQLQEQMEKLLAKQKDLKEELDACEREFKECMECLEKPMAPQNDKNEIKELQTKLRELQLQYQASMDEQGRLLVVQEQLEGQLQCCQEELRQLREKRPSVVKEARGKNANKNMNKNANGVKMKKVTKPCSDTSESDLETRKSLEVVLYYKASQRKLDGLAKEEEKKEEMEEEKKQVKEEAKEQCGDELVAEPADPEEAKSTEDQEENEEDKEEEEKEEDSEEEEDDADSSLESPEENNPLRLSESKKSSPTPNPPIFSLPLVGLVVISALLWCWWAETSS", "length": 1154 }, "evidence": [ { "id": "F1SMN4", "url": "https://omabrowser.org/oma/group/F1SMN4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "single fertilization", "id": "GO:0007338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007338", "evidence": [ { "database": "UniProtKB", "id": "F1SMN4", "url": "https://www.uniprot.org/uniprotkb/F1SMN4" } ], "pmid": "" }, { "name": "acrosome assembly", "id": "GO:0001675", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001675", "evidence": [ { "database": "UniProtKB", "id": "F1SMN4", "url": "https://www.uniprot.org/uniprotkb/F1SMN4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "acrosomal membrane", "id": "GO:0002080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002080", "evidence": [ { "database": "UniProtKB", "id": "F1SMN4", "url": "https://www.uniprot.org/uniprotkb/F1SMN4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1067, "end_pos": 1069, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1104, "end_pos": 1106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 293, "end_pos": 295, "annotation": "n_glycosylation_sequon" }, { "start_pos": 478, "end_pos": 480, "annotation": "n_glycosylation_sequon" }, { "start_pos": 721, "end_pos": 723, "annotation": "n_glycosylation_sequon" }, { "start_pos": 812, "end_pos": 814, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SMN4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1160, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SMN4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SMN4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMN4" }, { "id": "PF28341", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28341" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CCDC136/SLMAP coiled-coil", "eco_id": "ECO_0000259", "start_pos": 17, "end_pos": 1063, "start_aa": "Gly", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1067, "end_pos": 1069 }, { "start_pos": 1104, "end_pos": 1106 }, { "start_pos": 293, "end_pos": 295 }, { "start_pos": 478, "end_pos": 480 }, { "start_pos": 721, "end_pos": 723 }, { "start_pos": 812, "end_pos": 814 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBJ1-1", "uniprot_ac": "F1SBJ1", "uniprot_id": "F1SBJ1_PIG", "mass": { "chemical_mass": 78242.0, "monoisotopic_mass": 78242.0 }, "refseq": {}, "gene_names": [ { "name": "SEL1L2", "type": "recommended", "evidence": [ { "id": "F1SBJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1" } ] } ], "protein_names": [ { "name": "SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase", "type": "synonym", "evidence": [ { "id": "F1SBJ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBJ1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SEL1L2", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1", "locus": { "chromosome": "17", "start_pos": 22516558, "end_pos": 22627626, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007078", "url": "https://www.ensembl.org/id/ENSSSCG00000007078" } ] } } ], "crossref": [ { "id": "F1SBJ1", "url": "https://alphafold.ebi.ac.uk/entry/F1SBJ1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007078", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007078", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR006597", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006597", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050767", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050767", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11102", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11102", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11102:SF53", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11102:SF53", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08238", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08238", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R123", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R123", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R123-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R123-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBJ1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBJ1-1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKPWSLLIEILVILGVTVTNIEAERHNKDQKERNITTQVSVKQVKHFLSNILERKKSINVIKKKENLLEEKSQHTLRIRGIRNKDLWKRNKNYLKNQERKNFTDEGDQLFKKGVKILQQSKSQKQKAEAYILFAKAADMGNLKAMEKMADALLFGNFGMQNITAAIQLYESLAKEGSYKAQNALGFLSSYGIGMEYNQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVALNHYKKVADYIADKLEKSEGIPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALYYFLKAAKAGSANAMAFIGKMYLEGNAAAPQNNATAFKYFSMAANKGNAIGLHGLGLLYFYGKGVPVNYAEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGHWAEKFLSAYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKAKILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAADKYQSAQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQTSPDAHIPVFFALMKLETVHLLRDILFFNFTMRWKWMKLDNTLGPYWDLFVIGLIVAVLIFLLRNRYG", "length": 687, "header": "tr|F1SBJ1-1|F1SBJ1_PIG Isoform 1 of SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase OS=Sus scrofa OX=9823 GN=SEL1L2 PE=3 SV=4 CANONICAL=F1SBJ1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R123-1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1/entry#A0A5G2R123-1", "sequence": { "sequence": "MKPWSLLIEILVILGVTVTNIEAERHNKDQKERNITTQVSVKQVKHFLSNILERKKSINVIKKKENLLEEKSQHTLRIRGIRNKDLWKRNKNYLKNQERKNFTDEGDQLFKKGVKILQQSKSQKQKAEAYILFAKAADMGNLKAMEKMADALLFGNFGMQNITAAIQLYESLAKEGSYKAQNALGFLSSYGIGMEYNQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVALNHYKKVADYIADKLEKSEGIPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALYYFLKAAKAGSANAMAFIGKMYLEGNAAAPQNNATAFKYFSMAANKGNAIGLHGLGLLYFYGKGVPVNYAEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVEKRLKFLKKRRCTQWHFSCGIELLFKDIHLARRLYDMAAQTSPDAHIPVFFALMKLETVHLLRDILFFNFTMRWKWMKLDNTLGPYWDLFVIGLIVAVLIFLLRNRYG", "length": 574, "header": "tr|A0A5G2R123-1|F1SBJ1_PIG Computationally mapped isoform of SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase OS=Sus scrofa OX=9823 GN=SEL1L2 PE=3 SV=1 CANONICAL=F1SBJ1-1" }, "locus": { "chromosome": "17", "start_pos": 22627339, "end_pos": 22517562, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084218.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084218.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070813.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070813.1" } ] } }, { "isoform_ac": "F1SBJ1-1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1/entry#F1SBJ1-1", "sequence": { "sequence": "MKPWSLLIEILVILGVTVTNIEAERHNKDQKERNITTQVSVKQVKHFLSNILERKKSINVIKKKENLLEEKSQHTLRIRGIRNKDLWKRNKNYLKNQERKNFTDEGDQLFKKGVKILQQSKSQKQKAEAYILFAKAADMGNLKAMEKMADALLFGNFGMQNITAAIQLYESLAKEGSYKAQNALGFLSSYGIGMEYNQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVALNHYKKVADYIADKLEKSEGIPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALYYFLKAAKAGSANAMAFIGKMYLEGNAAAPQNNATAFKYFSMAANKGNAIGLHGLGLLYFYGKGVPVNYAEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGHWAEKFLSAYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKAKILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAADKYQSAQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQTSPDAHIPVFFALMKLETVHLLRDILFFNFTMRWKWMKLDNTLGPYWDLFVIGLIVAVLIFLLRNRYG", "length": 687, "header": "tr|F1SBJ1-1|F1SBJ1_PIG Isoform 1 of SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase OS=Sus scrofa OX=9823 GN=SEL1L2 PE=3 SV=4 CANONICAL=F1SBJ1-1" }, "locus": { "chromosome": "17", "start_pos": 22627339, "end_pos": 22517562, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007749.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007749.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007540.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007540.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R123", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R123" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "ERAD pathway", "id": "GO:0036503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036503", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 161, "end_pos": 163, "annotation": "n_glycosylation_sequon" }, { "start_pos": 271, "end_pos": 273, "annotation": "n_glycosylation_sequon" }, { "start_pos": 34, "end_pos": 36, "annotation": "n_glycosylation_sequon" }, { "start_pos": 354, "end_pos": 356, "annotation": "n_glycosylation_sequon" }, { "start_pos": 648, "end_pos": 650, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SBJ1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 687, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SBJ1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SBJ1" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 101, "end_pos": 103 }, { "start_pos": 161, "end_pos": 163 }, { "start_pos": 271, "end_pos": 273 }, { "start_pos": 34, "end_pos": 36 }, { "start_pos": 354, "end_pos": 356 }, { "start_pos": 648, "end_pos": 650 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDX5-1", "uniprot_ac": "F1SDX5", "uniprot_id": "F1SDX5_PIG", "mass": { "chemical_mass": 130908.0, "monoisotopic_mass": 130908.0 }, "refseq": { "ac": "XP_020933336", "name": "uncharacterized protein KIAA1755 homolog isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933336" }, "gene_names": [ { "name": "KIAA1755", "type": "recommended", "evidence": [ { "id": "F1SDX5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDX5" } ] }, { "name": "KIAA1755", "type": "synonym", "evidence": [ { "id": "XP_020933336", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933336" } ] } ], "protein_names": [ { "name": "KIAA1755", "type": "synonym", "evidence": [ { "id": "F1SDX5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDX5/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein KIAA1755 homolog isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020933336", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933336" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDX5", "url": "https://www.uniprot.org/uniprotkb/F1SDX5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KIAA1755", "url": "https://www.uniprot.org/uniprotkb/F1SDX5", "locus": { "chromosome": "17", "start_pos": 41275505, "end_pos": 41329143, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007344", "url": "https://www.ensembl.org/id/ENSSSCG00000007344" } ] } } ], "crossref": [ { "id": "F1SDX5", "url": "https://alphafold.ebi.ac.uk/entry/F1SDX5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007344", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007344", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100516472", "url": "https://www.ncbi.nlm.nih.gov/gene/100516472", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR052231", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052231", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR060650", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060650", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR060651", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060651", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EMGTEDW", "url": "https://omabrowser.org/oma/group/EMGTEDW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45845", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45845", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45845:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45845:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF27628", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27628", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27632", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27632", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020933336", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933336", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AT46", "url": "https://www.uniprot.org/uniprotkb/A0A287AT46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AT46-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AT46-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R187", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R187", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R187-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R187-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDX5", "url": "https://www.uniprot.org/uniprotkb/F1SDX5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDX5-1", "url": "https://www.uniprot.org/uniprotkb/F1SDX5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSPSLDTAIQHALAGLYPPFEATAPTILGQVFRLLDSDFQGDGLSFLLDFLIPAKRLCEQVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIMIKCLSVDLRTVDTKPVPMSAYAMLFTQAWLEAINSDFEGGPLHNCLVASEDGVVSVPWTKIASPEFVDDRPQTENVLSPAWGSLQLEALDLSSSQELHQARSPGSQVLLTRSLAKGKSRTRGNKYPGLIKVEPAGPGEVAFRMDDVTSQDLEGDYVALVDFSQESRGGSPIQEVGTSNGYPLGALEELAGTKEIPFCERMLPLSWAKGGSSLEKWACEKPESLEEELCVWGLRRKPNDKVPTQDSEHQPQDPYLHVLVNPLHCVSGLGAGVSEEPAATKTQRLLGNPESMVQLRPKPKQASSPRLRPASPCPAPAPENRMEDRTKQGRGRLPKPVTSPGQNTSSCRSPTSRPKFSFLKGLRQAAVPTEKASLQPDGPWKILCSLYSPKPSRDRCLGKAGTTQTKTSGPDADSDPLTEEKTGFPEASADPPEKSPALDEEPPGLEPRIGALSVEILHSRIASLPGGRDRAGRPLLLVSTSNGLWEAPWCTASEVAKLFSCLCTIPRPEDKTQGLAVVIDARKQPPHPGLVSALQATQALIPTSIGALLFLGEKEAALQLEALPGIQVEVLPSLKALSHHVDPSQLPTALEGPFPYCPSEWVQFFQKLDPFLADLRRASSLLKASIKELEKGDPPGGVQEAARCLSKSKELMEAVLRDPGLLSLQREGGATLAQLQQEGSRLNFNPDVRSHLAEATALYSLVDEQLHVLVTVSNHLLRRLGLRVRLGRLEAAIHQVSNWMEQEGSQYLQVLTPKDGSLETVEKNHAMFEDFFLQAAAQYRRGLELSKQAAQLEAAARGAGEAGGSELPELAAFAFTQRAFQAKLTHFYMAAERQRTDLETLLHLHRFCKKVTWFHMDCQDLMTQLRLGKAQRASPGDQRRLHRYLQRLASEFPAEKLTAMGLQVASLSQEGLGQDLWEEARERHEEIQTLLKKALARCPCPTGPPVLPARLEVREAAAKRQGPNGEVTPEGGRGLPLPDSPGLDRSAKSYWPPWAPRRGQNRNVQAAPPPQEAGQALEADGGKSPHGPLDPAPEGFLTTLFSWQRLPRQSRGPHAAGGSFSSEGTGSLTSLEDSPHTSPPASL", "length": 1201, "header": "tr|F1SDX5-1|F1SDX5_PIG Isoform 1 of KIAA1755 OS=Sus scrofa OX=9823 GN=KIAA1755 PE=4 SV=2 CANONICAL=F1SDX5-1" }, "isoforms": [ { "isoform_ac": "A0A287AT46-1", "url": "https://www.uniprot.org/uniprotkb/F1SDX5/entry#A0A287AT46-1", "sequence": { "sequence": "MAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIMIKCLSVDLRTVDTKPVPMSAYAMLFTQAWLEAINSDFEGGPLHNCLVASEDGVVSVPWTKIASPEFVDDRPQTENVLSPAWGSLQLEALDLSSSQELHQARSPGSQVLLTRSLAKGKSRTRGNKYPGLIKVEPAGPGEVAFRMDDVTSQDLEGDYVALVDFSQESRGGSPIQEVGTSNGYPLGALEELAGTKEIPFCERMLPLSWAKGGSSLEKWACEKPESLEEELCVWGLRRKPNDKVPTQDSEHQPQDPYLHVLVNPLHCVSGLGAGVSEEPAATKTQRLLGNPESMVQLRPKPKQASSPRLRPASPCPAPAPENRMEDRTKQGRGRLPKPVTSPGQNTSSCRSPTSRPKFSFLKGLRQAAVPTEKASLQPDGPWKILCSLYSPKPSRDRCLGKAGTTQTKTSGPDADSDPLTEEKTGFPEASADPPEKSPALDEEPPGLEPRIGALSVEILHSRIASLPGGRDRAGRPLLLVSTSNGLWEAPWCTASEVAKLFSCLCTIPRPEDKTQGLAVVIDARKQPPHPGLVSALQATQALIPTSIGALLFLGEKEAALQLEALPGIQVEVLPSLKALSHHVDPSQLPTALEGPFPYCPSEWVQFFQKLDPFLADLRRASSLLKASIKELEKGDPPGGVQEAARCLSKSKELMEAVLRDPGLLSLQREGGATLAQLQQEGSRLNFNPDVRSHLAEATALYSLVDEQLHVLVTVSNHLLRRLGLRVRLGRLEAAIHQVSNWMEQEGSQYLQVLTPKDGSLETVEKNHAMFEDFFLQAAAQYRRGLELSKQAAQLEAAARGAGEAGGSELPELAAFAFTQRAFQAKLTHFYMAAERQRTDLETLLHLHRFCKKVTWFHMDCQDLMTQLRLGKAQRASPGDQRRLHRYLQRLASEFPAEKLTAMGLQVASLSQEGLGQDLWEEARERHEEIQTLLKKALARCPCPTGPPVLPARLEVREAAAKRQGPNGEVTPEGGRGLPLPDSPGLDRSAKSYWPPWAPRRGQNRNVQAAPPPQEAGQALEADGGKSPHGPLDPAPEGFLTTLFSWQRLPRQSRGPHAAGGSFSSEGTGSLTSLEDSPHTSPPASL", "length": 1135, "header": "tr|A0A287AT46-1|A0A287AT46_PIG Computationally mapped isoform of KIAA1755 OS=Sus scrofa OX=9823 GN=KIAA1755 PE=4 SV=1 CANONICAL=F1SDX5-1" }, "locus": { "chromosome": "17", "start_pos": 41321036, "end_pos": 41276061, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055768.1", "url": "https://www.ensembl.org/id/ENSSSCT00000055768.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047129.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047129.1" } ] } }, { "isoform_ac": "A0A5G2R187-1", "url": "https://www.uniprot.org/uniprotkb/F1SDX5/entry#A0A5G2R187-1", "sequence": { "sequence": "MDSPSLDTAIQHALAGLYPPFEATAPTILGQVFRLLDSDFQGDGLSFLLDFLIPAKRLCEQVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIMIKCLSVDLRTVDTKPVPMSAYAMLFTQAWLEAINSDFEGGPLHNCLVASEDGVVSVPWTKIASPEFVDDRPQTENVLSPAWGSLQLEALDLSSSQELHQARSPGSQVLLTRSLAKGKSRTRGNKYPGLIKVEPAGPGEVAFRMDDVTSQDLEGDYVALVDFSQESRGGSPIQEVGTSNGYPLGALEELAGTKEIPFCERMLPLSWAKGGSSLEKWACEKPESLEEELCVWGLRRKPNDKVPTQDSEHQPQDPYLHVLVNPLHCVSGLGAGVSEEPAATKTQRLLGNPESMVQLRPKPKQASSPRLRPASPCPAPAPENRMEDRTKQGRGRLPKPVTSPGQNTSSCRSPTSRPKFSFLKGLRQAAVPTEKASLQPDGPWKILCSLYSPKPSRDRCLGKAGTTQTKTSGPDADSDPLTEEKTGFPEASADPPEKSPALDEEPPGLEPRIGALSVEILHSRIASLPGGRDRAGRPLLLVSTSNGLWEAPWCTASEVAKLFSCLCTIPRPEDKTQGLAVVIDARKQPPHPGLVSALQATQALIPTSIGALLFLGEKEAALQLEALPGIQVEVLPSLKALSHHVDPSQLPTALEGPFPYCPSEWVQFFQVSNHTAFSPHPRPFSFSLHCPAPWIH", "length": 750, "header": "tr|A0A5G2R187-1|F1SDX5_PIG Computationally mapped isoform of KIAA1755 OS=Sus scrofa OX=9823 GN=KIAA1755 PE=4 SV=1 CANONICAL=F1SDX5-1" }, "locus": { "chromosome": "17", "start_pos": 41321036, "end_pos": 41290817, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087435.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087435.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070125.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070125.1" } ] } }, { "isoform_ac": "F1SDX5-1", "url": "https://www.uniprot.org/uniprotkb/F1SDX5/entry#F1SDX5-1", "sequence": { "sequence": "MDSPSLDTAIQHALAGLYPPFEATAPTILGQVFRLLDSDFQGDGLSFLLDFLIPAKRLCEQVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIMIKCLSVDLRTVDTKPVPMSAYAMLFTQAWLEAINSDFEGGPLHNCLVASEDGVVSVPWTKIASPEFVDDRPQTENVLSPAWGSLQLEALDLSSSQELHQARSPGSQVLLTRSLAKGKSRTRGNKYPGLIKVEPAGPGEVAFRMDDVTSQDLEGDYVALVDFSQESRGGSPIQEVGTSNGYPLGALEELAGTKEIPFCERMLPLSWAKGGSSLEKWACEKPESLEEELCVWGLRRKPNDKVPTQDSEHQPQDPYLHVLVNPLHCVSGLGAGVSEEPAATKTQRLLGNPESMVQLRPKPKQASSPRLRPASPCPAPAPENRMEDRTKQGRGRLPKPVTSPGQNTSSCRSPTSRPKFSFLKGLRQAAVPTEKASLQPDGPWKILCSLYSPKPSRDRCLGKAGTTQTKTSGPDADSDPLTEEKTGFPEASADPPEKSPALDEEPPGLEPRIGALSVEILHSRIASLPGGRDRAGRPLLLVSTSNGLWEAPWCTASEVAKLFSCLCTIPRPEDKTQGLAVVIDARKQPPHPGLVSALQATQALIPTSIGALLFLGEKEAALQLEALPGIQVEVLPSLKALSHHVDPSQLPTALEGPFPYCPSEWVQFFQKLDPFLADLRRASSLLKASIKELEKGDPPGGVQEAARCLSKSKELMEAVLRDPGLLSLQREGGATLAQLQQEGSRLNFNPDVRSHLAEATALYSLVDEQLHVLVTVSNHLLRRLGLRVRLGRLEAAIHQVSNWMEQEGSQYLQVLTPKDGSLETVEKNHAMFEDFFLQAAAQYRRGLELSKQAAQLEAAARGAGEAGGSELPELAAFAFTQRAFQAKLTHFYMAAERQRTDLETLLHLHRFCKKVTWFHMDCQDLMTQLRLGKAQRASPGDQRRLHRYLQRLASEFPAEKLTAMGLQVASLSQEGLGQDLWEEARERHEEIQTLLKKALARCPCPTGPPVLPARLEVREAAAKRQGPNGEVTPEGGRGLPLPDSPGLDRSAKSYWPPWAPRRGQNRNVQAAPPPQEAGQALEADGGKSPHGPLDPAPEGFLTTLFSWQRLPRQSRGPHAAGGSFSSEGTGSLTSLEDSPHTSPPASL", "length": 1201, "header": "tr|F1SDX5-1|F1SDX5_PIG Isoform 1 of KIAA1755 OS=Sus scrofa OX=9823 GN=KIAA1755 PE=4 SV=2 CANONICAL=F1SDX5-1" }, "locus": { "chromosome": "17", "start_pos": 41321036, "end_pos": 41276061, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008036.3", "url": "https://www.ensembl.org/id/ENSSSCT00000008036.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007822.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007822.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R187", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R187" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YIP1-1", "protein_name": "KIAA1755", "gene_name": "KIAA1755", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDSQSLDAAVQSALRALYPPFEATAPAVLGQVFRLLESSYQGDGLCCLLDFLIPAKRLFEHVRRAACAPYSNCIFLHEGWPLCLHEKVVVHLAPLNPLLLRAGDFYLQAEPCQEHAARIALKHLSPDLDSVQETPVPESTYALLFTNEWLEEINCNYAGPPLHTCLVATENGVTPLPWSKIATPEFVDKPKAEPSGTLMGAPGGPGPEPAALTEPMASITPTPHGTAESSVPYSNIAGIAPGCRDSWKPNQGRYPGLIKVEQAGMRQNPTTLAVPSLQEIISQNLGGEYVELLQLSQQDLGLLATSRSVAAQPWVGSWPCRGALSSQDGPCTPCQRRRRLSGEPGPHGPRCRHRDSYLAALQNPVSFGPALMAAILEEPDSSAPLAEPPVQGGSGASTPCSRRARARGSGGQAVGQRSPHLPTAPTRSEAVGSGHKFSFLKGPRLGESAGSQHESGWRKVSAIYSPRMGRAKPAGKGADVAAAAPAEERSPQSTTSQNGPSVPWQELHAGLLHSGIICLPGGTDKLGRALLQVTTSSSAWGAAWCSAAELARLLLCLCSLPRKDAKDSGLTAVVDARKQPPSPTLYSALRSIQNISPGCIHTVLLLAEKEPSAPREKLPGLQVETLTSLKALGRFVDSSQVTAELEGTFPYCHGEWVQFFQRLQPFTASLGRASELLQSCIQELQSTDGAAGMQDAAARIERHQELMRRVLSDPQLVCLQREGGAVLARLRRDAARLRASPHVRAGMDAAEARYAQLEEELHLLVALSNSRLERLSALRKVQELEAELGELTQWLDGEGAARLREMGAEECSPDSCERFTERWSQFLLQAAARHRHGLALCQQADKLQDSVFPEAEPLQAAVALFRTKLMSFQQRMERRQAELEMLHELHRFSGKITCLNAGCRQCSEQTKHGGIPAGRPEALQRLESSFQRLSVEFSTEKLQEMRAQLRRMQSSSGMGAWTAAWHKYQQTRQSLEAMLAELWEGSAASAPCHGAVQASGQPSASSARGRAAGTERRDAARSPAGSPRPRCSSLPTRGGGTPPRPKGNPSQLRSPPRRVSPSPPRAPLCGEPPAHGSAHPRGDAAQYFQVSSHSSFSSEDSDTQNSADETPAAVPAAPQDLGPPGSPKKPSPIVYLENHRAAGLGRADTK", "length": 1150 }, "evidence": [ { "id": "F1SDX5", "url": "https://omabrowser.org/oma/group/F1SDX5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MPM8-1", "protein_name": "KIAA1755", "gene_name": "KIAA1755", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDPPSLDAAIQHALAGLYPPFEATAPTILGQVFRLLDSDFRGDGLNFLLDFLIPAKRLCEQVREAACAPYSHRLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPREEQSVCLTIKCLSVDLRTVDAKPVPESSYPLLFTQAWLEAINSDSEGSPLHNCLVASEDGMAPVPWTKITSPEFVDDKPPAVHLLSPAWESLQLEALDLSSSQELHQARCPDRQVLLVQSLGKGRTHRNKYPGLIKVEQAGPGEVGFRVEDLEGEYVALLDFSQESREGSPSKEVAMPSGCPLGTPEELSGTKEIPFSQRMLPLSGANGEPSLEKWACEKPESLGEKPCVWGLGRKANDKVPTQDSEHQPREPYLSIFVNPLHCASGLGTGGSEEPPASKTQGIQGNSENVVQLKPGPKQAPSPRLCPASPLAAPASKTKMEERTKQGNGRLAKPVTKAGRNTSSSGSPTPGLKFSFLKGQRQAPAAPEKASLQHDGPWKVLCSLYSPKPNRAKCLGKAGTTQTETSGLDADSDPVTEEKADFPEASAGPPEKSPALDEDPPGLEPRIGALSVEIFHSRIACLPGGRDRAGRPLLLVSTTKGPWEAPWCTASEVTKLFSYLCTIPRPEDKTKGLAVVIDARKQPPHPGLVSALQATQALVPASIRAMLFLGEKEAALQLEALPDIQVEVLTSLKALSHHVDPSQLPTALEGPFPYCHGEWVQFFQKLDPFLVDLRQASCLLKASIKEFEKGEPPGGVQEASRCLSKSKELMEAVLRDPGLMSLQREGGATLARLRQEGSRLNFNPDVRSHLAEAAALYSLVDEQLHVLATVSNHLLRRLELRVRLGRLEAAIHQVSHWMEQEGSRCLQVLTPKDGSLDTVEKAHAEFEDFFLQAAAQYRRGLELCKQAAQLAAAARAGEAGGTELPELAAFAFTQRAFQAKLTHFYMAAERQRTDLETLLHLHHFCKKVTWFHMDCQDLMAQLRLGKAQRTSPGDQRRLHRYLQRLASEFPAEKLTAMGLQVASLSREGLGRDLWEEAQARHEDIQMLLKKALAHCPCPAGSPAHPTCPELRGAATKDQGLNGEVTSKGRWDLPLQDSLGSDRSPKSRWPPWAPRRGQNRNLQAAPPTQEAGQAVEADEGRTPHGPLDPAPERFLTTLFSWQRLPRQTQISQPAGDSFSSEGTGSQTSLEDSPHTSPPASL", "length": 1193 }, "evidence": [ { "id": "F1SDX5", "url": "https://omabrowser.org/oma/group/F1SDX5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5JYT7-1", "protein_name": "Uncharacterized protein KIAA1755", "gene_name": "KIAA1755", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPPSLDTAIQHALAGLYPPFEATAPTVLGQVFRLLDSGFQGDGLSFLLDFLIPAKRLCEQVREAACAPYSHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVEPQEEQSVCIMIKCLSLDLCTVDKKPVPEPAYPILFTQEWLEAINSDFEGNPLHNCLVASENGIAPVPWTKITSPEFVDDRPQVVNALCQAWGPLPLEALDLSSPQELHQASSPDNQVLPAQSLAKGKGRTYGSKYPGLIKVEQARCGEVAFRMDEVVSQDFEGDYVALLGFSQESRGESPSREAGTSSGCTSGALEEIAGTKETPLFQKILPLSEANEGPSLGNRACTKPESSEERPYNLGFRRKVNLKAPTHNSERPPQGSYMNVLEDALDCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPRQASSPRLSPASPAAAASETKIEVKTKERNGRLPKPMPCPSRNTSSPEPPTPGLKFSFLRGQRQPSVTPEKASLQHNGPWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTLEEEPPGPEPRIGALGVKVFRSRIACLPGGRDRAGRPLLLVSTTEGAWEAPWCTVSEVTKLLSYLCTIPRPEDKAKGLAVLIDARRQPPQPGLVSALQATQAQVPASIRAILFLGEKEAALQLQTLPDVQVEVLTSLKALSHHVDPSQLPAVLEGPFPYCHTEWVHFFQKLDPFLADLHQASSLLQASIEEFEKADPPGGMQEATRCLSKSKELMEAVLRDPGLLGLQREGGATLARLQHDASRLDFSPDVRSHLAAATALYSLVDEQLHVLVTASNSLLGKLELRVRLGRLEAAIHQVSDWMEQEGRRCLQSLTPKDGSLETVEKAHAEFENFFLQAAAQYRRGLELSKQAAQLGATARGAGEAERAEFPELAAFASTQRAFQAELTHFYMAAERQRTDLETLLHLHRFCKRMTWFHMDCQDLMAQLRLDKTSRVSPGDQRRLHRYLQRLASEFPAEKLAAVGLQVASLSRAGLGQELWEEARIRHEEIRMLLEKALTHSSCPEAPAAHSARPERRGVAAKGQGVSVEVTSKGRWDQPPLDSLGMDHLPKSYWPPGPPRGEQNRTFQAGSPPQEAGQAAEAEDGKGSHKLPDPAREHLLATTFFRQQPPRQSQVPRLTGGSFSSEGTDSQTSLEDSPQTSPLASL", "length": 1200 }, "evidence": [ { "id": "F1SDX5", "url": "https://omabrowser.org/oma/group/F1SDX5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BWG4-1", "protein_name": "Uncharacterized protein KIAA1755 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPSALDMAIQHALAGLYPPFEATAPTVLGQVFRLLDSDFRGDGLSFLLDFLIPAKRLCEQVREAACALYTHCLFLHEGWPLCLRDEVVVHLAPLNPLLLRQGDFYLQVESWEEQSVHMTLKCLSSDLREVDKKPIPESSYSLIFTPEWLEAINNDFEGRPLHNCLVASENGITPVPWTKITSPEFVDDRPPIVKVPSSDGDSCPLEDLHLSRPQEPYQAGDLGGKGSVAQIWDKGKGKLSGDKYPGLIKVEPARSGQLAFRTDSEASQSLEGDYVALLGFPQEYRGASPDSEVVTLSVDIQKSQETRPRTKGAPLLGKTLPLSGPAGAPPLGRWACERPAGSGEKPCSGGSRRKARHKASGHTAVRQPQQPHTSVPEKLPDCTSGLVEDTEEEPAASEMQKPVGMPEAMVRLRPGPRQAFSPLLSSAGPGSPAAETKTEETTLGHGRASKPEDCLNKNASFHGSPAPGLQFSFLKEQRVPHVTPEKALLQHARPRKALCPLYSLQPCEAKAPGKDGTTLPTTSGSGPLSGEPPGFRRDSAGPPGGGLRLEECSRTKPRIETLGVKLLQSGIACLPGGRDKVGRPLLLVSTAEDAWEAPWCTTSEVAELLSYLCSVPRLEDKAKGLLVVIDARKGTQRPGLVSALQGIQALAPASVSKVLLLGEKASIPQLSVLPAQVEVLTSLKALRNHVDPSQLPEALEGPFPYHHSEWVQFFQKLDPFLTDLRQASSLLQASIQEFEKGEPPGGVQEATRCLSKSKELMETVLRDPGLLALQREGGTTLASLQQEASGLNANPDVRSHLTEAAALYNLVDGQLHDLVTASNQLLRRLELRVRLGHLETAIHQVSDWMAGEGSQSLQALAPVHVCAETVEKVHAEFEDFFLQVAAQYRQGLDLSKQAAQLGAAEEGAGEMGLPDLAAFASTQQAFQARLTHFYMAAERQRTDLETLLHLHRFRRKMSRFHMDCQNLLTQLSLGKAVKASPGDQLHLRLHCYLKRLASEFQTEKLLAMKLQVASLSRPGLGQEVWEEAQERHQEIQSLLRKALAYCPCPEVPATQVALIDRSRPVAKGQGLPREVGSKWDRSLQDSLAVDHVFKSQRTPQGEQSRNMWAGLLSPEPGQSGDTEEVRGTPKLPDPTLERLLASLFSWPHLPKQSKASRPTGGSFSSEGTGSQTSLEDSPHTSPPASL", "length": 1187 }, "evidence": [ { "id": "F1SDX5", "url": "https://omabrowser.org/oma/group/F1SDX5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WVJ6-1", "protein_name": "Protein-glutamine gamma-glutamyltransferase 2", "gene_name": "Tgm2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEELNLERCDLEIQANGRDHHTADLCQQKLVLRRGQRFRLTLYFEGRGYEASVDRLTFGAVTGPDPSEEAGTKARFSLSDDVEEGSWSASVLDQQDNVLSLQLCTPANAPVGQYRLSLETSTGYQGSSFMLGHFILLFNAWCPADDVYLDSEAERREYVLTQQGFIYQGSVKFIKSVPWNFGQFEDGILDACLMLLDVNPKFLKDRSRDCSRRSSPIYVGRVVSGMVNCNDDQGVLLGRWDNNYGDGISPMAWIGSVDILRRWKEHGCQQVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSAHDQNSNLLIEYFRNEYGELESNKSEMIWNFHCWVESWMTRPDLQPGYEGWQAIDPTPQEKSEGTYCCGPVSVRAIKEGDLSTKYDASFVFAEVNADVVDWIRQSDGSVLKSINNSLVVGQKISTKSVGRDDREDITYTYKYPEGSPEEREVFTRANHLNKLAEKEETGVAMRIRVGDGMSLGNDFDVFAHIGNDTSESRECRLLLCARTVSYNGVLGPECGTEDINLTLDPYSENSIPLRILYEKYSGCLTESNLIKVRGLLVEPAANSYLLAERDLYLENPEIKIRILGEPKQNRKLVAEVSLKNPLSDSLYDCVFTVEGAGLTKEQKSVEVSDPVPAGDAVKVRVDLFPTDIGLHKLVVNFQCDKLKSVKGYRNIIIGPA", "length": 686 }, "evidence": [ { "id": "F1SDX5", "url": "https://omabrowser.org/oma/group/F1SDX5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 461, "end_pos": 463, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SDX5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1201, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SDX5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SDX5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SDX5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDX5" }, { "id": "PF27632", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27632" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rho guanine nucleotide exchange factor 40-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 997, "end_pos": 1054, "start_aa": "Arg", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SDX5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDX5" }, { "id": "PF27628", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27628" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rho guanine nucleotide exchange factor 40-like N-terminal", "eco_id": "ECO_0000259", "start_pos": 5, "end_pos": 182, "start_aa": "Ser", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 461, "end_pos": 463 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, 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"PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379:SF81", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379:SF81", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13465", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13465", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A5S8", "url": "https://www.uniprot.org/uniprotkb/A0A287A5S8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A5S8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A5S8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1U2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1U2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1U2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1U2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCF3-1", "url": "https://www.uniprot.org/uniprotkb/F1SCF3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGPAQLGSAAGLPLPSLSPSGAEKRLGKPKHRKQKFRMDELGGGRQSPEGRIPTETLSPGAGVMESVTLKDVAMGLIQEWALLDDAWRNLCRYMLLDNCRTLAPRAGAPPCKASLVSQVGPRKELRAAEGGILQATCADWESQLKFKEYPPLQDILEEISHHDLQMGPGLDLRMQIMSGMGEREIALTPEDRSALQESPWSDYTGLKVAMQIHKMAMPEPALSLPNLWAAGVPALPTQDPTGLQEESTKEEAMVPGGVTTYPQEPVTFMDVAVLFTPEEWLFLDSAQRSLYRDVMLENYRNLVFVGDQLCKASRFSHVEQREELCITERRIFLGAHLGEHQADWEPPARSEPQLQPQDSIPNQDIFVEITSMGMKKEQPLTGEKLSEYSELRMPCNSTQPLFQYQRIPALGEPYECQESGKPFFQTAHLTVPEKIRSGDKTFECNKCEKSFRYSSDLLRHEKTHTAEKCFECQECRQAFKYSSNLRRHMRTHTGEKPFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHMRTHTGEKPFECGQCGKAFREHSSLKTHLRTHTREKPYACNQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHMRTHTGEKPYTCQECGRAFSEPSSLRKHARTHSGKKPYECQECGRAFGQSSHLIVHVRTHTAGRPYKCNQCEKAFRHSSSLTVHKRIHSGRENVQTGGLPLSVSLPYDRHLVH", "length": 741, "header": "tr|F1SCF3-1|F1SCF3_PIG Isoform 1 of Zinc finger protein 333 OS=Sus scrofa OX=9823 GN=ZNF333 PE=3 SV=3 CANONICAL=F1SCF3-1" }, "isoforms": [ { "isoform_ac": "A0A287A5S8-1", "url": 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"chromosome": "2", "start_pos": 64607594, "end_pos": 64588331, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049284.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049284.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039168.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039168.2" } ] } }, { "isoform_ac": "A0A5G2R1U2-1", "url": "https://www.uniprot.org/uniprotkb/F1SCF3/entry#A0A5G2R1U2-1", "sequence": { "sequence": "MESVTLKDVAMGLIQEWALLDDAWRNLCRYMLLDNCRTLAPRAGAPPCKASLVSQVGPRKELRAAEGGILQATCADWESQLKFKEYPPLQDILEEISHHDLQMGPGLDLRMQIMSGMGEREIALTPEDRSALQESPWSDYTGLKVAMQIHKMAMPEPALSLPNLWAAGVPALPTQDPTGLQEESTKEEAMVPGGVTTYPQEPVTFMDVAVLFTPEEWLFLDSAQRSLYRDVMLENYRNLVFVGDQLCKASRFSHVEQREELCITERRIFLGAHLGEHQADWEPPARSEPQLQPQDSIPNQDIFVEITSMGMKKEQPLTGEKLSEYSELRMPCNSTQPLFQYQRIPALGEPYECQESGKPFFQTAHLTVPEKIRSGDKTFECNKCEKSFRYSSDLLRHEKTHTAEKCFECQECRQAFKYSSNLRRHMRTHTGEKPFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHMRTHTGEKPFECGQCGKAFREHSSLKTHLRTHTREKPYACNQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHMRTHTGEKPYTCQECGRAFSEPSSLRKHARTHSGKKPYECQECGRAFGQSSHLIVHVRTHTAGRPYKCNQCEKAFRHSSSLTVHKRIHSGRENVQTGGLPLSVSLPYDRHLVH", "length": 678, "header": "tr|A0A5G2R1U2-1|F1SCF3_PIG Computationally mapped isoform of Zinc finger protein 333 OS=Sus scrofa OX=9823 GN=ZNF333 PE=3 SV=1 CANONICAL=F1SCF3-1" }, "locus": { "chromosome": "2", "start_pos": 64602897, "end_pos": 64588331, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081737.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081737.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071151.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071151.1" } ] } }, { "isoform_ac": "F1SCF3-1", "url": "https://www.uniprot.org/uniprotkb/F1SCF3/entry#F1SCF3-1", "sequence": { "sequence": "MGPAQLGSAAGLPLPSLSPSGAEKRLGKPKHRKQKFRMDELGGGRQSPEGRIPTETLSPGAGVMESVTLKDVAMGLIQEWALLDDAWRNLCRYMLLDNCRTLAPRAGAPPCKASLVSQVGPRKELRAAEGGILQATCADWESQLKFKEYPPLQDILEEISHHDLQMGPGLDLRMQIMSGMGEREIALTPEDRSALQESPWSDYTGLKVAMQIHKMAMPEPALSLPNLWAAGVPALPTQDPTGLQEESTKEEAMVPGGVTTYPQEPVTFMDVAVLFTPEEWLFLDSAQRSLYRDVMLENYRNLVFVGDQLCKASRFSHVEQREELCITERRIFLGAHLGEHQADWEPPARSEPQLQPQDSIPNQDIFVEITSMGMKKEQPLTGEKLSEYSELRMPCNSTQPLFQYQRIPALGEPYECQESGKPFFQTAHLTVPEKIRSGDKTFECNKCEKSFRYSSDLLRHEKTHTAEKCFECQECRQAFKYSSNLRRHMRTHTGEKPFECSQCGKTFTRNFNLILHQRNHTGEKPYECKDCGKAFNQPSSLRSHMRTHTGEKPFECGQCGKAFREHSSLKTHLRTHTREKPYACNQCGKPFRTSTHLNVHKRIHTGEKLYECATCGQVLSRLSTLKSHMRTHTGEKPYTCQECGRAFSEPSSLRKHARTHSGKKPYECQECGRAFGQSSHLIVHVRTHTAGRPYKCNQCEKAFRHSSSLTVHKRIHSGRENVQTGGLPLSVSLPYDRHLVH", "length": 741, "header": "tr|F1SCF3-1|F1SCF3_PIG Isoform 1 of Zinc finger protein 333 OS=Sus scrofa OX=9823 GN=ZNF333 PE=3 SV=3 CANONICAL=F1SCF3-1" }, "locus": { "chromosome": "2", "start_pos": 64607594, "end_pos": 64588331, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015063.4", "url": "https://www.ensembl.org/id/ENSSSCT00000015063.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014658.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014658.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R1U2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1U2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516595", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516595", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SCF3", "url": "https://www.uniprot.org/uniprotkb/F1SCF3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 396, "end_pos": 398, "annotation": "n_glycosylation_sequon" }, { "start_pos": 519, "end_pos": 521, "annotation": 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"https://www.uniprot.org/uniprotkb/F1SET8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SET8-1", "url": "https://www.uniprot.org/uniprotkb/F1SET8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGAACGGSPRPPGRPFSCREEEEGAVSEAAWRRRRRWGELSIAAAAGGGLVGLVCYQLYGDPRAESARAPGPWLPSESAAAEPQDLSRGRGLLPIPVAAAKETVAVGRTDIEDLDLYATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKFAKTWKSLSKQELNQMLSETPPVWKGSSKLFRNLKEKGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVYSFYKTYRLYFNKAGKKCCYQLQEIFRKKNEKRETKGDEEKRAMLRLQLYGYHSPTNSVLKTDAEELVSRSYWDTLRRNTSQALFSDLAERADDITSLVTDTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR", "length": 527, "header": "tr|F1SET8-1|F1SET8_PIG Isoform 1 of Mitochondrial calcium uptake family member 3 OS=Sus scrofa OX=9823 GN=MICU3 PE=1 SV=3 CANONICAL=F1SET8-1" }, "isoforms": [ { "isoform_ac": 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CANONICAL=F1SET8-1" }, "locus": { "chromosome": "17", "start_pos": 4823692, "end_pos": 4721263, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062047.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062047.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043692.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043692.2" } ] } }, { "isoform_ac": "A0A5G2R2B3-1", "url": "https://www.uniprot.org/uniprotkb/F1SET8/entry#A0A5G2R2B3-1", "sequence": { "sequence": "MGAACGGSPRPPGRPFSCREEEEGAVSEAAWRRRRRWGELSIAAAAGGGLVGLVCYQLYGDPRAESARAPGPWLPSESAAAEPQDLSRGRGLLPIPVAAAKETVAVGRTDIEDLDLYATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKFAKTWKSLSKQELNQMLSETPPVWKGSSKLFRNLKEKGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVYSFYKTYRLYFNKAGKKCCYQLQEIFRKKNEKRETKGDEEKRAMLVLKTDAEELVSRSYWDTLRRNTSQALFSDLAERADDITSLVTDTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR", "length": 514, "header": "tr|A0A5G2R2B3-1|F1SET8_PIG Computationally mapped isoform of Mitochondrial calcium uptake family member 3 OS=Sus scrofa OX=9823 GN=MICU3 PE=1 SV=1 CANONICAL=F1SET8-1" }, "locus": { "chromosome": "17", "start_pos": 4823692, "end_pos": 4721263, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080189.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080189.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070486.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070486.1" } ] } }, { "isoform_ac": "F1SET8-1", "url": "https://www.uniprot.org/uniprotkb/F1SET8/entry#F1SET8-1", "sequence": { "sequence": "MGAACGGSPRPPGRPFSCREEEEGAVSEAAWRRRRRWGELSIAAAAGGGLVGLVCYQLYGDPRAESARAPGPWLPSESAAAEPQDLSRGRGLLPIPVAAAKETVAVGRTDIEDLDLYATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKFAKTWKSLSKQELNQMLSETPPVWKGSSKLFRNLKEKGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVYSFYKTYRLYFNKAGKKCCYQLQEIFRKKNEKRETKGDEEKRAMLRLQLYGYHSPTNSVLKTDAEELVSRSYWDTLRRNTSQALFSDLAERADDITSLVTDTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR", "length": 527, "header": "tr|F1SET8-1|F1SET8_PIG Isoform 1 of Mitochondrial calcium uptake family member 3 OS=Sus scrofa OX=9823 GN=MICU3 PE=1 SV=3 CANONICAL=F1SET8-1" }, "locus": { "chromosome": "17", "start_pos": 4823692, "end_pos": 4721263, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007646.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007646.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007439.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007439.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2B3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2B3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8949215", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8949215", "resource": "Reactome", "description": "Mitochondrial calcium ion transport" }, { "id": "R-SSC-8949664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8949664", "resource": "Reactome", "description": "Processing of SMDT1" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0B4KHF1-1", "protein_name": "Mitochondrial calcium uptake 3, isoform D", "gene_name": "MICU3", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAGLAARLTVKNCTIIAQRSSVIVGVGRSARFSSSSSQMGRIPGHKTRRLLTIVGGSAVSLAALAAFIKLRSAENPVNAVSLKRRMRDDSELENVKLTARERRFIKFASVEYDDQLYMTPQDFLDSVVEQEPRPRLKRRQLSSDEVDKYKENTPALKKGSTRLFRNLRDKGIVSYTEYLFLLSILTKPKSGFRIAFNMFDTDGNQRVDKDEFLVIISILAGALKDTQNVDPQTKRILSRLVSYDEQSQMTKPMAVPQAKRGIMERIFSGAWKEKHGEQEPEEELATPTPLEQNYVNDGEGLQRRHMVATTLQLHFFGKRGTGVINYDNFYRFMDNLQTEVLELEFHEFSKGNSVISELDFAKILLRYTYLATDEYDVFLERLLERVKDEKGISFHDFRDFCHFLNNLDDFTIAMRMYTLADRAISKDEFSRAVKICTGYKLSPHLIDTVFAIFDADGDGLLSYKEFIAIMKDRLHRGFKVSGRFFDYNEALDAYDEPDYPLFVAWRHRVCRHLDYFIDSDALWH", "length": 524 }, "evidence": [ { "id": "F1SET8", "url": "https://omabrowser.org/oma/group/F1SET8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "A0A1D5PEC4-1", "protein_name": "Mitochondrial calcium uptake family member 3", "gene_name": "MICU3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAALRTLLRWRRRLGSAPSAPSARRLWAGGGAGPAGPRRWRRELGWAAGAALAGYAGYQLSERRREPSRQPAAAEAGGARALLPIPVAAAAKETVTENRSDLEDLHLYATPREQRFRRFASLEFEGQLYMTPYDFIQAVTNDEPKRAKKWRSLSKQELNQILMETPPVWKGSSKLFRNLNEKGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKRERKGDEEKRAMLRLQLYGYHTPTNSVLKTEGEDLVPRSYWDTLRRSTSQALFSDLAERSDDLASSLSDTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSSYLENMRCRIPEEKGITFDEFRSFFQFLNNLEDFTIAMQMYNFASRSIGQDEFKRAVYVATGVKLSPHLVNTVFKIFDVDRDDQLSYKEFIGIMKDRLNRGFRESPKYGWKEYYSCVMTVTSEHLRDLWKQFRRRDMLR", "length": 511 }, "evidence": [ { "id": "F1SET8", "url": "https://omabrowser.org/oma/group/F1SET8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8I6A2H6-1", "protein_name": "Calcium uptake protein 3, mitochondrial", "gene_name": "Micu3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRRLLWPPPRLSPTLAPQQPFLSPWGRPAGTAPGMSGRPFSGREEDEGAVAEAAWRRRRWGELSIAAAAGGGLVGLVCYQLYGDPRADPSELVAPELDESPRGRGLLPIPVAAAKETVATGRAVTEDLDLYATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKFAKTWKSLSKQELSQMLSETPPVWKGSSKLFRNLKERGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKRETKGDEEKRAMLRLQLYGYHSPTNSVLKPDAEELVSRSYWDTLRRSTSQALFSDLAERADDITSLVADTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR", "length": 523 }, "evidence": [ { "id": "F1SET8", "url": "https://omabrowser.org/oma/group/F1SET8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MHU1-1", "protein_name": "Mitochondrial calcium uptake family member 3", "gene_name": "MICU3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALRRLLWPPPRLPPPCSPHHPAHGPWGRPAGTAPGPPGRPFSCREEDEGAVAEAAWRRRRRWRELSFAAAAGGGLVGLVCYQLYGDPRADSARAAGPWLPSDSAAAEPEDPPGGGGLFPIPVAAAKETVAVGRTEVEDLDLYATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKIAKTWKSLSKQELNQMLSETPPVWKGSSKLFRNLKEKGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKRETKGDEEKRAMLRLQLYGYHSPTNSVLKTDAEELVSRSYWDTLRRNTSQALFSDFAERADDITNLVTDTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR", "length": 533 }, "evidence": [ { "id": "F1SET8", "url": "https://omabrowser.org/oma/group/F1SET8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q86XE3-1", "protein_name": "Calcium uptake protein 3, mitochondrial", "gene_name": "MICU3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAALRRLLWPPPRVSPPLCAHQPLLGPWGRPAVTTLGLPGRPFSSREDEERAVAEAAWRRRRRWGELSVAAAAGGGLVGLVCYQLYGDPRAGSPATGRPSKSAATEPEDPPRGRGMLPIPVAAAKETVAIGRTDIEDLDLYATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKVAKTWKSLSKQELNQMLAETPPVWKGSSKLFRNLKEKGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKREIKGDEEKRAMLRLQLYGYHSPTNSVLKTDAEELVSRSYWDTLRRNTSQALFSDLAERADDITSLVTDTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSIPEEKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKFSPHLVNTVFKIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR", "length": 530 }, "evidence": [ { "id": "F1SET8", "url": "https://omabrowser.org/oma/group/F1SET8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CTY5-1", "protein_name": "Calcium uptake protein 3, mitochondrial", "gene_name": "Micu3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAALRRFLWPPPRLSPALAPQQPFLSPWGRPAGTAPGMSGRPFSCREEDEGAVAEAAWRRRRWGELSIAAAAGGGLVGLVCYQLYGDPRADPSELAAPELEDPPRGRGLLPIPVAAAKETVATGRAITEDLDLYATSRERRFRLFASIECEGQLFMTPYDFILAVTTDEPKFAKTWKSLSKQELSQMLSETPPVWKGSSKLFRNLKERGVISYTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIFRKKNEKRETKGDEEKRAMLRLQLYGYHSPTNSVLKTDAGELVSRSYWDTLRRSTSQALFSDLAERADDITSLVADTTLLVHFFGKKGKAELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILLRYTNVENTSVFLENVRYSISEEKGITFDEFRSFFQFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGLKLSPHLVNTVFKIFDVDKDDQLSYKEFIGIMKDRLHRGFRGYKTVQKYPTFKSCLKKELHSR", "length": 523 }, "evidence": [ { "id": "F1SET8", "url": "https://omabrowser.org/oma/group/F1SET8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" }, { "name": "mitochondrial intermembrane space", "id": "GO:0005758", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005758", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" }, { "name": "uniplex complex", "id": "GO:1990246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990246", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" }, { "name": "calcium ion sensor activity", "id": "GO:0061891", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061891", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "calcium import into the mitochondrion", "id": "GO:0036444", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036444", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" }, { "name": "cellular response to calcium ion", "id": "GO:0071277", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071277", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" }, { "name": "mitochondrial calcium ion homeostasis", "id": "GO:0051560", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051560", "evidence": [ { "database": "UniProtKB", "id": "F1SET8", "url": "https://www.uniprot.org/uniprotkb/F1SET8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 314, "end_pos": 316, "annotation": "n_glycosylation_sequon" }, { "start_pos": 400, "end_pos": 402, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SET8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 527, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SET8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SET8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SET8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SET8" }, { "id": "PS50222", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50222" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EF-hand", "eco_id": "ECO_0000259", "start_pos": 467, "end_pos": 502, "start_aa": "Leu", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 314, "end_pos": 316 }, { "start_pos": 400, "end_pos": 402 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SGP1-1", "uniprot_ac": "F1SGP1", "uniprot_id": "F1SGP1_PIG", "mass": { "chemical_mass": 200380.0, "monoisotopic_mass": 200380.0 }, "refseq": {}, "gene_names": [ { "name": "DCDC1", "type": "recommended", "evidence": [ { "id": "F1SGP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGP1" } ] } ], "protein_names": [ { "name": "Doublecortin domain containing 1", "type": "synonym", "evidence": [ { "id": "F1SGP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGP1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SGP1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DCDC1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1", "locus": { "chromosome": "2", "start_pos": 29792979, "end_pos": 29365195, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013326", "url": "https://www.ensembl.org/id/ENSSSCG00000013326" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013326", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013326", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17155", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17155", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17156", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17156", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17157", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17157", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17158", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17158", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd17159", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17159", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003533", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003533", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036572", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036572", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043188", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043188", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056415", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056415", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057424", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057424", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46302", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46302", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46302:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46302:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF24478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25510", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25510", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1SXR8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SXR8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1SXR8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SXR8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2R1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2R1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R2R1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2R1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGP1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGP1-1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEEHRAALSQVPLSPLTKAKEVSQLSSPEGAFSGDTVHPIYKYISNDLPREFMSFQAKAVIKTTEDYLQFGPSRLLHSAAVSEGSGLQDCSRHQTASDHSYNEISDPDSCKSNSKNNSCFISASKRNRPVSAPVGQLRVAELSSLKSKLDQNWHKLSQRHKLQPRVIRVTAYKNGSRTVFAKVTVPTITLLLKECTEKLNLNMAARRVFLADGTEALKPEDIPHEADVYVSTGEPFLDPFKKIKDHLLLMKKVTWTMNGLMFPTDIKRRKTKPVLSSRMKKLTEKTSARILFFKNGMGQDGHEITVGKETMKKVLDICTMRMNLNSPARYLYDLYGRKIKDISKVPLLEKCLQNSITPLRGPVWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKFYKQLNLAADEQKGKITEKVILSMTAKEHHQAQEEVNRLIDELQTAIKSHRGHLSKLGPQLQAEQEQFSSYVYQHIKSLPANTLIPGGLQLKIFESGKDTGEISVYISKKDLGPNNPSQTGHMMERLLLKIHQRLQGSSINPPSLNFSSARLFDEHGQEIKNPLLLKNEQKIWVSYGKAYRSPLHPVLGLTFDRVTAFARGGIIVAYKTFLDPNAVLLPGCDNWEICEGFPVNLNGTSQQMPDQFETVNSENHFLQNKADPNMVLHASVSIRKQSFSSSEESSGSQKAPLTLWPAASVWLITKTGMILSRAITQGCLAIGHPIRLKAAEGTSLEGYKLILQKRNKGDDSQKWIFGIDSCIYSKAYPQFVLTYLEELNAQVDVTQTEYHLHHGAWTAAHWEHGSSVAEEVLQSSASIPGLKQLPEPSDAHLMPEGSLGETGQLTVALVRKLEEKHPKASAQRWSIKHEGTGKPGQWKHSRVENPLWNKLTYMWPVLPSGQLNEEFDWPIEGLLLPNSPPMKKPICKTPKQYVPVRLRVLQNGDKNKTRALTIISPGKSPEQKMQCTEILNLPSAARRLFNEKGKEIFNLKDLQRDELVYVSCGEHWINPDLSIAQQKKQIFLRNLASDISKIHTFCSTHKIEALVLEVQSDIVAGAKLAVHKPVPGEEKQIIEPEEKQMQKNALTTENASSEILDSHARAHLRVKACHTLLRYAWQETSHNFDEDDSLPKKTEEELFENMELENKYSHSPKQSKLQKLRRQQFEYRDGQIISCAAPQLVLGVQSPNPHSGTEVVLVDKKADDSHQRWLHEEDSRTFHLVSNPDLVLAVSMTKARDDACGYPVIAQKYKPYDNGTSNQKWNYLKNKKAFMAFHSTAMDKEITAANYAGICTSSVIKEENIDQPGYYYVSPNGKRKIMLCLACGQSMRAEKGLKQLLPGQPFLCASGSKTQKPFSRGPFKVISVAKADLSSDEAENTLSYYEECLLSLRMKTCSQVVSHSSMAVIHQKAVKIIAYKNGDGYRNGKLIVAGTFPMLLTECTQQLGLARAASKVYTKDGTTILSLRDLVLWALDESFIQRDSEEKKKETAPDGTKETRVKNIEVNSRMKMKNKSFPKSVTSDSLDGIDKSLLTLILRNPIAIWVSCGEPFLSPNALQRAEKIGKQNWQKKDKILADLDTMKHKMRQLKGRRVAACQPTTMVPNKSPLQPVVVEGGWTEQTQEEIKLMDLIRHTEAYFSGVQELQSKRNSPIAPKCRTLKKSSLYKQPNAKRVWVYLNGGRPEDGTFARGKTISELLDDCSSRLKLAHPARTLYTPEGEPIHSWDDIERDMVICVTTGHGFITPKELKQLVEVRANYARICRQQGPQATDIVLSPSAKLQSLVTLHSEFLSQTS", "length": 1785, "header": "tr|F1SGP1-1|F1SGP1_PIG Isoform 1 of Doublecortin domain containing 1 OS=Sus scrofa OX=9823 GN=DCDC1 PE=4 SV=5 CANONICAL=F1SGP1-1" }, "isoforms": [ { "isoform_ac": "A0A4X1SXR8-1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1/entry#A0A4X1SXR8-1", "sequence": { "sequence": "MAEEHRAALSQVPLSPLTKAKEVSQLSSPEGAFSGDTVHPIYKYISNDLPREFMSFQAKAVIKTTEDYLQFGPSRLLHSAAVSEGSGLQDCSRHQTASDHSYNEISDPDSCKSNSKNNSCFISASKRNRPVSAPVGQLRVAELSSLKSKLDQNWHKLSQRHKLQPRVIRVTAYKNGSRTVFAKVTVPTITLLLKECTEKLNLNMAARRVFLADGTEALKPEDIPHEADVYVSTGEPFLDPFKKIKDHLLLMKKVTWTMNGLMFPTDIKRRKTKPVLSSRMKKLTEKTSARILFFKNGMGQDGHEITVGKETMKKVLDICTMRMNLNSPARYLYDLYGRKIKDISKEKL", "length": 348, "header": "tr|A0A4X1SXR8-1|A0A4X1SXR8_PIG Computationally mapped isoform of Doublecortin domain containing 1 OS=Sus scrofa OX=9823 GN=DCDC1 PE=4 SV=1 CANONICAL=F1SGP1-1" }, "locus": { "chromosome": "2", "start_pos": 29441967, "end_pos": 29384227, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014551.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014551.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014156.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014156.4" } ] } }, { "isoform_ac": "A0A5G2R2R1-1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1/entry#A0A5G2R2R1-1", "sequence": { "sequence": "MAEEHRAALSQVPLSPLTKAKEVSQLSSPEGAFSGDTVHPIYKYISNDLPREFMSFQAKAVIKTTEDYLQFGPSRLLHSAAVSEGSGLQDCSRHQTASDHSYNEISDPDSCKSNSKNNSCFISASKRNRPVSAPVGQLRVAELSSLKSKLDQNWHKLSQRHKLQPRVIRVTAYKNGSRTVFAKVTVPTITLLLKECTEKLNLNMAARRVFLADGTEALKPEDIPHEADVYVSTGEPFLDPFKKIKDHLLLMKKVTWTMNGLMFPTDIKRRKTKPVLSSRMKKLTEKTSARILFFKNGMGQDGHEITVGKETMKKVLDICTMRMNLNSPARYLYDLYGRKIKDISKVPLLEKCLQNSITPLRGPVWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKFYKQLNLAADEQKGKITEKVILSMTAKEHHQAQEEVNRLIDELQTAIKSHRGHLSKLGPQLQAEQEQFSSYVYQHIKSLPANTLIPGGLQLKIFESGKDTGEISVYISKKDLGPNNPSQTGHMMERLLLKIHQRLQGSSINPPSLNFSSARLFDEHGQEIKNPLLLKNEQKIWVSYGKAYRSPLHPVLGLTFDRVTAFARGGIIVAYKTFLDPNAVLLPGCDNWEICEGFPVNLNGTSQQMPDQFETVNSENHFLQNKADPNMVLHASVSIRKQSFSSSEESSGSQKAPLTLWPAASVWLITKTGMILSRAITQGCLAIGHPIRLKAAEGTSLEGYKLILQKRNKGDDSQKWIFGIDSCIYSKAYPQFVLTYLEELNAQVDVTQTEYHLHHGAWTAAHWEHGSSVAEEVLQSSASIPGLKQLPEPSDAHLMPEGSLGETGQLTVALVRKLEEKHPKASAQRWSIKHEGTGKPGQWKHSRVENPLWNKLTYMWPVLPSGQLNEEFDWPIEGLLLPNSPPMKKPICKTPKQYVPVRLRVLQNGDKNKTRALTIISPGKSPEQKMQNVDTERKGNVKNAYVTKYSETETNQAGFHQLLERCTEILNLPSAARRLFNEKGKEIFNLKDLQRDELVYVSCGEHWINPDLSIAQQKKQIFLRNLASDISKIHTFCSTHKIEALVLEVQSDIVAGAKLAVHKPVPGEEKQIIEPEEKQMQKNALTTENASSEILDSHARAHLRVKACHTLLRYAWQETSHNFDEDDSLPKKTEEELFENMELENKYSHSPKQSKLQKLRRQQFEYRDGQIISCAAPQLVLGVQSPNPHSGTEVVLVDKKADDSHQRWLHEEDSRTFHLVSNPDLVLAVSMTKARDDACGYPVIAQKYKPYDNGTSNQKWNYLKNKKAFMAFHSTAMDKEITAANYAGICTSSVIKEENIDQPGYYYVSPNGKRKIMLCLACGQSMRAEKGLKQLLPGQPFLCASGSKTQKPFSRGPFKVISVAKADLSSDEAENTLSYYEECLLSLRMKTCSQVVSHSSMAVIHQKAVKIIAYKNGDGYRNGKLIVAGTFPMLLTECTQQLGLARAASKVYTKDGTTILSLRDLVLWALDESFIQRDSEEKKKETAPDGTKETRVKNIEVNSRMKMKNKSFPKSVTSDSLDGIDKSLLTLILRNPIAIWVSCGEPFLSPNALQRAEKIGKQNWQKKDKILADLDTMKHKMRQLKGRRVAACQPTTMVPNKSPLQPVVVEGGWTEQTQEEIKLMDLIRHTEQAYFSGVQELQSKRNSPIAPKCRTLKKSSLYKQPNAKRVWVYLNGGRPEDGTFARGKTISELLDDCSSRLKLAHPARTLYTPEGEPIHSWDDIERDMVICVTTGHGFITPKELKQLVEVRANYARICRQQGPQATDIVLSPSAKLQSLASLKNTRELPSKELLI", "length": 1824, "header": "tr|A0A5G2R2R1-1|F1SGP1_PIG Computationally mapped isoform of Doublecortin domain containing 1 OS=Sus scrofa OX=9823 GN=DCDC1 PE=4 SV=1 CANONICAL=F1SGP1-1" }, "locus": { "chromosome": "2", "start_pos": 29792817, "end_pos": 29384227, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081078.1", "url": "https://www.ensembl.org/id/ENSSSCT00000081078.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070626.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070626.1" } ] } }, { "isoform_ac": "F1SGP1-1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1/entry#F1SGP1-1", "sequence": { "sequence": "MAEEHRAALSQVPLSPLTKAKEVSQLSSPEGAFSGDTVHPIYKYISNDLPREFMSFQAKAVIKTTEDYLQFGPSRLLHSAAVSEGSGLQDCSRHQTASDHSYNEISDPDSCKSNSKNNSCFISASKRNRPVSAPVGQLRVAELSSLKSKLDQNWHKLSQRHKLQPRVIRVTAYKNGSRTVFAKVTVPTITLLLKECTEKLNLNMAARRVFLADGTEALKPEDIPHEADVYVSTGEPFLDPFKKIKDHLLLMKKVTWTMNGLMFPTDIKRRKTKPVLSSRMKKLTEKTSARILFFKNGMGQDGHEITVGKETMKKVLDICTMRMNLNSPARYLYDLYGRKIKDISKVPLLEKCLQNSITPLRGPVWVSKGEGFSPSGAKMYIQGVLLALYQRLKSAKKFYKQLNLAADEQKGKITEKVILSMTAKEHHQAQEEVNRLIDELQTAIKSHRGHLSKLGPQLQAEQEQFSSYVYQHIKSLPANTLIPGGLQLKIFESGKDTGEISVYISKKDLGPNNPSQTGHMMERLLLKIHQRLQGSSINPPSLNFSSARLFDEHGQEIKNPLLLKNEQKIWVSYGKAYRSPLHPVLGLTFDRVTAFARGGIIVAYKTFLDPNAVLLPGCDNWEICEGFPVNLNGTSQQMPDQFETVNSENHFLQNKADPNMVLHASVSIRKQSFSSSEESSGSQKAPLTLWPAASVWLITKTGMILSRAITQGCLAIGHPIRLKAAEGTSLEGYKLILQKRNKGDDSQKWIFGIDSCIYSKAYPQFVLTYLEELNAQVDVTQTEYHLHHGAWTAAHWEHGSSVAEEVLQSSASIPGLKQLPEPSDAHLMPEGSLGETGQLTVALVRKLEEKHPKASAQRWSIKHEGTGKPGQWKHSRVENPLWNKLTYMWPVLPSGQLNEEFDWPIEGLLLPNSPPMKKPICKTPKQYVPVRLRVLQNGDKNKTRALTIISPGKSPEQKMQCTEILNLPSAARRLFNEKGKEIFNLKDLQRDELVYVSCGEHWINPDLSIAQQKKQIFLRNLASDISKIHTFCSTHKIEALVLEVQSDIVAGAKLAVHKPVPGEEKQIIEPEEKQMQKNALTTENASSEILDSHARAHLRVKACHTLLRYAWQETSHNFDEDDSLPKKTEEELFENMELENKYSHSPKQSKLQKLRRQQFEYRDGQIISCAAPQLVLGVQSPNPHSGTEVVLVDKKADDSHQRWLHEEDSRTFHLVSNPDLVLAVSMTKARDDACGYPVIAQKYKPYDNGTSNQKWNYLKNKKAFMAFHSTAMDKEITAANYAGICTSSVIKEENIDQPGYYYVSPNGKRKIMLCLACGQSMRAEKGLKQLLPGQPFLCASGSKTQKPFSRGPFKVISVAKADLSSDEAENTLSYYEECLLSLRMKTCSQVVSHSSMAVIHQKAVKIIAYKNGDGYRNGKLIVAGTFPMLLTECTQQLGLARAASKVYTKDGTTILSLRDLVLWALDESFIQRDSEEKKKETAPDGTKETRVKNIEVNSRMKMKNKSFPKSVTSDSLDGIDKSLLTLILRNPIAIWVSCGEPFLSPNALQRAEKIGKQNWQKKDKILADLDTMKHKMRQLKGRRVAACQPTTMVPNKSPLQPVVVEGGWTEQTQEEIKLMDLIRHTEAYFSGVQELQSKRNSPIAPKCRTLKKSSLYKQPNAKRVWVYLNGGRPEDGTFARGKTISELLDDCSSRLKLAHPARTLYTPEGEPIHSWDDIERDMVICVTTGHGFITPKELKQLVEVRANYARICRQQGPQATDIVLSPSAKLQSLVTLHSEFLSQTS", "length": 1785, "header": "tr|F1SGP1-1|F1SGP1_PIG Isoform 1 of Doublecortin domain containing 1 OS=Sus scrofa OX=9823 GN=DCDC1 PE=4 SV=5 CANONICAL=F1SGP1-1" }, "locus": { "chromosome": "2", "start_pos": 29779945, "end_pos": 29384227, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014553.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014553.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014158.5", "url": "https://www.ensembl.org/id/ENSSSCP00000014158.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R2R1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R2R1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F1SGP1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F1SGP1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1" } ], "pmid": "" }, { "name": "regulation of mitotic cytokinesis", "id": "GO:1902412", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902412", "evidence": [ { "database": "UniProtKB", "id": "F1SGP1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "F1SGP1", "url": "https://www.uniprot.org/uniprotkb/F1SGP1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1084, "end_pos": 1086, "annotation": "n_glycosylation_sequon" }, { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1248, "end_pos": 1250, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1504, "end_pos": 1506, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1595, "end_pos": 1597, "annotation": "n_glycosylation_sequon" }, { "start_pos": 175, "end_pos": 177, "annotation": "n_glycosylation_sequon" }, { "start_pos": 543, "end_pos": 545, "annotation": "n_glycosylation_sequon" }, { "start_pos": 632, "end_pos": 634, "annotation": "n_glycosylation_sequon" }, { "start_pos": 941, "end_pos": 943, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SGP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGP1" }, { "id": "PS50309", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50309" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Doublecortin", "eco_id": "ECO_0000259", "start_pos": 173, "end_pos": 240, "start_aa": "Tyr", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1084, "end_pos": 1086 }, { "start_pos": 117, "end_pos": 119 }, { "start_pos": 1248, "end_pos": 1250 }, { "start_pos": 1504, "end_pos": 1506 }, { "start_pos": 1595, "end_pos": 1597 }, { "start_pos": 175, "end_pos": 177 }, { "start_pos": 543, "end_pos": 545 }, { "start_pos": 632, "end_pos": 634 }, { "start_pos": 941, "end_pos": 943 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SA16-1", "uniprot_ac": "F1SA16", "uniprot_id": "F1SA16_PIG", "mass": { "chemical_mass": 39471.0, "monoisotopic_mass": 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"https://www.uniprot.org/uniprotkb/F1SA16/entry#A0A8W4F8G0-1", "sequence": { "sequence": "KLTILNLIKQILGAMESQVAGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 366, "header": "tr|A0A8W4F8G0-1|A0A8W4F8G0_PIG Computationally mapped isoform of ELAV-like protein OS=Sus scrofa OX=9823 GN=ELAVL3 PE=1 SV=1 CANONICAL=F1SA16-1" }, "locus": { "chromosome": "2", "start_pos": 70126654, "end_pos": 70117602, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100633.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100633.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075599.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075599.1" } ] } }, { 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"categories": [ "Protein Classification" ] }, { "id": "PF15391", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15391", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005661251", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661251", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S9W4", "url": "https://www.uniprot.org/uniprotkb/F1S9W4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9W4-1", "url": "https://www.uniprot.org/uniprotkb/F1S9W4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASIRKPSRPVSNIFGDFSDISLEDSKVEEIQNLGISRSLTKIAPSQSRFLKRNQTVGGRHLSPKENAVLGSGPWPSSGRPLTMASKVRANAALTKLAQIESKIRNRKVQMALSHVESDLKTSEDMLPSGADDIPPRRPGDLSSQNTDKTSWTQTREILVSEGDKPSGKVSKFLKKREALVEKISPKAHAGKERNFQTLKEKKPPRKLDSPDSDEEEMKELLGSLMESPREKNTATNQGFTSTRVSEEQQIKLFSDQTPTQPRVLSLPSKDLSSSKPFWTSRVPTSQSADGILRSTGSRNCSPQTHISDDTAPHKASISTPGTFPKSLPSTVGDGKLSSPPRWSEAGPLEESPSAATDDSLNDFRINILSLDDLSPAVSEKPDFEQKKDGQREKASSRSPWVGSPSSGSEVSEHLSERSALSAGSKGVSGPGPMSQEPLASSESFSYSEDFEKSPSPTTASELTAHSEESPDRTLATRSEFSASLETALPPPTPKSQKKRTRGVARVMVKETAVQTPDPAFIYQWTKAASVAAIGPALGGAYVDPAPIASHVISADAIEALTAYSPAVFALNDMLKQQLNLTQQFIEASRHLHASLLHSLDRDSFHYHTLEETKEYIRQHRPTPLTMEEALEEVKKEL", "length": 638, "header": "tr|F1S9W4-1|F1S9W4_PIG Isoform 1 of Chromosome 2 C19orf44 homolog OS=Sus scrofa OX=9823 GN=C19orf44 PE=4 SV=3 CANONICAL=F1S9W4-1" }, "isoforms": [ { "isoform_ac": "F1S9W4-1", "url": "https://www.uniprot.org/uniprotkb/F1S9W4/entry#F1S9W4-1", "sequence": { "sequence": "MASIRKPSRPVSNIFGDFSDISLEDSKVEEIQNLGISRSLTKIAPSQSRFLKRNQTVGGRHLSPKENAVLGSGPWPSSGRPLTMASKVRANAALTKLAQIESKIRNRKVQMALSHVESDLKTSEDMLPSGADDIPPRRPGDLSSQNTDKTSWTQTREILVSEGDKPSGKVSKFLKKREALVEKISPKAHAGKERNFQTLKEKKPPRKLDSPDSDEEEMKELLGSLMESPREKNTATNQGFTSTRVSEEQQIKLFSDQTPTQPRVLSLPSKDLSSSKPFWTSRVPTSQSADGILRSTGSRNCSPQTHISDDTAPHKASISTPGTFPKSLPSTVGDGKLSSPPRWSEAGPLEESPSAATDDSLNDFRINILSLDDLSPAVSEKPDFEQKKDGQREKASSRSPWVGSPSSGSEVSEHLSERSALSAGSKGVSGPGPMSQEPLASSESFSYSEDFEKSPSPTTASELTAHSEESPDRTLATRSEFSASLETALPPPTPKSQKKRTRGVARVMVKETAVQTPDPAFIYQWTKAASVAAIGPALGGAYVDPAPIASHVISADAIEALTAYSPAVFALNDMLKQQLNLTQQFIEASRHLHASLLHSLDRDSFHYHTLEETKEYIRQHRPTPLTMEEALEEVKKEL", "length": 638, "header": "tr|F1S9W4-1|F1S9W4_PIG Isoform 1 of Chromosome 2 C19orf44 homolog OS=Sus scrofa OX=9823 GN=C19orf44 PE=4 SV=3 CANONICAL=F1S9W4-1" }, "locus": { "chromosome": "2", "start_pos": 61099540, "end_pos": 61083955, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059218.2", "url": "https://www.ensembl.org/id/ENSSSCT00000059218.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037331.1", "url": "https://www.ensembl.org/id/ENSSSCP00000037331.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 458, "start_aa": "Thr", "end_pos": 458, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr458", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 493, "start_aa": "Thr", "end_pos": 493, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr493", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S9W4", "url": "https://www.uniprot.org/uniprotkb/F1S9W4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102160745", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102160745", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3H4H2-1", "protein_name": "Uncharacterized protein C19orf44 homolog isoform X1", "gene_name": "C1H19orf44", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MREEINAGTELTSQMASTRRLIGPPRGVFDFSDMFLEDSRMEDIRNIQAQSLGQVTPGQNRILKRNQRMDEKYLMSKEEAMLGKGPRLGLRPPTITSKTRANEALRKLAQIETKIRSRKQTSMALSDTESDSKTTELHLPKGKDAASAAPSEHPHRTFQKQVCKTPTTKSNGQNGKGSRFLKKKEPSIEARSPVPTVEKGKHIPPPRQKEPARKCDAPDSDEEEIKALLGSLMDSSREEETNRNHQLTSTKVSMIDHGKLSSDQTSTQPGVPSLLSVDCSSSKPSRLFYRLDSPWTLNTGDTVSLTSSPSVTNDLSKSASSKMGCIKLASSPSRSEGRSSEEPVSEAADDSLHDFRINILSIDDLVLADGEKSDVEQKEEGSGWEGMSGRGSPPMSSSRLEEQGPPQHKSSALEGTATAVADEEGLATEVSEHLADSSAETVQSHSMSCMQFVEALTALTASPAYSEDFEPSSRSLASEASLGRTQDTLSQYSSRGQTGLLSRRSLSRTQWGQGVTRVVKETAVQTLDPAFVYQWSKAGGMAAIGPTLGGAYVDPAPIASHVVSADAIEALTAYSPAVLALNDMLKQQLSLTQQFTEASRHLHMSLLQSLDGDSFHYHTLEETKEYIRCHRPAPLTMEAALQEVKEELKS", "length": 650 }, "evidence": [ { "id": "F1S9W4", "url": "https://omabrowser.org/oma/group/F1S9W4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9H6X5-1", "protein_name": "Uncharacterized protein C19orf44", "gene_name": "C19orf44", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASARKASRPMRDVFGDFSDVSLEDSTMEEIRNFQISRNLTKIAPGHSRFLKRNQTLDEKHLLLKENPVLGSGPRLASCRPPTTASRIRANAALMKLAQLETRIMNRKLQRNLSDTESDSMTADAGLPKRADRILSGGALELASQNTDKTSQNQARELPVTENNAQNAKVSRFLKKKQAPVENISPEAPAGKERTLQTPKQKEPARTFDSPDSDEEEMKVLLGSLMDSSREKNTNQGFSSANVSEEEERKLFSVPSQLRAFTVPSVELSSAKPSQTSHLPTSLAADRTLHSTRSRADYPQSHVSSDTASHTPSVSITGAFSNSVSLKMGHVKLVSSPGRSEAETVDEPVSEGADDSLDEFRINILSLDGLAPAVSENSDLEQEEESAQRQKTAGKIFRAEASTGQDAPRQAQARSWASQGKAASAEGDESEVSEHLSASSASAIQQDSTSSMQPPSEAPMVNTVSSAYSEDFENSPSLTASEPTAHSKESLDRTLDALSESSSSVKTDLPQTAESRKKSGRHVTRVLVKDTAVQTPDPAFTYEWTKVASMAAMGPALGGAYVDPTPIANHVISADAIEALTAYSPAVLALHDVLKQQLSLTQQFIQASRHLHASLLRSLDADSFHYHTLEEAKEYIRCHRPAPLTMEDALEEVNKEL", "length": 657 }, "evidence": [ { "id": "F1S9W4", "url": "https://omabrowser.org/oma/group/F1S9W4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 300, "end_pos": 302, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" }, { "start_pos": 580, "end_pos": 582, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1S9W4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9W4" }, { "id": "PF15391", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15391" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF4614", "eco_id": "ECO_0000259", "start_pos": 446, "end_pos": 622, "start_aa": "Ser", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 458, 493 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 300, "end_pos": 302 }, { "start_pos": 54, "end_pos": 56 }, { "start_pos": 580, "end_pos": 582 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S9X9-1", "uniprot_ac": "F1S9X9", "uniprot_id": "F1S9X9_PIG", "mass": { "chemical_mass": 40139.0, "monoisotopic_mass": 40139.0 }, "refseq": { "ac": "NP_001230755", "name": "hematopoietic SH2 domain-containing protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230755" }, "gene_names": [ { "name": "HSH2D", "type": "recommended", "evidence": [ { "id": "F1S9X9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9X9" } ] }, { "name": "HSH2D", "type": "synonym", "evidence": [ { "id": "NP_001230755", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230755" } ] } ], "protein_names": [ { "name": "Hematopoietic SH2 domain containing", "type": "synonym", "evidence": [ { "id": "F1S9X9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9X9/entry#names_and_taxonomy" } ] }, { "name": "hematopoietic SH2 domain-containing protein", "type": "synonym", "evidence": [ { "id": "NP_001230755", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230755" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S9X9", "url": "https://www.uniprot.org/uniprotkb/F1S9X9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HSH2D", "url": "https://www.uniprot.org/uniprotkb/F1S9X9", "locus": { "chromosome": "2", "start_pos": 61418055, "end_pos": 61427144, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013853", "url": "https://www.ensembl.org/id/ENSSSCG00000013853" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013853", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013853", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511370", "url": "https://www.ncbi.nlm.nih.gov/gene/100511370", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000980", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000980", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036860", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036860", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511370", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511370", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CGQKDPA", "url": "https://omabrowser.org/oma/group/CGQKDPA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1S9X9", "url": "https://www.orthodb.org/?gene=F1S9X9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14388", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14388", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14388:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14388:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00017", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00017", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001230755", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230755", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S9X9", "url": "https://www.uniprot.org/uniprotkb/F1S9X9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9X9-1", "url": "https://www.uniprot.org/uniprotkb/F1S9X9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTEDRRLPPPLPPRLDWFIHTQVDQLAQGGVPAWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQNCCRHFMVKLLDDGSFVIPGEDRVYASLDALVAFHQQQPVRPHEDLLTQPCQQKDPANMDYEDLFLYSNALTKEATWSTYGPSKHQNPSCPMATPEEDSAKPVLLHRPKERKPATELVGTSTEEATPSCPSKAPLEETRQKLWRNLKMLPQTGKKVQQHLKSHLGAVSSSSRSDTRASVVTHSSRAGAGNSAWEENMYTDHFEATSLAGPSQPQPPRDRGDPPRKALRSISWSEATTRVRSWHQEVMRALSSSQASKPEPIGSKGPQDWLPEEYHQPPPFAPGYC", "length": 359, "header": "tr|F1S9X9-1|F1S9X9_PIG Isoform 1 of Hematopoietic SH2 domain containing OS=Sus scrofa OX=9823 GN=HSH2D PE=4 SV=1 CANONICAL=F1S9X9-1" }, "isoforms": [ { "isoform_ac": "F1S9X9-1", "url": "https://www.uniprot.org/uniprotkb/F1S9X9/entry#F1S9X9-1", "sequence": { "sequence": "MTEDRRLPPPLPPRLDWFIHTQVDQLAQGGVPAWFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQNCCRHFMVKLLDDGSFVIPGEDRVYASLDALVAFHQQQPVRPHEDLLTQPCQQKDPANMDYEDLFLYSNALTKEATWSTYGPSKHQNPSCPMATPEEDSAKPVLLHRPKERKPATELVGTSTEEATPSCPSKAPLEETRQKLWRNLKMLPQTGKKVQQHLKSHLGAVSSSSRSDTRASVVTHSSRAGAGNSAWEENMYTDHFEATSLAGPSQPQPPRDRGDPPRKALRSISWSEATTRVRSWHQEVMRALSSSQASKPEPIGSKGPQDWLPEEYHQPPPFAPGYC", "length": 359, "header": "tr|F1S9X9-1|F1S9X9_PIG Isoform 1 of Hematopoietic SH2 domain containing OS=Sus scrofa OX=9823 GN=HSH2D PE=4 SV=1 CANONICAL=F1S9X9-1" }, "locus": { "chromosome": "2", "start_pos": 61424668, "end_pos": 61418176, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015132.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015132.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014727.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014727.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 200, "start_aa": "Thr", "end_pos": 200, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr200", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1S9Z3-1", "uniprot_ac": "F1S9Z3", "uniprot_id": "F1S9Z3_PIG", "mass": { "chemical_mass": 81840.0, "monoisotopic_mass": 81840.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF839", "type": "recommended", "evidence": [ { "id": "F1S9Z3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3" } ] } ], "protein_names": [ { "name": "Zinc finger protein 839", "type": "synonym", "evidence": [ { "id": "F1S9Z3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1S9Z3", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF839", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3", "locus": {} } ], "crossref": [ { "id": "F1S9Z3", "url": "https://alphafold.ebi.ac.uk/entry/F1S9Z3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000002532", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002532", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039946", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039946", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CQDYLSG", "url": "https://omabrowser.org/oma/group/CQDYLSG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16116", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16116", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16116:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16116:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15961", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15961", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1S9Z3", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S9Z3-1", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPALATLQPTTARPGQTPRKQCSVLGLSVASSQLLRAQPLPSAGPQPCLLSHSPQPPVQVIVRRPLPALRPVPAKRVLVTEAPSGQDTMVAPPSASDPPTATPVPSSSANVSIPNSHTQHTAKLKKSLKVKTRSGRISRPPKYKAKDYKFIKTEDLADSHPSDSDDYSELSVEEDEDQREKQELFDLSSCSLRPKAFKCQTCEKSYIGKGGLARHLKLNPGHGPLEPEMLPSEKATAGSLTPGPSGGRSAGLASRGLAMPALRDGGARSARGGLQNGQSIDVEEALTSEPESGSFSALLGSERHPRPGRSGCSVAPAEPCEAVLEQSRAARPSVGASAAGVQSTARNRARLLEFLHQCDRADLVELALPQLAQVVTVYEFLLMKVEKGHLAKPFFPAVYKEFEELHTMVKKMCLDYLQSSGPCSQETLEINNSKVAESLGITEELLRRRGIHADGLAPERSRGEVDTGEPEAPGRRKREDETAEAGLPSAKRARPGTRPRDTPERSAPGGGLQARAACTPAAGEGLAPGGSGDACHPSEESPTRPTSERESSAAQAGQQLSASADSAAGSGPTDPAVPSRDAGGPGLSSRLGDPGTPAWEHSPERDTRDSLGSASTALLPGRSGNAAAGNPREMLDPHLSEVLLPGAPPLGTAWSVDIVPAACACSPVSQPGLQPSRGGSLCPTGGLGSHDGDVDQSPCGTEAQADQRGLESIVAIGEAMAFEISSGCHEVLSQGQGQVFIQTSDGLILSHPGSIVSGEGDIVIVTDSDGPALQMGPPEPVEAAPSQ", "length": 787, "header": "tr|F1S9Z3-1|F1S9Z3_PIG Isoform 1 of Zinc finger protein 839 OS=Sus scrofa OX=9823 GN=ZNF839 PE=4 SV=3 CANONICAL=F1S9Z3-1" }, "isoforms": [ { "isoform_ac": "F1S9Z3-1", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3/entry#F1S9Z3-1", "sequence": { "sequence": "MPALATLQPTTARPGQTPRKQCSVLGLSVASSQLLRAQPLPSAGPQPCLLSHSPQPPVQVIVRRPLPALRPVPAKRVLVTEAPSGQDTMVAPPSASDPPTATPVPSSSANVSIPNSHTQHTAKLKKSLKVKTRSGRISRPPKYKAKDYKFIKTEDLADSHPSDSDDYSELSVEEDEDQREKQELFDLSSCSLRPKAFKCQTCEKSYIGKGGLARHLKLNPGHGPLEPEMLPSEKATAGSLTPGPSGGRSAGLASRGLAMPALRDGGARSARGGLQNGQSIDVEEALTSEPESGSFSALLGSERHPRPGRSGCSVAPAEPCEAVLEQSRAARPSVGASAAGVQSTARNRARLLEFLHQCDRADLVELALPQLAQVVTVYEFLLMKVEKGHLAKPFFPAVYKEFEELHTMVKKMCLDYLQSSGPCSQETLEINNSKVAESLGITEELLRRRGIHADGLAPERSRGEVDTGEPEAPGRRKREDETAEAGLPSAKRARPGTRPRDTPERSAPGGGLQARAACTPAAGEGLAPGGSGDACHPSEESPTRPTSERESSAAQAGQQLSASADSAAGSGPTDPAVPSRDAGGPGLSSRLGDPGTPAWEHSPERDTRDSLGSASTALLPGRSGNAAAGNPREMLDPHLSEVLLPGAPPLGTAWSVDIVPAACACSPVSQPGLQPSRGGSLCPTGGLGSHDGDVDQSPCGTEAQADQRGLESIVAIGEAMAFEISSGCHEVLSQGQGQVFIQTSDGLILSHPGSIVSGEGDIVIVTDSDGPALQMGPPEPVEAAPSQ", "length": 787, "header": "tr|F1S9Z3-1|F1S9Z3_PIG Isoform 1 of Zinc finger protein 839 OS=Sus scrofa OX=9823 GN=ZNF839 PE=4 SV=3 CANONICAL=F1S9Z3-1" }, "locus": { "chromosome": "AEMK02000452.1", "start_pos": 1137184, "end_pos": 1125702, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002812.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002812.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002741.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002741.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 573, "start_aa": "Thr", "end_pos": 573, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr573", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 596, "start_aa": "Thr", "end_pos": 596, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr596", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S9Z3", "url": "https://www.uniprot.org/uniprotkb/F1S9Z3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z029-1", "protein_name": "Zinc finger protein 839", "gene_name": "ZNF839", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPEEGGTEAPPRPPPPAEGEPPGAACGATLGAAAAEESGGLPPPVELRAVPEELARSLAALEGGTVLYVQAEGAGPSAEEQPPSPSRHAATPLAPAELRRVIERVSRARELREASPPLRDGGPEPPPPPAAVVQNAALQLRSVAQRVALQRGAALAPARLLPRQQLETICVQVQPGQMKETERPVPSLAPIQSKTVMLSQSVGRNSSVPGLGIINPQIIKIQPVTGPEQQQQLFLHSSSESPIQLLMQKPLPSHGSVPVNKIPTSKVLNGQKTARATVSPARSSNTAASSTNTLMPCLEKKQKDDKLKKSLKVKTRSGRISRPPKYKAKDYKFIKMEDLADSHQSDSDDYSELSIEDDEEGKVKGKDALFNSSNYNLKPKMFKCQTCEKSYIGKGGLARHYKLNPGHGQLESVPQKTPLNKPNGSIFVDNLCGIGEEIMSPVHLNSIAVTLKNENALPANLEETAGSQVEQACKSAESGNLLAEQQNESSSGHRGPITAKGPGRPRRPKRRGRPRMGGRSRCSGRLSRPGQSPSKSLSSVSTERNVFRRKARLKELIQQCDNEDLMELALPRLTELVTVYEFLLMKVEKGCPAKAYFPDVYREFEELHNMVKKMAYDYLSNSDFLSCQQPIEIKDTKVAESLGITEITTGEQKMQGVDPCSQHIIKMVSEQVPVETLGEKRLAESSGEELLPSAKRTKLEDVMENVNNAYSSQDEVKEKSGNLCTLFEKDGLNPLNGEILLPEDRRVTCCTTGSMLPAEEERNLLVDSEVRINDENSGTFSQTVEMRIEYSQPVDRQGPGISADASLLHTEIVLPVEAGCSPELAEAHLVSQNTAGGLSASEPCNSVSERAVGIQSTALAMSEENGLNQKCQTPQEESQNFAMKGQSEQLHDAGMTQMQEMEKAFSTHVPINYPHGAQAELHQNPVQEASLSAGVNHDCAYNNVSEFPCGTEEQHELENAVAVDQTVAFEITDGSHDFLTQGHEQIFIQTTDGLILSHPDAAVLSQAEGIVIVTDSDGTTMHIRTPDGIPLETVEALLAMEADGQSEDVLLSQSELEP", "length": 1060 }, "evidence": [ { "id": "F1S9Z3", "url": "https://omabrowser.org/oma/group/F1S9Z3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A8K0R7-1", "protein_name": "Zinc finger protein 839", "gene_name": "ZNF839", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLLPTTIQPQTARKSQLPRGNSCLVGLHIASPQLLRVQPLVRTEPQSCFLSDLCQPPAQGFVQRPLPALQVVPAKRVPAPKAPDEQGSMLTPLSASDPLAVTSLSSSSAHPFISNLHTRHTEKLKKSLKVKTRSGRVSRPPKYKAKDYKFIKTEDLADGHLSDSDDYSELCVEEDEDQRERHALFDLSSCSLRPKSFKCQTCEKSYIGKGGLARHFKLNPGHGQLDPEMVLSEKASGSTLRGCTEERTLSLTSLGLSMPADPCEGGARSCLVTESARGGLQNGQSVDVEETLPSEPENGALLRSERYQGPRRRACSETLAESRTAVLQQRRAAQLPGGPAAAGEQRASPSKARLKEFLQQCDREDLVELALPQLAQVVTVYEFLLMKVEKDHLAKPFFPAIYKEFEELHKMVKKMCQDYLSSSGLCSQETLEINNDKVAESLGITEFLRKKEIHPDNLGPKHLSRDMDGEQLEGASSEKREREAAEEGLASVKRPRREALSNDTTESLAANSRGREKPRPLHALAAGFSPPVNVTVSPRSEESHTTTVSGGNGSVFQAGPQLQALANLEARRGSIGAALSSRDVSGLPVYAQSGEPRRLTQAQVAAFPGENALEHSSDQDTWDSLRSPGFCSPLSSGGGAESLPPGGPGHAEAGHLGKVCDFHLNHQQPSPTSVLPTEVAAPPLEKILSVDSVAVDCAYRTVPKPGPQPGPHGSLLTEGCLRSLSGDLNRFPCGMEVHSGQRELESVVAVGEAMAFEISNGSHELLSQGQKQIFIQTSDGLILSPPGTIVSQEEDIVTVTDAEGRACGWAR", "length": 811 }, "evidence": [ { "id": "F1S9Z3", "url": "https://omabrowser.org/oma/group/F1S9Z3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E9PUU5-1", "protein_name": "Zinc finger protein 839", "gene_name": "Zfp839", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGAEPESGNVGDSGSTLPGRSHGAVRLAPLDPEQLRRVLEQVTRAQPPPSTLPAAARRLRDGAQQAQRGPGAEAPRLLTPQELEAICVKVSGDTKLQERTMHPLATIQLKTARQSQLPGRSPSKGVCVSSPQLLRVQALGRTESQLQFLRRSPQPPAPRVFVQKMLPDLHPVPLKRAKAHETASGCGIALSPVAASGTRAVAAVPSSLLISSLHTARTEKSKKSLRVRTRSGRVSRPPRYKARDYKFIKTEDLAEGRLSDSDDYSELSVEEEEEPPEKPAFFDVEVCALRPKAFKCHTCGKSYIGKGGLSRHCKLNPGHSRLQPGVLLLEKADGGPTLGCTDSKTGGLAGPEPSTAAALCVEEAESAWHTLQSGQPVEVEETLVPEPQNRSTSALLRPEKYLGPKNRNWESQAEVSTASLRESRAVQPEGDPAVPSGLSVSGGAQLREALKQCGREELVELVLPQLAQVVTLYELLLVKVEKSPRAKPFFPAVYKEFEELYDMMKRMCQDYLSSAGAYPQEPLEISNDEVARSLGITEFLRRKETPTCSSQETEGRLEKGCVRKRARELGKLATVKKPRTVALPTDVPGYPPSANGCQQEPGPSPALATSKGSDPAAGENSLCSEGSCWEMVPASDRNAPPAGSWLLVMASDDFEARNGSADPTLLFQDVSGSALYSQVAEPSRMHPAQESVFSEENIPEHTMYQDSGAVWKSNSVCDMPSSGRRIGSLLFRESENAEAGALRETNQPFLDGQQASPSHVLLAEAAAVPLHNTVPVNILLPAACVSKIMPEPVLHPGPGGSLSTDGGPSVGREAGDISQPLSRMETHDQREPETVTAVGEALAFDISNVYQEVLSQGQEQIFIRTSNGFILSYPSTIVSQEDDSVVVTNARGSILRFGPPEGVALEAMEAFLTVEAECSQ", "length": 921 }, "evidence": [ { "id": "F1S9Z3", "url": "https://omabrowser.org/oma/group/F1S9Z3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1M2B6-1", "protein_name": "Zinc finger protein 839", "gene_name": "Zfp839", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGAEPEPGEVGGSGSTLPGRSHGTVRLAPLDPEQLQRVLKQVTRAQPPPSVLSDAGRRLPDGARQTAQQRGPGAEAPRLLTPQELEAICVKVSGDTKIKERAMPPLATIQPKTVRQSQLPGGSSSMGVSASSPQLLRVQALGRTESQPRTCRGSLQPPAPQALVQRVSKRVKAHRTAHGRGITLSPVAASGPHTLAAVSSGSARLLISSLHTAHTEKSKKSLRVRTRSGRVSRPPRYKARDYKFIKTEDLAEGHLSDSDDYSELSVEEEEELREKPAFLDLEVCALRPKAFKCQVCEKSYIGKGGLARHCKLNPDHCQLQPEALLCGKANGSPTLGCSDSKTRGLACLKPSIPATHCMEEAGSAWPTLQNGEPVEVEETLVPEPQNRSPSALLRPEKYLKPKSGNWESQAEFSTASLQESRAVQPNSHPAGPSGLSVSRGAELREALRQCGREELLGLVLPQLAQAVTLYELLLVKVEKSPRTKPFFPAVYKEFEQLYDVVKRMCQDYLSSSGACSQEPLEINNDEVARSLGITEFLRKKETPKCSSQETEGKLEEGSGRKRERELGALATGEGLATVKKPRTVALPTDVPEYLPSTSGCQQKSKSSRAPAISKGSEPAATECSLCSEGSCREMVPDSDGNGPPVGQRHPVMAPDDFEARNSSADPTLVCQDVSGSVLHSLVAEPRGMPAARESVFSEETAPEHTIDEDSVALRKSNSVCDTPSLGGRVELRESGTAEAGDLRETDQTHLSGQQAIPSHALLAEAAAVPLHSILPANTLPAACVSKIVPEPEPVLHPGPGGSLCTSGDPRVGSDAGDISQLLSRMETHGQRETETAAAIGEPLAFDISDVCQEVLSQGQEQIFIRTSNGFILSYPSTIVSQEEDSVIVTNATGSILRFGPPEGVTLEAMEAFLTVEAECSQ", "length": 922 }, "evidence": [ { "id": "F1S9Z3", "url": 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"https://www.uniprot.org/uniprotkb/A0A5G2RMI1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA32", "url": "https://www.uniprot.org/uniprotkb/F1SA32", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA32-1", "url": "https://www.uniprot.org/uniprotkb/F1SA32-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASKNSSLIHGLFWLLLHFGWIWVALFFSDDREGEHFLWDLKAEMLQKGICVAFTEKILTTKRTYGSTDIHFLTRNRVWILVAKWDVVLNEVDSILHSSHGILSFSLQKRKIPGFQHFLKTVNPSQYPENFYLCIIWFKIFTHSLAGSLRGKVNDCLPNSSLEFMPMNIDVMTMSDSNYFIYNAVYAVVQTLHEMLLHLLFFGCKENQFDVLQPFLDKIQFRNSAGEHISLDEKRYHVVKYDIMNIVSFPGGLGFLVKGGESGSSGLYDQGLVINKEMIEWPTGFKETPQSVCSQSCSSGFRKIPQEEINMCNAQQKEIFLFTITFKCGKNEMFESFSTDAEQCRNHCLPKVLTFLAFEDSMGMSLTCMVLCFFVITAVILLIFANNWALSYVLLISLLLGFLCPLLFIGRPSTATCILRQITFGALFTVAVATVLAKTLTVILAFKAMRPGRIMRRLLVTGASNYVIPICFLIQVVICGVWLGTSPPFLEIHTHSEPKNLILMCNKGTITAFYCILGYLGFLALRSFSLAFLARSLPDTFNESKFLTFSMLVFYSVWVTFLPIHHSNKGKAMVAMEIFSILGPNAGLLGCIFVPKCYIILLRPDKNSLKGLRNQIGSTRNRHSGFIS", "length": 628, "header": "tr|F1SA32-1|F1SA32_PIG Isoform 1 of G-protein coupled receptors family 3 profile domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=F1SA32-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RMI1-1", "url": "https://www.uniprot.org/uniprotkb/F1SA32/entry#A0A5G2RMI1-1", "sequence": { "sequence": "ILHSSHGILSFSLQKRKIPGFQHFLKTVNPSQYPENFYLCIIWFKIFTHSLAGSLRGKVNDCLPNSSLEFMPMNIDVMTMSDSNYFIYNAVYAVVQTLHEMLLVTTEMGPPGNADQPMLLPWKINLQPFLDKIQFRNSAGEHISLDEKRYHVVKYDIMNIVSFPGGLGFLVKGGESGSSGLYDQGLVINKEMIEWPTGFKETPQSVCSQSCSSGFRKIPQEEINMCNAQQKEIFLFTITFKCGKNEMFESFSTDAEQCRNHCLPKVLTFLAFEDSMGMSLTCMVLCFFVITAVILLIFANNWALSYVLLISLLLGFLCPLLFIGRPSTATCILRQITFGALFTVAVATVLAKTLTVILAFKAMRPGRIMRRLLVTGASNYVIPICFLIQVVICGVWLGTSPPFLEIHTHSEPKNLILMCNKGTITAFYCILGYLGFLALRSFSLAFLARSLPDTFNESKFLTFSMLVFYSVWVTFLPIHHSNKGKAMVAMEIFSILGPNAGLLGCIFVPKCYIILLRPDKNSLKGLRNQIGSTRNRHSGFIS", "length": 542, "header": "tr|A0A5G2RMI1-1|A0A5G2RMI1_PIG Computationally mapped isoform of G-protein coupled receptors family 3 profile domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F1SA32-1" }, "locus": { "chromosome": "2", "start_pos": 70293884, "end_pos": 70282878, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090178.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090178.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073804.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073804.1" } ] } }, { "isoform_ac": "F1SA32-1", "url": "https://www.uniprot.org/uniprotkb/F1SA32/entry#F1SA32-1", "sequence": { "sequence": "MASKNSSLIHGLFWLLLHFGWIWVALFFSDDREGEHFLWDLKAEMLQKGICVAFTEKILTTKRTYGSTDIHFLTRNRVWILVAKWDVVLNEVDSILHSSHGILSFSLQKRKIPGFQHFLKTVNPSQYPENFYLCIIWFKIFTHSLAGSLRGKVNDCLPNSSLEFMPMNIDVMTMSDSNYFIYNAVYAVVQTLHEMLLHLLFFGCKENQFDVLQPFLDKIQFRNSAGEHISLDEKRYHVVKYDIMNIVSFPGGLGFLVKGGESGSSGLYDQGLVINKEMIEWPTGFKETPQSVCSQSCSSGFRKIPQEEINMCNAQQKEIFLFTITFKCGKNEMFESFSTDAEQCRNHCLPKVLTFLAFEDSMGMSLTCMVLCFFVITAVILLIFANNWALSYVLLISLLLGFLCPLLFIGRPSTATCILRQITFGALFTVAVATVLAKTLTVILAFKAMRPGRIMRRLLVTGASNYVIPICFLIQVVICGVWLGTSPPFLEIHTHSEPKNLILMCNKGTITAFYCILGYLGFLALRSFSLAFLARSLPDTFNESKFLTFSMLVFYSVWVTFLPIHHSNKGKAMVAMEIFSILGPNAGLLGCIFVPKCYIILLRPDKNSLKGLRNQIGSTRNRHSGFIS", "length": 628, "header": "tr|F1SA32-1|F1SA32_PIG Isoform 1 of G-protein coupled receptors family 3 profile domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=F1SA32-1" }, "locus": { "chromosome": "2", "start_pos": 70294259, "end_pos": 70282878, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014865.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014865.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014464.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014464.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA32", "url": "https://www.uniprot.org/uniprotkb/F1SA32" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "F1SA32", "url": "https://www.uniprot.org/uniprotkb/F1SA32" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SA32", "url": "https://www.uniprot.org/uniprotkb/F1SA32" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 542, "end_pos": 544, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SA32-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 628, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SA32-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SA32" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SA32", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA32" }, { "id": "PS50259", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50259" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 3 profile", "eco_id": "ECO_0000259", "start_pos": 363, "end_pos": 616, "start_aa": "Gly", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 159, "end_pos": 161 }, { "start_pos": 542, "end_pos": 544 }, { "start_pos": 5, "end_pos": 7 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SA33-1", "uniprot_ac": "F1SA33", "uniprot_id": "F1SA33_PIG", "mass": { "chemical_mass": 38714.0, "monoisotopic_mass": 38714.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "G-protein coupled receptors family 3 profile domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1SA33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA33/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SA33", "url": "https://www.uniprot.org/uniprotkb/F1SA33" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/F1SA33", "locus": {} } ], "crossref": [ { "id": "F1SA33", "url": "https://alphafold.ebi.ac.uk/entry/F1SA33", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013609", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013609", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000068", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000068", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004073", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004073", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017978", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017978", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24061", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24061", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24061:SF545", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24061:SF545", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { 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"isoform_ac": "F1SA33-1", "url": "https://www.uniprot.org/uniprotkb/F1SA33/entry#F1SA33-1", "sequence": { "sequence": "FSLSIDWVFYAEQCVQYPDQEYPNRGRNRCLPKVVTFLAYEDSLGMALVCMALCFCAITAGVLWVFVQHRDTPIIKANNKALSYVLLISLLLCFLCPLLFIGRPNIATCTLRQITFAAVFTVAVVTVSAKTLTVILAFKAMKPGGTMRRLLVTGASNYVIPICSLIQVIICGAWLGTSPPFLEIDTHSEPKSLIIVCIKGSVTAFYCVLGYLGSLALGSFSLAFLARNLPDTFNEAKFLTFSMLVFCTVWVTFFPVYHSTKGKVMVAAEIFSILASSAGIFAPKCYIIFIRHEKNSLKSLRNQIDSKRNRHSGFLSQVPTTVVAFEILSIQINKFLYLFIHILGSIKTT", "length": 349, "header": "tr|F1SA33-1|F1SA33_PIG Isoform 1 of G-protein coupled receptors family 3 profile domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=F1SA33-1" }, "locus": { "chromosome": "2", "start_pos": 70573767, "end_pos": 70545688, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014864.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014864.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014463.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014463.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA33", "url": "https://www.uniprot.org/uniprotkb/F1SA33" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "F1SA33", "url": "https://www.uniprot.org/uniprotkb/F1SA33" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SA33", "url": "https://www.uniprot.org/uniprotkb/F1SA33" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SA33-F1", "pdb_chain": "global", "start_pos": 1, 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"publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA34", "url": "https://www.uniprot.org/uniprotkb/F1SA34" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514703", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514703", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E9Q1J0-1", "protein_name": "Zinc finger protein 558", "gene_name": "Zfp558", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAATIIPLIYAQSSLYPLSPEEGQMGKKGLATEFLTSLLEELVSFEDVTVQFTQEEWALLDPLQRTLYRNVTLENWKNLASLGQHLDKPNLISQLEEEDKVIREDRGIIPGIHPDLEKVLKAKWLTPKNLIFSKEHDNGGKTVQLEERGHHGMKVNECNQCFKVFSTKSNLTQHKRIHTGEKPYDCTQCGKSFRSKSYLTVHRRIHNGEKPFECNHCGKAFSDPSSLRLHVRIHTGEKPYECSQCFHVFRTSCNLKSHKRIHTGGENQHECSQCGKAFSTRSSLTGHNSIHTGEKPFECQECGKTFRKSSYLTQHLRTHTGEKPYECNECGKSFSSSFSLTVHKRIHTGEKPYECSHCGKAFNNLSAVKKHLMTHTGQKPYGCNHCGKSFTSNSYLSVHKRVHNRWI", "length": 407 }, "evidence": [ { "id": "F1SA34", "url": "https://omabrowser.org/oma/group/F1SA34/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { 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"Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA35-1", "url": "https://www.uniprot.org/uniprotkb/F1SA35-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METTLKSVPLKRKKRINEQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDAAMAARPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHHAEVGKALSRQEMQEDLEVAILEAALVMEEEDMVVEDLDMATRKGALEVATMEEEIVEVEFTMILEIITSNLLIMVQ", "length": 257, "header": "tr|F1SA35-1|F1SA35_PIG Isoform 1 of Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F1SA35-1" }, "isoforms": [ { "isoform_ac": "F1SA35-1", "url": 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reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "pmid": "" }, { "name": "catalytic step 2 spliceosome", "id": "GO:0071013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071013", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "mRNA 3'-UTR binding", "id": "GO:0003730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003730", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "pmid": "" }, { "name": "single-stranded telomeric DNA binding", "id": "GO:0043047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043047", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "pmid": "" }, { "name": "mRNA transport", "id": "GO:0051028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051028", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "pmid": "" }, { "name": "regulation of macromolecule metabolic process", "id": "GO:0060255", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060255", "evidence": [ { "database": "UniProtKB", "id": "F1SA35", "url": "https://www.uniprot.org/uniprotkb/F1SA35" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { 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], "gene": [ { "name": "KCTD3", "url": "https://www.uniprot.org/uniprotkb/F1SA91", "locus": { "chromosome": "10", "start_pos": 5815086, "end_pos": 5754156, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010811", "url": "https://www.ensembl.org/id/ENSSSCG00000010811" } ] } } ], "crossref": [ { "id": "F1SA91", "url": "https://alphafold.ebi.ac.uk/entry/F1SA91", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010811", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010811", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18393", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18393", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621684", "url": "https://www.ncbi.nlm.nih.gov/gene/100621684", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003131", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003131", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047825", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047825", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047876", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047876", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621684", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621684", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YFMHSAS", "url": "https://omabrowser.org/oma/group/YFMHSAS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SA91", "url": "https://www.orthodb.org/?gene=F1SA91", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15859", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15859", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15859:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15859:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02214", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02214", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005667973", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667973", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SA91", "url": "https://www.uniprot.org/uniprotkb/F1SA91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA91-1", "url": "https://www.uniprot.org/uniprotkb/F1SA91-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGGHCGSFAAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSISVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKINNTTRSSADSRNGLNFTESEARGGGTQPVVSGTAEEAVRLGFPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLSTSRCATPNISPATSVVQHSRLRESNSSLQLQHHETIHEAATYGSMRPYRESPLLARARRTESFHSYRDFQTVNLNRNVERAVPENGNLGAVQAEVKLAPGECNASERKSPGTEVKNLRESDSGVEVHKIAEGFLEGKKRSSEDENENKLELRRKGGFEGGGFLGRKKVPHLASSPSTSDGGTDSPGTASPSPTKTTPSPRHKKSDSSGQEYSL", "length": 816, "header": "tr|F1SA91-1|F1SA91_PIG Isoform 1 of BTB/POZ domain-containing protein KCTD3 OS=Sus scrofa OX=9823 GN=KCTD3 PE=3 SV=5 CANONICAL=F1SA91-1" }, "isoforms": [ { "isoform_ac": "F1SA91-1", "url": "https://www.uniprot.org/uniprotkb/F1SA91/entry#F1SA91-1", "sequence": { "sequence": "MAGGHCGSFAAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSISVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKINNTTRSSADSRNGLNFTESEARGGGTQPVVSGTAEEAVRLGFPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLSTSRCATPNISPATSVVQHSRLRESNSSLQLQHHETIHEAATYGSMRPYRESPLLARARRTESFHSYRDFQTVNLNRNVERAVPENGNLGAVQAEVKLAPGECNASERKSPGTEVKNLRESDSGVEVHKIAEGFLEGKKRSSEDENENKLELRRKGGFEGGGFLGRKKVPHLASSPSTSDGGTDSPGTASPSPTKTTPSPRHKKSDSSGQEYSL", "length": 816, "header": "tr|F1SA91-1|F1SA91_PIG Isoform 1 of BTB/POZ domain-containing protein KCTD3 OS=Sus scrofa OX=9823 GN=KCTD3 PE=3 SV=5 CANONICAL=F1SA91-1" }, "locus": { "chromosome": "10", "start_pos": 5813951, "end_pos": 5754244, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011827.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011827.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011524.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011524.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 589, "start_aa": "Thr", "end_pos": 589, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr589", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA91", "url": "https://www.uniprot.org/uniprotkb/F1SA91" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621684", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621684", "resource": "KEGG Pathway" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A6H2EG81-1", "protein_name": "BTB domain-containing protein", "gene_name": "Dmel\\CG9467", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSHFTHASSSDLVNLNVGGQRFSTSRQTLTWIPDTFFTALLSGRISSLRDEHNAIFIDRDPTLFSIILNYLRTKDIDIKNCEIRALRHEAEYYGITPLTKRLALCEDLNHSSCGDLLFYGFLAAPPMPSNEAVAATSVDESLPSTSASAIGSRPGSMVRVPEPSRSSHSRNSSWDLRLGRTGSTGNGANPPAPMLHSRNPSIDFMRHSRNSSADLNKVFRNEVGLVFSPTQNSNWVDPLRVQIIKAHQNWIAVAYAHFVTCYRVKDSNGWQQVFTSPHIDATIERIAINSKVNTSAAEPLPSKMVAISYGSQIRLWSIQEGGQKTDVGTFNLNVRVEYLFFIGSQLVALSSSGKIGVWHAMTQHWQIQDLVPVLSFDSAGSFLLLGCNNGSIYYIDMQKFPLRIKDNDLLVTELYKDVTLDPITAISVYLTPKTSSISGNWIEIAYGTKSGAVRIIVQHPETAGHGPHLFETFFVHQSPVTKVMLSEKYLVSVCSEYHHVRTWRLTRFRGMLSTQPGSTPEASFKIVSLEATDTSYSYAAGNDFGPYGDYDDMIFVQKVVPETDQLYVRLASNGDRVCVIRSVDSSTISAFCVLECEVSSRFILTGHCNGAIQMWDLTTALALLSKDEPQQKINGGPDTNELLRLLDQCEISNSSCTTPCMSPCLSAMGNGSGMASSIARMKASNIALLNREPAMAMAVQAVQPPAQVQPALPEAVAPAAAIPMADDNNEXDVEAAAXLALVGRVSSFTFHRYSLIFDYQFIFLQFVVCALIYVWVTRLTRGPATGP", "length": 787 }, "evidence": [ { "id": "F1SA91", "url": "https://omabrowser.org/oma/group/F1SA91/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "D3ZNX0-1", "protein_name": "BTB/POZ domain-containing protein KCTD3", "gene_name": "Kctd3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGHCGSFAAAAASSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSINVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKGTNTARSSVDARNGLSSMEGEARGSGTQPVLAGNGEDTIRLGVPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKSEDKDAGGPTEEELLKLLDQCDLSTSRCATPNISPATSVLQHSRLRESSSSLQLQHHETIHEAATYGATRPYRESPLLARARRTESFHSYRDLQTLNLNRTVERAVPENGHTGPAQAEAKGAAAGECAVCERKSPGTEGRCVREPDVGLDVHRPAEGLSEPKKRSTEDENEPKVEFRKKGFEAGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTTPSPRHRKSDSSGQEYSL", "length": 816 }, "evidence": [ { "id": "F1SA91", "url": "https://omabrowser.org/oma/group/F1SA91/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1C9F1-1", "protein_name": "BTB/POZ domain-containing protein KCTD3", "gene_name": "SHKBP1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGNGGGFAGAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLKDETGAIFIDRDPTAFAPILNFLRTKELDLRGVSINVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKINNTAGPPTDIRTGQNCSENDTHGGGVQPTLAGTGEGTVRLGFPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSIQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDSSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEEAESHGSYCSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHANGSIQMWDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLSTSRCATPNISPATSVVQPNRLRESNSSLQLQHHETIYETATYGSMRPYRESPLLARARRTESFHSYRDFQAFNLSSKSPVEKAAPVNGNSSQTEGRKSTAEGSAAEKAVLTAALEVRGTGLTDAGGCCSTEVHRLPESSLDPKRRGPEEEGEAKGESKKKTGFEGAGFLGRKKVPHLVSAPVLAEGGPELPGAASPSPTKTAASPRHRKNDSSCQDYGL", "length": 819 }, "evidence": [ { "id": "F1SA91", "url": "https://omabrowser.org/oma/group/F1SA91/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8BFX3-1", "protein_name": "BTB/POZ domain-containing protein KCTD3", "gene_name": "Kctd3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGGHCGSFAASAASSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSINVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKVTNTARSSVDARNGLNSMEGEARGNGTQPVLAGNGEDTIRLGVPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAVTALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKTEDKDAGGPTEEELLKLLDQCDLSTSRCATPNISPATSVLQHSRLRESSSSLQLQHHETIHEAATYGATRPYRESPLLARARRTESFHSYRDFQTLNLNRSIERPVPENGHMGPAQTEVKGAAGECAMSERRSPGTEVRCGRESDGGLEVHRTAEGLSEPKKRSAEDENEHKVEFRKKGFEAGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTTPSPRHKKSDSSGQEYSL", "length": 815 }, "evidence": [ { "id": "F1SA91", "url": "https://omabrowser.org/oma/group/F1SA91/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y597-1", "protein_name": "BTB/POZ domain-containing protein KCTD3", "gene_name": "KCTD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGGHCGSFPAAAAGSGEIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNFLRTKELDLRGVSINVLRHEAEFYGITPLVRRLLLCEELERSSCGSVLFHGYLPPPGIPSRKINNTVRSADSRNGLNSTEGEARGNGTQPVLSGTGEETVRLGFPVDPRKVLIVAGHHNWIVAAYAHFAVCYRIKESSGWQQVFTSPYLDWTIERVALNAKVVGGPHGDKDKMVAVASESSIILWSVQDGGSGSEIGVFSLGVPVDALFFIGNQLVATSHTGKVGVWNAVTQHWQVQDVVPITSYDTAGSFLLLGCNNGSIYYIDMQKFPLRMKDNDLLVTELYHDPSNDAITALSVYLTPKTSVSGNWIEIAYGTSSGAVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLVSVCADNNHVRTWTVTRFRGMISTQPGSTPLASFKILSLEETESHGSYSSGNDIGPFGERDDQQVFIQKVVPITNKLFVRLSSTGKRICEIQAVDCTTISSFTVRECEGSSRMGSRPRRYLFTGHTNGSIQMWDLTTAMDMVNKSEDKDVGGPTEEELLKLLDQCDLSTSRCATPNISPATSVVQHSHLRESNSSLQLQHHDTTHEAATYGSMRPYRESPLLARARRTESFHSYRDFQTINLNRNVERAVPENGNLGPIQAEVKGATGECNISERKSPGVEIKSLRELDSGLEVHKIAEGFSESKKRSSEDENENKIEFRKKGGFEGGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTTPSPRHKKSDSSGQEYSL", "length": 815 }, "evidence": [ { "id": "F1SA91", "url": "https://omabrowser.org/oma/group/F1SA91/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SA91", "url": "https://www.uniprot.org/uniprotkb/F1SA91" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein homooligomerization", "id": "GO:0051260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051260", "evidence": [ { "database": "UniProtKB", "id": "F1SA91", "url": "https://www.uniprot.org/uniprotkb/F1SA91" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 141, "end_pos": 143, "annotation": "n_glycosylation_sequon" }, { "start_pos": 154, "end_pos": 156, "annotation": "n_glycosylation_sequon" }, { "start_pos": 335, "end_pos": 337, "annotation": "n_glycosylation_sequon" }, { 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"https://bgee.org/?page=gene&gene_id=ENSSSCG00000015442", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00637", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00637", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100519967", "url": "https://www.ncbi.nlm.nih.gov/gene/100519967", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000276", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000276", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519967", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519967", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VGPSDLM", "url": "https://omabrowser.org/oma/group/VGPSDLM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SAF1", "url": "https://www.orthodb.org/?gene=F1SAF1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24241", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24241", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24241:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24241:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00001", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00001", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005667791", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667791", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SAF1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAF1-1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTAINVFAITLDRYDISVKPANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTWENKTLLCVSTNEYYTELGMYYHLLVQIPIFFFTVIVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHETTDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFKMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLVMGYGTTIFHPLLYAFTRQKFQKVLKSKMKKRVVSIVEADPMPNNAVIHNSWIDPKRNKKIPFEDSEIREKCLVPQVVTD", "length": 433, "header": "tr|F1SAF1-1|F1SAF1_PIG Isoform 1 of G-protein coupled receptor 22 OS=Sus scrofa OX=9823 GN=GPR22 PE=4 SV=1 CANONICAL=F1SAF1-1" }, "isoforms": [ { "isoform_ac": "F1SAF1-1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1/entry#F1SAF1-1", "sequence": { "sequence": "MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTAINVFAITLDRYDISVKPANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTWENKTLLCVSTNEYYTELGMYYHLLVQIPIFFFTVIVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHETTDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFKMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLVMGYGTTIFHPLLYAFTRQKFQKVLKSKMKKRVVSIVEADPMPNNAVIHNSWIDPKRNKKIPFEDSEIREKCLVPQVVTD", "length": 433, "header": "tr|F1SAF1-1|F1SAF1_PIG Isoform 1 of G-protein coupled receptor 22 OS=Sus scrofa OX=9823 GN=GPR22 PE=4 SV=1 CANONICAL=F1SAF1-1" }, "locus": { "chromosome": "9", "start_pos": 107210762, "end_pos": 107209464, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016823.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016823.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016373.2", "url": "https://www.ensembl.org/id/ENSSSCP00000016373.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SAF1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519967", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519967", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M9PMY9-1", "protein_name": "G-protein coupled receptor 22", "gene_name": "gpr22b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MHVPPAAEEESTMSNVTVLDITESVSPVMTAAGGPYPYPLSFQVSLTGFLMLEIVLGLSSNLTVLALYCMKSNLVNSVSNIVTMNLHVLDVLVCVCCIPLTIVVLMLSLQGDTVLVCCFHEACVSFASVATAANVLAITLDRYDISVKPANRVLTMGRAVALLGCIWVLSFVSFLVPFIEVGFLGPEPTLANQTAVVHVNEYYTELGLYYHLVAQIPIFCLTAVIMLMTYAKILQALNIRIGTRFHATQKKKKKLRRKKNFSLMSTSEQQLPEITDASQSSGGTRGNAPLGMRTSVSVIIALRRAVKRHRERRERQKRVFRMSLLIISTFLLCWTPITVLNTVILSAGPSDLTVKLRLGFLVMAYGTTVFHPLLYAFTRQKFQKVLKSKMKKRVVSISEADPLPNNAVIRNSWIDPKRNKKVTFDDHEARQKCLSSEDAD", "length": 440 }, "evidence": [ { "id": "F1SAF1", "url": "https://omabrowser.org/oma/group/F1SAF1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D4A3U0-1", "protein_name": "G protein-coupled receptor 22", "gene_name": "Gpr22", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCFSPVLEINMQSESNVTVRDDIEDIDTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLISSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLERNTALICCFHEACVSFASVSTAINVFAITLDRYDISVKPANRILTMGRAVMLMTSIWIFSFFSFLIPFIEVNFFSLQSGNAWENKTLLCVSTSEYYTELGMYYHLLVQIPIFFFTVIVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTHETTDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFKMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLVMAYGTTIFHPLLYAFTRQKFQKVLKSKMKKRVVSIVEADPMPNNAVIHNSWIDPKRNKKVTYEDSEIREKCLVPQVVTD", "length": 432 }, "evidence": [ { "id": "F1SAF1", "url": "https://omabrowser.org/oma/group/F1SAF1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3N3E9-1", "protein_name": "G-protein coupled receptor 22", "gene_name": "GPR22", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTAINVFAITLDRYDISVKPANRILTMGRAAMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTWENKTLLCVSTNEYYTELGMYYHLLVQIPIFFFTVIVMLITYSKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHETTDMSQGSGGRNVVFGVRTSVSVIIALRRAMKRHRERRERQKRVFKMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLVMGYGTTIFHPLLYAFTRQKFQKVLKSKMKKRVVSIVEADPMPNNAVIHNSWIDPKRNKKLTFEDSEIREKCLVPQVVTD", "length": 433 }, "evidence": [ { "id": "F1SAF1", "url": "https://omabrowser.org/oma/group/F1SAF1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8BZL4-1", "protein_name": "G protein-coupled receptor 22", "gene_name": "Gpr22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCFSPVLEINMQSESNVTVRDDIDDIDTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTAINVFAITLDRYDISVKPANRILTMGRAVMLMTSIWIFSFFSFLIPFIEVNFFSLQSGNTWANKTLLCVSTSEYYTELGMYYHLLVQIPIFFFTVIVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLATHETTDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFKMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLVMAYGTTIFHPLLYAFTRQKFQKVLKSKMKKRVVSIVEADPMPNNAVIHNSWIDPKRNKKVTYEDSEIREKCLVPQVVTD", "length": 432 }, "evidence": [ { "id": "F1SAF1", "url": "https://omabrowser.org/oma/group/F1SAF1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q99680-1", "protein_name": "G protein-coupled receptor 22", "gene_name": "GPR22", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEACVSFASVSTAINVFAITLDRYDISVKPANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSLQSGNTWENKTLLCVSTNEYYTELGMYYHLLVQIPIFFFTVVVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHEATDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFRMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLVMAYGTTIFHPLLYAFTRQKFQKVLKSKMKKRVVSIVEADPLPNNAVIHNSWIDPKRNKKITFEDSEIREKCLVPQVVTD", "length": 433 }, "evidence": [ { "id": "F1SAF1", "url": "https://omabrowser.org/oma/group/F1SAF1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "G protein-coupled receptor activity", "id": "GO:0004930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004930", "evidence": [ { "database": "UniProtKB", "id": "F1SAF1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SAF1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "G protein-coupled receptor signaling pathway", "id": "GO:0007186", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007186", "evidence": [ { "database": "UniProtKB", "id": "F1SAF1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1" } ], "pmid": "" }, { "name": "cellular response to hormone stimulus", "id": "GO:0032870", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032870", "evidence": [ { "database": "UniProtKB", "id": "F1SAF1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1" } ], "pmid": "" }, { "name": "cell projection organization", "id": "GO:0030030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030030", "evidence": [ { "database": "UniProtKB", "id": "F1SAF1", "url": "https://www.uniprot.org/uniprotkb/F1SAF1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 16, "end_pos": 18, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 333, "end_pos": 335, "annotation": "n_glycosylation_sequon" }, { "start_pos": 59, "end_pos": 61, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SAF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAF1" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 58, "end_pos": 367, "start_aa": "Ser", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 16, "end_pos": 18 }, { "start_pos": 192, "end_pos": 194 }, { "start_pos": 333, "end_pos": 335 }, { "start_pos": 59, "end_pos": 61 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MCOLN2", "url": "https://www.uniprot.org/uniprotkb/F1SAG5", "locus": { "chromosome": "6", "start_pos": 128836951, "end_pos": 128776430, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003755", "url": "https://www.ensembl.org/id/ENSSSCG00000003755" } ] } } ], "crossref": [ { "id": "ENSSSCG00000003755", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003755", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100522324", "url": "https://www.ncbi.nlm.nih.gov/gene/100522324", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013122", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013122", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039031", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039031", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049134", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049134", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522324", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522324", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QECKDWN", "url": "https://omabrowser.org/oma/group/QECKDWN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SAG5", "url": "https://www.orthodb.org/?gene=F1SAG5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12127", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12127", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12127:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12127:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08016", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08016", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21381", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21381", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-3295583", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3295583", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003127954", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127954", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "29671", "url": "https://www.rhea-db.org/rhea/29671", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287B0T6", "url": "https://www.uniprot.org/uniprotkb/A0A287B0T6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B0T6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B0T6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAG5", "url": "https://www.uniprot.org/uniprotkb/F1SAG5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAG5-1", "url": "https://www.uniprot.org/uniprotkb/F1SAG5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTRGREVLDLPVWSRTSGPSHGPHCRDAMAHLDSEVKEERLREDLKFYFMNPCEKFRARQQIPWKLGLQILKIVMVTSQLVRFGLSNQLVVAFKEENIVAFKHLFLRGYSGTDEDDYSCSVFTQEDTYESIFFAINQYHRLGNLSLGTLGYGEKEDSRIGLKVCKQHYKKGTMFPSNETLNIDSDVEIDCIHLGLQALSNNPQDWKNSSFFKLEFYRLLQIEISFQLKGIDLQTIYSRELPDCYVFQNMITFDNKAHSGKIKIYFNSDANIEECKDLNISGSIQRNIQYVLVFDAFVIVICLASLILCTRSIVLALRLRKRFLNFFLEKYKRHVCNTDQWEFVNGWYVLVIISDLMTIVGSILKMEIKVKNLTNYDLCSILLGTSTLLVWVGVIRYLGYFQAYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHNKFEKLNTVAECLFSLVNGDDMYATFAHIQQKSLLVWLFSRLYLYSFISLFIYMILSLFIALITDSYDTIKKYQKNGFPATDLQEFLKECSSKEKCQQESSAFLPRICCLRRNGSDDHLILVN", "length": 566, "header": "tr|F1SAG5-1|F1SAG5_PIG Isoform 1 of Mucolipin TRP cation channel 2 OS=Sus scrofa OX=9823 GN=MCOLN2 PE=4 SV=1 CANONICAL=F1SAG5-1" }, "isoforms": [ { "isoform_ac": "A0A287B0T6-1", "url": "https://www.uniprot.org/uniprotkb/F1SAG5/entry#A0A287B0T6-1", "sequence": { "sequence": "MTRGREVLDLPVWSRTSGPSHGPHCRDAMAHLDSEVKEERLREDLKFYFMNPCEKFRARQQIPWKLGLQILKIVMVTSQLVRFGLSNQLVVAFKEENIVAFKHLFLRGYSGTDEDDYSCSVFTQEDTYESIFFAINQYHRLGNLSLGTLGYGEKEDSRIGLKVCKQHYKKGTMFPSNETLNIDSDVEIDCIHLGLQALSNNPQDWKNSSFFKLEFYRLLQIEISFQLKGIDLQTIYSRELPDCYVFQNMITFDNKAHSGKIKIYFNSDANIEECKDLNISGSIQRNIQYVLVFDAFVIVICLASLILCTRSIVLALRLRKRFLNFFLEKYKRHVCNTDQWEFVNGWYVLVIISDLMTIVGSILKMEIKVKVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHNKFEKLNTVAECLFSLVNGDDMYATFAHIQQKSLLVWLFSRLYLYSFISLFIYMILSLFIALITDSYDTIKKYQKNGFPATDLQEFLKECSSKEKCQQESSAFLPRICCLRRNGSDDHLILVN", "length": 532, "header": "tr|A0A287B0T6-1|A0A287B0T6_PIG Computationally mapped isoform of Mucolipin TRP cation channel 2 OS=Sus scrofa OX=9823 GN=MCOLN2 PE=4 SV=2 CANONICAL=F1SAG5-1" }, "locus": { "chromosome": "6", "start_pos": 128835650, "end_pos": 128776510, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044350.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044350.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049722.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049722.2" } ] } }, { "isoform_ac": "F1SAG5-1", "url": "https://www.uniprot.org/uniprotkb/F1SAG5/entry#F1SAG5-1", "sequence": { "sequence": "MTRGREVLDLPVWSRTSGPSHGPHCRDAMAHLDSEVKEERLREDLKFYFMNPCEKFRARQQIPWKLGLQILKIVMVTSQLVRFGLSNQLVVAFKEENIVAFKHLFLRGYSGTDEDDYSCSVFTQEDTYESIFFAINQYHRLGNLSLGTLGYGEKEDSRIGLKVCKQHYKKGTMFPSNETLNIDSDVEIDCIHLGLQALSNNPQDWKNSSFFKLEFYRLLQIEISFQLKGIDLQTIYSRELPDCYVFQNMITFDNKAHSGKIKIYFNSDANIEECKDLNISGSIQRNIQYVLVFDAFVIVICLASLILCTRSIVLALRLRKRFLNFFLEKYKRHVCNTDQWEFVNGWYVLVIISDLMTIVGSILKMEIKVKNLTNYDLCSILLGTSTLLVWVGVIRYLGYFQAYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHNKFEKLNTVAECLFSLVNGDDMYATFAHIQQKSLLVWLFSRLYLYSFISLFIYMILSLFIALITDSYDTIKKYQKNGFPATDLQEFLKECSSKEKCQQESSAFLPRICCLRRNGSDDHLILVN", "length": 566, "header": "tr|F1SAG5-1|F1SAG5_PIG Isoform 1 of Mucolipin TRP cation channel 2 OS=Sus scrofa OX=9823 GN=MCOLN2 PE=4 SV=1 CANONICAL=F1SAG5-1" }, "locus": { "chromosome": "6", "start_pos": 128835650, "end_pos": 128776510, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004157.4", "url": "https://www.ensembl.org/id/ENSSSCT00000004157.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004063.2", "url": "https://www.ensembl.org/id/ENSSSCP00000004063.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SAG5", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522324", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522324", "resource": "KEGG Pathway" }, { "id": "R-SSC-3295583", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3295583", "resource": "Reactome", "description": "TRP channels" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZM58-1", "protein_name": "Mucolipin TRP cation channel 2", "gene_name": "MCOLN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLVTAVQSVMESNECKALHYTNMMAQSDLDLKETALKEDLKFYFMNPCDKYRARHQIPWKLALQILKIVMVTSQLVFFGLSNQLVVSFKEENTVAFKHLFLKGYSGVDEDDYSCSIYTQQDAYDSIFYVIDQYRQLKNISLGTLGYEHDGSGLKICKQQYRKGGMLPSNDKPNIDVSTETDCITLKPQELAGKNTEVKLNSSFFNLEFYRLIQVKISFKLKGVALQTIHARELPDCYAFQNTITFNNRAHSGKIKVYFNSDTDIQECKDWHILGSVLQKNSLYILVFDGFVILNCLASLILCSRSVVLALRLRQRFVNFFLEKYNRCVSYTDRMEFINGWYVLVIISDVMTIIGSILKMEIKAKNLTSYDVCSILLGTSTLFVWVGVIRYLGYFQTYNVLILTMQASLPKVLRFCCCAGMIYLGYTFCGWIVLGPYHEKFEDLNTVAECLFSLVNGDDMFATFAQIQQKSMLVWIFSRLYLYSFIILFIYMILSLFIALITDAYDTIKKYQQSGFLATDLHEFLKDCGNVSYRKEQTSMPSICCCRRRQSDDNLILIN", "length": 558 }, "evidence": [ { "id": "F1SAG5", "url": "https://omabrowser.org/oma/group/F1SAG5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8IZK6-1", "protein_name": "Mucolipin-2", "gene_name": "MCOLN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARQPYRFPQARIPERGSGVFRLTVRNAMAHRDSEMKEECLREDLKFYFMSPCEKYRARRQIPWKLGLQILKIVMVTTQLVRFGLSNQLVVAFKEDNTVAFKHLFLKGYSGTDEDDYSCSVYTQEDAYESIFFAINQYHQLKDITLGTLGYGENEDNRIGLKVCKQHYKKGTMFPSNETLNIDNDVELDCVQLDLQDLSKKPPDWKNSSFFRLEFYRLLQVEISFHLKGIDLQTIHSRELPDCYVFQNTIIFDNKAHSGKIKIYFDSDAKIEECKDLNIFGSTQKNAQYVLVFDAFVIVICLASLILCTRSIVLALRLRKRFLNFFLEKYKRPVCDTDQWEFINGWYVLVIISDLMTIIGSILKMEIKAKNLTNYDLCSIFLGTSTLLVWVGVIRYLGYFQAYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHDKFENLNTVAECLFSLVNGDDMFATFAQIQQKSILVWLFSRLYLYSFISLFIYMILSLFIALITDSYDTIKKFQQNGFPETDLQEFLKECSSKEEYQKESSAFLSCICCRRRKRSDDHLIPIS", "length": 566 }, "evidence": [ { "id": "F1SAG5", "url": "https://omabrowser.org/oma/group/F1SAG5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K595-1", "protein_name": "Mucolipin-2", "gene_name": "Mcoln2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPGDEETLDLPAWNRVPDLTWGPHHRSAMASLDSEVREECLREDLKFYFMSPCEKYRARRQIPWKLGLQILKIVMVTTQLVRFGLSNQLVVAFKEDNTVAFKHLFLKGFSGVDEDDYSCSIYTQENTYESIFFAIKQYRHLKNISLATLGYGESEDNRTGLKVCKQHYKTGAMFSSNETLNIDSDIETDCIHLDLQVLTTEPEDWAQTSFFRLDFYRLVQVDISFALKGIDLQAVHSREIPDCYLFQNTITFDNTAHSGKIKIYLNSEANIEECKNMNISGSTQRSTHYLLVFDVFVIMICLASLILCTRSIVLALRLRKRFLNFFLEKYKQRVCGADQWEFVNGWYVLVTISDLMTIIGSILKMEIKAKKLTNYDVCSILLGTSTLFVWVGVIRYLGYFQTYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHEKFENLNIVAECLFSLVNGDDMFATFAQIQQKSILVWLFSRLYLYSFISLFIYMVLSLFIALITDSYHTIKKYQQHGFPETDLQKFLKESGSKDGYQKQPSALLSCLCCLRRRRSNDHLILID", "length": 566 }, "evidence": [ { "id": "F1SAG5", "url": "https://omabrowser.org/oma/group/F1SAG5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "NAADP-sensitive calcium-release channel activity", "id": "GO:0072345", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072345", "evidence": [ { "database": "UniProtKB", "id": "F1SAG5", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" } ], "pmid": "" }, { "name": "monoatomic cation channel activity", "id": "GO:0005261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005261", "evidence": [ { "database": "UniProtKB", "id": "F1SAG5", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SAG5", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "F1SAG5", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SAG5", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 143, "end_pos": 145, "annotation": "n_glycosylation_sequon" }, { "start_pos": 177, "end_pos": 179, "annotation": "n_glycosylation_sequon" }, { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 278, "end_pos": 280, "annotation": "n_glycosylation_sequon" }, { "start_pos": 371, "end_pos": 373, "annotation": "n_glycosylation_sequon" }, { "start_pos": 556, "end_pos": 558, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "29671", "name": "", "equation": "Ca(2+)(in) = Ca(2+)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "29671", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/29671" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SAG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" }, { "id": "PF21381", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21381" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Mucolipin extracytosolic", "eco_id": "ECO_0000259", "start_pos": 90, "end_pos": 275, "start_aa": "Val", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SAG5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAG5" }, { "id": "PF08016", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08016" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Polycystin cation channel PKD1/PKD2", "eco_id": "ECO_0000259", "start_pos": 378, "end_pos": 513, "start_aa": "Cys", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 143, "end_pos": 145 }, { "start_pos": 177, "end_pos": 179 }, { "start_pos": 207, "end_pos": 209 }, { "start_pos": 278, "end_pos": 280 }, { "start_pos": 371, "end_pos": 373 }, { "start_pos": 556, "end_pos": 558 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { 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"database": "Ensembl Peptide", "id": "ENSSSCP00000052784.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052784.2" } ] } }, { "isoform_ac": "F1SAI2-1", "url": "https://www.uniprot.org/uniprotkb/F1SAI2/entry#F1SAI2-1", "sequence": { "sequence": "MADVAGPSRSGAAAFWSRDFSDEEQSVVYVPGISAEGNIRSRHKMVNPKADVKLKTSRVTAASVSMESLKGAGDSVDEQNFCRGGIKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQEAFERKIRQLEEQNDLIIKEREALQLQYKECQELLSLYQKYLSEQQEKLTMSLSELGAAKMQEQQVSNRRGTLQSSSVELDGSYLSAARPQTYYQTKQKPKSANQDPALEALVEFRNNSLKPAVLHYPKEIVDKVPSETRTCNHGSPGRKLADSVPTEKAPPEELKVKECQRPKAAPSSQCCGHRLSGNADHVHESQPTNMAPRHSKTYPESCSYCGLSCVSPMHGQGALQPSETEIKKQLSEDRRQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNCLLKSKCDGWMLGTSPSIKNYQDSTNNGENRREKTVGFQSHMEDNAPWTCQKKDTCWPQRGTMAGVRKDASTSPMKTGSQKELVITTTSSLQHDTPRYETSLLDLVQSLSPKTAPKLPLRSSGEGGSWNHSTCRLSPPKSTWNKPRAGRTPEDLEENQILEDIFFIL", "length": 583, "header": "tr|F1SAI2-1|F1SAI2_PIG Isoform 1 of KIAA1328 OS=Sus scrofa OX=9823 GN=KIAA1328 PE=4 SV=3 CANONICAL=F1SAI2-1" }, "locus": { "chromosome": 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] }, { "id": "cd05880", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05880", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000920", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000920", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029863", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029863", "database": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAK9" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 23, "end_pos": 141, "start_aa": "Pro", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 118, "end_pos": 120 }, { "start_pos": 39, "end_pos": 41 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SAN2-1", "uniprot_ac": "F1SAN2", "uniprot_id": "F1SAN2_PIG", "mass": { "chemical_mass": 57067.0, "monoisotopic_mass": 57067.0 }, "refseq": { "ac": "XP_003123503", "name": "coiled-coil domain-containing protein 105", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123503" }, "gene_names": [ { "name": "CCDC105", "type": "recommended", "evidence": [ { "id": "F1SAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAN2" } ] }, { "name": "CCDC105", "type": "synonym", "evidence": [ { "id": "XP_003123503", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123503" } ] }, { "name": "TEKTL1", "type": "synonym", "evidence": [ { "id": "F1SAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAN2" } ] } ], "protein_names": [ { "name": "Coiled-coil domain containing 105", "type": "synonym", "evidence": [ { "id": "F1SAN2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAN2/entry#names_and_taxonomy" } ] }, { "name": "coiled-coil domain-containing protein 105", "type": "synonym", "evidence": [ { "id": "XP_003123503", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123503" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SAN2", "url": "https://www.uniprot.org/uniprotkb/F1SAN2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC105", "url": "https://www.uniprot.org/uniprotkb/F1SAN2", "locus": {} } ], "crossref": [ { "id": "F1SAN2", "url": "https://alphafold.ebi.ac.uk/entry/F1SAN2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013834", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013834", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524071", "url": "https://www.ncbi.nlm.nih.gov/gene/100524071", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR038949", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038949", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048256", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048256", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524071", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524071", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YTPECAT", "url": "https://omabrowser.org/oma/group/YTPECAT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SAN2", "url": "https://www.orthodb.org/?gene=F1SAN2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35081", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35081", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35081:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35081:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03148", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03148", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003123503", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123503", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SAN2", "url": "https://www.uniprot.org/uniprotkb/F1SAN2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAN2-1", "url": "https://www.uniprot.org/uniprotkb/F1SAN2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPVEHSPDVRVGPPAWREAAKAIIQKAHQLNDRCGQEAVTMWQPKDSVQDPHMARHLCRAAYILPWRFRVEMLKGGGTMEQPPPGEGVTLWKNKMKPPAWHARLPLPMHRDARALQTAEVVHAHARGARLTAARLGRAQQQINGQMRLLQRQREATDHRLSEVRKGLLINQQSVKLRGYRPKSEKIPDKADTMLTWEKEELKSMKRKMEKDMEKSEALLKTLASCRETLIFCCEERLQAVELMNQPLDKVLEQACRHSWVNLSRVPTPRTQGLKTPPPDPVGTYTPECATALYEAKQLLMESKDTLLDMAKNEEDIREQQQQISDRVCASIAQKMRETLELKDKMNMTLGLMRRTIHRCTKFNQEMYITHGLTKGPLSKTHLETREKLDRPLVRVYQRHVGTQLPEATRLAQGTDKLQRHISLAEKNLKELLAARKNLTWSLNCKKIGHEVDDNVVRLRLRQRHPQVCYEQAQRLVSDWDPRTPPRWESSAAAK", "length": 495, "header": "tr|F1SAN2-1|F1SAN2_PIG Isoform 1 of Coiled-coil domain containing 105 OS=Sus scrofa OX=9823 GN=CCDC105 PE=4 SV=2 CANONICAL=F1SAN2-1" }, "isoforms": [ { "isoform_ac": "F1SAN2-1", "url": "https://www.uniprot.org/uniprotkb/F1SAN2/entry#F1SAN2-1", "sequence": { "sequence": "MPPVEHSPDVRVGPPAWREAAKAIIQKAHQLNDRCGQEAVTMWQPKDSVQDPHMARHLCRAAYILPWRFRVEMLKGGGTMEQPPPGEGVTLWKNKMKPPAWHARLPLPMHRDARALQTAEVVHAHARGARLTAARLGRAQQQINGQMRLLQRQREATDHRLSEVRKGLLINQQSVKLRGYRPKSEKIPDKADTMLTWEKEELKSMKRKMEKDMEKSEALLKTLASCRETLIFCCEERLQAVELMNQPLDKVLEQACRHSWVNLSRVPTPRTQGLKTPPPDPVGTYTPECATALYEAKQLLMESKDTLLDMAKNEEDIREQQQQISDRVCASIAQKMRETLELKDKMNMTLGLMRRTIHRCTKFNQEMYITHGLTKGPLSKTHLETREKLDRPLVRVYQRHVGTQLPEATRLAQGTDKLQRHISLAEKNLKELLAARKNLTWSLNCKKIGHEVDDNVVRLRLRQRHPQVCYEQAQRLVSDWDPRTPPRWESSAAAK", "length": 495, "header": "tr|F1SAN2-1|F1SAN2_PIG Isoform 1 of Coiled-coil domain containing 105 OS=Sus scrofa OX=9823 GN=CCDC105 PE=4 SV=2 CANONICAL=F1SAN2-1" }, "locus": { "chromosome": "2", "start_pos": 62582556, "end_pos": 62571483, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015112.4", "url": "https://www.ensembl.org/id/ENSSSCT00000015112.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014707.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014707.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SAN2", "url": "https://www.uniprot.org/uniprotkb/F1SAN2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524071", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524071", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E7F4M4-1", "protein_name": "Tektin-like protein 1", "gene_name": "tektl1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKRRVQSAPQAVVVGPKGWRDATVRSIQRAENLLRQTHVDQLDSSTRYRSHSVAISAYRLPQLTAYSGDESMEKEHSETDWEKKEEFWPKSTGSLLTSGLIGGPFPPPVLREQSAVVSTGLAADYMRSVREVEGHLRKQTGRVTQEATKVEHQRERLEKLLRSLRKALLVNQQSANGRTFRPATTETGRDGADDLLQTERRGLNMLKQELESMLRKTLAQQQALADSSKQLLDCAFLRSSVTELLPQHGSLLAGVKTYPSPLSLKPDPAGPFTPECKQALDSSSAVLQESQQLRENITQVMSDVIRKQTDMHRSASEALLRKITETINLEQHLTLSSAATRQAIYRKQRQMQCAGYSLGRALGPVCRADLFCRERLNRPMTQLYGRHSSVGLPESDLLAQGDTMLRKHLESSGKEIAALQDAHQQLEDDMYGKRAAAGVDSAVVRLRRRLVRPQSVRPATS", "length": 461 }, "evidence": [ { "id": "F1SAN2", "url": "https://omabrowser.org/oma/group/F1SAN2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDN4-1", "protein_name": "Tektin-like protein 1", "gene_name": "TEKTL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPVLIPPVEHSQDTRVGHPAWREATRALAEEAHQLTDRCGQEAVTMWQPNESVRDPHVAHHLCRAAYILPWRFRVEMLKGGSTMEKPPPGEGVTLWKSKMKPPAWHARLPLPMHRDARALQTAEVVQAHARGARLTAARLGRAQHQINGQLRLLQRQREATDRRLSEVRKALLINQQSVKLRGYRPKSETISDKADSMLTWEKEELKSMKRKMEADMEKSEALLKTLASCRDALVFCCKERLQAVELMNQPLDKVLEQAGRHSWVNISRVPTPRTQGLKTPPPDPVGTYTPECAKALYEAKRLLMESKDTLLDMAKNEEDIREQQQQISDRVCASLAQKMRETLELKDRLNMTLGLMRGTIHRCTKFNQEMYITRGLIKGPLSKSHLETREKLDRPLVRMYQRHVGTQLPEAARLAQGTDKLQRHISHVEKNLDELLSMRKKLTWSFNCKKIGHNVDYSVVRLRLRQRHPQVCYEQAQRLVNDWDPRTPPRVKSNTAITK", "length": 500 }, "evidence": [ { "id": "F1SAN2", "url": "https://omabrowser.org/oma/group/F1SAN2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q4V7B5-1", "protein_name": "Tektin-like protein 1", "gene_name": "Tektl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVLLPSTDRDQDSRVGAPEWHQAAKATSRKAHLLTDRCGKEAVTMWQPKDSVLDPNVAHHLGRAAYMEPWRFRVEMLKGGGTVEKPPPGEGVTLWKGKMKPPAWYARLPLPMHRDARAQQTAEVVHAHARGARLTAARLGRAQHQINGQLRLLLRQREATDRRLSEVRKGLLINEQSVKLRGYRPKCEKIPDKADSMLVWEREELKSMKRKMEKDMERSEALLKALASCRDTLDFYCQERLQAVGLMNQPLDKVLEQAGRHSWVDITRPPTPRTQGLKTPPPDPVGAYTPACAKALFEAKRLLMESKDILAELAKNEVDIQNQQQEISDRVCNSLAQKMRETLELKERMTMTLGLMRGTIHRCMKFNQEMYVTRGLIKGPLLKRDLEAREKLNRPLVRMYQRHVGTQLPEATRLAQGTDLLTRHNLQMEKNLKELRTTHDNLAWSLNCKKIGHDVDYDVVRLRLRQLHPHVCYEQAKRLINDWDPRTPPPCSRTNTSSK", "length": 500 }, "evidence": [ { "id": "F1SAN2", "url": "https://omabrowser.org/oma/group/F1SAN2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8IYK2-1", "protein_name": "Tektin-like protein 1", "gene_name": "TEKTL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRVLVPPAERSQDTRVGAPAWREAAQAMARTAHILTDRCGQEAVTMWQPKDSVLDPNVAHHLGRAAYIQPWRFRVEMIKGGGTLEKPPPGEGVTLWKGKMKPPAWYARLPLPLHRKARALQTTEVVHAHARGARLTAARLGRAQHQINGRVRQLLRQREVTDHRLSEVRKGLLINQQSVKLRGYRPKSEKVPDKADSMLTWEKEELKSMKRKMERDMEKSEVLLKTLASCRDTLNFCFKERLQAVDLMNQPLDKVLEQARRHSWVNLSRAPTPRTQGQKTPPPDPVGTYNPACALALNEAKRLLVESKDTLVEMAKNEVDVREQQLQISDRVCASLAQKASETLELKERLNMTLGLMRGTILRCTKYNQELYTTHGLIKGPLSKVHLETAEKLDRPLVRMYQRHVGTQLPEAARLAQGTDKLQCHITYLEKNLDELLATHKNLSWGLNCKNIGHEVDGNVVRLRLRQRQPHVCYEQAQRLVKDWDPRTPPPRSKSSADP", "length": 499 }, "evidence": [ { "id": "F1SAN2", "url": "https://omabrowser.org/oma/group/F1SAN2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D4K7-1", "protein_name": "Tektin-like protein 1", "gene_name": "Tektl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPVLLPSTDPGQDSRVGAPEWRQAAKATSRKAHLLTDRCGQEAVTMWQPKDSVLDPNVAHHLGRAAYMEPWRFRVEMLKGGGTLEKPPPGEGVTLWKGKMKPPAWYARLPLPMHRDARAQQTAEVVHAHARGARLTAARLGRAQHQINGQLRLLLRQREATDRRLSEVRKGLLINQQSVKLRGYRPKCEKIPDKADSLLVWEKKELKSMKRKMEKDMEISEDLLKALASCRDTLDFYCQERLQAVELMNQPLDKVLEQAGRHSWVDITRPPTPRTQGLKTPPPDPIGTYTPACAKALFEAKRLLMESKDILTEMAKNEVDIQNQQQEISNRVCSSLAQKMRETLELKERMTMTLGLMRGTIHRCMKFNQEMYVTRGIIKGPLLKRNLEAREKLNRPLVRMYQRHVGTQLPEATRLAQGTDLLTRHNLHMEKNLKELRTTHDNLAWGLNCKKIGHDVDYDVVRLRLRQRHPHVCYEQAQRLVNDWDPPTPARSQTNTASK", "length": 499 }, "evidence": [ { "id": "F1SAN2", "url": "https://omabrowser.org/oma/group/F1SAN2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "flagellated sperm motility", "id": "GO:0030317", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030317", "evidence": [ { "database": "UniProtKB", "id": "F1SAN2", "url": "https://www.uniprot.org/uniprotkb/F1SAN2" } ], 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"Protein Classification" ] }, { "id": "IPR036249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154744", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154744", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TKLMPQC", "url": "https://omabrowser.org/oma/group/TKLMPQC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SAR5", "url": "https://www.orthodb.org/?gene=F1SAR5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10293", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10293", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10293:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10293:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00462", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00462", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1362409", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1362409", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001929028", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929028", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SAR5", "url": "https://www.uniprot.org/uniprotkb/F1SAR5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAR5-1", "url": "https://www.uniprot.org/uniprotkb/F1SAR5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSASLGRAAAALLRWGRGVGGGLWVPGVRAASSGGSGSAEHLDTLVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPQLRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKKLGIRSALLDEKTDQDSK", "length": 154, "header": "tr|F1SAR5-1|F1SAR5_PIG Isoform 1 of Glutaredoxin-related protein 5, mitochondrial OS=Sus scrofa OX=9823 GN=GLRX5 PE=1 SV=1 CANONICAL=F1SAR5-1" }, "isoforms": [ { "isoform_ac": "F1SAR5-1", "url": "https://www.uniprot.org/uniprotkb/F1SAR5/entry#F1SAR5-1", "sequence": { "sequence": "MSASLGRAAAALLRWGRGVGGGLWVPGVRAASSGGSGSAEHLDTLVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPQLRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKKLGIRSALLDEKTDQDSK", "length": 154, "header": "tr|F1SAR5-1|F1SAR5_PIG Isoform 1 of Glutaredoxin-related protein 5, mitochondrial OS=Sus scrofa OX=9823 GN=GLRX5 PE=1 SV=1 CANONICAL=F1SAR5-1" }, "locus": { "chromosome": "7", "start_pos": 116797033, "end_pos": 116787480, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002774.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002774.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002703.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002703.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome 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"MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDFSSEDKSPEYFYMGLYVLVGAGVLMMAVGFFGCCGATRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVAIRHVQTMYEEAYNDYLRDREKGNGTLITFHSAFQCCGKESSEQVQPTCPKELLGHKNCIDEIETIISVKLQLVGIVGIGIAGLTIFGMIFSMVLCCAIRNSQDVI", "length": 221, "header": "tr|F1SAW5-1|F1SAW5_PIG Isoform 1 of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN2 PE=3 SV=3 CANONICAL=F1SAW5-1" }, "isoforms": [ { "isoform_ac": "A0A287BJ34-1", "url": "https://www.uniprot.org/uniprotkb/F1SAW5/entry#A0A287BJ34-1", "sequence": { "sequence": "MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDFSSEDKSPEYFYMGLYVLVGAGVLMMAVGFFGCCGATRESQCVLGSAIRHVQTMYEEAYNDYLRDREKGNGTLITFHSAFQCCGKESSEQVQPTCPKELLGHKNCIDEIETIISVKLQLVGIVGIGIAGLTIFGMIFSMVLCCAIRNSQDVI", "length": 196, "header": "tr|A0A287BJ34-1|A0A287BJ34_PIG Computationally mapped isoform of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN2 PE=3 SV=3 CANONICAL=F1SAW5-1" }, "locus": { "chromosome": "4", "start_pos": 105540874, "end_pos": 105503180, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056862.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056862.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056384.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056384.3" } ] } }, { "isoform_ac": "A0A287BMS3-1", "url": "https://www.uniprot.org/uniprotkb/F1SAW5/entry#A0A287BMS3-1", "sequence": { "sequence": "MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDFSSEDKSPEYFYMGLYVLVGAGVLMMAVGFFGCCGATRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVAIRHVQTMYEEAYNDYLRDREKGNGTLITFHSAFQCCGKESSEQVQPTCPKELLGHKNCIDEIETIISVKLQLVGIVGIGIAGLTVRKSQNVPSLPSVKPESLHPISLQM", "length": 225, "header": "tr|A0A287BMS3-1|A0A287BMS3_PIG Computationally mapped isoform of Tetraspanin-2 OS=Sus scrofa OX=9823 GN=TSPAN2 PE=3 SV=3 CANONICAL=F1SAW5-1" }, "locus": { "chromosome": "4", "start_pos": 105538376, "end_pos": 105503180, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056235.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056235.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057373.3", "url": "https://www.ensembl.org/id/ENSSSCP00000057373.3" } ] } }, { "isoform_ac": "F1SAW5-1", "url": "https://www.uniprot.org/uniprotkb/F1SAW5/entry#F1SAW5-1", "sequence": { "sequence": "MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDFSSEDKSPEYFYMGLYVLVGAGVLMMAVGFFGCCGATRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVAIRHVQTMYEEAYNDYLRDREKGNGTLITFHSAFQCCGKESSEQVQPTCPKELLGHKNCIDEIETIISVKLQLVGIVGIGIAGLTIFGMIFSMVLCCAIRNSQDVI", "length": 221, "header": "tr|F1SAW5-1|F1SAW5_PIG Isoform 1 of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN2 PE=3 SV=3 CANONICAL=F1SAW5-1" }, "locus": { "chromosome": "4", "start_pos": 105540874, "end_pos": 105503180, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007393.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007393.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007198.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007198.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SAW5", "url": "https://www.uniprot.org/uniprotkb/F1SAW5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156161", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156161", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C2R3-1", "protein_name": "Tetraspanin", "gene_name": "TSPAN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGTAYARMRCIKILLFIFNLSFWLAGLAVIAFGLWLRFGGAMAEFASDKRSPEYFFIGLYVLVGAGALMTTVGFFGCCGAARESQFLLGAFFACLLVIFAAEITAGVFAFIGKKVAIQEAQRIYEDIYDEYVKNPGKVNRTIYHYHLALQCCGKDNLEQHVGLPCPEKMQVPKNCLVEIHNVIDANLHLVGIVGIAIAGTTIFGMIFSMVLCCAIRNTREMI", "length": 222 }, "evidence": [ { "id": "F1SAW5", "url": "https://omabrowser.org/oma/group/F1SAW5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O60636-1", "protein_name": "Tetraspanin-2", "gene_name": "TSPAN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGAIKELSSEDKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKGVAIRHVQTMYEEAYNDYLKDRGKGNGTLITFHSTFQCCGKESSEQVQPTCPKELLGHKNCIDEIETIISVKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSRDVI", "length": 221 }, "evidence": [ { "id": "F1SAW5", "url": "https://omabrowser.org/oma/group/F1SAW5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q922J6-1", "protein_name": "Tetraspanin-2", "gene_name": "Tspan2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGLWFRFGGTMKDLSSEDKSPEYFYVGLYVLVGAGALMMTVGFFGCCGAMRESQCVLGSFFTCLLVIFAAEVTTGVFAFIGKDVAIRHVQSMYEEAYSDYLKDRARGNGTLITFHSAFQCCGKESSEQVQPTCPKELPGHKNCIDKIETVISAKLQLIGIVGIGIAGLTIFGMIFSMVLCCAIRNSRDVI", "length": 221 }, "evidence": [ { "id": "F1SAW5", "url": "https://omabrowser.org/oma/group/F1SAW5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SAW5", "url": "https://www.uniprot.org/uniprotkb/F1SAW5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SAW5", "url": "https://www.uniprot.org/uniprotkb/F1SAW5" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SAW5", "url": "https://www.uniprot.org/uniprotkb/F1SAW5" } ], "pmid": "" }, { "name": "myelin sheath", "id": "GO:0043209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043209", "evidence": [ { "database": "UniProtKB", "id": "F1SAW5", "url": "https://www.uniprot.org/uniprotkb/F1SAW5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 139, "end_pos": 141, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 139, "end_pos": 141 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SAX0-1", "uniprot_ac": "F1SAX0", "uniprot_id": "F1SAX0_PIG", "mass": { "chemical_mass": 60488.0, "monoisotopic_mass": 60488.0 }, "refseq": { "ac": "XP_001927939", "name": "solute carrier family 22 member 15 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927939" }, "gene_names": [ { "name": "SLC22A15", "type": "recommended", "evidence": [ { "id": "F1SAX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAX0" } ] }, { "name": "SLC22A15", "type": "synonym", "evidence": [ { "id": "XP_001927939", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927939" } ] } ], "protein_names": [ { "name": "Solute carrier family 22 member 15", "type": "synonym", "evidence": [ { "id": "F1SAX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAX0/entry#names_and_taxonomy" } ] }, { "name": "solute carrier family 22 member 15 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001927939", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927939" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SAX0", "url": "https://www.uniprot.org/uniprotkb/F1SAX0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC22A15", "url": "https://www.uniprot.org/uniprotkb/F1SAX0", "locus": { "chromosome": "4", "start_pos": 104664015, "end_pos": 104755672, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006743", "url": "https://www.ensembl.org/id/ENSSSCG00000006743" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006743", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006743", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17377", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17377", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "110255201", "url": "https://www.ncbi.nlm.nih.gov/gene/110255201", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005828", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005828", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:110255201", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:110255201", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SAX0", "url": "https://www.orthodb.org/?gene=F1SAX0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24064", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24064", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00083", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00083", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-549127", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-549127", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001927939", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927939", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SAX0", "url": "https://www.uniprot.org/uniprotkb/F1SAX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAX0-1", "url": "https://www.uniprot.org/uniprotkb/F1SAX0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEVEEAFQAVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHSNQSVREEQALGAWLLTANGSEIHKHVHFSGSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAITRFLVGVMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAVLVNLQGTVVFLLSLFIPESPRWLYSQGRLREAEAALYLIARRNRQLRCTFSLTHPANRSCKETGSFLDLFRYRVLLGHTLTLMFIWFVCSLVYYGLTLSAGDLGGNIYANLALSGLIEIPSYPICIYLINQKWFGRKRTLAAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNVVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQVYSYRRLGEEALSLQTLDPPQSAGKDSPLGSESEEEEEFYDADEETQMIK", "length": 547, "header": "tr|F1SAX0-1|F1SAX0_PIG Isoform 1 of Solute carrier family 22 member 15 OS=Sus scrofa OX=9823 GN=SLC22A15 PE=4 SV=2 CANONICAL=F1SAX0-1" }, "isoforms": [ { "isoform_ac": "F1SAX0-1", "url": "https://www.uniprot.org/uniprotkb/F1SAX0/entry#F1SAX0-1", "sequence": { "sequence": 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{ "annotation": "DsDNA-dependent ATPase which acts as a transcription termination factor by coupling ATP hydrolysis with removal of RNA polymerase II from the DNA template. May contribute to mitotic transcription repression. May also be involved in pre-mRNA splicing.", "evidence": [ { "database": "UniProtKB", "id": "I3L7V5", "url": "https://www.uniprot.org/uniprotkb/I3L7V5#function" }, { "database": "UniProtKB", "id": "ARBA00055750", "url": "https://www.uniprot.org/uniprotkb/ARBA00055750#function" }, { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TTF2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2", "locus": { "chromosome": "4", "start_pos": 103632381, "end_pos": 103695036, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006733", "url": "https://www.ensembl.org/id/ENSSSCG00000006733" } ] } } ], "crossref": [ { "id": "F1SAY2", "url": "https://alphafold.ebi.ac.uk/entry/F1SAY2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006733", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006733", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18072", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18072", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18793", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18793", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000330", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000330", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001650", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001650", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010666", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010666", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014001", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014001", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038718", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038718", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049730", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049730", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050628", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050628", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IVSQWTN", "url": "https://omabrowser.org/oma/group/IVSQWTN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45626", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45626", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45626:SF50", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45626:SF50", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00176", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00176", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00271", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00271", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06839", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06839", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "13065", "url": "https://www.rhea-db.org/rhea/13065", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SAY2-1", "url": "https://www.uniprot.org/uniprotkb/F1SAY2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7V5", "url": "https://www.uniprot.org/uniprotkb/I3L7V5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7V5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7V5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKISVKPFQVINESHHDPSLSRPYLSVHKHEIKSTITIQIVLAFAPGLLRVLVIYKMFFNHFRGFPRILGIPMSSQTSPLPHGFLLLCSDLWAPTAVVMLEPMRCQNWMVVSKGKCPTLILSLLCTLFGSRTNPKSLVSPISKDSLVKTTPLSLAQYLLSPESRHSQSETSLGDRLYVPHSPFSAPRNLGDISIPGLLLLQDLQSKASLSPEASPASKTLSSFGHAPSTKDQVHPPPRLSSISARGKPEDGCDWLERRSRMEVVRCPQHGTLCFLKTGVRDGPNKGKSFYVCPADTCNFLRATDIPVSHCLLHEGMVVELQGLFLPQGKKEYRLLFRCTRSKAEGKRWCGNIPWQDPNSKGYSVTSKSQHASEPPHYPFSQQRNPFKVLDKNQEPSLWKQFIKGEDEEKTAHKKQKEKGHPLLDQDNVQKPESKCWMEKDLSSGLVVKEKPSAVQEKQRGEKTEFQCDTKELEGMHQRKVFEMKSRQVHKDELREPPVSQETANGDSYIRKESEPPRKEETKPLPRTVPSQHPINQPQKGGHLSQEHPQSWEVRETKTKDDPSCSQTLQKRLLQGHSHAQSETRDVSALKEPAAQPAPPATRHPRGEREDVDTSSGDSEEDDVVFVSSEPGSPLLFDLTPDSQKKENLKFPGQSEQRKISPASGVCKKGEPLDPAAQRVHLTAQLKQKKSTLASVNLQALPDKGQKLFKQIQELEEALGALALYPEQDVNEKRNTQVPQQRNATKTSSDPPHLVPPRPLQGQDLQPLASLGLKAARQEIAGGSGQCRGGPTSQDRLHSVWKVTSEAIDELHRSLESRPDETAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPPGGILADDMGLGKTLTMIALILTQKNQEKNKEKDKTTSSTWLSKTDSSEFTSHRTLIICPASLIHHWKNEVQKRVCNNELRVYLYHGPNRDQNAKVLSMYDIVITTYSLLAKEIPTKEQEGAVPGAELSVQGTASPLLRIVWARIILDEAHTVKNPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFSLWKSQVDNGSKKGGERLNILTKSLLLRRTKDQLDSTGKPLVELPQRQFQLHRLKLSEDEETVYNVLFARSRSDLQSYLKRYETGDRSSARSPDNPFNKVAQEFGSDGPRRPVAGDLQGSSTVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALTLSELHSSESSASVSLNGTCFKVELFDSMRQSTKISSLLAELEAIRRNSGSQKSVIVSQWTSMLEVVALHLKRHRVTYATIDGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQASDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQILSGSGEFVTKLTLADLKILFGI", "length": 1426, "header": "tr|F1SAY2-1|F1SAY2_PIG Isoform 1 of Transcription termination factor 2 OS=Sus scrofa OX=9823 GN=TTF2 PE=3 SV=4 CANONICAL=F1SAY2-1" }, "isoforms": [ { "isoform_ac": "F1SAY2-1", "url": "https://www.uniprot.org/uniprotkb/F1SAY2/entry#F1SAY2-1", "sequence": { "sequence": "MKISVKPFQVINESHHDPSLSRPYLSVHKHEIKSTITIQIVLAFAPGLLRVLVIYKMFFNHFRGFPRILGIPMSSQTSPLPHGFLLLCSDLWAPTAVVMLEPMRCQNWMVVSKGKCPTLILSLLCTLFGSRTNPKSLVSPISKDSLVKTTPLSLAQYLLSPESRHSQSETSLGDRLYVPHSPFSAPRNLGDISIPGLLLLQDLQSKASLSPEASPASKTLSSFGHAPSTKDQVHPPPRLSSISARGKPEDGCDWLERRSRMEVVRCPQHGTLCFLKTGVRDGPNKGKSFYVCPADTCNFLRATDIPVSHCLLHEGMVVELQGLFLPQGKKEYRLLFRCTRSKAEGKRWCGNIPWQDPNSKGYSVTSKSQHASEPPHYPFSQQRNPFKVLDKNQEPSLWKQFIKGEDEEKTAHKKQKEKGHPLLDQDNVQKPESKCWMEKDLSSGLVVKEKPSAVQEKQRGEKTEFQCDTKELEGMHQRKVFEMKSRQVHKDELREPPVSQETANGDSYIRKESEPPRKEETKPLPRTVPSQHPINQPQKGGHLSQEHPQSWEVRETKTKDDPSCSQTLQKRLLQGHSHAQSETRDVSALKEPAAQPAPPATRHPRGEREDVDTSSGDSEEDDVVFVSSEPGSPLLFDLTPDSQKKENLKFPGQSEQRKISPASGVCKKGEPLDPAAQRVHLTAQLKQKKSTLASVNLQALPDKGQKLFKQIQELEEALGALALYPEQDVNEKRNTQVPQQRNATKTSSDPPHLVPPRPLQGQDLQPLASLGLKAARQEIAGGSGQCRGGPTSQDRLHSVWKVTSEAIDELHRSLESRPDETAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPPGGILADDMGLGKTLTMIALILTQKNQEKNKEKDKTTSSTWLSKTDSSEFTSHRTLIICPASLIHHWKNEVQKRVCNNELRVYLYHGPNRDQNAKVLSMYDIVITTYSLLAKEIPTKEQEGAVPGAELSVQGTASPLLRIVWARIILDEAHTVKNPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFSLWKSQVDNGSKKGGERLNILTKSLLLRRTKDQLDSTGKPLVELPQRQFQLHRLKLSEDEETVYNVLFARSRSDLQSYLKRYETGDRSSARSPDNPFNKVAQEFGSDGPRRPVAGDLQGSSTVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALTLSELHSSESSASVSLNGTCFKVELFDSMRQSTKISSLLAELEAIRRNSGSQKSVIVSQWTSMLEVVALHLKRHRVTYATIDGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQASDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQILSGSGEFVTKLTLADLKILFGI", "length": 1426, "header": "tr|F1SAY2-1|F1SAY2_PIG Isoform 1 of Transcription termination factor 2 OS=Sus scrofa OX=9823 GN=TTF2 PE=3 SV=4 CANONICAL=F1SAY2-1" }, "locus": { "chromosome": "4", "start_pos": 103693336, "end_pos": 103633116, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007376.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007376.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007181.5", "url": "https://www.ensembl.org/id/ENSSSCP00000007181.5" } ] } }, { "isoform_ac": "I3L7V5-1", "url": "https://www.uniprot.org/uniprotkb/F1SAY2/entry#I3L7V5-1", "sequence": { "sequence": "MEVVRCPQHGTLCFLKTGVRDGPNKGKSFYVCPADTCNFLRATDIPVSHCLLHEGMVVELQGLFLPQGKKEYSQQRNPFKVLDKNQEPSLWKQFIKGEDEEKTAHKKQKEKGHPLLDQDNVQKPESKCWMEKDLSSGLVVKEKPSAVQEKQRGEKTEFQCDTKELEGMHQRKVFEMKSRQVHKDELREPPVSQETANGDSYIRKESEPPRKEETKPLPRTVPSQHPINQPQKGGHLSQEHPQSWEVRETKTKDDPSCSQTLQKRLLQGHSHAQSETRDVSALKEPAAQPAPPATRHPRGEREDVDTSSGDSEEDDVVFVSSEPGSPLLFDLTPDSQKKENLKFPGQSEQRKISPASGVCKKGEPLDPAAQRVHLTAQLKQKKSTLASVNLQALPDKGQKLFKQIQELEEALGALALYPEQDVNEKRNTQVPQQRNATKTSSDPPHLVPPRPLQGQDLQPLASLGLKAARQEIAGGSGQCRGGPTSQDRLHSVWKVTSEAIDELHRSLESRPDETAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPPGGILADDMGLGKTLTMIALILTQKNQEKNKEKDKTTSSTWLSKTDSSEFTSHRTLIICPASLIHHWKNEVQKRVCNNELRVYLYHGPNRDQNAKVLSMYDIVITTYSLLAKEIPTKEQEGAVPGAELSVQGTASPLLRIVWARIILDEAHTVKNPRVQTSMAVCKLQAQARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFSLWKSQVDNGSKKGGERLNILTKSLLLRRTKDQLDSTGKPLVELPQRQFQLHRLKLSEDEETVYNVLFARSRSDLQSYLKRYETGDRSSARSPDNPFNKVAQEFGSDGPRRPVAGDLQGSSTVHILSQLLRLRQCCCHLSLLKSALDPTELKSEGLVLSLEEQLSALTLSELHSSESSASVSLNGTCFKVELFDSMRQSTKISSLLAELEAIRRNSGSQKSVIVSQWTSMLEVVALHLKRHRVTYATIDGSVNPKQRMDLVEAFNSSGGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQASDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQILSGSGEFVTKLTLADLKILFGI", "length": 1119, "header": "tr|I3L7V5-1|I3L7V5_PIG Computationally mapped isoform of Transcription termination factor 2 OS=Sus scrofa OX=9823 GN=TTF2 PE=3 SV=4 CANONICAL=F1SAY2-1" }, "locus": { "chromosome": "4", "start_pos": 103676412, "end_pos": 103633116, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031433.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031433.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020113.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020113.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4IFG3-1", "protein_name": "Transcription termination factor 2", "gene_name": "ttf2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MERVLCERHGSTCLLKTGVKEGPNKGKSFYVCTARDATPCNFTLPTQIPASHCLQHEDSVVELQTLIYNKKQDKYKLFYRCMLGKTEGQKWCGCVPWKEKDPDRQTDLLENLQSSSLTLVRNPFKVKIKQDKALKLRSDPDAEKDRGEVNDENKHANVQDNDKKRDERTGTTEREGNNKKGPAVHSDTERRDSADSESWRNKTLPTGMKIKKRVSDDEKPKSAAEDETCPESSNPVKENDKGQTESENNLKDQQEQSPRKTGGSAQSPSKSSPGLDKKTSNKQSTSNSKSGSDKTQSQSPSCSTSQNGTVSEKPTALDVQKIEPNQSKNKDQSGIACFGEWSDEDDDVLVISVQPPSQQSAPTPAVPVQKTITSYPGFQIASKVQGQSEDPRALHSQLKTQLKQKKATLSVVNVSALPDKGERLKRQVKDLEEALESLSLTAVSESQDKDRAEAEHKTAHSFSNPFSCPGGTILLPTAPAAMLKESSSASLGLNLSQGYSQMFGVNPQSQAFYGGRMTENRLLAVRNATTEAIDHLHDSLESCPTENTEAHDPKGLKVELLPHQKRALTWLLWRETQKPCGGILADDMGLGKTLTMIALILSQKKKDEKLEEWISKHGSSIVASQGTLIICPASLVHHWKKEIDKRVKSSRLTVYLYHGPNRQRSASVLAEHDVVITTYSLVSKEIPVQKEDAEKPSKDSDHVASDLPPLLRVAWARVILDEAHSIKNPKVQTSMAVCKLRARSRWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLWKAQVDNGSKRGGERLNILTRALLLRRTKDQLDATGKPLVSLPDRTCEIHRLKLSEDEQAVYDVVFAQSRSTLQNYLKRHEDGNTKKGDTSNPFEKVAREFGMSQQDSQSSSQQPQASSTIHILSLLLRLRQCCCHLSLLKKTLDQSELQGDGVALSLEEQLCALSLSEPSDSENKDTVSLNGSHFSSELFQDTRESTKISSILTELKEIRKKDQKSVIVSQWTSMLKIVAVHLEKMGLKFAVIDGTVNPKRRMDLVEEFNTNPKGPQVMLVSLCAGGVGINLIGGNHLFLIDMHWNPALEDQACDRIYRVGQSKDVTIHRFVCDGTVEDKISSLQEKKKELAQKVLSGTGSSFTKLSLADLRVIFGV", "length": 1145 }, "evidence": [ { "id": "F1SAY2", "url": "https://omabrowser.org/oma/group/F1SAY2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8I6A6T9-1", "protein_name": "Transcription termination factor 2", "gene_name": "Ttf2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVIKCPEHGKVPVSGFPSWGLWNWLAGAIADLLVSSGAVCFLKTGVRDGPNKGKSFYVCRTNTCGFVQATDIPVSHCLLHEEFVVELQGLFLPQGKKEWRLFFRCARTKAEGKRWCGDVPWQDPNPKGHSVTCKPQLASESLPHPPSQPRNPFRVLNKNQKTLEWKQFVEGEGEIKTADKKLRENREQLLDQKKEQKPKSKCRMEKDPSSDLVVTRQSGGDGEEQEEKTKFRPKTKETEEMTSKQGHGEVLQGTSKVPQISESESQEIPNKPEALSEKETHLLLQSIPGQNPESKVQKEGHLIREQLKNGDKTGADAHSAQASQTGLSQGSLQGPSKTWRPTPKARVAPGVCSGSVHHATSSSDDSEDDGRPGSPLLFDLTIDSQKKGSLQHSDQSVQRQTAAASGVSKKGESSDLAAQRANLTTQLKQKKGTLAAVNIQALPDKGEKLLKQIQALEDALNALALSPEQGTRENCSSQEPEQSKVTETAAAGPLHLVPPQPLPRPHIQPAASLGLKASRQETPEGASQCSGGHTNEHRLYNVWKITSEAIDELHRSLESCPGKTAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTKKNQQKSKEKDRSLPVMWLSKNDSSVFTSTGTLIVCPASLIHHWKNEIEKRVNSNKLRIYLYHGPNRIQHAKVLSTYDIVITTYSLLAKEIPTAKHEGEVPGAKLSVEGISAPLLQVVWARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPFDEFSLWKSQVDNGSMKGGERLSILTKSLLLRRTKDQLDSTGKPLVPLPARSCQLHRLKLSEDERAVYDVFLARSRSALQSYLKRQEGRGSHPGRSPENPFSRVAQEFGSGVPQCSTAADSRRPSTVHVLSQLLRLRQCCCHLSLLKSVLDPKELESEGLVLSLEEQLSALTLSKVDVSEPSPTVSLNGTCFKVELFDDIRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLRKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQEKDVVMHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSGGPVTKLTLADLKILFGI", "length": 1170 }, "evidence": [ { "id": "F1SAY2", "url": "https://omabrowser.org/oma/group/F1SAY2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0XP21-1", "protein_name": "Transcription termination factor 2", "gene_name": "TTF2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAVVCAEHGSLCLLKTGVRDGPNKGKSFYVCGAQGPAPCGFVLPADIPPSYCLVHEGYVVELQILVPQQHADEYQLFYRCANSKLNGKKWCGSVPWQDSKATKASKKSESQPKKAPVFNPSGQRNPFKVIDKNCEASSWKQIKRGSGEECKAKGVEAEKDNVVESHKEKKSTSGSSTEKEDLEELKTVKKQSKECRSDPELKESAVSESKLCLSETWKGKNTHQDKEKYGGSVRESKKSEHVEKEPGGRSELFPVSFEKQSTSSKSPEKEQFRDKSLKNCGDREAREKECIGGKNGEMKPIPKENTTSTTVPQAASQHALLKPGAGAAPSKTQVRPSLEKPADGVSDSDRDKVVLVYSSSNEGEPKKSVEGLLPRVVPAGTSGKSTQETSLLRAAASLHMEGPRDPKALRNHLEIQLRQKKSTLATVNIQVLPDKGQRLVKEVQDLEAALSALNISTTDTIEKGENSASGGRCGEPLPNSFSRPGGTKLITPLPLGDHKAGTSSSSHSHPSAAALGSSEYFGHGFGMNSGVQNLYGGRMTEVRIRAVHSAISDAINHLHKSLESCPAEQTVAEDPSGLKVPLLLHQRQALAWLLWRESQRPCGGILADDMGLGKTLTMIALILTQKQMKTEKGSKKLEVWLSRNDSTVIPSCSTLIICPASLIHHWKKEIDRHVSFGKLRVYLYHGPNREKHAEVLSEYDIVVTTYSLLSKEVPTSKEEGEFPAKDHEVGSGSSACSPLLRVAWARVILDEAHTIKNPKVQTSIAVCKLRANARWAVTGTPIQNNLLDMYSLLRFLRCSPFDEYKVWKYQVDNNTKKGGDRLSLLTRSLLLRRTKDQLDSTGKPLVSLPQRSMQLHQLKLSAEELSVYNVLFARSRSTLQSYLKRQEQKNESREHAGSNPFEKVAQDFGCSQKEFLASSQSAVQVSSTAHVLSMLLRLRQCCCHLSLLKVALDQANLANEGLSLSIEEQLSALTLSELQTPDSKSTVYLNGTAFNTDLFEISKESTKVSHLLAELKTIQSCSETQKSVVVSQWTSMLKVVAVHLQRLGLKYSMLDGSVNPKQRMDVVEEFNNNPKGPQVMLVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQTRKKGLAQQVLAGKGETSKLTLADLKTLFGI", "length": 1178 }, "evidence": [ { "id": "F1SAY2", "url": "https://omabrowser.org/oma/group/F1SAY2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q5NC05-1", "protein_name": "Transcription termination factor 2", "gene_name": "Ttf2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLVKCPEHGDACFLKTGVRDGPNKGKSFYVCRTNTCGFVQATDIPVSHCLLHEEFVVELQGLFLPQDKKEWRLFFRCARTKAEGKQWCGNVPWRQDPNPKELSVTSKPQQPSESQLHSPSQPRNPFRVLNKNQKTLERKQFVEEGERKTADKKLRENNEQLLDQRKEQKPKSNSRMEKDPSSDLVATRQSGGDREEQEKSKFQPKTKKAEGMASKQGHGEVLQGIPKGPHMSESESRGVPNKPETLREKETQLLVPSVPGQNPESKVQKEGHVSREPLKNGEAPSAQVTQRGLAQGPLQGPSKTWRPVPEAPAAPELCSGMAHHATSSSEDSEDDGVSSRPGSPLLFDSTVDSQKKGSLQHSDQSVQRQMPAASGVSKKGDSSDPAAQRANLTTQLKQKKGTLAAVNIQALPDKGEKLLKQIQALEDALSALALSPEQGTKEKCSAQEPEQSNITKAAAAPLHLVPPQPLPRPLIQPASSLGLKAGRQETPEGASQCSGGHMNQHHLYNVWKITSEAIDELHRSLKSCPGETAVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTKKNQQKSKEKERSEPVTWLSKNDSSVFTSSGTLIVCPASLIHHWKNEVEKRVTSNRLRIYLYHGPNRSRHAKVLSTYDIVITTYSLLAKEIPTTKQEGEVPGANLSVEGTSAPLLQVVWARIILDEAHNVKNPRVQTSIAVCKLQAQARWAVTGTPIQNNLLDMYSLMKFLRCSPFDEFSLWKSQVDNGSMKGGERLSILTKSLLLRRTKDQLDSTGKPLVALPARRCQLHRLKLSEDERAVYDIFLARSRSALQSYLKRQEGRGSHHGRSPDNPFSRVAQEFGSSVSQGCPAADSQRPSTVHVLSQLLRLRQCCCHLSLLKSALDPTELESEGLVLSLEEQLSALTLSKVDVSEPSPTVSLNGTCFKAELFDDTRRSTKVSSLLAELEAIQKGPGSQKSVIVSQWTSMLQVVALHLKKNRLTYATIDGSVNPKQRMDLVEAFNHSQGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQKKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSEGPVTKLTLADLKILFGI", "length": 1138 }, "evidence": [ { "id": "F1SAY2", "url": "https://omabrowser.org/oma/group/F1SAY2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UNY4-1", "protein_name": "Transcription termination factor 2", "gene_name": "TTF2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEVRCPEHGTFCFLKTGVRDGPNKGKSFYVCRADTCSFVRATDIPVSHCLLHEDFVVELQGLLLPQDKKEYRLFFRCIRSKAEGKRWCGSIPWQDPDSKEHSVSNKSQHASETFHHSSNWLRNPFKVLDKNQEPALWKQLIKGEGEEKKADKKQREKGDQLFDQKKEQKPEMMEKDLSSGLVPKKKQSVVQEKKQEEGAEIQCEAETGGTHKRDFSEIKSQQCQGNELTRPSASSQEKSSGKSQDVQRESEPLREKVTQLLPQNVHSHNSISKPQKGGPLNKEYTNWEAKETKAKDGPSIQATQKSLPQGHFQERPETHSVPAPGGPAAQAAPAAPGLSLGEGREAATSSDDEEEDDVVFVSSKPGSPLLFDSTLDLETKENLQFPDRSVQRKVSPASGVSKKVEPSDPVARRVYLTTQLKQKKSTLASVNIQALPDKGQKLIKQIQELEEVLSGLTLSPEQGTNEKSNSQVPQQSHFTKTTTGPPHLVPPQPLPRRGTQPVGSLELKSACQVTAGGSSQCYRGHTNQDHVHAVWKITSEAIGQLHRSLESCPGETVVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGLGKTLTMIALILTQKNQEKKEEKEKSTALTWLSKDDSCDFTSHGTLIICPASLIHHWKNEVEKRVNSNKLRVYLYHGPNRDSRARVLSTYDIVITTYSLVAKEIPTNKQEAEIPGANLNVEGTSTPLLRIAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEFNLWRSQVDNGSKKGGERLSILTKSLLLRRTKDQLDSTGRPLVILPQRKFQLHHLKLSEDEETVYNVFFARSRSALQSYLKRHESRGNQSGRSPNNPFSRVALEFGSEEPRHSEAADSPRSSTVHILSQLLRLRQCCCHLSLLKSALDPMELKGEGLVLSLEEQLSALTLSELRDSEPSSTVSLNGTFFKMELFEGMRESTKISSLLAELEAIQRNSASQKSVIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGGVGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKKDLAKQVLSGSGESVTKLTLADLRVLFGI", "length": 1162 }, "evidence": [ { "id": "F1SAY2", "url": "https://omabrowser.org/oma/group/F1SAY2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "helicase activity", "id": "GO:0004386", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004386", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "ATP-dependent activity, acting on DNA", "id": "GO:0008094", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008094", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA repair", "id": "GO:0006281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006281", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "RNA splicing", "id": "GO:0008380", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008380", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" }, { "name": "DNA-templated transcription termination", "id": "GO:0006353", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006353", "evidence": [ { "database": "UniProtKB", "id": "F1SAY2", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1064, "end_pos": 1066, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1239, "end_pos": 1241, "annotation": "n_glycosylation_sequon" }, { "start_pos": 12, "end_pos": 14, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1320, "end_pos": 1322, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1340, "end_pos": 1342, "annotation": "n_glycosylation_sequon" }, { "start_pos": 742, "end_pos": 744, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "13065", "name": "", "equation": "ATP + H2O = ADP + phosphate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "13065", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/13065" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SAY2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1426, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SAY2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SAY2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SAY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" }, { "id": "PS51999", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51999" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GRF-type", "eco_id": "ECO_0000259", "start_pos": 266, "end_pos": 306, "start_aa": "Cys", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SAY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" }, { "id": "PS51192", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51192" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Helicase ATP-binding", "eco_id": "ECO_0000259", "start_pos": 847, "end_pos": 1050, "start_aa": "Trp", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SAY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SAY2" }, { "id": "PS51194", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51194" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Helicase C-terminal", "eco_id": "ECO_0000259", "start_pos": 1256, "end_pos": 1421, "start_aa": "Lys", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1064, "end_pos": 1066 }, { "start_pos": 1239, "end_pos": 1241 }, { "start_pos": 12, "end_pos": 14 }, { "start_pos": 1320, "end_pos": 1322 }, { "start_pos": 1340, "end_pos": 1342 }, { "start_pos": 742, "end_pos": 744 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SB15-1", "uniprot_ac": "F1SB15", 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"https://www.uniprot.org/uniprotkb/F1SB15/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SB15", "url": "https://www.uniprot.org/uniprotkb/F1SB15" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NT5M", "url": "https://www.uniprot.org/uniprotkb/F1SB15", "locus": { "chromosome": "12", "start_pos": 60979499, "end_pos": 60994582, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000018052", "url": "https://www.ensembl.org/id/ENSSSCG00000018052" } ] } } ], "crossref": [ { "id": "F1SB15", "url": "https://alphafold.ebi.ac.uk/entry/F1SB15", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000018052", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000018052", "database": "Bgee", 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"categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049628", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049628", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513248", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513248", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VTRWSPK", "url": "https://omabrowser.org/oma/group/VTRWSPK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SB22", "url": "https://www.orthodb.org/?gene=F1SB22", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12844", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12844", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12844:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12844:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00595", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00595", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06663", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06663", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10534", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10534", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020942262", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020942262", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SB22", "url": "https://www.uniprot.org/uniprotkb/F1SB22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SB22-1", "url": "https://www.uniprot.org/uniprotkb/F1SB22-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPVTKWSPKQVVDWTRGLDDCLQQYVHKFEREKINGEQLLQISHQDLEELGVTRIGHQELVLEAVDLLCALNYGLETDNMKNLVLKLRASSHNLQNYISGRRKSPAYDGNTSHKPPNEFLTSVVELIGAAKALLAWLDRTPFTGITDFSVTKNKIIQLCLDLTTTVQKDCLVAEMEDKVLTVVKVLNGICDKTIRSATDPVMSQCACLEEVHLPNIKPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNQQTVVGWQLKNLVRKLRENPTGVVLLLKKRPTSSFNFTPAPLKNLRWRPPLVQTSPLPTTTQSPDSTMDASLKKEKPAILDLYIPPPPAIPYSPREENGSAGYGGVSKCKQPLPGPKGSESPNSFLDQESRRRRFTIADSDQLPGYSVETNVLPTKMREKTPSYGKPRPLSMPADASWMGIVDPFARPRGHGRKGEDALCRYFSNERIPPIIEESSAPPYRFSRPPTERQLVRGADYIRGSRCYLSSDLHSSATIPFQEEGTKKKAGPSAARSSSAEPSLLVSWFTRLKLLTH", "length": 555, "header": "tr|F1SB22-1|F1SB22_PIG Isoform 1 of CNKSR family member 3 OS=Sus scrofa OX=9823 GN=CNKSR3 PE=3 SV=3 CANONICAL=F1SB22-1" }, "isoforms": [ { "isoform_ac": "F1SB22-1", "url": "https://www.uniprot.org/uniprotkb/F1SB22/entry#F1SB22-1", "sequence": { "sequence": "MEPVTKWSPKQVVDWTRGLDDCLQQYVHKFEREKINGEQLLQISHQDLEELGVTRIGHQELVLEAVDLLCALNYGLETDNMKNLVLKLRASSHNLQNYISGRRKSPAYDGNTSHKPPNEFLTSVVELIGAAKALLAWLDRTPFTGITDFSVTKNKIIQLCLDLTTTVQKDCLVAEMEDKVLTVVKVLNGICDKTIRSATDPVMSQCACLEEVHLPNIKPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNQQTVVGWQLKNLVRKLRENPTGVVLLLKKRPTSSFNFTPAPLKNLRWRPPLVQTSPLPTTTQSPDSTMDASLKKEKPAILDLYIPPPPAIPYSPREENGSAGYGGVSKCKQPLPGPKGSESPNSFLDQESRRRRFTIADSDQLPGYSVETNVLPTKMREKTPSYGKPRPLSMPADASWMGIVDPFARPRGHGRKGEDALCRYFSNERIPPIIEESSAPPYRFSRPPTERQLVRGADYIRGSRCYLSSDLHSSATIPFQEEGTKKKAGPSAARSSSAEPSLLVSWFTRLKLLTH", "length": 555, "header": "tr|F1SB22-1|F1SB22_PIG Isoform 1 of CNKSR family member 3 OS=Sus scrofa OX=9823 GN=CNKSR3 PE=3 SV=3 CANONICAL=F1SB22-1" }, "locus": { "chromosome": "1", "start_pos": 12395684, "end_pos": 12298174, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004500.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004500.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004398.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004398.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SB22", "url": "https://www.uniprot.org/uniprotkb/F1SB22" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513248", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513248", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XMP1-1", "protein_name": "CNKSR family member 3", "gene_name": "CNKSR3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPVTKWSPKQVVDWTKGLDDCLQQYVHKFEREKINGEQLLQISHQDLEDMGITRIGHQELVLEAVDLLCALNYGLETDNMKNLVLKLRASSNNLQNYICTRRKSSNYDGNTSRKPPNEFLTSVVELIGAAKALLAWLDRTPFTGIADFSSMKNRIIQLCLDLTTTVQKDCTVADMEDKVQTVSKALNGICDKAIRSTTDPLMSQCACLEEVHLTNIRPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNQQTVVGWQLKNLVAKLRENPAGVRLLLKKRPTGSFHFTPAPLKNLRWKPPLVQTSPPPTSTQSPESTMDTSVKKEKPAILDLYIPPPPAVPYSPRDEKGSFLYGGGSKPSHPLLGSKGAESPNSFLDQESRRRRFTIADSDQLPGYHMEANILPAKMREKTQSYGKPRPLSMPADGSWIGAAEPFSRPRAPGRKGKILGEDVLCRYFSNERIPPIIEESPSTQHPFSRPMSEKQLVRGMDYIRGSRCFMNTDLHNSATIPFQEEGAKKSSVTSSTKSSSAEPSLLVSWITRLKLLTH", "length": 559 }, "evidence": [ { "id": "F1SB22", "url": "https://omabrowser.org/oma/group/F1SB22/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9TEZ9-1", "protein_name": "CNKSR family member 3", "gene_name": "CNKSR3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEPVTKWSPKQVVDWTRGLDDCLQQYVHKFEREKINGEQLLQISHQDLEELGVTRIGHQELVLEAVDLLCALNYGLETDNMKNLVLKLRASSHNLQNYISSRRKSPAYDGNTSHKPPNEFLTSVVELIGAAKALLAWLDRAPFTGITDFSVTKNKIIQLCLDLTTTVQKDCLVAEMEDKVLAVVKVLNGICDKTIRSTTDPVMSQCACLEEVHLPNIKPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNQQTVVGWQLKNLVRKLRENPTGVVLLLKKRPTSSFNFTPAPLKNLRWKPPLVQTSPPTTTTQSPDSTMDASLKKEKPAILDLYIPPPPSVPYSPREENGGSVYGFSKCKQPQPGPKGSESPNSFLDQESRRRRFTIADSDQLPGYSVETNILPAKMREKTPSYGKPRPLSMPADASWMGIVDPFARPRGHGRKSEDALCRYFSNERIPPILEESSSPTYRFSRPGTERQLVRGADYIRGSRCYITSDLHSSATIPFPEEGTKKKAGSSAAKSSSPEPSLLVSWLTRLKLLTH", "length": 554 }, "evidence": [ { "id": "F1SB22", "url": "https://omabrowser.org/oma/group/F1SB22/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3GU34-1", "protein_name": "Connector enhancer of kinase suppressor of ras 3 isoform X1", "gene_name": "Cnksr3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEPVTKWSPKQVVDWTRGLDDCLQPYVHKFEREKIDGEQLLKISHQDLEELGVTRIGHQELVLEAVDLLCALNYGLETDNMKNLALKLRASSHNLQNYISSRRKSSAYDGNTSRKPPNEFLTSVVELIGAAKALLAWLDRAPFTGITDFSVTKNKIIQLCLDLTTTVQKDCLVAEMEDKVLNVVKVLNGICDKTMRSTSDPVMSQCACLEEVHLPNVRPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNRQTVVGWQLKNLVRKLRENPTGVVLLLKKRPTGSFNFTPAPLKNLRWKPPLVQTSPPPTTTQSPESTMDASLKKEKPAILDLYIPPPPAVPYSPRDENRSFAYGGSSKGKQQLSGRKGSESPNSFLDQESQRRRFTIADSDQLPAYSVGTNVLPTKMRKKTPSYGKPRPLSMPADGNWMGIVDPFARPRGPGRKGDDALCRYFSNERITPIIEESASPVYRFSRPTTERHLVRGADYIRGSRCYLNSDLHSSATIPFQEEGPKKKSATSSAKASSGEPSLLVSWLTRLKLLTH", "length": 555 }, "evidence": [ { "id": "F1SB22", "url": "https://omabrowser.org/oma/group/F1SB22/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5SGD7-1", "protein_name": "Connector enhancer of kinase suppressor of ras 3", "gene_name": "Cnksr3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVTKWSPKQVVDWTRGLDDCLQPYVHKFEREKIDGEQLLKISHQDLEELGVTRIGHQELVLEAVDLLCALNYGLETDNMKNLVLKLRASSHNLQNYISSRRKSPAYDGNTSRKPPNEFLTSVVELIGAAKALLAWLDRAPFTGITDLSVTKNKIIQLCLDLTTAVQKDCLVAEMEDKVLNVVKVLNGICDKMMHSTTDPVMSQCACLEEVHLPNVRPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNRQTVVGWQLKNLVKKLRENPTGVVLLLKKRPTGSFSFTPAPLKNLRWKPPLVQTSPPPTTTQSPESTMDASLKKEKPAILDLYIPPPPAVPYSPRDENVSFSYRGHTKSKQPLPGRKGSESPNSFLDQESQRRRFTITDSDQLPGYSVGTNILPIKMRGKTPSYGKPRPLSMPADGNWMGIVDPFAKPRGHGRKGEDALCRYFSNERITPIIEESASPVYRFSRPLTERHLVRGADYIRGSRCYINSDLHSSATIPFQEEGPKKKSASSSAKASSGEPSLLVSWLTRLKLLTH", "length": 555 }, "evidence": [ { "id": "F1SB22", "url": "https://omabrowser.org/oma/group/F1SB22/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6P9H4-1", "protein_name": "Connector enhancer of kinase suppressor of ras 3", "gene_name": "CNKSR3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPVTKWSPKQVVDWTRGLDDCLQQYVHKFEREKINGEQLLQISHQDLEELGVTRIGHQELVLEAVDLLCALNYGLETDNMKNLVLKLRASSHNLQNYISSRRKSPAYDGNTSRKAPNEFLTSVVELIGAAKALLAWLDRAPFTGITDFSVTKNKIIQLCLDLTTTVQKDCFVAEMEDKVLTVVKVLNGICDKTIRSTTDPVMSQCACLEEVHLPNIKPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNQQTVVGWQLKNLVKKLRENPTGVVLLLKKRPTGSFNFTPAPLKNLRWKPPLVQTSPPPATTQSPESTMDTSLKKEKSAILDLYIPPPPAVPYSPRDENGSFVYGGSSKCKQPLPGPKGSESPNSFLDQESRRRRFTIADSDQLPGYSVETNILPTKMREKTPSYGKPRPLSMPADGNWMGIVDPFARPRGHGRKGEDALCRYFSNERIPPIIEESSSPPYRFSRPTTERHLVRGADYIRGSRCYINSDLHSSATIPFQEEGTKKKSGSSATKSSSTEPSLLVSWFTRLKLLTH", "length": 555 }, "evidence": [ { "id": "F1SB22", "url": "https://omabrowser.org/oma/group/F1SB22/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BMA3-1", "protein_name": "Connector enhancer of kinase suppressor of ras 3", "gene_name": "Cnksr3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPVTKWSPKQVVDWTRGLDDCLQPYVHKFEREKIDGEQLLKISHQDLEELGVTRIGHQELVLEAVDLLCALNYGLETDTMKNLVLKLRASSHNLQNYISSRRKSPAYDGNTSRKPPNEFLTSVVELIGAAKALLAWLDRAPFTGITDLSVTKNKIIQLCLDLTTAVQKDCLIAEMEDKVLNVVKVLNGICDKTMRSTTDPVMSQCACLEEVHLPNVRPGEGLGMYIKSTYDGLHVITGTTENSPADRSQKIHAGDEVIQVNRQTVVGWQLKNLVRKLRENPTGVVLLLKKRPTGSFSFTPAPLKNLRWKPPLVQTSPPPTTTQSPESTMDASLKKEKPAILDLYIPPPPAVPYSPRDENVSFGYRGHSKSKQPLPVRKGSESPNSFLDQESQRRRFTIADSDQLPGYSVETNVLPTKMRGKTPSYGKPRPLSMPADGNWMGIVDPFAKPRGNGRKGEDALCRYFSNERITPITEESASPMYRFSRPLTERHLVRGADYIRGSRCYINSDLHSSATIPFQEEGSKKKSASSSAKASSGEPSLLVSWLTRLKLLTH", "length": 555 }, "evidence": [ { "id": "F1SB22", "url": "https://omabrowser.org/oma/group/F1SB22/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SB22", "url": "https://www.uniprot.org/uniprotkb/F1SB22" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SB22", "url": "https://www.uniprot.org/uniprotkb/F1SB22" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "F1SB22", "url": "https://www.uniprot.org/uniprotkb/F1SB22" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "regulation of signal transduction", "id": "GO:0009966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009966", "evidence": [ { "database": "UniProtKB", "id": "F1SB22", "url": "https://www.uniprot.org/uniprotkb/F1SB22" } ], "pmid": "" }, { "name": "enzyme-linked receptor protein signaling pathway", "id": "GO:0007167", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007167", "evidence": [ { "database": "UniProtKB", "id": "F1SB22", "url": "https://www.uniprot.org/uniprotkb/F1SB22" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 111, "end_pos": 113, "annotation": "n_glycosylation_sequon" }, { "start_pos": 298, "end_pos": 300, "annotation": "n_glycosylation_sequon" }, { "start_pos": 360, "end_pos": 362, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SB22-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 555, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SB22-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SB22" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SB22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB22" }, { "id": "PS51290", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51290" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CRIC", "eco_id": "ECO_0000259", "start_pos": 80, "end_pos": 174, "start_aa": "Asn", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SB22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB22" }, { "id": "PS50106", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50106" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PDZ", "eco_id": "ECO_0000259", "start_pos": 211, "end_pos": 293, "start_aa": "Glu", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SB22", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB22" }, { "id": "PS50105", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50105" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SAM", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 72, "start_aa": "Trp", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 111, "end_pos": 113 }, { "start_pos": 298, "end_pos": 300 }, { "start_pos": 360, "end_pos": 362 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SB34-1", "uniprot_ac": "F1SB34", "uniprot_id": "F1SB34_PIG", "mass": { "chemical_mass": 97093.0, "monoisotopic_mass": 97093.0 }, "refseq": {}, "gene_names": [ { "name": "CDHR3", "type": "recommended", "evidence": [ { "id": "F1SB34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB34" } ] } ], "protein_names": [ { "name": "Cadherin-related family member 3", "type": "recommended", "evidence": [ { "id": "F1SB34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB34/entry#names_and_taxonomy" } ] }, { "name": "Cadherin-like protein 28", "type": "synonym", "evidence": [ { "id": "F1SB34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB34/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.", "evidence": [ { "database": "UniProtKB", "id": "I3LET8", "url": "https://www.uniprot.org/uniprotkb/I3LET8#function" }, { "database": "UniProtKB", "id": "ARBA00037319", "url": "https://www.uniprot.org/uniprotkb/ARBA00037319#function" }, { "database": "UniProtKB", "id": "F1SB34", "url": "https://www.uniprot.org/uniprotkb/F1SB34#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SB34", "url": "https://www.uniprot.org/uniprotkb/F1SB34" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CDHR3", "url": "https://www.uniprot.org/uniprotkb/F1SB34", "locus": { "chromosome": "9", "start_pos": 105893688, "end_pos": 105822868, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015433", "url": "https://www.ensembl.org/id/ENSSSCG00000015433" } ] } } ], "crossref": [ { "id": "F1SB34", "url": "https://alphafold.ebi.ac.uk/entry/F1SB34", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015433", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015433", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11304", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11304", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002126", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002126", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015919", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015919", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039808", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039808", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24027", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24027", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24027:SF439", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24027:SF439", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00028", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00028", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SB34", "url": "https://www.uniprot.org/uniprotkb/F1SB34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SB34-1", "url": "https://www.uniprot.org/uniprotkb/F1SB34-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LET8", "url": "https://www.uniprot.org/uniprotkb/I3LET8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LET8-1", "url": "https://www.uniprot.org/uniprotkb/I3LET8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQAAILSLLLLGALSEGQALHLIHLPATGNVAENSPPETSVHKFSVKLSASLSPVMPGFPLIINSSPLTEAFRVNWLSGTDFEVVTTGKEQLDFETGPHIFDLQIYVKDDVGVTDLQILTVQVTDVNEPPEFQGNLAKGLDLSIVEGANPGFLYQFEAFDPEDTRQNIPLSYFLIPSSENFTMSNNATLFSTTEFDFEAGHRSYHFVVEVRDSQGLKASTALRINIVNINDEVPRFTSPRRVYRIPEELGPGTIVANITAEDPDDKGFTSFLLYSITTVNSYFMINQLTGTIHVARRLNRDAGELRQNPAISLEVLVRDRPFGGQENRKQITFIVEDINDNPSTCTKFTFSIMVPERAAKGTLLLDLNKFCFDDDSEAPNNQFNFTTPSGVGSSGRFLQDPAGSGKIVLIGDLDYENPSNLAAGNKYTVIIQVQDVAPPYYKNNIYIYILTSPENEFPLVFDSPSYVFAVSELSPARTRIGQVHATDKDLPQGDIVYSISTGGASLQYPNIFWINPQTGELQLVTKADYETSPVHILRVQATNSEDSSSVTVTVNILEENDEKPICTPNSYFLAIPVDLKVGTNIQNFKLTCTDLDSSPRSFRYSIGPGNINRHFTFSPNAGSNVTSLLLATRFDYVSGLDKIWNYKLLVYITDDNLLSGRKRAGALVETGTVTLSISVIPRPTTVVTTTPRPRVTYQILRKNVYSPSAWYVPFVITLGSVLLLGLLVSLIVLLAKAIYRHCPRKTGKHRTSLVKKGEMKDAKRELVVETIQMNTVFDGEAKDPVTGAIYEFNSKSGARRWKDPLTQMPKWKESRPQEAVTGEGTKPPGGSDKERDGLSSKAQAEDAGPGSRNQDGRPSTPKERNPALKSQVSPKLHPEK", "length": 880, "header": "tr|F1SB34-1|F1SB34_PIG Isoform 1 of Cadherin-related family member 3 OS=Sus scrofa OX=9823 GN=CDHR3 PE=4 SV=4 CANONICAL=F1SB34-1" }, "isoforms": [ { "isoform_ac": "F1SB34-1", "url": "https://www.uniprot.org/uniprotkb/F1SB34/entry#F1SB34-1", "sequence": { "sequence": "MQAAILSLLLLGALSEGQALHLIHLPATGNVAENSPPETSVHKFSVKLSASLSPVMPGFPLIINSSPLTEAFRVNWLSGTDFEVVTTGKEQLDFETGPHIFDLQIYVKDDVGVTDLQILTVQVTDVNEPPEFQGNLAKGLDLSIVEGANPGFLYQFEAFDPEDTRQNIPLSYFLIPSSENFTMSNNATLFSTTEFDFEAGHRSYHFVVEVRDSQGLKASTALRINIVNINDEVPRFTSPRRVYRIPEELGPGTIVANITAEDPDDKGFTSFLLYSITTVNSYFMINQLTGTIHVARRLNRDAGELRQNPAISLEVLVRDRPFGGQENRKQITFIVEDINDNPSTCTKFTFSIMVPERAAKGTLLLDLNKFCFDDDSEAPNNQFNFTTPSGVGSSGRFLQDPAGSGKIVLIGDLDYENPSNLAAGNKYTVIIQVQDVAPPYYKNNIYIYILTSPENEFPLVFDSPSYVFAVSELSPARTRIGQVHATDKDLPQGDIVYSISTGGASLQYPNIFWINPQTGELQLVTKADYETSPVHILRVQATNSEDSSSVTVTVNILEENDEKPICTPNSYFLAIPVDLKVGTNIQNFKLTCTDLDSSPRSFRYSIGPGNINRHFTFSPNAGSNVTSLLLATRFDYVSGLDKIWNYKLLVYITDDNLLSGRKRAGALVETGTVTLSISVIPRPTTVVTTTPRPRVTYQILRKNVYSPSAWYVPFVITLGSVLLLGLLVSLIVLLAKAIYRHCPRKTGKHRTSLVKKGEMKDAKRELVVETIQMNTVFDGEAKDPVTGAIYEFNSKSGARRWKDPLTQMPKWKESRPQEAVTGEGTKPPGGSDKERDGLSSKAQAEDAGPGSRNQDGRPSTPKERNPALKSQVSPKLHPEK", "length": 880, "header": "tr|F1SB34-1|F1SB34_PIG Isoform 1 of Cadherin-related family member 3 OS=Sus scrofa OX=9823 GN=CDHR3 PE=4 SV=4 CANONICAL=F1SB34-1" }, "locus": { "chromosome": "9", "start_pos": 105893504, "end_pos": 105823004, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016813.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016813.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016364.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016364.4" } ] } }, { "isoform_ac": "I3LET8-1", "url": "https://www.uniprot.org/uniprotkb/F1SB34/entry#I3LET8-1", "sequence": { "sequence": "MLFCILFKSAEGQALHLIHLPATGNVAENSPPETSVHKFSVKLSASLSPVMPGFPLIINSSPLTEAFRVNWLSGTDFEVVTTGKEQLDFETGPHIFDLQIYVKDDVGVTDLQILTVQVTDVNEPPEFQGNLAKGLDLSIVEGANPGFLYQFEAFDPEDTRQNIPLSYFLIPSSENFTMSNNATLFSTTEFDFEAGHRSYHFVVEVRDSQGLKASTALRINIVNINDEVPRFTSPRRVYRIPEELGPGTIVANITAEDPDDKGFTSFLLYSITTVNSYFMINQLTGTIHVARRLNRDAGELRQNPAISLEVLVRDRPFGGQENRKQITFIVEDINDNPSTCTKFTFSIMVPERAAKGTLLLDLNKFCFDDDSEAPNNQFNFTTPSGVGSSGRFLQDPAGSGKIVLIGDLDYENPSNLAAGNKYTVIIQVQDVAPPYYKNNIYIYILTSPENEFPLVFDSPSYVFAVSELSPARTRIGQVHATDKDLPQGDIVYSISTGGASLQYPNIFWINPQTGELQLVTKADYETSPVHILRVQATNSEDSSSVTVTVNILEENDEKPICTPNSYFLAIPVDLKVGTNIQNFKLTCTDLDSSPRSFRYSIGPGNINRHFTFSPNAGSNVTSLLLATRFDYVSGLDKIWNYKLLVYITDDNLLSGRKRAGALVETGTVTLSISVIPRPTTVVTTTPRPRVTYQILRKNVYSPSAWYVPFVITLGSVLLLGLLVSLIVLLAKAIYRHCPRKTGKHRTSLVKKGGASGTENSQRVEYRPNLFATPAHGGEMKDAKRELVVETIQMNTVFDGEAKDPVTGAIYEFNSKSGARRWKDPLTQMPKWKESRPQEAVTGEGTKPPGGSDKERDGLSSKAQAEDAGPGSRNQDGRPSTPKERNPALKSQVSPKLHPEK", "length": 900, "header": "tr|I3LET8-1|I3LET8_PIG Computationally mapped isoform of Cadherin-related family member 3 OS=Sus scrofa OX=9823 GN=CDHR3 PE=4 SV=3 CANONICAL=F1SB34-1" }, "locus": { "chromosome": "9", "start_pos": 105893504, "end_pos": 105831926, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025371.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025371.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022577.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022577.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SB34", "url": "https://www.uniprot.org/uniprotkb/F1SB34" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SB34", "url": "https://www.uniprot.org/uniprotkb/F1SB34" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "F1SB34", 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SB76-1", "uniprot_ac": "F1SB76", "uniprot_id": "F1SB76_PIG", "mass": { "chemical_mass": 41284.0, "monoisotopic_mass": 41284.0 }, "refseq": { "ac": "XP_003130280", "name": "protein FAM185A isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130280" }, "gene_names": [ { "name": "FAM185A", "type": "recommended", "evidence": [ { "id": "F1SB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB76" } ] }, { "name": "FAM185A", "type": "synonym", "evidence": [ { "id": "XP_003130280", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130280" } ] } ], "protein_names": [ { "name": "Family with sequence similarity 185 member A", "type": "synonym", "evidence": [ { "id": "F1SB76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SB76/entry#names_and_taxonomy" } ] }, { "name": "protein FAM185A isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003130280", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130280" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SB76", "url": "https://www.uniprot.org/uniprotkb/F1SB76" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FAM185A", "url": "https://www.uniprot.org/uniprotkb/F1SB76", "locus": { "chromosome": "9", "start_pos": 102969691, "end_pos": 102919961, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015414", "url": "https://www.ensembl.org/id/ENSSSCG00000015414" } ] } } ], "crossref": [ { "id": "F1SB76", "url": "https://alphafold.ebi.ac.uk/entry/F1SB76", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015414", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015414", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512804", "url": "https://www.ncbi.nlm.nih.gov/gene/100512804", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR025164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512804", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512804", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KTQSWFE", "url": "https://omabrowser.org/oma/group/KTQSWFE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AE59", "url": "https://www.orthodb.org/?gene=A0A287AE59", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SB76", "url": "https://www.orthodb.org/?gene=F1SB76", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34094", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34094", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34094:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34094:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13349", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13349", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003130280", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130280", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AE59", "url": "https://www.uniprot.org/uniprotkb/A0A287AE59", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AE59-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AE59-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R541", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R541", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R541-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R541-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SB76", "url": "https://www.uniprot.org/uniprotkb/F1SB76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SB76-1", "url": "https://www.uniprot.org/uniprotkb/F1SB76-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFTLRWGWGLGCLRLCQLRAWAPEASVPWACGACQARMYGSGGSKPEVSPSGPARPSLKEWALMVSPFGRLRARLPCHLAVKPLDPISHPDNNHVLVAVSGVEGAAQAVAGLQVTYDEAQKEVIIVSDVIDPQASVEVSAPLMFDLNIKSSGSGCVKVQNFECDNCRIETEQGTSILQSVKSQKLHIESKGGKVICLGTIYGNIDIHASDKSTVTVNKLQGSSVNISTEDGLLKAKYLYTESSFLSSAAGDISLGSVHGNITLQSKLGNITVDSSSGCLNASTHQGAIDVYVSHLGKVDLKSHKGSILVKVASSLQAYLQLSGKKIDVNSEVHVEEMNEAHKDDGVVITGLLNQASKNEKWIKADAPQGTISFRSQSWFQSLKLLD", "length": 386, "header": "tr|F1SB76-1|F1SB76_PIG Isoform 1 of Family with sequence similarity 185 member A OS=Sus scrofa OX=9823 GN=FAM185A PE=1 SV=2 CANONICAL=F1SB76-1" }, "isoforms": [ { "isoform_ac": "A0A287AE59-1", "url": "https://www.uniprot.org/uniprotkb/F1SB76/entry#A0A287AE59-1", "sequence": { "sequence": "MFTLRWGWGLGCLRLCQLRAWAPEASVPWACGACQARMYGSGGSKPEVSPSGPARPSLKEWALMVSPFGRLRARLPCHLAVKPLDPISHPDNNHVLVAVSGVEGAAQAVAGLQVTYDEAQKEVIIVSDVIDPQASVEVSAPLMFDLNIKSSGSGCVKVQNFECDNCRIETEQGTSILQSVKTVTVNKLQGSSVNISTEDGLLKAKYLYTESSFLSSAAGDISLGSVHGNITLQSKLGNITVDSSSGCLNASTHQGAIDVYVSHLGKVDLKSHKGSILVKVASSLQAYLQLSGKKIDVNSEVHVEEMNEAHKDDGVVITGLLNQASKNEKWIKADAPQGTISFRSQSWFQSLKLLD", "length": 355, "header": "tr|A0A287AE59-1|A0A287AE59_PIG Computationally mapped isoform of Family with sequence similarity 185 member A OS=Sus scrofa OX=9823 GN=FAM185A PE=1 SV=1 CANONICAL=F1SB76-1" }, "locus": { "chromosome": "9", "start_pos": 102966052, "end_pos": 102920212, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049275.1", "url": "https://www.ensembl.org/id/ENSSSCT00000049275.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042129.1", "url": "https://www.ensembl.org/id/ENSSSCP00000042129.1" } ] } }, { "isoform_ac": "A0A5G2R541-1", "url": "https://www.uniprot.org/uniprotkb/F1SB76/entry#A0A5G2R541-1", "sequence": { "sequence": "MFTLRWGWGLGCLRLCQLRAWAPEASVPWACGACQARMYGSGGSKPEVSPSGPARPSLKEWALMSQKLHIESKGGKVICLGTIYGNIDIHASDKSTVTVNKLQGSSVNISTEDGLLKAKYLYTESSFLSSAAGDISLGSVHGNITLQSKLGNITVDSSSGCLNASTHQGAIDVYVSHLGKVDLKSHKGSILVKVASSLQAYLQLSGKKIDVNSEVHVEEMNEAHKDDGVVITGLLNQASKNEKWIKADAPQGTISFRSQSWFQSLKLLD", "length": 269, "header": "tr|A0A5G2R541-1|A0A5G2R541_PIG Computationally mapped isoform of Family with sequence similarity 185 member A OS=Sus scrofa OX=9823 GN=FAM185A PE=1 SV=1 CANONICAL=F1SB76-1" }, "locus": { "chromosome": "9", "start_pos": 102966052, "end_pos": 102920212, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072372.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072372.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072206.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072206.1" } ] } }, { "isoform_ac": "F1SB76-1", "url": "https://www.uniprot.org/uniprotkb/F1SB76/entry#F1SB76-1", "sequence": { "sequence": "MFTLRWGWGLGCLRLCQLRAWAPEASVPWACGACQARMYGSGGSKPEVSPSGPARPSLKEWALMVSPFGRLRARLPCHLAVKPLDPISHPDNNHVLVAVSGVEGAAQAVAGLQVTYDEAQKEVIIVSDVIDPQASVEVSAPLMFDLNIKSSGSGCVKVQNFECDNCRIETEQGTSILQSVKSQKLHIESKGGKVICLGTIYGNIDIHASDKSTVTVNKLQGSSVNISTEDGLLKAKYLYTESSFLSSAAGDISLGSVHGNITLQSKLGNITVDSSSGCLNASTHQGAIDVYVSHLGKVDLKSHKGSILVKVASSLQAYLQLSGKKIDVNSEVHVEEMNEAHKDDGVVITGLLNQASKNEKWIKADAPQGTISFRSQSWFQSLKLLD", "length": 386, "header": "tr|F1SB76-1|F1SB76_PIG Isoform 1 of Family with sequence similarity 185 member A OS=Sus scrofa OX=9823 GN=FAM185A PE=1 SV=2 CANONICAL=F1SB76-1" }, "locus": { "chromosome": "9", "start_pos": 102966052, "end_pos": 102920212, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016789.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016789.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016341.2", "url": "https://www.ensembl.org/id/ENSSSCP00000016341.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SB76", "url": "https://www.uniprot.org/uniprotkb/F1SB76" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512804", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512804", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6A565-1", "protein_name": "Family with sequence similarity 185, member A", "gene_name": "Fam185a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFGRLPPCASRVRAGALFGALGTRTCGSGGAERRGSVPANPGAGLARGDLREWTLRVSPFGRLRARLPCHLSVRPLDPLAHPDGDRVLVAVSGVGSGTRGLDSLQVKYDAALQEMAILSDDIDPEASVEVNAPVKFDLNIESSGAGSVSVQNIECDSCKIDTEQGTSILQSVKSQKLHVNTKGGDVVCLGTIYGNIDIHASDKSTVTIDKLQGSCVNISTEDGLLQAKYLYTDSSFVSSAAGDIALGNIHGNIVLESKMGNISVDSSCGCLKASSDQGAIDVYISQLGEVVLTSQEGSIAVKAPSSLRAHLKLSGKEVVVDTEAHVQEMAKDRKGDGMTVTGLMNQGSKCERWINAIAPKGTVRFQHQSWFQSLKLPN", "length": 378 }, "evidence": [ { "id": "F1SB76", "url": "https://omabrowser.org/oma/group/F1SB76/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0Y2G3-1", "protein_name": "Family with sequence similarity 185 member A", "gene_name": "FAM185A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQALSPRWAPSVLRAAGGWCRGCSSSAELGGPKPLKEWTLVVGPRGRLRVRLPCQVSVRPLDPQRYPGADRVLVTVSGVERSARRHLEHVQVRYDEALQLLAIAAEGMDSKAAVDVRTPGKFDLDIKTSGTGCVKVQKMECDNCKIETEKGTSVLQSIKSHKIDIRTDGGKVIGLGTLYGNTDIHATEKGSVNIEKLQGTSINISTEYGLLKTKYLYAESSSLSSETGDILLGSIHGNTSLETKTGNITVDSSDGSLKASTLHGAIDVYVSQLREVDLKSQKGSITVKVPASLKAYLQLSGRKVDVSSEIELKETRSASKDDHVILSGHMNQRNETDKWIKADTQSGKVYLKSQSWIQSVKLKIS", "length": 365 }, "evidence": [ { "id": "F1SB76", "url": "https://omabrowser.org/oma/group/F1SB76/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9RT10-1", "protein_name": "Family with sequence similarity 185 member A", "gene_name": "FAM185A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFPFSGWGLGCLRLCLLRVWAGEATGRWACGTCQSRLYGSGGSQPEVSRSDPVRGTLKEWALLVSPFGRLRARLPCHLTVRPLDPLTYPDGDRVLVTVSGVEGGARALAGLQVNYDEAQKEVTIVADVIDHQASVEVNAPLKFDLNIQSSGSGCVKVQNIECDNCKIETEQGTSILQSVKSQKLHVQTTGGKVICLGTVYGNIDIHASDKSTVTVDKLQGSSVNISTEDGLLKVKYLYTESSFLSSAAGDITLGSVHGNITLRSKMGNITVDSSSGCLNALAQQGAIDVYVSQLGKVELKVPKGSILVKVPSSLQAYLQLSGKEIDVNSDVHVEEMNEAHRDDGVIITGFLNQTSKHEKWIKADAPKGTVRFRSQSWFQSLKLQD", "length": 385 }, "evidence": [ { "id": "F1SB76", "url": "https://omabrowser.org/oma/group/F1SB76/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q7TPD2-1", "protein_name": "Protein FAM185A", "gene_name": "Fam185a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFGRLPPCASRVRAGALVGALGARTCGSSGAQRQGSAPDDSGAGLARGALREWTLQVSPFGRLRARLPCHLAVRPLDPLAHPDGDRVQVAVCGVEHVARGLDSLQVKYDADRQEMAILSDDIDPQASVEVNAPVKFDLSIESSGSGSVKVQNIECDSCKIDTEQGTSILQSVKSQKLHVQTKGGDVICCGTVYGNIDIHASDKSTVSIEKLQGSCVNISTEDGLLQAKYLYTESSFLSSAAGNIALGNVHGNIILQSKMGNITVDSSCGCLKASSHQGAIDVYVSQLGEVALTTEEGSIAVKAPSSLRAYFKLSGKEVVVDEEAHVQEMAKDCKGDGVTVTGLMNQASKHERWINAIAPKGTVSFQHQSWFQSLKLPD", "length": 378 }, "evidence": [ { "id": "F1SB76", "url": "https://omabrowser.org/oma/group/F1SB76/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N0U4-1", "protein_name": "Protein FAM185A", "gene_name": "FAM185A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/F1SBB9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "F1SBB9", "url": "https://omabrowser.org/oma/group/F1SBB9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "F1SBB9", "url": "https://www.uniprot.org/uniprotkb/F1SBB9" } ], "pmid": "" }, { "name": "DNA-directed RNA polymerase activity", "id": "GO:0003899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003899", "evidence": [ { "database": "UniProtKB", "id": "F1SBB9", "url": "https://www.uniprot.org/uniprotkb/F1SBB9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "transcription by RNA polymerase II", "id": "GO:0006366", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006366", "evidence": [ { "database": "UniProtKB", "id": "F1SBB9", "url": "https://www.uniprot.org/uniprotkb/F1SBB9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "RNA polymerase II, core complex", "id": "GO:0005665", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005665", "evidence": [ { "database": "UniProtKB", "id": "F1SBB9", "url": "https://www.uniprot.org/uniprotkb/F1SBB9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SBB9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 140, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SBB9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SBB9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBB9" }, { "id": "PF13656", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13656" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DNA-directed RNA polymerase RBP11-like dimerisation", "eco_id": "ECO_0000259", "start_pos": 30, "end_pos": 102, "start_aa": "Cys", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], 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"tr|F1SBD9-1|F1SBD9_PIG Isoform 1 of RIPOR family member 3 OS=Sus scrofa OX=9823 GN=RIPOR3 PE=3 SV=4 CANONICAL=F1SBD9-1" }, "isoforms": [ { "isoform_ac": "F1SBD9-1", "url": "https://www.uniprot.org/uniprotkb/F1SBD9/entry#F1SBD9-1", "sequence": { "sequence": 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"tr|F1SBD9-1|F1SBD9_PIG Isoform 1 of RIPOR family member 3 OS=Sus scrofa OX=9823 GN=RIPOR3 PE=3 SV=4 CANONICAL=F1SBD9-1" }, "locus": { "chromosome": "17", "start_pos": 52162238, "end_pos": 52089052, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008175.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008175.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007958.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007958.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 353, "start_aa": "Thr", "end_pos": 353, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr353", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBD9", "url": "https://www.uniprot.org/uniprotkb/F1SBD9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": 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"IPR036527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10094", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10094", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10094:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10094:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02036", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02036", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SBH0", "url": "https://www.uniprot.org/uniprotkb/F1SBH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBH0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTRLSHYPMSHFSICLANKTAAHTHQPYFPPGLAFDVTICPCGYQSAHGCSQTSGQGPEDQHSSMWKRIDHQLKIKAGDGPQAGQFKELGPAREPTVPHRLGLSEFQSFPVFEDISHHIKEMGAQLVKKVNAVFQLDITKDGKTILQWTIDLKNGSGDTYPGPARLPADTVFTIPEPVFMELVLGKMNPQKAFLAGKFKVSGKVLLGQKLERVFKDWAK", "length": 219, "header": "tr|F1SBH0-1|F1SBH0_PIG Isoform 1 of SCP2 sterol binding domain containing 1 OS=Sus scrofa OX=9823 GN=SCP2D1 PE=4 SV=2 CANONICAL=F1SBH0-1" }, "isoforms": [ { "isoform_ac": "F1SBH0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH0/entry#F1SBH0-1", "sequence": { "sequence": "MTRLSHYPMSHFSICLANKTAAHTHQPYFPPGLAFDVTICPCGYQSAHGCSQTSGQGPEDQHSSMWKRIDHQLKIKAGDGPQAGQFKELGPAREPTVPHRLGLSEFQSFPVFEDISHHIKEMGAQLVKKVNAVFQLDITKDGKTILQWTIDLKNGSGDTYPGPARLPADTVFTIPEPVFMELVLGKMNPQKAFLAGKFKVSGKVLLGQKLERVFKDWAK", "length": 219, "header": "tr|F1SBH0-1|F1SBH0_PIG Isoform 1 of SCP2 sterol binding domain containing 1 OS=Sus scrofa OX=9823 GN=SCP2D1 PE=4 SV=2 CANONICAL=F1SBH0-1" }, "locus": { "chromosome": "17", "start_pos": 26984618, "end_pos": 26983962, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007771.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007771.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007562.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007562.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBH0", "url": "https://www.uniprot.org/uniprotkb/F1SBH0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SBH0", "url": "https://www.uniprot.org/uniprotkb/F1SBH0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 154, "end_pos": 156, "annotation": "n_glycosylation_sequon" }, { "start_pos": 18, "end_pos": 20, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SBH0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 219, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SBH0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SBH0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBH0" }, { "id": "PF02036", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02036" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SCP2", "eco_id": "ECO_0000259", "start_pos": 116, "end_pos": 215, "start_aa": "Ser", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 154, "end_pos": 156 }, { "start_pos": 18, "end_pos": 20 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBH5-1", "uniprot_ac": "F1SBH5", "uniprot_id": "F1SBH5_PIG", "mass": { "chemical_mass": 76108.0, "monoisotopic_mass": 76108.0 }, "refseq": { "ac": "XP_020933844", "name": "double zinc ribbon and ankyrin repeat-containing protein 1 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933844" }, "gene_names": [ { "name": "DZANK1", "type": "recommended", "evidence": [ { "id": "F1SBH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBH5" } ] }, { "name": "DZANK1", "type": "synonym", "evidence": [ { "id": "XP_020933844", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933844" } ] } ], "protein_names": [ { "name": "Double zinc ribbon and ankyrin repeat domains 1", "type": "synonym", "evidence": [ { "id": "F1SBH5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#names_and_taxonomy" } ] }, { "name": "double zinc ribbon and ankyrin repeat-containing protein 1 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020933844", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933844" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBH5", "url": "https://www.uniprot.org/uniprotkb/F1SBH5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DZANK1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5", "locus": { "chromosome": "17", "start_pos": 26651161, "end_pos": 26719492, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007094", "url": "https://www.ensembl.org/id/ENSSSCG00000007094" } ] } } ], "crossref": [ { "id": "F1SBH5", "url": "https://alphafold.ebi.ac.uk/entry/F1SBH5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007094", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007094", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511052", "url": "https://www.ncbi.nlm.nih.gov/gene/100511052", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025874", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025874", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026876", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026876", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052481", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052481", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GFAHIRS", "url": "https://omabrowser.org/oma/group/GFAHIRS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16058", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16058", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16058:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16058:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12773", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12773", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13287", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13287", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020933844", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933844", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZZJ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZZJ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A6L7", "url": "https://www.uniprot.org/uniprotkb/A0A287A6L7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A6L7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A6L7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B200", "url": "https://www.uniprot.org/uniprotkb/A0A287B200", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B200-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B200-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2E2", "url": "https://www.uniprot.org/uniprotkb/A0A287B2E2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B2E2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B2E2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BKU1", "url": "https://www.uniprot.org/uniprotkb/A0A287BKU1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BKU1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BKU1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFC1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFC1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFC1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFC1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBH5", "url": "https://www.uniprot.org/uniprotkb/F1SBH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBH5-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LU91", "url": "https://www.uniprot.org/uniprotkb/I3LU91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LU91-1", "url": "https://www.uniprot.org/uniprotkb/I3LU91-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQMGLCVECENLVPMNAPICVVCEAPLAPQLQPQASLRLKDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPGTPTCYSVCSKCGASNHPSAQFCGSCGIYVKSLARPSMENSLAPAAGEPGLFAEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGPCNASVQKKNARGQTAYDLALEAADEPVTSLFAAQLGLDDREP", "length": 696, "header": "tr|F1SBH5-1|F1SBH5_PIG Isoform 1 of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=3 CANONICAL=F1SBH5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZZJ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#A0A286ZZJ4-1", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQMGLCVECENLVPMNAPICVVCEAPLAPQLQPQASLRLKDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGP", "length": 599, "header": "tr|A0A286ZZJ4-1|A0A286ZZJ4_PIG Computationally mapped isoform of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=2 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26717506, "end_pos": 26660418, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058768.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058768.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037126.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037126.2" } ] } }, { "isoform_ac": "A0A287A6L7-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#A0A287A6L7-1", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQMGLCVECENLVPMNAPICVVCEAPLAPQLQPQASLRLKDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPGTPTCYSVCSKCGASNHPSAQFCGSCGIYVKSLARPSMENSLAPAAGEPGLFAEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGPHDSHLPSLPPFPIRSLS", "length": 671, "header": "tr|A0A287A6L7-1|A0A287A6L7_PIG Computationally mapped isoform of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=1 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26717506, "end_pos": 26654065, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060643.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060643.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039621.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039621.1" } ] } }, { "isoform_ac": "A0A287B200-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#A0A287B200-1", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGPCNASVQKKNARGQTAYDLALEAADEPVTSLFAAQLGLDDREP", "length": 572, "header": "tr|A0A287B200-1|A0A287B200_PIG Computationally mapped isoform of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=1 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26717506, "end_pos": 26652031, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049700.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049700.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050461.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050461.1" } ] } }, { "isoform_ac": "A0A287B2E2-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#A0A287B2E2-1", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQMGLCVECENLVPMNAPICVVCEAPLAPQLQPQASLRLKDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPGTPTCYSVCSKCGASNHPSAQFCGSCGIYVKSLARPSMENSLAPAAGEPGLFAEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGP", "length": 654, "header": "tr|A0A287B2E2-1|A0A287B2E2_PIG Computationally mapped isoform of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=3 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26717506, "end_pos": 26660418, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063974.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063974.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050268.3", "url": "https://www.ensembl.org/id/ENSSSCP00000050268.3" } ] } }, { "isoform_ac": "A0A287BKU1-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#A0A287BKU1-1", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQMGLCVECENLVPMNAPICVVCEAPLAPQLQPQASLRLKDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGPLQNTALHEATLLGRAGMECIAALLRCNASVQKKNARGQTAYDLALEAADEPVTSLFAAQLGLDDREP", "length": 666, "header": "tr|A0A287BKU1-1|A0A287BKU1_PIG Computationally mapped isoform of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=2 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26717506, "end_pos": 26652031, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059786.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059786.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056692.2", "url": "https://www.ensembl.org/id/ENSSSCP00000056692.2" } ] } }, { "isoform_ac": "A0A5G2RFC1-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#A0A5G2RFC1-1", "sequence": { "sequence": "MPIMQSDDRRGGKMTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGP", "length": 574, "header": "tr|A0A5G2RFC1-1|A0A5G2RFC1_PIG Computationally mapped isoform of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=2 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26719323, "end_pos": 26660418, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085830.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085830.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073477.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073477.2" } ] } }, { "isoform_ac": "F1SBH5-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#F1SBH5-1", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQMGLCVECENLVPMNAPICVVCEAPLAPQLQPQASLRLKDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPGTPTCYSVCSKCGASNHPSAQFCGSCGIYVKSLARPSMENSLAPAAGEPGLFAEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGPCNASVQKKNARGQTAYDLALEAADEPVTSLFAAQLGLDDREP", "length": 696, "header": "tr|F1SBH5-1|F1SBH5_PIG Isoform 1 of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=3 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26717506, "end_pos": 26652031, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007766.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007766.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007557.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007557.3" } ] } }, { "isoform_ac": "I3LU91-1", "url": "https://www.uniprot.org/uniprotkb/F1SBH5/entry#I3LU91-1", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKKIGYGENNTFKYTKPITLPDGKIQVKAIAVSKDCRQSAVVTKVFQVDFVPPDAASSEDTVENALKDSSKQDLKNGFVEPKVRKKYKNAENKLGWNVNLGKFPDMGERNDPKTLKDLRFSESPRETPAFREESASRPATQQTQFPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLVRRPSDPFARYCLECGSSVPPIFGCRLPPPEGAQMGLCVECENLVPMNAPICVVCEAPLAPQLQPQASLRLKDKVICRTCGTGNPAHLRYCVTCDGPLPSSQEPGTPTCYSVCSKCGASNHPSAQFCGSCGIYVKSLARPSMENSLAPAAGEPGLFAEPRSAWQSLSVTLPRADAGTKKDTGTQTTGLFYPSGTLLAKKELEVASQKQRQEKMSDHKPLLTAVSPGRGYWRKQVDHIAAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKAVNFSDHFLSSVTEGANGLYGSRSSLVSDYSQSSSDGAEKVTRSKNFKTKAFQEKQQLTPENMLLLKEVGPAGEGRASVMEQLLDEGADPNCSDSEDRPVLSTAVMNKHHEAIPVLVQRGADVDQQWGPALTCL", "length": 659, "header": "tr|I3LU91-1|I3LU91_PIG Computationally mapped isoform of Double zinc ribbon and ankyrin repeat domains 1 OS=Sus scrofa OX=9823 GN=DZANK1 PE=1 SV=3 CANONICAL=F1SBH5-1" }, "locus": { "chromosome": "17", "start_pos": 26717506, "end_pos": 26659671, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026567.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026567.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027690.3", "url": "https://www.ensembl.org/id/ENSSSCP00000027690.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBH5", "url": "https://www.uniprot.org/uniprotkb/F1SBH5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7H3G7-1", "protein_name": "Double zinc ribbon and ankyrin repeat-containing protein 1", "gene_name": "Dzank1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTAGSVCAPQIIPLRVPQPGKANHEIDTNTLLEMKSDTPDVNIYYTLDGSKPDFLKKVGSGENNTFKYIKPITLPDGKIQVKAVAVSKDCRQSGIVTKVFQVDYEPPKMVSPEDSVDDALKGFSKQELKNGFVGPKLRKKYKNAENKSTWNVNIRRLADLKVSERADSKTLKDLRFSESPMEIPAYHEGSGSRIAAHPSQSPGFAHITGQRSLTSTEVTRIQRDTDYLKCTHCLASRPSDPFARFCHECGAPVPPLYSYRLPPPEGAQMGVCAECGSMVPMNTPICVVCEAPLAPQLRPQASLHLKEKVICRTCGTGNPVHLRYCVTCEGTLPSTQEQWLCNGNEVPHPPSRNGETISCSRCGCQNHWEASFCDWCGAPLGISGSHSVCPKCGANNHLSARFCGTCGIYVKSITRFRMNSLALAVGGPRPFSEPRSAWQSLSVPLPSSALGSKDMGTQTSGLFYPSGKLLAKKELEAACHRQRQEKMSDHRPVLTAVSPGRGYWRKQLDHISAHLRSYAQNNPDFRALIAEPRMGKLISATVHEDGYEVSIRLNYVQVSNKNLYINKSMNLSDHFLSSVTEGGNGLYDSRSSLVSAYSQSTSDTPEGIKKMKSLKAKNFHRNPELPTPENRLLLEEVGPTGKGRLSVLEQLLDEGADPNCCDSQGRPAVTVAVVNKHHEAIPVLAQRGADIDQQWGPFRNTALHEATLLGLEGRESITTLLGCNANIQKKNARGQTAYDMALEIGDDLTTSLFATKFSQGLEDQLSPSGNPILGDN", "length": 776 }, "evidence": [ { "id": "F1SBH5", "url": "https://omabrowser.org/oma/group/F1SBH5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4A039-1", "protein_name": "Double zinc ribbon and ankyrin repeat-containing protein 1", "gene_name": "Dzank1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTAGSVCAPQIIPLRVPQPGKANHEIDTNTLLEMKSDTPDVNIYYTLDGSKPDFLKKVGSGENNTFKYIKPIALPDGKIQVKAVAVSKDCRQSGIVTKVFQVDYEPPKMVSSEDHGEDALKGFSKQELKNGFVGPKLRKKYKNAENKSTWNVNLRRLADLKVGERADPKTLKDLRFSESPLEIPAYHEGASARLPTHQAQSPGFAHITGQKSLTSTEVMRIQRETDFLKCAHCLASRPSDPFARFCQECGAPVPPIFGYRLPPPEGAQMGLCAECGSMVPMNTPICVVCEAPLAPQLRPQASLYLKERVICRTCGTGNPAHLRYCVTCEGTLPPTQEQWLCNGDEVPRLPTRNGETISCSRCGCQNLWEASFCDWCGAMLGISASHSVCPKCGASNHLTARFCGSCGIYVKSITRFRMNNSLAIVAGGPRPFPEPRSAWQSLNVPLPTPATGSKKDMGTQTSGLFYPSGKLLAKKELEAASHRQRQEKMSDHRPVLTAVSPGRGYWRKQLDHISAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKNLYLNKSMNLSDHFLSSVTEGGNGLYGSRSSLVSAYSQSISDTPESIKKMKNPKAKSFLANPEPLTPENRLLLEEVGSTGKGRLSVLEQLLDEGADPNCCDSQGRPAVIVAVVNKHFEAIPVLAQRGADIDQQWGPFGNTALHEATLLGLEGRESVATLLGCNANTQKKNTRGQTAYDIALEMGDDLTSALFAD", "length": 757 }, "evidence": [ { "id": "F1SBH5", "url": "https://omabrowser.org/oma/group/F1SBH5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q1LXR6-1", "protein_name": "Double zinc ribbon and ankyrin repeat-containing protein 1", "gene_name": "dzank1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTAGSVAAPQIIPIRIPPPGKAKHEIDSSTPVEIKSESPDVRVLYTLDGSKPELTKRPGFADSTLKYTEPVRLPVGKVYVKAMAISIDGRQSAVVTKVFVVEPSASDERELNAHDEDDSVKNDTAIDGKDVVENGTGVSSVKYLDISSNEAHRALKGPRFLSQRLGPGSSARLTAQNSQNQSADVVESPLKNLTNTQISRIQRETDFLRCPKCLSHRPSDPFARFCLHCGAPVPPIPGQRLPPTEGGQMGLCMHCKTMVPLNTAICVVCESPLDQQLQPQATLRLQDKFICHSCGTGNPAHITHCVTCESQLLRQARPVLSGQRAAPVPSSQGKMVSCSKCNRVNHSDARFCDWCGAKPGHKASSVKCSQCGASSHPYANHCGGCGVFLDGPPRMPLQVNQRQDAEEMQQTASAAELATAPPSVGLRMCADAQTQTVGLFFPSNTELKKRSQQREAELSRQEQMRDRKPLLTAISPGRGFWRKQLDHICAHLRSYTQNNTEFRALIGEPRLGRMISAVIQEDSYEVSLRINFISAPPEESRSSSAGQRSRSVTSESQNLSSVTEGRNSASPENNINTTGSEVKKKKKKKIGTSDVTENQPESKDSLLLKEVGPEGRGRIPAVQQLLDEGADPACLGKDGRPALVAAVLNGHHDVIPVLVQREADVNQASGPLKNTALHEAAALGDEGLKSVEILLGCNASIRKQNDRGQTPYDIAVAAGSSSVLSLMAAHLGQGLLLRHTKARSLSGLDTFS", "length": 752 }, "evidence": [ { "id": "F1SBH5", "url": "https://omabrowser.org/oma/group/F1SBH5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8C008-1", "protein_name": "Double zinc ribbon and ankyrin repeat-containing protein 1", "gene_name": "Dzank1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTAGSVCAPQIIPLRVPQPGKANHEIDTNTLLEMKSDTPDVNIYYTLDGSKPDFLKKVGSGENNTFKYVKPITLPDGKIQVKAVAVSKDCRQSGIVTKVFQVDYEPPKMVSSEDNVEDALKGFSKQELKNGFVGPKLRKKYKNAENKSTWNVNLRRLADLKVGERADPKTLKDLRFAESPLEIPAYHEGASARLPTHQAQSPGFAHITGQKSLTSTEIMRIQRETDFLKCAHCLASRPSDPFARFCHECGAPVPPIFGYRLPPPEGAQMGLCAECGSMVPMNTPICVVCEAPLAPQLRPQASLYLKERVICRTCGTGNPAHLRYCVTCEGPLPPTQEQWLCNGDEVPHPPARNGETISCSRCGCQNLWEASFCDWCGAMLGISASHSVCPKCGASNHLTARFCGSCGIYVKSITRFRMHNSLAIVAGAPRPFPEPRSAWQSLNVPLPTSASGSKKDTGTQTSGLFYPSGKLLAKKELEAASHRQRQEKMSDHRPVLTAVSPGRGYWRKQLDHISAHLRSYAQNNPEFRALIAEPRMGKLISATVHEDGYEVSIRLNYIQVSNKSLYFNKSVNLSDHFLSSVTEGGNGLYDSRSSLVSAYSQSVSDTPESIKKMKNLKAKSFLVNPEPLTPENKLLLEEVGSSGKGRLSVLEQLLDEGADPNCCDSQGRPAVIVAVVNKHYEAIPVLAQRGADIDQQWGPFRNTALHEATLLGLEGRESIATLLGCNANAQKKNTRGQTAYDIALEMGDDLTSSLFAAKFTQGLEDQLSPPGNRILGDS", "length": 778 }, "evidence": [ { "id": "F1SBH5", "url": "https://omabrowser.org/oma/group/F1SBH5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NVP4-1", "protein_name": "Double zinc ribbon and ankyrin repeat-containing protein 1", "gene_name": "DZANK1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTAGSVCVPQIIPLRVPQPGKANHEIDNNTLLEMKSDTPDVNIYYTLDGSKPEFLKRIGYGENNTFKYIKPITLPDGKIQVKAIAVSKDCRQSGIVTKVFHVDYEPPNIVSPEDNVENVLKDSSRQEFKNGFVGSKLKKKYKNSENQRSWNVNLRKFPESPLEIPAYGGGSGSRPPTRQSQSPGFAHVSGQKCLTSTEIMRIQRETDFLKCAHCLAPRPSDPFARFCQECGSPVPPIFGCRLPPPEGAQMGLCAECRSLVPMNTPICVVCEAPLALQLQPQASLHLKEKVICRACGTGNPAHLRYCVTCEGALPSSQESMCSGDKAPPPPTQKGGTISCYRCGRWNLWEASFCGWCGAMLGIPAGCSVCPKCGASNHLSARFCGSCGICVKSLVKLSLDRSLALAAEEPRPFSESLNIPLPRSDVGTKRDIGTQTVGLFYPSGKLLAKKEQELASQKQRQEKMSDHKPLLTAISPGRGYWRRQLDHISAHLRCYAQNNPEFRALIAEPRMGKLISATVHEDGCEVSIRLNYSQVSNKNLYLNKAVNFSDHLLSSAAEGDGGLCGSRSSWVSDYSQSTSDTIEKIKRIKNFKTKTFQEKKEQLIPENRLLLKEVGPTGEGRVSVIEQLLDEGADPNCCDEDNRPVITVAVMNKHHEAIPVLVQRGADIDQQWGPLRNTALHEATLLGLAGRESTATLLGCNASIQKKNAGGQTAYDLALNTGDDLVTSLFAAKFGQGLEDQLAQTRSLSLDDC", "length": 752 }, "evidence": [ { "id": "F1SBH5", "url": "https://omabrowser.org/oma/group/F1SBH5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", 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} } ], "crossref": [ { "id": "F1SBJ2", "url": "https://alphafold.ebi.ac.uk/entry/F1SBJ2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007077", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007077", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100155396", "url": "https://www.ncbi.nlm.nih.gov/gene/100155396", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR012580", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012580", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039754", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039754", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056750", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056750", "database": "InterPro", "categories": [ "Protein 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"MASKQEIMNDQRFRRVTKDPRFWEMPEKERKVKIDKRFRAMFHDKKFKLNYAVDKRGRPINHSTTEDLKRFYELSDSDSDLSDENNKVLSQKKIKKKKNQTKSEVETKNFVEKKKETKKINQKDFGNKNDLDNSERIQEKKTPCKSNKMDSISPKKNSKKFTQKSTKGEKNIVQHSTDSFTKGKLRTVGSGTAEIVPSPKVKYSKTKREMQSVVPCIMARDSDGPENSTDGEVFDQDALEEDSESASEIGDEESEDESTGIDGADVDGDDDDDDGNENEEEEDEDEDSEDEDEGSEEEDESDSGPDLARGKGNIETSSEDEEDMADLLPEESGFEHAWRELDKDAPRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKQRMQEEQVQGPVELLSIPEDAPEKDWTSREKLRDYQFKRLKYYYAVVDCDSPETAAKIYEDCDGLEFESSCSFIDLRFIPDDITFDDEPKDVASEVDLTAYKPKYFTSAAMGTSTVEITWDETDHERITTLNRKFKKEELLDMDFQAYLASSSEDEEEIEEELQGDDEVNVEEDGKTKRTQKDDEEQIAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKLTPWEQFLEKKKEKKRLKKKQKALAAEASEDEVPSDIDLNDPYFAEEAKKIGIKEKKKSMKSAKDGTSPEEEAEIERQKAEMALLVMDEEEESKKHFNYNKIVEHQNLSKKKKKQLMKKKELLEDDFEVNVKDTRFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARQREQKEQELTQATKKKESEIQKESQKKSIDPALSMLIKSVKNKTEQFQARKKQKVK", "length": 858, "header": "tr|F1SBJ2-1|F1SBJ2_PIG Isoform 1 of ESF1 nucleolar pre-rRNA processing protein homolog OS=Sus scrofa OX=9823 GN=ESF1 PE=3 SV=2 CANONICAL=F1SBJ2-1" }, "isoforms": [ { "isoform_ac": "F1SBJ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SBJ2/entry#F1SBJ2-1", "sequence": { "sequence": "MASKQEIMNDQRFRRVTKDPRFWEMPEKERKVKIDKRFRAMFHDKKFKLNYAVDKRGRPINHSTTEDLKRFYELSDSDSDLSDENNKVLSQKKIKKKKNQTKSEVETKNFVEKKKETKKINQKDFGNKNDLDNSERIQEKKTPCKSNKMDSISPKKNSKKFTQKSTKGEKNIVQHSTDSFTKGKLRTVGSGTAEIVPSPKVKYSKTKREMQSVVPCIMARDSDGPENSTDGEVFDQDALEEDSESASEIGDEESEDESTGIDGADVDGDDDDDDGNENEEEEDEDEDSEDEDEGSEEEDESDSGPDLARGKGNIETSSEDEEDMADLLPEESGFEHAWRELDKDAPRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKQRMQEEQVQGPVELLSIPEDAPEKDWTSREKLRDYQFKRLKYYYAVVDCDSPETAAKIYEDCDGLEFESSCSFIDLRFIPDDITFDDEPKDVASEVDLTAYKPKYFTSAAMGTSTVEITWDETDHERITTLNRKFKKEELLDMDFQAYLASSSEDEEEIEEELQGDDEVNVEEDGKTKRTQKDDEEQIAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKLTPWEQFLEKKKEKKRLKKKQKALAAEASEDEVPSDIDLNDPYFAEEAKKIGIKEKKKSMKSAKDGTSPEEEAEIERQKAEMALLVMDEEEESKKHFNYNKIVEHQNLSKKKKKQLMKKKELLEDDFEVNVKDTRFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARQREQKEQELTQATKKKESEIQKESQKKSIDPALSMLIKSVKNKTEQFQARKKQKVK", "length": 858, "header": "tr|F1SBJ2-1|F1SBJ2_PIG Isoform 1 of ESF1 nucleolar pre-rRNA processing protein homolog OS=Sus scrofa OX=9823 GN=ESF1 PE=3 SV=2 CANONICAL=F1SBJ2-1" }, "locus": { "chromosome": "17", "start_pos": 22479055, "end_pos": 22419417, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007748.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007748.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007539.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007539.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ2", "url": "https://www.uniprot.org/uniprotkb/F1SBJ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155396", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155396", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q55EB8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTKQNGGNKPNNGAITDNRFKHAQNDPKFKMYRRKDKAVQLDNRFGDLMKSNSSFTSDAPIDEYGRKIVNKKIDKSIKKTYVLENEEKEEKEEKEKKPKSTTKKEIKKPVVESESESESEVEEEESINSDIESEKVIEYGGFEYNSDTESSDAEEFQGDDIEEEEEEEEEVPRGDATKRFAVLNCDWDNITSKQLFILLNSFVPSSGGGHIERITIYPSDFGLEQMAREKSLGPNKEIWDSSKAIINNSNNNGLKESSLSFDKLEDAESLDGKGFNLEKLRQYELSKLRYYYAVVECSSIQTANKIYEECEGMEIEDTANVLDLRFIPDDQKFTNTPRDTCTELPASTDENGGFGFQTSILKGTAVDFTWDIDKTRKKLLTKNFSKFDAREEDLRAYLADPTSSEESSEESSDDGDNNNNNNKNGKQTTKNSKRLALRNKYKSLLLDGIEDEEEKDDIQITFNSAFSDTLKQQKQQKSNESDDDDDDDDGLSIKFSDQEIGSSDEEDEESDKEGIINKENDDDESDSAADDESSENESGDDDDDDDDDDNLLNGSDSETPDWAKDLKSDSEDDTVQEMVINTNLNNVGKKLLKEKEKRENGNVFTDYLEKKKEKKSQKKRERRIEIEKLIKEKEEKEKQQKKNKSKGRVTEEEKKEKAELELLLMDDDLSKNKGYTKKQLEREAKMNTIDPIERKKLEKKLKKKNQKMDVQDDKHLIDLQGFKMNTTDNRFHSMFIDPAYAIDPTDPKFKRTTGMVEMLTEKKNRRKVEKEKEEKEILERRNKLKDQNLNSTTTNSTTTTTTSKSSLSEMAQNIKRKAEEQKNKENSKKFKK", "length": 836 }, "evidence": [ { "id": "F1SBJ2", "url": "https://omabrowser.org/oma/group/F1SBJ2/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9MAC6-1", "protein_name": "Pre-rRNA-processing ESF1-like protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGSKNKKQRKGESIEEAKGSSGVAEEGNEMIKDPRFSSAHTDPKFRRMRRRDSKVAIDSRFQPMFNDKRFATGSAPVDKRGKRRTGGTGKDSLREFYRIEDEGKQKTEEESGDESGSETEINDLKSEKSSHVESEEESESELKVASLDDESDEKADSEELSSQEEEEEEDDTDEDDEAMYEDEGPEIPEENIPLIQEETHRLAIVNMDWRHVSAKDLYVVLNSFLPKDGRILSVAVYPSEFGLERMKEEEIHGPVIDGDKKNDASDDEDEEEEEDEDVINQKLRAYEISRLKYYFAVAECDSSATADYLYKSCDGIEFERSSNKLDLRFIPDSMEFKHPPRDIASEAPAGYEGLDFQSRALQMSKVNLSWDEDEPHRIKTLNQKFNPEQLANLEMKEFLASDESDSDEEDDLGNEVINQSKKKDKKKDKYRALIEAEDVDSDKDLEEENDQDMEVTFNTGLEDLSKEILKKKDNQSESVWETYLRQRREKKRARKNKQKDDDSSPDDDDDYNIDRKAVKDDGDDDFFMEEPPLKKKKKEGKTKKEEVAAEEKSRAELELLLADENAGDGNGLKGYNIKRKAKKGKTDISEDKIPAAELDDPRFSALFSSPYYALDPTDPQFKRSATYARQLALKQKEDPKGHEDVKAPKEKQELNSDGNLGSKKERHELTSTVKSLKMKMMNKDSEKKKAGNPASSSTLAQRIKKKAKDLSKK", "length": 713 }, "evidence": [ { "id": "F1SBJ2", "url": "https://omabrowser.org/oma/group/F1SBJ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ2", "url": "https://www.uniprot.org/uniprotkb/F1SBJ2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ2", "url": "https://www.uniprot.org/uniprotkb/F1SBJ2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "F1SBJ2", "url": "https://www.uniprot.org/uniprotkb/F1SBJ2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 227, "end_pos": 229, "annotation": "n_glycosylation_sequon" }, { "start_pos": 61, "end_pos": 63, "annotation": "n_glycosylation_sequon" }, { "start_pos": 740, "end_pos": 742, "annotation": "n_glycosylation_sequon" }, { "start_pos": 844, "end_pos": 846, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SBJ2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 858, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SBJ2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SBJ2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBJ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBJ2" }, { "id": "PF25121", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25121" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ESF1 RRM", "eco_id": "ECO_0000259", "start_pos": 352, "end_pos": 489, "start_aa": "Thr", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SBJ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBJ2" }, { "id": "PF08159", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08159" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NUC153", "eco_id": "ECO_0000259", "start_pos": 766, "end_pos": 794, "start_aa": "Asp", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBK5-1", "uniprot_ac": "F1SBK5", "uniprot_id": "F1SBK5_PIG", "mass": { "chemical_mass": 86902.0, "monoisotopic_mass": 86902.0 }, "refseq": { "ac": "XP_005672754", "name": "ankyrin repeat and EF-hand domain-containing protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672754" }, "gene_names": [ { "name": "ANKEF1", "type": "recommended", "evidence": [ { "id": "F1SBK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBK5" } ] }, { "name": "ANKEF1", "type": "synonym", "evidence": [ { "id": "XP_005672754", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672754" } ] } ], "protein_names": [ { "name": "Ankyrin repeat and EF-hand domain containing 1", "type": "synonym", "evidence": [ { "id": "F1SBK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBK5/entry#names_and_taxonomy" } ] }, { "name": "ankyrin repeat and EF-hand domain-containing protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005672754", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672754" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBK5", "url": "https://www.uniprot.org/uniprotkb/F1SBK5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ANKEF1", "url": "https://www.uniprot.org/uniprotkb/F1SBK5", "locus": { "chromosome": "17", "start_pos": 18980560, "end_pos": 18958165, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007063", "url": "https://www.ensembl.org/id/ENSSSCG00000007063" } ] } } ], "crossref": [ { "id": "F1SBK5", "url": "https://alphafold.ebi.ac.uk/entry/F1SBK5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007063", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007063", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100517504", "url": "https://www.ncbi.nlm.nih.gov/gene/100517504", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "F1SBK5", "url": "https://www.ebi.ac.uk/intact/interactors/id:F1SBK5*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052801", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052801", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517504", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517504", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ATDNFMW", "url": "https://omabrowser.org/oma/group/ATDNFMW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SBK5", "url": "https://www.orthodb.org/?gene=F1SBK5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24127", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24127", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24127:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24127:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005672754", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672754", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SBK5", "url": "https://www.uniprot.org/uniprotkb/F1SBK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBK5-1", "url": "https://www.uniprot.org/uniprotkb/F1SBK5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALADKRLENLQIYKVLQCVRNKDKKQIEKLTRLGYPELINFTDPINGHSALHLASVSNDIDMVSFLLNLGAHPDVQDGMGCTPAMRAAELGHELSMEILAKAKADMTIVDNEGKGILFYCILPTKRHYRCTLIALEHGADVNNCTYEGKPIFLRACEEAHDVKDVCLTLLEKGANPNAINTSTGRTALMEASREGVIELVRGILERGGEVNAFDKDRHHAAHFAAKGGFFDILKLLFAYDGDMGLIAMNGNTPLHYAAMGGFADCCKYIAQRGCDLKWKNLDHKTPRALAKEGGFRAASKEIQQAERIANKLARPGAKNPNPQLYLRLHDWSVEHETFLREAFSFVDRGDGTVTKEDFVLALEERQDFVDSEQLAVIAQLHEKVRGGGVNINDFFKGTKYLSKSYVLGSFGLKRKKKGMAKRAKKGKLVLPLPICIIPDHVFPRRSDGGLPYYMIETYQNVTDCNRFNRDHPPEHPIQDDSAWYIDDPGKAFSNINFITKAGDLASLKKAFESGIPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVNATDNFLWTPLHFACHAGQQDIAELLVKSGAVVDALSINNSTPLSRAIESCSLDTVKYLLDIGAKFQLENRKGHSAMDVAKAYADYRVIGLIKEKMDNLPKPAENQKPKGKPSLKVKTEGPEIKKEEERLSSIYTIPTVVQEKKMHKDNVVYLNSLITSGYTKKVDITFIPRRIWSPEATTAELIRKRELRREKFTYEVDFDEFMMPFQKNITEKAQALEAAFRT", "length": 776, "header": "tr|F1SBK5-1|F1SBK5_PIG Isoform 1 of Ankyrin repeat and EF-hand domain containing 1 OS=Sus scrofa OX=9823 GN=ANKEF1 PE=4 SV=1 CANONICAL=F1SBK5-1" }, "isoforms": [ { "isoform_ac": "F1SBK5-1", "url": "https://www.uniprot.org/uniprotkb/F1SBK5/entry#F1SBK5-1", "sequence": { "sequence": "MALADKRLENLQIYKVLQCVRNKDKKQIEKLTRLGYPELINFTDPINGHSALHLASVSNDIDMVSFLLNLGAHPDVQDGMGCTPAMRAAELGHELSMEILAKAKADMTIVDNEGKGILFYCILPTKRHYRCTLIALEHGADVNNCTYEGKPIFLRACEEAHDVKDVCLTLLEKGANPNAINTSTGRTALMEASREGVIELVRGILERGGEVNAFDKDRHHAAHFAAKGGFFDILKLLFAYDGDMGLIAMNGNTPLHYAAMGGFADCCKYIAQRGCDLKWKNLDHKTPRALAKEGGFRAASKEIQQAERIANKLARPGAKNPNPQLYLRLHDWSVEHETFLREAFSFVDRGDGTVTKEDFVLALEERQDFVDSEQLAVIAQLHEKVRGGGVNINDFFKGTKYLSKSYVLGSFGLKRKKKGMAKRAKKGKLVLPLPICIIPDHVFPRRSDGGLPYYMIETYQNVTDCNRFNRDHPPEHPIQDDSAWYIDDPGKAFSNINFITKAGDLASLKKAFESGIPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVNATDNFLWTPLHFACHAGQQDIAELLVKSGAVVDALSINNSTPLSRAIESCSLDTVKYLLDIGAKFQLENRKGHSAMDVAKAYADYRVIGLIKEKMDNLPKPAENQKPKGKPSLKVKTEGPEIKKEEERLSSIYTIPTVVQEKKMHKDNVVYLNSLITSGYTKKVDITFIPRRIWSPEATTAELIRKRELRREKFTYEVDFDEFMMPFQKNITEKAQALEAAFRT", "length": 776, "header": "tr|F1SBK5-1|F1SBK5_PIG Isoform 1 of Ankyrin repeat and EF-hand domain containing 1 OS=Sus scrofa OX=9823 GN=ANKEF1 PE=4 SV=1 CANONICAL=F1SBK5-1" }, "locus": { "chromosome": "17", "start_pos": 18979433, "end_pos": 18959903, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007734.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007734.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007526.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007526.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBK5", "url": "https://www.uniprot.org/uniprotkb/F1SBK5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517504", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517504", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A061I1F9-1", "protein_name": "Ankyrin repeat and EF-hand domain-containing protein 1", "gene_name": "Ankef1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALADKRLENLQIYRVLQCVRNKDKKQIEKLTRLGYPELINFTEPIDGLSALHLASISNDIDMVSFLLGLGAHPDVQDRMGCTPTMRAAELGHELSMEILAKAKADMTIVDNEGKGILFYCILPTKRHYRCSLIALDHGADVNNITYEGKPVFLKACEEAHDVKEMCMTFLEKGANPNAINSSTGRTALMEASREGAVELVRGILERGGEVNAFDNDRHHAAHFAAKGGFFDILKLLFAYSGDMGLIGMNGNTPLHYAAMGGFADCCKYLAQRGCELKWKNLEHKTPRAVAKDGGFKAASKEIRRAERTAAKLAKPGVKNPNPIWALRLHDWSIEHEAFLREAFTFVDRGDGSVSKDDFVVTLEERQDFATPDQLLQIAQMHEKSRGSGININDFFKGTKYLSKSFVLGSFGPKKKKKSLSRKPKKGKFFLPLPVCTIPENAFPRRPDGGPPYYMIETYQNVSDCSRFNRDHPPDHPIQDDSVWYMDEPGKVFANINFITMAGDLSSLKKAFEAGIPVDMKDSSYKTPLMTACASGNLDVVKFLLEKGANVNATDNFLWTPLHFACHAGQQDIVELLIKSGAAVDAMSINNSTPLSRAIESCRLDTVKYLLDIGAKFQIENRRGHAAMDVAKAYADYRIIDMIKEKIDSLPKPLDNQKMKPKLPKLKSEGTDIKKEEETLSSVYAVPPITEEKKLSKDNVVYLNSLITSGYTKKVDITFIPRRIWSPEATTAELIRKRELRRERFTYEVDFEDFMMPFQKNIMEKAQALEASLKL", "length": 775 }, "evidence": [ { "id": "F1SBK5", "url": "https://omabrowser.org/oma/group/F1SBK5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0Z5B9-1", "protein_name": "Ankyrin repeat and EF-hand domain containing 1", "gene_name": "ANKEF1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPVDNRLRNLQIYKLLQCVHQKDKKQIEKLIQNGFPNLINFTEPMDGHSALSLACIKNDIDMCSFLLERGAHPDVQDKMGCTPAMKAAELGHSLVLELLAKIKADMTIVDNEGKGVLFYCILPTRRHYHCTQIALDYGADINNCSTDGKPVFLQACEQAHDIKEICLNFLERGANPNARDPVTGRTAIMEAAREGALEVVRGILERGGDINLFDNERHNAAHFAAKGGFFEILRIISAYNGDLGLIAMNGNTPLHYAAEGGFANCCKFIGQRGCDPTWTNLLAKTPRAVAKEGGFKAAATELHKIEKNFIKQSKPGAKENNPLWALRLYDWSLEHQTALLQAFEAVDQGDGTVAKDDFISVIQKWCSFVDAEQIQTIAEAHEKPDSEGINTEEFFKGFKYLQKSCLITSFGPKRKKGKKGKKRRSKKSVAVPVPICVIPKSACLLREDGFPVYMIEAVQSTADSYHINQDHPSAHPVHDDRAWYTDEPRKMYMNINFLVRAGDILSLQKAFEEGVPVDIKDKYYKTPLMAACTSGNIDVVRYLLEKGADVNATDNFMWTPLHHACYNGHLDIAELMVKAGGAIDAPAIGNATPLMRAVEICRLDIVHFLIDAGADVQTTNSNGKNALDIAKVFADSRIIDLLQNKLDNLPKVTEKKGAEKGTVAKPKMPSAPTPSEVQAVKTEPSHASLPPLEKPRLEKPAQDSVVYLNSLISSGATKKDDIAFKPRKIWTPDAATKELVRKQELLWERSTLGGDSENFESPFKRKVTE", "length": 770 }, "evidence": [ { "id": "F1SBK5", "url": "https://omabrowser.org/oma/group/F1SBK5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A9E7-1", "protein_name": "Ankyrin repeat and EF-hand domain containing 1", "gene_name": "Ankef1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALADKRLENLQIYRVLQCVRNKDKKQIEKLTKLGYPELINFTEPIDGLSALHLASVSNDIDMVSFLLGLGAHPDVQDHMGCTPTMRAAELGHELSMEILAKAKADMTIVDNEGKGVLFYCILPTKRHFRCSQIALEHGADVNNITYEGKPVFLRACEEAHDVKDMCLTFLEKGANPNAINTSTGRTALMESSREGVLELVRGILERGGEVNTFDNDRHNAAHFAAKGGFFDILKLLFAYSGEMGLIGMDGNTPLHFAAMGGFADCCKYIAQRGCDLKWKNLEHKTPRMVAKDGGFKAASKEIRRAERTAAKLAKPGVKNPNPLWALRLHDWSIEHESSLREAFSFVDRGDGVVSKDDFVLALEERQEFATPEQLLSVAQMHEKSRGGGVNINDFFKGTKYLSKSFVLGSFGPKKKKKGLGKKPRKGKFVLPLPICTIPENAFPRRPDGGPPYYMVETYQNVTDTNRFNRDHPPEHPIQDDSEWYIDDPNRVFANINFITKAGDLASLKKAFEAGIPVDMKDNTYKTPLMTACASGNIDVVKFLLERGANVNATDNFLWTPLHFACHAGQQDIVELLVQSGAVIDASSINNSTPLSRAIESCRLDTVKYLLDNGAKFQTENRKGHAAMDIAKAYADYRIIDMIKEKLDELPKPTDNQKMKSKLPKLKTEGTDVKKEEGTLSSIYTVPAITEEKKIHRDNVVYLNSLITSGFTKKVDITFIPKRIWSPEATTAQLIRKRELRRERFTYEVDFEDFMMPFQKNITEKAQALESMLKN", "length": 775 }, "evidence": [ { "id": "F1SBK5", "url": "https://omabrowser.org/oma/group/F1SBK5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1B993-1", "protein_name": "Ankyrin repeat and EF-hand domain containing 1", "gene_name": "ANKEF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MALADKRLENLQIYKVLQCVRNKDKKQIEKLTRLGYPELINFTDPVNGNSALHLASVSNDIDMVSFLLSLGAHPDVQDKMGCTPTMRAAELGHELSMEILAKAKADMTVVDNEGKGILFYCILPTKRHYRCALIALEHGADVNNCTCEGKPIFLRACEEAHDVKDVCLTFLEKGANPNAINTSTGRTALMEASREGVTELVRGILERGGDVNAFDNDRHHAAHFAAKGGFFDILKLLFAYNGDMGLIAMNGNTPLHYAAMGGFADCCKYIAQRGCDLKWKNLEHKTPRNLAKEGGFKAASKEIRRAEQIANKLARPGVKNPNPHLFLRLHDWSVEHETFLREAFSFVDRGDGTVTKEDFVLTLEERQDFVNSEQLAAIAQLHEKVRGGGVNINEFFKGTRYLSKSYVLGSYGPKKKKKGMAKRARVGKFVFPLPICIIPDHVFPRRSDGGPPYYMIETYKNVTDCNRFNRDHPPEHPIQDDSAWYIDDPGKVFSNINFITKAGDLASLKKAFESGIPVDMKDNYYKTPLMTACATGNIDAVKFLLEKGANVNATDNFLWTPLHFACHAGQQDIVELLVKSGAVVDALSINNSTPLSRAIESCRLDTVKYLLDIGAKFQLENRKGHSAMDVAKAYADSRIIGLIKEKLDNLPKPAENQKPKGKPQPKAKTEGPEIKKEEETLSAIYTVPAIVEDKKMRKDNVVYLNSLITSGYTKKVDITFIPQRIWSPEATTAELIRMRELRRERLTYEVDFDDFMMPFQKHITERAQAVEASFKM", "length": 776 }, "evidence": [ { "id": "F1SBK5", "url": "https://omabrowser.org/oma/group/F1SBK5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9D2J7-1", "protein_name": "Ankyrin repeat and EF-hand domain-containing protein 1", "gene_name": "Ankef1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALADKRLENLQIYRVLQCVRNKDKKQIEKLTRLGYPELINFTEPIDGLSALHLASISNDTDMVSFLLKLGAHPDVQDHMGCTPTMRAAELGHELSMEILAKAKADMTIVDNEGKGVLFYCILPTKRHYRCSLIALEHGADVNNITYEGKPVFLRACEEAHDVKDMCLTFLEKGANPNAINTSTGRTALMESSREGVLEIVRGILERGGEVNAYDNDRHHAAHFAAKGGFFDILKLLFAYNGDMGLIGMDGNTPLHFAAMGGFADCCKYIAQRGCDLKWKNLEHKTPRVVAKDGGFKAASKEIRRAERTAAKLAKTGAKNPNPLWALRLHDWSIEHETSLRNAFKFVDRGDGVVSKDDFVVALEERQEYATSEQLLSVAQMHEKSRGGGVNINEFFKGTKYLSKSYVLGSFGPKKKKRGLGKKPRKGKFVLPLPICTIPENAFPRRPDGGPPYYMIETYQNVSDSHRFNRDHPPEHPIQDDSEWYIDDPSRVFANISFITKAGDLASLKKAIETGIPVDMKDNTYKTPLMIACASGNIDVVKFLIEKGANVNATDNFLWTPLHFACHAGQQDIVELLVKAGASIDATSINNSTPLSRAIESCRLDTVKYLLDMGAKFQIENRKGHAAMDIAKAYADYRIIDMIKEKLDNLPKQADNQKMKGKLPKLKTEGTDVKKEEETLSSIYTVPAITEEKKVHRDSVVYLNSLITSGFTKKVDITFIPKRIWSPEATTAELIRKRELRRERFTYEVDFEDFMMPFQKNITEKAQALEATLKN", "length": 775 }, "evidence": [ { "id": "F1SBK5", "url": "https://omabrowser.org/oma/group/F1SBK5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NU02-1", "protein_name": "Ankyrin repeat and EF-hand domain-containing protein 1", "gene_name": "ANKEF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALADKRLENLQIYKVLQCVRNKDKKQIEKLTKLGYPELINYTEPINGLSALHLASVSNDIDMVSFLLDLGAHPDVQDRMGCTPTMRAAELGHELSMEILAKAKADMTIVDNEGKGVLFYCILPTKRHYRCALIALEHGADVNNSTYEGKPIFLRACEDAHDVKDVCLTFLEKGANPNAINSSTGRTALMEASREGVVEIVRGILERGGEVNAFDNDRHHAAHFAAKGGFFDILKLLFAYNGDVGLISINGNTPLHYAAMGGFADCCKYIAQRGCDLKWKNLDHKTPRAVAKEGGFKAASKEIRRAERIANKLARPGAKNPNPLWALRLHDWSVEREAFLREAFAVLDRGDGSISKNDFVMVLEERQDYASSEQLAAIAHLHEKTRGGGVNINEFFKGTRYLNKSFVLGSYGPKKKEKGMGKKGKKGKFVLPLPICVIPEYAFPRRQDGGPPYYMIETYKNVTDSSRFNRDHPPEHPIQDDSVWYIDDSEKVFSNINIITKAGDLASLKKAFESGIPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVNATDNFLWTPLHFACHAGQQDIVELLVESGALIDAASINNSTPLNRAIESCRLDTVKYLLDIGAKFQLENRKGHSAMDVAKAYADYRIIDLIKEKLDNLPKPAENQKLKGKTPPILKTEGPEIKKEEELLSSIYGVPTTSEGKKVQKGNVVHLNSLITSGYTKKVDITFIPRRIWSPEATTAELIRKRELRRERFTHEVDFDDFMMPFQKNITEKARALEAALKT", "length": 776 }, "evidence": [ { "id": "F1SBK5", "url": "https://omabrowser.org/oma/group/F1SBK5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 144, "end_pos": 146, "annotation": "n_glycosylation_sequon" }, { "start_pos": 181, "end_pos": 183, "annotation": "n_glycosylation_sequon" }, { "start_pos": 41, "end_pos": 43, "annotation": "n_glycosylation_sequon" }, { "start_pos": 461, "end_pos": 463, "annotation": "n_glycosylation_sequon" }, { "start_pos": 552, "end_pos": 554, "annotation": "n_glycosylation_sequon" }, { "start_pos": 590, "end_pos": 592, "annotation": "n_glycosylation_sequon" }, { "start_pos": 591, "end_pos": 593, "annotation": "n_glycosylation_sequon" }, { "start_pos": 762, "end_pos": 764, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SBK5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 776, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SBK5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SBK5" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 144, "end_pos": 146 }, { "start_pos": 181, "end_pos": 183 }, { "start_pos": 41, "end_pos": 43 }, { "start_pos": 461, "end_pos": 463 }, { "start_pos": 552, "end_pos": 554 }, { "start_pos": 590, "end_pos": 592 }, { "start_pos": 591, "end_pos": 593 }, { "start_pos": 762, "end_pos": 764 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBP5-1", "uniprot_ac": "F1SBP5", "uniprot_id": "F1SBP5_PIG", "mass": { "chemical_mass": 70225.0, "monoisotopic_mass": 70225.0 }, "refseq": { "ac": "XP_003125898", "name": "CTTNBP2 N-terminal-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125898" }, "gene_names": [ { "name": "CTTNBP2NL", "type": "recommended", "evidence": [ { "id": "F1SBP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ] }, { "name": "CTTNBP2NL", "type": "synonym", "evidence": [ { "id": "XP_003125898", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125898" } ] } ], "protein_names": [ { "name": "CTTNBP2 N-terminal like", "type": "synonym", "evidence": [ { "id": "F1SBP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBP5/entry#names_and_taxonomy" } ] }, { "name": "CTTNBP2 N-terminal-like protein", "type": "synonym", "evidence": [ { "id": "XP_003125898", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125898" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CTTNBP2NL", "url": "https://www.uniprot.org/uniprotkb/F1SBP5", "locus": { "chromosome": "4", "start_pos": 107959571, "end_pos": 108011611, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006781", "url": "https://www.ensembl.org/id/ENSSSCG00000006781" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006781", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006781", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100520738", "url": "https://www.ncbi.nlm.nih.gov/gene/100520738", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019131", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019131", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520738", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520738", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ANGHFEP", "url": "https://omabrowser.org/oma/group/ANGHFEP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SBP5", "url": "https://www.orthodb.org/?gene=F1SBP5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23166", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23166", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23166:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23166:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09727", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09727", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003125898", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125898", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBP5-1", "url": "https://www.uniprot.org/uniprotkb/F1SBP5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDGEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVRECKKATSKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTKTLKEEMESLKKIVKDLEASHQQSSPSEQLKKPVTMSKGTMTEPPVLVSVFCQTETFQVERIHGSSTAKVTTPGLPGPTTPTSSYAKTNGHFDPELQTTKELITSSSVENQVLPREKPVGLAQEKAVENGGCPVAIETPVPTPSLLPSSGSSPSPSSTASSSLTSSPCSSPVLTKRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLIDNSTAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANTANARGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSPSTTTPLTKTHSQTSSLTTTEDLASSCSSNAVVANGKDVEILLPTSS", "length": 639, "header": "tr|F1SBP5-1|F1SBP5_PIG Isoform 1 of CTTNBP2 N-terminal like OS=Sus scrofa OX=9823 GN=CTTNBP2NL PE=4 SV=2 CANONICAL=F1SBP5-1" }, "isoforms": [ { "isoform_ac": "F1SBP5-1", "url": "https://www.uniprot.org/uniprotkb/F1SBP5/entry#F1SBP5-1", "sequence": { "sequence": "MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDGEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVRECKKATSKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTKTLKEEMESLKKIVKDLEASHQQSSPSEQLKKPVTMSKGTMTEPPVLVSVFCQTETFQVERIHGSSTAKVTTPGLPGPTTPTSSYAKTNGHFDPELQTTKELITSSSVENQVLPREKPVGLAQEKAVENGGCPVAIETPVPTPSLLPSSGSSPSPSSTASSSLTSSPCSSPVLTKRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLIDNSTAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANTANARGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSPSTTTPLTKTHSQTSSLTTTEDLASSCSSNAVVANGKDVEILLPTSS", "length": 639, "header": "tr|F1SBP5-1|F1SBP5_PIG Isoform 1 of CTTNBP2 N-terminal like OS=Sus scrofa OX=9823 GN=CTTNBP2NL PE=4 SV=2 CANONICAL=F1SBP5-1" }, "locus": { "chromosome": "4", "start_pos": 107994685, "end_pos": 107960035, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048948.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048948.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052815.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052815.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 339, "start_aa": "Thr", "end_pos": 339, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr339", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 402, "start_aa": "Thr", "end_pos": 402, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr402", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 551, "start_aa": "Thr", "end_pos": 551, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr551", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520738", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520738", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A3G3-1", "protein_name": "CTTNBP2 N-terminal like", "gene_name": "CTTNBP2NL", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFEALKEANHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSMLVVECKKATAKAAEESQKTAELSLKLEKEKSKVSKLEEELASKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVESLKKALKELEAACQEHGPTEPLQPSLSVMSRGVATDSPAVKSASCQTEFPQADRANPAGASKAVHAAFPSPPTPTHSYAKSNGHCDTDVQTGGELLQPNAAESQAQKEKPTGAAPENTVENGSSPIRTESPVHLLSQLPPSGVSLSPSSTAASSLTPSPCSSPVLSKRLVGAPAGSPGYQSSYQVGINQRFHAARHKFQSQAEQDHQCSGLQSPPARDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANAVSPKSESGHSPSPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPTPLTKASSQPSSLGAPMDVASSCSNNAVVSNGKDIEILLPTSS", "length": 639 }, "evidence": [ { "id": "F1SBP5", "url": "https://omabrowser.org/oma/group/F1SBP5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A8X8-1", "protein_name": "CTTNBP2 N-terminal like", "gene_name": "Cttnbp2nl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDSEKQPVCTNPLSILKAVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATSKAAEEGQKAGELSLKLEKEKSRASKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTRALKEEMESLKKLVKDLEAAQQHSNSSEQGREPVTTSRGTATEPPMRVSVFCQTESIQTERSHSSIMTKLTDTGLPGPSSAPYPYAKANGHCDPETQTTRELTSDSSTENQGPPREKSAVPAQEKPMENGGCPVGTEIPVTMPSHLPSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSSVSSPGYQSSYQVGVNQRFHAARHRFQSQADQDQQASGLQSPPSRDLSPTLLDNSAAKQLARNTVTQVLSRFTNQGPIKPVSPNSSPFGTDYRNLVSTANPRGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSQSVATPGTKTHSQASSLTTTEDLASSCSPSAVVANGKDVEMLVPTSS", "length": 638 }, "evidence": [ { "id": "F1SBP5", "url": "https://omabrowser.org/oma/group/F1SBP5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3IKU2-1", "protein_name": "CTTNBP2 N-terminal-like protein", "gene_name": "Cttnbp2nl", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDSEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATSKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTRALKEEMENLKKFVRDLEAAQRHSGTSEQCREPVTTSKGTATEPPMLVSVFCQTENVQMERSHGSIIAKLTDTGLPCPTTPAYSYAKANGHCDPEIQTARELTSGSSTENQGPPREKSVASAQEKPMENGGCPVGTETPVTMPSHLPSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSSVSSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLLDNSAAKQLARNTVTQVLSRFTNQGPIKPVSPNSSPFGTDYRNLANTANPRGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSQSAATAVTKTHSQASSLTSTEDLASSCSPSAVVANGKDVEILLPTSS", "length": 638 }, "evidence": [ { "id": "F1SBP5", "url": "https://omabrowser.org/oma/group/F1SBP5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q99LJ0-1", "protein_name": "CTTNBP2 N-terminal-like protein", "gene_name": "Cttnbp2nl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDSEKQPVCTNPLSVLKAVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERTRHKQLSSMLVLECRKATSKAAEEGQKAGELSLKLDKEKSRASKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTRALKEEVESLKKLVKDLEAAQQHRSTSEQGREPVTMSRGTATEPPMRVSAFCQTESVQTERSHGSVITKLTDTGLPGPTTAAYSYAKANGHCDPEIQTTRELTSDSSTENQGPPREKSAVAAQEKPVENGGCPVGTETPVTMPSHLPSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSAASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLLDNSAAKQLARNTVTQVLSRFTNQGPIKPVSPNSSPFGTDYRNLASTASPRGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSQSATTPVTKTHSQASSLAATEDLASSCSPSAVVANGKDVEILLPTSS", "length": 638 }, "evidence": [ { "id": "F1SBP5", "url": "https://omabrowser.org/oma/group/F1SBP5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P2B4-1", "protein_name": "CTTNBP2 N-terminal-like protein", "gene_name": "CTTNBP2NL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEKNDGEKQPVCTNPLSILKVVMKQCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQLEFEKSQVKKFEKEQKKLSSQLEEERSRHKQLSSMLVLECKKATNKAAEEGQKAGELSLKLEKEKSRVSKLEEELAAERKRGLQTEAQVEKQLSEFDIEREQLRAKLNREENRTKTLKEEMESLKKIVKDLEASHQHSSPNEQLKKPVTVSKGTATEPLMLMSVFCQTESFPAERTHGSNIAKMTNTGLPGPATPAYSYAKTNGHCDPEIQTTRELTAGNNVENQVPPREKSVALAQEKPVENGGCPVGIETPVPMPSPLSSSGSSLSPSSTASSSLTSSPCSSPVLTKRLLGSSASSPGYQSSYQVGINQRFHAARHKFQSQADQDQQASGLQSPPSRDLSPTLIDNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANTANPRGDTSHSPTPGKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLTPSPSATTPLTKTHSQAASLTTAEDLASSCSSNTVVANGKDVELLLPTSS", "length": 639 }, "evidence": [ { "id": "F1SBP5", "url": "https://omabrowser.org/oma/group/F1SBP5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein localization to actin cytoskeleton", "id": "GO:1903119", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903119", "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "pmid": "" }, { "name": "cell projection", "id": "GO:0042995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042995", "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "pmid": "" }, { "name": "FAR/SIN/STRIPAK complex", "id": "GO:0090443", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090443", "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein phosphatase 2A binding", "id": "GO:0051721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051721", "evidence": [ { "database": "UniProtKB", "id": "F1SBP5", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 258, "end_pos": 260, "annotation": "n_glycosylation_sequon" }, { "start_pos": 494, "end_pos": 496, "annotation": "n_glycosylation_sequon" }, { "start_pos": 49, "end_pos": 51, "annotation": "n_glycosylation_sequon" }, { "start_pos": 525, "end_pos": 527, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBP5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBP5" }, { "id": "PF09727", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09727" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Cortactin-binding protein-2 N-terminal", "eco_id": "ECO_0000259", "start_pos": 5, "end_pos": 188, "start_aa": "Lys", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 339, 402, 551 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 258, "end_pos": 260 }, { "start_pos": 494, "end_pos": 496 }, { "start_pos": 49, "end_pos": 51 }, { "start_pos": 525, "end_pos": 527 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBQ0-1", "uniprot_ac": "F1SBQ0", "uniprot_id": "F1SBQ0_PIG", "mass": { "chemical_mass": 54823.0, "monoisotopic_mass": 54823.0 }, "refseq": { "ac": "XP_020946415", "name": "protein phosphatase 1J isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946415" }, "gene_names": [ { "name": "PPM1J", "type": "recommended", "evidence": [ { "id": "F1SBQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0" } ] }, { "name": "PPM1J", "type": "synonym", "evidence": [ { "id": "XP_020946415", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946415" } ] } ], "protein_names": [ { "name": "Protein phosphatase, Mg2+/Mn2+ dependent 1J", "type": "synonym", "evidence": [ { "id": "F1SBQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0/entry#names_and_taxonomy" } ] }, { "name": "protein phosphatase 1J isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020946415", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946415" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBQ0", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PPM1J", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0", "locus": { "chromosome": "4", "start_pos": 107728919, "end_pos": 107723437, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006774", "url": "https://www.ensembl.org/id/ENSSSCG00000006774" } ] } } ], "crossref": [ { "id": "F1SBQ0", "url": "https://alphafold.ebi.ac.uk/entry/F1SBQ0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006774", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006774", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00143", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00143", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "102162031", "url": "https://www.ncbi.nlm.nih.gov/gene/102162031", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001932", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001932", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015655", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015655", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036457", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036457", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:102162031", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102162031", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RDHSMTG", "url": "https://omabrowser.org/oma/group/RDHSMTG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SBQ0", "url": "https://www.orthodb.org/?gene=F1SBQ0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13832", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13832", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13832:SF305", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13832:SF305", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00481", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00481", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020946415", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946415", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AS99", "url": "https://www.uniprot.org/uniprotkb/A0A287AS99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AS99-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AS99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9R7", "url": "https://www.uniprot.org/uniprotkb/A0A287B9R7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B9R7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B9R7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBQ0", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBQ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLNRVRSAVAHLVSSGGGPPPRPKSPDLPNATSAPPAAPPEAPRSPPARAGSASAAPRKIAEARASFSRPTFLQLSPGGLRRADDHAGRAVQSPPDTGRRLPWSTGYAEVINAGKSRHNEDQACCEVVYVEGRRSVSGAPREPSRGQGLCFYYWGLFDGHAGGGAAEMASRLLHRHIREQLKDLVEILQDPSPPPLCLPSTPGAPGSSDSSHLVGPQPCWPLQKEVTHESLVVGAIENAFQLMDEQMARERRGHQVEGGCCALVVVYLLGKVYVANAGDSRAIIVRNGEIIPMSQEFTPETERQRLQLLGFLKPELLGGEFTHLEFPRRVQPKELGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDHNLRVCSSTLPIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTSDCEVAATVDKVLSAYEPNDPSRYTALAQALVLGARGTPRDRGWRLPNNKLGSGDDISVFIIPLGGPGSYS", "length": 505, "header": "tr|F1SBQ0-1|F1SBQ0_PIG Isoform 1 of Protein phosphatase, Mg2+/Mn2+ dependent 1J OS=Sus scrofa OX=9823 GN=PPM1J PE=4 SV=3 CANONICAL=F1SBQ0-1" }, "isoforms": [ { "isoform_ac": "A0A287AS99-1", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0/entry#A0A287AS99-1", "sequence": { "sequence": "MLNRVRSAVAHLVSSGGGPPPRPKSPDLPNATSAPPAAPPEAPRSPPARAGSASAAPRKIAEARASFSRPTFLQLSPGGLRRADDHAGRAVQSPPDTGRRLPWSTGYAEVINAGKSRHNEDQACCEVVYVEGRRSVSGAPREPSRGQGLCFYYWGLFDGHAGGGAAEMASRLLHRHIREQLKDLPCWPLQKEVTHESLVVGAIENAFQLMDEQMARERRGHQVEGGCCALVVVYLLGKVYVANAGDSRAIIVRNGEIIPMSQEFTPETERQRLQLLGFLKPELLGGEFTHLEFPRRVQPKELGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDHNLRVCSSTLPIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTSDCEVAATVDKVLSAYEPNDPSRYTALAQALVLGARGTPRDRGWRLPNNKLGSGDDISVFIIPLGGPGSYS", "length": 472, "header": "tr|A0A287AS99-1|A0A287AS99_PIG Computationally mapped isoform of Protein phosphatase, Mg2+/Mn2+ dependent 1J OS=Sus scrofa OX=9823 GN=PPM1J PE=4 SV=1 CANONICAL=F1SBQ0-1" }, "locus": { "chromosome": "4", "start_pos": 107728742, "end_pos": 107723468, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055888.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055888.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046940.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046940.1" } ] } }, { "isoform_ac": "A0A287B9R7-1", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0/entry#A0A287B9R7-1", "sequence": { "sequence": "MASRLLHRHIREQLKDLPCWPLQKEVTHESLVVGAIENAFQLMDEQMARERRGHQVEGGCCALVVVYLLGKVYVANAGDSRAIIVRNGEIIPMSQEFTPETERQRLQLLGFLKPELLGGEFTHLEFPRRVQPKELGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDHNLRVCSSTLPIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTSDCEVAATVDKVLSAYEPNDPSRYTALAQALVLGARGTPRDRGWRLPNNKLGSGDDISVFIIPLGGPGSYS", "length": 305, "header": "tr|A0A287B9R7-1|A0A287B9R7_PIG Computationally mapped isoform of Protein phosphatase, Mg2+/Mn2+ dependent 1J OS=Sus scrofa OX=9823 GN=PPM1J PE=4 SV=1 CANONICAL=F1SBQ0-1" }, "locus": { "chromosome": "4", "start_pos": 107728742, "end_pos": 107725745, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048125.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048125.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058093.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058093.1" } ] } }, { "isoform_ac": "F1SBQ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0/entry#F1SBQ0-1", "sequence": { "sequence": "MLNRVRSAVAHLVSSGGGPPPRPKSPDLPNATSAPPAAPPEAPRSPPARAGSASAAPRKIAEARASFSRPTFLQLSPGGLRRADDHAGRAVQSPPDTGRRLPWSTGYAEVINAGKSRHNEDQACCEVVYVEGRRSVSGAPREPSRGQGLCFYYWGLFDGHAGGGAAEMASRLLHRHIREQLKDLVEILQDPSPPPLCLPSTPGAPGSSDSSHLVGPQPCWPLQKEVTHESLVVGAIENAFQLMDEQMARERRGHQVEGGCCALVVVYLLGKVYVANAGDSRAIIVRNGEIIPMSQEFTPETERQRLQLLGFLKPELLGGEFTHLEFPRRVQPKELGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDHNLRVCSSTLPIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTSDCEVAATVDKVLSAYEPNDPSRYTALAQALVLGARGTPRDRGWRLPNNKLGSGDDISVFIIPLGGPGSYS", "length": 505, "header": "tr|F1SBQ0-1|F1SBQ0_PIG Isoform 1 of Protein phosphatase, Mg2+/Mn2+ dependent 1J OS=Sus scrofa OX=9823 GN=PPM1J PE=4 SV=3 CANONICAL=F1SBQ0-1" }, "locus": { "chromosome": "4", "start_pos": 107728742, "end_pos": 107723468, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007420.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007420.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007225.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007225.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 201, "start_aa": "Thr", "end_pos": 201, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr201", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBQ0", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102162031", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102162031", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AET4-1", "protein_name": "Protein phosphatase, Mg2+/Mn2+ dependent 1J", "gene_name": "PPM1J", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLLRVRSAVSHLVAGLGPGPGTQSPAEPRHGGGGGSGAGGEEGPRVAAFCRPAFLQLTPEELRRADDHTGRAVQSPRDGRRRLPWSTGYAEVINAGKSQHNEDQACCEVVFVERRPSPRGRLPCRDGSGEPDRGRKGFYFHYWALFDGHAGSGAAVMASKRLHLHICEQLRDLVDILQDPSPPPICLQHDAELSQAEDNGEVPSDALPRFHLEKAVSHESLVIGAIENAFKHMDEQIEQERTSQHISGGCCALAAVYLMGKFYVANAGDSRAIIIRNGEIIPMSREFTPETERQRLQFLAFLRPELLGKEFTHLEFPRRIQPKELGKKMLYRDQSMNGWAYKKIEEDDLKFPLIYGEGKKARVMATIGVTRGLGDHDLKVFSSNIHIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDKEVASVVMEVLTSYEPNDPCRYTVVAQELVVRSRGVLKERGWRLPNDKLGSGDDISVFVIPLGGPGNYM", "length": 495 }, "evidence": [ { "id": "F1SBQ0", "url": "https://omabrowser.org/oma/group/F1SBQ0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q149T7-1", "protein_name": "Protein phosphatase 1J", "gene_name": "Ppm1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNRVRSAVAHLVSSGGTSSQRSKSPDLPNATSAPPAAQETPKSSREKPGNQVGAPQKTAETTVSFSRPTFLQLSPGGLRRADDHAGRAVQSPPDTGRRLPWSTGYAEVINAGKSRHNEDQACCEVVYVESRRSRSVTGVSREPSHNQGFCFYYWGLFDGHAGGGAAEMASRLLHRHIREQLKDLVEILKDPLPPPLCLPSTPGTPGAPSPSQLVSPQSCWSPQKEVTHDSLIVGAIENAFHLMDEQMARERRGHQVEGGCCALVVLYLLGKMYVANAGDSRAIIVRNGEIIPMSREFTPETERQRLQLLGFLKPELLGSEFTHLEFPRRVQPKELGQRMLYRDQNMTGWAYKKIEVEDLRFPLVCGEGKKARVMATIGVTRGLGDHNLKVCSSTLSIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDSEVAATVDRVLSSYEPNDPSRYTALAQALVLGARGIPRDRGWRLPNNKLGSGDDISVFVIPLGGPGSSYS", "length": 507 }, "evidence": [ { "id": "F1SBQ0", "url": "https://omabrowser.org/oma/group/F1SBQ0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5JR12-1", "protein_name": "Protein phosphatase 1J", "gene_name": "PPM1J", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLNRVRSAVAHLVSSGGAPPPRPKSPDLPNAASAPPAAAPEAPRSPPAKAGSGSATPAKAVEARASFSRPTFLQLSPGGLRRADDHAGRAVQSPPDTGRRLPWSTGYAEVINAGKSRHNEDQACCEVVYVEGRRSVTGVPREPSRGQGLCFYYWGLFDGHAGGGAAEMASRLLHRHIREQLKDLVEILQDPSPPPLCLPTTPGTPDSSDPSHLLGPQSCWSSQKEVSHESLVVGAVENAFQLMDEQMARERRGHQVEGGCCALVVIYLLGKVYVANAGDSRAIIVRNGEIIPMSREFTPETERQRLQLLGFLKPELLGSEFTHLEFPRRVLPKELGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDHSLKVCSSTLPIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTTDCEVAATVDRVLSAYEPNDHSRYTALAQALVLGARGTPRDRGWRLPNNKLGSGDDISVFVIPLGGPGSYS", "length": 505 }, "evidence": [ { "id": "F1SBQ0", "url": "https://omabrowser.org/oma/group/F1SBQ0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q641Y6-1", "protein_name": "Protein phosphatase 1J", "gene_name": "Ppm1j", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLNRVRSAVAHLVSSSGTSSQRSKSPDLPKAISPPPGALETPKSPGTKSGNEIPAPQKTAETPVSFSRPTFLQLSPGGLRRADDHVGRAVQSPPDTGRRLPWSTGYAEVINAGKSRHNEDQACCEVVYVESRRSITGVSREPSHNQGFSFYYWGLFDGHAGGGAAEMASRLLHRHIREQLKDLVEILQDPLPPPLCLPSTPGTPGVSSPSQLVSPQSWSPQKEVTHDSLVVGAIENAFQLMDEQMARERRGHLVEGGCCALVVVYLLGKMYVANAGDSRAIIVRNGEIIPMSREFTPETERQRLQLLGFLKPELLGSEFTHLEFPRRVQPKELGQRMLYRDQNMTGWAYKKIELEDLRFPLVCGEGKKARVMATIGVTRGLGDHNLKVCSSTLPIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDSEVAATVDRVLSTYEPNDPSRYTALAQALVLGARGIPRDRGWRLPNNKLGSGDDISVFVIPLGGPGSSYS", "length": 504 }, "evidence": [ { "id": "F1SBQ0", "url": "https://omabrowser.org/oma/group/F1SBQ0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity", "id": "GO:0004741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004741", "evidence": [ { "database": "UniProtKB", "id": "F1SBQ0", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0" } ], "pmid": "" }, { "name": "protein serine/threonine phosphatase activity", "id": "GO:0004722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004722", "evidence": [ { "database": "UniProtKB", "id": "F1SBQ0", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F1SBQ0", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 30, "end_pos": 32, "annotation": "n_glycosylation_sequon" }, { "start_pos": 345, "end_pos": 347, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SBQ0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 505, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SBQ0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SBQ0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBQ0" }, { "id": "PS51746", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51746" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPM-type phosphatase", "eco_id": "ECO_0000259", "start_pos": 104, "end_pos": 498, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 201 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 30, "end_pos": 32 }, { "start_pos": 345, "end_pos": 347 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBS0-1", "uniprot_ac": "F1SBS0", "uniprot_id": "F1SBS0_PIG", "mass": { "chemical_mass": 107404.0, "monoisotopic_mass": 107404.0 }, "refseq": {}, "gene_names": [ { "name": "DENND2C", "type": "recommended", "evidence": [ { "id": "F1SBS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBS0" } ] } ], "protein_names": [ { "name": "DENN domain containing 2C", "type": "synonym", "evidence": [ { "id": "F1SBS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBS0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBS0", "url": "https://www.uniprot.org/uniprotkb/F1SBS0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DENND2C", "url": "https://www.uniprot.org/uniprotkb/F1SBS0", "locus": { "chromosome": "4", "start_pos": 105990475, "end_pos": 105895118, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006755", "url": "https://www.ensembl.org/id/ENSSSCG00000006755" } ] } } ], "crossref": [ { "id": "F1SBS0", "url": "https://alphafold.ebi.ac.uk/entry/F1SBS0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006755", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006755", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001194", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001194", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005112", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005112", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005113", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005113", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043153", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043153", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15288", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15288", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15288:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15288:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02141", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02141", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03455", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03455", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8876198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R8G5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8G5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8G5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8G5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBS0", "url": "https://www.uniprot.org/uniprotkb/F1SBS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBS0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHPTGNMDVGFSRSAVQTLSRSHCKNIKQKISQWEGRTNGISSPDKWHPKDFGVKYNNYNQEILLKTNPVTEEKSRKSDGTGSHNADPGLEDAKSRNRSEDESEKHEYDDRRFCKSESESKWVCSRVKQIESWKEVLDPETSLPPGNFYTSQILWKKIEALPPDKVLNLALERCDSSEKELDFRVLDSSYGITKSLENIYSEPEGQECGPSINPLPKPRRTFRYLSESGVTPFKERNCDRKYCEKNSCAESSLTASQEPEPKKYGGKIKGRSKRKSFEFEDIQHFRNRNSRKIHEELGRNSGSALYYTQSEDNIYEDIIYPTKENPYEDIPVQPLPMWRSPSAWKLPPPKSTFRAPKLPPKPQFLHRKTMELKNSQAYIRSKLSKETTLPVTLTEWKLFRAGEVANRKRKNLPRLVLKIDDIFESKRGKKRVKLHPYTGKDVPPSKGETSGYESDAEYLPKNRHKRIAQLQQSSKRNPHYQTLERDLIELQEQQLFELFVVVSLQKKPSEISYSPQVIQQFPSKGDHGFKQSKDTEERLKVIPKFCFPDSKDWVPTSELKSETFSFVLTGEDGSRWFGYCKKLLPEGKGKRLPEVYCMVSRLGCFNLFSKILDEVEKRREMSPALVYPFMRSVMEAPFPAPGRTITVKSYLPGAGDESIELCRPLDSRLEHVDFECLFKCLSVCHLLRVCASLLLERRVIFVANSLSTLSKCGHAVVATLYPFTWQHTYIPVLPASMIDIVCSPTPFLIGILSCSLPQLQDLPIEEVLIVDLCADKFLQEVSDEDEILPPKLQAALMQILEERNEILAQEQNFSQDVTLNSLVSEAFVRFFVELVGHYSLNMTVTERGERVFQREPFRKSHTSRSVRHFLDLFMETQMFAGFIQDRELRKSGVKGLFEVRALQYLETIPESEPSGVNRILRSLGSKMKFLQKK", "length": 933, "header": "tr|F1SBS0-1|F1SBS0_PIG Isoform 1 of DENN domain containing 2C OS=Sus scrofa OX=9823 GN=DENND2C PE=4 SV=4 CANONICAL=F1SBS0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R8G5-1", "url": "https://www.uniprot.org/uniprotkb/F1SBS0/entry#A0A5G2R8G5-1", "sequence": { "sequence": 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OS=Sus scrofa OX=9823 GN=DENND2C PE=4 SV=2 CANONICAL=F1SBS0-1" }, "locus": { "chromosome": "4", "start_pos": 105989471, "end_pos": 105948997, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070501.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070501.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070412.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070412.2" } ] } }, { "isoform_ac": "F1SBS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBS0/entry#F1SBS0-1", "sequence": { "sequence": 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"Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517144", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517144", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "fatty acid metabolic process", "id": "GO:0006631", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006631", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" }, { "name": "DNA damage response", "id": "GO:0006974", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006974", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" }, { "name": "regulation of lipid storage", "id": "GO:0010883", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010883", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" }, { "name": "regulation of mitochondrial membrane permeability involved in programmed necrotic cell death", "id": "GO:1902445", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902445", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" }, { "name": "oxidative RNA demethylation", "id": "GO:0035513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035513", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" }, { "name": "tRNA demethylase activity", "id": "GO:1990984", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990984", "evidence": [ { "database": "UniProtKB", "id": "F1SBT3", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "54576", "name": "", "equation": "an N(1)-methyladenosine in tRNA + 2-oxoglutarate + O2 = an adenosine in tRNA + formaldehyde + succinate + CO2", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "54576", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/54576" } ] }, { "id": "85431", "name": "", "equation": "N(2)-dimethylguanosine in tRNA + 2 2-oxoglutarate + 2 O2 = guanosine in tRNA + 2 formaldehyde + 2 succinate + 2 CO2", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "85431", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/85431" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SBT3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 221, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SBT3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SBT3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBT3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBT3" }, { "id": "PF13532", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13532" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Alpha-ketoglutarate-dependent dioxygenase AlkB-like", "eco_id": "ECO_0000259", "start_pos": 75, "end_pos": 203, "start_aa": "Glu", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBX0-1", "uniprot_ac": "F1SBX0", "uniprot_id": "F1SBX0_PIG", "mass": { "chemical_mass": 303075.0, "monoisotopic_mass": 303075.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Protein piccolo", "type": "recommended", "evidence": [ { "id": "F1SBX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBX0/entry#names_and_taxonomy" } ] }, { "name": "Aczonin", "type": "synonym", "evidence": [ { "id": "F1SBX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBX0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBX0", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/F1SBX0", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000015401", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015401", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04031", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04031", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd06714", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06714", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001565", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001565", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CSPRIVI", "url": "https://omabrowser.org/oma/group/CSPRIVI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14113", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14113", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14113:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14113:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00595", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00595", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SBX0", "url": "https://www.uniprot.org/uniprotkb/F1SBX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBX0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBX0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LNF0", "url": "https://www.uniprot.org/uniprotkb/I3LNF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LNF0-1", "url": "https://www.uniprot.org/uniprotkb/I3LNF0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVTAPETAATIATPLVGSVTMVETTAVPRSNGSPVTKICTTSPPPVPPKPSSIPSGLVFTHRPEPSKPPVAPKPAVPQPLVTTQKPTDIHPKPTGLPLTSNMTLNLVTSTDYKLPSPTSPLSPHSNKSSPRFSKSLMETYVVITLPSEPGTPTDSSASQAITSWPMGSPPKDLISIEPVFSVVPPMTAAEISSSSQQSLYFSGALETFSALPVTTLSSFQATPTQFLTTEVSKAEVSVARSTVPSVGLSSVSISIPSEPLALDHLHLEKHQHKENVKLQLVGDAIDLRTVPKVEVQVTEKCMDLSASAMDVKRQTMTSEIYGRQISAVQPSIINLSAASSGVTPISLVTETVTVVTCTASASYTMGTESLVAIDHAPAAPLQLTTSKHAEPPYRGPSGQTFPAVREEAPINLSLSTSAHAMTSALTKPITAPPVGVTNGWTDSTTFQGITDGEVVDLSTTKSHRTVVTMDESTSNVVTKVIEDDEKPVDLTAGRRAVCCDVVYKLPFGRSCTAQQPATTLPEDRFGYRDDHYQYDRSGPYGYRGIGGMKPSMSDTNLAEAGHFFYKSKNAFDYSGGTDAAVDLTSGRITTGEVMDYSSKTTGPYPETRQVISGVGISTPQYSTARMTPPPGSQYGVGSVLRSSNGVVYSSVATPIPSTFAITTQPGSIFSTTLRDLPGVHTTDSITSLSSLHQSQPMPRSYFLTTGASETDIAVTGIDISASLQTITMETLTAETMDSVPSLTTASEVFSEVVGEESALLIVPEEDKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMVQKKLEELQSMKQHLLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQKIRQIYQYNYDPSGTASPQTTTEQAILEGQYAAPEGGQFWATEDTTTTASAVVAIEIPQSQGWYTVQSDGVTQYIAPPGILSTVSEIPLTDVVVKEEKPSKKRSSGAKVRGQYDEMGENLADDPRCFKKIVDSGVQTDDEDAADRSYVSRRRRTKKSVDTSVQTDDEDQDEWDMPTRSRRKARVGKYSDSTTEADKTKPLSKVSSIAVQTVAEISVQTEPVGTIRTPSIRARMDAKVEIIKHISAPEKTYKGGSLGCQTEADSDTQSPQYLSATSPSKDKKRPTPLEIGYSTHLRADSTLQLAPSPPKSPKVLYSPISPLSPGKALESAFVPYEKPLPDDISPQKVLHPDMAKVPPASPKAAKMMQRSMSDPKPLSPTADESSRAPFQYTEGFTAKGSQTMTPSGTQKKVKRTLPNPPPEEVSTGTQSTYSTVGTVSRRRICRTNTMARAKILQDIDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEALLKEREKRERAYLQGVAEDRDYMSDSEVSSARPTRIESQHGIERPRTAPQPEFSQFIPPQTQTESQLVPPTSPYTQYQYSSPALPTQAPTPYTQQSHFQQQTLYHQQVSPYQTQPTFQAVATMSFTPQAQPTPTPQPSYQLPSQMMVIQQKPRQTALYLEPKITSNYEVIRNQPLMIAPVSTDNTYAVSHLGSKYNSLDLRIGLEERSSMASSPISSISADSFYADIDHHTSRNYVLIDDIGEITKGTGALSTAFSLHEKDLSKTDRLLRTTETRRSQEVTDFLAPLQTSSRLHSYVKAEEDPMEDPYELKLLKQQIKQEFRRGAESLDHLAGLSHYYHADTGYRHFPKSEKYSISRLTLEKQAAKQLPAAILYQKQSKHKKSLIDPKMSKFSPIQESRDLEPDYSSYMTSSTSSIGGISSRARLLQDDITFGLRKNITDQQKFMGSSLGTGLGTLGNTIRSALQDEADKPYSSGSRSRPSSRPSSVYGLDLSLKRDSSSSSLRLKAQEAEALDVSFSHASPSGRTKPTSLPISQSRGRIPIVAQNSEEESPLSPVGQPMGMARAAAGPLPPISADTRDQFGSSHSLPEVQQHMREESRTRGYDRDIAFIMDDFQHAMSDSEAYHLRREETDWFDKPRESRLENGHGLDRKLPERLVHSRPLSQHQEQIIQMNGKTVQYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLAEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNMLSDSENPQHLELHEPPKAVDKAKSPGVDPKQLAAELQKVSLQQSPLVLSSVVEKGSHVHSGPTSAGSSSVPSPGQPGSPSVSKKKHSSSKPTDAAKVVSHPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLKKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTESIDHGKSHSSQSSQQSPKPSVIKSRSHGIFPDPSKDMQVPTIEKSHSSPGSSKSSSEGHLRSHGPSRSQSKTSVTQTHLEDAGAAIAAAEAAVQQLRLQPTHKSGQSNHARKQHRHSIAGVLPIQRTQSDNLPPPANGNQDQSQLALRKVMSDGPVKPEGAKPTNHRPAESSVSTGSSGSSFGSGYSVDSEGSSSTAGETNVFPIPRIGKMGQNGQEPIKQPGVGAGLADTEVKTQVMGEIKIALKKEMKTDGEQLIVEILQCRNITYKFKSPDHLPDLYVKIYVMNISTQKKVIKKKTRVCRHDREPSFNETFRFSLSPAGHSLQILLFSNGGKFMKKTLIGEACIWLDKVDLRKRIVNWHKLLVSPTQTH", "length": 2760, "header": "tr|F1SBX0-1|F1SBX0_PIG Isoform 1 of Protein piccolo OS=Sus scrofa OX=9823 GN= PE=1 SV=3 CANONICAL=F1SBX0-1" }, "isoforms": [ { "isoform_ac": "F1SBX0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBX0/entry#F1SBX0-1", "sequence": { "sequence": "MVTAPETAATIATPLVGSVTMVETTAVPRSNGSPVTKICTTSPPPVPPKPSSIPSGLVFTHRPEPSKPPVAPKPAVPQPLVTTQKPTDIHPKPTGLPLTSNMTLNLVTSTDYKLPSPTSPLSPHSNKSSPRFSKSLMETYVVITLPSEPGTPTDSSASQAITSWPMGSPPKDLISIEPVFSVVPPMTAAEISSSSQQSLYFSGALETFSALPVTTLSSFQATPTQFLTTEVSKAEVSVARSTVPSVGLSSVSISIPSEPLALDHLHLEKHQHKENVKLQLVGDAIDLRTVPKVEVQVTEKCMDLSASAMDVKRQTMTSEIYGRQISAVQPSIINLSAASSGVTPISLVTETVTVVTCTASASYTMGTESLVAIDHAPAAPLQLTTSKHAEPPYRGPSGQTFPAVREEAPINLSLSTSAHAMTSALTKPITAPPVGVTNGWTDSTTFQGITDGEVVDLSTTKSHRTVVTMDESTSNVVTKVIEDDEKPVDLTAGRRAVCCDVVYKLPFGRSCTAQQPATTLPEDRFGYRDDHYQYDRSGPYGYRGIGGMKPSMSDTNLAEAGHFFYKSKNAFDYSGGTDAAVDLTSGRITTGEVMDYSSKTTGPYPETRQVISGVGISTPQYSTARMTPPPGSQYGVGSVLRSSNGVVYSSVATPIPSTFAITTQPGSIFSTTLRDLPGVHTTDSITSLSSLHQSQPMPRSYFLTTGASETDIAVTGIDISASLQTITMETLTAETMDSVPSLTTASEVFSEVVGEESALLIVPEEDKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMVQKKLEELQSMKQHLLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQKIRQIYQYNYDPSGTASPQTTTEQAILEGQYAAPEGGQFWATEDTTTTASAVVAIEIPQSQGWYTVQSDGVTQYIAPPGILSTVSEIPLTDVVVKEEKPSKKRSSGAKVRGQYDEMGENLADDPRCFKKIVDSGVQTDDEDAADRSYVSRRRRTKKSVDTSVQTDDEDQDEWDMPTRSRRKARVGKYSDSTTEADKTKPLSKVSSIAVQTVAEISVQTEPVGTIRTPSIRARMDAKVEIIKHISAPEKTYKGGSLGCQTEADSDTQSPQYLSATSPSKDKKRPTPLEIGYSTHLRADSTLQLAPSPPKSPKVLYSPISPLSPGKALESAFVPYEKPLPDDISPQKVLHPDMAKVPPASPKAAKMMQRSMSDPKPLSPTADESSRAPFQYTEGFTAKGSQTMTPSGTQKKVKRTLPNPPPEEVSTGTQSTYSTVGTVSRRRICRTNTMARAKILQDIDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEALLKEREKRERAYLQGVAEDRDYMSDSEVSSARPTRIESQHGIERPRTAPQPEFSQFIPPQTQTESQLVPPTSPYTQYQYSSPALPTQAPTPYTQQSHFQQQTLYHQQVSPYQTQPTFQAVATMSFTPQAQPTPTPQPSYQLPSQMMVIQQKPRQTALYLEPKITSNYEVIRNQPLMIAPVSTDNTYAVSHLGSKYNSLDLRIGLEERSSMASSPISSISADSFYADIDHHTSRNYVLIDDIGEITKGTGALSTAFSLHEKDLSKTDRLLRTTETRRSQEVTDFLAPLQTSSRLHSYVKAEEDPMEDPYELKLLKQQIKQEFRRGAESLDHLAGLSHYYHADTGYRHFPKSEKYSISRLTLEKQAAKQLPAAILYQKQSKHKKSLIDPKMSKFSPIQESRDLEPDYSSYMTSSTSSIGGISSRARLLQDDITFGLRKNITDQQKFMGSSLGTGLGTLGNTIRSALQDEADKPYSSGSRSRPSSRPSSVYGLDLSLKRDSSSSSLRLKAQEAEALDVSFSHASPSGRTKPTSLPISQSRGRIPIVAQNSEEESPLSPVGQPMGMARAAAGPLPPISADTRDQFGSSHSLPEVQQHMREESRTRGYDRDIAFIMDDFQHAMSDSEAYHLRREETDWFDKPRESRLENGHGLDRKLPERLVHSRPLSQHQEQIIQMNGKTVQYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLAEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNMLSDSENPQHLELHEPPKAVDKAKSPGVDPKQLAAELQKVSLQQSPLVLSSVVEKGSHVHSGPTSAGSSSVPSPGQPGSPSVSKKKHSSSKPTDAAKVVSHPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLKKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTESIDHGKSHSSQSSQQSPKPSVIKSRSHGIFPDPSKDMQVPTIEKSHSSPGSSKSSSEGHLRSHGPSRSQSKTSVTQTHLEDAGAAIAAAEAAVQQLRLQPTHKSGQSNHARKQHRHSIAGVLPIQRTQSDNLPPPANGNQDQSQLALRKVMSDGPVKPEGAKPTNHRPAESSVSTGSSGSSFGSGYSVDSEGSSSTAGETNVFPIPRIGKMGQNGQEPIKQPGVGAGLADTEVKTQVMGEIKIALKKEMKTDGEQLIVEILQCRNITYKFKSPDHLPDLYVKIYVMNISTQKKVIKKKTRVCRHDREPSFNETFRFSLSPAGHSLQILLFSNGGKFMKKTLIGEACIWLDKVDLRKRIVNWHKLLVSPTQTH", "length": 2760, "header": "tr|F1SBX0-1|F1SBX0_PIG Isoform 1 of Protein piccolo OS=Sus scrofa OX=9823 GN= PE=1 SV=3 CANONICAL=F1SBX0-1" }, "locus": { "chromosome": "9", "start_pos": 97508495, "end_pos": 97321262, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016776.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016776.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016328.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016328.3" } ] } }, { "isoform_ac": "I3LNF0-1", "url": "https://www.uniprot.org/uniprotkb/F1SBX0/entry#I3LNF0-1", "sequence": { "sequence": "MVTAPETAATIATPLVGSVTMVETTAVPRSNGSPVTKICTTSPPPVPPKPSSIPSGLVFTHRPEPSKPPVAPKPAVPQPLVTTQKPTDIHPKPTGLPLTSNMTLNLVTSTDYKLPSPTSPLSPHSNKSSPRFSKSLMETYVVITLPSEPGTPTDSSASQAITSWPMGSPPKDLISIEPVFSVVPPMTAAEISSSSQQSLYFSGALETFSALPVTTLSSFQATPTQFLTTEVSKAEVSVARSTVPSVGLSSVSISIPSEPLALDHLHLEKHQHKENVKLQLVGDAIDLRTVPKVEVQVTEKCMDLSASAMDVKRQTMTSEIYGRQISAVQPSIINLSAASSGVTPISLVTETVTVVTCTASASYTMGTESLVAIDHAPAAPLQLTTSKHAEPPYRGPSGQTFPAVREEAPINLSLSTSAHAMTSALTKPITAPPVGVTNGWTDSTTFQGITDGEVVDLSTTKSHRTVVTMDESTSNVVTKVIEDDEKPVDLTAGRRAVCCDVVYKLPFGRSCTAQQPATTLPEDRFGYRDDHYQYDRSGPYGYRGIGGMKPSMSDTNLAEAGHFFYKSKNAFDYSGGTDAAVDLTSGRITTGEVMDYSSKTTGPYPETRQVISGVGISTPQYSTARMTPPPGSQYGVGSVLRSSNGVVYSSVATPIPSTFAITTQPGSIFSTTLRDLPGVHTTDSITSLSSLHQSQPMPRSYFLTTGASETDIAVTGIDISASLQTITMETLTAETMDSVPSLTTASEVFSEVVGEESALLIVPEEDKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMVQKKLEELQSMKQHLLYQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQKIRQIYQYNYDPSGTASPQTTTEQAILEGQYAAPEGGQFWATEDTTTTASAVVAIEIPQSQGWYTVQSDGVTQYIAPPGILSTVSEIPLTDVVVKEEKPSKKRSSGAKVRGQYDEMGENLADDPRCFKKIVDSGVQTDDEDAADRSYVSRRRRTKKSVDTSVQTDDEDQDEWDMPTRSRRKARVGKYSDSTTEADKTKPLSKVSSIAVQTVAEISVQTEPVGTIRTPSIRARMDAKVEIIKHISAPEKTYKGGSLGCQTEADSDTQSPQYLSATSPSKDKKRPTPLEIGYSTHLRADSTLQLAPSPPKSPKVLYSPISPLSPGKALESAFVPYEKPLPDDISPQKVLHPDMAKVPPASPKAAKMMQRSMSDPKPLSPTADESSRAPFQYTEGFTAKGSQTMTPSGTQKKVKRTLPNPPPEEVSTGTQSTYSTVGTVSRRRICRTNTMARAKILQDIDRELDLVERESAKLRKKQAELDEEEKEIDAKLRYLEMGINRRKEALLKEREKRERAYLQGVAEDRDYMSDSEVSSARPTRIESQHGIERPRTAPQPEFSQFIPPQTQTESQLVPPTSPYTQYQYSSPALPTQAPTPYTQQSHFQQQTLYHQQVSPYQTQPTFQAVATMSFTPQAQPTPTPQPSYQLPSQMMVIQQKPRQTALYLEPKITSNYEVIRNQPLMIAPVSTDNTYAVSHLGSKYNSLDLRIGLEERSSMASSPISSISADSFYADIDHHTSRNYVLIDDIGEITKGTGALSTAFSLHEKDLSKTDRLLRTTETRRSQEVTDFLAPLQTSSRLHSYVKAEEDPMEDPYELKLLKQQIKQEFRRGAESLDHLAGLSHYYHADTGYRHFPKSEKYSISRLTLEKQAAKQLPAAILYQKQSKHKKSLIDPKMSKFSPIQESRDLEPDYSSYMTSSTSSIGGISSRARLLQDDITFGLRKNITDQQKFMGSSLGTGLGTLGNTIRSALQDEADKPYSSGSRSRPSSRPSSVYGLDLSLKRDSSSSSLRLKAQEAEALDVSFSHASPSGRTKPTSLPISQSRGRIPIVAQNSEEESPLSPVGQPMGMARAAAGPLPPISADTRDQFGSSHSLPEVQQHMREESRTRGYDRDIAFIMDDFQHAMSDSEAYHLRREETDWFDKPRESRLENGHGLDRKLPERLVHSRPLSQHQEQIIQMNGKTVQYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLAEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNMLSDSENPQHLELHEPPKAVDKAKSPGVDPKQLAAELQKVSLQQSPLVLSSVVEKGSHVHSGPTSAGSSSVPSPGQPGSPSVSKKKHSSSKPTDAAKVVSHPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLKKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQTESIDHGKSHSSQSSQQSPKPSVIKSRSHGIFPDPSKDMQVPTIEKSHSSPGSSKSSSEGHLRSHGPSRSQSKTSVTQTHLEDAGAAIAAAEAAVQQLRLQPTNGNQDQSQLALRKVMSDGPVKPEGAKPTNHRPAESSVSTGSSGSSFGSGYSVDSEGSSSTAGETNVFPIPRIGKMGQNGQEPIKQPGVGAGLADTEVKTQVMGEIKIALKKEMKTDGEQLIVEILQCRNITYKFKSPDHLPDLYVKIYVMNISTQKKVIKKKTRVCRHDREPSFNETFRFSLSPAGHSLQILLFSNGGKFMKKTLIGEACIWLDKVDLRKRIVNWHKLLVSPTQTH", "length": 2716, "header": "tr|I3LNF0-1|I3LNF0_PIG Computationally mapped isoform of Protein piccolo OS=Sus scrofa OX=9823 GN= PE=1 SV=2 CANONICAL=F1SBX0-1" }, "locus": { "chromosome": "9", "start_pos": 97508495, "end_pos": 97321262, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027728.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027728.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025624.2", "url": "https://www.ensembl.org/id/ENSSSCP00000025624.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1501, "start_aa": "Thr", "end_pos": 1501, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1501", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1503, "start_aa": "Thr", "end_pos": 1503, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1503", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 2213, "start_aa": "Thr", "end_pos": 2213, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr2213", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBX0", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SBX0", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" } ], "pmid": "" }, { "name": "calcium-dependent phospholipid binding", "id": "GO:0005544", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005544", "evidence": [ { "database": "UniProtKB", "id": "F1SBX0", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "presynaptic active zone", "id": "GO:0048786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048786", "evidence": [ { "database": "UniProtKB", "id": "F1SBX0", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SBX0", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 126, "end_pos": 128, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1806, "end_pos": 1808, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2306, "end_pos": 2308, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2327, "end_pos": 2329, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2653, "end_pos": 2655, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2675, "end_pos": 2677, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2699, "end_pos": 2701, "annotation": "n_glycosylation_sequon" }, { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" }, { "start_pos": 334, "end_pos": 336, "annotation": "n_glycosylation_sequon" }, { "start_pos": 411, "end_pos": 413, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 2252, "end_pos": 2381, "start_aa": "Ile", "end_aa": "Tyr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SBX0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBX0" }, { "id": "PS50106", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50106" } ], "ann_type": "Domain_Extent_Annotation", 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"categories": [ "Protein Classification" ] }, { "id": "PTHR24399:SF74", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24399:SF74", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SC26-1", "url": "https://www.uniprot.org/uniprotkb/F1SC26-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/F1SC26/entry#F1SC26-1", "sequence": { "sequence": "MAAINPWASWGILTDHSWGIAAVDPWASWALCPQDPAWRVEETPEERRRGPGLPSAQARELVTFKDVAVDFTQEEWGQLDPVQRTLYRDVMLETYGHLLSVGHQMAKPEVISLLEQGEEPWSTEQPYSPPGTCPEWMRNLESKALIPTRSIFEEEQSHSVKLERYIWDDPWFSRLEVLGCKDQLEVCRMNQSTAMRQMVFMQKQVLSQRGSEFCELGTGCSQSLNIVPSQKVSQIEHFYKPDTNAESWRCNSAIMYADKLTCEHSEYDKAFYQSVQPVHPARGHTGDNIFKCTDAVTSFNHILHFGDHMGMHTGEKLYEYKECHQIFNQSPSFSEHPRLHIGGNQYDYKEYENIFYFSSFMEHQKIGTVETAYKYNEWEKVFGYDSFLTQHTSTYTAEKPYEYNECGTSFIWSSYLIQHKKTHTGEKPYECDKCGKVFRNRSALTKHERTHTGIKPYECNKCGKAFSWNSHLIVHKRIHTGEKPYVCNECGKSFNWNSHLIGHQRTHTGEKPFECTECGKSFSWSSHLIAHMRMHTGEKPFKCDECEKAFRDYSALSKHERTHSGAKPYKCTECGKSFSWSSHLIAHQRTHTGEKPYNCQECGKAFRERSALTKHEIIHSGIKPYECNKCGKSCSQMAHLVRHQRTHTGEKPYECNKCGKSFSQSCHLVAHRRIHTGEKPYKCNQCERSFNCSSHLIAHRRTHTGEKPYRCNECGKAFNESSSLIVHLRNHTGEKPYKCNHCEKAFCKNSSLIIHQRMHSGEKRFICNDCGKAFSGHSALLQHRRSHSEEKLCELN", "length": 796, "header": "tr|F1SC26-1|F1SC26_PIG Isoform 1 of Zinc finger protein 606 OS=Sus scrofa OX=9823 GN=ZNF606 PE=3 SV=2 CANONICAL=F1SC26-1" }, "locus": { "chromosome": "6", "start_pos": 62717397, "end_pos": 62696869, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061223.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061223.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057623.1", "url": "https://www.ensembl.org/id/ENSSSCP00000057623.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102158443", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102158443", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9S1D1-1", "protein_name": "C2H2-type domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFLNGFIHIHYTLCSHLFWSSFTRGTFLNGFIHIHYPLCSHLFWSSFTWGMFLNGFIHIHYTLCSHLFWSSFTRGTFLNGFIHIHYAFCFLLNYLRSLFTIFLFLVMMFLWVTSLFGNKFTVAFSITWTINLTLSTLLLEFVSLYSHGLFLFISEWMKNLESKALIPTQSILEEEQSHSMKLERYIWDDPWFSRLEVLGCKDQLEMYHVNQSTAMRQMVFMQKQILSQRGSEFCELGAGCSQSLNIVPSQKVSQVEHFYKPDVNAESWRCNSAIMYTDKITCENNEYDKAFYQSMQPVHPARVQTGDNLLKCTDTVKSFNHILHFGDHMGMHTGEKLYEYKECHQIFNQSPSFNDPGIHIGGNQYDYKEYENIFYFSSFMEHQKIGTVEKAYKYNEWEKVFGYDSFLTQHTSTYATEKPYEYNECGTSFIWSSYLIQHKKTHTGDKPYECDKCGKVFRNRSALTKHERTHTGIKPYECNKCGKAFSWNSHLIVHKRIHTGEKPYVCNECGKSFNWNSHLIGHQRTHTGEKPFECTECGKSFSWSSHLIAHMRMHTGEKPFKCDECEKAFRDYSALSKHERTHSGAKPYKCTECGKSFSWSSHLIAHQRTHTGEKPYNCQECGKAFRERSALTKHEIIHSGIKPYECNKCGKSCSQMAHLVRHQRTHTGEKPYECNKCGKSFSQSCHLVAHRRIHTGEKPYKCNQCERSFNCSSHLIAHRRTHTGEKPYRCNECGKAFNESSSLIVHLRNHTGEKPYKCNHCEKAFCKNSSLIIHQRMHSGEKRFICNNCGKAFTGHSALLQHQRIHSEEKLCELN", "length": 815 }, "evidence": [ { "id": "F1SC26", "url": "https://omabrowser.org/oma/group/F1SC26/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8WXB4-1", "protein_name": "Zinc finger protein 606", "gene_name": "ZNF606", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAINPWASWGALTDQSWGMTAVDPWASWALCPQYPAWHVEGSLEEGRRATGLPAAQVQEPVTFKDVAVDFTQEEWGQLDLVQRTLYRDVMLETYGHLLSVGNQIAKPEVISLLEQGEEPWSVEQACPQRTCPEWVRNLESKALIPAQSIFEEEQSHGMKLERYIWDDPWFSRLEVLGCKDQLEMYHMNQSTAMRQMVFMQKQVLSQRSSEFCGLGAEFSQNLNFVPSQRVSQIEHFYKPDTHAQSWRCDSAIMYADKVTCENNDYDKTVYQSIQPIYPARIQTGDNLFKCTDAVKSFNHIIHFGDHKGIHTGEKLYEYKECHQIFNQSPSFNEHPRLHVGENQYNYKEYENIFYFSSFMEHQKIGTVEKAYKYNEWEKVFGYDSFLTQHTSTYTAEKPYDYNECGTSFIWSSYLIQHKKTHTGEKPYECDKCGKVFRNRSALTKHERTHTGIKPYECNKCGKAFSWNSHLIVHKRIHTGEKPYVCNECGKSFNWNSHLIGHQRTHTGEKPFECTECGKSFSWSSHLIAHMRMHTGEKPFKCDECEKAFRDYSALSKHERTHSGAKPYKCTECGKSFSWSSHLIAHQRTHTGEKPYNCQECGKAFRERSALTKHEIIHSGIKPYECNKCGKSCSQMAHLVRHQRTHTGEKPYECNKCGKSFSQSCHLVAHRRIHTGEKPYKCNQCERSFNCSSHLIAHRRTHTGEKPYRCNECGKAFNESSSLIVHLRNHTGEKPYKCNHCEKAFCKNSSLIIHQRMHSGEKRFICSECGKAFSGHSALLQHQRNHSEEKLN", "length": 792 }, "evidence": [ { "id": "F1SC26", "url": "https://omabrowser.org/oma/group/F1SC26/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F1SC26", "url": "https://www.uniprot.org/uniprotkb/F1SC26" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 190, "end_pos": 192, "annotation": "n_glycosylation_sequon" }, { "start_pos": 328, "end_pos": 330, "annotation": 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"" }, { "evidence": [ { "id": "F1SC26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC26" }, { "id": "PS50805", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50805" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KRAB", "eco_id": "ECO_0000259", "start_pos": 62, "end_pos": 133, "start_aa": "Val", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 190, "end_pos": 192 }, { "start_pos": 328, "end_pos": 330 }, { "start_pos": 440, "end_pos": 442 }, { "start_pos": 691, "end_pos": 693 }, { "start_pos": 719, "end_pos": 721 }, { "start_pos": 730, "end_pos": 732 }, { "start_pos": 749, "end_pos": 751 } ] }, 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Classification" ] }, { "id": "IPR043136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157993", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157993", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RIGIIYV", "url": "https://omabrowser.org/oma/group/RIGIIYV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SC72", "url": "https://www.orthodb.org/?gene=F1SC72", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12429", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12429", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12429:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12429:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07177", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07177", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07525", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07525", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8951664", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_001926230", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926230", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SC72", "url": "https://www.uniprot.org/uniprotkb/F1SC72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SC72-1", "url": "https://www.uniprot.org/uniprotkb/F1SC72-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAVSNPMELDASLGTARPEPPPTRFHWVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTALDPASLAAVPEFSLPDLVSLGHTWVFAITRHHNRVPRDGQLEAEAVAPSRPAALLVEPYLCIEQFRIPRDRLVGRSRPGLYSHLLDQLYELNVLPPTARRSRLGVLFCPRPDGTADMHIIINGEDMGPSARGLPAAQPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIQRSVVHRLAIDGLHLPKGLKDFCKYE", "length": 285, "header": "tr|F1SC72-1|F1SC72_PIG Isoform 1 of Neuralized E3 ubiquitin protein ligase 2 OS=Sus scrofa OX=9823 GN=NEURL2 PE=4 SV=2 CANONICAL=F1SC72-1" }, "isoforms": [ { "isoform_ac": "F1SC72-1", "url": "https://www.uniprot.org/uniprotkb/F1SC72/entry#F1SC72-1", "sequence": { "sequence": "MAAVSNPMELDASLGTARPEPPPTRFHWVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTALDPASLAAVPEFSLPDLVSLGHTWVFAITRHHNRVPRDGQLEAEAVAPSRPAALLVEPYLCIEQFRIPRDRLVGRSRPGLYSHLLDQLYELNVLPPTARRSRLGVLFCPRPDGTADMHIIINGEDMGPSARGLPAAQPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIQRSVVHRLAIDGLHLPKGLKDFCKYE", "length": 285, "header": "tr|F1SC72-1|F1SC72_PIG Isoform 1 of Neuralized E3 ubiquitin protein ligase 2 OS=Sus scrofa OX=9823 GN=NEURL2 PE=4 SV=2 CANONICAL=F1SC72-1" }, "locus": { "chromosome": "17", "start_pos": 48082099, "end_pos": 48080484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008133.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008133.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007917.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007917.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SC72", "url": "https://www.uniprot.org/uniprotkb/F1SC72" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157993", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157993", "resource": "KEGG Pathway" }, { "id": "R-SSC-8951664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "resource": "Reactome", "description": "Neddylation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YU76-1", "protein_name": "Neuralized E3 ubiquitin protein ligase 2", "gene_name": "NEURL2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPGHSPTRFHRVHGANVRLDASRTRATRVESFANALCFSHEPLAPGQIFLVEIEEKELGWCGHLRVGLTAHDPQSLGAVPEYSLPDLVSLGDSWVFAITRSHNRVSVDGQEEPAPAPAPLWEPELRIDGVRIPRDKLVGRSRPGRYSHLLDELYRTNVLPPTALRSRIGVLYAPRPDGTADMHIVINGEDMGPSARSLPTARPLYAVIDVFASTKSVRVIQVEYGFPSLQTLCRLVIQKHIVHRLAIDGLDLPPMLKHFCQHE", "length": 265 }, "evidence": [ { "id": "F1SC72", "url": "https://omabrowser.org/oma/group/F1SC72/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H8V6-1", "protein_name": "Neuralized-like protein 2", "gene_name": "Neurl2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAASEPVGLGGPRGPARPEPPPTRFHEVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTALDPASLASVPEFSLPDLVSLGQSWVFAITRHHNRVPREGQADAESAAPSRPQALLVEPYLRIQQFRIPRDRLVGRSRPGLYSHLLDQLYEQNVLPPTARRSRLGVLFCPREDGTADMHIVINGEDMGPSARGLPCARPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIQKSVVHRLAIDGLHLPKGLKDFCKYE", "length": 285 }, "evidence": [ { "id": "F1SC72", "url": "https://omabrowser.org/oma/group/F1SC72/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9BR09-1", "protein_name": "Neuralized-like protein 2", "gene_name": "NEURL2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAASEPVDSGALWGLERPEPPPTRFHRVHGANIRVDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTALDPASLAPVPEFSLPDLVNLGHTWVFAITRHHNRVPREGRPEAEAAAPSRPPTLLVEPYLRIEQFRIPRDRLVGRSRPGLYSHLLDQLYELNVLPPTARRSRLGVLFCPRPDGTADMHIIINGEDMGPSARGLPAAQPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIQRSMVHRLAIDGLHLPKELKDFCKYE", "length": 285 }, "evidence": [ { "id": "F1SC72", "url": "https://omabrowser.org/oma/group/F1SC72/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D0S4-1", "protein_name": "Neuralized-like protein 2", "gene_name": "Neurl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADPSEHVGLGGPRSPARPEPPPTRFHQVHGANIRMDPSGTRATRVESFAHGVCFSREPLAPGQVFLVEIEEKELGWCGHLRLGLTALDPASLAAVPEFSLPDLVSLGHSWVFAITRHHNRVPREGQPEAEAAVPSGPQALLVEPYLRIEQFRIPRDRLVGRSRPGLYSHLLDQLYEQNVLPPTARRSRLGVLFCPREDGTADMHIIINGEDMGPSARGLPAAQPLYAVVDVFASTKSVRLVQLEYGLPSLQTLCRLVIHKRVVHRLAIDVLHLPKGLKDFCKYE", "length": 285 }, "evidence": [ { "id": "F1SC72", "url": "https://omabrowser.org/oma/group/F1SC72/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9W112-1", "protein_name": "Neuralized-like protein 2", "gene_name": "Dmel\\CG3894", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEAAEQLDEAAAPAALCAPSRAAYAAAEQEDPDPDQEQDRGRESPIGSLECAPTLSSRKRQLSRFHPYHGSNIQLGDDATVAYRRASFADALTFSERPLAPGDIFLVEIEKIERGWSGHMRLGLTELAPNVIRTSSEGLPHFALPDLANLGNSWIYPISKFEMNQRQDANDIIEPETDDAPHRNLLGDATHVRTPRGLLPKRLLRPAMGNGNDSDILLTDKGSRIGIIYVPTVQSDSKGELHFIINGVDRGPVSRDIPLNRAPLFVVIDVYGTTKQIRIIQLEGILSLQSACRNVILESFAEDAISELPLPESIKRFLLRRD", "length": 322 }, "evidence": [ { "id": "F1SC72", "url": "https://omabrowser.org/oma/group/F1SC72/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F1SC72", "url": "https://www.uniprot.org/uniprotkb/F1SC72" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F1SC72", "url": "https://www.uniprot.org/uniprotkb/F1SC72" } ], "pmid": "" }, { "name": "myofibril assembly", "id": "GO:0030239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030239", "evidence": [ { "database": "UniProtKB", "id": "F1SC72", "url": "https://www.uniprot.org/uniprotkb/F1SC72" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F1SC72", "url": "https://www.uniprot.org/uniprotkb/F1SC72" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SC72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC72" }, { "id": "PS51065", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51065" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NHR", "eco_id": "ECO_0000259", "start_pos": 23, "end_pos": 244, "start_aa": "Pro", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SC72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC72" }, { "id": "PS50225", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50225" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SOCS box", "eco_id": "ECO_0000259", "start_pos": 250, "end_pos": 285, "start_aa": "Ser", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SC74-1", "uniprot_ac": "F1SC74", "uniprot_id": "F1SC74_PIG", "mass": { "chemical_mass": 51167.0, "monoisotopic_mass": 51167.0 }, "refseq": { "ac": "XP_020933681", "name": "zinc finger SWIM domain-containing protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933681" }, "gene_names": [ { "name": "ZSWIM1", "type": "recommended", "evidence": [ { "id": "F1SC74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC74" } ] }, { "name": "ZSWIM1", "type": "synonym", "evidence": [ { "id": "XP_020933681", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933681" } ] } ], "protein_names": [ { "name": "Zinc finger SWIM-type containing 1", "type": "synonym", "evidence": [ { "id": "F1SC74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC74/entry#names_and_taxonomy" } ] }, { "name": "zinc finger SWIM domain-containing protein 1", "type": "synonym", "evidence": [ { "id": "XP_020933681", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933681" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SC74", "url": "https://www.uniprot.org/uniprotkb/F1SC74" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZSWIM1", "url": "https://www.uniprot.org/uniprotkb/F1SC74", "locus": { "chromosome": "17", "start_pos": 48077702, "end_pos": 48074402, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007428", "url": "https://www.ensembl.org/id/ENSSSCG00000007428" } ] } } ], "crossref": [ { "id": "ENSSSCG00000007428", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007428", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518228", "url": "https://www.ncbi.nlm.nih.gov/gene/100518228", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045563", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045563", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048326", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048326", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052579", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052579", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518228", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518228", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CHFSQTF", "url": "https://omabrowser.org/oma/group/CHFSQTF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SC74", "url": "https://www.orthodb.org/?gene=F1SC74", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31569", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31569", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31569:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31569:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04434", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04434", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19286", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19286", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21056", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21056", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21600", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21600", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020933681", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933681", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SC74", "url": "https://www.uniprot.org/uniprotkb/F1SC74", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SC74-1", "url": "https://www.uniprot.org/uniprotkb/F1SC74-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALAMLNELLIEDPSPPLLFYQVSKTAQFDTLHYQSCFMQSVFAHFPEILFVHRTYNPRGKVLYTFLVDGPRVQLEDHLTRAVYFAIPAKEDAEGLAHMFQVFKKFNPAWERVCTILVDPHFLPVPTLAMEFPAAEVLLSAFHICKFLQGKFYQLSLDQPVERALLSSLQSTMCSATAGNLRKLHTLLSTCIPPAQLPELHSHWLLNDRIWLAHRWRSTAESSRYFQGLEVTTCILSQFFGTTPSAEKGLTALLQYMQHNSGDQASFSLGLSPQSDHTPSDVSAESPKVEQLVEARIQHSLHAICTGPAAQLCLGELAVVQKSMHLIGSGSEKVNIQILEDTHRVQPQPPASCSCYFNQAFHLPCRHILAMLSARRQVLQPDMLPAQWTAGCAASLSDILGSAWSETLDKHLAVALLTEEVGQLLQHCSQEEFERRYSTLRELADSWIGPYEQVQL", "length": 456, "header": "tr|F1SC74-1|F1SC74_PIG Isoform 1 of Zinc finger SWIM-type containing 1 OS=Sus scrofa OX=9823 GN=ZSWIM1 PE=4 SV=3 CANONICAL=F1SC74-1" }, "isoforms": [ { "isoform_ac": "F1SC74-1", "url": "https://www.uniprot.org/uniprotkb/F1SC74/entry#F1SC74-1", "sequence": { "sequence": "MALAMLNELLIEDPSPPLLFYQVSKTAQFDTLHYQSCFMQSVFAHFPEILFVHRTYNPRGKVLYTFLVDGPRVQLEDHLTRAVYFAIPAKEDAEGLAHMFQVFKKFNPAWERVCTILVDPHFLPVPTLAMEFPAAEVLLSAFHICKFLQGKFYQLSLDQPVERALLSSLQSTMCSATAGNLRKLHTLLSTCIPPAQLPELHSHWLLNDRIWLAHRWRSTAESSRYFQGLEVTTCILSQFFGTTPSAEKGLTALLQYMQHNSGDQASFSLGLSPQSDHTPSDVSAESPKVEQLVEARIQHSLHAICTGPAAQLCLGELAVVQKSMHLIGSGSEKVNIQILEDTHRVQPQPPASCSCYFNQAFHLPCRHILAMLSARRQVLQPDMLPAQWTAGCAASLSDILGSAWSETLDKHLAVALLTEEVGQLLQHCSQEEFERRYSTLRELADSWIGPYEQVQL", "length": 456, "header": "tr|F1SC74-1|F1SC74_PIG Isoform 1 of Zinc finger SWIM-type containing 1 OS=Sus scrofa OX=9823 GN=ZSWIM1 PE=4 SV=3 CANONICAL=F1SC74-1" }, "locus": { "chromosome": "17", "start_pos": 48076911, "end_pos": 48075544, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008131.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008131.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007915.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007915.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SC74", "url": "https://www.uniprot.org/uniprotkb/F1SC74" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518228", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518228", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4ABM7-1", "protein_name": "Zinc finger, SWIM-type containing 1", "gene_name": "Zswim1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALTMLNGLLIKDSSPPMLHQISKTPQLDAFNYQSCFMQDLFAHFPDVLFIHRTYNPRGKVLYTFLVDGPRVQVEGPLARAVYFAIPTNEDARGLAQMFQVFKKFNPAWERITTILVDPHFLLLPTLTMEFPAAEVLLSAFHICKFLQGKFYQLSLEQPVQSVLLSSLQSTMCSATAGNLRKLYTLLNTCIPPSRLPELHSHWLLNDRIWLAHRWRSRAQSNRYFQTLEVTAHVLSQFFGATPFEKQGMASVFRYMQQNPSDKANLSLVESPQDSQPPSDASPENPNTEQLVEARIQHSLNAICTGPAAQLCLGELAVVQKSMHLIGSGSEKMNIQILEDTHNVQPQSPASCSCYFNQAFHLPCRHILAMLSARQQVLQPDMLQTQWTSGCATSLDSILGSKWSASLDKHLAVTLLTEEVGRLLEHCSKEEFERRYSTLRELADSWIGPYEQVQL", "length": 455 }, "evidence": [ { "id": "F1SC74", "url": "https://omabrowser.org/oma/group/F1SC74/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3H8V8-1", "protein_name": "Zinc finger SWIM domain-containing protein 1", "gene_name": "Zswim1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALTMLNGLLIEDSSPPTLLHQISKTPQLDTFTHQSCFMQDLFAHFPEVLFIHRTYNPRGKVLYTFLVDGPRVQLEGPLARAVFFAIPTNEDAKGLAQMFQVFKKFNPAWERVCTILVDPHFLLLPTLTMEFPTAEVLLSAFHICKFLQGKFYQLSLEKQVQSVLLSSLQSTMCSATAGNLRKLYTLLSNCIPSTRLPELHSHWLLNDRIWLAHRWRSRAQSTRYFRSLEITAHLLSQFFGTTPFEKQGMASVFRYMQQNPSDKASLNLAVSPKDSHTPSDASLESPSTEQVVEARIQHSLNAICTGPAAQLCLGELAVVQKSMHLIGSGSEKVNIQILEDTHNVQPQPPASCSCYFNQAFHLPCRHILAMLSARHQVLQPDMLQAQWTSGCATSLDSILGSKWSATLDKHLAVTLLTEEVGRLLQHCSKEEFERRYSTLRELADSWIGPYEQVQL", "length": 456 }, "evidence": [ { "id": "F1SC74", "url": "https://omabrowser.org/oma/group/F1SC74/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9BR11-1", "protein_name": "Zinc finger SWIM domain-containing protein 1", "gene_name": "ZSWIM1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLERLKAPWSAALQRKYFDLGIWTAPISPMALTMLNGLLIKDSSPPMLLHQVNKTAQLDTFNYQSCFMQSVFDHFPEILFIHRTYNPRGKVLYTFLVDGPRVQLEGHLARAVYFAIPAKEDTEGLAQMFQVFKKFNPAWERVCTILVDPHFLPLPILAMEFPTAEVLLSAFHICKFLQAKFYQLSLERPVERLLLTSLQSTMCSATAGNLRKLYTLLSNCIPPAKLPELHSHWLLNDRIWLAHRWRSRAESSHYFQSLEVTTHILSQFFGTTPSEKQGMASLFRYMQQNSADKANFNQGLCAQNNHAPSDTIPESPKLEQLVESHIQHSLNAICTGPAAQLCLGELAVVQKSTHLIGSGSEKMNIQILEDTHKVQPQPPASCSCYFNQAFHLPCRHILAMLSARRQVLQPDMLPAQWTAGCATSLDSILGSKWSETLDKHLAVTHLTEEVGQLLQHCTKEEFERRYSTLRELADSWIGPYEQVQL", "length": 485 }, "evidence": [ { "id": "F1SC74", "url": "https://omabrowser.org/oma/group/F1SC74/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CWV7-1", "protein_name": "Zinc finger SWIM domain-containing protein 1", "gene_name": "Zswim1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALTMLNGLLIKDSSPPMLHQISKTPQLDAFNYQSCFMQDLFAHFPEVLFIHRTYNPRGKVLYTFLVDGPRVQVEGPLARAVYFAIPTNEDARGLAQMFQVFKKFNPAWERVNTILVDPHFLLLPTLTMEFPTAEVLLSAFHICKFLQGKFYQLPLEQPVQRLLLSSLQSTMCSATAGNLRKLYTLLNNCIPSSRLPELHSHWLLNDRIWLAHRWRSRAQSSRYFQSLEIMAHILSQFFGTTPFEKQGMASVFRYMQQNSSDKASLSLAETPQDSHTPSEASAENPNTEQLVEARIQHSLNAICTGPAAQLCLGELAVVQKSMHLIGSGSEKMSIQILEDTHTVQPQPPASCSCYFNQAFHLPCRHILAMLSARQQVLQPDMLPAQWTSGCASSLDSILGSKWSASLDKHLAVTLLTEEVGRLLQHCSEEEFERRYSTLRELADNWIGPYEQVQL", "length": 455 }, "evidence": [ { "id": "F1SC74", "url": "https://omabrowser.org/oma/group/F1SC74/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SC74", "url": "https://www.uniprot.org/uniprotkb/F1SC74" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SC74", "url": "https://www.uniprot.org/uniprotkb/F1SC74" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SC74", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC74" }, { "id": "PS50966", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50966" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SWIM-type", "eco_id": "ECO_0000259", "start_pos": 334, "end_pos": 376, "start_aa": "Val", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SC75-1", "uniprot_ac": "F1SC75", "uniprot_id": "F1SC75_PIG", "mass": { "chemical_mass": 78657.0, "monoisotopic_mass": 78657.0 }, "refseq": { "ac": "XP_013840858", "name": "zinc finger SWIM domain-containing protein 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840858" }, "gene_names": [ { "name": "ZSWIM3", "type": "recommended", "evidence": [ { "id": "F1SC75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC75" } ] }, { "name": "ZSWIM3", "type": "synonym", "evidence": [ { "id": "XP_013840858", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840858" } ] } ], "protein_names": [ { "name": "Zinc finger SWIM-type containing 3", "type": "synonym", "evidence": [ { "id": "F1SC75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC75/entry#names_and_taxonomy" } ] }, { "name": "zinc finger SWIM domain-containing protein 3", "type": "synonym", "evidence": [ { "id": "XP_013840858", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840858" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SC75", "url": "https://www.uniprot.org/uniprotkb/F1SC75" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZSWIM3", "url": "https://www.uniprot.org/uniprotkb/F1SC75", "locus": { "chromosome": "17", "start_pos": 48073095, "end_pos": 48054482, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007427", "url": "https://www.ensembl.org/id/ENSSSCG00000007427" } ] } } ], "crossref": [ { "id": "ENSSSCG00000007427", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007427", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100152744", "url": "https://www.ncbi.nlm.nih.gov/gene/100152744", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007527", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007527", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045563", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045563", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048325", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048325", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048326", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048326", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052579", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052579", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152744", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152744", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LNTQHVH", "url": "https://omabrowser.org/oma/group/LNTQHVH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SC75", "url": "https://www.orthodb.org/?gene=F1SC75", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31569", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31569", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31569:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31569:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04434", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04434", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19286", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19286", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21056", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21056", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21599", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21599", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21600", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21600", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013840858", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840858", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SC75", "url": "https://www.uniprot.org/uniprotkb/F1SC75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SC75-1", "url": "https://www.uniprot.org/uniprotkb/F1SC75-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELGSCFKTYEDFKECFSAYKKENRCSFILRDCVSVRFHNLNHGTSIREDILYVQVKFVCIRTQSNSRKRTAEADMCPAYLLLQYNEKLDRLCVSELNTQHIHVNSKTTGPKGAATGKSQKTACQQKPQPAQPAIKTDLGTAEKSPVEPSFCSDKVQAPSEPEQEGLTPSDLAKIAKVMRNFLKVDVGSMASFSVGSSQDLDRLSFQSSKMSDLFIRFPENLLLHRVENAQGHILYAFLVESKEREGRVVHFAVLRAETATSVAKMLSIFTEFNSDWPKVKVVFVDPSFPHRAILQEIFPAARILLSIYHTTRLLEKKLHRSSADPSFKRLMKEALREAVFVTSEASLQNLCHMSQALLDEQLFSFLQAHWFSCELLWYMHVRKGLHACNTYMDSLDVVTSKVSSLFREQQSLLDCILRFVDYIDFFNTKGLKNLPTAPPKLKRARSASMTPKSKKAFGTCWGSLSRLPGQEAKLEPQQVQVPQQQPQGQPSHGGMLDSLRQSGSDLAYKLCHNEWAVVQNSTHLVDVAGSSVDVQLLEDSHQVSKDGCSCSCSFQQWYHLPCRHILALLHTSQKPVGETMVCRRWQKRYQHLLGPSGELQDPFVIPNTGQPGKQGRNNMIQDLSRELANLLMQSEGPELEERCSTLRKIVDIWAAPCQVSEPSQQPGDFKDVGRLPFLWGKQEEGEGLTPAGVTIHN", "length": 698, "header": "tr|F1SC75-1|F1SC75_PIG Isoform 1 of Zinc finger SWIM-type containing 3 OS=Sus scrofa OX=9823 GN=ZSWIM3 PE=4 SV=1 CANONICAL=F1SC75-1" }, "isoforms": [ { "isoform_ac": "F1SC75-1", "url": "https://www.uniprot.org/uniprotkb/F1SC75/entry#F1SC75-1", "sequence": { "sequence": "MELGSCFKTYEDFKECFSAYKKENRCSFILRDCVSVRFHNLNHGTSIREDILYVQVKFVCIRTQSNSRKRTAEADMCPAYLLLQYNEKLDRLCVSELNTQHIHVNSKTTGPKGAATGKSQKTACQQKPQPAQPAIKTDLGTAEKSPVEPSFCSDKVQAPSEPEQEGLTPSDLAKIAKVMRNFLKVDVGSMASFSVGSSQDLDRLSFQSSKMSDLFIRFPENLLLHRVENAQGHILYAFLVESKEREGRVVHFAVLRAETATSVAKMLSIFTEFNSDWPKVKVVFVDPSFPHRAILQEIFPAARILLSIYHTTRLLEKKLHRSSADPSFKRLMKEALREAVFVTSEASLQNLCHMSQALLDEQLFSFLQAHWFSCELLWYMHVRKGLHACNTYMDSLDVVTSKVSSLFREQQSLLDCILRFVDYIDFFNTKGLKNLPTAPPKLKRARSASMTPKSKKAFGTCWGSLSRLPGQEAKLEPQQVQVPQQQPQGQPSHGGMLDSLRQSGSDLAYKLCHNEWAVVQNSTHLVDVAGSSVDVQLLEDSHQVSKDGCSCSCSFQQWYHLPCRHILALLHTSQKPVGETMVCRRWQKRYQHLLGPSGELQDPFVIPNTGQPGKQGRNNMIQDLSRELANLLMQSEGPELEERCSTLRKIVDIWAAPCQVSEPSQQPGDFKDVGRLPFLWGKQEEGEGLTPAGVTIHN", "length": 698, "header": "tr|F1SC75-1|F1SC75_PIG Isoform 1 of Zinc finger SWIM-type containing 3 OS=Sus scrofa OX=9823 GN=ZSWIM3 PE=4 SV=1 CANONICAL=F1SC75-1" }, "locus": { "chromosome": "17", "start_pos": 48072627, "end_pos": 48054712, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008130.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008130.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007914.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007914.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SC75", "url": "https://www.uniprot.org/uniprotkb/F1SC75" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152744", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152744", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4AC07-1", "protein_name": "Zinc finger, SWIM-type containing 3", "gene_name": "Zswim3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGSCFKTYEDFKECFSAYKKETRCSFIVRDCVSVRFHNLNNGTSFREDILYVQVKFVCIRTQSNRKKTRKVDRCPAYLLLQYNERLDRLFISELNTQHIHADSSAAAGGVPASKPQKALCLHELQPVQLSIKKDLDTAEKPPVEPSFCLDKIHKPSNPEQEGISPSDMAKIAKVMKNFLTVDEGSMASFSVGTSQDLDRLSFQSSKMSDLFTRFPETLLLHRVENSQGHILYAFLVENKERESRVVHFAVLKAETAPSVAKMLNIFTEFNSDWPKVKVVFVDPSFPHRAILQEIFPAARTLLSIYHTTRLLEKKLHQSSVNASFKRLMKEALREAVFVSSDASLKNLCEMSQALLDEELFSFLQAHWFSCELLWYMHVRKGLHACNTYMDSLDIVTSKVSSLFREQRSLLDCILHFVDYIDFFNTKGLKSLPTNSPKLKRTRLPSTPPRPKKPFRICGGSATRLPVEEVEETKPDSAQSKSPQPQDQSSKGGMLDILHQSGSELAYKLCHNEWEVVQNSTHLVDEAGASVAVQLLENSHQVSKDGCSCSCSFQQCYHLPCRHILALLHTSQQPVGEAMVCCRWQKKYQHLLDPNGELQDRGIIPNTDEPEKQGQNHKIRDLSRELANLLMQTEGPELEERCSTLRKIVDIWADPYQRPESSQQQPVDFRDAGCLPFLWGKLETGDSPPPAEAMVHD", "length": 698 }, "evidence": [ { "id": "F1SC75", "url": "https://omabrowser.org/oma/group/F1SC75/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MTI1-1", "protein_name": "Zinc finger SWIM-type containing 3", "gene_name": "ZSWIM3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MELGSCFKTYEDFKECFSAYKKENKCSFILRDCISVRYHNLNHGTSIREDILYVQVKFVCIRTQSNRKRAAEADMCPAYLLLRYNEKLDRLFISELNTQHIHIDPKTTGPRGDATGKSQKKLLSAQPAVNKDLGTAAKSPVEPLFCLDEVQIPAKPEQEDIAPSDLAKIAKVMKNFLKVDVGSMASFSVGSSQDLDRLSFQSSKMSDLFVRFPENLLLHRVENAQGHILYAFLVESKEREGRVVHFAVLKAETATSVAKMLSIFTEFNSDWPKVKVVFVDPSFPHRAILQEVFPGARTLLSVYHTTRLLEKKLHRSSADPSFKRLMKEALREAVFVTSETSLQNLCQMSRTLLDEQLFSFLQAHWFSCELLWYMHVRKGLHACSTYMDSLDVVTSKVSSLFREQQSLLDCILHFVDYIDFFNTKGVKNFPTAPPKLKRARSANTAPKSKKPSGICGGSLSRPPVQEAKPEQVRGPPRQPPQGQPLQGGMLASLRQSGSDLAYKLCHNEWVVVQSSTHLVDVAGCAVDVQLLEDSHQVSKDGCSCSCYFQQRYHLPCRHILALLHTSQRPVSEAMVCRRWQKRYQHLLGPCGELRDPILIPADAGQPGEPGRNDMIQDLSRELANLLMQSEGPELEERCSTLRKIVDIWAAPRQPPEPSHQPRDFRDVGCLPFLWGKQEEGEGLAPAGTTIHG", "length": 692 }, "evidence": [ { "id": "F1SC75", "url": "https://omabrowser.org/oma/group/F1SC75/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3H8V9-1", "protein_name": "Zinc finger SWIM domain-containing protein 3 isoform X1", "gene_name": "Zswim3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MELGSCFKTYEDFKECFSAYKKETRCSFIVRDCVSVRFHNLNHGTSFREDILYVQVKFVCIRTQSNRKRTRKVDRCPAYLLLQYSETLDRLFISELNTQHIHVDSNAAGGSPASKLQKALCLHKLQPVQLSIKKDLDAEEKPLVEPSSFCLEKTHLASPPEQKGISPSDLAKIAKVMKNFLTVDEGSMASFSVGTSQDLDRLSFQSSKMSDLFTRFPENLLLHRVENSQGHILYAFLVENKERESRVVHFAVLKAETATSVAKMLNIFTEFNSDWSKVKVVFVDPSFPHQAILQEIFPAARILLSIYHTTRLLEKKLHQSSANASFKRLMKEALREAVFVSSDASLKNLCQMSQALLDEELFRFLQAHWFSCELLWYMHVRKGLHACNTYMDSLDIVTSKVSGLFREQQSLLDCILHFVDYIDFFNTKGLKSLPKNSPKLKRTQLPSMPPRPKKPFRTCRGNVTRLPVEETKSDSQESQLLQPQDQSCKSGMLDILHQSGSELAYKLCHNEWEVVQNSTHLVDVAGSSVAVKLLEDSHQVSKDGCSCSCSFQQCYHLPCRHILALLHTSQQPVGEAMVCCRWQKKYQHLLGPNGELQDRGIIPNSDQPEKQGQNHMIQDLSRELANLLMQTEGPELEERCSTLRKIVDIWADPLQLPESSQQPVDFNDVGCLPFLWGQLEEGDSFPLAEAMAHE", "length": 694 }, "evidence": [ { "id": "F1SC75", "url": "https://omabrowser.org/oma/group/F1SC75/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8CFL8-1", "protein_name": "Zinc finger SWIM domain-containing protein 3", "gene_name": "Zswim3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MELGSCFKTYEDFKECFSAYKKETRCSFIVRDCISVRFHNLNNGTSFREDILYVQVKFVCIRTQSNRKKTRKVDRCPAYLLLQYNETLDRLFISELNTQHIHADSNASGGIPASKPQAICLHKLPPVQLSIRKDLDTAEKPSVEPSFCLDKIHKPSNPEQEGISPSDMAKIAKVMKNFLTVDEGSMASFSVGTSQDLDRLSFQSSKMSDLFARFPETLLLHRVENSQGHILYAFLVENKERESRVVHFAVLKAETAPSVAKMLNIFTEFNSDWPKVKMVFVDPSFPHRAILQEIFPSARTLLSIYHTTRLLEKKLHQSSVNASFKRLMKEALREAVFVSSDASLKNLCEMSQVLLDEELFSFLQAHWFSCELLWYIHVRKGLHACNTYMDSLDIVTSKVSSLFREQRSLLDCILHFVDYIDFFNTKGLKSLPTNAPKLRRTRLPSTPPRPKKPFRICGGGDTRLPVEEVEETKADSAQSQLPQPQDQSSKAGMLDILHQSGSELAYKLCHNEWEVVQNSTHLVDEAGSSVAVQLLENSHQVSKDGCSCSCSFQQCYHLPCRHILALLHTSQQPVGEAMVCCRWQKKYQHLLDPNGELQDRGIIPNTDQPEKQGQNHMIRDLSRELANLLMQTEGPELEERCSTLRKIVDIWADPYQLPESSQQPVDFRDVGCLPFLWGKLEEADSPPLAEAMVHD", "length": 695 }, "evidence": [ { "id": "F1SC75", "url": "https://omabrowser.org/oma/group/F1SC75/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96MP5-1", "protein_name": "Zinc finger SWIM domain-containing protein 3", "gene_name": "ZSWIM3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MELGSCFKTYEDFKECFSAYKRENRCSFILRDCVSVRFHNLNHGTSIREDILYVQVKFVCIRTQSNRKRTREADMCPAYLLLRYNERLDRLFISELNTQHIHGDSKVASPGGDTTGKSQKTMCLQRLQPVQPTTKKDLDTAEKSLVEPSFCLDKVQVSSKPEQEGITPSDLAKIAKVMKNFLKVDEGSMASFSVGDSQHLDRLSFQSSKMTDLFIRFPENLLLHRVENTQGHILYAFLVENKERESRVVHFAVLKAETVTSVAKMLSIFTEFNSDWPKVKVVFVDPSFHYRAILQEIFPAARILLSIYHTTRLLEKKLHRSSANPSFKRLMKEALREAVFVTSEASLKNLCQMSQAVLDEDLFNFLQAHWFTCELLWYMHVRKGLLACNTYMDSLDIVTSKVSSLFREQQSLLDCILCFVDYIDFFNTKGLKNLPTPPPKLKRARPASMPLKSKKAFGICGESLTSLPAEETKPDAQQVQVQQQSQVPPSQVGMLDTLHQSGSELAYKLCHNEWEVVQNSTHLVDMAGSSVDVQLLEDSHQVSKDGCSCSCSFQQWYHLPCRHILALLHTSQQPVGEAMVCRRWQKKYQYLLGPNGELQDRGMVPNTGQPEKQGRNDMIQDLSRELANLLMQTEGPELEERYSTLRKIVDIWAGPSQPSELFQQPGDFKDVGRLPFLWGKQEEGEGFPPATAVMHY", "length": 696 }, "evidence": [ { "id": "F1SC75", "url": "https://omabrowser.org/oma/group/F1SC75/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SC75", "url": "https://www.uniprot.org/uniprotkb/F1SC75" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 521, "end_pos": 523, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SC75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC75" }, { "id": "PS50966", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50966" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SWIM-type", "eco_id": "ECO_0000259", "start_pos": 533, "end_pos": 574, "start_aa": "Val", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 521, "end_pos": 523 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SC88-1", "uniprot_ac": "F1SC88", "uniprot_id": "F1SC88_PIG", "mass": { "chemical_mass": 9944.0, "monoisotopic_mass": 9944.0 }, "refseq": {}, "gene_names": [ { "name": "WFDC3", "type": "recommended", "evidence": [ { "id": "F1SC88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC88" } ] } ], "protein_names": [ { "name": "WAP four-disulfide core domain 3", "type": "synonym", "evidence": [ { "id": "F1SC88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SC88/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SC88", "url": "https://www.uniprot.org/uniprotkb/F1SC88" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "WFDC3", "url": "https://www.uniprot.org/uniprotkb/F1SC88", "locus": {} } ], "crossref": [ { "id": "F1SC88", "url": "https://alphafold.ebi.ac.uk/entry/F1SC88", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007421", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007421", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR008197", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008197", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036645", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036645", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PF00095", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00095", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SC88", "url": "https://www.uniprot.org/uniprotkb/F1SC88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SC88-1", "url": "https://www.uniprot.org/uniprotkb/F1SC88-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "IMSSCLFLLKALLALPSMASWVTAGEHGRGGDCPNILVGPCIVSCWVDENCQAGEKCCKSGCSRFCVLSVLLTQLAPNPNGTVRSDSEFEIPVP", "length": 94, "header": "tr|F1SC88-1|F1SC88_PIG Isoform 1 of WAP four-disulfide core domain 3 OS=Sus scrofa OX=9823 GN=WFDC3 PE=4 SV=4 CANONICAL=F1SC88-1" }, "isoforms": [ { "isoform_ac": "F1SC88-1", "url": "https://www.uniprot.org/uniprotkb/F1SC88/entry#F1SC88-1", "sequence": { "sequence": "IMSSCLFLLKALLALPSMASWVTAGEHGRGGDCPNILVGPCIVSCWVDENCQAGEKCCKSGCSRFCVLSVLLTQLAPNPNGTVRSDSEFEIPVP", "length": 94, "header": "tr|F1SC88-1|F1SC88_PIG Isoform 1 of WAP four-disulfide core domain 3 OS=Sus scrofa OX=9823 GN=WFDC3 PE=4 SV=4 CANONICAL=F1SC88-1" }, "locus": { "chromosome": "17", "start_pos": 47992152, "end_pos": 47976280, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008124.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008124.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007908.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007908.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SC88", "url": "https://www.uniprot.org/uniprotkb/F1SC88" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F1SC88", "url": "https://www.uniprot.org/uniprotkb/F1SC88" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "peptidase inhibitor activity", "id": "GO:0030414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030414", "evidence": [ { "database": 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"url": "https://www.ensembl.org/id/ENSSSCP00000014422.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 83, "start_aa": "Thr", "end_pos": 83, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr83", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng 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"tr|F1SCJ9-1|F1SCJ9_PIG Isoform 1 of Transmembrane and coiled-coil domain-containing protein 5B OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F1SCJ9-1" }, "isoforms": [ { "isoform_ac": "F1SCJ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SCJ9/entry#F1SCJ9-1", "sequence": { "sequence": "MEEVGQDPLDDVQEMMEIPKLEVTKQNLDYLNSDLEKDLQRLDEANQVLIKKIQEREETIQSLEREINLSAGQARESEELNNITSETEEALRDLELETANVFIIWGMAFQISRRFKNVGLDKEALKQMLAELKVKLQKSTESCANQEKELVKIESDYQSVYQLCEDQAHYIKKYQEILRQMEKEKEVLLLEKEVIKAQNNSSQTVKPGSILVETIQSNMEKTIIKKQKRIFWYRHFRCLVFMVMIFMKLLGYVLFYLQYIHPDLLVDALPLVMSRDTLKRLRDILFPFLTLEVEEVLPH", "length": 299, "header": "tr|F1SCJ9-1|F1SCJ9_PIG Isoform 1 of Transmembrane and coiled-coil domain-containing protein 5B OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F1SCJ9-1" }, "locus": { "chromosome": "7", "start_pos": 81270125, "end_pos": 81258530, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002507.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002507.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002445.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002445.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCJ9", "url": "https://www.uniprot.org/uniprotkb/F1SCJ9" } ], "reference": [ { "type": 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"MDLDLRLSFQGEPSRNDPGSENLALKASQGYVIRDGEGISEFPNTRLSLFQNSSNSFARRELQRLYNLFHSWLQPEKRSKDEMISCLVLEQFVINGHCSDRSTLQEKWNASGRNLEKFMEDLTDDGMKQPGFVHVHMQGQEALFSENMPLREVLVHFRKHLATATPRGENTKAPLWTPRDASLETGQESEGKECGGNTSRKTCPVTESLTWQGSQTPFLLIIPEETCPGLEEAGVSPENPLGSRTAEPGLAVSQEGSPEGPFGGDVHLEAEPGFLSRPDQVTLEPVSAHPSLEGNPARGKSPEGLPGAQKVFPCEKCSQVFRYLSRLKVHQRRHNDERPFVCAKCKKGFFQTSDLRVHQRIHTKEKPFRCSTCKRPFSHKTNLRAHERIHTGEKPYLCSLCQRRYRQSSTYNRHLKSHQKLALKGDLSGVPVVAQRKRI", "length": 439, "header": "tr|F1SCQ2-1|F1SCQ2_PIG Isoform 1 of Zinc finger and SCAN domain-containing protein 4 OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=F1SCQ2-1" }, "isoforms": [ { "isoform_ac": "F1SCQ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ2/entry#F1SCQ2-1", "sequence": { "sequence": 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"phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ2", "url": "https://www.uniprot.org/uniprotkb/F1SCQ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": 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"organism": "Bos taurus", "sequence": { "sequence": "MSSDLRISFEGEPSRRGPGPENSPTQGSAIQEEEGIPEFPSTQLNLLRDSNNLSARHELQRLYHLFHSWLQPEKHSKDEIISHLVLEQFMISGNCSDRSTLQEKWKASGRNLEKLMEDLTDDGMEVPGLVHVHMQGREALFCENMPLRQVIIHLTKQLPAGTPTRENAGTLSWTPQDTSLETGQRNEGKENDGNISVKSDSITSPSNQIPSLIIVQEENHLRLEEGGVSLENPRNSRRGAGPGPSRPQDGSLKGPSSQDVLMEVERDQVTPEPVSTLQSSEGTSARGEPQERSLRAPEVYRCERCPKTFRYSSRFRVHQKRHNNERTYICAECGKGFFQASDLHVHQRIHTGEKPFVCSTCEMAFTHKTNLRTHERTHTGEKPYECSLCQRRFRQSSTYHRHRRFHQKATLKSSTLNAAL", "length": 420 }, "evidence": [ { "id": "F1SCQ2", "url": "https://omabrowser.org/oma/group/F1SCQ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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] }, { "id": "F1SCQ5-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTLAMAEGAWMGPGCWHGVENEEATSEQSVSVGVLHVRTSKVDSLTQVTYTCDLCGPILKDILHLDEHQETCHGVKSYTCGACGRQFWFSANFDQHQKPYIMEKLLREDKSKTSFVKNCRVCQEPHLLEKLFACKEEQKDFQDSLGSHQQKATHSKRKTRSTESGETFHIGQMDYKCSECGKAFSRKDTLVQHQRIHTGERPYECNECGKAFSRKATLIQHQRIHTGERPYECSECGKAFSRKDNLTQHKRIHTGEMPYKCHECGKHFSHHSNLIVHQRVHNGARPYKCNNCGKVFRHKSTLVQHESIHTGENPYVCSDCGKSFGHKYTLIKHQRIHTETRPFECVECGKFFSRSSDFIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQKVHTGERPYECNECGKSYSLSSHLIRHQKVHTAGRL", "length": 426, "header": "tr|F1SCQ5-1|F1SCQ5_PIG Isoform 1 of Zinc finger protein 134 OS=Sus scrofa OX=9823 GN=ZNF134 PE=1 SV=2 CANONICAL=F1SCQ5-1" }, "isoforms": [ { "isoform_ac": "F1SCQ5-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ5/entry#F1SCQ5-1", "sequence": { "sequence": "MTLAMAEGAWMGPGCWHGVENEEATSEQSVSVGVLHVRTSKVDSLTQVTYTCDLCGPILKDILHLDEHQETCHGVKSYTCGACGRQFWFSANFDQHQKPYIMEKLLREDKSKTSFVKNCRVCQEPHLLEKLFACKEEQKDFQDSLGSHQQKATHSKRKTRSTESGETFHIGQMDYKCSECGKAFSRKDTLVQHQRIHTGERPYECNECGKAFSRKATLIQHQRIHTGERPYECSECGKAFSRKDNLTQHKRIHTGEMPYKCHECGKHFSHHSNLIVHQRVHNGARPYKCNNCGKVFRHKSTLVQHESIHTGENPYVCSDCGKSFGHKYTLIKHQRIHTETRPFECVECGKFFSRSSDFIAHQRVHTGERPFVCSKCGKDFIRTSHLVRHQKVHTGERPYECNECGKSYSLSSHLIRHQKVHTAGRL", "length": 426, "header": "tr|F1SCQ5-1|F1SCQ5_PIG Isoform 1 of Zinc finger protein 134 OS=Sus scrofa OX=9823 GN=ZNF134 PE=1 SV=2 CANONICAL=F1SCQ5-1" }, "locus": { "chromosome": "6", "start_pos": 62121217, "end_pos": 62118532, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004406.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004406.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004305.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004305.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": 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] }, { "uniprot_canonical_ac": "F1SCQ8-1", "uniprot_ac": "F1SCQ8", "uniprot_id": "F1SCQ8_PIG", "mass": { "chemical_mass": 41790.0, "monoisotopic_mass": 41790.0 }, "refseq": { "ac": "XP_003128160", "name": "exonuclease V", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128160" }, "gene_names": [ { "name": "EXO5", "type": "recommended", "evidence": [ { "id": "F1SCQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ] }, { "name": "EXO5", "type": "synonym", "evidence": [ { "id": "XP_003128160", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128160" } ] } ], "protein_names": [ { "name": "Exonuclease V", "type": "recommended", "evidence": [ { "id": "F1SCQ8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8/entry#names_and_taxonomy" } ] }, { "name": "Defects in morphology protein 1 homolog", "type": "synonym", "evidence": [ { "id": "F1SCQ8", "database": "UniProtKB", "url": 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Probably involved in DNA repair following ultraviolet (UV) irradiation and interstrand cross-links (ICLs) damage. Has both 5'-3' and 3'-5' exonuclease activities with a strong preference for 5'-ends. Acts as a sliding exonuclease that loads at ssDNA ends and then slides along the ssDNA prior to cutting; however the sliding and the 3'-5' exonuclease activities are abolished upon binding to the replication protein A (RPA) complex that enforces 5'-directionality activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A8W4FAV5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAV5#function" }, { "database": "UniProtKB", "id": "ARBA00055450", "url": "https://www.uniprot.org/uniprotkb/ARBA00055450#function" }, { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EXO5", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8", "locus": { "chromosome": "6", "start_pos": 170651060, "end_pos": 170657050, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003980", "url": "https://www.ensembl.org/id/ENSSSCG00000003980" } ] } } ], "crossref": [ { "id": "F1SCQ8", "url": "https://alphafold.ebi.ac.uk/entry/F1SCQ8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003980", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003980", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511388", "url": "https://www.ncbi.nlm.nih.gov/gene/100511388", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011604", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011604", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019190", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019190", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511388", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511388", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CPDKPLG", "url": "https://omabrowser.org/oma/group/CPDKPLG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SCQ8", "url": "https://www.orthodb.org/?gene=F1SCQ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14464", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14464", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14464:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14464:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09810", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09810", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003128160", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128160", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FAV5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAV5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAV5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAV5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCQ8-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAETGEEETVSAEASGFSDLSDSEFLDLEDTQESSMSLSEPGPSSALSEKHGNLISLPTWKGGLDVSSPMERFHLKYLYVTDLCTQNWCEQQMVYEKELPGFLTPEKSAVLDTGASIHLARELEVHDLVTVPVTTKEDAWAIKFLNILSMIPTLQSEGRIREFPVFGEVEGVFLVGVIDELHYTARGELELAELKTRRRPVLPMNAQKNKDRFQVNLYKYIFDAMVQGKVTTASLIYHTKLHPEKPLGPSVLRHARQGGFSVKSLGDLMELVYLTLTLSDLPVIDSLKIEYIHQETATVLGTEIVAFEEKEVRRKVQHYLAYWMGHREPQGVDVEEAWKCRACNYADICEWRKGSRLPNSVLEPQVKIAK", "length": 370, "header": "tr|F1SCQ8-1|F1SCQ8_PIG Isoform 1 of Exonuclease V OS=Sus scrofa OX=9823 GN=EXO5 PE=3 SV=1 CANONICAL=F1SCQ8-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FAV5-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8/entry#A0A8W4FAV5-1", "sequence": { "sequence": "MQGLCSIQSCAMAETGEEETVSAEASGFSDLSDSEFLDLEDTQESSMSLSEPGPSSALSEKHGNLISLPTWKGGLDVSSPMERFHLKYLYVTDLCTQNWCEQQMVYEKELPGFLTPEKSAVLDTGASIHLARELEVHDLVTVPVTTKEDAWAIKFLNILSMIPTLQSEGRIREFPVFGEVEGVFLVGVIDELHYTARGELELAELKTRRRPVLPMNAQKNKDRFQVNLYKYIFDAMVQGKVTTASLIYHTKLHPEKPLGPSVLRHARQGGFSVKSLGDLMELVYLTLTLSDLPVIDSLKIEYIHQETATVLGTEIVAFEEKEVRRKVQHYLAYWMGHREPQGVDVEEAWKCRACNYADICEWRKGSRLPNSVLEPQVKIAK", "length": 381, "header": "tr|A0A8W4FAV5-1|A0A8W4FAV5_PIG Computationally mapped isoform of Exonuclease V OS=Sus scrofa OX=9823 GN=EXO5 PE=3 SV=1 CANONICAL=F1SCQ8-1" }, "locus": { "chromosome": "6", "start_pos": 170652737, "end_pos": 170651595, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097940.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097940.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075423.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075423.1" } ] } }, { "isoform_ac": "F1SCQ8-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8/entry#F1SCQ8-1", "sequence": { "sequence": "MAETGEEETVSAEASGFSDLSDSEFLDLEDTQESSMSLSEPGPSSALSEKHGNLISLPTWKGGLDVSSPMERFHLKYLYVTDLCTQNWCEQQMVYEKELPGFLTPEKSAVLDTGASIHLARELEVHDLVTVPVTTKEDAWAIKFLNILSMIPTLQSEGRIREFPVFGEVEGVFLVGVIDELHYTARGELELAELKTRRRPVLPMNAQKNKDRFQVNLYKYIFDAMVQGKVTTASLIYHTKLHPEKPLGPSVLRHARQGGFSVKSLGDLMELVYLTLTLSDLPVIDSLKIEYIHQETATVLGTEIVAFEEKEVRRKVQHYLAYWMGHREPQGVDVEEAWKCRACNYADICEWRKGSRLPNSVLEPQVKIAK", "length": 370, "header": "tr|F1SCQ8-1|F1SCQ8_PIG Isoform 1 of Exonuclease V OS=Sus scrofa OX=9823 GN=EXO5 PE=3 SV=1 CANONICAL=F1SCQ8-1" }, "locus": { "chromosome": "6", "start_pos": 170652704, "end_pos": 170651595, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022407.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022407.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022746.1", "url": "https://www.ensembl.org/id/ENSSSCP00000022746.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511388", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511388", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A2VDX7-1", "protein_name": "Exonuclease V", "gene_name": "EXO5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAETEEEETVSEEASGFSDLSDSELLDLEDTQESSASASKPGPSYELPGKDDKLIRSPKWKRRLDVSSPMERFHLKYLYVTDLSTQNWCEQQMVYGKEFSGFLTPEKSAILDTGASIHLARELEVHDLVSIPITSKEDAWAVKFLNILSMIPTLQSEGRIREFPVFAEVEGVLLVGVIDELHYTASGELELTELKTRGNPVLPSDAQKKKDYFQVSLYKYIFDAMVQGKVTAASLIHHTKLDPEKPLGPSVLRHAQQGGYSVKSLGDLIELVFLSLTLSDLPLIDSLKIEYVHQGTATVLGTEMVAFAEKEVRSKVQHYMTYWMGHREPQGVDVEEAWKCRMCNYADICEWKKSGGLISATLEPQVKKAK", "length": 370 }, "evidence": [ { "id": "F1SCQ8", "url": "https://omabrowser.org/oma/group/F1SCQ8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZLE0-1", "protein_name": "Exonuclease V", "gene_name": "Exo5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAETGEEETASAEASGFSDISDSELVEFLDLEDAKESAVSLSKPGPSSELPGKDDKPVSLQNCKRGLDVLSPMDRFHLKYLYVTDLCTQDWCELQMVYGKELPGSLTPEKAAVLDIGASIHLAKELELHDLVTVPTTTKEDAWAVKFLNILSMVPTLQSEGRIREFPVFGEVEGIFLVGVIDELHYTSKGELELAELKTRRRPVLPLSAQKKKDYFQVSLYKYIFDAMVQGKVTPASLIHHTKLCVDKPLGPSVLRHARQGGVSVKSLGDLMELVFLSLTLSDLPAIDTLKLEYVHQETATTLGTEIVAFEEKEVKSKVRHFVAYWMGRRDPQGVDVEEAWKCRTCDYVDICEWRRSSGMLSSLREPKAKKLK", "length": 373 }, "evidence": [ { "id": "F1SCQ8", "url": "https://omabrowser.org/oma/group/F1SCQ8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1Q514-1", "protein_name": "Exonuclease V", "gene_name": "exo5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMDASRSQQPLDAWDDISDSEFLNIPSDEESIESQLPLIGETKGKHSVNLDKPSSSSSFHKCSEEAPKQEAVKTDDVRGLKRKSLHENSFSPMQRFRKQHLSVTLLCDQTWCEMKSVYNLLKPHIKRKEMQRTEVQIGQEIHLSRELEIQDVVPVDIRTREDGEAVKLLNMLHMIPLLEAGQRVREFPVFGVQEGVFIMGVIDELMYNQKGELVLNELKTRRQNSLPSSAQDKVNCFQVGLYKLLFDGLVRGEMKKNHIFDHLKLRSAQILGAGVQAHAKNLGVHARTFEELVETLLITVSCSDLPCIDLLQIEYFHQGSNGPIGTRVAPFDEAQIRGELQAYLSYWTGQREPKGVDIEEAWKCRSCLYEEICEWRKNRFTVSDQQAAHSSSHL", "length": 394 }, "evidence": [ { "id": "F1SCQ8", "url": "https://omabrowser.org/oma/group/F1SCQ8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3HCM8-1", "protein_name": "Exonuclease V", "gene_name": "Exo5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAETGEEETASAEASGFSDLSDSELVEFLDLEEAKESTASLSKPGPSSELPGKDGKPGSLQNWKNGSDVLSPMERFHLKYLYVTDLCTQNWCELQMVYGKELPGSLTPEKAAVLDTGASIHLAKELELHDLVTVPITTKEDAWAIKFLNILSMIPTLQSEGRIREFPVFGEVEGIFLVGVIDELHYTSKGELELAELKTRRRPVLPLSAQKKKDYFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLDKPLGPSVLRHARQGGFSVKSLSDLMELVFLSLTLSDLPAIDTLKLEYIHQETASVLGTEIVAFEEKEVKSKVQHYVAYWTGHRDPQGVDVEEAWKCRTCDYADICEWRRGCGAPSSTLEPKDRQLK", "length": 373 }, "evidence": [ { "id": "F1SCQ8", "url": "https://omabrowser.org/oma/group/F1SCQ8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9CXP9-1", "protein_name": "Exonuclease V", "gene_name": "Exo5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETGEEETASAEASGFSDLSDSELVEFLDLEEAKESAVSLSKPGPSAELPGKDDKPVSLQNWKGGLDVLSPMERFHLKYLYVTDLCTQNWCELQMVYGKELPGSLTPEKAAVLDTGASIHLAKELELHDLVTVPIATKEDAWAVKFLNILAMIPALQSEGRVREFPVFGEVEGIFLVGVIDELHYTSKGELELAELKTRRRPVLPLPAQKKKDYFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLDKPLGPSVLRHARQGGVSVKSLGDLMELVFLSLTLSDLPAIDTLKLEYIHQETATILGTEIVAFEEKEVKSKVQHYVAYWMGHRDPQGVDVEEAWKCRTCDYVDICEWRRGSGVLSSSWEPKAKKFK", "length": 373 }, "evidence": [ { "id": "F1SCQ8", "url": "https://omabrowser.org/oma/group/F1SCQ8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FKK6-1", "protein_name": "Exonuclease V, chloroplastic", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAESPSESTSDSLSTTTSTKPAQSGTVSISSPQSHHVVFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSVSPSRITAGGSPKTIRSITLFSKRKLSACSDIEESYLHRFRRNQALGVTDLTGTEWCEKQMENVLCFGRRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLNSIAGVNQFLFEGRTRELLLLGFVGGQWIVGIIDELRKAYAEESSDSGPILIDTKTRLRDTLPAEPQRRNGRLQLMLYKLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRDHIANAGIKAQTLEEIVRYYENTFQMLPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMSKYREVIEFWRNEREAGYTPEEERWKCRYCQFAKSCPGNPSFESPSTSSPTREAPPLPS", "length": 413 }, "evidence": [ { "id": "F1SCQ8", "url": "https://omabrowser.org/oma/group/F1SCQ8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9H790-1", "protein_name": "Exonuclease V", "gene_name": "EXO5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAETREEETVSAEASGFSDLSDSEFLEFLDLEDAQESKALVNMPGPSSESLGKDDKPISLQNWKRGLDILSPMERFHLKYLYVTDLATQNWCELQTAYGKELPGFLAPEKAAVLDTGASIHLARELELHDLVTVPVTTKEDAWAIKFLNILLLIPTLQSEGHIREFPVFGEGEGVLLVGVIDELHYTAKGELELAELKTRRRPMLPLEAQKKKDCFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLEKPLGPSVLRHAQQGGFSVKSLGDLMELVFLSLTLSDLPVIDILKIEYIHQETATVLGTEIVAFKEKEVRAKVQHYMAYWMGHREPQGVDVEEAWKCRTCTYADICEWRKGSGVLSSTLAPQVKKAK", "length": 373 }, "evidence": [ { "id": "F1SCQ8", "url": "https://omabrowser.org/oma/group/F1SCQ8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" }, { "name": "single-stranded DNA 5'-3' DNA exonuclease activity", "id": "GO:0045145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045145", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "interstrand cross-link repair", "id": "GO:0036297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036297", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ8", "url": "https://www.uniprot.org/uniprotkb/F1SCQ8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SCQ8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 370, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SCQ8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SCQ8" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"MAVATVAAFLAALGGALWLAARRFVGPSVQRLHRGGDSGLMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQTEGPEEGPNSGGAGELVVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFAVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPAEGAQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDDSVARKLWDISEVMVGILK", "length": 336, "header": "tr|F1SCT9-1|F1SCT9_PIG Isoform 1 of Retinol dehydrogenase 14 OS=Sus scrofa OX=9823 GN=RDH14 PE=1 SV=1 CANONICAL=F1SCT9-1" }, "isoforms": [ { "isoform_ac": "F1SCT9-1", "url": "https://www.uniprot.org/uniprotkb/F1SCT9/entry#F1SCT9-1", "sequence": { "sequence": "MAVATVAAFLAALGGALWLAARRFVGPSVQRLHRGGDSGLMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQTEGPEEGPNSGGAGELVVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFAVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPAEGAQTSVYLASSPEVEGVSGKYFGDCKEEELLPKAMDDSVARKLWDISEVMVGILK", "length": 336, "header": "tr|F1SCT9-1|F1SCT9_PIG Isoform 1 of Retinol dehydrogenase 14 OS=Sus scrofa OX=9823 GN=RDH14 PE=1 SV=1 CANONICAL=F1SCT9-1" }, "locus": { "chromosome": "3", "start_pos": 119458343, "end_pos": 119454098, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009419.4", "url": "https://www.ensembl.org/id/ENSSSCT00000009419.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009178.2", "url": "https://www.ensembl.org/id/ENSSSCP00000009178.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCT9", "url": "https://www.uniprot.org/uniprotkb/F1SCT9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516970", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516970", "resource": "KEGG Pathway" }, { "id": "R-SSC-5365859", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5365859", "resource": "Reactome", "description": "RA biosynthesis pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2N5B7-1", "protein_name": "Retinol dehydrogenase 14", "gene_name": "Rdh14", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAVATVAAALLAALGGALWLATRRFSGARGQRMQGGGDRSLMHGKTVLITGANSGLGRATASELLRLGARVIMGCRDRARAEEAAGQLRQELGRAAGQEPNATEGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFSYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTPQEGAQTSIYLASSPEVEGVSGRYFGDCKEEDLLPKAMDESVARKLWDISEVMVGILK", "length": 334 }, "evidence": [ { "id": "F1SCT9", "url": "https://omabrowser.org/oma/group/F1SCT9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3ZUY0-1", "protein_name": "Retinol dehydrogenase 14", "gene_name": "Rdh14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVASVAAALLAALGGALWLAARRFSGSSGQRRQGGGDPGLMHGKTVLITGANSGLGRATAGELLRLGARVIMGCRDRARAEEAAGQLRQELGQAGGLGPDATDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFQCPYTKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKLANILFTRELAHRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTPLEGAQTSIYLASSPDVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGILK", "length": 334 }, "evidence": [ { "id": "F1SCT9", "url": "https://omabrowser.org/oma/group/F1SCT9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q17QW3-1", "protein_name": "Retinol dehydrogenase 14", "gene_name": "RDH14", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAVGTAAALLAALGGILWLAARRFVGSSVQRLHQGRDSGLMRGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRERAEEAAGQLRREVCPAGGPDSGPNSGGAGELVVKELDLASLSSVRSFCQEMLQEEPRLDVLINNAGVFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFEDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTSVTVNVLHPGIVRTNLGRHIHIPLLVRPLFNLVSWAFFKTPEEGAQTAVYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGILK", "length": 336 }, "evidence": [ { "id": "F1SCT9", "url": "https://omabrowser.org/oma/group/F1SCT9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9ERI6-1", "protein_name": "Retinol dehydrogenase 14", "gene_name": "Rdh14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAVASVAAALLAALGGALWLAARRFSGPRNQRQQGGGDPGLMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFHCPYTKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGEINFEDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTPLEGAQTSIYLACSPDVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGILK", "length": 334 }, "evidence": [ { "id": "F1SCT9", "url": "https://omabrowser.org/oma/group/F1SCT9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HBH5-1", "protein_name": "Retinol dehydrogenase 14", "gene_name": "RDH14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVATAAAVLAALGGALWLAARRFVGPRVQRLRRGGDPGLMHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFLLTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFDDLNSEQSYNKSFCYSRSKLANILFTRELARRLEGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMVGLLK", "length": 336 }, "evidence": [ { "id": "F1SCT9", "url": "https://omabrowser.org/oma/group/F1SCT9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SCT9", "url": "https://www.uniprot.org/uniprotkb/F1SCT9" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F1SCT9", "url": "https://www.uniprot.org/uniprotkb/F1SCT9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SCT9", "url": "https://www.uniprot.org/uniprotkb/F1SCT9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "all-trans-retinol dehydrogenase (NADP+) activity", "id": "GO:0052650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052650", "evidence": [ { "database": "UniProtKB", "id": "F1SCT9", "url": "https://www.uniprot.org/uniprotkb/F1SCT9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 212, "end_pos": 214, "annotation": "n_glycosylation_sequon" }, { "start_pos": 239, "end_pos": 241, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "25033", "name": "", "equation": "all-trans-retinol + NADP(+) = all-trans-retinal + NADPH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "25033", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/25033" } ] }, { "id": "54912", "name": "", "equation": "11-cis-retinol + NADP(+) = 11-cis-retinal + NADPH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "54912", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/54912" } ] }, { "id": "54916", "name": "", "equation": "9-cis-retinol + NADP(+) = 9-cis-retinal + NADPH + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "54916", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/54916" } ] }, { "id": "R-SSC-5419165", "name": "RDH11,14,DHRS3,DRHS4 reduce atRAL to atROL", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol, endoplasmic reticulum membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5419165", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5419165" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 212, "end_pos": 214 }, { "start_pos": 239, "end_pos": 241 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SCU8-1", "uniprot_ac": "F1SCU8", "uniprot_id": "F1SCU8_PIG", "mass": { "chemical_mass": 22109.0, "monoisotopic_mass": 22109.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100523732", "type": "recommended", "evidence": [ { "id": "F1SCU8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCU8" } ] } ], "protein_names": [ { "name": "B(0,+)-type amino acid transporter 1", "type": "recommended", "evidence": [ { "id": "F1SCU8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCU8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SCU8", "url": "https://www.uniprot.org/uniprotkb/F1SCU8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100523732", "url": "https://www.uniprot.org/uniprotkb/F1SCU8", "locus": {} } ], "crossref": [ { "id": "F1SCU8", "url": "https://alphafold.ebi.ac.uk/entry/F1SCU8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008599", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008599", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR002293", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002293", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11785", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11785", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11785:SF340", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11785:SF340", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13520", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13520", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SCU8", "url": "https://www.uniprot.org/uniprotkb/F1SCU8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCU8-1", "url": "https://www.uniprot.org/uniprotkb/F1SCU8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVSWGNQVLGAWAWLVPLAVALATFGSVNGLFFSGSRVCYVAAREGHMPRLLSMVHVRRFTPAPALMFTTAVALVLVTPGSFNTIVNSLSFLGWLTYGTTISCLLYLRMKKKKNLPRPYKVPIIIPAIMLLASLYLVLAPILDHPQMEFLYLFLFLLSGLPVYFLFVYFRCQPRCLQVATLHLQLLLEVAPTTKNAD", "length": 198, "header": "tr|F1SCU8-1|F1SCU8_PIG Isoform 1 of B(0,+)-type amino acid transporter 1 OS=Sus scrofa OX=9823 GN=LOC100523732 PE=4 SV=4 CANONICAL=F1SCU8-1" }, "isoforms": [ { "isoform_ac": "F1SCU8-1", "url": "https://www.uniprot.org/uniprotkb/F1SCU8/entry#F1SCU8-1", "sequence": { "sequence": 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"MDLVITQELARAESQQDAASLERAYQLIKSANLGKSEFDPTESFSPDLFVLCAEQALKMGRPGMSQDCIQMYFKVKGPVTQFLGRAHLCRAQLCAPKSTEDMGDFENCVTQYMKTVNFARGEPRYHFLVYNASVLYWQMVRPFLKPGYRRHLIPSLSQIVNVLNQIEEEDKDWRAELMLELLECYLQAGRKEEAAEFCATAAPFIRAHAPRRYQQVFARMVSRDVKECGQKSRLDKNDLPEDIPGILREAYEDLGRGSHQRVPSAAEDQILLLFELAHLSLTLKCEEVCSDCLSDLKKMDSKDPGELIETECLECALEALRLEQKIKIYTREAVETQLTVIQRLDLALQRAVRLGEPRVTHVVCSTQWNACLPLLQHNLRHHLRKPLTNIAEALETVDSLMVPLRCQVHMEVAHIEEDADRLEPAMEHLRKAMLLDSLGLYQDGLRTAFNRLRLCTMLYQTPERAEDKATMAIEQAKKALAKDSVRKKRALLVNAGLALAPDTFQVVLDSENEAKVSIGKSRGRFTHLFAKARHHSLSVDKAAGHLRRLGSRNDKERIQIWAELAKVARQQGVWDVCRAACHFCLLYDSVKVKKPARLKRGKKRKGGEGARQDSRNHSDTTLQKQMSPSLLRTVAEVGFISAEATVHLLQSEGVQLNDRPTPPKDLSQHPVGYVPERPEDNAEWVVYRTWIESLSQHAMNSWLRSAEIGHQLREAWIVHNAVVYVLNHNQHLIMAGRQRELVDPLYHLLGLVKATGHSGDPVLLAALCSALARGLIVPWIPAPMPEKSRKQARSNPPHTPLDPEAASEVRTAVEVCEFALNLTNGTVPEDAVPVKARQQLIATWVKAKQLLQQQVGPRLGTDEQSTNEDVTSVTRVLVALELYSCNGLGLMDFTVPPLAQLVKMSAACSWSDPLVELQTLTRLTHFSYMARDHEATMACSQRAIQTGVKSLRSSLSRAEAQLVAEMLSTAACIQGRSIMDNLKGRKQLRLTAAKAFMEGARFGGLAGSSALVMLAARHCWNSWLPLLSSAVSRRQCRGPTQRLLSIISKTEARKQEKGQTLPLHQWPTADFHGGAATDGHFLPGAEDDLTLRAALYGLLFHSYADQDDWEGGLKVLDEALQVLPRTAHRLLIFKHMVIAKAKLGQNFMMEIQKFKDQSEGYLAHMWHRLALNSRSVHGELTCYHNAIQALQKPESEWQKVDYIMEFSQWLYHKQFPLEDVVFHLKWAVDILLQMQQDRGTPEPAEEHASAQATLEGPGPEDARTTSLEGLRSVRQLEALARAYTLLALVATPSDARHQDYCLMAYTSLCRIWQVSFSTAGRSLSESKIPAAASSQLLLPKKEKEKSQDREKDKDKGRGPKQVPRPPKWQAVPRHPGVTLPEAAEGEGPPARSCFLSRGTRGVSGFSLAATGIVSTNLPASLEEWASYACPEEVVAVFQQDRSDFTINPWSVEKPTYALYYVDRLVKALQDALLPELTIPVLQLGLLIAASVVESQSLEGLYHLRWWLLGALLMCASLIAAETEHFRGPWLFSFYFNACFTYVSCRKELALKKERNRGPLLEESLLAPSEAPAPARQAEMKPLVAEDKLLMINRETGKGLDGAALPQLWTLKAEVLLDMGLYQPARLLLSEAHLAFQELNDPCAESKCLHLLAQLANKEKNHGQAKELVEWAQRLGGGAEFWYSSSLTLAEALLSLEPLERREAQVCQLFQKLIGTFDVLKKERPNQMPMLEFMTTDLEARCVSLQIRAMREPLEDPLLLAELGDRLLEIEEKFLSCGYKERGVDMRLERAKMRRLSAQNEKDEERRSACYLEVCDLVQRAVAEEEAAFHRVRGLLSLQELQNINSPLMRRLARLKCSLVEVCLDLLRLTWEEAQERELQQGSVDRLLADYLRSPSDYTSVGLKWFTLKRTLTHTVLAQLGSLQPLCARCVELRAQLLGLAGKALHLLAMRADPVRPAFYWEESPLVRTPPSSLKCLETIQEEGDDEGLHCDLPASRAAPEEHSRKGSDLKRRMALARRYLAQASEVLLQCLQVALGSSLLDVAAAASLELVECSSNLDPAATCQFLALSQSCSASETMRDILLTATADTSSSQLAALLQLQHRLKHQGRMSSSLFASVEQKLATISKAWQNLRVTEQHFNLLNEIPPAFRILFLHHSGDRTHLYGAAYEKPKLTPSAKGKMLQMGGEFRQRLYPAQPLAPGTPVTQTRKSLHSLTCWPWDPALPLRLRRPAGLAVLGATPALVFPPTVQPEVADSIILIAGRDLLQLPLEGLSVFDEGTVSSVSREFSLQMLWNRLRKEETGENVSFAGAAAPTPEPGVLFLLNQGAVVVDPYEEAQGAEVLTPVSVTREILDRFRDAFTMRWTGHLGNAHFPSQAEWEQLLGSCQGFFFYGMENFLSHILVERLAAMNLEECKMVVLLDLTRSYESMRRHLESSERKSAPQLALEGSTETAILLSLVGVRSIVANQWWTALQDNAMRAIVLWENLLAAGKPIGKTTRLLQRKGADELPQTWKDKLALPRLQLQGSERLPFSLNLVLYGLPHQAIL", "length": 2546, "header": "tr|F1SCV6-1|F1SCV6_PIG Isoform 1 of Cilia and flagella associated protein 46 OS=Sus scrofa OX=9823 GN=CFAP46 PE=4 SV=4 CANONICAL=F1SCV6-1" }, "isoforms": [ { "isoform_ac": "A0A287BAS2-1", "url": "https://www.uniprot.org/uniprotkb/F1SCV6/entry#A0A287BAS2-1", "sequence": { "sequence": "MGRPGMSQDCIQMYFKVKGPVTQFLGRAHLCRAQLCAPKSTEDMGDFENCVTQYMKTVNFARGEPRYHFLVYNASVLYWQMVRPFLKPGYRRHLIPSLSQIVNVLNQIEEEDKDWRAELMLELLECYLQAGRKEEAAEFCATAAPFIRAHAPRRYQQVFARMVSRDVAVALQPPLSQCYFISISRILLLFELAHLSLTLKCEEVCSDCLSDLKKMDSKTAAPAHLLLCPGLWLGPGLPWLARGTQLTVIQRLDLALQRAVRLGEPRVTHVVCSTQWNACLPLLQHNLRHHLRKPLTNIAEALETVDSLMVPLRCQVHMEVAHIEEDADRLEPAMEHLRKAMLLDSLGLYQDGLRTAFNRLRLCTMLYQTPERAEDKATMAIEQAKKALAKDSVRKKRALLVNAGLALAPDTFQVVLDSENEAKVSIGKSRGRFTHLFAKARHHSLSVDKAAGHLRRLGSRNDKERIQIWAELAKVARQQGVWDVCRAACHFCLLYDSVKVKKPARLKRGKKRKGGEGARQDSRNHSDTTLQKQMSPSLLRTVAEVGFISAEATVHLLQSEGVQLNDRPTPPKDLSQHPVGYVPERPEDNAEWVVYRTWIESLSQHAMNSWLRSAEIGHQLREAWIVHNAVVYVLNHNQHLIMAGRQRELVDPLYHLLGLVKATGHSGDPVLLAALCSALARGLIVPWIPAPMPEKSRKQARSNPPHTPLDPEAASEVRTAVEVCEFALNLTNGTVPEDAVPVKARQQLIATWVKAKQLLQQQVGPRLGTDEQSTNEDVTSVTRVLVALELYSCNGLGLMDFTVPPLAQLVKMSAACSWSDPLVELQTLTRLTHFSYMARDHEATMACSQRAIQTGVKSLRSSLSRAEAQLVAEMLSTAACIQGRSIMDNLKGRKQLRLTAAKAFMEGARFGGLAGSSALVMLAARHCWNSWLPLLSSAVSRRQCRGPTQRLLSIISKTEARKQVRSRPGTWAPQVQGPP", "length": 979, "header": "tr|A0A287BAS2-1|A0A287BAS2_PIG Computationally mapped isoform of Cilia and flagella associated protein 46 OS=Sus scrofa OX=9823 GN=CFAP46 PE=4 SV=2 CANONICAL=F1SCV6-1" }, "locus": { "chromosome": "14", "start_pos": 141001547, "end_pos": 140963647, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060365.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060365.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053195.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053195.2" } ] } }, { "isoform_ac": "F1SCV6-1", "url": "https://www.uniprot.org/uniprotkb/F1SCV6/entry#F1SCV6-1", "sequence": { "sequence": "MDLVITQELARAESQQDAASLERAYQLIKSANLGKSEFDPTESFSPDLFVLCAEQALKMGRPGMSQDCIQMYFKVKGPVTQFLGRAHLCRAQLCAPKSTEDMGDFENCVTQYMKTVNFARGEPRYHFLVYNASVLYWQMVRPFLKPGYRRHLIPSLSQIVNVLNQIEEEDKDWRAELMLELLECYLQAGRKEEAAEFCATAAPFIRAHAPRRYQQVFARMVSRDVKECGQKSRLDKNDLPEDIPGILREAYEDLGRGSHQRVPSAAEDQILLLFELAHLSLTLKCEEVCSDCLSDLKKMDSKDPGELIETECLECALEALRLEQKIKIYTREAVETQLTVIQRLDLALQRAVRLGEPRVTHVVCSTQWNACLPLLQHNLRHHLRKPLTNIAEALETVDSLMVPLRCQVHMEVAHIEEDADRLEPAMEHLRKAMLLDSLGLYQDGLRTAFNRLRLCTMLYQTPERAEDKATMAIEQAKKALAKDSVRKKRALLVNAGLALAPDTFQVVLDSENEAKVSIGKSRGRFTHLFAKARHHSLSVDKAAGHLRRLGSRNDKERIQIWAELAKVARQQGVWDVCRAACHFCLLYDSVKVKKPARLKRGKKRKGGEGARQDSRNHSDTTLQKQMSPSLLRTVAEVGFISAEATVHLLQSEGVQLNDRPTPPKDLSQHPVGYVPERPEDNAEWVVYRTWIESLSQHAMNSWLRSAEIGHQLREAWIVHNAVVYVLNHNQHLIMAGRQRELVDPLYHLLGLVKATGHSGDPVLLAALCSALARGLIVPWIPAPMPEKSRKQARSNPPHTPLDPEAASEVRTAVEVCEFALNLTNGTVPEDAVPVKARQQLIATWVKAKQLLQQQVGPRLGTDEQSTNEDVTSVTRVLVALELYSCNGLGLMDFTVPPLAQLVKMSAACSWSDPLVELQTLTRLTHFSYMARDHEATMACSQRAIQTGVKSLRSSLSRAEAQLVAEMLSTAACIQGRSIMDNLKGRKQLRLTAAKAFMEGARFGGLAGSSALVMLAARHCWNSWLPLLSSAVSRRQCRGPTQRLLSIISKTEARKQEKGQTLPLHQWPTADFHGGAATDGHFLPGAEDDLTLRAALYGLLFHSYADQDDWEGGLKVLDEALQVLPRTAHRLLIFKHMVIAKAKLGQNFMMEIQKFKDQSEGYLAHMWHRLALNSRSVHGELTCYHNAIQALQKPESEWQKVDYIMEFSQWLYHKQFPLEDVVFHLKWAVDILLQMQQDRGTPEPAEEHASAQATLEGPGPEDARTTSLEGLRSVRQLEALARAYTLLALVATPSDARHQDYCLMAYTSLCRIWQVSFSTAGRSLSESKIPAAASSQLLLPKKEKEKSQDREKDKDKGRGPKQVPRPPKWQAVPRHPGVTLPEAAEGEGPPARSCFLSRGTRGVSGFSLAATGIVSTNLPASLEEWASYACPEEVVAVFQQDRSDFTINPWSVEKPTYALYYVDRLVKALQDALLPELTIPVLQLGLLIAASVVESQSLEGLYHLRWWLLGALLMCASLIAAETEHFRGPWLFSFYFNACFTYVSCRKELALKKERNRGPLLEESLLAPSEAPAPARQAEMKPLVAEDKLLMINRETGKGLDGAALPQLWTLKAEVLLDMGLYQPARLLLSEAHLAFQELNDPCAESKCLHLLAQLANKEKNHGQAKELVEWAQRLGGGAEFWYSSSLTLAEALLSLEPLERREAQVCQLFQKLIGTFDVLKKERPNQMPMLEFMTTDLEARCVSLQIRAMREPLEDPLLLAELGDRLLEIEEKFLSCGYKERGVDMRLERAKMRRLSAQNEKDEERRSACYLEVCDLVQRAVAEEEAAFHRVRGLLSLQELQNINSPLMRRLARLKCSLVEVCLDLLRLTWEEAQERELQQGSVDRLLADYLRSPSDYTSVGLKWFTLKRTLTHTVLAQLGSLQPLCARCVELRAQLLGLAGKALHLLAMRADPVRPAFYWEESPLVRTPPSSLKCLETIQEEGDDEGLHCDLPASRAAPEEHSRKGSDLKRRMALARRYLAQASEVLLQCLQVALGSSLLDVAAAASLELVECSSNLDPAATCQFLALSQSCSASETMRDILLTATADTSSSQLAALLQLQHRLKHQGRMSSSLFASVEQKLATISKAWQNLRVTEQHFNLLNEIPPAFRILFLHHSGDRTHLYGAAYEKPKLTPSAKGKMLQMGGEFRQRLYPAQPLAPGTPVTQTRKSLHSLTCWPWDPALPLRLRRPAGLAVLGATPALVFPPTVQPEVADSIILIAGRDLLQLPLEGLSVFDEGTVSSVSREFSLQMLWNRLRKEETGENVSFAGAAAPTPEPGVLFLLNQGAVVVDPYEEAQGAEVLTPVSVTREILDRFRDAFTMRWTGHLGNAHFPSQAEWEQLLGSCQGFFFYGMENFLSHILVERLAAMNLEECKMVVLLDLTRSYESMRRHLESSERKSAPQLALEGSTETAILLSLVGVRSIVANQWWTALQDNAMRAIVLWENLLAAGKPIGKTTRLLQRKGADELPQTWKDKLALPRLQLQGSERLPFSLNLVLYGLPHQAIL", "length": 2546, "header": "tr|F1SCV6-1|F1SCV6_PIG Isoform 1 of Cilia and flagella associated protein 46 OS=Sus scrofa OX=9823 GN=CFAP46 PE=4 SV=4 CANONICAL=F1SCV6-1" }, "locus": { "chromosome": "14", "start_pos": 141002659, "end_pos": 140916534, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011782.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011782.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011480.4", "url": "https://www.ensembl.org/id/ENSSSCP00000011480.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 2239, "start_aa": "Thr", "end_pos": 2239, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr2239", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 2314, "start_aa": "Thr", "end_pos": 2314, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr2314", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 661, "start_aa": "Thr", "end_pos": 661, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr661", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCV6", "url": "https://www.uniprot.org/uniprotkb/F1SCV6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cilium movement involved in cell motility", "id": "GO:0060294", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060294", "evidence": [ { "database": "UniProtKB", "id": "F1SCV6", "url": "https://www.uniprot.org/uniprotkb/F1SCV6" } ], "pmid": "" }, { "name": "axoneme assembly", "id": "GO:0035082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035082", "evidence": [ { "database": "UniProtKB", "id": "F1SCV6", "url": "https://www.uniprot.org/uniprotkb/F1SCV6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 131, "end_pos": 133, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2304, "end_pos": 2306, "annotation": "n_glycosylation_sequon" }, { "start_pos": 616, "end_pos": 618, "annotation": "n_glycosylation_sequon" }, { "start_pos": 821, "end_pos": 823, "annotation": "n_glycosylation_sequon" }, { "start_pos": 824, "end_pos": 826, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 661, 2239, 2314 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 131, "end_pos": 133 }, { "start_pos": 2304, "end_pos": 2306 }, { "start_pos": 616, "end_pos": 618 }, { "start_pos": 821, "end_pos": 823 }, { "start_pos": 824, "end_pos": 826 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", 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"MGILYSEPICQAAYQNDLGQVWRWVKEDRSFINVQDGFNGDTPLICACRRGHLRMVSFLLRRNADVNLKNQKERTCLHYAVKKRFTFFDYLLIILLMPVLLIGYFLMVSKTKQNEALVRMLLEAGVEVNATDCYGCTALHYACEMKNQTLIPLLLKAHADPRIKNKHGESSLDIARRLKFSQIELMLRKAT", "length": 191, "header": "tr|F1SCY9-1|F1SCY9_PIG Isoform 1 of Ankyrin repeat domain 22 OS=Sus scrofa OX=9823 GN=ANKRD22 PE=4 SV=3 CANONICAL=F1SCY9-1" }, "locus": { "chromosome": "14", "start_pos": 100772097, "end_pos": 100749343, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011430.4", "url": "https://www.ensembl.org/id/ENSSSCT00000011430.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011133.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011133.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe 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"title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SD01-1", "uniprot_ac": "F1SD01", "uniprot_id": "F1SD01_PIG", "mass": { "chemical_mass": 64307.0, "monoisotopic_mass": 64307.0 }, "refseq": { "ac": "XP_005671305", "name": "cleavage stimulation factor subunit 2 tau variant", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671305" }, "gene_names": [ { "name": "CSTF2T", "type": "recommended", "evidence": [ { "id": "F1SD01", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD01" } ] }, { "name": "CSTF2T", "type": "synonym", "evidence": [ { "id": "XP_005671305", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671305" } ] } ], "protein_names": [ { "name": "Cleavage stimulation factor subunit 2 tau variant", "type": "synonym", "evidence": [ { "id": "F1SD01", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD01/entry#names_and_taxonomy" } ] }, { "name": "cleavage stimulation factor 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"MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGPGPGPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGPGPGSLTPGGAMQPQVGMPGVGPVPLERGQMQISDPRAPMPRGPMAPGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHASGHDSRGPSSHEMRGGPLADPRLLIGEPRGPMIDQRGLPMDGRGSRDSRGMEARAMETEVLETRVMERRGMETCALETRGMEARGMDARGMEMRGPGPSSRGPMSGGIQGPGPINIGAGGPQGPRQVPSISGVGNPGAGMQGAGMQGASMQGAGMQGAGMQGAGMQGAGMQGAGMQGAGIQGPGKQGGGQASSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS", "length": 615, "header": "tr|F1SD01-1|F1SD01_PIG Isoform 1 of Cleavage stimulation factor subunit 2 tau variant OS=Sus scrofa OX=9823 GN=CSTF2T PE=1 SV=1 CANONICAL=F1SD01-1" }, "isoforms": [ { "isoform_ac": "F1SD01-1", "url": "https://www.uniprot.org/uniprotkb/F1SD01/entry#F1SD01-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCT00000011415.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011119.2", "url": "https://www.ensembl.org/id/ENSSSCP00000011119.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SD01", "url": "https://www.uniprot.org/uniprotkb/F1SD01" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157243", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157243", "resource": "KEGG Pathway" }, { "id": "R-SSC-72187", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72187", "resource": "Reactome", "description": "mRNA 3'-end processing" }, { "id": "R-SSC-73856", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-73856", "resource": "Reactome", "description": "RNA Polymerase II Transcription Termination" }, { "id": "R-SSC-77595", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77595", "resource": "Reactome", "description": "Processing of Intronless Pre-mRNAs" }, { "id": "R-SSC-9770562", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9770562", "resource": "Reactome", "description": "mRNA Polyadenylation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0L6W5-1", "protein_name": "Cleavage stimulation factor subunit 2, tau variant", "gene_name": "Cstf2t", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGGPGGPGGPGGPGPGPAPGLCPGPNVMLNQQNPAPQPQHLPRRPVKDIPPLMQTSIQGGIPAPGPIPAAVPGPGPGSLTPGGTMQPQVGMPVVGPVPLERGQMQISDPRPPMPRGPMPSGGIPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYMGPPHQGPPMHHGHDNRGPASHDMRGGPLAADPRMLIGEPRGPMMDQRGLPMDGRGGRDSRGMEARPMETEVLEPRGMERRMETCAMETRGMEARGIDARGLEMRGPGPSSRGPMTGGIQGPGPINMGAGGPQGPRQVPNIAGVGNPGGAMQGAGIQGAGMQGAGMQGGGMQGAGMQGGGMQGAGMQGGGMQGAGMQGASKQGAGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS", "length": 629 }, "evidence": [ { "id": "F1SD01", "url": "https://omabrowser.org/oma/group/F1SD01/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8C7E9-1", "protein_name": "Cleavage stimulation factor subunit 2 tau variant", "gene_name": "Cstf2t", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGGPGPSGPGGPGPGPAPGLCPGPNVMLNQQNPPAPQPQHLPRRPVKDIPPLMQTSIQGGIPAPGPIPAAVPGPGPGSLTPGGAMQPQVGMPVVGPVPLERGQMQISDPRPPMPRGPMPSGGIPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYMGPPHQGPPMHHGHDNRGPASHDMRGGPLAADPRMLIGEPRGPMIDQRGLPMDGRGGRESRGMETRPMETEVLEPRGMERRMETCAMETRGMDARGLEMRGPGPSSRGPMTGGIQGPGPINMGAGGPQGPRQVPNIAGVGNPGGTMQGAGIQGGGMQGAGMQGGGMQGAGMQGGGMQGAGMQAGMQGASMQGGMQGAGMQGASKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS", "length": 632 }, "evidence": [ { "id": "F1SD01", "url": "https://omabrowser.org/oma/group/F1SD01/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H0L4-1", "protein_name": "Cleavage stimulation factor subunit 2 tau variant", "gene_name": "CSTF2T", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQSVSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGAGPGSLTPGGAMQPQLGMPGVGPVPLERGQVQMSDPRAPIPRGPVTPGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHASGHDTRGPSSHEMRGGPLGDPRLLIGEPRGPMIDQRGLPMDGRGGRDSRAMETRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPSSRGPMTGGIQGPGPINIGAGGPPQGPRQVPGISGVGNPGAGMQGTGIQGTGMQGAGIQGGGMQGAGIQGVSIQGGGIQGGGIQGASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS", "length": 616 }, "evidence": [ { "id": "F1SD01", "url": "https://omabrowser.org/oma/group/F1SD01/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F1SD01", "url": "https://www.uniprot.org/uniprotkb/F1SD01" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mRNA cleavage and polyadenylation specificity factor complex", "id": "GO:0005847", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005847", "evidence": [ { "database": "UniProtKB", "id": "F1SD01", "url": "https://www.uniprot.org/uniprotkb/F1SD01" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA 3'-end processing", "id": "GO:0031124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031124", "evidence": [ { "database": "UniProtKB", "id": "F1SD01", "url": "https://www.uniprot.org/uniprotkb/F1SD01" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SD01", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD01" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RRM", "eco_id": "ECO_0000259", "start_pos": 16, "end_pos": 94, "start_aa": "Arg", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SD06-1", "uniprot_ac": "F1SD06", "uniprot_id": "F1SD06_PIG", "mass": { "chemical_mass": 95257.0, "monoisotopic_mass": 95257.0 }, "refseq": {}, "gene_names": [ { "name": "PCDH15", "type": "recommended", "evidence": [ { "id": "F1SD06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD06" } ] } ], "protein_names": [ { "name": "Cadherin domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1SD06", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD06/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SD06", "url": "https://www.uniprot.org/uniprotkb/F1SD06" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PCDH15", "url": "https://www.uniprot.org/uniprotkb/F1SD06", "locus": {} } ], "crossref": [ { "id": "F1SD06", "url": "https://alphafold.ebi.ac.uk/entry/F1SD06", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010426", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010426", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11304", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11304", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "6BXZ", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=6BXZ&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "IPR002126", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002126", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015919", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015919", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020894", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020894", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039808", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039808", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050971", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24025", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24025", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24025:SF31", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24025:SF31", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24027", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24027", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24027:SF442", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24027:SF442", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "pdb_00006bxz", "url": "https://www.rcsb.org/structure/pdb_00006bxz", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "6BXZ", "url": "https://www.rcsb.org/structure/6BXZ", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "PF00028", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00028", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23206", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23206", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FGP2", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGP2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ56", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ56", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJ56-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJ56-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD06", "url": "https://www.uniprot.org/uniprotkb/F1SD06", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD06-1", "url": "https://www.uniprot.org/uniprotkb/F1SD06-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIIACVHQLNIYCCREENLPPGTTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVDDIQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVKILVLHPGEIPRFTQEEYRPPPVSELAAKGTMVGLISAAAINQSIVYSIVSGNEEDKFGINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDHPPVFQKKFYIGGVSEDARMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRAVDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLALAFIIILCCIPAILVVLVSYRQRGYTSEQQQLLRPSLLKPEELSMESGIDPGQEYGQDYYSYEHGYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEWARKRMIKLVVDREYETSSTGEDSAPECQRNRLHNPNIHSNINGNIYIAQNGSVVRTRRACLTDNLKVTSPVRLGKHFKKIDKLAVTHEENVPLNTLSKGPFSTEKMNSRPTLVTFAPCHVGTDSTAVKPLGNRLKSTVQQESVVDSKNIKEALEFHSDHTQSDDEELWMGPWNNLHIPMTKL", "length": 850, "header": "tr|F1SD06-1|F1SD06_PIG Isoform 1 of Cadherin domain-containing protein OS=Sus scrofa OX=9823 GN=PCDH15 PE=1 SV=5 CANONICAL=F1SD06-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FGP2-1", "url": "https://www.uniprot.org/uniprotkb/F1SD06/entry#A0A8W4FGP2-1", "sequence": { "sequence": "MIIACVHQLNIYCCREENLPPGTTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVDDIQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKVSEVFSL", "length": 197, "header": "tr|A0A8W4FGP2-1|A0A8W4FGP2_PIG Computationally mapped isoform of Cadherin domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F1SD06-1" }, "locus": { "chromosome": "14", "start_pos": 96250813, "end_pos": 96209224, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101397.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101397.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078487.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078487.1" } ] } }, { "isoform_ac": "A0A8W4FJ56-1", "url": "https://www.uniprot.org/uniprotkb/F1SD06/entry#A0A8W4FJ56-1", "sequence": { "sequence": "MIIACVHQLNIYCCREENLPPGTTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVDDIQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVKILVLHPGEIPRFTQEEYRPPPVSELAAKGTMVGLISAAAINQSIVYSIVSGNEEDKFGINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDHPPVFQKKFYIGGVSEDARMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRAVDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLALAFIIILCCIPAILVVLQQQLLRPSLLKPEELSMESGIDPGQEYGQDYYSYEHGYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEWARKRMIKLVVDREYETSSTGEDSAPECQRNRLHNPNIHSNINGNIYIAQNGSVVRTRRACLTDNLKVTSPVRLGKHFKKIDKLAVTHEENVPLNTLSKGPFSTEKMNSRPTLVTFAPCHVGTDSTAVKPLGNRLKSTVQQESVVDSKNIKEALEFHSDHTQSDDEELWMGPWNNLHIPMTKL", "length": 839, "header": "tr|A0A8W4FJ56-1|A0A8W4FJ56_PIG Computationally mapped isoform of Cadherin domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F1SD06-1" }, "locus": { "chromosome": "14", "start_pos": 96388603, "end_pos": 96209224, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100146.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100146.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078924.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078924.1" } ] } }, { "isoform_ac": "F1SD06-1", "url": "https://www.uniprot.org/uniprotkb/F1SD06/entry#F1SD06-1", "sequence": { "sequence": "MIIACVHQLNIYCCREENLPPGTTFLQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVDDIQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSATVKILVLHPGEIPRFTQEEYRPPPVSELAAKGTMVGLISAAAINQSIVYSIVSGNEEDKFGINNITGVIYVNAPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENDHPPVFQKKFYIGGVSEDARMFASVLRVKATDKDTGNYSAMAYRLIIPPIKEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRAVDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLALAFIIILCCIPAILVVLVSYRQRGYTSEQQQLLRPSLLKPEELSMESGIDPGQEYGQDYYSYEHGYEMPQYGSRRRLLPPAGQEEYGEVVGEAEEEYEEEEWARKRMIKLVVDREYETSSTGEDSAPECQRNRLHNPNIHSNINGNIYIAQNGSVVRTRRACLTDNLKVTSPVRLGKHFKKIDKLAVTHEENVPLNTLSKGPFSTEKMNSRPTLVTFAPCHVGTDSTAVKPLGNRLKSTVQQESVVDSKNIKEALEFHSDHTQSDDEELWMGPWNNLHIPMTKL", "length": 850, "header": "tr|F1SD06-1|F1SD06_PIG Isoform 1 of Cadherin domain-containing protein OS=Sus scrofa OX=9823 GN=PCDH15 PE=1 SV=5 CANONICAL=F1SD06-1" }, "locus": { "chromosome": "14", "start_pos": 96388603, "end_pos": 96209224, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011410.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011410.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011114.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011114.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "A Mechanically Weak Extracellular Membrane-Adjacent Domain Induces Dimerization of Protocadherin-15.", "journal": "Biophys. J.", "date": "2018", "authors": "De-la-Torre P, Choudhary D, Araya-Secchi R, Narui Y, Sotomayor M", "evidence": [ { "database": "UniProtKB", "id": "F1SD06", "url": "https://www.uniprot.org/uniprotkb/F1SD06" } ], "reference": [ { "type": "PubMed", "id": "30527337", "url": "https://glygen.org/publication/PubMed/30527337" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SD06", "url": "https://www.uniprot.org/uniprotkb/F1SD06" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SD06", "url": "https://www.uniprot.org/uniprotkb/F1SD06" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SD06", "url": "https://www.uniprot.org/uniprotkb/F1SD06" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": 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"UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKLQGFWAGLEYTCRLLGITTAAVLIGVGTETFFQGQFKSLAFYLLFIGAAVSVIEGAYFVAQLLAICFQCQPGSLAYRAKEKAHWLGCFQRFLAYMLLSVACFLHPVLVWHVTIPGSMLIITGLAYFLLSKRKKSKAASEVLAPPELYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPGSLFIHMKSILKGTRRPNALQHPEALTELTLEPADSLAKKKQVHFEDSVVRIIPALAEGLEDGDSEPEETTSDTTPIIPPPEAPPFLSSLSGDSLF", "length": 275, "header": "tr|F1SD17-1|F1SD17_PIG Isoform 1 of Transmembrane protein 72 OS=Sus scrofa OX=9823 GN=TMEM72 PE=4 SV=5 CANONICAL=F1SD17-1" }, "isoforms": [ { "isoform_ac": "A0A287BSX2-1", "url": "https://www.uniprot.org/uniprotkb/F1SD17/entry#A0A287BSX2-1", "sequence": { "sequence": "MKLQGFWAGLEYTCRLLGITTAAVLIGVGTETFFQGQFKSLAFYLLCQPGSLAYRAKEKAHWLGCFQRFLAYMLLSVACFLHPVLVWHVTIPGSMLIITGLAYFLLSKRKKSKAASEVLAPPELYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPGSLFIHMKSILKGTRRPNALQHPEALTELTLEPADSLAKKKQVHFEDSVVRIIPALAEGLEDGDSEPEETTSDTTPIIPPPEAPPFLSSLSGDSLF", "length": 251, "header": "tr|A0A287BSX2-1|A0A287BSX2_PIG Computationally mapped isoform of Transmembrane protein 72 OS=Sus scrofa OX=9823 GN=TMEM72 PE=4 SV=2 CANONICAL=F1SD17-1" }, "locus": { "chromosome": "14", "start_pos": 91169647, "end_pos": 91150477, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052872.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052872.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059248.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059248.2" } ] } }, { "isoform_ac": "F1SD17-1", "url": "https://www.uniprot.org/uniprotkb/F1SD17/entry#F1SD17-1", "sequence": { "sequence": "MKLQGFWAGLEYTCRLLGITTAAVLIGVGTETFFQGQFKSLAFYLLFIGAAVSVIEGAYFVAQLLAICFQCQPGSLAYRAKEKAHWLGCFQRFLAYMLLSVACFLHPVLVWHVTIPGSMLIITGLAYFLLSKRKKSKAASEVLAPPELYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPGSLFIHMKSILKGTRRPNALQHPEALTELTLEPADSLAKKKQVHFEDSVVRIIPALAEGLEDGDSEPEETTSDTTPIIPPPEAPPFLSSLSGDSLF", "length": 275, "header": "tr|F1SD17-1|F1SD17_PIG Isoform 1 of Transmembrane protein 72 OS=Sus scrofa OX=9823 GN=TMEM72 PE=4 SV=5 CANONICAL=F1SD17-1" }, "locus": { "chromosome": "14", "start_pos": 91169647, "end_pos": 91150477, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011396.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011396.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011101.5", "url": "https://www.ensembl.org/id/ENSSSCP00000011101.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda 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isoform of Regulatory factor X1 OS=Sus scrofa OX=9823 GN=RFX1 PE=4 SV=2 CANONICAL=F1SD60-1" }, "locus": { "chromosome": "2", "start_pos": 65204309, "end_pos": 65181008, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055519.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055519.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044574.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044574.2" } ] } }, { "isoform_ac": "F1SD60-1", "url": "https://www.uniprot.org/uniprotkb/F1SD60/entry#F1SD60-1", "sequence": { "sequence": "MATQAYVTELQAAPQPSQPPQAPPQPQPQPPPPPSAAPQPPQPPATAATPQPQYVTELQSPQPQAQPPGSQKQYVTELSAAPAPSQPAGAPAPSPASQQYIVVTVSEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIPVPQQALPTQRLVVQSTAPGGKGGQVSLTVHSTQQVHSPPERSPVQANSSSSKTAGAPTGTVPQQLQVHGAQQSVPVTQERSVVQATPQVPKAGPVQQLTVQGLQPVHVAQEVQQLQQVPVPHVYSSQVQYVEGGDASYTASAIRSSTYPYPETPLYTQTAGTSYYEAAGTAAQVSTPATSQAVASSGSVPMYVSGSQVVASSTSSGSAASNSGSGGSGGGGGGGGGSGGGSSSGSGAGTYVIQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGPQQATGLSDISAQVQQYQQFLDASRSLPDFSELDLQGKVLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGSESPALGPEALEPPAKLARTEARGLFVQALPSS", "length": 973, "header": "tr|F1SD60-1|F1SD60_PIG Isoform 1 of Regulatory factor X1 OS=Sus scrofa OX=9823 GN=RFX1 PE=4 SV=1 CANONICAL=F1SD60-1" }, "locus": { "chromosome": "2", "start_pos": 65204309, "end_pos": 65181008, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015038.3", "url": "https://www.ensembl.org/id/ENSSSCT00000015038.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014633.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014633.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SD60", "url": "https://www.uniprot.org/uniprotkb/F1SD60" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SD60", "url": "https://www.uniprot.org/uniprotkb/F1SD60" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SD60", "url": "https://www.uniprot.org/uniprotkb/F1SD60" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SD60", "url": "https://www.uniprot.org/uniprotkb/F1SD60" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SD60", "url": "https://www.uniprot.org/uniprotkb/F1SD60" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "F1SD60", "url": "https://www.uniprot.org/uniprotkb/F1SD60" } ], "pmid": "" }, { "name": "DNA-binding 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"end_pos": 65213518, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013763", "url": "https://www.ensembl.org/id/ENSSSCG00000013763" } ] } } ], "crossref": [ { "id": "F1SD61", "url": "https://alphafold.ebi.ac.uk/entry/F1SD61", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013763", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013763", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20913", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20913", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd20917", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20917", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511246", "url": "https://www.ncbi.nlm.nih.gov/gene/100511246", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR032734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038914", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038914", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047319", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047319", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511246", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511246", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QILYTKG", "url": "https://omabrowser.org/oma/group/QILYTKG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SD61", "url": "https://www.orthodb.org/?gene=F1SD61", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28541", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28541", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28541:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28541:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14939", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14939", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003123398", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123398", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SD61", "url": "https://www.uniprot.org/uniprotkb/F1SD61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD61-1", "url": "https://www.uniprot.org/uniprotkb/F1SD61-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPSSKSERNSGTGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDIYISTVAVPPPGRCAACRDASRAHPGDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVHSAGDSSFCQILYDHTTYPPGPPSPPGPQSPEMPPVPASLCPEAAPAQPSGAPEPSPAIAKAKEFVADIFRRAKEAKGGTSEEIRPPPCPGPSGSRCRLPSEPLAPGGEAVPRDSPPAAEVPAPEPGYVNYTKLYYVLGSGEGTEPEDEFEDDKISLPFVVTDLRGRNLRPMRERAAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFVTVSVGDLTEVKGQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL", "length": 600, "header": "tr|F1SD61-1|F1SD61_PIG Isoform 1 of DDB1 and CUL4 associated factor 15 OS=Sus scrofa OX=9823 GN=DCAF15 PE=4 SV=2 CANONICAL=F1SD61-1" }, "isoforms": [ { "isoform_ac": "F1SD61-1", "url": "https://www.uniprot.org/uniprotkb/F1SD61/entry#F1SD61-1", "sequence": { "sequence": "MAPSSKSERNSGTGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDIYISTVAVPPPGRCAACRDASRAHPGDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVHSAGDSSFCQILYDHTTYPPGPPSPPGPQSPEMPPVPASLCPEAAPAQPSGAPEPSPAIAKAKEFVADIFRRAKEAKGGTSEEIRPPPCPGPSGSRCRLPSEPLAPGGEAVPRDSPPAAEVPAPEPGYVNYTKLYYVLGSGEGTEPEDEFEDDKISLPFVVTDLRGRNLRPMRERAAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFVTVSVGDLTEVKGQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL", "length": 600, "header": "tr|F1SD61-1|F1SD61_PIG Isoform 1 of DDB1 and CUL4 associated factor 15 OS=Sus scrofa OX=9823 GN=DCAF15 PE=4 SV=2 CANONICAL=F1SD61-1" }, "locus": { "chromosome": "2", "start_pos": 65213480, "end_pos": 65206129, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015037.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015037.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014632.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014632.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SD61", "url": "https://www.uniprot.org/uniprotkb/F1SD61" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511246", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511246", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZFW6-1", "protein_name": "DDB1 and CUL4 associated factor 15", "gene_name": "Dcaf15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAPSSKSERNSGAGSAGGGPGGTGGKRAVGRRREHVLKQLERVKISGQLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDIYISTVAVPPRGRCAACQDASRAHPGDPSAQCLQHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVHSAGDSSFCQILYDHTALPPAPPSSPGPWSPEAPAFPSLGVEVAPAQPSGAPEPSPAIAKAKEFVADIFRRAKEAKGSVLEEARLPSGLGPSNSRCRPSLELPAPSGEVVPRASPPAAEPTAPEPGYINYTKLHYVLQSGEGTEPEDEFEDDKISLPFVVTDLRGRNLRPMRERTDMQLSAISPQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPAPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVKGQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL", "length": 606 }, "evidence": [ { "id": "F1SD61", "url": "https://omabrowser.org/oma/group/F1SD61/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E7F3Z0-1", "protein_name": "DDB1- and CUL4-associated factor 15", "gene_name": "dcaf15", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAPSSKSEKDDNKQKQPKKHKEHIIKLLTRGRLNGQLSQRLFRKLPPRVCVPLKTIVSEEFLRAGHIFLGFTKCGRYVLSYTSDCGEDDDFSFYTYHLYWWEFNLHSRLKQVHHVRLFAGEDIYSDLYLTVCEWHNDHSKLVIFGFNTRSSSSALMNMMMSDENNRDIYITITSMPPAQPCKQCCPVASSSTIRTGGECLEHGYVLNARYQVVYPFPTFQPALQLKKDQVILLNTSYSLVACAISLCTGDGQQESQNNQILYRKREPSSSSTSAPAGPTSPFSSSSASSQGSPDLRHSKPHVTPLSPSQSQAAVWAREFAADIFRRAQAGAREAERCKTKEKEETDTQRRLHDEERTRESPREVPGPSSSSSEPNQSSVVESGVCNAIVSPRSTSSVSSPSPHEQEPSSSSSSSEPAYVNYTTLRYRLPQATSVEQSNGEEDDKVQLPFTVTDLKGRPLQIVTGQYSGQFVCIEQLTLDFEYLINEVIRNDAEWGSQFCSFSDYDVVILEVCPETNIVVINIGLLLLAFSNCDDEHCRPKSYHSSLQVSWDLNTGACHTVGVGDLTEVKGQTSGSVWSSYRKSCVNTVMRWLVPESSSRYINRMTNEALHKGSSLQVLTDNDRGTWIVL", "length": 629 }, "evidence": [ { "id": "F1SD61", "url": "https://omabrowser.org/oma/group/F1SD61/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3SZD5-1", "protein_name": "DDB1- and CUL4-associated factor 15", "gene_name": "DCAF15", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMVMSDENHRDIYISTVAVPPPGRCAACRDASRAHPGDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVHSAGDSSFCQILYDHTTYPPAPPSPPGPQSPELPPVLPSLCPEAAPAWPSGPPDPSPAIAKAKEFVADIFRRAKEAKGGTSEEVRPPPCPGPSGSRCRLPSEPLGPGGEAVPRDSPPAAEAPAPEPGYVNYTKLYYVLGSGEGTEPEDEFEDDKISLPFVVTDLRGRNLRPMREQAVVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFVTVSVGDLTEVKGQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL", "length": 600 }, "evidence": [ { "id": "F1SD61", "url": "https://omabrowser.org/oma/group/F1SD61/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q66K64-1", "protein_name": "DDB1- and CUL4-associated factor 15", "gene_name": "DCAF15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAPSSKSERNSGAGSGGGGPGGAGGKRAAGRRREHVLKQLERVKISGQLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDIYVSTVAVPPPGRCAACQDASRAHPGDPNAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVHSAGDRSFCQILYDHSTCPLAPASPPEPQSPELPPALPSFCPEAAPARSSGSPEPSPAIAKAKEFVADIFRRAKEAKGGVPEEARPALCPGPSGSRCRAHSEPLALCGETAPRDSPPASEAPASEPGYVNYTKLYYVLESGEGTEPEDELEDDKISLPFVVTDLRGRNLRPMRERTAVQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPSPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVKGQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL", "length": 600 }, "evidence": [ { "id": "F1SD61", "url": "https://omabrowser.org/oma/group/F1SD61/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6PFH3-1", "protein_name": "DDB1- and CUL4-associated factor 15", "gene_name": "Dcaf15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAPSSKSERNSGAGSAGGGPGGTGGKRAVGRRREHVLKQLERVKISGQLSPRLFRKLPPRVCVSLKNIVDEDFLYAGHIFLGFSKCGRYVLSYTSSSGDDDFSFYIYHLYWWEFNVHSKLKLVRQVRLFQDEEIYSDLYLTVCEWPSDASKVIVFGFNTRSANGMLMNMMMMSDENHRDIYISTVAVPPRGRCAACQDASRAHPGDPSAQCLRHGFMLHTKYQVVYPFPTFQPAFQLKKDQVVLLNTSYSLVACAVSVHSAGDSSFCQILYDHTALPPAPPSSPGPWSPEAAPAFPSLGVEVVPAQPSGAPEPSPAIAKAKEFVADIFRRAKEAKGSPLEETRLPSSLGPSSSRCRPSLEPQAPSGEVVPRDSPPAAETTAPEPGYINYTKLHYVLQSGEGTEPEDEFEDDKISLPFVVTDLRGRNLRPMRERTDMQGQYLTVEQLTLDFEYVINEVIRHDATWGHQFCSFSDYDIVILEVCPETNQVLINIGLLLLAFPAPTEEGQLRPKTYHTSLKVAWDLNTGIFETVSVGDLTEVKGQTSGSVWSSYRKSCVDMVMKWLVPESSGRYVNRMTNEALHKGCSLKVLADSERYTWIVL", "length": 600 }, "evidence": [ { "id": "F1SD61", "url": "https://omabrowser.org/oma/group/F1SD61/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F1SD61", "url": "https://www.uniprot.org/uniprotkb/F1SD61" } ], "pmid": "" }, { "name": "protein polyubiquitination", "id": "GO:0000209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000209", "evidence": [ { "database": "UniProtKB", "id": "F1SD61", "url": "https://www.uniprot.org/uniprotkb/F1SD61" } ], "pmid": "" }, { "name": "regulation of natural killer cell activation", "id": "GO:0032814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032814", "evidence": [ { "database": "UniProtKB", "id": "F1SD61", "url": "https://www.uniprot.org/uniprotkb/F1SD61" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "small molecule binding", "id": "GO:0036094", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036094", "evidence": [ { "database": "UniProtKB", "id": "F1SD61", "url": "https://www.uniprot.org/uniprotkb/F1SD61" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Cul4-RING E3 ubiquitin ligase complex", "id": "GO:0080008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080008", "evidence": [ { "database": "UniProtKB", "id": "F1SD61", "url": "https://www.uniprot.org/uniprotkb/F1SD61" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 246, "end_pos": 248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 388, "end_pos": 390, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SD61-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 600, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SD61-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SD61" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SD61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD61" }, { "id": "PF14939", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14939" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DDB1- and CUL4-associated factor 15 WD40 repeat-containing", "eco_id": "ECO_0000259", "start_pos": 49, "end_pos": 259, "start_aa": "Leu", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 246, "end_pos": 248 }, { "start_pos": 388, "end_pos": 390 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SD83-1", "uniprot_ac": "F1SD83", "uniprot_id": "F1SD83_PIG", "mass": { "chemical_mass": 57560.0, "monoisotopic_mass": 57560.0 }, "refseq": { "ac": "XP_003123388", "name": "nucleus accumbens-associated protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123388" }, "gene_names": [ { "name": "NACC1", "type": "recommended", "evidence": [ { "id": "F1SD83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD83" } ] }, { "name": "NACC1", "type": "synonym", "evidence": [ { "id": 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"https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018379", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018379", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050457", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050457", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524850", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524850", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DMMSMEH", "url": "https://omabrowser.org/oma/group/DMMSMEH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SD83", "url": "https://www.orthodb.org/?gene=F1SD83", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46105", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46105", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46105:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46105:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10523", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10523", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003123388", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123388", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SD83", "url": "https://www.uniprot.org/uniprotkb/F1SD83", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD83-1", "url": "https://www.uniprot.org/uniprotkb/F1SD83-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNSSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNMGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSSWPACGTPLPLVSRVKTEQQESDSVQCTPVAKRLWDSGQKEAGGGSGSNGSRKMAKFSTPDLTANRAPQQPPVVAAAQPTGVAAGAGAGQSTGGAAAVAAAAAAGAVVSGPSTSERTSPGTSSAYTSDSPSSYHNEEDEEEDAGEEGTDEQYRQICNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSSNNPSRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWIPKVKPLMAEGDAYTTFISYTGKIEPDMMGVEHGFETASHDGEAGPSAEEALQ", "length": 534, "header": "tr|F1SD83-1|F1SD83_PIG Isoform 1 of Nucleus accumbens associated 1 OS=Sus scrofa OX=9823 GN=NACC1 PE=4 SV=1 CANONICAL=F1SD83-1" }, "isoforms": [ { "isoform_ac": "F1SD83-1", "url": "https://www.uniprot.org/uniprotkb/F1SD83/entry#F1SD83-1", "sequence": { "sequence": "MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNSSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNMGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHAEEAPSSEPQSPVAQTSSWPACGTPLPLVSRVKTEQQESDSVQCTPVAKRLWDSGQKEAGGGSGSNGSRKMAKFSTPDLTANRAPQQPPVVAAAQPTGVAAGAGAGQSTGGAAAVAAAAAAGAVVSGPSTSERTSPGTSSAYTSDSPSSYHNEEDEEEDAGEEGTDEQYRQICNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSSNNPSRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWIPKVKPLMAEGDAYTTFISYTGKIEPDMMGVEHGFETASHDGEAGPSAEEALQ", "length": 534, "header": "tr|F1SD83-1|F1SD83_PIG Isoform 1 of Nucleus accumbens associated 1 OS=Sus scrofa OX=9823 GN=NACC1 PE=4 SV=1 CANONICAL=F1SD83-1" }, "locus": { "chromosome": "2", "start_pos": 65926057, "end_pos": 65923133, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000015025.5", "url": "https://www.ensembl.org/id/ENSSSCT00000015025.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014620.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014620.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SD83", "url": "https://www.uniprot.org/uniprotkb/F1SD83" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524850", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524850", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LYW7-1", "protein_name": "Nucleus accumbens associated 1", "gene_name": "NACC1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNSSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNMGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHSEEAPSSEPQSPVAQTSSWPACGTPLPLVSRVKTEQQESDSVQCTPVAKRLWDSGQKEAGGSGGSNGSRKMAKFSTPDLAVNRPAQQAPVVAAAQPTGVAAGAGAGPPTGGAAAAAAAAGGVVSGPSTSERTSPGTSSAYTSDSPGSYHNEEDEEEDAGEEGTDEQYRQICNMYTMYSMMNVGQTAEKVEALPEQVAPESRNRIRVRQDLASLPAELINQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSSNNPSRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWIPKVKPLMAEGDAYTTFISYTGKIEPDMMGVEHGFETASHDGEAGPSAEEALQTVCLRGVPTPSPPWAEPLPTPGPVSEIAH", "length": 561 }, "evidence": [ { "id": "F1SD83", "url": "https://omabrowser.org/oma/group/F1SD83/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O35260-1", "protein_name": "Nucleus accumbens-associated protein 1", "gene_name": "Nacc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNSSRSAVVELPAAVQPQSFQQILTFCYTGRLSMNMGDQFLLIYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHPEEAPSSEPQSPVAQILGWPACSTPLPLVSRVKTEQELDSVQCTPMAKRLWDSSQKEAGGSGGNNGSRKMAKFSTPDLAPNRMPQPVSVATATAAVAVVAVGGCVSGPSMSERTSPGTSSAYTSDSPSSYHNEEDEEEDAGEEGTDEQYRQICNMYTMYSMLNVGQTVEKVEALPEQVVLESHSRIRVRQDLASLPAELINQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWLPKTKPLHLVEGDNYSSFISDTGKIEPDMMSMEHSFETASHDGEAGPSAEVLQ", "length": 514 }, "evidence": [ { "id": "F1SD83", "url": "https://omabrowser.org/oma/group/F1SD83/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TSZ8-1", "protein_name": "Nucleus accumbens-associated protein 1", "gene_name": "Nacc1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNSSRSAVVELPAAVQPQSFQQILTFCYTGRLSMNMGDQFLLIYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHPEEAPSSEPQSPVAQTLGWPACSTPLPLVSRVKTEQELDSVQCTPMAKRLWDSSQKEAGGSGGNNGSRKMAKFSTPDLALNRMPQPLSMATATAAVAVVAVGGCVSGPSMSERTSPGTSSAYTSDSPSSYHNEEDEEEDAGEEGTDEQYRQICNMYTMYSMLNVGQTAEKVEALPEQVVLESRSRIRVRQDLASLPAELINQIGNRCHPKLYDEGDPSEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSTNDPRRKPLDSRVLHAVKYYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWLPKTKPLHLVEGDNYSSFISDTCKIEPDMMSMEHSFETASHDGEAGPSAEVLQ", "length": 514 }, "evidence": [ { "id": "F1SD83", "url": "https://omabrowser.org/oma/group/F1SD83/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96RE7-1", "protein_name": "Nucleus accumbens-associated protein 1", 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"evidence": [ { "database": "UniProtKB", "id": "F1SD83", "url": "https://www.uniprot.org/uniprotkb/F1SD83" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SD83", "url": "https://www.uniprot.org/uniprotkb/F1SD83" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SD83", "url": "https://www.uniprot.org/uniprotkb/F1SD83" } ], "pmid": "" }, { "name": "positive regulation of cell population proliferation", "id": "GO:0008284", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008284", "evidence": [ { "database": "UniProtKB", "id": "F1SD83", "url": "https://www.uniprot.org/uniprotkb/F1SD83" } ], "pmid": "" }, { "name": "negative regulation of DNA-templated 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SD88-1", "uniprot_ac": "F1SD88", "uniprot_id": "F1SD88_PIG", "mass": { "chemical_mass": 55155.0, "monoisotopic_mass": 55155.0 }, "refseq": { "ac": "XP_001929018", "name": "tandem C2 domains nuclear protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929018" }, "gene_names": [ { "name": "TC2N", "type": "recommended", "evidence": [ { "id": "F1SD88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD88" } ] }, { "name": "TC2N", "type": "synonym", "evidence": [ { "id": "XP_001929018", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929018" } ] } ], "protein_names": [ { "name": "Tandem C2 domains nuclear protein", "type": "recommended", "evidence": [ { "id": "F1SD88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD88/entry#names_and_taxonomy" } ] }, { "name": "Membrane targeting tandem C2 domain-containing protein 1", "type": "synonym", "evidence": [ { "id": "F1SD88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD88/entry#names_and_taxonomy" } ] }, { "name": "Tandem C2 protein in nucleus", "type": "synonym", "evidence": [ { "id": "F1SD88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD88/entry#names_and_taxonomy" } ] }, { "name": "tandem C2 domains nuclear protein", "type": "synonym", "evidence": [ { "id": "XP_001929018", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929018" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SD88", "url": "https://www.uniprot.org/uniprotkb/F1SD88" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TC2N", "url": "https://www.uniprot.org/uniprotkb/F1SD88", "locus": { "chromosome": "7", "start_pos": 113337035, "end_pos": 113389588, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002443", "url": "https://www.ensembl.org/id/ENSSSCG00000002443" } ] } } ], "crossref": [ { "id": "ENSSSCG00000002443", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002443", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08684", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08684", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd08692", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08692", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100156455", "url": "https://www.ncbi.nlm.nih.gov/gene/100156455", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030542", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030542", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037786", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037786", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037788", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037788", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156455", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156455", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QSSARCT", "url": "https://omabrowser.org/oma/group/QSSARCT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SD88", "url": "https://www.orthodb.org/?gene=F1SD88", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46887", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46887", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46887:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46887:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001929018", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001929018", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ALG1", "url": "https://www.uniprot.org/uniprotkb/A0A287ALG1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ALG1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ALG1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1SQB3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SQB3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1SQB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1SQB3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD88", "url": "https://www.uniprot.org/uniprotkb/F1SD88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD88-1", "url": "https://www.uniprot.org/uniprotkb/F1SD88-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATEFIKSCCRGCFYGDPEKHNLSVERDFKAAVSNSHDTTICIPPLTSVSVKPQVGCTEDYLLSKLPSDGKEVPFVVPKFKLAYIQPRTQGTPSHLEELEGSARASFVDRKVELSSSSQHGPSYDVYNPFYMYQHVSPDLSRRFPPHSEATRLYGSVCDLRTNRLPSSPGLSKSMFDLTSSSQRFIQRHDSLSSVPSSSSSRKNSQGSNRSLDTITLSGDERDLGRLNVKVFYNSSVEQIWITILQCRDLSWPSSYGDTPTLSIKGILTLPKPVHFKSSVKEGSSNIEFMETFVFAIKLQNLQTVRLVFKIQTQTPRKKTIGECSLSLRTLSTQEMDYSLDISPPSKISVCHAELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVAMFSSGELIYKKKTRLLKASSGRVKWGETMIFPLIQNEKEIIFLVKLYSRSSVGRRHFVGQIWISEDSNNIEAVNQWKETITNPEKVVIKWHKLNPS", "length": 490, "header": "tr|F1SD88-1|F1SD88_PIG Isoform 1 of Tandem C2 domains nuclear protein OS=Sus scrofa OX=9823 GN=TC2N PE=4 SV=1 CANONICAL=F1SD88-1" }, "isoforms": [ { "isoform_ac": "A0A287ALG1-1", "url": "https://www.uniprot.org/uniprotkb/F1SD88/entry#A0A287ALG1-1", "sequence": { "sequence": "MATEFIKSCCRGCFYGDPEKHNLSVERDFKAAVSNSHDTTICIPPLTSVSVKPQVGCTEDYLLSKLPSDGKEVPFVVPKFKLAYIQPRTQGTPSHLEELEGSARASFVDRKVELSSSSQHGPSYDVYNPFYMYQHVSPDLSRRFPPHSEATRLYGSVCDLRTNRLPSSPGLSKSMFDLTSSSQRFIQRHDSLSSVPSSSSSRKNSQGSNRSLDTITLSGDERDLGRLNVKVFYNSSVEQIWITILQNIEFMETFVFAIKLQNLQTVRLVFKIQTQTPRKKTIGECSLSLRTLSTQEMDYSLDISPPSKISVCHAELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVAMFSSGELIYKKKTRLLKASSGRVKWGETMIFPLIQNEKEIIFLVKLYSRSSVGRRHFVGQIWISEDSNNIEAVNQWKETITNPEKVVIKWHKLNPS", "length": 451, "header": "tr|A0A287ALG1-1|A0A287ALG1_PIG Computationally mapped isoform of Tandem C2 domains nuclear protein OS=Sus scrofa OX=9823 GN=TC2N PE=4 SV=1 CANONICAL=F1SD88-1" }, "locus": { "chromosome": "7", "start_pos": 113371697, "end_pos": 113340196, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039469.2", "url": "https://www.ensembl.org/id/ENSSSCT00000039469.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044739.2", "url": "https://www.ensembl.org/id/ENSSSCP00000044739.2" } ] } }, { "isoform_ac": "A0A4X1SQB3-1", "url": "https://www.uniprot.org/uniprotkb/F1SD88/entry#A0A4X1SQB3-1", "sequence": { "sequence": "MATEFIKSCCRGCFYGDPEKHNLSVERDFKAAVSNSHDTTICIPPLTSVSVKPQVGCTEDYLLSKLPSDGKEVPFVVPKFKLAYIQPRTQGTPSHLEELEGSARASFVDRKVELSSSSQHGPSYDVYNPFYMYQHVSPDLSRRFPPHSEATRLYGSVCDLRTNRLPSSPGLSKSMFDLTSSSQRFIQRHDSLSSVPSSSSSRKNSQGSNRSLDTITLSGDERDLGRLNVKVFYNSSVEQIWITILQCRDLSWPSSYGDTPTLSIKGILTLPKPVHFKSSVKEGSSVCHAELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVAMFSSGELIYKKKTRLLKASSGRVKWGETMIFPLIQNEKEIIFLVKLYSRSSVGRRHFVGQIWISEDSNNIEAVNQWKETITNPEKVVIKWHKLNPS", "length": 426, "header": "tr|A0A4X1SQB3-1|A0A4X1SQB3_PIG Computationally mapped isoform of Tandem C2 domains nuclear protein OS=Sus scrofa OX=9823 GN=TC2N PE=4 SV=1 CANONICAL=F1SD88-1" }, "locus": { "chromosome": "7", "start_pos": 113371697, "end_pos": 113340196, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067912.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067912.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063119.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063119.1" } ] } }, { "isoform_ac": "F1SD88-1", "url": "https://www.uniprot.org/uniprotkb/F1SD88/entry#F1SD88-1", "sequence": { "sequence": "MATEFIKSCCRGCFYGDPEKHNLSVERDFKAAVSNSHDTTICIPPLTSVSVKPQVGCTEDYLLSKLPSDGKEVPFVVPKFKLAYIQPRTQGTPSHLEELEGSARASFVDRKVELSSSSQHGPSYDVYNPFYMYQHVSPDLSRRFPPHSEATRLYGSVCDLRTNRLPSSPGLSKSMFDLTSSSQRFIQRHDSLSSVPSSSSSRKNSQGSNRSLDTITLSGDERDLGRLNVKVFYNSSVEQIWITILQCRDLSWPSSYGDTPTLSIKGILTLPKPVHFKSSVKEGSSNIEFMETFVFAIKLQNLQTVRLVFKIQTQTPRKKTIGECSLSLRTLSTQEMDYSLDISPPSKISVCHAELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVAMFSSGELIYKKKTRLLKASSGRVKWGETMIFPLIQNEKEIIFLVKLYSRSSVGRRHFVGQIWISEDSNNIEAVNQWKETITNPEKVVIKWHKLNPS", "length": 490, "header": "tr|F1SD88-1|F1SD88_PIG Isoform 1 of Tandem C2 domains nuclear protein OS=Sus scrofa OX=9823 GN=TC2N PE=4 SV=1 CANONICAL=F1SD88-1" }, "locus": { "chromosome": "7", "start_pos": 113371697, "end_pos": 113340196, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002713.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002713.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002644.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002644.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SD88", "url": "https://www.uniprot.org/uniprotkb/F1SD88" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156455", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156455", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MUQ1-1", "protein_name": "Tandem C2 domains nuclear protein", "gene_name": "Tc2n", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAEFLKSCCRGCFYGETEKHKFSVEREFKASVSNSQNTICTPPLTSVSVKSQVGCSEDYLLSKLPCDGKEVPFVVPRFKLSYIQPRTQGTPSHLDELEGSARASFGDQKAELCSSFYHGPSYDVYNPCYMYQHFSPDISRRFSPHFETKKMYGSVCDLRTSKLPGSPGLSKSMFDLTTSPQRFIQRHDSLSSVPSSSSSRKNSQGSNRSLDTITLSGDERDLGRLNVKLFYNSSAEQIWITVLQCRDVIWPSNYGDTPTISIKGILTLSKPVHFKSSAKEGSNAIEFMETFVFAIKLQNLQTVRLVFKIQTQTPRKKTIGECSLSLRTLSTQEMDYSLEIIPPSKISVCHSELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVGMFSSGELIYKKKTRLLKASSGRVKWGETMIFPLTQTEKEIVFLVKLYSRSSVRRKHFVGQLWISEDSNNTEAVNQWKETITNPEKVVIKWHKLNPS", "length": 489 }, "evidence": [ { "id": "F1SD88", "url": "https://omabrowser.org/oma/group/F1SD88/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0YYB4-1", "protein_name": "Tandem C2 domains, nuclear", "gene_name": "TC2N", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MANEYIKNCCKWCFYVEKEKSNSVSMAQESEAVPASKPTIVEQPPLSSVSVKRQVGCSEDYLLSKLPLDGQEVPFVVPPFKLAYVQPKSHPSTSHAGGIQESARASFGDRKAELCGVYQWPRYDVYNPFYLEHHVSPDQIRRFQAKSDNRKLYGSVSDLRTSALPGSLDLSHSMFDLRSPPHRFMKRYDSVSSVPSSTSSRKDSHGSNRSLDTITLSGDERDFGRLNVKLCYVPSVEQIWITVLHCKGLSWPSGCGENPRIYVKGILTLPKPVQFKSSAKEGSNDIEFMETFVFAIKLQSVQAVRLVFKIQMQTPRKRTIGECSLSLRELSSEESNHWLDISPPSKAPVCRTELQIGTCFQAINRRIQLQILEAQNLPISSTPLSLSFFVKVGMFSTEGLIYKKKTRLVKSTNGQVKWREMMIFPVSQAEQGIGFLIKLYSRSSVRRKHFLGQVWISSDSNNSEAVEQWEDTIANPEKVVIKWYSLGPS", "length": 489 }, "evidence": [ { "id": "F1SD88", "url": "https://omabrowser.org/oma/group/F1SD88/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8N9U0-1", "protein_name": "Tandem C2 domains nuclear protein", "gene_name": "TC2N", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATEFIKSCCGGCFYGETEKHNFSVERDFKAAVPNSQNATISVPPLTSVSVKPQLGCTEDYLLSKLPSDGKEVPFVVPKFKLSYIQPRTQETPSHLEELEGSARASFGDRKVELSSSSQHGPSYDVYNPFYMYQHISPDLSRRFPPRSEVKRLYGSVCDLRTNKLPGSPGLSKSMFDLTNSSQRFIQRHDSLSSVPSSSSSRKNSQGSNRSLDTITLSGDERDFGRLNVKLFYNSSVEQIWITVLQCRDLSWPSSYGDTPTVSIKGILTLPKPVHFKSSAKEGSNAIEFMETFVFAIKLQNLQTVRLVFKIQTQTPRKKTIGECSMSLRTLSTQEMDYSLDITPPSKISVCHAELELGTCFQAVNSRIQLQILEARYLPSSSTPLTLSFFVKVGMFSSGELIYKKKTRLLKASNGRVKWGETMIFPLIQSEKEIVFLIKLYSRSSVRRKHFVGQIWISEDSNNIEAVNQWKETVINPEKVVIRWHKLNPS", "length": 490 }, "evidence": [ { "id": "F1SD88", "url": "https://omabrowser.org/oma/group/F1SD88/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q91XT6-1", "protein_name": "Tandem C2 domains nuclear protein", "gene_name": "Tc2n", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAEFIKSCCRGCLYGETEKQKFSVDRDFKASASSSQNTIGIPPLTSVLVKPQVGCNEDYLLSKLPCDGKEVQFVVPRFKLSYIQPRTQGIPSHLDELEGSARASFGDQKTELCSSFYHGPSYDVYNPCYMYQHFSPDLSRRFLPHCETKQLYGSVCDLRTSKLPGSSGLSKSMLDLTTSSQRFIQRHDSFSSVPSSSSSRKNSQGSNRSLDTITLSGDERDLGRLNVKLFYNSSAEQIWITVLQCRDISWPSSYGDTPTISIKGILTLSKPVHFKSSAKEGSNAIEFMETFVFAIKLQNLQAVRLAFKIQTQTPKKKTIGECSLSLRTLSTQEMEYSLEIIAPSKISVCQAELELGTCFQAVNSRIQLQILEAQYLPSSSTPLTLSFFVKVGMFSSGELIYKKKTRLLKASSGRVKWGETMIFPLIQTEKEIVFLIKLYSRSSVRRKHFVGQLWISEDSNNIEAVNQWKETITNPEKVVIKWHKLNPS", "length": 489 }, "evidence": [ { "id": "F1SD88", "url": "https://omabrowser.org/oma/group/F1SD88/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SD88", "url": "https://www.uniprot.org/uniprotkb/F1SD88" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 209, "end_pos": 211, "annotation": "n_glycosylation_sequon" }, { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" }, { "start_pos": 234, "end_pos": 236, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SD88", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SD88" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 223, "end_pos": 342, "start_aa": "Asp", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 209, "end_pos": 211 }, { "start_pos": 22, "end_pos": 24 }, { "start_pos": 234, "end_pos": 236 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDA4-1", "uniprot_ac": "F1SDA4", "uniprot_id": "F1SDA4_PIG", "mass": { "chemical_mass": 94210.0, "monoisotopic_mass": 94210.0 }, "refseq": { "ac": "XP_020955268", "name": "tetratricopeptide repeat protein 7B isoform X5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955268" }, "gene_names": [ { "name": "TTC7B", "type": "recommended", "evidence": [ { "id": "F1SDA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDA4" } ] }, { "name": "TTC7B", "type": "synonym", "evidence": [ { "id": "XP_020955268", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955268" } ] } ], "protein_names": [ { "name": "Tetratricopeptide repeat protein 7B", "type": "recommended", "evidence": [ { "id": "F1SDA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDA4/entry#names_and_taxonomy" } ] }, { "name": "tetratricopeptide repeat protein 7B isoform X5", "type": "synonym", "evidence": [ { "id": "XP_020955268", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955268" } ] } ], "function": [ { "annotation": "Component of a complex required to localize phosphatidylinositol 4-kinase (PI4K) to the plasma membrane. The complex acts as a regulator of phosphatidylinositol 4-phosphate (PtdIns(4)P) synthesis. In the complex, plays a central role in bridging PI4KA to EFR3B and HYCC1, via direct interactions.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R8K1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8K1#function" }, { "database": "UniProtKB", "id": "ARBA00054379", "url": "https://www.uniprot.org/uniprotkb/ARBA00054379#function" }, { "database": "UniProtKB", "id": "A0A287BK91", "url": "https://www.uniprot.org/uniprotkb/A0A287BK91#function" }, { "database": "UniProtKB", "id": "A0A287BAT9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAT9#function" }, { "database": "UniProtKB", "id": "A0A287ADK4", "url": "https://www.uniprot.org/uniprotkb/A0A287ADK4#function" }, { "database": "UniProtKB", "id": "I3L783", "url": "https://www.uniprot.org/uniprotkb/I3L783#function" }, { "database": "UniProtKB", "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TTC7B", "url": "https://www.uniprot.org/uniprotkb/F1SDA4", "locus": { "chromosome": "7", "start_pos": 112270164, "end_pos": 112519191, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002436", "url": "https://www.ensembl.org/id/ENSSSCG00000002436" } ] } } ], "crossref": [ { "id": "F1SDA4", "url": "https://alphafold.ebi.ac.uk/entry/F1SDA4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000002436", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002436", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154890", "url": "https://www.ncbi.nlm.nih.gov/gene/100154890", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045819", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045819", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051722", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051722", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154890", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154890", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EYYLACQ", "url": "https://omabrowser.org/oma/group/EYYLACQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BK91", "url": "https://www.orthodb.org/?gene=A0A287BK91", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23083", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23083", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23083:SF365", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23083:SF365", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12895", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12895", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13181", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13181", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13424", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13424", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19440", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19440", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020955268", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020955268", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ADK4", "url": "https://www.uniprot.org/uniprotkb/A0A287ADK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ADK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ADK4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAT9", "url": "https://www.uniprot.org/uniprotkb/A0A287BAT9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAT9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAT9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BK91", "url": "https://www.uniprot.org/uniprotkb/A0A287BK91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BK91-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BK91-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8K1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8K1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8K1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8K1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDA4-1", "url": "https://www.uniprot.org/uniprotkb/F1SDA4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L783", "url": "https://www.uniprot.org/uniprotkb/I3L783", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L783-1", "url": "https://www.uniprot.org/uniprotkb/I3L783-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLDYVEGDYEAALRIYARVGLEDWPLTGVPPYRLRMAADAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYALTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNIDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 843, "header": "tr|F1SDA4-1|F1SDA4_PIG Isoform 1 of Tetratricopeptide repeat protein 7B OS=Sus scrofa OX=9823 GN=TTC7B PE=1 SV=3 CANONICAL=F1SDA4-1" }, "isoforms": [ { "isoform_ac": "A0A287ADK4-1", "url": "https://www.uniprot.org/uniprotkb/F1SDA4/entry#A0A287ADK4-1", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLDYVEGDYEAALRIYARVGLEDWPLTGVPPYRLRMAADAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYALTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGNSPEVYFHGFPSLFSVSSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNIDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 860, "header": "tr|A0A287ADK4-1|A0A287ADK4_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 7B OS=Sus scrofa OX=9823 GN=TTC7B PE=1 SV=1 CANONICAL=F1SDA4-1" }, "locus": { "chromosome": "7", "start_pos": 112519023, "end_pos": 112270891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042345.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042345.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041886.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041886.1" } ] } }, { "isoform_ac": "A0A287BAT9-1", "url": "https://www.uniprot.org/uniprotkb/F1SDA4/entry#A0A287BAT9-1", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYALTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNIDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 735, "header": "tr|A0A287BAT9-1|A0A287BAT9_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 7B OS=Sus scrofa OX=9823 GN=TTC7B PE=1 SV=1 CANONICAL=F1SDA4-1" }, "locus": { "chromosome": "7", "start_pos": 112519023, "end_pos": 112270891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037153.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037153.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053620.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053620.1" } ] } }, { "isoform_ac": "A0A287BK91-1", "url": "https://www.uniprot.org/uniprotkb/F1SDA4/entry#A0A287BK91-1", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLDYVEGDYEAALRIYARVGLEDWPLTGVPPYRLRMAADAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYALTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETVSDSSSSSSLSRTESPLHLFVSSHLHSPPKPDTFVWPPAPHAVSDPGPRQEPSLCNSPEVYFHGFPSLFSVSSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNIDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 914, "header": "tr|A0A287BK91-1|A0A287BK91_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 7B OS=Sus scrofa OX=9823 GN=TTC7B PE=1 SV=1 CANONICAL=F1SDA4-1" }, "locus": { "chromosome": "7", "start_pos": 112519023, "end_pos": 112270891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055754.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055754.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056816.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056816.1" } ] } }, { "isoform_ac": "A0A5G2R8K1-1", "url": "https://www.uniprot.org/uniprotkb/F1SDA4/entry#A0A5G2R8K1-1", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLDYVEGDYEAALRIYARVGLEDWPLTGVPPYRLRMAADAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYALTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETVSDSSSSSSLSRTESPLHLFVSSHLHSPPKPDTFVWPPAPHAVSDPGPRQEPSLCSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNIDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 897, "header": "tr|A0A5G2R8K1-1|A0A5G2R8K1_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 7B OS=Sus scrofa OX=9823 GN=TTC7B PE=1 SV=1 CANONICAL=F1SDA4-1" }, "locus": { "chromosome": "7", "start_pos": 112519023, "end_pos": 112270891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087630.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087630.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073416.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073416.1" } ] } }, { "isoform_ac": "F1SDA4-1", "url": "https://www.uniprot.org/uniprotkb/F1SDA4/entry#F1SDA4-1", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLDYVEGDYEAALRIYARVGLEDWPLTGVPPYRLRMAADAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYALTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNIDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 843, "header": "tr|F1SDA4-1|F1SDA4_PIG Isoform 1 of Tetratricopeptide repeat protein 7B OS=Sus scrofa OX=9823 GN=TTC7B PE=1 SV=3 CANONICAL=F1SDA4-1" }, "locus": { "chromosome": "7", "start_pos": 112519023, "end_pos": 112270891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002706.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002706.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002637.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002637.3" } ] } }, { "isoform_ac": "I3L783-1", "url": "https://www.uniprot.org/uniprotkb/F1SDA4/entry#I3L783-1", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLDYVEGDYEAALRIYARVGLEDWPLTGVPPYRLRMAADAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYALTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFIDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNIDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 804, "header": "tr|I3L783-1|I3L783_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 7B OS=Sus scrofa OX=9823 GN=TTC7B PE=1 SV=2 CANONICAL=F1SDA4-1" }, "locus": { "chromosome": "7", "start_pos": 112519023, "end_pos": 112270891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031028.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031028.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019887.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019887.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154890", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154890", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MGB6-1", "protein_name": "Tetratricopeptide repeat protein 7B", "gene_name": "TTC7B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MATRKAGSRLETEIERCRSESQWERIPELARQLSAKLIAHDDMAELLLGEAKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESSLVLAKLHYVEGDCEGALRLYARAGLEDWPLTGAPPYRLRMAAEAYATQGLCLEKLPISSSTSSLRVDREQDIITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGSLTRGVGRFRELLRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYTLTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCVGSLHWLEEAEKFAKTVVDAGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLSRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSIHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNVDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTVIPRAL", "length": 843 }, "evidence": [ { "id": "F1SDA4", "url": "https://omabrowser.org/oma/group/F1SDA4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8I6A7F1-1", "protein_name": "Tetratricopeptide repeat protein 7B", "gene_name": "Ttc7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQHLKEKPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLVMAKLNYVEGDYKEALNIYARVGLDDLPLMAVPPYRLRMIAEAYATKGLCLEKLPVSSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILTNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFRELLRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEEPPCQSPLDDPLRKGANTKTYTLPRRARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCVGSLHWLEEAEKFAKTVVDVGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLALQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHHHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETVSDSSSSSSISRTESPLHLFVSSPLHSHPKPDIFVWPPAAHSLSDPGPHREPSLCNSPEAHFHGFPSLFSVSSVHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNFDEARRWYEEALSISPTHVKSMQRLALVLHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTVIPRVL", "length": 914 }, "evidence": [ { "id": "F1SDA4", "url": "https://omabrowser.org/oma/group/F1SDA4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E9Q6P5-1", "protein_name": "Tetratricopeptide repeat protein 7B", "gene_name": "Ttc7b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATRKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQHLKEKPLRQGASPRGPRPQLTEVRKHLTAALDRGNLKSEFLQESNLVMAKLTYVEGDYKEALNIYARVGLDDLPLTAVPPYRLRMIAEAYATKGLCLEKLPVSSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVMLTNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFRELLRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWSPLEEPPYQSPLDDPLRKGANTKAYTLPRRARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCVGSLHWLEEAEKFAKTVVDVGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEGLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSVHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGHFDEARRWYEEALSISPTHVKSMQRLALVLHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTVIPRVL", "length": 843 }, "evidence": [ { "id": "F1SDA4", "url": "https://omabrowser.org/oma/group/F1SDA4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q86TV6-1", "protein_name": "Tetratricopeptide repeat protein 7B", "gene_name": "TTC7B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATKKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANDDMAELLLGESKLEQYLKEHPLRQGASPRGPKPQLTEVRKHLTAALDRGNLKSEFLQESNLIMAKLNYVEGDYKEALNIYARVGLDDLPLTAVPPYRLRVIAEAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILSNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFRELLRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYTLTRRARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKSDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDVGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKLQSLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGSVHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASSPAVPFTIIPRVL", "length": 843 }, "evidence": [ { "id": "F1SDA4", "url": "https://omabrowser.org/oma/group/F1SDA4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CB03-1", "protein_name": "Protein NPGR1", "gene_name": "NPGR1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MLCACSGEQFRFEDQPGSPESLATRDFSASGLSSRNGGGDWDSKLEDIQVDEAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFKGIDIKVLTPRIIKAIVEKTLPCKPRSKAVIVPPTTMSMHSVSLLLEAILLKARSLEELGSYKEAAEECKIILDVVENALPSGMPDGISGFAKLQDIFQKALELLPLLWKKAGNHHETIASYRRALSRPWNLDPQRLAVTQKSLALVLLYGSVEACPKDNIEEAIVLLMLLVKKMVVGDIQWDPELMDHLTYALSMTGQFEVLANYLEQTLPGVYTRGERWYLLSLCYSAAGIDKAAINLLKMALGPSESRQIPHIPLLLFGAKLCSKDPKHSRDGINFAHRLLDLGNSQSEHLLSQAHKFLGVCYGNAARSSKLDSERVFLQKKSLFSLNEAAKRGKADPELDVIFNLSVENAVQRNVQAALDGAVEYSSMVGGVSTKGWKHLAIVLSAEKRLKDAESILDFTMEEAGDIEKIELLRLKAVLQMAQEQPKKAMKTCSSLLGLIRAQEKSEQSESLLQKFETEAWQDLASVYGKLGSWSDAETCLEKARSMCYYSPRGWNETGLCLEAKSLHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAYELELSAPVQSFI", "length": 694 }, "evidence": [ { "id": "F1SDA4", "url": "https://omabrowser.org/oma/group/F1SDA4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein localization to plasma membrane", "id": "GO:0072659", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072659", "evidence": [ { "database": "UniProtKB", "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4" } ], "pmid": "" }, { "name": "phosphatidylinositol phosphate biosynthetic process", "id": "GO:0046854", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046854", "evidence": [ { "database": "UniProtKB", "id": "F1SDA4", "url": "https://www.uniprot.org/uniprotkb/F1SDA4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 200, "end_pos": 202, "annotation": "n_glycosylation_sequon" }, { "start_pos": 234, "end_pos": 236, "annotation": "n_glycosylation_sequon" }, { "start_pos": 618, "end_pos": 620, "annotation": "n_glycosylation_sequon" }, { "start_pos": 794, "end_pos": 796, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SDA4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 843, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SDA4-F1.pdb", "url_external": 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"field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDE0-1", "uniprot_ac": "F1SDE0", "uniprot_id": "F1SDE0_PIG", "mass": { "chemical_mass": 108192.0, "monoisotopic_mass": 108192.0 }, "refseq": { "ac": "XP_003125839", "name": "ankyrin repeat domain-containing protein 35 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125839" }, "gene_names": [ { "name": "ANKRD35", "type": "recommended", "evidence": [ { "id": "F1SDE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDE0" } ] }, { "name": "ANKRD35", "type": "synonym", "evidence": [ { "id": "XP_003125839", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125839" } ] } ], "protein_names": [ { "name": "Ankyrin repeat domain 35", "type": "synonym", "evidence": [ { "id": "F1SDE0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDE0/entry#names_and_taxonomy" } ] }, { "name": "ankyrin repeat domain-containing protein 35 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003125839", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125839" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDE0", "url": "https://www.uniprot.org/uniprotkb/F1SDE0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ANKRD35", "url": "https://www.uniprot.org/uniprotkb/F1SDE0", "locus": { "chromosome": "4", "start_pos": 99460868, "end_pos": 99442901, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006688", "url": "https://www.ensembl.org/id/ENSSSCG00000006688" } ] } } ], "crossref": [ { "id": "F1SDE0", "url": "https://alphafold.ebi.ac.uk/entry/F1SDE0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006688", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006688", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511691", "url": "https://www.ncbi.nlm.nih.gov/gene/100511691", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042420", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042420", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511691", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511691", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QVAVESW", "url": "https://omabrowser.org/oma/group/QVAVESW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SDE0", "url": "https://www.orthodb.org/?gene=F1SDE0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24129", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24129", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24129:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24129:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003125839", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125839", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SDE0", "url": "https://www.uniprot.org/uniprotkb/F1SDE0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDE0-1", "url": "https://www.uniprot.org/uniprotkb/F1SDE0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKRIFSCSSSQVAVERWNRRDQKLLEAVQRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECLTILLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDVENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNGGRTPLMIASLGGHAAICSQLLQRGARVNITDKNDKSALILACEKGSAEVAELLLSHGADAGAVDSTGHDALHYALRTQDKTLWRLLRQALNRQGRGGQGLVQHSDLASQASPSEPQVGSPPWRAEPEEEQEEEEDEDPCPEEWKWKYEEEQRKVSQLEQELMRKTEESKAQAAAYLGLENQIQEQVQELGLLLSQEPGAPGGQSSSLRAGGDGMEQGCPLDLLAKGIQELRKQQQAAATAAANPVLASKKAKDSAPGEIPYAAHGRSQPEEQGTPQSPKSDATGEAKEQQLATSGGQDLGPDHTRQLCAGQEERRQAPGAEPAGTAAMNQLLLQLREELAAVWREKDAARGALSRPVLEGALGTPRAEAAAAAWEKMEARLERVLVRLDQAKAGLQMKPEAPAQKPREGTSKAGPGTVIKGNEGREDRSPGTWGKPLGAPGGEQMLGGGLAKGQLEKEVSALRLSNSNLLEELGELGRERQRLQGELQSLSQRLQLEFVPKPEAQVQLQQLQRSVGLLTDELAIEKEATEKLRKRLASQSSGLQGLWDCLPADLVGKGSAQSTSGEPLEELQACIRTLVDKHLEAQQVMARLEEENQQLRGSLAPRGEPGTSSEASASPQVAALEEDLGKLEEELRAVQATMSGKSQEIGKLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKALLEKYNTACREMSRLREAVAEERRRSGDLAARVAEQERQASEMRGRSEQFEKTAELLKEKVEHLIGACRDKEAKIKELLKKLEQLSEDVLAVRGKNARLALQLQDSQKNHEEIIATYRNHLLSAAQGYMEQDVYNILLRILSIQEE", "length": 995, "header": "tr|F1SDE0-1|F1SDE0_PIG Isoform 1 of Ankyrin repeat domain 35 OS=Sus scrofa OX=9823 GN=ANKRD35 PE=4 SV=1 CANONICAL=F1SDE0-1" }, "isoforms": [ { "isoform_ac": "F1SDE0-1", "url": "https://www.uniprot.org/uniprotkb/F1SDE0/entry#F1SDE0-1", "sequence": { "sequence": "MKRIFSCSSSQVAVERWNRRDQKLLEAVQRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECLTILLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDVENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNGGRTPLMIASLGGHAAICSQLLQRGARVNITDKNDKSALILACEKGSAEVAELLLSHGADAGAVDSTGHDALHYALRTQDKTLWRLLRQALNRQGRGGQGLVQHSDLASQASPSEPQVGSPPWRAEPEEEQEEEEDEDPCPEEWKWKYEEEQRKVSQLEQELMRKTEESKAQAAAYLGLENQIQEQVQELGLLLSQEPGAPGGQSSSLRAGGDGMEQGCPLDLLAKGIQELRKQQQAAATAAANPVLASKKAKDSAPGEIPYAAHGRSQPEEQGTPQSPKSDATGEAKEQQLATSGGQDLGPDHTRQLCAGQEERRQAPGAEPAGTAAMNQLLLQLREELAAVWREKDAARGALSRPVLEGALGTPRAEAAAAAWEKMEARLERVLVRLDQAKAGLQMKPEAPAQKPREGTSKAGPGTVIKGNEGREDRSPGTWGKPLGAPGGEQMLGGGLAKGQLEKEVSALRLSNSNLLEELGELGRERQRLQGELQSLSQRLQLEFVPKPEAQVQLQQLQRSVGLLTDELAIEKEATEKLRKRLASQSSGLQGLWDCLPADLVGKGSAQSTSGEPLEELQACIRTLVDKHLEAQQVMARLEEENQQLRGSLAPRGEPGTSSEASASPQVAALEEDLGKLEEELRAVQATMSGKSQEIGKLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKALLEKYNTACREMSRLREAVAEERRRSGDLAARVAEQERQASEMRGRSEQFEKTAELLKEKVEHLIGACRDKEAKIKELLKKLEQLSEDVLAVRGKNARLALQLQDSQKNHEEIIATYRNHLLSAAQGYMEQDVYNILLRILSIQEE", "length": 995, "header": "tr|F1SDE0-1|F1SDE0_PIG Isoform 1 of Ankyrin repeat domain 35 OS=Sus scrofa OX=9823 GN=ANKRD35 PE=4 SV=1 CANONICAL=F1SDE0-1" }, "locus": { "chromosome": "4", "start_pos": 99460104, "end_pos": 99443277, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007327.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007327.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007132.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007132.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDE0", "url": "https://www.uniprot.org/uniprotkb/F1SDE0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511691", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511691", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1NFX8-1", "protein_name": "Ankyrin repeat domain 35", "gene_name": "ANKRD35", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKRIFSCSSSQVAVERWNRRDQKLLEAVQRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECLTILLASGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKNDKSALILACEKGSAEVAELLLSHGADAGAVDSTGHDALHYALRTQDRPLWRLLRQALNRQGRGGQGPVQHLNPASQTSPSEPQVGAPPKSPWRAEPEEEQEEEEDEDPCSEEWKWKYEEEKRKVSQLEQELLRKTEECKAQATAYLGLENQIQEQVRELGLLLSQEPRAPENQGSSLRHGGDGMEQGCALNLLAKHIQELKKHQQATAAAAANPVLASKKAEDSVPGEIQYEAQGRSQPEEQEPPQSPKSETVGKTTGQQLTNSDGQALRLDQTDQLFAGRKERPQAPGSEPTSTVAEPAGTAAMNQLLLQLREELAAVWREKDAARGALSRSVLEGALGTPRAEAAAAAWEKMEARLEQVLVRLDRAKAGLQMKPKAPAQEPREEAPKALPGTITQEDEEKEKRVPGARGEPLGAPGGDQMPGGGQARGQLEKEVSALRLSNSNLLEELGELGRERQRLQGELQSLSQRLQQEFVPRPEAQDQLQQLRRSVGLLTDELALEKQATEKLRKRLASQNRGLQGLWDCLPPDLVGQGSARSAAAEPLEDLQACISALVARHREAQQGLARLEEENQQLRGSPSRLGEPGVSSEASASPQVAALEQDLGKLEEELRAVQATMSGKSQEIWKLKQLLYQATEEVEELRAREAASLRQHEKTRGSLVAQAQAWGQELKALLEKYNTACREMGRLREAAAEERRRSGDLAARAAEHERQASEMRGRSQQFEKTAELLKEKVEHLIGACRDKEAKIKELLKKLEQLSEEVLAVRGDNARLALQLQDSQKNHEEIISTYRKHLLNAAQGYMEQDVYNILLRILSIQE", "length": 1004 }, "evidence": [ { "id": "F1SDE0", "url": "https://omabrowser.org/oma/group/F1SDE0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0LIT4-1", "protein_name": "Ankyrin repeat domain 35", "gene_name": "Ankrd35", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKRIFSCSSSQVAVEKWNRRDQKLLEAVQRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECLTILLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKDDKSALILACEKGSAEVAELLLSHGADAGAVDSLGHNALHYALGTQDRELWRLLQQALNRRRRGGRELVQHPDHASQASSSESPWRAEPEEEQEEEKGEERGSEEWRWKFEEEQRKVHQLEQELLQKTDECKARAAAFVSLENQIREQVQELGYLLVQVPGAPRNQGPGLRPEGDGMEQGCPLNLLAEWIQELKKQQKATATINPTLVPKRAEDLAPAETHYEVPGKFQPEQGLSQSPRSETIGKATGQQLNTNGEQNLDLDNTEQVCADQKERALAPGTEPAVTVGEPVGIAAMNQLLLQLREELAAVWREKDAARGALSRPVLEGALGTPRAEAAAAAWEKMEARLEKVLVRLDGAKMGLHVKPEVPAQGSRDGAPKIVQGCTKEQEGKRAPGARGEPLGAPGGEQALGGGLAKGQLEKEVSALRLSNSNLLEELEELGRERQRLQGELQSLTQKLQREFVPKPEAQVQLQQLRRSVGLLTEELAIEKEATEKLRRRLASQTSGLQGLWNCFPPDLVGKGSARSTAAEPLEELQACISTLVDRHLESQQVQARLEEENQRLRGSLPPCGEPEASLKATASPQVAALEEDLGKLEEELRAVQATMSGKSQEICKLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKVMLEKYNTACREMTRLRDTAAEERRRSEELAARAAEQERQAGEMRGRSEQFEKTAELLKEKTNHLIGACRDKESKIKELLKKLEQLSEEVLEVRAENTHLVLQLQDTQKNHEEIISTYRNHLLNAARVSLLESGREQRYRAEEGLSHLSLLFLIHTYHFARPIGPRGRSRDLIVRIKRGCV", "length": 1025 }, "evidence": [ { "id": "F1SDE0", "url": "https://omabrowser.org/oma/group/F1SDE0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E9Q9D8-1", "protein_name": "Ankyrin repeat domain 35", "gene_name": "Ankrd35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRIFSCSSSQVAVEKWNRRDQKLLEAVQRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECLTILLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKDDKSALILACEKGSAEVAELLLSHGADAGAVDSLGHNALHYALRTQDKELWRLLQQALNRRRRGGHGLVQHPDHPSQASSCEPRVGSPPKNSRKVEPEEEQEEEGEERCSEEWRWKFEEEQRKVHQLEQELVRKTDECKAHAAAFSSLEEQIREQAQELGHLLVQEPGAPGNQGPGLRPEGDGMEEGCPLNLLAERIQELKKQQKALATINPTLVPKRAEELAPAEIHHEVHRKSQPEQGLPQGPSSETTGKATGQQPNTNGGQNLGLQNTEQVCAGQKERTPAPGTETAGTVGEPVGIAMNQLLLQLREELAAVWREKDAARGALSRPVLEGALGTPRAEAAAAAWEKMEARLERVLVRLDGAKMGLHVKPEVPVQGSRDGAPKAVPGCSKEQEEKKALGTRGEPLGAPGKEQALGGGLAKGQLEKEVSALRLSNSNLLEELGELGRERQRLQGELQSLTQRLHREFVPKPEAQVQLQQLRRSVGMLTEELAMEKEATDKLRRLLASQTSGLQGLWKCLPPDLVGKGNTQSTAAEPLEELQACISTLVDRHLEAQRVLARLEEENQQLRGSLAPCGEPEASLKVTASPQVAALEEDLGMLEEELRAVQATMSGKSQEICKLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKVVLEKYNTACREMTRLRDTVAEERRRSEDLAARAAEQERQAGEMRGRSEQFEKTAELLKEKTNHLIGACRDKEAKIKELLKKLEQLSEEVLEVRGENAHLALQLQDSQKNHEEIISTYRSHLLNAARGYMEQDVYNILLRILSMQE", "length": 996 }, "evidence": [ { "id": "F1SDE0", "url": "https://omabrowser.org/oma/group/F1SDE0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3H2S2-1", "protein_name": "Ankyrin repeat domain-containing protein 35 isoform X1", "gene_name": "Ankrd35", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKRIFSCSSSQVAVEKWNRRDQKLLEAVQRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECLTILLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKDDKSALILACEKGSAEVAELLLSHGADAGAVDSLGHNALHYALRTQDKELWRLLQQALNRRRRGGHGLVQHPDHASQASPPEPQVGSPPKSSWRAEPEEEEEEASCSEEWRWKYEEEQKKVNQLQQELVRKTEECKAQTAAFIGLENQIREQVQELGHLLLQEPRAPGRQGPSLRPGGDGMEQGCPLNLLAERIQELKRQQKAAATVNPTVVPRRAEEVTPPAEIQYEVDRKSQPEQGPPQSPRTETIGKATGHQLNTSGGQNLGLDNTDQVCVGQKERSPAPGVEQAGTVGEPVGIAALNQLLLQLREELAAVWREKDAARGALSRPVLEGALGTPRAEAAAAAWEKMEARLERVLVRLDRAKAGLQVKPEVPAQGSGEGAPKAVPGCTKEQEEKRVPGARGEPLGAPGGEQAPVLAKGHLEKEVSALRLSNSNLLEELGELGRERQRLQGELQSLTQRLQREFVPKPEAQVQLQQLRRSVGLLTDELAIEKEATEKLRRRLASQSSGLQGLWNCLPPDLVGKGSTRSTAAEPLEELQTCISTLVDRHLEAQQKLARLEEENQQLRGSLAPHPEPEASLKGTASPQVAALEQDLGKLEEELRAVQATMSGKSQEICKLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKAVLEKYNTACREMARLRDAAAEERRRSEDLAARAAEQERQAGEMRGRSEQFEKTAELLKEKTDHLIGACRDKEAKIKELLKKLEQLSEEVLEVRGENAHLALQLQDSQKHHEEIISTYRNHLLNSAQGYMEQDVYNILLGILSMQE", "length": 993 }, "evidence": [ { "id": "F1SDE0", "url": "https://omabrowser.org/oma/group/F1SDE0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8N283-1", "protein_name": "Ankyrin repeat domain-containing protein 35", "gene_name": "ANKRD35", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKRIFSCSSTQVAVERWNRHDQKLLEAVHRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECLTILLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDVLDNDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKNDKSALILACEKGSAEVAELLLSHGADAGAVDSTGHDALHYALHTQDKALWRHLQQALSRRRRGGQRLVQHPDLASQASPSEPQAGSPPKSSWRAEPEEEQEEKEDEDPCSEEWRWKYEEERRKVVRLEQELVQKTEECKTQAAAYLDLENQIREQAQELGVLLSWEPRASGKQGSSLRPGGDGMEQGCPKDLLAESTQELKKQQQAAATVNPVLAPKKAEDSAPGKIQYEVHGRSQPEEQGPPQSPASETIRKATGQQLTTNGAQTFGPDHADQLPAGQKESSQVLGVEPGGTVAEPVGPAAMNQLLLQLREELAAVWREKDAARGALSRPVMEGALGTPRAEAAAAAWEKMEARLERVLARLEWAKAGLQVKPEVPSQESREGALKAAPGSIKQDEEKEKRVPGAQGEPLGALGGEKALGGLAKGQLEKEMSVLRLSNSNLLEELGELGRERQRLQRELQSLSQRLQREFVPKPQAQVQLQQLRQSVGLLTNELAMEKEATEKLRKLLASQSSGLRGLWDCLPADLVGERSAQSKAAESLEELRACISTLVDRHREAQQVLARLQEENQQLRGSLSPCREPGTSLKAPASPQVAALEQDLGKLEEELRAVQATMSGKSQEIGKLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVAQAQAWGQELKALLEKYNTACREVGRLREAVAEERRRSGDLAAQAAEQERQASEMRGRSEQFEKTAELLKEKMEHLIGACRDKEAKIKELLKKLEQLSEEVLAIRGENARLALQLQDSQKNHEEIISTYRNHLLNAARGYMEHEVYNILLQILSMEEE", 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"header": "tr|F1SDF7-1|F1SDF7_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN=LOC100156977 PE=4 SV=1 CANONICAL=F1SDF7-1" }, "locus": { "chromosome": "4", "start_pos": 99277392, "end_pos": 99260178, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007317.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007317.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007122.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007122.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLSGQLVGRLFSMAGRVCLSRSSTGAGTIGPVEAAIRMKLEQALNPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHTALSEELAGPVHALAIQARTPAQWRENPQLDTSPPCLGGSKKTRGTP", "length": 137, "header": "tr|F1SDF8-1|F1SDF8_PIG Isoform 1 of BolA family member 1 OS=Sus scrofa OX=9823 GN=BOLA1 PE=3 SV=3 CANONICAL=F1SDF8-1" }, "isoforms": [ { "isoform_ac": "F1SDF8-1", "url": "https://www.uniprot.org/uniprotkb/F1SDF8/entry#F1SDF8-1", "sequence": { "sequence": "MLSGQLVGRLFSMAGRVCLSRSSTGAGTIGPVEAAIRMKLEQALNPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHTALSEELAGPVHALAIQARTPAQWRENPQLDTSPPCLGGSKKTRGTP", "length": 137, "header": "tr|F1SDF8-1|F1SDF8_PIG Isoform 1 of BolA family member 1 OS=Sus scrofa OX=9823 GN=BOLA1 PE=3 SV=3 CANONICAL=F1SDF8-1" }, "locus": { "chromosome": "4", "start_pos": 99150702, "end_pos": 99150292, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007305.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007305.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007110.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007110.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDF8", "url": "https://www.uniprot.org/uniprotkb/F1SDF8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152975", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152975", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AE96-1", "protein_name": "BolA family member 1", "gene_name": "LOC107049580", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPPPTLSALPSGPVARSILSKLTAALQPTHLHLEDHSPRHGAPPGSETHFGLLVVSGRFEGLSPIERHRLVHAVLGAELRGPLHALSIVARTPQQWERDPNIPQPPPCMGGSKRDKRQAEGDAAASQ", "length": 127 }, "evidence": [ { "id": "F1SDF8", "url": "https://omabrowser.org/oma/group/F1SDF8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q06C60-1", "protein_name": "BolA-like protein 1", "gene_name": "Bola1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSARLARCMVSMATRACVSRGSAGSAAGGPVEAAIRAKLEQALSPEVLELRNESGGHAVPAGSETHFRVAVVSSRFEGMSPLQRHRLVHEALSEELAGPVHALAIQAKTPAQWRENPQLDISPPCLGGSKKTRGTS", "length": 137 }, "evidence": [ { "id": "F1SDF8", "url": "https://omabrowser.org/oma/group/F1SDF8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3T138-1", "protein_name": "BolA-like protein 1", "gene_name": "BOLA1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLSGQLVVRLFSMASRVCMSRGSAGSGVIGPVEAAIRTKLEQALNPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHAALSEELAGPVHALAIQARTPAQWKENPQLDTSPACLGGSKKSRN", "length": 135 }, "evidence": [ { "id": "F1SDF8", "url": "https://omabrowser.org/oma/group/F1SDF8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54G84-1", "protein_name": "BolA family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": 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{ "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDG2-1", "uniprot_ac": "F1SDG2", "uniprot_id": "F1SDG2_PIG", "mass": { "chemical_mass": 78435.0, "monoisotopic_mass": 78435.0 }, "refseq": {}, "gene_names": [ { "name": "MTMR11", "type": "recommended", "evidence": [ { "id": "F1SDG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDG2" } ] } ], "protein_names": [ { "name": "Myotubularin related protein 11", "type": "synonym", "evidence": [ { "id": "F1SDG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDG2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDG2", "url": "https://www.uniprot.org/uniprotkb/F1SDG2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MTMR11", "url": "https://www.uniprot.org/uniprotkb/F1SDG2", "locus": { "chromosome": "4", "start_pos": 99122808, "end_pos": 99115133, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006664", "url": "https://www.ensembl.org/id/ENSSSCG00000006664" } ] } } ], "crossref": [ { "id": "F1SDG2", "url": "https://alphafold.ebi.ac.uk/entry/F1SDG2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006664", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006664", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR010569", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010569", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022587", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022587", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029021", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030564", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030564", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GWQRSQD", "url": "https://omabrowser.org/oma/group/GWQRSQD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10807", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10807", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10807:SF51", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10807:SF51", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06602", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06602", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12578", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12578", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SDG2", "url": "https://www.uniprot.org/uniprotkb/F1SDG2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDG2-1", "url": "https://www.uniprot.org/uniprotkb/F1SDG2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWWGGRGQSFNIAPQKEEPEMGLSGPKSVQGRAMPEPRSRQLGSCLASGCLPGEQILAWAPGVRKGLEPELPGTLICSNLRVTFQPCGWQRSQETPLSSEYDFSLANIGRLEAVNGLSRVQLLRPGSLLKFVPEEILIHGRDFRLLRIGFEAGGLEPQAFQVTMAIVQARAQSSQGQKYAGLTLSKAGQSAGSRKPPIPLLEISEDWETERRKQRARGWRVSTVNERFDIATSLPRYFWVPNRTLDSEVRRAFGHFHQGRGPRLTWHHPGGSDLLRCGGFYTASDPNKEDIRAVETMLQAGHSDVVLVDTLDELPSLADVQLAHLRLRALCLPDSSVAEDKWLSALEGTRWLDYVRSCLRKASDISVLVTSRVRSVVLQERCDRDFNGLLSSLVQLLSSPEARTLLGFQSLVQREWVAAGHPFLTRLGGTGASEEAPVFLLFLDCVWQLLQQFPAEFEFSEFFLLALHDSVRVPDTLTFLRDSPWERGKQSGQINTYTQVYTAGYSQPPAGNSINPQLSVWDWDLRYSNEQILQFHNPGYDPEHCPDSWLPRQQPSFMVPGPPTSVWLFSRGALTPLNQLCPWRDSPSLLAVSSRWLPRPASSSESLADQEWGLPSHWGACPLPSGLLLPGYLGPQIRLWRRCYLRGRPEVQMGLSAPTIAGLQDELSHLQELLRKWTPRISPEDHSKKRDPNTILSQSH", "length": 700, "header": "tr|F1SDG2-1|F1SDG2_PIG Isoform 1 of Myotubularin related protein 11 OS=Sus scrofa OX=9823 GN=MTMR11 PE=3 SV=2 CANONICAL=F1SDG2-1" }, "isoforms": [ { "isoform_ac": "F1SDG2-1", "url": "https://www.uniprot.org/uniprotkb/F1SDG2/entry#F1SDG2-1", "sequence": { "sequence": "MWWGGRGQSFNIAPQKEEPEMGLSGPKSVQGRAMPEPRSRQLGSCLASGCLPGEQILAWAPGVRKGLEPELPGTLICSNLRVTFQPCGWQRSQETPLSSEYDFSLANIGRLEAVNGLSRVQLLRPGSLLKFVPEEILIHGRDFRLLRIGFEAGGLEPQAFQVTMAIVQARAQSSQGQKYAGLTLSKAGQSAGSRKPPIPLLEISEDWETERRKQRARGWRVSTVNERFDIATSLPRYFWVPNRTLDSEVRRAFGHFHQGRGPRLTWHHPGGSDLLRCGGFYTASDPNKEDIRAVETMLQAGHSDVVLVDTLDELPSLADVQLAHLRLRALCLPDSSVAEDKWLSALEGTRWLDYVRSCLRKASDISVLVTSRVRSVVLQERCDRDFNGLLSSLVQLLSSPEARTLLGFQSLVQREWVAAGHPFLTRLGGTGASEEAPVFLLFLDCVWQLLQQFPAEFEFSEFFLLALHDSVRVPDTLTFLRDSPWERGKQSGQINTYTQVYTAGYSQPPAGNSINPQLSVWDWDLRYSNEQILQFHNPGYDPEHCPDSWLPRQQPSFMVPGPPTSVWLFSRGALTPLNQLCPWRDSPSLLAVSSRWLPRPASSSESLADQEWGLPSHWGACPLPSGLLLPGYLGPQIRLWRRCYLRGRPEVQMGLSAPTIAGLQDELSHLQELLRKWTPRISPEDHSKKRDPNTILSQSH", "length": 700, "header": "tr|F1SDG2-1|F1SDG2_PIG Isoform 1 of Myotubularin related protein 11 OS=Sus scrofa OX=9823 GN=MTMR11 PE=3 SV=2 CANONICAL=F1SDG2-1" }, "locus": { "chromosome": "4", "start_pos": 99122265, "end_pos": 99115330, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007301.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007301.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007106.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007106.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDG2", "url": "https://www.uniprot.org/uniprotkb/F1SDG2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AFE4-1", "protein_name": "Myotubularin related protein 11", "gene_name": "MTMR11", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAARGGLSALPVLPGEVVLEAARGVRHRGAGGSVRGTLLCTNVRVAFVPGAQPPSFSPFLQSDYSVALRCIRTLVAASSFTKPTVLTATSTLSFIPEELAVFCRDFRLLRFHFPENGLGLQAFRVANAIAQAWETATWPGDSGSHVDATMGDDEDEEEGSPPTLLFESLQDWERELQRLGAVGWRVSAVNERFDMAPSLPRYLWVPSALLDHDLKRTFAHFQERRVARLCWHHPNGSDLLRAAGFHAASEPGSEDIRCLEVLLGAGCRPCVLADTAELPSPPDIQLAHLRLRALCLPGAAADEKWLSALEGTRWLEHIRACLRKAVEVASLLAGRRCSVVLQEPSDRDLSCLLASLVQLLADPHARSLRGFQSLVQREWVAAGHPFPQRLGLRRDSPREESPVFLLFLDCTWQLLRQFPAAFGFTEAYLLALHDSAFLPYCSTFLFSCQRQRGRGGVQQPRTQTYTPVSSRWDPPGSTVCRLPPVWAWGLRYSRQQRARFRNPAWDPGPVGTPDAVDPQNTGTPSSTWSGSSSGAVLALSKGSLTPQPFPWRSGRPPPRLLRWAPSLETLSDRGGDPIPPPPRGLLLPCAAGPSVRLWRRCYLRGLPEAQHGRLAPCPALLLEELALLQERLRAWQQDGAHAEPASSPLAPSRQRRVAAIGGAR", "length": 665 }, "evidence": [ { "id": "F1SDG2", "url": "https://omabrowser.org/oma/group/F1SDG2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A4FU01-1", "protein_name": "Myotubularin-related protein 11", "gene_name": "MTMR11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWWGGRGQSFNIAPQKEEPEMGSVQENRMPEPRSRQPSSCLASRCLPGEQILAWAPGVRKGLEPELSGTLICTNFRVTFQPCGWQWNQDTPLNSEYDFALVNIGRLEAVSGLSRVQLLRPGSLHKFIPEEILIHGRDFRLLRVGFEAGGLEPQAFQVTMAIVQARAQSNQAQQYSGITLSKAGQGSGSRKPPIPLMETAEDWETERKKQAARGWRVSTVNERFDVATSLPRYFWVPNRILDSEVRRAFGHFHQGRGPRLSWHHPGGSDLLRCGGFYTASDPNKEDIRAVELMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVAEDKWLSALEGTRWLDYVRACLRKASDISVLVTSRVRSVILQERGDRDLNGLLSSLVQLLSAPEARTLFGFQSLVQREWVAAGHPFLTRLGGTGASEEAPVFLLFLDCVWQLLQQFPADFEFSEFFLLALHDSVRVPDTLTFLRNTPWERGKQSGQLNSYTQVYTPGYSQPPAGNSFNLQLSVWDWDLRYSNAQILQFQNPGYDPEHCPDSWLPRPQPSFMVPGPPSSVWLFSRGALTPLNQLCPWRDSPSLLAVSSRWLPRPAISSESLADQEWGLPSHWGACPLPPGLLLPGYLGPQIRLWRRCYLRGRPEVQMGLSAPTISGLQDELSHLQELLRKWTPRISPEDHSKKRDPHTILNPTEIAGILKGRAEGDLG", "length": 709 }, "evidence": [ { "id": "F1SDG2", "url": "https://omabrowser.org/oma/group/F1SDG2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3ZQH5-1", "protein_name": "Myotubularin related protein 11", "gene_name": "Mtmr11", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWWGGRGQSFNIAPQKEEPELGFSGPKSDPGNRMPEPSSHQLGSCLASGCLPGEHILAWAPGRRKGPGLELPGTLICTNFRVTFQPCGWQRNQDTPLSSEYDFALINIGRLEAVSGLSRVQLLRPGSQLKFIPEEVLIHGRDFRLLRIGFEAGGLAPQAFQVTMAIIQARAQSSQVQQYRGITLSKAGKVSGSRKPPIPLLETLEDWETERKKQGARGWRVSMVNERFDVATSLSGYFWVPNRILDSEVRRAFAHFHQGRGPRLSWHHPGGSDLLRCAGFYIASDPNKEDIRAVELMLQAGHSDVVLVDTMDEMPSLADVQLAHLKLRALCLPDSSVAEDKWLSALEGTRWLDYVRSCLRKASDISVLVTSRVRSVVLQERGDRDFNGLLSSLVQLLLAPEARTLFGFQSLVQREWVAAGHPFLTRLGETGASEEAPVLPLFLDCAWQLLQQFPAEFEFSEFFLLALHDSIRVPDTLTFLRNTPWERGKKSGQFNSYTQVYTPEYSQPLAGSPANLHLSVWDWDLRYSKEQISQFLNPGYDPEHCPDSGLPRQQPSLMVPGSPSSMWLFSRGALTPLNQLCPWQDSTSLLTVSSHWLPRPARSSESLADQEWGLPSHWGACPLPPGLLLPGYLGPQIRFWKRCYLRGRPEVQIGSSALTISGLQDELSHLQELLRKWTPRISPEDHSKKRDPNTILSQIC", "length": 700 }, "evidence": [ { "id": "F1SDG2", "url": "https://omabrowser.org/oma/group/F1SDG2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E7F7E6-1", "protein_name": "Myotubularin-related protein 11", "gene_name": "mtmr11", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLTGSKTTFKVRQMVPDMKERMMSHSSLHARGRDVLGLCCLPGECVLQRAVLVRKKLSAKEGGGWLSGTLFCTHFRVAFVPQDSQKPDDNADPVLLGDHDVALASIEKVVAVGPSRTKLVTPTCSLKFTPEELVLYCRDLRVLCFLFDRLTPDTQAVEITYTIAKTYQPLKPGTILSFQNAALGSIEMKQFLSNRRRDPSMNWLECSLGWEQELERTGASGWRVSSVNDRFEMSTSLPRFNVVPQRVLDTELKKTFAHFNEGRIPRWCWRHPRGSDLLRMASFQNNIYHEKDDIRNLELVLFGGQQLCVIVDLGEEMPSPADIQLAHTRLRTLCLGDISSSVSVPDDKWLSTLESTRWLDYTRCCLRKAAEVCCLLRAGHMTVVLQEPEDRDMNCVVCSLVQVMCDPHCRTVAGFQGLVQKEWITAGHKFLSRINYHRESDKEEAPVFLLFLDCVWQLWAQYPARFQLTEDYLLALHDSVHLPLFSSFLANSQRERCRRSQHLPQSYTPVNGLRDVPMSVPEEPVDPPFPPVWDWALQYSSQRRARFTQPISQPTCPPPVLNGNLNTNLERSWHNDGLPGSVFLLSRSTFSHPSNLLPWRSSNSGSYWKSHRRAPSSESLSGLERLIRACSLSEPSENNTILHDPYEPLLPLLLGPCVRVWRSCYLRGALHAQAFSHPVSSCTQHPVDQLAWEVQQLREKLAQASNRRPENQIKHQEARRPESNLNQNANNGTFLFSSSRVSQQQQQQAPSSRGAAQSSAPPRPQRTASDPPRPAQRNSGKHTFLFGHQQEPQSGQRYIPSPSAKLHKRPGNSQ", "length": 814 }, "evidence": [ { "id": "F1SDG2", "url": "https://omabrowser.org/oma/group/F1SDG2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1MWR0-1", "protein_name": "Myotubularin related protein 11", "gene_name": "MTMR11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MWWGGRGQSFNIAPQKEEPEMGLSGPKSVQGTGMPEPRSRQLGSCLASGGLPGEQILAWAPGVRKGLEPEMPGTLICSNLRVTFQPHGWQRSQETPLSSEYDFSLANIGRLEAVHGPSRVQLLRPGSLLKFIPEEILIHGQDFRLLRVGFEAGGLEPQAFQVTMAIVQARAQNSPAQQYAGITLSQAGQSSDSRKPPIPLLETIEDWETERKKQAARGWRVSTVNERFDVATSLPRYFWVPNRTLDSEVRRAFGHFHQGRGPRLSWHHPGGSDLLRCGGFYTASDPNKEDIRAVESMLQAGHSDVVLVDTMDELPSLADVQLAHLRLRALCLPDSSVAEDKWFSALEGTRWLDYTRSCLRKASDISVLVTSRVRSVVLQERGDRDFNGLLSSLVQLLSAPEARTLLGFQSLVQREWVAAGHPFLTRLGGSGASEEAPVFLLFLDCVWQLLQQFPAEFEFSEFFLLALHDSVRVPDTLTFLRDTPWERGKQSGQFNNYTQVYTPGFPGAGNSINPQLSVWDWNLRYSNKQILQFRNPGYDPEHCPDSWLPRQQPSFMVPGPPSSVWLFSRGSLTPLNQLCPWRDSPSLLAVSSRWLPRPAISSESLADQEWGLPSHWGACPLPPGLLLPGCLGPQIRLWRRCYLRGRPEVQMGLSAPTISGLQEELSHLQELLRKWTPRISPEDHSKRRNPNTILSQSR", "length": 698 }, "evidence": [ { "id": "F1SDG2", "url": "https://omabrowser.org/oma/group/F1SDG2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3V1L6-1", "protein_name": "Myotubularin-related protein 11", "gene_name": "Mtmr11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWWGGRGQSFNIAPQKEEPEMGLSGPKSNPGNRMPEPSSHQLGSCLASGCLPGEHILAWAPGRRKGPGLDLPGTLICTNFRVTFQPCGWQRKQDTPLSSENDFALINIGRLEAVSGLSRVQLLRPGSQLKFIPEELLLHGRDFRLLRVGFEAGGLAPQAFQVTMAIIQARAQSSQVQQYRGITLSKVGKVSGSRKPPIPLLETLEDWETECKKQGARGWRVSTVNERFDVATSLSGYFWVPNRILDSEVRRAFAHFHQGRGPRLSWHHPGGSDLLRCGGFYIASDPNKEDIRAVESMLQAGHSDVVLVETMDEMPSLADIQLAHLKLRALCLPDSSVAEDKWLSALEGTRWLDYVRSCLRKASDISVLVTSRVRSVVLQELGDRDFNGLLSSLVQLLLAPEARTLFGFQSLVQREWVAAGHPFLTRLGDTGASEEAPVFPLFLDCAWQLLQQFPAEFEFSEFFLLALHDSIRVPDTLTFLRNTPWERGKKSGQFNSYTQVYTPEYSQPLAGSSANLHLSVWDWDLRYSKEQISQFLNPGYDPEHCPDSRFSRQQQSLMVPGPPSSMWLFSRGTLTPLNQLCPWQDSSSLLAVSSHWLPRPARSSESLADQEWGLPSHWGACPLPPGLLLPGYLGPQIRFWKRCYLRGRPEVQMGSSALTVSALQDELSHLQELLRQWTPRISPEDQSKKRDPNTILSQIC", "length": 700 }, "evidence": [ { "id": "F1SDG2", "url": "https://omabrowser.org/oma/group/F1SDG2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SDG2", "url": "https://www.uniprot.org/uniprotkb/F1SDG2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SDG2", "url": "https://www.uniprot.org/uniprotkb/F1SDG2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 242, "end_pos": 244, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SDG2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 700, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SDG2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SDG2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SDG2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDG2" }, { "id": "PS51339", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51339" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Myotubularin phosphatase", "eco_id": "ECO_0000259", "start_pos": 201, "end_pos": 644, "start_aa": "Leu", "end_aa": "Tyr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 242, "end_pos": 244 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDH6-1", "uniprot_ac": "F1SDH6", "uniprot_id": "F1SDH6_PIG", "mass": { "chemical_mass": 55062.0, "monoisotopic_mass": 55062.0 }, "refseq": { "ac": "XP_020939867", "name": "BTB/POZ domain-containing protein 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939867" }, "gene_names": [ { "name": "BTBD2", "type": "recommended", "evidence": [ { "id": "F1SDH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDH6" } ] }, { "name": "BTBD2", "type": "synonym", "evidence": [ { "id": "XP_020939867", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939867" } ] } ], "protein_names": [ { "name": "BTB domain containing 2", "type": "synonym", "evidence": [ { "id": "F1SDH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDH6/entry#names_and_taxonomy" } ] }, { "name": "BTB/POZ domain-containing protein 2", "type": "synonym", "evidence": [ { "id": "XP_020939867", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939867" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDH6", "url": "https://www.uniprot.org/uniprotkb/F1SDH6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BTBD2", "url": "https://www.uniprot.org/uniprotkb/F1SDH6", "locus": { "chromosome": "2", "start_pos": 76559919, "end_pos": 76538523, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013444", "url": "https://www.ensembl.org/id/ENSSSCG00000013444" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013444", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013444", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18281", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18281", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18523", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18523", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513521", "url": "https://www.ncbi.nlm.nih.gov/gene/100513521", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012983", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012983", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038648", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038648", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513521", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513521", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CCPALCI", "url": "https://omabrowser.org/oma/group/CCPALCI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SDH6", "url": "https://www.orthodb.org/?gene=F1SDH6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45774", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45774", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45774:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45774:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08005", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08005", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020939867", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939867", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SDH6", "url": "https://www.uniprot.org/uniprotkb/F1SDH6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDH6-1", "url": "https://www.uniprot.org/uniprotkb/F1SDH6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAGGSGGRASCPPGVGPGAGGGPGPSANAAPAPGNAAAAAAAPAPAAPGPPPPVSGPGAQAAAGGERAAEEPGAAALLREPVYNWQATKPTVKERFAFLFNNEVLCDVHFLVGKGLGAQRIPAHRFVLAVGSAVFDAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAKKYAVPALEAHCVEFLKKNLRADNAFMLLTQARLFDEPQLASLCLENIDKNTADAITAEGFTDIDLDTLVAVLERDTLGIREVRLFNAVVRWSEAECQRQQLQVTPENKRKVLGKALALIRFPLMTIEEFAAGPAQSGILVDREVVSLFLHFTVNPKPRVDFIDRPRCCLRGKECSINRFQQVESRWGYSGTSDRIRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFRVMFKEPVEVLPNVNYTACATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSVEDGQIPEVIFYT", "length": 515, "header": "tr|F1SDH6-1|F1SDH6_PIG Isoform 1 of BTB domain containing 2 OS=Sus scrofa OX=9823 GN=BTBD2 PE=4 SV=2 CANONICAL=F1SDH6-1" }, "isoforms": [ { "isoform_ac": "F1SDH6-1", "url": "https://www.uniprot.org/uniprotkb/F1SDH6/entry#F1SDH6-1", "sequence": { "sequence": "MAAGGSGGRASCPPGVGPGAGGGPGPSANAAPAPGNAAAAAAAPAPAAPGPPPPVSGPGAQAAAGGERAAEEPGAAALLREPVYNWQATKPTVKERFAFLFNNEVLCDVHFLVGKGLGAQRIPAHRFVLAVGSAVFDAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAKKYAVPALEAHCVEFLKKNLRADNAFMLLTQARLFDEPQLASLCLENIDKNTADAITAEGFTDIDLDTLVAVLERDTLGIREVRLFNAVVRWSEAECQRQQLQVTPENKRKVLGKALALIRFPLMTIEEFAAGPAQSGILVDREVVSLFLHFTVNPKPRVDFIDRPRCCLRGKECSINRFQQVESRWGYSGTSDRIRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFRVMFKEPVEVLPNVNYTACATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSVEDGQIPEVIFYT", "length": 515, "header": "tr|F1SDH6-1|F1SDH6_PIG Isoform 1 of BTB domain containing 2 OS=Sus scrofa OX=9823 GN=BTBD2 PE=4 SV=2 CANONICAL=F1SDH6-1" }, "locus": { "chromosome": "2", "start_pos": 76559052, "end_pos": 76538547, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014688.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014688.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014292.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014292.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDH6", "url": "https://www.uniprot.org/uniprotkb/F1SDH6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513521", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513521", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A666-1", "protein_name": "BTB domain containing 2", "gene_name": "BTBD2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAGGSGPGGLSSSCPQPPPPPPGNGAACAAADGTPASPPGLTYNQCGANNPAAAAGGAGGGGGGPGVGAAPAGGPGGGLQREPVYNWQATKPTVQERFAFLFNNEVLSDVHFLVGKGRGTQRIPAHRFVLAVGSAVFDAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAKKYAVPALEAHCVEFLKKNLRADNAFMLLTQARLFDEPQLASLCLENIDKNTSDAINAEGFTDIDLDTLVAVLERDTLGIREVRLFGAVVRWSEAECQRQQLQVVPENKRKVLGKALALIRFPLMTIEEFAAGPAQSGILTDREVVSLFLHFTVNPKPRVEFIDRPRCCLRGKECSISRFQQVLSEQTDLRRWLWVVRLHTRTHGLPGPRFPLRHQRAAQGDPRIAHQRRQDLLHLLLRGREQQRHFGGGRTDPRDHLLHIVPPRVGARQRPEAPPRSPPPRGCGRPFLPSPHRHPPVAALSVGASPPAGSTEIREELPQVIVVRLLKEVQAPHVAQVCGHLLCGDRGGRWGRGVAVWGRVWGHAERPHLGSSHTAPPPAWLVWCPRSSDTSP", "length": 582 }, "evidence": [ { "id": "F1SDH6", "url": "https://omabrowser.org/oma/group/F1SDH6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1M311-1", "protein_name": "BTB domain containing 2", "gene_name": "Btbd2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAGGSGRASCPPGVGPGAGGLGPSANAAAAPSNAAACASGPPPPPSPPPGPGTDAQAVGEERDDAGPGALLREPVYNWQATKPTVQERFAFLFNNEVLCDVHFLVGKGLSSQRVPAHRFVLAVGSAVFDAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAKKYAVPALEAHCVEFLKKHLRADNAFMLLTQARLFDEPQLASLCLESIDKNTADAIAAEGFTDIDLDTLVAVLERDTLGIREVRLFNAVVRWSEAECQRQQLQVTPENKRKVLGKALGLIRFPLMTIEEFAAGPAQSGILVDREVVSLFLHFTVNPKPRVEFIDRPRCCLRGKECSINRFQQVESRWGYSGTSDRISSRLLHGRASWAQDIVPSAARCLRRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFRVMFKEPVEVLPNVNYTACATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSVEDGQIPEIIFYT", "length": 532 }, "evidence": [ { "id": "F1SDH6", "url": "https://omabrowser.org/oma/group/F1SDH6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9BX70-1", "protein_name": "BTB/POZ domain-containing protein 2", "gene_name": "BTBD2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGGSGGRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGPTPPAPPGPGTDAQAAGAERAEEAAGPGAAALQREAAYNWQASKPTVQERFAFLFNNEVLCDVHFLVGKGLSSQRIPAHRFVLAVGSAVFDAMFNGGMATTSTEIELPDVEPAAFLALLKFLYSDEVQIGPETVMTTLYTAKKYAVPALEAHCVEFLKKNLRADNAFMLLTQARLFDEPQLASLCLENIDKNTADAITAEGFTDIDLDTLVAVLERDTLGIREVRLFNAVVRWSEAECQRQQLQVTPENRRKVLGKALGLIRFPLMTIEEFAAGPAQSGILVDREVVSLFLHFTVNPKPRVEFIDRPRCCLRGKECSINRFQQVESRWGYSGTSDRIRFSVNKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFRVMFKEPVEVLPNVNYTACATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSVEDGQIPEVIFYT", "length": 525 }, "evidence": [ { "id": "F1SDH6", "url": "https://omabrowser.org/oma/group/F1SDH6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular 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"end_pos": 501, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SDH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDH6" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 107, "end_pos": 177, "start_aa": "Cys", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 426, "end_pos": 428 }, { "start_pos": 454, "end_pos": 456 }, { "start_pos": 499, "end_pos": 501 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDH7-1", "uniprot_ac": "F1SDH7", "uniprot_id": "F1SDH7_PIG", "mass": { "chemical_mass": 34091.0, "monoisotopic_mass": 34091.0 }, "refseq": { "ac": "XP_003123047", "name": "protein ABHD17A", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123047" }, "gene_names": [ { "name": "ABHD17A", "type": "recommended", "evidence": [ { "id": "F1SDH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ] }, { "name": "ABHD17A", "type": "synonym", "evidence": [ { "id": "XP_003123047", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123047" } ] } ], "protein_names": [ { "name": "palmitoyl-protein hydrolase", "type": "recommended", "evidence": [ { "id": "F1SDH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDH7/entry#names_and_taxonomy" } ] }, { "name": "3.1.2.22", "type": "synonym", "evidence": [ { "id": "F1SDH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDH7/entry#names_and_taxonomy" } ] }, { "name": "protein ABHD17A", "type": "synonym", "evidence": [ { "id": "XP_003123047", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123047" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ABHD17A", "url": "https://www.uniprot.org/uniprotkb/F1SDH7", "locus": { "chromosome": "2", "start_pos": 76666552, "end_pos": 76658068, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013442", "url": "https://www.ensembl.org/id/ENSSSCG00000013442" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013442", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013442", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524666", "url": "https://www.ncbi.nlm.nih.gov/gene/100524666", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR022742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524666", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524666", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YIRCVPG", "url": "https://omabrowser.org/oma/group/YIRCVPG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SDH7", "url": "https://www.orthodb.org/?gene=F1SDH7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12277", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12277", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12277:SF52", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12277:SF52", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12146", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12146", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9648002", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648002", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003123047", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123047", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "19233", "url": "https://www.rhea-db.org/rhea/19233", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDH7-1", "url": "https://www.uniprot.org/uniprotkb/F1SDH7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNGLSVTELCCLFCCPPCPGRIAAKLAFLPPEPTYSLMPEPEPGPGGAGAAPSGTLRASAGTPGRWKLHLMERADFQYSQRELDTIEVFLTKSSRGNRISCMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGTRINCNIFSYDYSGYGVSSGKPSEKNLYADIDAAWQALRTRYGISPDSIVLYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQRT", "length": 310, "header": "tr|F1SDH7-1|F1SDH7_PIG Isoform 1 of palmitoyl-protein hydrolase OS=Sus scrofa OX=9823 GN=ABHD17A PE=3 SV=1 CANONICAL=F1SDH7-1" }, "isoforms": [ { "isoform_ac": "F1SDH7-1", "url": "https://www.uniprot.org/uniprotkb/F1SDH7/entry#F1SDH7-1", "sequence": { "sequence": "MNGLSVTELCCLFCCPPCPGRIAAKLAFLPPEPTYSLMPEPEPGPGGAGAAPSGTLRASAGTPGRWKLHLMERADFQYSQRELDTIEVFLTKSSRGNRISCMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGTRINCNIFSYDYSGYGVSSGKPSEKNLYADIDAAWQALRTRYGISPDSIVLYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQRT", "length": 310, "header": "tr|F1SDH7-1|F1SDH7_PIG Isoform 1 of palmitoyl-protein hydrolase OS=Sus scrofa OX=9823 GN=ABHD17A PE=3 SV=1 CANONICAL=F1SDH7-1" }, "locus": { "chromosome": "2", "start_pos": 76666312, "end_pos": 76661782, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014686.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014686.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014290.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014290.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 62, "start_aa": "Thr", "end_pos": 62, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr62", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524666", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524666", "resource": "KEGG Pathway" }, { "id": "R-SSC-9648002", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648002", "resource": "Reactome", "description": "RAS processing" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MYM8-1", "protein_name": "palmitoyl-protein hydrolase", "gene_name": "ABHD17A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNGLSVTELCCLFCCPPCPGRIAAKLAFLPPEPTYSLVPEPEPGPGGAGAAPSGNLRALAGTPGRWKLHLMERADFQYSQRELDTIEVFLTKSSRGNRISCMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGTRINCNIFSYDYSGYGVSSGKPSEKNLYADIDAAWQALRTRYGISPDSIVLYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQRA", "length": 310 }, "evidence": [ { "id": "F1SDH7", "url": "https://omabrowser.org/oma/group/F1SDH7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HF97-1", "protein_name": "palmitoyl-protein hydrolase", "gene_name": "Abhd17a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNGLSVSELCCLFCCPPCPGRIAAKLAFLPPEPTYSLVPEPEPGPGGAGAAPSGPLRTSAVTPGRWKIHLTERADFQYGQRELDTIEVFLTKSARANRIACMYVRCVPGARYTVLFSHGNAVDLGQMCSFYVGLGTRIGCNIFSYDYSGYGISSGRPSEKNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQRT", "length": 310 }, "evidence": [ { "id": "F1SDH7", "url": "https://omabrowser.org/oma/group/F1SDH7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5XIJ5-1", "protein_name": "Alpha/beta hydrolase domain-containing protein 17A", "gene_name": "Abhd17a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNGLSVSELCCLFCCPPCPGRIAAKLAFLPPEPTYSLVPEPEPGPGGAGAAPSGPLRTSAATPGRWKIHLTERADFQYGQRELDTIEVFVTKSARANRIACMYVRCVPGARYTVLFSHGNAVDLGQMCSFYVGLGTRIGCNIFSYDYSGYGISSGRPSEKNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQRT", "length": 310 }, "evidence": [ { "id": "F1SDH7", "url": "https://omabrowser.org/oma/group/F1SDH7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q96GS6-1", "protein_name": "Alpha/beta hydrolase domain-containing protein 17A", "gene_name": "ABHD17A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASSGAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQRA", "length": 310 }, "evidence": [ { "id": "F1SDH7", "url": "https://omabrowser.org/oma/group/F1SDH7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99JW1-1", "protein_name": "Alpha/beta hydrolase domain-containing protein 17A", "gene_name": "Abhd17a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNGLSVSELCCLFCCPPCPGRIAAKLAFLPPDPTYSLVPEPEPGPGGAGAAPSGPLRTSAATPGRWKIHLTERADFQYGQRELDTIEVFVTKSARANRIACMYVRCVPGARYTVLFSHGNAVDLGQMCSFYVGLGTRIGCNIFSYDYSGYGISSGRPSEKNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVEGAGHNDIELYSQYLERLRRFISQELPSQRA", "length": 310 }, "evidence": [ { "id": "F1SDH7", "url": "https://omabrowser.org/oma/group/F1SDH7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "positive regulation of protein localization to endosome", "id": "GO:1905668", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905668", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" }, { "name": "protein localization to membrane", "id": "GO:0072657", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072657", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" }, { "name": "negative regulation of NLRP3 inflammasome complex assembly", "id": "GO:1900226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1900226", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" }, { "name": "regulation of postsynapse organization", "id": "GO:0099175", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099175", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" }, { "name": "negative regulation of protein localization to microtubule", "id": "GO:1902817", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902817", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" }, { "name": "dendritic spine", "id": "GO:0043197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043197", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" }, { "name": "endosome membrane", "id": "GO:0010008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010008", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" }, { "name": "postsynaptic density membrane", "id": "GO:0098839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098839", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "palmitoyl-(protein) hydrolase activity", "id": "GO:0008474", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008474", "evidence": [ { "database": "UniProtKB", "id": "F1SDH7", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "19233", "name": "", "equation": "S-hexadecanoyl-L-cysteinyl-[protein] + H2O = L-cysteinyl-[protein] + hexadecanoate + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "19233", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/19233" } ] }, { "id": "R-SSC-9647991", "name": "Palmostatin B binds RAS depalmitoylases", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9647991", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9647991" } ] }, { "id": "R-SSC-9647994", "name": "RAS proteins are depalmitoylated", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [], "output_participant_list": [ "R-ALL-8848337" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-9647994", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9647994" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-8848337", "participant_name": "PALM(-) [cytosol]", "crossref": [ { "id": "ZINC000006072466", "database": "ZINC", "url": "" }, { "id": "7896", "database": "ChEBI", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SDH7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDH7" }, { "id": "PF12146", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12146" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Serine aminopeptidase S33", "eco_id": "ECO_0000259", "start_pos": 111, "end_pos": 216, "start_aa": "Arg", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 62 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDI2-1", "uniprot_ac": "F1SDI2", "uniprot_id": "F1SDI2_PIG", "mass": { "chemical_mass": 6553.0, "monoisotopic_mass": 6553.0 }, "refseq": {}, "gene_names": [ { "name": "UQCR11", "type": "recommended", "evidence": [ { "id": "F1SDI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDI2" } ] } ], "protein_names": [ { "name": "Cytochrome b-c1 complex subunit 10", "type": "recommended", "evidence": [ { "id": "F1SDI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDI2/entry#names_and_taxonomy" } ] }, { "name": "Complex III subunit 10", "type": "synonym", "evidence": [ { "id": "F1SDI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDI2/entry#names_and_taxonomy" } ] }, { "name": "Complex III subunit XI", "type": "synonym", "evidence": [ { "id": "F1SDI2", "database": "UniProtKB", "url": 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"ENSSSCG00000013436", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013436", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524239", "url": "https://www.ncbi.nlm.nih.gov/gene/100524239", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "5GUP", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=5GUP&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "8IOG", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=8IOG&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "8UGD", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=8UGD&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "8UGE", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=8UGE&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "8UGF", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=8UGF&bu=0", "database": "iCn3D", "categories": [ "3D 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"length": 1202, "header": "tr|A0A286ZIP3-1|A0A286ZIP3_PIG Computationally mapped isoform of Erythroid differentiation regulatory factor 1 OS=Sus scrofa OX=9823 GN=EDRF1 PE=4 SV=1 CANONICAL=F1SDM8-1" }, "locus": { "chromosome": "14", "start_pos": 135084875, "end_pos": 135042213, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049634.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049634.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031385.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031385.1" } ] } }, { "isoform_ac": "F1SDM8-1", "url": "https://www.uniprot.org/uniprotkb/F1SDM8/entry#F1SDM8-1", "sequence": { "sequence": 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"length": 1236, "header": "tr|F1SDM8-1|F1SDM8_PIG Isoform 1 of Erythroid differentiation regulatory factor 1 OS=Sus scrofa OX=9823 GN=EDRF1 PE=4 SV=1 CANONICAL=F1SDM8-1" }, "locus": { "chromosome": "14", "start_pos": 135084875, "end_pos": 135042213, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011753.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011753.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011451.2", "url": "https://www.ensembl.org/id/ENSSSCP00000011451.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDM8", "url": "https://www.uniprot.org/uniprotkb/F1SDM8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522106", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522106", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K4K6-1", "protein_name": "Erythroid differentiation regulatory factor 1", "gene_name": "Edrf1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMGDPKEAGAEASPSGAAARGGLSLLSQTESEEPSAQGSALFLGGNEVKSRAVVKYSSAPPRTAFARLEEKTDLKLPPANWLRESAKLGPAGTTILGNSKKSKPFSSFGMAYDFIDSVGNDVDVVSDSENIKKLLKIPYSKSHVSMAVHRIGRTLLLDELDIQELFMRSSQTGDWTWLKEFYQRLIDQKWQRKKKSKEHWYQKAILSKFLYYSINGDGAAQPVPSPAEQQESASSDQTHESEGASWPAPFEMPSSVSEDPSASSQGREPLEPSCIVGHVASAPKEQNLTTLFNDGENSQGLKNDFVRNILWTFEDIHMLVGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLICNVPELVMCFHVNGIVQKYEMIKTEEIPNLENSNFSTKVIKDIAQNILSFLKSNCTKEGHTYWLFKASSSDIVKLYDLTTLCEETEDKYQNPFTMPVAILLYKVACNMMMKKNQNKKHYGTIRTLLLNCVKLLDKSRHPQIIASANYMLSELFQLDEPKKEESSDSPLNENSDESYSEEEEEEEMADSDENGSYGTSSDPADDNKAVAIIKSVGELSVPEKYKSIHQIRPSCAFPVCHDTEERCRLVLSYVLEGLKSVDSSIKKESDLPAADPSTPIPLKYEDESTRGGPEGLEKQMALFLDKMGSLQKGNCSGQSGMTPGSWQHKMKLQLILKSSKAYYILSDAAMSLQKYGRALRYIKLALQSHDTYCCLCTNMLSEVLLFLSQYLTLCGDIQLMLAQNANNRAAHLEEFNYQTKEDQEILHSLHRESSCQGFAWATDLSTDLESQLSVSCKCYEAANEILQFSDLKSQNPEHYVQVLKRMGNIRNEIGVFYMNQAAALQGERVVSKSVSAAEQQLWKKSFSCFEKGIHNFESIDDATNAALLLCNTGRLMRVCAQAHCGAEDEFKREFSPEEGLYYSKAVDYYLKALRSLGTRDMHPVVWDSVNWELSTTYFTMATLQQDYAPLSRKAQEQIEKEVSEAMMKSLKHCDVDSATARQPLCQYRAATIHHRLASMYHSCLRNQVGDEHLRKQHRVLADLHYSKAAKLFQLLKDAPCELLRVQLERVAFAEFQMSSQNSNVGKLKTLSGALDIMVRTEHAFQLIRKELVEECDQPKNDEATPAADSSPNLNREEVIKLLSIFESRLSFLLLQSIKLMSSSKRKMSNTEDDAALQTNKQIYSQLLRATANRNSTLLERIEVVICLLEQLASGSSGSSGSAVP", "length": 1241 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0R4IK17-1", "protein_name": "Erythroid differentiation-related factor 1 isoform X1", "gene_name": "edrf1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSVLNMSSQDKTDTDLRQEEEHSSSEDNKQEGVICLGNNEVKSRAVVKYSAAPPPSSYALLQEKTDLKLPPANWLRENAQLGPAGTTILGSSRKSKPFSSFGMAFDFIDCIGDDVDVVSDSENIKKLLKIPYSKSHVSMAVHRVGSTLLLDELDIQELFMRSSQTNDWTWLKEFYQRLIDQKWQRKKKSKEHWNEKAILSKFLYYSINSDGTAVSVPSDTEQTGDEGCGAGTDGPSWPATFSSSTTDSEESALPKEEQVDTYALGHVSSVPKEQNLPTLFNEGENSQGLRNDFVRNILWTFEDIHMLVGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLMCNVPELVMCFHVNGIVQKYEMIKTEDIPNLENSTFSTRVVKDIAQNILSFLKSNCTKEGHTYWLFKASGSDIVKLYDLTTLCEEAAEEKCQNPFTLPVAVLLYKVASNMMLKKSQNRKIYGTIRTLLLNCIKLLDEDRHPQIIASAHYMLAELFQLDDVSEDEGNGESLRGGGSEDSYSDEDEEDEEEDEDERCSFSTASEPQHDSKAVAVIKSVGELSVPEKYKSTHQIRPNFAYPVSQDKEEKCRLVLSYVLKGLKAVDSSIKKESDLPAADPSTPIPLKYEERSPNGAREVEQEIALLLDRVGPCNEELKVPTRSGMLPGTWQHRMKLQLFLKASKAYYVLSDAATNLLKYGRALRYIKLALQCHDAYCSISGGLHAQVLLFHCQCLSLCGDVQLMLAQNASNRAAYLEEYSYQTKDDQEILHCLHRESSCQAFSMATDLALDPEYQLIVSCKCYEAAHDLLTSGVLKDQAQEQLGQVLKRLGNIRNEMGVFYMNQAAAMQAEKEGGRKKDCTNAKKTRSKSIIFFSGPDQKNPENQATMRRSVCVAEQELWKKSFSCFEKGMQYFSAISDSVNTALLLCNIGRLMRICAQAHCVITSEQSRGEFSPEETLYYNKAIDYYQRALKALGCRESHSAVWDSVNWELSTTYFTLATLLQDYAPLSRKAQEQIEREVTETMMKSLRYCDLQTESARQPLYQYRAATIHHRLASMYHSCYRNQVGDESDRKQHKALAEQHYSKAVRLFVNLSDAPCELLRTLLERVAFAEFTMAGQNSSAVKLKTLTGALEIMCETRHAFRLIHKELLEQQENITKAEEKPEEVPEGSESSSSSELNTEEVLKLIGIFEPSFSFLLLQVIKLSSASKRKLSGKEEEQVKIYKSVYSRLLRAEKSDPLIQRVSLFLELLDQLNPPSGSEEPRSSS", "length": 1270 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0XFQ7-1", "protein_name": "Erythroid differentiation regulatory factor 1", "gene_name": "EDRF1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAELCGLEAAASLRGDAEEPKQGSVLFLGGNEVKSSAVVKYSSAPPQAAFAWLQEKTDLKLPPANWLRESAKLGPAGTTVLGNNKKSTPFSSFGMAYDFIDSIGNDVDVVSDSENIKKLLKIPYSKSHVSMAVHRIGRTLLLDELDIQELFMRSSQTGDWTWLKEFYQRLIDQKWQRKKKSKEHWYQKAILSKFLYYSINGDGAAQPVPSSSKQHEESAVPGESDEAGRASWPAPFEMPSSLSEDPGASNQGSVPLEPSYIVGHVASAPKEQNLTTLFNDGENSQGLKNDFVRNILWTFEDIHMLVGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLICNVPELVMCFHVNGIVQKYEMIKTEDIPNLENSNFSTKVIKDIAQNILSFLKSNCTKEGHTYWLFKASGSDIVKLYDLTTLCEETEDKYQNPFTMPVAILLYKVACNMMLKKNQNKKHYGTIRTLLLNCLKLLDNGRHPQIIASANYMLSELFQLDEPKKEDNTDFPINGNSDESYSEEEEEMPDSDENGSYSNSSDPPDDNKAVAIIKSVGELSVPEKYKSVHRIRPSCAFPVCHGAEERCRLVLSYVLEGLKSVDSSVKKESDLPAADPSTPIPLKYEDESTSGGPECLEKQMALFLDKMGSFQKDKHSSQSGMIPGSWQYKMKLQLILKSSKAYYVLSDAAMILQKYGRALRYIKLALQCHDTYCCLSASMLPEVLVFLCQCLTLCGDIQLMLAQNANNRAAYLEEYNYQTKEDQEILHSLHRESSCQVFAWATDLSTDLECQLSVSCKCYEAAYEILLFSNLKKQNPEQRVQVLKRMGNIRNEIGVFYMNQAAAVQTERVVSKNVSTTEQQLWKKSFSCFEKGIQNFESIDDATNAALLLCNTGRLMRICAQAHCATEGDFKREFSPEEALYYNKAIDYYLKALRSLGKREMHPAVWDSVNWELSTTYFTMATLQQDYAPLSRKAQEQIEKEVSEAMMKSLKYCDVDTVSPRQPLCQYRAATIHHRLASMYHSCLRNQVGDEHLRKQHRVLADLHYSKAVRLFQLLKDAPCELLRVQLERVAFAEFQMASQNSSAGKLKTLFGALDIMAKTKCAFQLIRKDLAAESEQISKGESNAESLSPNESSTALNKEEVMKLLSIFESRMSFLLLQSIKLLTSTKKKTGGVNEEEVTLKTNKQVYSLLLRATANKSMTLLERIEVILNLLEQLSQNSEASNGGIQ", "length": 1229 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7FS23-1", "protein_name": "Erythroid differentiation-related factor 1 isoform X1", "gene_name": "Edrf1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGDPKEAGAEASPPGAAARGGLSLLSQAESEEPSSAQGSALFLGGNEVKSRAVVKYSSAPPRTAFARLEEKTDLKLPPANWLRESAKLGPAGTTILGNSKKSKPFSSFGMAYDFIDSVGNDVDVVSDSENIKKLLKIPYSKSHVSMAVHRIGRTLLLDELDIQELFMRSSQTGDWTWLKEFYQRLIDQKWQRKKKSKEHWYQKAILSKFLYYSINGDGAAQPVPSPAEQQESSSSDQTHDSEGASWPAPFEMPSSVSEDPSASSQGREPLEPSCIVGHVASAPKEQNLTTLFNDGENSQGLKNDFVRNILWTFEDIHMLVGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLICNVPELVMCFHVNGIVQKYEMIKTEEIPNLENSNFSTKVIKDIAQNILSFLKSNCTKEGHTYWLFKASGSDIVKLYDLTTLCEETEDKYQNPFTMPVAILLYKVACNMMMKKNQNKKHYGTIRTLLLNCVKLLDKSRHPQIIASANYMLSELFQLDEPKKEENSDSPLNENSDESYSEEEEEMPDSDENGSYGTSSDPADDNKAVAIIKSVGELSVPEKYKSIHQIRPSCAFPVCHDTEERCRLVLSYVLEGLKSVDSSIKKESDLPAADPSTPIPLKYEDESTRGGPEGLEKQMALFLDKMGSLQKGNCSGQSGMTPGSWQHKMKLQLILKSSKAYYILSDAAMSLQKYGRALRYIKLALQSHDTYCCLCTNMLSEVLLFLSQYLTLCGDIQLMLAQNANNRAAHLEEFNYQTKEDQEILHSLHRESSCQGFAWATDLSTDLESQLSVSCKCYEAANEILQFSDLKSQNPEHYVQVLKRMGNIRNEIGVFYMNQAAALQGERVVSKSVSAAEQQLWKKSFSCFEKGIHNFESIDDATNAALLLCNTGRLMRVCAQAHCGAEDEFKREFSPEEGLYYSKAVDYYLKALRSLGTRDMHPVVWDSVNWELSTTYFTMATLQQDYAPLSRKAQEQIEKEVSEAMMKSLKHCDVDSATARQPLCQYRAATIHHRLASMYHSCLRNQVGDEHLRKQHRVLADLHYSKAAKLFQLLKDAPCELLRVQLERVAFAEFQMTSQNSNVGKLKTLSGALDIMVKTDHAFQLIRKELVEECDQPKNNEATPAADSSPNLNQEEVIKLLSIFESRLSFLLLQSIKLLSSSKKKMSSNTEEDTVLQTNKQIYSQLLRATANRNSTLLERIDVIICLLEQLASGSSGSSGSAVA", "length": 1240 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9TFU8-1", "protein_name": "Erythroid differentiation regulatory factor 1", "gene_name": "EDRF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MADSKEAGAEAPPAGAAARGGLSLLSQGESEEPSAQGSALFLGGNEVKSRAVVKYSSAPPRTAFARLEEKTDLKLPPANWLRESAKLGPAGTTILGNSRKSKPFSSFGMAYDFIDSVGNDVDVVSDSENIKKLLKIPYSKSHVSMAVHRIGRTLLLDELDIQELFMRSSQTGDWTWLKEFYQRLIDQKWQRKKKSKEHWYQKAILSKFLYYSINGDGAAQPVPSATEQQESSSSDQTNDSDGASWPAPFEMPSSVSEDPSASSQGSEPLEPSYIVGHVASAPKEQNLTPLFNDGENSQGLKNDFVRNILWTFEDIHMLVGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLICNVPELVMCFHVNGIVQKYEMIKTEEIPNLENSNFSTKVIKDIAQNILSFLKSNCTKEGHTYWLFKASGSDIVKLYDLTTLCEETEDKYQNPFTMPVAILLYKVACNMMMKKNQNKKHYGTVRTLLLNCVKLLDKSRHPQIIASANYMLSELFQLDEPKKEESSESPLNENSDESYSEEEEEMPDSDENGSYSTSSDPSDDNKAVAIIKSVGELSVPEKYKSIHQIRPSCAFPVCHDTEERCRLVLSYVLEGLKSVDSSIKKESDLPAADPNTPIPLKYEDESTRGGPEGLEKQMALFLDKMGSLQKGNYSSQSGMIPGSWQHKMKLQLILKSSKAYYVLSDAAMSLQKYGRALRYIKLALQSHDTYCCLCTNMLSEVLLFLSQYLTLCGDIQLMLAQNASNRAAHLEEFNYQTKEDQEILHSLHRESSCQGFAWATDLSTDLESQLSVSCKCYEAANEILQFSDLKSQNPEHYVQVLKRMGNIRNEIGVFYMNQAAALQSERLVSKTVSTAEQQLWKKSFSCFEKGIHNFESIDDATNAALLLCNTGRLMRICAQAHCGAGDEFKREFSPEEGLYYNKAVDYYLKALRSLGTRDIHPAVWDSVNWELSTTYFTMATLQQDYAPLSRKAQEQIEKEVSEAMMKSLKYCDVDSVSARQPLCQYRAATIHHRLASMYHSCLRNQVGDEQLRKQHRVLADLHYSKAGKLFQLLKDAPCELLRVQLERVAFAEFQMTSQNSNVGKLKTLSGALDIMVRTKHAFQLIRKELVEEFEQPKSEETPPAADSSPSLNREEVTKLLSIFESRLSFLLLQSIKLLSSTKKKTSSILDEDIVLKTNKQVYSQLLRATANKNASLLERVDLLIHLLDQLACGRGSSAVVQ", "length": 1237 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3B7T1-1", "protein_name": "Erythroid differentiation-related factor 1", "gene_name": "EDRF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDAKEAGAEGPPAGAAARGGLSLLSQGESEESSAQGSALFLGGNEVKSRAVVKYSSAPPRTAFARLEEKTDLKLPPANWLRESAKLGPAGTTILGNSKKSKPFSSFGMAYDFIDSVGNDVDVVSDSENIKKLLKIPYSKSHVSMAVHRIGRTLLLDELDIQELFMRSSQTGDWTWLKEFYQRLIDQKWQRKKKSKEHWYQKAILSKFLYYSINGDGAAQPVSSTAEQQESSSSDQTNDSEGASWPAPFEMPSSVSEDPSASSQGSEPLEPSYIVGHVASAPKEQNLITLFNDGEHSQGLKNDFVRNILWTFEDIHMLVGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLICNVPELVMCFHVNGIVQKYEMIKTEEIPNLENSNFSTKVIKDIAQNILSFLKSNCTKEGHTYWLFKASGSDIVKLYDLTTLCEETEDKYQNPFTMPVAILLYKVACNMMMKKNQNKKHYGTIRTLLLNCLKLLDKSRHPQIIASANYMLSELFQLDEPKKEENSESPLNENSDESYSEEEEEMPDSDENGSYSTSSDPSDDSKAVAIIKSVGELSVPEKYKSIHQIRPSCAFPVCHDTEERCRLVLSYVLEGLKSVDSSIKKESDLPAADPSTPIPLKYEDESSRGGPEGLEKQMALFLDKMGSLQKGNYSSQSGMIPGSWQHKMKLQLILKSSKAYYVLSDAAMSLQKYGRALRYIKLALQSHDTYCCLCTNMLSEVLLFLSQYLTLCGDIQLMLAQNANNRAAHLEEFHYQTKEDQEILHSLHRESSCQGFAWATDLSTDLESQLSVSCKCYEAANEILQFSDLKSQNPEHYVQVLKRMGNIRNEIGVFYMNQAAALQSERLVSKSVSAAEQQLWKKSFSCFEKGIHNFESIEDATNAALLLCNTGRLMRICAQAHCGAGDELKREFSPEEGLYYNKAIDYYLKALRSLGTRDIHPAVWDSVNWELSTTYFTMATLQQDYAPLSRKAQEQIEKEVSEAMMKSLKYCDVDSVSARQPLCQYRAATIHHRLASMYHSCLRNQVGDEHLRKQHRVLADLHYSKAAKLFQLLKDAPCELLRVQLERVAFAEFQMTSQNSNVGKLKTLSGALDIMVRTEHAFQLIQKELIEEFGQPKSGDAAAAADASPSLNREEVMKLLSIFESRLSFLLLQSIKLLSSTKKKTSNNIEDDTILKTNKHIYSQLLRATANKTATLLERINVIVHLLGQLAAGSAASSNAVQ", "length": 1238 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6GQV7-1", "protein_name": "Erythroid differentiation-related factor 1", "gene_name": "Edrf1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGDPKEAGAEASPSGAAARGGLSLLSQADSEEPSAQGSALFLGGNEVKSRAVVKYSSAPPRTAFARLEEKTDLKLPPANWLRESAKLGPAGTTILGNSKKSKPFSSFGMAYDFIDSVGNDVDVVSDSENIKKLLKIPYSKSHVSMAVHRIGRTLLLDELDIQELFMRSSQTGDWTWLKEFYQRLIDQKWQRKKKSKEHWYQKAILSKFLYYSINGDGAAQPVPSPAEQEESSSSQQTHESEGAAWPAPFEMPSSVSEDPSASSQGREPLEPSCIVGHVASAPKEQNLTTLFNDGENSQGLKNDFVRNILWTFEDIHMLVGSNMPIFGGGRYPAVSLRLRDNNKPINVLTGIDYWLDNLICNVPELVMCFHVNGIVQKYEMIKTEEIPNLENSNFSTKVIKDIAQNILSFLKSNCTKEGHTYWLFKASGSDIVKLYDLTTLCEETEDKYQNPFTMPVAILLYKVACNMMMKKNQNKKHYGTIRTLLLNCVKLLDKSRHPQIIASANYMLSELFQLDEPKKEESSDSPLNENSDESYSEEEEEMADSDENGSYSTSSDPADDNKAVAIIKSVGELSVPEKYKSIHQIRPSCAFPVCHDTEERCRLVLSYVLEGLKSVDSSIKKESDLPAADPSTPIPLKYEDESTRGGPEGLEKQMALFLDKMGSIQKGSCSGQSGMTPGSWQHKMKLQLILKSSKAYYILSDAAMSLQKYGRALRYIKLALQSHDTYCCLCTNMLSEVLLFLSQYLTLCGDIQLMLAQNANNRAAHLEEFNYQTKEDQEILHSLHRESSCQGFAWATDLSTDLESQLSVSCKCYEAANEILQFSDLKSQNPEHYVQVLKRMGNIRNEIGVFYMNQAAALQGERVVSKSVSAAEQQLWKKSFSCFEKGIHNFESIDDATNAALLLCNTGRLMRVCAQAHCGAEDEFKREFSPEEGLYYSKAVDYYLKALRSLGTRDMHPIVWDSVNWELSTTYFTMATLQQDYAPLSRKAQEQIEKEVSEAMMKSLKHCDVDSATARQPLCQYRAATIHHRLASMYHSCLRNQVGDEHLRKQHRVLADLHYSKAAKLFQLLKDAPCELLRVQLERVAFAEFQMSSQNSNVGKLKTLSGALDIMVRTEHAFQLIRKELVEECDQPKNDEATPAADSSPNLNREEVIKLLSIFESRLSFLLLQSIKLMSSSKRKMSSNAEEDIVLQTNKQIYSQLLRATANRNSTLLERIEVVICLLEQLASGSSRSSGSAVP", "length": 1239 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VSP0-1", "protein_name": "Erythroid differentiation-related factor 1", "gene_name": "Dmel\\CG6511", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEDRNEEIEPCRSIGPHELDVVKSQAVIKLSPVPVPAHFKRLECNTNLNLPPLNWLTTSHSSHGLHQALYQSAGFASFRLGQMFPDCVGEVDVVSDAENIKQLLKLPYSAKSAISMVVHKVGNTLLLDEFDIQKYLLRKADDDWKWLRSFILEHVLTYGDTQHNYCLKERSREALQTKNLLSKFLYHSLKQTGDELDYDVANTPTQLTSRKQGLPITGPVLPEPKIEENVPDPKSSHAFNRNVVWTFEDIRMLIGTDMPIFGGPNRPCISLRLRDAAQPINVLTGIDYWLDNLMCNVPEVVMCYHLDGIVQKYEIIKTEDLPYLENSQFSPQVVRNVAQNILAFLKANATKAGHTYWLFKGRNDDVVKLYDLTTLCQSQASEKSDEDPPEQQVNPFTVPVGMLLYSVARNMKNTLPHISPKAAGNIRALLDNCIKLLPKEQYPQIVSSSHYILSDLHVPAGIDPKAPKFEEVDSDDQSLYDDDEEEDEEDYEDDVLDYSSEKSYQSSEQSGGKANVAVRHICDALRDFKSHAKKSKPAPLIATTAERCSFSLEHISAGLSCLQYFNGSQEEKLKESETNAKQEEKRRILHEEQNPNMAKPCSAIPLPYEQLKVSQQPTQVVKKPNSKTQAKRSKSKELTTTTKSKSANASNQQMSAKFNTQHFGSWNVHLKLLLLEKACLTFATLAEHYYESRRYGSTLRSIELACRCQQVLNKYMANVVSQYSCLLGRAGDCFFQISKNWESIEEYIQQFGELDPSMDFIGDELAQELEGEEEELPSLAPSNNVEQVMLHSCKCYEQALEHAQKAESNELLRRLGNVRNELGLKYMYWAQEEYSELMKKKESTKDAGNDQTEDSPTADPSEPLYVKLTVNSYDCLRRGIEAFTAVKDNVNLAFLYCNIGRFMRLRAHLIMPNESAITLESQKAFYNEAFSYYVKAKDCLDTRKANPELWDLVHWELSTATFTLAKQLQDHSAADKSSLVDASKEVLELLQKSLRLCDVEHPGARQVLYSFRSGLIHKRIASFHYSQLRSHGCCDFSQLPKSTLQLCKYHYEKATQILESLKEVGDLLVVQLERISLHEFLAELSTHTAQKIKQMQAALEICLQCHLIFAHVIDTNSGQVADDEFAGHLTLFESRLQNALKTLTKLTLAGKDPKQLSKLYKRMYMETLTGKHGLGAQQSSTACLKHLHMLLARLRAMCETQLAPRPAVRVF", "length": 1211 }, "evidence": [ { "id": "F1SDM8", "url": "https://omabrowser.org/oma/group/F1SDM8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of DNA-templated transcription", "id": "GO:0045893", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045893", "evidence": [ { "database": "UniProtKB", "id": "F1SDM8", "url": "https://www.uniprot.org/uniprotkb/F1SDM8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1209, "end_pos": 1211, "annotation": "n_glycosylation_sequon" }, { "start_pos": 238, "end_pos": 240, "annotation": "n_glycosylation_sequon" }, { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" }, { "start_pos": 393, "end_pos": 395, "annotation": "n_glycosylation_sequon" }, { "start_pos": 413, "end_pos": 415, "annotation": "n_glycosylation_sequon" }, { "start_pos": 548, "end_pos": 550, "annotation": "n_glycosylation_sequon" }, { "start_pos": 668, "end_pos": 670, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SDM8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1236, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SDM8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SDM8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SDM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDM8" }, { "id": "PF23788", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23788" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EDRF1 N-terminal", "eco_id": "ECO_0000259", "start_pos": 46, "end_pos": 560, "start_aa": 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A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDN7", "url": "https://www.uniprot.org/uniprotkb/F1SDN7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A6NJV1-1", "protein_name": "Ciliary microtubule inner protein 2C", "gene_name": "CIMIP2C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASRSAGTLLTEFNAAYVPPGLMPGYQGHVPTVAFSFGAPYGTTTLKYFQDHRNRAMEKSHTPFSQGGHFPTIFSTNPNLLLMERASTRDRWLHKPSYTRFNLDSHRSTELTNFYQMVQQHRKYYQDKTGTVPRVPYFAMPVREPERYPLPTVLPPLCPKKKWHLLRLAPENLKTYQTFPSGKRVSPQERKKRDCYFEFRA", "length": 201 }, "evidence": [ { "id": "F1SDN7", "url": "https://omabrowser.org/oma/group/F1SDN7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3ZW52-1", "protein_name": "Ciliary microtubule inner protein 2C", "gene_name": "Cimip2c", "tax_id": 10116, "organism": "Rattus norvegicus", 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"https://www.uniprot.org/uniprotkb/F1SDQ2#function" }, { "database": "UniProtKB", "id": "ARBA00053443", "url": "https://www.uniprot.org/uniprotkb/ARBA00053443#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DPYSL5", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2", "locus": { "chromosome": "3", "start_pos": 112156676, "end_pos": 112252968, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008560", "url": "https://www.ensembl.org/id/ENSSSCG00000008560" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008560", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008560", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01314", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01314", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511810", "url": "https://www.ncbi.nlm.nih.gov/gene/100511810", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011059", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011059", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011778", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011778", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032466", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032466", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050378", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050378", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511810", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511810", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CEHTPSI", "url": "https://omabrowser.org/oma/group/CEHTPSI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SDQ2", "url": "https://www.orthodb.org/?gene=F1SDQ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11647", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11647", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11647:SF58", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11647:SF58", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01979", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01979", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-399956", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-399956", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003125368", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125368", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDQ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGAIPRVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVTGVQDRMSVIWERGVVGGKMDENRFVAVTSSNAAKILNLYPRKGRIIPGADADVVVWDPEATKTISGSTQVQGGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVKGVDRTPYLGDVAIVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRASARILAPPGGRSSGIW", "length": 564, "header": "tr|F1SDQ2-1|F1SDQ2_PIG Isoform 1 of Dihydropyrimidinase-related protein 5 OS=Sus scrofa OX=9823 GN=DPYSL5 PE=1 SV=3 CANONICAL=F1SDQ2-1" }, "isoforms": [ { "isoform_ac": "F1SDQ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2/entry#F1SDQ2-1", "sequence": { "sequence": "MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGAIPRVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVTGVQDRMSVIWERGVVGGKMDENRFVAVTSSNAAKILNLYPRKGRIIPGADADVVVWDPEATKTISGSTQVQGGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVKGVDRTPYLGDVAIVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRASARILAPPGGRSSGIW", "length": 564, "header": "tr|F1SDQ2-1|F1SDQ2_PIG Isoform 1 of Dihydropyrimidinase-related protein 5 OS=Sus scrofa OX=9823 GN=DPYSL5 PE=1 SV=3 CANONICAL=F1SDQ2-1" }, "locus": { "chromosome": "3", "start_pos": 112212405, "end_pos": 112158378, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009365.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009365.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009125.3", "url": "https://www.ensembl.org/id/ENSSSCP00000009125.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511810", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511810", "resource": "KEGG Pathway" }, { "id": "R-SSC-399956", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-399956", "resource": "Reactome", "description": "CRMPs in Sema3A signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MQM4-1", "protein_name": "Dihydropyrimidinase-related protein 5", "gene_name": "Dpysl5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVEAYEKCRGLADPKVCCDYALHVGITWWSPKVKAEMETLVRENGVNSFQMFMTYKDLYMLRDSELYQVFHACRDFGAIPRVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTNAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGGKMDENRFVAVTSSNAAKILNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDIVYKKLVQREKTLKVRGVDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRASARILAPPGGRSSGIW", "length": 564 }, "evidence": [ { "id": "F1SDQ2", "url": "https://omabrowser.org/oma/group/F1SDQ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0Y1Z9-1", "protein_name": "Dihydropyrimidinase-related protein 5", "gene_name": "LOC107053190", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLANAASVRILIKGGKVVNDDCSMEADVYIENGIIQQVGRELMIPGGAKVIDASGKLVIPGGIDTSTHFHQTFMNATCLDDFYHGTKAALVGGTTMVLGHVLPAKERSLVDAFERCRALADPQVCCDYALHVGVTWWAPQVKAEMETLVREKGVNSFQMFLAYKELYMLRDGELYQALRACRDIGAIARVHAENGDLVAEGAKEALELGITGPEGIEISRPEELEAEATHRAITIANRTHCPVYLVNVSSMAAGDVIAAAKMQGKAVYAETTTAHATLTGLHYYHQDWFHAAAYVTVPPLRLDTNTSAHLLSLLASDTLNVVASDHRPFSAKQKAMGREDFTKIPHGVSGVQDRMNIIWERGVVGGKMDENRFVAVTSSNAAKLHNLYPRKGRIVPGADADVVVWDPEATRTISASTQVQGGDVNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGRFCPLRSFPDCVYKKLVQREKSLKPRAVDRSPYLGDVAAVVHAGKKETGTPLADTPTRPATRHGGMRDLHESSFSLSGSQIDDHVPKRASARILAPPGGRSSGIW", "length": 564 }, "evidence": [ { "id": "F1SDQ2", "url": "https://omabrowser.org/oma/group/F1SDQ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9BPU6-1", "protein_name": "Dihydropyrimidinase-related protein 5", "gene_name": "DPYSL5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGAIARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRGVDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRASARILAPPGGRSSGIW", "length": 564 }, "evidence": [ { "id": "F1SDQ2", "url": "https://omabrowser.org/oma/group/F1SDQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9EQF6-1", "protein_name": "Dihydropyrimidinase-related protein 5", "gene_name": "Dpysl5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLANSASVRILIKGGKVVNDDCTHEADVYIESGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVEAYEKCRALADPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVFHACRDIGAIPRVHAENGELVAEGAKEALDLGITGPEGIEISHPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTNAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVVWERGVVGGKMDENRFVAVTSSNAAKILNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDIVYKKLVQREKTLKVRGVDRTPYLGDVAIVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRASARILAPPGGRSSGIW", "length": 564 }, "evidence": [ { "id": "F1SDQ2", "url": "https://omabrowser.org/oma/group/F1SDQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JHU0-1", "protein_name": "Dihydropyrimidinase-related protein 5", "gene_name": "Dpysl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVEAYEKCRALADPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVFHACRDFGAIPRVHAENGELVAEGAKEALDLGITGPEGIEISHPEELEAEATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTNAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVVWERGVVGGKMDENRFVAVTSSNAAKILNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDIVYKKLVQREKTLKVRGVDRTPYLGDVAVVVNPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPKRASARILAPPGGRSSGIW", "length": 564 }, "evidence": [ { "id": "F1SDQ2", "url": "https://omabrowser.org/oma/group/F1SDQ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "pmid": "" }, { "name": "neuronal cell body", "id": "GO:0043025", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043025", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of dendrite morphogenesis", "id": "GO:0050774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050774", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "pmid": "" }, { "name": "neuron differentiation", "id": "GO:0030182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030182", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides", "id": "GO:0016812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016812", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ2", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 237, "end_pos": 239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 247, "end_pos": 249, "annotation": "n_glycosylation_sequon" }, { "start_pos": 305, "end_pos": 307, "annotation": "n_glycosylation_sequon" }, { "start_pos": 316, "end_pos": 318, "annotation": "n_glycosylation_sequon" }, { "start_pos": 75, "end_pos": 77, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SDQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" }, { "id": "PF01979", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01979" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Amidohydrolase-related", "eco_id": "ECO_0000259", "start_pos": 57, "end_pos": 446, "start_aa": "Leu", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [ { "evidence": [ { "id": "F1SDQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2#function" }, { "id": "F1SDQ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDQ2" }, { "id": "PIRSR611778-2", 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"field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", 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"https://www.uniprot.org/uniprotkb/F1SDQ7#function" }, { "database": "UniProtKB", "id": "ARBA00055899", "url": "https://www.uniprot.org/uniprotkb/ARBA00055899#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SDQ7", "url": "https://www.uniprot.org/uniprotkb/F1SDQ7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MATN4", "url": "https://www.uniprot.org/uniprotkb/F1SDQ7", "locus": { "chromosome": "17", "start_pos": 47617620, "end_pos": 47630458, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007391", "url": "https://www.ensembl.org/id/ENSSSCG00000007391" } ] } } ], "crossref": [ { "id": "F1SDQ7", "url": "https://alphafold.ebi.ac.uk/entry/F1SDQ7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007391", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007391", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd01475", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01475", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002035", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002035", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009030", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009030", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019466", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019466", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050525", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050525", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "RSCSMID", "url": "https://omabrowser.org/oma/group/RSCSMID/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24020", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24020", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24020:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24020:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00092", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00092", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07645", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10393", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10393", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14670", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14670", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SDQ7", "url": "https://www.uniprot.org/uniprotkb/F1SDQ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SDQ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRGLLGLLLPLLLLLLQPWETQLQFAGPRCRTGPLDLVFVIDSSRSVRPFEFETMRQFLVGLLRSLDVGPNATRVGVIQYSSQVQSVFPLGAFSRREDMEGAIRALVPLAQGTMTGLAIQYAMNVAFSVAEGARPPEARVPRVAVIVTDGRPQDRVAEVAAQARSRGIEIYAVGVQRADVGSLRAMASPPLDEHVFLVESFDLIQEFGQQFQGRLCRKDLCAEGGHGCQHQCVSAPGTFHCACNPGYRLAADNKSCLAINLCAEETHGCEHHCVSSPGSYFCHCRAGFVLQQDQRSCRAIDYCGFGNHSCQHECVNTFGGPRCRCREGHDLLPDGRSCQARDLCNGVDHGCEFQCVSEGLSYRCLCPEGQQLLADGKSCNRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARPRALNVPRVGLVFTDGRSQDDVSVWAARAKEEGIVMYAVGVGKAVEEELREIASEPAELHVSYSPDFSTMTHLLENLKGSICPEEGIGAGTELRSPCECDSLVEFQGRTLGALESLSQNLAQLTARLEELENQLAAQK", "length": 624, "header": "tr|F1SDQ7-1|F1SDQ7_PIG Isoform 1 of Matrilin-4 OS=Sus scrofa OX=9823 GN=MATN4 PE=4 SV=3 CANONICAL=F1SDQ7-1" }, "isoforms": [ { "isoform_ac": "F1SDQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SDQ7/entry#F1SDQ7-1", "sequence": { "sequence": "MRGLLGLLLPLLLLLLQPWETQLQFAGPRCRTGPLDLVFVIDSSRSVRPFEFETMRQFLVGLLRSLDVGPNATRVGVIQYSSQVQSVFPLGAFSRREDMEGAIRALVPLAQGTMTGLAIQYAMNVAFSVAEGARPPEARVPRVAVIVTDGRPQDRVAEVAAQARSRGIEIYAVGVQRADVGSLRAMASPPLDEHVFLVESFDLIQEFGQQFQGRLCRKDLCAEGGHGCQHQCVSAPGTFHCACNPGYRLAADNKSCLAINLCAEETHGCEHHCVSSPGSYFCHCRAGFVLQQDQRSCRAIDYCGFGNHSCQHECVNTFGGPRCRCREGHDLLPDGRSCQARDLCNGVDHGCEFQCVSEGLSYRCLCPEGQQLLADGKSCNRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARPRALNVPRVGLVFTDGRSQDDVSVWAARAKEEGIVMYAVGVGKAVEEELREIASEPAELHVSYSPDFSTMTHLLENLKGSICPEEGIGAGTELRSPCECDSLVEFQGRTLGALESLSQNLAQLTARLEELENQLAAQK", "length": 624, "header": "tr|F1SDQ7-1|F1SDQ7_PIG Isoform 1 of Matrilin-4 OS=Sus scrofa OX=9823 GN=MATN4 PE=4 SV=3 CANONICAL=F1SDQ7-1" }, "locus": { "chromosome": "17", "start_pos": 47627647, "end_pos": 47617861, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008090.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008090.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007874.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007874.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDQ7", "url": "https://www.uniprot.org/uniprotkb/F1SDQ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZEN6-1", "protein_name": "Matrilin 4", "gene_name": "MATN4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKLLPLAALLLLILTALEARPKPAALKCRTGPLDIVFVIDSSRSVRPFEFETMRRFMIDIIGNLDVGPNATRVGVIQYSSQVQNIFSLKTFFTRAEMERAINSIVPLAQGTMTGLAIQYAMNVAFTVQEGARPPHKKIPRIAIIVTDGRPQDRVSEVAAHARNAGIEIYAVGIQRADMNSLRAMASPPLEEHVFLVESFELIQQFGKQFQDKLCGVDMCMERDHGCQHSCVSTPGSFYCECHPGYQLNVDGKTCSPIDACADGRHGCEHHCISARGTYSCRCRAGYYLNQDRRSCTMIDYCSFGNHSCQHDCVSIPAGHRCRCRDGFMLQHDGKSCRAIDLCNGVDHGCEFKCVSSEGSFHCVCPEGQQLQADGKTCSKCGAGHVDLVMVIDGSKSVRPQNFELVKQFVNRIVDLLEVSPDGTHVGLVQYSSRVRTEFPLNKYHSAEEIKAAVMKMEYMEKGTMTGLALKHMVEHSFSELEGARPLSHNVPRIGLVFTDGRSQDDISEWAQRAKESGIVMFAVGVGKAVEEELRAIASEPVEQHFSYSADFTTMTHLVENFKLNICPEEGRGETEIRSPCECEALVQFQTNTVAILQSLTERIAQMTARLEALEKQIALKK", "length": 621 }, "evidence": [ { "id": "F1SDQ7", "url": "https://omabrowser.org/oma/group/F1SDQ7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZMS3-1", "protein_name": "Matrilin-4", "gene_name": "Matn4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKGPFCWPLPLLLLFLQSWETQLQPAGPRCYTGPLDLVFMIDSSRSVRPFEFETMRQFLVGLLHSLDVGLNATRVGVIQYSSQVQSVFPLGAFSNREDMERAIRAVVPLAQGTMTGLAIQYAMNVAFSEAEGARPSEERVPRVLVIVTDGRPQDRVAEVAAQARARGIEIYAVGVQRADVGSLRAMASPPLDQHVFLVESFDLIQEFGLQFQGRLCGKDLCAELEHGCQHLCVNAPGTFYCACNSGYKLAPDNRNCLAIDLCAEGTHGCEHLCVSSVDSYFCRCRAGFALQQDQRSCRAIDYCSFGNHSCQHECVSTLVGPQCRCREGHDLLPDGRSCQVRDFCNGVDHGCEFQCVSEGLSFHCLCPEGRRLQADGKSCDRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEVQGARPRDLNVPRVGLVFTDGRSQDDISVWAARAKEEGIVMYAVGVGKAVEEELREIASEPSELHVSYSPDFNTMTHLLENLKGSICPEEGISAGTELRSPCECESLVEFQGRTLGALESLTQNLARLTERLEELENQLASRK", "length": 624 }, "evidence": [ { "id": "F1SDQ7", "url": "https://omabrowser.org/oma/group/F1SDQ7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O89029-1", "protein_name": "Matrilin-4", "gene_name": "Matn4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRGPCCWPLSLLLLFLQSWETQLQSAGPRCYNGPLDLVFMIDSSRSVRPFEFETMRQFLVGLLRSLDVGLNATRVGVIQYSSQVQSVFPLGAFSRREDMERAIRAVVPLAQGTMTGLAIQYAMNVAFSEAEGARPSEERVPRVLVIVTDGRPQDRVAEVAAQARARGIEIYAVGVQRADVGSLRTMASPPLDQHVFLVESFDLIQEFGLQFQGRLCGKDLCAELVHGCQHLCVNAPGTFYCACNSGYKLAPDNKNCLALDLCAEGTHGCEHLCVNSVDSYFCRCRAGFALQQDQRSCRAIDYCSFGNHSCQHECVSTLAGPQCRCREGHDLLPDGRSCRVRDFCNGVDHGCEFQCVSEGLSFHCLCPEGRRLQADGKSCDRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARPRDLNVPRVGLVFTDGRSQDDISVWAARAKEEGIVMYAVGVGKAVEEELREIASEPSELHVSYSPDFSTMTHLLENLKGSICPEEGIGAGTELRSPCECESLVEFQGRTLGALESLTQNLARLTERLEELENQLASRK", "length": 624 }, "evidence": [ { "id": "F1SDQ7", "url": "https://omabrowser.org/oma/group/F1SDQ7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O95460-1", "protein_name": "Matrilin-4", "gene_name": "MATN4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRGLLCWPVLLLLLQPWETQLQLTGPRCHTGPLDLVFVIDSSRSVRPFEFETMRQFLMGLLRGLNVGPNATRVGVIQYSSQVQSVFPLRAFSRREDMERAIRDLVPLAQGTMTGLAIQYAMNVAFSVAEGARPPEERVPRVAVIVTDGRPQDRVAEVAAQARARGIEIYAVGVQRADVGSLRAMASPPLDEHVFLVESFDLIQEFGLQFQSRLCGKDQCAEGGHGCQHQCVNAWAMFHCTCNPGYKLAADNKSCLAIDLCAEGTHGCEHHCVNSPGSYFCHCQVGFVLQQDQRSCRAIDYCSFGNHSCQHECVSTPGGPRCHCREGHDLQPDGRSCQVRDLCNGVDHGCEFQCVSEGLSYRCLCPEGRQLQADGKSCNRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDVSPEGTRVGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFSEAQGARPRALNVPRVGLVFTDGRSQDDISVWAARAKEEGIVMYAVGVGKAVEAELREIASEPAELHVSYAPDFGTMTHLLENLRGSICPEEGISAGTELRSPCECESLVEFQGRTLGALESLTLNLAQLTARLEDLENQLANQK", "length": 622 }, "evidence": [ { "id": "F1SDQ7", "url": "https://omabrowser.org/oma/group/F1SDQ7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46728:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00240", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00240", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01428", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01428", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001289601", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001289601", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SDV0", "url": "https://www.uniprot.org/uniprotkb/F1SDV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SDV0-1", "url": "https://www.uniprot.org/uniprotkb/F1SDV0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFKADLARTGIQLPATYSRGIRKVKIMDNRKDPPFFNEDNVGPFYYKLPFYDTMELFIETLTGTCFELRVSPFEAIIYVKAKIQRLEGIPICQQHLIWNNMELEDDYCLSDYNISEGCTLKLVLAMRGGPINTRRVPMEDPLREMAEYMDSSRDEGWEKTSCNKQVTFLVYREGDQLNFFRVVDRGDGTLTPLSESLSGGSVYNLHADEDEEIEPSPSGQQIIENSITMNKMKLLKAKMENMNLSKKPKKAIKVKPRPPIAPRPSSCSTAAARHRLLRVLPHIGQSCLPSPRNACLHDSTSNAISSLGTLPPADRPISSIASDFLKEDDNWESNTLSHSNSGFKLPPEICHTESESDKELADSVAHLGLSLPRRTKLFSGNFPPNNEDDTVLFSTSEECVTEESLLPEVGSFASCTEGNADEQSSGLEGTRKVNREFLLTNDDKGLKATEQHLKHVARVLSGESVETTVLNNRELSPHKNRLLSPLRCSAPMALHNSLVKPQRRSKCFESGNLQSSASQNVLRSLDVRNITDSSFSRTTRFRAVKVDSPGKRSDIISKVEARDITEMANKASKEPVGCVNNIGFLASLARSASRDSLQSTRGAGRLRTSGTGLSTKLQHFQEESLRKSSPQLEPSEFFLSTRGTGMNGNNTATGKRVGECTHHLPPVKAPIQTKKKTAKHCFLCGKKTGLATSYECRCGNNFCASHRYAETHSCTYDYKSAGRRYLQEANPVVNAPKLPKI", "length": 741, "header": "tr|F1SDV0-1|F1SDV0_PIG Isoform 1 of Zinc finger AN1-type containing 4 OS=Sus scrofa OX=9823 GN=ZFAND4 PE=4 SV=3 CANONICAL=F1SDV0-1" }, "isoforms": [ { "isoform_ac": "F1SDV0-1", "url": "https://www.uniprot.org/uniprotkb/F1SDV0/entry#F1SDV0-1", "sequence": { "sequence": "MFKADLARTGIQLPATYSRGIRKVKIMDNRKDPPFFNEDNVGPFYYKLPFYDTMELFIETLTGTCFELRVSPFEAIIYVKAKIQRLEGIPICQQHLIWNNMELEDDYCLSDYNISEGCTLKLVLAMRGGPINTRRVPMEDPLREMAEYMDSSRDEGWEKTSCNKQVTFLVYREGDQLNFFRVVDRGDGTLTPLSESLSGGSVYNLHADEDEEIEPSPSGQQIIENSITMNKMKLLKAKMENMNLSKKPKKAIKVKPRPPIAPRPSSCSTAAARHRLLRVLPHIGQSCLPSPRNACLHDSTSNAISSLGTLPPADRPISSIASDFLKEDDNWESNTLSHSNSGFKLPPEICHTESESDKELADSVAHLGLSLPRRTKLFSGNFPPNNEDDTVLFSTSEECVTEESLLPEVGSFASCTEGNADEQSSGLEGTRKVNREFLLTNDDKGLKATEQHLKHVARVLSGESVETTVLNNRELSPHKNRLLSPLRCSAPMALHNSLVKPQRRSKCFESGNLQSSASQNVLRSLDVRNITDSSFSRTTRFRAVKVDSPGKRSDIISKVEARDITEMANKASKEPVGCVNNIGFLASLARSASRDSLQSTRGAGRLRTSGTGLSTKLQHFQEESLRKSSPQLEPSEFFLSTRGTGMNGNNTATGKRVGECTHHLPPVKAPIQTKKKTAKHCFLCGKKTGLATSYECRCGNNFCASHRYAETHSCTYDYKSAGRRYLQEANPVVNAPKLPKI", "length": 741, "header": "tr|F1SDV0-1|F1SDV0_PIG Isoform 1 of Zinc finger AN1-type containing 4 OS=Sus scrofa OX=9823 GN=ZFAND4 PE=4 SV=3 CANONICAL=F1SDV0-1" }, "locus": { "chromosome": "14", "start_pos": 90709669, "end_pos": 90653071, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011386.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011386.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011091.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011091.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SDV0", "url": "https://www.uniprot.org/uniprotkb/F1SDV0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152192", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152192", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B8A682-1", "protein_name": "AN1-type zinc finger protein 4", "gene_name": "zfand4", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTDKRNPPFFNDDNVGVLHYKLPFSETMELFIETLTGTCFQLRVSPFEQVVSVKAKIQRLEGIPVSQQHLIWNGMELEDEYCLHDYSITEGCTLKLVLAMRGGPVNTRRVTVTDDSVRDISDCLDAGREEMWEKSLPNKQVTFLVYREGDQLNFFRVVDRGDGTLTPVSESLSGASVRNVRAEEEEEQESASSELQTLENSITMGKMKLLKAKMENMNLNKKPKKTAKLKIRPPVGPRPCSGSHGSARHHRMFRVLPQIGHASSTHLPPIGDQQQPVLSTPTAGSAHQPYTSLSSPASSSRAHPSSAASGIYMLQAEEPWDNPVPRKIRLPPKVSRLDMRGPKVMRDCVYPPLSLLSSPGVQDEVDIKNEHLTLTEKTTVIESPKAVPFNLPEPLSLDVSAQRERSLNSLTMPEANAAAPLLSQAVNSNWRLPSQHDLTLTTEPFTPPRHFEFTGSSVHPSPSHALLRTSPSLPISSPSKTTFKVDKHSEVISKSEARDITNLANKATKEPLGSVSNAELLASLAGSGGQETLTSPYALGRLCATAAPLPNNIHLLQEDLLRRISPLQRTAGFTASSSSSGLSSSIKRLGTQTHHLPPVKVSSGVKKKSSKHCFLCGKKTGLATSYECRCGNIFCSIHRYSETHDCTYDYKSAGRRFLQETNPIVSAPKLPKI", "length": 673 }, "evidence": [ { "id": "F1SDV0", "url": "https://omabrowser.org/oma/group/F1SDV0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F7EY43-1", "protein_name": "Zinc finger AN1-type containing 4", "gene_name": "Zfand4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMAEQGTKLKHEQRYILPMFKADLGTIGIQLHTTYSRRIRKVKVMDNRKEPPFFNEDNVGPFYFKLPFYDPMELFIETLTGTCFELRVSPFEAVISVKGKIQRLEGIPICQQHLIWNNMELEDDYCLNDYNISEGCTLKLVLAMRGGPISTRKVPVEDPLRELAEYMDSSRDEVWEKTSCNKQVTFLVYREGDQLNFFRVVDRGDGTLTPLSESLSGGSVYNLYTDEDEETEPSPSGQQIIENSITMNKMKLLKAKMENMNLSKKPKKVVKVKPRPPIAPRPSSSSAAAARHRLLRVLPHIGQSCLPSGNAYVPETSRNAGTSSAAQAPADRPMPSLRSELLKDDGNWERNMLSHSTSSIRLLPQLTHLDLENDKELPDSVLHLGSSLPRRTKHLSGNLSSNNEEDVVLFPRSEECVADELLLPEVGPFAPFAEGNGAEQSSGVEGLGKVTPEFPLTKGDGGLRAAEQPLSHMARVLSSDPGDNAVLNHHREPGSHKNRLLSPLLCVAPVSLHNSLVKPQRQSKCFESGNPSASTSQNTLRELDIRTIADSPFSRTARFRGVKVDSPGKRSDVISKVEARDITEMANKASKEPVGCVNNNGFLASLARSASRDSLHSTRGVGRLRSSGIGLSTNFQHFQDENIRKSSPQSEPTDFFLSARGIGMNGSNAAAGKRIGESTHHLPPVKAPLQTKKKVTKHCFLCGKKTGLATSFECRQMWKQLLCISSLCRSSWLHL", "length": 735 }, "evidence": [ { "id": "F1SDV0", "url": "https://omabrowser.org/oma/group/F1SDV0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HVM4-1", "protein_name": "AN1-type zinc finger protein 4 isoform X4", "gene_name": "Zfand4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MRGGPISTRKVPVEDPLRELAEYMDSSRDEVWEKTSCNKQVTFLVYREGDQLNFFRVVDRGDGTLTPLSESLSGGSVYNLYTDEDEEAEPSPSGQQIIENSITMNKMKLLKAKMENMNLSKKPKKVVKVKPRPPVAPRPPSSSTAAARHRLLRVLPHIGQSCLPSPGNAYLPETSRNAGTSSSAAQGPVDRPVSSLRNELLKEDDKWEMNALSHPPGSIRLLPQMAHIELENDKELADSVLHLGSSLPRRTKLLSGNLPSSNEDDVVLFPPSEECVSEELLLPEVGPFAPFAEGNGVEQSSGVEGIGKVTPEFPLTKGDRGLRAAEQPLNHVARVLSSDPIDNAILNHRESSSHKNRLLSPLLCAAPVSLHNSLVKPQRQSKCFESGNPSASTSQNALRELDIRTIADSSFSRTARFRGVKVDSPGKRSDIISKVEARDITEMANKASKEPVGCVNNNGFLASLARSASRDSLQNTRGAGRLRPSGIGLSTNFQHFQDENIRKSSPQSEPTEFFLSARGIGVSGNNAAAGKRVGESTRHLPPVKAPLQAKKKITKHCFLCGKKTGLASSFECRCGNNFCASHRYAETHGCTYDYKGAGRRYLQEANPVVNAPKLPKI", "length": 617 }, "evidence": [ { "id": "F1SDV0", "url": "https://omabrowser.org/oma/group/F1SDV0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q86XD8-1", "protein_name": "AN1-type zinc finger protein 4", "gene_name": "ZFAND4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDNRKEPPFFNDDNMGPFYYRLHFCDTMELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGGPINTRRVPTDDPLRKMAEYLDSSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHVLRRKGEHRMSGGSMYNSDTDEDEETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPPEISRNGISSLATQLSAERYISSITGEFLKEDNSWENNTLSHFSSNVKLPPQIPHLELGNDQELADSVLHLGSSLPRQTKHFLGNLPSSNGNIVLPSEECVTEQSLLPKVGSLASFAEGNADEQSSGLEGACKVNLELLLTNADKGLKAPEQHLKHVAGVLNGESVETSVLNYRELSPHKNRLLSPLRCSAPMSLHNSLVKPERQSKCFEFGKLQPSSSQSLDVQNITDSSFSRTTCFQGVKVDSLGKRSDVISKVEARDITEMTNKASKEPVGCVNNISFLASLAGSTSRNRLQSTRGAGRLQNSGTGLSTNLQHFQEENFRKSSPQLEHTGVFLSTHGVGMNGNNAAAGKSVGECTTHHLPPVKAPLQTKKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI", "length": 727 }, "evidence": [ { "id": "F1SDV0", "url": "https://omabrowser.org/oma/group/F1SDV0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SDV0", "url": "https://www.uniprot.org/uniprotkb/F1SDV0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 113, "end_pos": 115, "annotation": "n_glycosylation_sequon" }, { "start_pos": 243, "end_pos": 245, "annotation": "n_glycosylation_sequon" }, { "start_pos": 529, "end_pos": 531, "annotation": "n_glycosylation_sequon" }, { "start_pos": 649, "end_pos": 651, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SDV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDV0" }, { "id": "PS51039", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51039" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AN1-type", "eco_id": "ECO_0000259", "start_pos": 675, "end_pos": 722, "start_aa": "Lys", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SDV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDV0" }, { "id": "PS50053", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50053" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like", "eco_id": "ECO_0000259", "start_pos": 54, "end_pos": 129, "start_aa": "Met", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 113, "end_pos": 115 }, { "start_pos": 243, "end_pos": 245 }, { "start_pos": 529, "end_pos": 531 }, { "start_pos": 649, "end_pos": 651 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SDV5-1", "uniprot_ac": "F1SDV5", "uniprot_id": "F1SDV5_PIG", "mass": { "chemical_mass": 82329.0, "monoisotopic_mass": 82329.0 }, "refseq": { "ac": "XP_005673002", "name": "EMILIN-3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673002" }, "gene_names": [ { "name": "EMILIN3", "type": "recommended", "evidence": [ { "id": "F1SDV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SDV5" } ] }, { "name": "EMILIN3", "type": "synonym", "evidence": [ { "id": "XP_005673002", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673002" } ] } ], "protein_names": [ { 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF14225", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14228", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14228", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19421", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19421", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZP30", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP30", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZP30-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZP30-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAX3", "url": "https://www.uniprot.org/uniprotkb/A0A287BAX3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BAX3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BAX3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SE88", "url": "https://www.uniprot.org/uniprotkb/F1SE88", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SE88-1", "url": "https://www.uniprot.org/uniprotkb/F1SE88-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SE95", "url": "https://www.uniprot.org/uniprotkb/F1SE95", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SE95-1", "url": "https://www.uniprot.org/uniprotkb/F1SE95-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI22", "url": "https://www.uniprot.org/uniprotkb/I3LI22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LI22-1", "url": "https://www.uniprot.org/uniprotkb/I3LI22-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSITIDPDVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKPLSRSLQRGEDLQFDQLISSMSSVAEHCLPSLLRTLFDWYRRQNGTEDESYEYRPRSSTKSKGDEQQRERDYLLERRDLAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGTNTGNVHIIADLYAEVIGVLAQSKFQAVRKKFVTELKELRQKEQSPHVVQSVISLIMGMKFFRVKMYPVEDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAAVKNEVNVPCLKNFVEMLYQTTFELSSRKKHSLALYPLITCLLCVSQKQFFLNNWHIFLQNCLSHLKNKDPKMSRVALESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSRSVVPRDTPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVGKSAKTFTINPERMNIGLRVFLVIADSLQQKDGEPPMPTTGVSLPSGNTLRVKKIFLNKTLTDEEAKVIGMSVYYPQVRKALDSILRHLDKEVGRPMCMTSVQMSNKEPEDMITGERKPKIDLFRTCIAAIPRLIPDGMSRTDLIELLARLTIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVTDVHPTLLDNAVKMLVQLINQWKQATQMHNKTQDSQHGVVNGASHPPPLERSPYSSVFHVVEGFALVTLCSSRPATRRLAVSVLREIRALFALLEIPKGDDELAIDVMDRLSPSILESFIHLTGADQTTLLYCPSSIDLLTLAEWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCPTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDSYIGLWRNYLLLCCSAATSSSSSASAGSVRCSPPETLASTPDSGYSIDSKIIGVPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSKRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGALSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLKPLPTARRHEEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYKIPSVTSGTTSSSNTMVAPMDGNSDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYLPETSSPGLPLHRCNIAMILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGSNSNIRTVASVLLRNKEFNEPRVLTVKQIAHLDYTFTAGVSDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQTSYHDPLMGNKYAANRKSTGQLNLSTSPITSSGYLGYNSNTRSNSLRLSLIGDRRGDRRRSNTLDIMDGRINHSSSLARTRSLSSLREKAMYDVQSTTEPASLMATIFWIAASLLESDYEYEYLLALRLLNKLLIHLPLDKSESREKIENVQSKLKWNNFPGLQQLFLKGFTSVSTQEMTVHLLSKLIAVSKHTLVDPSQLSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCANWINVVCRYLHDSFSDATFSLVTYLAELLEKGLSGMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKTYGGDIGSPEISFTKIFNNVSKELPGKTLDFHFDISETPIIGNKYGDQHSAAGRNGKPKVIAVTRSTSSTSSGSNSNALVPVSWKRPQLSQRRTREKLMNVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISATEDIIHEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPSLNLTNQEDTDESSEEEAALTASQILSRTQMLNNDSAADDTLPEHPDLLLQAQESTGSISTEEVLQIRDETPSLEASLDNANSQLPEDTSSVLKEEQVLTAFEEEGSYIIQEQQDSLVCQGILDLEETDTPEPPAPESYPGSVCEEDVTLALKELDERCEEEEADFSGLSSQDEEEQDGFPEVQTSPLPSPFLSAIIAAFQPVAYDDEEEAWRCHVNQMLSDTDGSCAVFTFHVFSRLFQSIQRKFGDLTNEAVSFLGESLQRIGTKFKSSLEVMMMCSECPTVFVDAETLMSCDLLETLKFSVLELQEHLDTYNAKREAAEQWLDNCKRTFGAKEDMYRINTDAQVSFLFFELELCRRLYKLHFQLLLLFQAYCKLINQVNTIKNEAEVFNMSEELAQLESILKEAESASENEEIDISKAAQTTIETAIHSLIETLKNKEFVSAVAQVKAFRSLWPNDIFGSCEDDPVQTLLHIYFHHQTLGQTGSFAVIGSDLDMSEANYKLMELNLEIRESLRMVQSYQLLAQGKPIGSLVSTGF", "length": 3015, "header": "tr|F1SE95-1|F1SE95_PIG Isoform 1 of FRY like transcription coactivator OS=Sus scrofa OX=9823 GN=FRYL PE=1 SV=4 CANONICAL=F1SE95-1" }, "isoforms": [ { "isoform_ac": "A0A286ZP30-1", "url": "https://www.uniprot.org/uniprotkb/F1SE95/entry#A0A286ZP30-1", "sequence": { "sequence": "MSSITIDPDVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKPLSRSLQRGEDLQFDQLISSMSSVAEHCLPSLLRTLFDWYRRQNGTEDESYEYRPRSSTKSKGDEQQRERDYLLERRDLAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGTNTGNVHIIADLYAEVIGVLAQSKFQAVRKKFVTELKELRQKEQSPHVVQSVISLIMGMKFFRVKMYPVEDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAAVKNEVNVPCLKNFVEMLYQTTFELSSRKKHSLALYPLITCLLCVSQKQFFLNNWHIFLQNCLSHLKMPSNNSIRKQIETLQNKDPKMSRVALESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSRSVVPRDTPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVGKSAKTFTINPERMNIGLRVFLVIADSLQQKDGEPPMPTTGVSLPSGNTLRVKKIFLNKTLTDEEAKVIGMSVYYPQVRKALDSILRHLDKEVGRPMCMTSVQMSNKEPEDMITGERKPKIDLFRTCIAAIPRLIPDGMSRTDLIELLARLTIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVTDVHPTLLDNAVKMLVQLINQWKQATQMHNKTQDSQHGVVNGASHPPPLERSPYSSVFHVVEGFALVTLCSSRPATRRLAVSVLREIRALFALLEIPKGDDELAIDVMDRLSPSILESFIHLTGADQTTLLYCPSSIDLLTLAEWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCPTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDSYIGLWRNYLLLCCSAATSSSSSASAGSVRCSPPETLASTPDSGYSIDSKIIGVPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSKRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGALSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLKPLPTARRHEEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYKIPSVTSGTTSSSNTMVAPMDGNSDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYLPETSSPGLPLHRCNIAMILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGSNSNIRTVASVLLRNKEFNEPRVLTVKQIAHLDYTFTAGVSDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQTSYHDPLMGNKYAANRKSTGQLNLSTSPITSSGYLGYNSNTRSNSLRLSLIGDRRGDRRRSNTLDIMDGRINHSSSLARTRSLSSLREKAMYDVQSTTEPASLMATIFWIAASLLESDYEYEYLLALRLLNKLLIHLPLDKSESREKIENVQSKLKWNNFPGLQQLFLKGFTSVSTQEMTVHLLSKLIAVSKHTLVDPSQLSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCANWINVVCRYLHDSFSDATFSLVTYLAELLEKGLSGMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKTYGGDIGSPEISFTKIFNNVSKELPGKTLDFHFDISETPIIGNKYGDQHSAAGRNGKPKVIAVTRSTSSTSSGSNSNALVPVSWKRPQLSQRRTREKLMNVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISATEDIIHEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPSLNLTNQEDTDESSEEEAALTASQILSRTQMDTSSVLKEEQVLTAFEEEGSYIIQEQQDSLVCQGILDLEETDTPEPPAPESYPGSVCEEDVTLALKELDERCEEEEADFSGLSSQDEEEQDGFPEVQTSPLPSPFLSAIIAAFQPVAYDDEEEAWRCHVNQMLSDTDGSCAVFTFHVFSRLFQSIQRKFGDLTNEAVSFLGESLQRIGTKFKSSLEVMMMCSECPTVFVDAETLMSCDLLETLKFSVLELQEHLDTYNAKREAAEQWLDNCKRTFGAKEDMYRINTDAQVSFLFFELELCRRLYKLHFQLLLLFQAYCKLINQVNTIKNEAEVFNMSEELAQLESILKEAESASENEEIDISKAAQTTIETAIHSLIETLKNKEFVSAVAQVKAFRSLWPNDIFGSCEDDPVQTLLHIYFHHQTLGQTGSFAVIGSDLDMSEANYKLMELNLEIRESLRMVQSYQLLAQGKPIGSLVSTGF", "length": 2974, "header": "tr|A0A286ZP30-1|A0A286ZP30_PIG Computationally mapped isoform of FRY like transcription coactivator OS=Sus scrofa OX=9823 GN=FRYL PE=1 SV=2 CANONICAL=F1SE95-1" }, "locus": { "chromosome": "8", "start_pos": 38559677, "end_pos": 38397690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037122.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037122.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033238.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033238.2" } ] } }, { "isoform_ac": "A0A287BAX3-1", "url": "https://www.uniprot.org/uniprotkb/F1SE95/entry#A0A287BAX3-1", "sequence": { "sequence": "MSSITIDPDVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKPLSRSLQRGEDLQFDQLISSMSSVAEHCLPSLLRTLFDWYRRQNGTEDESYEYRPRSSTKSKGDEQQRERDYLLERRDLAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGTNTGNVHIIADLYAEVIGVLAQSKFQAVRKKFVTELKELRQKEQSPHVVQSVISLIMGMKFFRVKMYPVEDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAAVKNEVNVPCLKNFVEMLYQTTFELSSRKKHSLALYPLITCLLCVSQKQFFLNNWHIFLQNCLSHLKMPSNNSIRKQIETLQNKDPKMSRVALESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSRSVVPRDTPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVGKSAKTFTINPERMNIGLRVFLVIADSLQQKDGEPPMPTTGVSLPSGNTLRVKKIFLNKTLTDEEAKVIGMSVYYPQVRKALDSILRHLDKEVGRPMCMTSVQMSNKEPEDMITGERKPKIDLFRTCIAAIPRLIPDGMSRTDLIELLARLTIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVTDVHPTLLDNAVKMLVQLINQWKQATQMHNKTQDSQHGVVNGASHPPPLERSPYSSVFHVVEGFALVTLCSSRPATRRLAVSVLREIRALFALLEIPKVRLAISFSYLTKTTLLYCPSSIDLLTLAEWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCPTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDSYIGLWRNYLLLCCSAATSSSSSASAGSVRCSPPETLASTPDSGYSIDSKIIGVPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSKRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGALSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLKPLPTARRHEEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYKIPSVTSGTTSSSNTMVAPMDGNSDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYLPETSSPGLPLHRCNIAMILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGSNSNIRTVASVLLRNKEFNEPRVLTVKQIAHLDYTFTAGVSDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQTSYHDPLMGNKYAANRKSTGQLNLSTSPITSSGYLGYNSNTRSNSLRLSLIGDRRGDRRRSNTLDIMDGRINHSSSLARTRSLSSLREKAMYDVQSTTEPASLMATIFWIAASLLESDYEYEYLLALRLLNKLLIHLPLDKSESREKIENVQSKLKWNNFPGLQQLFLKGFTSVSTQEMTVHLLSKLIAVSKHTLVDPSQLSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCANWINVVCRYLHDSFSDATFSLVTYLAELLEKGLSGMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKTYGGDIGSPEISFTKIFNNVSKELPGKTLDFHFDISETPIIGNKYGDQHSAAGRNGKPKVIAVTRSTSSTSSGSNSNALVPVSWKRPQLSQRRTREKLMNVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISATEDIIHEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPSLNLTNQEDTDESSEEEAALTASQILSRTQMLNNDSAADDTLPEHPDLLLQAQESTGSISTEEVLQIRDETPSLEASLDNANSQLPEDTSSVLKEEQVLTAFEEEGSYIIQEQQDSLVCQGILDLEETDTPEPPAPESYPGSVCEEDVTLALKELDERCEEEEADFSGLSSQDEEEQDGFPEVQTSPLPSPFLSAIIAAFQPVAYDDEEEAWRCHVNQMLSDTDGSCAVFTFHVFSRLFQSIQRKFGDLTNEAVSFLGESLQRIGTKFKSSLEVMMMCSECPTVFVDAETLMSCDLLETLKFSVLELQEHLDTYNAKREAAEQWLDNCKRTFGAKEDMYRINTDAQQMEILAELELCRRLYKLHFQLLLLFQAYCKLINQVNTIKNEAEVFNMSEELAQLESILKEAESASENEEIDISKAAQTTIETAIHSLIETLKNKEFVSAVAQVKAFRSLWPNDIFGSCEDDPVQTLLHIYFHHQTLGQTGSFAVIGSDLDMSEANYKLMELNLEIRESLRMVQSYQLLAQGKPIGSLVSTGF", "length": 3013, "header": "tr|A0A287BAX3-1|A0A287BAX3_PIG Computationally mapped isoform of FRY like transcription coactivator OS=Sus scrofa OX=9823 GN=FRYL PE=1 SV=2 CANONICAL=F1SE95-1" }, "locus": { "chromosome": "8", "start_pos": 38559677, "end_pos": 38397690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064649.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064649.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053702.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053702.2" } ] } }, { "isoform_ac": "F1SE88-1", "url": "https://www.uniprot.org/uniprotkb/F1SE95/entry#F1SE88-1", "sequence": { "sequence": "MSSITIDPDVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKPLSRSLQRGEDLQFDQLISSMSSVAEHCLPSLLRTLFDWYRRQNGTEDESYEYRPRSSTKSKGDEQQRERDYLLERRDLAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGTNTGNVHIIADLYAEVIGVLAQSKFQAVRKKFVTELKELRQKEQSPHVVQSVISLIMGMKFFRVKMYPVEDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAALYPLITCLLCVSQKQFFLNNWHIFLQNCLSHLKNKDPKMSRVALESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSRSVVPRDTPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVGKSAKTFTINPERMNIGLRVFLVIADSLQQKDGEPPMPTTGVSLPSGNTLRVKKIFLNKTLTDEEAKVIGMSVYYPQVRKALDSILRHLDKEVGRPMCMTSVQMSNKEPEDMITGERKPKIDLFRTCIAAIPRLIPDGMSRTDLIELLARLTIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVTDVHPTLLDNAVKMLVQLINQWKQATQMHNKTQDSQHGVVNGASHPPPLERSPYSSVFHVVEGFALVTLCSSRPATRRLAVSVLREIRALFALLEIPKGDDELAIDVMDRLSPSILESFIHLTGADQTTLLYCPSSIDLLTLAEWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCPTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDSYIGLWRNYLLLCCSAATSSSSSASAGSVRCSPPETLASTPDSGYSIDSKIIGVPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSKRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGALSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLKPLPTARRHEEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYKIPSVTSGTTSSSNTMVAPMDGNSDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYLPETSSPGLPLHRCNIAMILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGSNSNIRTVASVLLRNKEFNEPRVLTVKQIAHLDYTFTAGVSDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQTSYHDPLMGNKYAANRKSTGQLNLSTSPITSSGYLGYNSNTRSNSLRLSLIGDRRGDRRRSNTLDIMDGRINHSSSLARTRSLSSLREKAMYDVQSTTEPASLMATIFWIAASLLESDYEYEYLLALRLLNKLLIHLPLDKSESREKIENVQSKLKWNNFPGLQQLFLKGFTSVSTQEMTVHLLSKLIAVSKHTLVDPSQLSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCANWINVVCRYLHDSFSDATFSLVTYLAELLEKGLSGMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKTYGGDIGSPEISFTKIFNNVSKELPGKTLDFHFDISETPIIGNKYGDQHSAAGRNGKPKVIAVTRSTSSTSSGSNSNALVPVSWKRPQLSQRRTREKLMNVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISATEDIIHEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPSLNLTNQEDTDESSEEEAALTASQILSRTQMLNNDSAADDTLPEHPDLLLQAQESTGSISTEEVLQIRDETPSLEASLDNANSQLPEDTSSVLKEEQVLTAFEEEGSYIIQEQQDSLVCQGILDLEETDTPEPPAPESYPGSVCEEDVTLALKELDERCEEEEADFSGLSSQDEEEQDGFPEVQTSPLPSPFLSAIIAAFQPVAYDDEEEAWRCHVNQMLSDTDGSCAVFTFHVFSRLFQSIQRKFGDLTNEAVSFLGESLQRIGTKFKSSLEVMMMCSECPTVFVDAETLMSCDLLETLKFSVLELQEHLDTYNAKREAAEQWLDNCKRTFGAKEDMYRINTDAQVSFLFFELELCRRLYKLHFQLLLLFQAYCKLINQVNTIKNEAEVFNMSEELAQLESILKEAESASENEEIDISKAAQTTIETAIHSLIETLKNKEFVSAVAQVKAFRSLWPNDIFGSCEDDPVQTLLHIYFHHQTLGQTGSFAVIGSDLDMSEANYKLMELNLEIRESLRMVQSYQLLAQGKPIGSLVSTGF", "length": 2982, "header": "tr|F1SE88-1|F1SE95_PIG Computationally mapped isoform of FRY like transcription coactivator OS=Sus scrofa OX=9823 GN=FRYL PE=1 SV=4 CANONICAL=F1SE95-1" }, "locus": { "chromosome": "8", "start_pos": 38559677, "end_pos": 38397690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009659.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009659.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009410.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009410.4" } ] } }, { "isoform_ac": "F1SE95-1", "url": "https://www.uniprot.org/uniprotkb/F1SE95/entry#F1SE95-1", "sequence": { "sequence": "MSSITIDPDVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKPLSRSLQRGEDLQFDQLISSMSSVAEHCLPSLLRTLFDWYRRQNGTEDESYEYRPRSSTKSKGDEQQRERDYLLERRDLAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGTNTGNVHIIADLYAEVIGVLAQSKFQAVRKKFVTELKELRQKEQSPHVVQSVISLIMGMKFFRVKMYPVEDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAAVKNEVNVPCLKNFVEMLYQTTFELSSRKKHSLALYPLITCLLCVSQKQFFLNNWHIFLQNCLSHLKNKDPKMSRVALESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSRSVVPRDTPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVGKSAKTFTINPERMNIGLRVFLVIADSLQQKDGEPPMPTTGVSLPSGNTLRVKKIFLNKTLTDEEAKVIGMSVYYPQVRKALDSILRHLDKEVGRPMCMTSVQMSNKEPEDMITGERKPKIDLFRTCIAAIPRLIPDGMSRTDLIELLARLTIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVTDVHPTLLDNAVKMLVQLINQWKQATQMHNKTQDSQHGVVNGASHPPPLERSPYSSVFHVVEGFALVTLCSSRPATRRLAVSVLREIRALFALLEIPKGDDELAIDVMDRLSPSILESFIHLTGADQTTLLYCPSSIDLLTLAEWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCPTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDSYIGLWRNYLLLCCSAATSSSSSASAGSVRCSPPETLASTPDSGYSIDSKIIGVPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSKRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGALSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLKPLPTARRHEEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYKIPSVTSGTTSSSNTMVAPMDGNSDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYLPETSSPGLPLHRCNIAMILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGSNSNIRTVASVLLRNKEFNEPRVLTVKQIAHLDYTFTAGVSDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQTSYHDPLMGNKYAANRKSTGQLNLSTSPITSSGYLGYNSNTRSNSLRLSLIGDRRGDRRRSNTLDIMDGRINHSSSLARTRSLSSLREKAMYDVQSTTEPASLMATIFWIAASLLESDYEYEYLLALRLLNKLLIHLPLDKSESREKIENVQSKLKWNNFPGLQQLFLKGFTSVSTQEMTVHLLSKLIAVSKHTLVDPSQLSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCANWINVVCRYLHDSFSDATFSLVTYLAELLEKGLSGMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKTYGGDIGSPEISFTKIFNNVSKELPGKTLDFHFDISETPIIGNKYGDQHSAAGRNGKPKVIAVTRSTSSTSSGSNSNALVPVSWKRPQLSQRRTREKLMNVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISATEDIIHEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPSLNLTNQEDTDESSEEEAALTASQILSRTQMLNNDSAADDTLPEHPDLLLQAQESTGSISTEEVLQIRDETPSLEASLDNANSQLPEDTSSVLKEEQVLTAFEEEGSYIIQEQQDSLVCQGILDLEETDTPEPPAPESYPGSVCEEDVTLALKELDERCEEEEADFSGLSSQDEEEQDGFPEVQTSPLPSPFLSAIIAAFQPVAYDDEEEAWRCHVNQMLSDTDGSCAVFTFHVFSRLFQSIQRKFGDLTNEAVSFLGESLQRIGTKFKSSLEVMMMCSECPTVFVDAETLMSCDLLETLKFSVLELQEHLDTYNAKREAAEQWLDNCKRTFGAKEDMYRINTDAQVSFLFFELELCRRLYKLHFQLLLLFQAYCKLINQVNTIKNEAEVFNMSEELAQLESILKEAESASENEEIDISKAAQTTIETAIHSLIETLKNKEFVSAVAQVKAFRSLWPNDIFGSCEDDPVQTLLHIYFHHQTLGQTGSFAVIGSDLDMSEANYKLMELNLEIRESLRMVQSYQLLAQGKPIGSLVSTGF", "length": 3015, "header": "tr|F1SE95-1|F1SE95_PIG Isoform 1 of FRY like transcription coactivator OS=Sus scrofa OX=9823 GN=FRYL PE=1 SV=4 CANONICAL=F1SE95-1" }, "locus": { "chromosome": "8", "start_pos": 38559677, "end_pos": 38397690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009658.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009658.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009409.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009409.4" } ] } }, { "isoform_ac": "I3LI22-1", "url": "https://www.uniprot.org/uniprotkb/F1SE95/entry#I3LI22-1", "sequence": { "sequence": "MSSITIDPDVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKPLSRSLQRGEDLQFDQLISSMSSVAEHCLPSLLRTLFDWYRRQNGTEDESYEYRPRSSTKSKGDEQQRERDYLLERRDLAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGTNTGNVHIIADLYAEVIGVLAQSKFQAVRKKFVTELKELRQKEQSPHVVQSVISLIMGMKFFRVKMYPVEDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAAVKNEVNVPCLKNFVEMLYQTTFELSSRKKHSLALYPLITCLLCVSQKQFFLNNWHIFLQNCLSHLKMPSNNSIRKQIETLQNKDPKMSRVALESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSRSVVPRDTPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVGKSAKTFTINPERMNIGLRVFLVIADSLQQKDGEPPMPTTGVSLPSGNTLRVKKIFLNKTLTDEEAKVIGMSVYYPQVRKALDSILRHLDKEVGRPMCMTSVQMSNKEPEDMITGERKPKIDLFRTCIAAIPRLIPDGMSRTDLIELLARLTIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVTDVHPTLLDNAVKMLVQLINQWKQATQMHNKTQDSQHGVVNGASHPPPLERSPYSSVFHVVEGFALVTLCSSRPATRRLAVSVLREIRALFALLEIPKGDDELAIDVMDRLSPSILESFIHLTGADQTTLLYCPSSIDLLTLAEWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCPTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDSYIGLWRNYLLLCCSAATSSSSSASAGSVRCSPPETLASTPDSGYSIDSKIIGVPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSKRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGALSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQVMLHYLLPWMNNIELVDLKPLPTARRHEEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSYKIPSVTSGTTSSSNTMVAPMDGNSDNKPIKENIEESYVHLDIYSGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYLPETSSPGLPLHRCNIAMILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGSNSNIRTVASVLLRNKEFNEPRVLTVKQIAHLDYTFTAGVSDFIPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTILNEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSAKNPSIKSAEQLTTFLKHVVSVFKQSSSEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQTSYHDPLMGNKYAANRKSTGQLNLSTSPITSSGYLGYNSNTRSNSLRLSLIGDRRGDRRRSNTLDIMDGRINHSSSLARTRSLSSLREKAMYDVQSTTEPASLMATIFWIAASLLESDYEYEYLLALRLLNKLLIHLPLDKSESREKIENVQSKLKWNNFPGLQQLFLKGFTSVSTQEMTVHLLSKLIAVSKHTLVDPSQLSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCANWINVVCRYLHDSFSDATFSLVTYLAELLEKGLSGMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKTYGGDIGSPEISFTKIFNNVSKELPGKTLDFHFDISETPIIGNKYGDQHSAAGRNGKPKVIAVTRSTSSTSSGSNSNALVPVSWKRPQLSQRRTREKLMNVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISATEDIIHEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAEGESMDNFNWGVRRRSLDSIDKGDTPSLQEYQCSSSTPSLNLTNQEDTDESSEEEAALTASQILSRTQMLNNDSAADDTLPEHPDLLLQAQESTGSISTEEVLQIRDETPSLEASLDNANSQLPEDTSSVLKEEQVLTAFEEEGSYIIQEQQDSLVCQGILDLEETDTPEPPAPESYPGSVCEEDVTLALKELDERCEEEEADFSGLSSQDEEEQDGFPEVQTSPLPSPFLSAIIAAFQPVAYDDEEEAWRCHVNQMLSDTDGSCAVFTFHVFSRLFQSIQRKFGDLTNEAVSFLGESLQRIGTKFKSSLEVMMMCSECPTVFVDAETLMSCDLLETLKFSVLELQEHLDTYNAKREAAEQWLDNCKRTFGAKEDMYRINTDAQVSFLFFELELCRRLYKLHFQLLLLFQAYCKLINQVNTIKNEAEVFNMSEELAQLESILKEAESASENEEIDISKAAQTTIETAIHSLIETLKNKEFVSAVAQVKAFRSLWPNDIFGSCEDDPVQTLLHIYFHHQTLGQTGSFAVIGSDLDMSEANYKLMELNLEIRESLRMVQSYQLLAQGKPIGSLVSTGF", "length": 3030, "header": "tr|I3LI22-1|I3LI22_PIG Computationally mapped isoform of FRY like transcription coactivator OS=Sus scrofa OX=9823 GN=FRYL PE=1 SV=3 CANONICAL=F1SE95-1" }, "locus": { "chromosome": "8", "start_pos": 38559677, "end_pos": 38397690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031947.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031947.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023721.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023721.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 2329, "start_aa": "Thr", "end_pos": 2329, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr2329", "evidence": [ { "id": 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[ "Protein Classification" ] }, { "id": "PF15301", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15301", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003356965", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356965", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZR71", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZR71-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZR71-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QXA0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXA0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QXA0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QXA0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEA2-1", "url": "https://www.uniprot.org/uniprotkb/F1SEA2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRTGGSTPSSGTASPRGFPLGLSAKSGSGAGTGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPEELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTTNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPSSQETVQLMQTTSSPGPPMVQNTVPANPSSNINSTTLTRPAGTTMMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY", "length": 582, "header": "tr|F1SEA2-1|F1SEA2_PIG Isoform 1 of SLAIN motif family member 2 OS=Sus scrofa OX=9823 GN=SLAIN2 PE=3 SV=2 CANONICAL=F1SEA2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZR71-1", "url": "https://www.uniprot.org/uniprotkb/F1SEA2/entry#A0A286ZR71-1", "sequence": { "sequence": "MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRTGGSTPSSGTASPRGFPLGLSAKSGSGAGTGPRRTSSEGGLLDEVEPLRPEELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTTNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPSSQETVQLMQTTSSPGPPMVQNTVPANPSSNINSTTLTRPAGTTMMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY", "length": 569, "header": "tr|A0A286ZR71-1|A0A286ZR71_PIG Computationally mapped isoform of SLAIN motif family member 2 OS=Sus scrofa OX=9823 GN=SLAIN2 PE=3 SV=2 CANONICAL=F1SEA2-1" }, "locus": { "chromosome": "8", "start_pos": 38317725, "end_pos": 38241860, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048245.2", "url": "https://www.ensembl.org/id/ENSSSCT00000048245.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033965.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033965.2" } ] } }, { "isoform_ac": "A0A5G2QXA0-1", "url": "https://www.uniprot.org/uniprotkb/F1SEA2/entry#A0A5G2QXA0-1", "sequence": { "sequence": "MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRTGGSTPSSGTASPRGFPLGLSAKSGSGAGTGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPEELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTTNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASATSQRLKNLPRTSLKAKQLLQTSSTKRVPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPSSQETVQLMQTTSSPGPPMVQNTVPANPSSNINSTTLTRPAGTTMMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY", "length": 608, "header": "tr|A0A5G2QXA0-1|A0A5G2QXA0_PIG Computationally mapped isoform of SLAIN motif family member 2 OS=Sus scrofa OX=9823 GN=SLAIN2 PE=3 SV=1 CANONICAL=F1SEA2-1" }, "locus": { "chromosome": "8", "start_pos": 38317725, "end_pos": 38241860, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075155.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075155.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068775.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068775.1" } ] } }, { "isoform_ac": "F1SEA2-1", "url": "https://www.uniprot.org/uniprotkb/F1SEA2/entry#F1SEA2-1", "sequence": { "sequence": "MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRTGGSTPSSGTASPRGFPLGLSAKSGSGAGTGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPEELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTTNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPSSQETVQLMQTTSSPGPPMVQNTVPANPSSNINSTTLTRPAGTTMMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY", "length": 582, "header": "tr|F1SEA2-1|F1SEA2_PIG Isoform 1 of SLAIN motif family member 2 OS=Sus scrofa OX=9823 GN=SLAIN2 PE=3 SV=2 CANONICAL=F1SEA2-1" }, "locus": { "chromosome": "8", "start_pos": 38317725, "end_pos": 38241860, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009651.4", "url": "https://www.ensembl.org/id/ENSSSCT00000009651.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009402.2", "url": "https://www.ensembl.org/id/ENSSSCP00000009402.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519161", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519161", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AIE0-1", "protein_name": "SLAIN motif family, member 2", "gene_name": "Slain2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQSAGLLGPGSPARAGVSTPSSGAASPRGFPLGLGAKASGGAGSGPRRTSSEDLRDATSLLAAGEGGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYSSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNFKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDSMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRASPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSGSQETTQFTQTTSSPGPPVVQNTAPANPSSNINSATLTRPAGTAAMRSGLPRPSAPSAGGIPVPRSKLVQPVRRSLPAPKTYGSMKDDSWKDGCY", "length": 581 }, "evidence": [ { "id": "F1SEA2", "url": "https://omabrowser.org/oma/group/F1SEA2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M3AW67-1", "protein_name": "SLAIN motif-containing protein 2 isoform X1", "gene_name": "slain2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDINSNINADLEVRKLQDLVKKLEQQNEQLRSRSSLLSSSSPGGNTRPVSAGFDSPGAAAALAGFTGVGFGGSRGFDEALKNSRLSPRRSYHGSNYGDYDSDSGSFTTSNTSFASYYNDSLDYIEDGETSVLDEVEVLDLEDMDCLYEEEDSWLYEAKLNSPLQKTLSPIVWCRQALDNPSPDMESAKRSLLHRLDLTMSGNKRRSLYNSSYSPQVGYGSPYSTNTANSPYSSGFNSPSSTPSRVPIVKQLVLPGSTGHQRGSNDRNAQAVSPQSSVDSELSTSEMDEDSVGSSTTYKLNDVTDVQILARMQEESLRQEYAATASRRSSGSSCQSLRRGTLSDQELDAQSLEDDEEAVHHSYHTPVNRFSPSPRHSPRVSPRNSPRSRSPARSLEYSRGSPQNIISRLQQPRHSLQGHDTQTNAIKNEEKLRRSLPNLTRSSSGSTAEQVKNSRSCESNLQVPNGGSPRHQSQSAKSDHRLSAPVRLSPKPKERLQSPTSLRVPLSCCFGEEADFMPSSSKLRTPAAPSPLALRQPMKVVSNHGSGTTTPTRSMAPTRSGLPRPSTNAGGGLPVPRSKLVQPVRRSLPAPRTYSGIRDESWREGCY", "length": 607 }, "evidence": [ { "id": "F1SEA2", "url": "https://omabrowser.org/oma/group/F1SEA2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3MHV6-1", "protein_name": "SLAIN motif-containing protein 2", "gene_name": "SLAIN2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEDVNSDVNADQEVRKLQELVKMLEKQNEQLRSRSGAVQGAGSFGPGSPVRAGASTPSSGTASPRGFPLGLSAKSGSGAGSGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPEELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSVSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATASRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTTNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQETTQLMQTTSSPGPPMVQNTVPANPPSNINSTTLTRPAGTTVMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY", "length": 582 }, "evidence": [ { "id": "F1SEA2", "url": "https://omabrowser.org/oma/group/F1SEA2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8CI08-1", "protein_name": "SLAIN motif-containing protein 2", "gene_name": "Slain2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGLLGPGSPARVGVSTPSSGAASPRGFPLGLGAKASGGAGSGPRRTSSEDLRDATSLLAAGEGGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSVSYSNSYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNFKSSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAASTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDSLQHAVHPALNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRASPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSSTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSGSQETTQFTQTTSSPGPPVVQNSAPANPSSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLVQPVRRSLPAPKSYGSMKDDSWKDGCY", "length": 581 }, "evidence": [ { "id": "F1SEA2", "url": "https://omabrowser.org/oma/group/F1SEA2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P270-1", "protein_name": "SLAIN motif-containing protein 2", "gene_name": "SLAIN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRAGASIPSSGAASPRGFPLGLSAKSGGGPGSGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY", "length": 581 }, "evidence": [ { "id": "F1SEA2", "url": "https://omabrowser.org/oma/group/F1SEA2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "microtubule nucleation", "id": "GO:0007020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007020", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" }, { "name": "positive regulation of microtubule polymerization", "id": "GO:0031116", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031116", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" }, { "name": "cytoplasmic microtubule organization", "id": "GO:0031122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031122", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" }, { "name": "microtubule plus-end", "id": "GO:0035371", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035371", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" }, { "name": "ciliary tip", "id": "GO:0097542", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097542", "evidence": [ { "database": "UniProtKB", "id": "F1SEA2", "url": "https://www.uniprot.org/uniprotkb/F1SEA2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 203, "end_pos": 205, "annotation": "n_glycosylation_sequon" }, { "start_pos": 308, "end_pos": 310, "annotation": "n_glycosylation_sequon" }, { "start_pos": 417, "end_pos": 419, "annotation": "n_glycosylation_sequon" }, { "start_pos": 520, "end_pos": 522, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 203, "end_pos": 205 }, { "start_pos": 308, "end_pos": 310 }, { "start_pos": 417, "end_pos": 419 }, { "start_pos": 520, "end_pos": 522 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { 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"authors" ] } ] }, { "uniprot_canonical_ac": "F1SEB1-1", "uniprot_ac": "F1SEB1", "uniprot_id": "F1SEB1_PIG", "mass": { "chemical_mass": 54907.0, "monoisotopic_mass": 54907.0 }, "refseq": { "ac": "XP_020919707", "name": "ubiquitin-associated protein 1 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919707" }, "gene_names": [ { "name": "UBAP1", "type": "recommended", "evidence": [ { "id": "F1SEB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" } ] }, { "name": "UBAP1", "type": "synonym", "evidence": [ { "id": "XP_020919707", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919707" } ] } ], "protein_names": [ { "name": "Ubiquitin-associated protein 1", "type": "recommended", "evidence": [ { "id": "F1SEB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEB1/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin-associated protein 1 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020919707", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919707" } ] } ], "function": [ { "annotation": "Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Binds to ubiquitinated cargo proteins and is required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs). Plays a role in the proteasomal degradation of ubiquitinated cell-surface proteins, such as EGFR and BST2.", "evidence": [ { "database": "UniProtKB", "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1#function" }, { "database": "UniProtKB", "id": "ARBA00056151", "url": "https://www.uniprot.org/uniprotkb/ARBA00056151#function" }, { "database": "UniProtKB", "id": "F1SEA8", "url": "https://www.uniprot.org/uniprotkb/F1SEA8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UBAP1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1", "locus": { "chromosome": "10", "start_pos": 32552245, "end_pos": 32626083, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021761", "url": "https://www.ensembl.org/id/ENSSSCG00000021761" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021761", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021761", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd14315", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14315", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14316", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14316", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100739464", "url": "https://www.ncbi.nlm.nih.gov/gene/100739464", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015940", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015940", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023340", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023340", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038870", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038870", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049467", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049467", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ENWKPWP", "url": "https://omabrowser.org/oma/group/ENWKPWP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR15960", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15960", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15960:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15960:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21267", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21267", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22567", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22567", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-917729", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-917729", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020919707", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919707", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2RA92", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RA92-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RA92-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEA8", "url": "https://www.uniprot.org/uniprotkb/F1SEA8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEA8-1", "url": "https://www.uniprot.org/uniprotkb/F1SEA8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEB1-1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASKKLGADFHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKKTIEWAEDIKKIQEAQWEAERKAEEAEAKVNSKSGPEGDSKLSFSKTPGAAIMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFVTLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSSQKTAKMASTFHSTSCLRSGTLRNSLKPSTQSSASELNGHHTLGLSALNLDSGTEVPTPAPSQMPSLSVLSMCTEESSPPNTGPMITPPNLSMSQVPNTPGCPQAYSELQTLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS", "length": 502, "header": "tr|F1SEB1-1|F1SEB1_PIG Isoform 1 of Ubiquitin-associated protein 1 OS=Sus scrofa OX=9823 GN=UBAP1 PE=4 SV=3 CANONICAL=F1SEB1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RA92-1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1/entry#A0A5G2RA92-1", "sequence": { "sequence": "MASKKLGADFHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKKTIEWAEDIKKIQEAQWEAERKAEEAEAKVNSKSGPEGDSKLSFSKTPGAAIMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFVTLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSSQKTAKMASTFHSTSCLRSGTLRNSLKPSTQSSASELNGHHTLGLSALNLDSGTEVPTPAPSQMPSLSVLSMCTEESSPPNTGPMILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS", "length": 441, "header": "tr|A0A5G2RA92-1|A0A5G2RA92_PIG Computationally mapped isoform of Ubiquitin associated protein 1 OS=Sus scrofa OX=9823 GN=UBAP1 PE=4 SV=1 CANONICAL=F1SEB1-1" }, "locus": { "chromosome": "10", "start_pos": 32588648, "end_pos": 32553236, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069627.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069627.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073951.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073951.1" } ] } }, { "isoform_ac": "F1SEA8-1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1/entry#F1SEA8-1", "sequence": { "sequence": "RGGAVRGRRREAGLQHGGCGTGGGYGDGLAWGGQSWRWWRSLSLGAVRSSAGTEPGRPVGGSTFRLLGRQRRRRSGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKKTIEWAEDIKKIQEAQWEAERKAEEAEAKVNSKSGPEGDSKLSFSKTPGAAIMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFVTLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSSQKTAKMASTFHSTSCLRSGTLRNSLKPSTQSSASELNGHHTLGLSALNLDSGTEVPTPAPSQMPSLSVLSMCTEESSPPNTGPMITPPNLSMSQVPNTPGCPQAYSELQTLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS", "length": 566, "header": "tr|F1SEA8-1|F1SEB1_PIG Computationally mapped isoform of Ubiquitin-associated protein 1 OS=Sus scrofa OX=9823 GN=UBAP1 PE=4 SV=4 CANONICAL=F1SEB1-1" }, "locus": { "chromosome": "10", "start_pos": 32626067, "end_pos": 32553236, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012024.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012024.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011716.4", "url": "https://www.ensembl.org/id/ENSSSCP00000011716.4" } ] } }, { "isoform_ac": "F1SEB1-1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1/entry#F1SEB1-1", "sequence": { "sequence": "MASKKLGADFHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKKTIEWAEDIKKIQEAQWEAERKAEEAEAKVNSKSGPEGDSKLSFSKTPGAAIMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFVTLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSSQKTAKMASTFHSTSCLRSGTLRNSLKPSTQSSASELNGHHTLGLSALNLDSGTEVPTPAPSQMPSLSVLSMCTEESSPPNTGPMITPPNLSMSQVPNTPGCPQAYSELQTLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS", "length": 502, "header": "tr|F1SEB1-1|F1SEB1_PIG Isoform 1 of Ubiquitin-associated protein 1 OS=Sus scrofa OX=9823 GN=UBAP1 PE=4 SV=3 CANONICAL=F1SEB1-1" }, "locus": { "chromosome": "10", "start_pos": 32588648, "end_pos": 32553236, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012021.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012021.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011713.4", "url": "https://www.ensembl.org/id/ENSSSCP00000011713.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 334, "start_aa": "Thr", "end_pos": 334, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr334", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEA8", "url": "https://www.uniprot.org/uniprotkb/F1SEA8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-917729", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-917729", "resource": "Reactome", "description": "Endosomal Sorting Complex Required For Transport (ESCRT)" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YET8-1", "protein_name": "Ubiquitin-associated protein 1", "gene_name": "UBAP1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVRFLIKLLLILGPFSYLDDVPFKIGDKFKTPAKVGLPIGFCMPDSFQLVREAQYDFSLEKKTIEWAEDIKKIQAAQKEAERKAEEAIANSKVAPEDNNRMGFSEGPCPEAMPPPINPILASLQHNSILTPTPANSSAVKQKVLSPPHPKADFNPADFECEEDPFDKLELKTIDDKEELKNILEIHVGTTGPVVAQLLDNSLPKGRSESVLQDQEVLASIERAALDLKPLHKPNGFITLPQLGNCEKMSLSSKVSLSPITSVSNIKSLSFPKLDSDESDQKSSKLMSTFHSTSCLRNGTFLSSLQACAQNKASELNGHHMVDLSAVNEDSGMEMSTLSSSSRLQSLALSTLCTEEQSTVTTVHPDKETEVPVVTHQNFPVSKVPNNTTCTKQSGFPELQQALSASERQCVETVVNMGYSPENVLKAMKKKGQNIDQVLDYLFAHGQLCEKGFDPLLVEAALEMHQCSEEKITELLQLMSQFKEMGFELKDIKEVLLLHNNDQQNALEDLMARAEAS", "length": 516 }, "evidence": [ { "id": "F1SEB1", "url": "https://omabrowser.org/oma/group/F1SEB1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F6P6X0-1", "protein_name": "Ubiquitin-associated protein 1", "gene_name": "ubap1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAARKSGSDIHNNGPVSYLDDVPFKLNEKFRCPSKVGLPIGFCLSDCNAILSDLQYDFNLERRTVQWGEELAKARAAEARAAEAIRTDSESERQAASQDAEVGLVGGKKARPSDEQDIVPPALKPVLAGLSHNAILTPLPAPSFGQTRPAPSNPAPQYLNLADFEREEDPFDKLELKTLDDKEELRTILQSQPQSSVSPPQLPPAEHRPVSPSTTPPLQAKTGIFHKPNGLVGLLDLDRGGVLGGQIDADRPCNIRSLTFPKLSDPGDSPLETPLSVYPVAPPRNLSNGTPPSLQRTASNNNTTLPQEQPVFAQNGTPKQSNPVTVTSHPPAGTTLLSLSPSERQCVETIVGMGYSYEGVLKAMQRQGQNVEQVLEYLFTHSRLCDRGFDATAVEECLEMYQGSEEKALEFLQLMSRFGEMGFERDTIKEVLLVHNNDQDKALEDLMTRATAS", "length": 453 }, "evidence": [ { "id": "F1SEB1", "url": "https://omabrowser.org/oma/group/F1SEB1/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "G3I852-1", "protein_name": "Ubiquitin-associated protein 1", "gene_name": "Ubap1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASKKLGSDFHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSMPDCLQVIREVQYDFSLEKKTIEWAEDVKLIQEAQREAERKAEDAEAKVNSKSGPEGDSKMSFSKTHNTATMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNSPRGSPGSVLQDEEVLASLEQATLDFKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPTVSNIKSLSFPKLDSDDSNQKTVKLASTFHSTSCLRSGTSRNFLKPSTQSSASELNGDHALGLSALNLNSGTEVPTMTSSQMPSLSVLSVCTEESSPPNTCPTVTPLNFSVSQVPSCPQAYLELQALSPSERQCVETVVNMGYSYDCVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS", "length": 499 }, "evidence": [ { "id": "F1SEB1", "url": "https://omabrowser.org/oma/group/F1SEB1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5XIS7-1", "protein_name": "Ubiquitin-associated protein 1", "gene_name": "Ubap1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKKLGTDFHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREMQYDFSLEKKAIEWAEDIRLIQEAQQEAERKSEEAEAKVNSKSGPEGDSKVSFSKTHSPATMPPPINPILASLQHNNILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNTPRGNSGSVLQDEEVLASLEQATLDFKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPTVSNIKSLSFPKLDSDDSSQKTVRLASTFHSTSCLRSGASRNFLKPSTQSSASELNGDHALGLSALNLNSGTEVPALTSSQMPSLSILSVCTEESSPPSTCPTVTPLNFSVSQVPTMPSCPQAYLELQALSPSERQCVETVVNMGYSYDCVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAEAS", "length": 502 }, "evidence": [ { "id": "F1SEB1", "url": "https://omabrowser.org/oma/group/F1SEB1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BH48-1", "protein_name": "Ubiquitin-associated protein 1", "gene_name": "Ubap1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKKLGTDVHGTFSYLDDVPFKIGDKFKTPAKVGLPIGFSLPDCLQVVREMQYDFSLEKKTIEWAEDIKLIQEAQREAERKAEEAEAKVNSKSGPEGDSKVSFPKTHNTATMPPPINPILASLQHNNILTPTRVSSSATKQKVLSPPHTKADFNPADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDSNTARGSSGAVLQDEEVLASLEQATLDFKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPTVSNIKSLSFPKLDSDDSNQKTVKLASTFHSTSCLRSGASRSLLKPSTQSSASELNGDHTLGLSALNLNSGTEVPTLTSSQMPSLSSVSVCTEESSPPDPCPTVTPLNFSVSQVPNMPSCPQAYLELQALSPSERQCVETVVNMGYSYDCVLRAMRKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS", "length": 502 }, "evidence": [ { "id": "F1SEB1", "url": "https://omabrowser.org/oma/group/F1SEB1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NZ09-1", "protein_name": "Ubiquitin-associated protein 1", "gene_name": "UBAP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASKKLGADFHGTFSYLDDVPFKTGDKFKTPAKVGLPIGFSLPDCLQVVREVQYDFSLEKKTIEWAEEIKKIEEAEREAECKIAEAEAKVNSKSGPEGDSKMSFSKTHSTATMPPPINPILASLQHNSILTPTRVSSSATKQKVLSPPHIKADFNLADFECEEDPFDNLELKTIDEKEELRNILVGTTGPIMAQLLDNNLPRGGSGSVLQDEEVLASLERATLDFKPLHKPNGFITLPQLGNCEKMSLSSKVSLPPIPAVSNIKSLSFPKLDSDDSNQKTAKLASTFHSTSCLRNGTFQNSLKPSTQSSASELNGHHTLGLSALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGPTVTPPNFSVSQVPNMPSCPQAYSELQMLSPSERQCVETVVNMGYSYECVLRAMKKKGENIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNALEDLMARAGAS", "length": 502 }, "evidence": [ { "id": "F1SEB1", "url": "https://omabrowser.org/oma/group/F1SEB1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" } ], "pmid": "" }, { "name": "ESCRT I complex", "id": "GO:0000813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000813", "evidence": [ { "database": "UniProtKB", "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway", "id": "GO:0043162", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043162", "evidence": [ { "database": "UniProtKB", "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin binding", "id": "GO:0043130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043130", "evidence": [ { "database": "UniProtKB", "id": "F1SEB1", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SEB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" }, { "id": "PS50030", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50030" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UBA", "eco_id": "ECO_0000259", "start_pos": 389, "end_pos": 430, "start_aa": "Ser", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SEB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEB1" }, { "id": "PS51497", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51497" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UMA", "eco_id": "ECO_0000259", "start_pos": 17, "end_pos": 63, "start_aa": "Leu", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 334 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 366, "end_pos": 368 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEB9-1", "uniprot_ac": "F1SEB9", "uniprot_id": "F1SEB9_PIG", "mass": { "chemical_mass": 17741.0, "monoisotopic_mass": 17741.0 }, "refseq": { "ac": "XP_003130706", "name": "ribonuclease P protein subunit p25-like protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130706" }, "gene_names": [ { "name": "RPP25L", "type": "recommended", "evidence": [ { "id": "F1SEB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEB9" } ] }, { "name": "RPP25L", "type": "synonym", "evidence": [ { "id": "XP_003130706", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130706" } ] } ], "protein_names": [ { "name": "Ribonuclease P protein subunit p25-like protein", "type": "recommended", "evidence": [ { "id": "F1SEB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEB9/entry#names_and_taxonomy" } ] }, { "name": "Rpp25-like protein", "type": "synonym", "evidence": [ { "id": "F1SEB9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEB9/entry#names_and_taxonomy" } ] }, { "name": "ribonuclease P protein subunit p25-like protein", "type": "synonym", "evidence": [ { "id": "XP_003130706", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130706" } ] } ], "function": [ { "annotation": "May be a component of ribonuclease P or MRP.", "evidence": [ { "database": "UniProtKB", "id": "F1SEB9", "url": "https://www.uniprot.org/uniprotkb/F1SEB9#function" }, { "database": "UniProtKB", "id": "ARBA00060235", "url": "https://www.uniprot.org/uniprotkb/ARBA00060235#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SEB9", "url": "https://www.uniprot.org/uniprotkb/F1SEB9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RPP25L", "url": "https://www.uniprot.org/uniprotkb/F1SEB9", "locus": { "chromosome": "10", "start_pos": 32191426, "end_pos": 32189204, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010973", "url": "https://www.ensembl.org/id/ENSSSCG00000010973" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010973", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010973", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100522095", "url": "https://www.ncbi.nlm.nih.gov/gene/100522095", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036882", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036882", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051958", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051958", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522095", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522095", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RNLPVIW", "url": "https://omabrowser.org/oma/group/RNLPVIW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SEB9", "url": "https://www.orthodb.org/?gene=F1SEB9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13516", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13516", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13516:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13516:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01918", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01918", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003130706", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003130706", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SEB9", "url": "https://www.uniprot.org/uniprotkb/F1SEB9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEB9-1", "url": "https://www.uniprot.org/uniprotkb/F1SEB9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGPMPSSSCGPRPRRRARDTRF", "length": 163, "header": "tr|F1SEB9-1|F1SEB9_PIG Isoform 1 of Ribonuclease P protein subunit p25-like protein OS=Sus scrofa OX=9823 GN=RPP25L PE=3 SV=1 CANONICAL=F1SEB9-1" }, "isoforms": [ { "isoform_ac": "F1SEB9-1", "url": "https://www.uniprot.org/uniprotkb/F1SEB9/entry#F1SEB9-1", "sequence": { "sequence": "MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGPMPSSSCGPRPRRRARDTRF", "length": 163, "header": "tr|F1SEB9-1|F1SEB9_PIG Isoform 1 of Ribonuclease P protein subunit p25-like protein OS=Sus scrofa OX=9823 GN=RPP25L PE=3 SV=1 CANONICAL=F1SEB9-1" }, "locus": { "chromosome": "10", "start_pos": 32190575, "end_pos": 32190087, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012010.3", "url": "https://www.ensembl.org/id/ENSSSCT00000012010.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011702.2", "url": "https://www.ensembl.org/id/ENSSSCP00000011702.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEB9", "url": "https://www.uniprot.org/uniprotkb/F1SEB9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522095", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522095", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y2F2-1", "protein_name": "Ribonuclease P/MRP subunit p25 like", "gene_name": "RPP25L", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MENYKKTKIVEKPCPLPFTDLPPDIIEMKVKDGSKIRNLMGYAIGKMELDSVRQILFTGSGKAVSKTITCVEIMKRRLKELHQITKVLFKQIEEIWEPIVPEAGLDALTVKRNIPAICVLLSKDALDPQEPGYQAPGSFDAFWIETLKAESQAQMKRKQVECLGSPEQSPETERLVGVAWGFYRNQPAALAGKLLLNTGLQSC", "length": 203 }, "evidence": [ { "id": "F1SEB9", "url": "https://omabrowser.org/oma/group/F1SEB9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q2KIR4-1", "protein_name": "Ribonuclease P protein subunit p25-like protein", "gene_name": "RPP25L", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRAGSKIRNLLGLALERLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLYQLTKLRFLQTEDSWVPTSPDTGLDPLTVRSHVPAVWVLLSRDPLDPNEYGYQPPGAPPDLGPTPASSCGPQPRRRARDTRF", "length": 163 }, "evidence": [ { "id": "F1SEB9", "url": "https://omabrowser.org/oma/group/F1SEB9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8N5L8-1", "protein_name": "Ribonuclease P protein subunit p25-like protein", "gene_name": "RPP25L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEHYRKAGSVELPAPSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSARHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPASPDTGLDPLTVRRHVPAVWVLLSRDPLDPNECGYQPPGAPPGLGSMPSSSCGPRSRRRARDTRS", "length": 163 }, "evidence": [ { "id": "F1SEB9", "url": "https://omabrowser.org/oma/group/F1SEB9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99JH1-1", "protein_name": "Ribonuclease P protein subunit p25-like protein", "gene_name": "Rpp25l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEQYRRAGSVELPASSPMPQLPPDTLEMRVRDGSKIRNLLGLALGRLEGGSTRHVVFSGSGRAAGKAVSCAEIVKRRVPGLHQLTKLRFLQTEDSWVPTSPDTGLDPLTVRRHVPAVWVLLSRDPLDPSECGYQPPGAPPGLGSIPSPSCGPRPRRRARDTRS", "length": 163 }, 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{ "id": "F1SEC7-1", "url": "https://www.uniprot.org/uniprotkb/F1SEC7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNSWDAGLAGLLVGTMGVSLLSNALVLLCVLHSADIRRQAPALFTLNLTCGNLLCTVVNMPLTLAGVVAQRQPAGDRLCRLAAFLDTFLATNSMLSMAALSIDRWVAVVFPLSYRAKMRLRDAALMVAYTWLHALAFPAAALALSWLGFHQLYASCTLCSRRPDERLRFAVFTGAFHALSFLLSFVVLCCTYFKVLKVARFHCKRIDVITMQTLVLLVDIHPSVRERCLEEQRRRRQRATKKISTFIGTFLVCFAPYVITRLVELSAVPISSHWGVLSKCLAYSKAASDPFVYSLLRHQYRKSYKEILNRILHRRSLRSSGFSGDSHSQNILPVSE", "length": 336, "header": "tr|F1SEC7-1|F1SEC7_PIG Isoform 1 of G-protein coupled receptor 26 OS=Sus scrofa OX=9823 GN=GPR26 PE=4 SV=1 CANONICAL=F1SEC7-1" }, "isoforms": [ { "isoform_ac": "F1SEC7-1", "url": "https://www.uniprot.org/uniprotkb/F1SEC7/entry#F1SEC7-1", "sequence": { "sequence": 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[ "Protein" ] }, { "id": "F1SED9-1", "url": "https://www.uniprot.org/uniprotkb/F1SED9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRYWGEIPISSSQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIAAAQAQNQQQTEGVKTEEGEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFECANESVLETLTDVAHEYCLKFTKLLRFAVDQEARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKDYHSYMLQISKQLSEEYERIVNPEKATEDTKPVKIKEEPVSDITFPVSEELEADLASGDQSLPMGVHRAQSERFPSNLEVEASPQASSAEANASLFWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHSTDSFMGSSPVFNQRCKKRMRKI", "length": 412, "header": "tr|F1SED9-1|F1SED9_PIG Isoform 1 of STAGA complex 65 subunit gamma OS=Sus scrofa OX=9823 GN=SUPT7L PE=4 SV=2 CANONICAL=F1SED9-1" }, "isoforms": [ { "isoform_ac": "A0A4X1TM00-1", "url": "https://www.uniprot.org/uniprotkb/F1SED9/entry#A0A4X1TM00-1", "sequence": { "sequence": "MNLESGKGEPVTELSWHSCRQLLYQAVATILAHAGFECANESVLETLTDVAHEYCLKFTKLLRFAVDQEARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKDYHSYMLQISKQLSEEYERIVNPEKATEDTKPVKIKEEPVSDITFPVSEELEADLASGDQSLPMGVHRAQSERFPSNLEVEASPQASSAEANASLFWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHSTDSFMGSSPVFNQRCKKRMRKI", "length": 279, "header": "tr|A0A4X1TM00-1|A0A4X1TM00_PIG Computationally mapped isoform of STAGA complex 65 subunit gamma OS=Sus scrofa OX=9823 GN=SUPT7L PE=4 SV=1 CANONICAL=F1SED9-1" }, "locus": { "chromosome": "3", "start_pos": 111539654, "end_pos": 111533243, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090476.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090476.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070345.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070345.1" } ] } }, { "isoform_ac": "F1SED9-1", "url": "https://www.uniprot.org/uniprotkb/F1SED9/entry#F1SED9-1", "sequence": { "sequence": "MLRYWGEIPISSSQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIAAAQAQNQQQTEGVKTEEGEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFECANESVLETLTDVAHEYCLKFTKLLRFAVDQEARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKDYHSYMLQISKQLSEEYERIVNPEKATEDTKPVKIKEEPVSDITFPVSEELEADLASGDQSLPMGVHRAQSERFPSNLEVEASPQASSAEANASLFWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHSTDSFMGSSPVFNQRCKKRMRKI", "length": 412, "header": "tr|F1SED9-1|F1SED9_PIG Isoform 1 of STAGA complex 65 subunit gamma OS=Sus scrofa OX=9823 GN=SUPT7L PE=4 SV=2 CANONICAL=F1SED9-1" }, "locus": { "chromosome": "3", "start_pos": 111539654, "end_pos": 111534257, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009353.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009353.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009113.3", "url": "https://www.ensembl.org/id/ENSSSCP00000009113.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521661", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521661", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1N8A3-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLRYWGEIPVPSNQANRSSFDLLQREFRTVEVQDPPLHQPSANKPRPTTMLDVPSEPCSLTIHTIQLIQHNRRLRSLIAMAQAQNQQQAEGIKTEDNEPLPSRPASPPLPDDLLPLDSKPPKMPFQLRHSDPESDFYRGKGEPVTELSWSSCRQLLYQSMATILAHTGFECANESVLETLTDIAHEYCLKFTKLLRFAVDREARLGHTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKDYHSYMLQVSKQLSEEYEKIVNPEKAAEDTKPVKIKEEPVSDITFPISEELEGDLASGDQSLPVGVLGAQSERFSANLEVEASPQTSGAEVNASPLWNLAQVKMEPQENEEANVHGHGVLGSDVFEEPMSGMSEAGIAQSPNGSESSYGSHSADSLMGSSPVFNQRCKKKMKKM", "length": 412 }, "evidence": [ { "id": "F1SED9", "url": "https://omabrowser.org/oma/group/F1SED9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3GW96-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "Supt7l", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLRYWGEIPIPSGQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQTQSQQQREGVKAEESEPLPSCPGSPPLPDDLQPLDCKNPNAPFQVRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFECANESVLETLTDVAHEYCLKFTKLLRFAVDREAMLGQTPFPDVMEQVFHEVGIGSMLSLQKFWQHRIKDYHTYMLQISKQLSEEYERIVNPEKATEDTKPVKIKEEPVSDITFPISEELEADLASGDQSLPIGVLGAQSERFPSNLEVEASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGISEAGIPQSPEDSDSSYGSHSTDSLMGSSPVFNQRCKKKMRKI", "length": 412 }, "evidence": [ { "id": "F1SED9", "url": "https://omabrowser.org/oma/group/F1SED9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNLQRYWGEIPISSSQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFDCANESVLETLTDVAHEYCLKFTKLLRFAVDREARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKDYHSYMLQISKQLSEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQSLPMGVLGAQSERFPSNLEVEASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHSTDSLMGSSPVFNQRCKKRMRKI", "length": 414 }, "evidence": [ { "id": "F1SED9", "url": "https://omabrowser.org/oma/group/F1SED9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CZV5-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "Supt7l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLRYWGEIPIPSGQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRSLIATAQTQSQQQTEGVKAEESEPLPSCPGSPPLPDDLQPLDCKNPNAPFQIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHTGFECANESVLETLTDVAHEYCLKFTKLLRFAVDREALLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKDYHTYMLQISKQLSEEYERIVNPEKATEDTKPVKIKEEPVSDITFPVSEELEADLASGDQSLPIGVLGAQSERFPSNLEVEASPQAPSAEVNASPLWNLAHVKMEPQESEEGNVSAHGVLGSDVFEEPMSGMSEAGLPQSPDDSDSSYGSHSTDSLMGSSPVFNQRCRKRMRKI", "length": 412 }, "evidence": [ { "id": "F1SED9", "url": "https://omabrowser.org/oma/group/F1SED9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "pmid": "" }, { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "pmid": "" }, { "name": "SAGA complex", "id": "GO:0000124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000124", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "pmid": "" }, { "name": "maintenance of protein location in nucleus", "id": "GO:0051457", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051457", "evidence": [ { "database": "UniProtKB", "id": "F1SED9", "url": "https://www.uniprot.org/uniprotkb/F1SED9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 16, "end_pos": 18, "annotation": "n_glycosylation_sequon" }, { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 330, "end_pos": 332, "annotation": "n_glycosylation_sequon" }, { "start_pos": 351, "end_pos": 353, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SED9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SED9" }, { "id": "SM00576", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00576" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Bromodomain associated", "eco_id": "ECO_0000259", "start_pos": 149, "end_pos": 228, "start_aa": "Trp", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 16, "end_pos": 18 }, { "start_pos": 173, "end_pos": 175 }, { "start_pos": 330, "end_pos": 332 }, { "start_pos": 351, "end_pos": 353 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEE6-1", "uniprot_ac": "F1SEE6", "uniprot_id": "F1SEE6_PIG", "mass": { "chemical_mass": 48299.0, "monoisotopic_mass": 48299.0 }, "refseq": { "ac": "XP_003483618", "name": "uncharacterized protein C10orf88 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483618" }, "gene_names": [ { "name": "LOC100620521", "type": "recommended", "evidence": [ { "id": "F1SEE6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEE6" } ] }, { "name": "LOC100620521", "type": "synonym", "evidence": [ { "id": "XP_003483618", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483618" } ] } ], "protein_names": [ { "name": "Protein associated with ABC transporters", "type": "recommended", "evidence": [ { "id": "F1SEE6", "database": "UniProtKB", "url": 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"MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIALVGLIGAVKHHQVLLFFYMIILLLVFIFQFSVSCACLALNQGQQSQLLEVGWNNTASARNDIQRNLNCCGFRRLNPNDTCLASCMKSRHSCSPCAPIIGKYAGEVLQFVGGIGLFFSFTEILGVWLTYRYRNQKDPRANPSAFL", "length": 204, "header": "tr|F1SEI8-1|F1SEI8_PIG Isoform 1 of Tetraspanin 13 OS=Sus scrofa OX=9823 GN=TSPAN13 PE=1 SV=3 CANONICAL=F1SEI8-1" }, "locus": { "chromosome": "9", "start_pos": 86032345, "end_pos": 85996848, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016737.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016737.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016291.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016291.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe 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Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEJ0", "url": "https://www.uniprot.org/uniprotkb/F1SEJ0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627896", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627896", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K8N6-1", "protein_name": "Ankyrin repeat and MYND domain-containing protein 2", "gene_name": "Ankmy2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGHIKKGELTQEEKELLEVIGKGTVREAGTLLSSKNVHVNCLDENGMTPLMHAAYKGKLEMCKLLLRHGADVNCHQHVHGYTALMFAALSGNKDITWAMLEAGAETDVVNSVGRTASQMAAFVGQYDCVAIINNFFPRERLDYYTKPQGLDKEPKLPPKLAGPLHKIITTTNLHPVKIVMLVSENPLLADAAALGKCYKVMDLICEKCMKQRDMNEVLAMKMHYISCIFQKCITFLKEGENKLDALIKSLLKGRASDGFPVYQEKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSVCKMVIYCDQICQKTHWFAHKKMCKSLKDVYEKQQTEAAKQKRQEEANANSNHVNEDEPEAEVGISHEDPTPGESVEREEEASKEAELGSAQDAPAGPQLSEE", "length": 436 }, "evidence": [ { "id": "F1SEJ0", "url": "https://omabrowser.org/oma/group/F1SEJ0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1NM13-1", "protein_name": "Ankyrin repeat and MYND domain-containing protein 2", "gene_name": "ANKMY2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPPRKGELSPEEKDLLGVIAKGNVEEAGRLLGSKNVHVNCLDEHGMTPLMHAAYKGKVDMCRLLLRHGADVNCNEHEHGYTALMFAGLSGNKEITWMMLEAGAETDVVNSVGRTAAQMAAFVGQHDCVTIINNFFPRERLDYYTKPQGLDKEPKLPVKLAGPLHKIITTTNMHPVKIVLLVKENPLLAEVEALQKCYRVLDLICEKCMKQKDMNEVLAMKMHYISCIFQKCVTFLKEREDKLDGFIKSLLKGRDKDGFPVYQEKLIRESIRKFPYCEATLLQQLVRSIAPVELGSDPTAFSVLTQAITGQVGFVDAEFCTTCGEKGADKRCSVCKMVMYCDQNCQKTHWFTHKKVCKTLKEIHDKQELEAAKEKRRQEKKQKKDEAQLEEAGATSEEQSAPGPDATKEADPNLWIQTDQTEETELTKEPEARAPHPDSPLESETALADIALQKIQDSEE", "length": 460 }, "evidence": [ { "id": "F1SEJ0", "url": "https://omabrowser.org/oma/group/F1SEJ0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HXA1-1", "protein_name": "Ankyrin repeat and MYND domain-containing protein 2", "gene_name": "Ankmy2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGHIKKGELTQEEKELLEVIGKGTVQEAGTLLSSKNVHVNCLDENGMTPLMHAAYKGKLDMCKLLLRHGADVNCHQHEHGYTALMFAALSGNKDITWVMLEAGAETDVVNSVGRTAAQMAAFVGQHDCVAIINNFFPRERLDYYTKPQGLDKEPKLPSKLAGPLHKIITTTNLHPVKIVMLVNENPLLAEAAALSKCYKVMDLICEKCMKQRDMNEVLAMKMHYISCIFQKCINFLKEGENKLDTLIKSLLKGRASDGFPVYQEKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFAHKKMCKSLKDIYEKQQSEAAKHKSQEEKNGKLDVNSNHVNEDQPEATVDISQENSTPADSVEGEREPGGEAGLASTQDAPAEPRLSEE", "length": 440 }, "evidence": [ { "id": "F1SEJ0", "url": "https://omabrowser.org/oma/group/F1SEJ0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0VCS9-1", "protein_name": "Ankyrin repeat and MYND domain-containing protein 2", "gene_name": "ANKMY2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVHIKKGELTQEEKELLEVIGKGTVQEAGTLLGSKNVRVNCLDENGMTPLMHAAYKGKLDMCKLLLRHGADVNCHQHEHGYTALMFAALSGNKDITWVMLEAGAETDVVNSVGRTAAQMAAFVGQHDCVTIINNFFPREKLDYYTKPQGLDKEPKLPPKLAGPLHKIITTTNLHPVKIVMLINENPLLAEEAALNKCYKVMDLICEKCMKQRDMNEVLAMKMHYISCIFQKCINFLKDRENKLDTLIKSLLKGRASDGFPVYQEKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFAHKKICKNLKDIYEKQQLEAAKAKSEEENNSKLDVNSNCVGEERLEEAETRICQKNDNPKDSEEGEKESLQSDAGLEGLQEAAVGPQVSEE", "length": 442 }, "evidence": [ { "id": "F1SEJ0", "url": "https://omabrowser.org/oma/group/F1SEJ0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3TPE9-1", "protein_name": "Ankyrin repeat and MYND domain-containing protein 2", "gene_name": "Ankmy2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGHIKKGELTQEEKELLEVIGKGTVQEAGRLLSSKNVHVNCLDENGMTPLMHAAYKGKLEMCKLLLRHGADASCHQHEHGYTALMFAALSGNKDITWVMLEAGAETDVVNSVGRTAAQMAAFVGQHDCVAIINNFFPRERLDYYTKPQGLDKEPKLPPKLAGPLHKIITTTNLHPVKIVMLVSENPLLADAAALGKCYRVMDLICEKCMKQRDMNEVLAMKMHYISCIFQKCITFLKEGENKLDTLIRSLLKGRASDGFPVYQEKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFAHKKMCKSLKDVYEKQQIEAAKHKRQEEKNGNPNVSSNHVNEDQPEAEEGITQENSIPSDSVEGEKEAANDTGLASAQDAPTGPQLSEE", "length": 440 }, "evidence": [ { "id": "F1SEJ0", "url": "https://omabrowser.org/oma/group/F1SEJ0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IV38-1", "protein_name": "Ankyrin repeat and MYND domain-containing protein 2", "gene_name": "ANKMY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVHIKKGELTQEEKELLEVIGKGTVQEAGTLLSSKNVRVNCLDENGMTPLMHAAYKGKLDMCKLLLRHGADVNCHQHEHGYTALMFAALSGNKDITWVMLEAGAETDVVNSVGRTAAQMAAFVGQHDCVTIINNFFPRERLDYYTKPQGLDKEPKLPPKLAGPLHKIITTTNLHPVKIVMLVNENPLLTEEAALNKCYRVMDLICEKCMKQRDMNEVLAMKMHYISCIFQKCINFLKDGENKLDTLIKSLLKGRASDGFPVYQEKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFTHKKICKNLKDIYEKQQLEAAKEKRQEENHGKLDVNSNCVNEEQPEAEVGISQKDSNPEDSGEGKKESLESEAELEGLQDAPAGPQVSEE", "length": 441 }, "evidence": [ { "id": "F1SEJ0", "url": "https://omabrowser.org/oma/group/F1SEJ0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VTB0-1", "protein_name": "MYND-type domain-containing protein", "gene_name": "Dmel\\CG8003", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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"id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SEJ0", "url": "https://www.uniprot.org/uniprotkb/F1SEJ0" } ], "pmid": "" }, { "name": "enzyme binding", "id": "GO:0019899", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019899", "evidence": [ { "database": "UniProtKB", "id": "F1SEJ0", "url": "https://www.uniprot.org/uniprotkb/F1SEJ0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SEJ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEJ0" }, { "id": "PS50865", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50865" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MYND-type", "eco_id": "ECO_0000259", "start_pos": 320, 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"database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR040879", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040879", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR33517", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33517", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33517:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33517:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF17734", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17734", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SEJ6", "url": "https://www.uniprot.org/uniprotkb/F1SEJ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEJ6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEJ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKRHFMDHRGKQPPIDGATLSLASPESTEESEEVRWSGTTKREEPSPQPGPAPHEEDIYFWGKGRRMLSWSSSPSSESSSEYQSYSQYQSCYSSSYSNEDAAQQSMCAFYTHVKTVQGVAVAWETDSGFEPVSRQPRIHEAEFIKRQRQKGTSYEMASSTDLRWELEASKNNCCLESDDTELLDPLECCLQELRDTPDWLVTTNYGLRCVACCRVFPTLEALLEHAQYGIQEGFSCQIFFEEMLERRQAQGQGQEQEPEEEEQSASDSSEYPRAQVKVLLAQSQKQ", "length": 286, "header": "tr|F1SEJ6-1|F1SEJ6_PIG Isoform 1 of Family with sequence similarity 170 member B OS=Sus scrofa OX=9823 GN=FAM170B PE=4 SV=3 CANONICAL=F1SEJ6-1" }, "isoforms": [ { "isoform_ac": "F1SEJ6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEJ6/entry#F1SEJ6-1", "sequence": { "sequence": "MKRHFMDHRGKQPPIDGATLSLASPESTEESEEVRWSGTTKREEPSPQPGPAPHEEDIYFWGKGRRMLSWSSSPSSESSSEYQSYSQYQSCYSSSYSNEDAAQQSMCAFYTHVKTVQGVAVAWETDSGFEPVSRQPRIHEAEFIKRQRQKGTSYEMASSTDLRWELEASKNNCCLESDDTELLDPLECCLQELRDTPDWLVTTNYGLRCVACCRVFPTLEALLEHAQYGIQEGFSCQIFFEEMLERRQAQGQGQEQEPEEEEQSASDSSEYPRAQVKVLLAQSQKQ", "length": 286, "header": "tr|F1SEJ6-1|F1SEJ6_PIG Isoform 1 of Family with sequence similarity 170 member B OS=Sus 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"F1SEN1-1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAWWKAWIEQEGVSVKGSPHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNAQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIIALMYPPYKYEAKELHDAMEGLGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDLSGFVDPGLALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFNKMYGKTLSSMIMEDTSGDYKNALLNLVGSDP", "length": 327, "header": "tr|F1SEN1-1|F1SEN1_PIG Isoform 1 of Annexin OS=Sus scrofa OX=9823 GN=ANXA8 PE=1 SV=2 CANONICAL=F1SEN1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q9C0-1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1/entry#A0A5G2Q9C0-1", "sequence": { "sequence": "DPTTKSWSSIEQEGVSVKGSPHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNAQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIIALMYPPYKYEAKELHDAMEGLGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDLSGFVDPGLALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFNKMYGKTLSSMIMEDTSGDYKNALLNLVGSDP", "length": 329, "header": "tr|A0A5G2Q9C0-1|A0A5G2Q9C0_PIG Computationally mapped isoform of Annexin OS=Sus scrofa OX=9823 GN=ANXA8 PE=1 SV=1 CANONICAL=F1SEN1-1" }, "locus": { "chromosome": "14", "start_pos": 88332921, "end_pos": 88320058, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068737.1", "url": "https://www.ensembl.org/id/ENSSSCT00000068737.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059892.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059892.1" } ] } }, { "isoform_ac": "A0A5G2QE22-1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1/entry#A0A5G2QE22-1", "sequence": { "sequence": "METQPLVCRDQVSTHTARPATSCTAFTAFWILLQIEQEGVSVKGSPHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNAQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIIALMYPPYKYEAKELHDAMEGLGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDLSGFVDPGLALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFNKMYGKTLSSMIMEDTSGDYKNALLNLVGSDP", "length": 354, "header": "tr|A0A5G2QE22-1|A0A5G2QE22_PIG Computationally mapped isoform of Annexin OS=Sus scrofa OX=9823 GN=ANXA8 PE=1 SV=1 CANONICAL=F1SEN1-1" }, "locus": { "chromosome": "14", "start_pos": 88332477, "end_pos": 88320058, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074050.1", "url": "https://www.ensembl.org/id/ENSSSCT00000074050.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060285.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060285.1" } ] } }, { "isoform_ac": "A0A8W4F9W7-1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1/entry#A0A8W4F9W7-1", "sequence": { "sequence": "MAWWKAWDLTETLKSELSGKFERLIIALMYPPYKYEAKELHDAMEGLGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDLSGFVDPGLALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFNKMYGKTLSSMIMEDTSGDYKNALLNLVGSDP", "length": 265, "header": "tr|A0A8W4F9W7-1|A0A8W4F9W7_PIG Computationally mapped isoform of Annexin OS=Sus scrofa OX=9823 GN=ANXA8 PE=1 SV=1 CANONICAL=F1SEN1-1" }, "locus": { "chromosome": "14", "start_pos": 88337391, "end_pos": 88320056, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094160.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094160.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075087.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075087.1" } ] } }, { "isoform_ac": "F1SEN1-1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1/entry#F1SEN1-1", "sequence": { "sequence": "MAWWKAWIEQEGVSVKGSPHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNAQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIIALMYPPYKYEAKELHDAMEGLGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDLSGFVDPGLALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFNKMYGKTLSSMIMEDTSGDYKNALLNLVGSDP", "length": 327, "header": "tr|F1SEN1-1|F1SEN1_PIG Isoform 1 of Annexin OS=Sus scrofa OX=9823 GN=ANXA8 PE=1 SV=2 CANONICAL=F1SEN1-1" }, "locus": { "chromosome": "14", "start_pos": 88337391, "end_pos": 88320058, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011352.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011352.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011058.3", "url": "https://www.ensembl.org/id/ENSSSCP00000011058.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M6L5-1", "protein_name": "Annexin", "gene_name": "LOC100773073", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAWWKAWVEQEGVTVKGSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNVQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPPYKYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSNLEEDIQADTSGYLERILVCLLQGSRDDVSGFVDPGLALQDAQDLYAAGEKIHGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNLHSYFAERLHYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFQKMYGKTLSSMIMGDTSGDYKNALLNLVGSDP", "length": 327 }, "evidence": [ { "id": "F1SEN1", "url": "https://omabrowser.org/oma/group/F1SEN1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0Z986-1", "protein_name": "Annexin", "gene_name": "ANXA8L1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAWWKAWSEEEGKPVIGVYSNFDPTPDAQTLYKAMKGLGTDEQAIIEVLTKRSNKQRQEIAKSFKAQFGKDLIDSLRSELSGNFERLIVALMYPPYKYEAKELYDAMKGVGTSEDVIIEILASRTKAQIKEIIKAYKEEYGSDLEHDIASETSGYFKQILVCLLQGERDNASLYVDTALARQDAETLFSAGEKIKGTDEIQFITILCKRSATHLLKVFEEYQKLAGKSIEDSIKSETKGSLEDAMLAIVRCTRNIRQYFAERLYHALKGAGTDDGTLIRVIVSRNEVDLNLIKDEFRRIAGQPLSSMIVDDTSGDYKTALLNLCGSD", "length": 327 }, "evidence": [ { "id": "F1SEN1", "url": "https://omabrowser.org/oma/group/F1SEN1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O35640-1", "protein_name": "Annexin A8", "gene_name": "Anxa8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAWWKAWVEQEGVSVKGSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNVQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPPYSYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSTLEEDIQGDTSGYLERILVCLLQGSRDDVSGFVDPGLVLQDAQALHEAGEKIMGTDEMKFITILCTRSATHLMRVFEEYEKIANKCIEDSIKSETHGSLEEAMLTVVKCTRNVHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKGQFKKMYGKTLSSMIMADTSGYYKTALLNLVGTDL", "length": 327 }, "evidence": [ { "id": "F1SEN1", "url": "https://omabrowser.org/oma/group/F1SEN1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P24639-1", "protein_name": "Annexin A7", "gene_name": "nxnA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSYPPNQGYPPQSNSPQPGQYGAPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQGYPPQQGYPPVGVPVGVPVGFAPGMVVGYHQGYFVGTITHDCKHDAEVLRKAMKGIGTNESDLIKVLANRNWAEREQIKREFSAKYSKDLIQDIKSETSGNFEKCLVALLTEPAHFDVEQIHSACAGAGTNENTIIEILVTRSNVQMEYIKQIFKNKHGKSLKDRLESEASGDFKKLLEKLTEPRDESPVINPMQVSKDAEDLYKAGEGKIGTDEKEFIKILTSRSLPHIAAVASEYIKHHKKHSLIKAIDSEFSGSIKTGLIAIVTYALNPYGYFAEILNKSMKGAGTNDNKLIRTVVTQMHNMPQIKTAYSTLFKNSLAHDIQADCSGDFKKLLLDIIS", "length": 462 }, "evidence": [ { "id": "F1SEN1", "url": "https://omabrowser.org/oma/group/F1SEN1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q4FZU6-1", "protein_name": "Annexin A8", "gene_name": "Anxa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWWKAWVEQEGVSVKGSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNVQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSTLEEDIQGDTSGYLERILVCLLQGCRDDVSGFVDPGLALQDAQDLHAAGEKILGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNVHSYFAERLYYAMKGAGTLDGTLIRNIVSRSEIDLNLIKSQFQKMYGKTLSSMIMGDTSGYYKTALLNLVGTDL", "length": 327 }, "evidence": [ { "id": "F1SEN1", "url": "https://omabrowser.org/oma/group/F1SEN1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5VT79-1", "protein_name": "Annexin A8-like protein 1", "gene_name": "ANXA8L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAWWKAWIEQEGVTVKSSSHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAKSFKAQFGKDLTETLKSELSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEEDYGSSLEEDIQADTSGYLERILVCLLQGSRDDVSSFVDPALALQDAQDLYAAGEKIRGTDEMKFITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTQNLHSYFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKKMYGKTLSSMIMEDTSGDYKNALLSLVGSDP", "length": 327 }, "evidence": [ { "id": "F1SEN1", "url": "https://omabrowser.org/oma/group/F1SEN1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q95L54-1", "protein_name": "Annexin A8", "gene_name": "ANXA8", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAWWKAWVEQEGVSVKGSPHFNPDPDAETLYKAMKGIGTNEQAIIDVLTKRSNAQRQQIAKSFKAQFGKDLIETLKSELSGKFERLIIALMYPPYRYEAKELYDAMKGIGTKEGVIIEILASRTKNQLQEIMKAYEEDYGSNLEEDIKADTSGYLERILVCLLQGSRDDLSGYVDPGLALQDAQDLYAAGEKICGTDEMKFITILCTRSATHLMRVFEEYEKIANKSIEDSIKSETHGSLEEAMLTVVKCTRNLHGYFAERLYFAMKGAGTLDGTLIRNIVSRSEIDLNLIKNQFKKMYGKTLSSMIMEDTSGDYKNALLNLVGSDL", "length": 327 }, "evidence": [ { "id": "F1SEN1", "url": "https://omabrowser.org/oma/group/F1SEN1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" }, { "name": "sarcolemma", "id": "GO:0042383", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042383", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" }, { "name": "vesicle membrane", "id": "GO:0012506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012506", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" }, { "name": "chromaffin granule membrane", "id": "GO:0042584", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042584", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" }, { "name": "calcium-dependent phospholipid binding", "id": "GO:0005544", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005544", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" }, { "name": "phosphatidylserine binding", "id": "GO:0001786", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001786", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "endosome organization", "id": "GO:0007032", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007032", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" }, { "name": "endosomal transport", "id": "GO:0016197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016197", "evidence": [ { "database": "UniProtKB", "id": "F1SEN1", "url": "https://www.uniprot.org/uniprotkb/F1SEN1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 225, "end_pos": 227, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [ { "evidence": [ { "id": "A0A8W4F9W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9W7#function" }, { "id": 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"F1SEQ1", "url": "https://www.uniprot.org/uniprotkb/F1SEQ1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 152, "end_pos": 154, "annotation": "n_glycosylation_sequon" }, { "start_pos": 261, "end_pos": 263, "annotation": "n_glycosylation_sequon" }, { "start_pos": 269, "end_pos": 271, "annotation": "n_glycosylation_sequon" }, { "start_pos": 324, "end_pos": 326, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" }, { "start_pos": 90, "end_pos": 92, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SEQ1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 566, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SEQ1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SEQ1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SEQ1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEQ1" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 253, "end_pos": 341, "start_aa": "Pro", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 152, "end_pos": 154 }, { "start_pos": 261, "end_pos": 263 }, { "start_pos": 269, 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"MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWREREAWEALAEVEGLRPPKAKRASDKHIQWLLGADGEVWVWIMGEGPGDKPYEEISEELISERARLQAQREAKELWRQKEAEITKKFRDALANEKARILAGKWKVEMEDRKAAKVLEERIHEEFRRKEEEERKRGEEQIRLQEEQRAKELYWTLKQAQLQSQASEKEEREWEEQLRRSKEADEERSRRAQRARDEYRRHSLRAIQKGTVAGLSSRFRELGQSPEQEARLCHHLPGQGPPPPLAMPGRSWERPLRPVSREVIVRWFKEEQLPRGAGFERNTKSIASWFHGIISREDAEDLLENMAEGAFLVRVSEKIWGYTLSYRLQKGFKHFLVDASGDFYSFLGVDPNRHATLTDLIDFHKEEIITVSGGELLQEPCGQRDSPPDYHLLFE", "length": 431, "header": "tr|F1SEQ5-1|F1SEQ5_PIG Isoform 1 of SH2 domain containing 4B OS=Sus scrofa OX=9823 GN=SH2D4B PE=4 SV=2 CANONICAL=F1SEQ5-1" }, "isoforms": [ { "isoform_ac": "A0A4X1SGR3-1", "url": "https://www.uniprot.org/uniprotkb/F1SEQ5/entry#A0A4X1SGR3-1", "sequence": { "sequence": "MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWREREAWEALAEVEGLRPPKAKRAASDKHIQWLLGADGEVWVWIMGEGPGDKPYEEISEELISERARLQAQREAKELWRQKEAEITKKFRDALANEKARILAGKWKVEMEDRKAAKVLEERIHEEFRRKEEEERKRGEEQIRLQEEQRAKELYWTLKQAQLQSQASEKEEREWEEQLRRSKEADEERSRRAQRARDEYRRHSLRAIQKGTVAGLSSRFRELGQSPEQEARLCHHLPGQGPPPPLAMPGRSWERPLRPVSREVIVRWFKEEQLPRGAGFERNTKSIASWFHGGNYHCFRGRVAAGTLWTEGQPARLPSLV", "length": 357, "header": "tr|A0A4X1SGR3-1|A0A4X1SGR3_PIG Computationally mapped isoform of SH2 domain containing 4B OS=Sus scrofa OX=9823 GN=SH2D4B PE=4 SV=1 CANONICAL=F1SEQ5-1" }, "locus": { "chromosome": "14", "start_pos": 82464623, "end_pos": 82380112, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088576.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088576.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067488.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067488.1" } ] } }, { "isoform_ac": "F1SEQ5-1", "url": "https://www.uniprot.org/uniprotkb/F1SEQ5/entry#F1SEQ5-1", "sequence": { "sequence": "MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWREREAWEALAEVEGLRPPKAKRASDKHIQWLLGADGEVWVWIMGEGPGDKPYEEISEELISERARLQAQREAKELWRQKEAEITKKFRDALANEKARILAGKWKVEMEDRKAAKVLEERIHEEFRRKEEEERKRGEEQIRLQEEQRAKELYWTLKQAQLQSQASEKEEREWEEQLRRSKEADEERSRRAQRARDEYRRHSLRAIQKGTVAGLSSRFRELGQSPEQEARLCHHLPGQGPPPPLAMPGRSWERPLRPVSREVIVRWFKEEQLPRGAGFERNTKSIASWFHGIISREDAEDLLENMAEGAFLVRVSEKIWGYTLSYRLQKGFKHFLVDASGDFYSFLGVDPNRHATLTDLIDFHKEEIITVSGGELLQEPCGQRDSPPDYHLLFE", "length": 431, "header": "tr|F1SEQ5-1|F1SEQ5_PIG Isoform 1 of SH2 domain containing 4B OS=Sus scrofa OX=9823 GN=SH2D4B PE=4 SV=2 CANONICAL=F1SEQ5-1" }, "locus": { "chromosome": "14", "start_pos": 82464627, "end_pos": 82380112, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011322.2", "url": "https://www.ensembl.org/id/ENSSSCT00000011322.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011030.2", "url": "https://www.ensembl.org/id/ENSSSCP00000011030.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEQ5", "url": "https://www.uniprot.org/uniprotkb/F1SEQ5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153283", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153283", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y2J8-1", "protein_name": "SH2 domain containing 4B", "gene_name": "SH2D4B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLQQILRDMYIDPELLAELNEEQKQILFYKMREEQLRRWKEREEKARMEEAMLTKTARRKQSNGKRVQWLRGNDGEVWVWVMGEAPGDKPYEQISEELIAERARQQAQKEAEELWRQKEAEITKKFRDAMAQEKARIVAEKWKIEMEDRKAAKLEEEKIQEDLKKREEEERQKGEEQIRQQEEIRAKELYLSLKQAQQHGQHSDDDHEWKEQLRRSKAADEERSHKARRARDEYRRQSLRAIQKGRVADLSNLFQGTGLNNDQETKLNSSSESPLLSHSVASSKIWERPSRPFSREVIIRWFKEEQVPRRAGFERNTNRIAQWFHGIISRQEAEELLMNKSEGTFLVRVSEKIWGYALSYRQQSGFKHFLVDASGDFYSFLGVDPNRHATLTDLIDFHKEEIITSSGGELLLEPCGQQKNPPDYSPLFE", "length": 429 }, "evidence": [ { "id": "F1SEQ5", "url": "https://omabrowser.org/oma/group/F1SEQ5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7J8T6-1", "protein_name": "SH2 domain-containing protein 4B", "gene_name": "Sh2d4b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLQQILHDMYIDPELLAELSDVQKHILFYKMREEQLRRWREREAWDTLAQAEGLRPAKVKRASNKHIQWLLGADGEVWVWVMGEGPGDKPYEEISEELIAERARLQAQREAEELWRQKEAEITKKFRDALANEKARILAERWKVEMEDRKAAKILEERIHEEFKRKEEEERRRGEEQIRLQEEQRAKELYWTLKQAQLHCQASEKEEREWEEQLRRSKAADEERSRRAQRARDEYRRHSLRAIQKGTVAGLSTMFQELGQNHEQEAKLYHQLPRTSPPSPLTEPDRTWERPLRPLSREVIVRWFKEEQLPRRAGFERNTKSIAPWFHGIISRENAEDLLENMTEGAFLVRVSEKIWGYTLSYRLQRGFKHFLVDASGDFYSFLGVDPNRHATLTDLIDFHKEEIITVSGGELLQEPCGQRGSPPDYHLLFE", "length": 431 }, "evidence": [ { "id": "F1SEQ5", "url": "https://omabrowser.org/oma/group/F1SEQ5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0ABK0LUE3-1", "protein_name": "SH2 domain containing 4B", "gene_name": "Sh2d4b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLQQILQDMYIDPELLAELSDVQKHILFYKMREEQLRRWREREAWDALAQAEGLRPAKVKRASNKHIQWLLGADGEVWVWVMGEGPGDKPYEEISEELIAERARLQAQKEAEELWRQKEAEITKKFRDALANEKARILAEKWKVEMEDRKAAKVLEERIHEEFKRKEEEERRRGEEQIRLQEEQRAKELYWTLKQAQLHCQDSENEEREWEEQLRRSKAADEERSRRAQRARDEYRRHSLRAIQKGTVAGLSTMFQELGQNHEQEARLYHQLPGTRPPSPLTGPDRTWERPLRPLSREVIVRWFKEEQLPRRAGFERNTKSIAPWFHGIISRENAEDLLENMTEGAFLVRVSEKIWGYTLSYRLQRGFKHFLVDASGDFYSFLGVDPNRHATLTDLIDFHKEEIITVSGGELLQEPCGQRDSPPDYHLLFE", "length": 431 }, "evidence": [ { "id": "F1SEQ5", "url": "https://omabrowser.org/oma/group/F1SEQ5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A6X942-1", "protein_name": "SH2 domain-containing protein 4B", "gene_name": "Sh2d4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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{ "id": "F1SER7-1", "url": "https://www.uniprot.org/uniprotkb/F1SER7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKYKENAETCGAIKTIDKHGFKDSGVNQLPGYHVRDKDLGKIHRAACEGDVAKVEQILLLRRNGPNDKDKRNRTALHLACAGGRPAVVTLLVKWKCQLNICDSENRTALIKAVQCQQEECTSILLEHGADPNLVDVKGYTALHYAAFGPNISIAAKLLSYNANIEARDKDDLTPLLLAVSENQQQMVEFLLQKEANIHAVDKMKRTALILAVNFASSSVVRLLLEQGVDISPQDCYGRNAEDYASSANEFWIIEFSSLGERQFLHSCRSSLNFSVIFWSFQCIDVSVFYVVTCISSFSGQARGLVCFICRAYSHASTLYISNVYCLMLWMSECTKHPTLYPQELLMCFVCFSFLLNAGSLSLGAVLAYERSLELKNNRCEHLKAKVKNMESTISGLRKELSETKEVKSQLEHQMAEWQGELCSLRLSLKQEEEQRKKADMLSEEIREQLRREEEQCSKETELKQQLELTVEGLQGELKAVRDRLNQVSDSHEKATNLSHENLMMQDEIATLKREIDTIKNENQEKEKKYLDNIEIVKQKNDELQKAIKLNEEKLTQTYSGQLHDLTAENTRLKSKLKKEEQKKESLETDVALYCSKLTTVMHDHQQSQTSKRDLELTFQRARDEWLCLQDKMNLEMSNLKDHNELLLQQQSDTESKFNSIDIELHHTRDALREKSLVLEQVQRELSQAQCQKKESEDLCRREQGKVKEYMGKQERLEERLAQLESENLFLRQQLDDAQNKIESKEKMVMDSQERFQDILKTFQDQKEKETLMLQESLKKSTNELHLLKERLSRAENVKTQRAVSIQKEKGFSDLLKGSSDMMEKISEMLIPQMSILTLRFGCVDDLASPSRFPRGTHV", "length": 858, "header": "tr|F1SER7-1|F1SER7_PIG Isoform 1 of CCDC144C-like coiled-coil domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=F1SER7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPU4-1", "url": "https://www.uniprot.org/uniprotkb/F1SER7/entry#A0A286ZPU4-1", "sequence": { "sequence": "MKKFFGFGSKTTVLSAGSSGEGSSGVNQLPGYHVRDKDLGKIHRAACEGDVAKVEQILLLRRNGPNDKDKRNRTALHLACAGGRPAVVTLLVKWKCQLNICDSENRTALIKAVQCQQEECTSILLEHGADPNLVDVKGYTALHYAAFGPNISIAAKLLSYNANIEARDKDDLTPLLLAVSENQQQMVEFLLQKEANIHAVDKMKRTALILAVNFASSSVVRLLLEQGVDISPQDCYGRNAEDYAVIKGHQIMHDLILKYKGEKELKTPSRDSILDRTAEGPPRQTSGETESKQASPEKYPHSKPPVGVTNVRKIKVGTKDLPTSRSDRTAEGPPRQTSGETESKQDVPQRPPWASGLGNSKMAKQEDPRNRGSLSLGAVLAYERSLELKNNRCEHLKAKVKNMESTISGLRKELSETKEVKSQLEHQMAEWQGELCSLRLSLKQEEEQRKKADMLSEEIREQLRREEEQCSKETELKQQLELTVEGLQGELKAVRDRLNQVSDSHEKATNLSHENLMMQDEIATLKREIDTIKNENQEKEKKYLDNIEIVKQKNDELQKAIKLNEEKLTQTYSGQLHDLTAENTRLKSKLKKEEQKKESLETDVALYCSKLTTVMHDHQQSQTSKRDLELTFQRARDEWLCLQDKMNLEMSNLKDHNELLLQQQSDTESKFNSIDIELHHTRDALREKSLVLEQVQRELSQAQCQKKESEDLCRREQGKVKEYMGKQERLEERLAQLESENLFLRQQLDDAQNKIESKEKMVMDSQERFQDILKTFQDQKEKETLMLQESLKKSTNELHLLKERLSRAENVKTQRALQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKAIKKLQARAIEKLLKNPLAPRSLQEAQDRYMEALKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKMQHQVQKLEKENAELKDTNKMQAGTIEELQRNPPGPSSLQEAQDRYMEAAKCIEKSSIKCK", "length": 1499, "header": "tr|A0A286ZPU4-1|A0A286ZPU4_PIG Computationally mapped isoform of CCDC144C-like coiled-coil domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F1SER7-1" }, "locus": { "chromosome": "17", "start_pos": 8975243, "end_pos": 8905068, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049524.4", "url": "https://www.ensembl.org/id/ENSSSCT00000049524.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033629.3", "url": "https://www.ensembl.org/id/ENSSSCP00000033629.3" } ] } }, { "isoform_ac": "F1SER7-1", "url": "https://www.uniprot.org/uniprotkb/F1SER7/entry#F1SER7-1", "sequence": { "sequence": "MKYKENAETCGAIKTIDKHGFKDSGVNQLPGYHVRDKDLGKIHRAACEGDVAKVEQILLLRRNGPNDKDKRNRTALHLACAGGRPAVVTLLVKWKCQLNICDSENRTALIKAVQCQQEECTSILLEHGADPNLVDVKGYTALHYAAFGPNISIAAKLLSYNANIEARDKDDLTPLLLAVSENQQQMVEFLLQKEANIHAVDKMKRTALILAVNFASSSVVRLLLEQGVDISPQDCYGRNAEDYASSANEFWIIEFSSLGERQFLHSCRSSLNFSVIFWSFQCIDVSVFYVVTCISSFSGQARGLVCFICRAYSHASTLYISNVYCLMLWMSECTKHPTLYPQELLMCFVCFSFLLNAGSLSLGAVLAYERSLELKNNRCEHLKAKVKNMESTISGLRKELSETKEVKSQLEHQMAEWQGELCSLRLSLKQEEEQRKKADMLSEEIREQLRREEEQCSKETELKQQLELTVEGLQGELKAVRDRLNQVSDSHEKATNLSHENLMMQDEIATLKREIDTIKNENQEKEKKYLDNIEIVKQKNDELQKAIKLNEEKLTQTYSGQLHDLTAENTRLKSKLKKEEQKKESLETDVALYCSKLTTVMHDHQQSQTSKRDLELTFQRARDEWLCLQDKMNLEMSNLKDHNELLLQQQSDTESKFNSIDIELHHTRDALREKSLVLEQVQRELSQAQCQKKESEDLCRREQGKVKEYMGKQERLEERLAQLESENLFLRQQLDDAQNKIESKEKMVMDSQERFQDILKTFQDQKEKETLMLQESLKKSTNELHLLKERLSRAENVKTQRAVSIQKEKGFSDLLKGSSDMMEKISEMLIPQMSILTLRFGCVDDLASPSRFPRGTHV", "length": 858, "header": "tr|F1SER7-1|F1SER7_PIG Isoform 1 of CCDC144C-like coiled-coil domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=F1SER7-1" }, "locus": { "chromosome": "17", "start_pos": 8975696, "end_pos": 8946900, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007668.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007668.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007461.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007461.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SER7", "url": "https://www.uniprot.org/uniprotkb/F1SER7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 105, "end_pos": 107, "annotation": "n_glycosylation_sequon" }, { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" }, { "start_pos": 272, "end_pos": 274, "annotation": "n_glycosylation_sequon" }, { "start_pos": 496, "end_pos": 498, "annotation": "n_glycosylation_sequon" }, { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SER7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 858, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SER7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SER7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SER7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SER7" }, { "id": "PF14915", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14915" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CCDC144C-like coiled-coil", "eco_id": "ECO_0000259", "start_pos": 485, "end_pos": 816, "start_aa": "Asn", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 105, "end_pos": 107 }, { "start_pos": 150, "end_pos": 152 }, { "start_pos": 272, "end_pos": 274 }, { "start_pos": 496, "end_pos": 498 }, { "start_pos": 72, "end_pos": 74 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SET2-1", "uniprot_ac": "F1SET2", "uniprot_id": "F1SET2_PIG", "mass": { "chemical_mass": 41729.0, "monoisotopic_mass": 41729.0 }, "refseq": { "ac": "XP_020933655", "name": "platelet-derived growth factor receptor-like protein isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933655" }, "gene_names": [ { "name": "PDGFRL", "type": "recommended", "evidence": [ { "id": "F1SET2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SET2" } ] }, { "name": "PDGFRL", "type": "synonym", "evidence": [ { "id": "XP_020933655", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933655" } ] } ], "protein_names": [ { "name": "Platelet-derived growth factor receptor-like protein", "type": "recommended", "evidence": [ { "id": "F1SET2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SET2/entry#names_and_taxonomy" } ] }, { "name": "platelet-derived growth factor receptor-like protein isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020933655", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933655" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SET2", "url": "https://www.uniprot.org/uniprotkb/F1SET2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PDGFRL", "url": "https://www.uniprot.org/uniprotkb/F1SET2", "locus": { "chromosome": "17", "start_pos": 5329511, "end_pos": 5279004, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006988", "url": "https://www.ensembl.org/id/ENSSSCG00000006988" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006988", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006988", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100736738", "url": "https://www.ncbi.nlm.nih.gov/gene/100736738", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042495", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042495", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055238", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055238", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100736738", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736738", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CWGQLCN", "url": "https://omabrowser.org/oma/group/CWGQLCN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SET2", "url": "https://www.orthodb.org/?gene=F1SET2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15360", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15360", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15360:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15360:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21339", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21339", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22854", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22854", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020933655", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933655", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SET2", "url": "https://www.uniprot.org/uniprotkb/F1SET2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SET2-1", "url": "https://www.uniprot.org/uniprotkb/F1SET2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKVWLLLGLLLVHEALEDVTGQHPPKNKRPKEPGENKIKPTNKKVKPKIPKIKDRDSADSVPKTQSIMIQMMDKGRFQKPAATLSLTAGQTLELRCKGNKIAWSYPAYLDTFKDTRLSVKQHERYGQLTLVNSTAADTGEFSCWGQLCNGYICRRDEAKTGSTYIFFTEKGELFVPSPSHFDVVYLNPDKQAVVPCRVTVLSAKVTLHREFPAKEIPANGTDIVYDAKRGFVYLQPHSDHQGVVYCKAEAGGKSQISVKYQLLYAEVPSGPPSTTILASANKVKGGDDISVLCTVLGEPDVEVEFRWIYPGLKDERPVTIQDAWRLIHRGLGHTTRISQSVLTVEDLETIDAGYYICTAQNLRGQTTVATTVEFS", "length": 375, "header": "tr|F1SET2-1|F1SET2_PIG Isoform 1 of Platelet-derived growth factor receptor-like protein OS=Sus scrofa OX=9823 GN=PDGFRL PE=4 SV=3 CANONICAL=F1SET2-1" }, "isoforms": [ { "isoform_ac": "F1SET2-1", "url": "https://www.uniprot.org/uniprotkb/F1SET2/entry#F1SET2-1", "sequence": { "sequence": "MKVWLLLGLLLVHEALEDVTGQHPPKNKRPKEPGENKIKPTNKKVKPKIPKIKDRDSADSVPKTQSIMIQMMDKGRFQKPAATLSLTAGQTLELRCKGNKIAWSYPAYLDTFKDTRLSVKQHERYGQLTLVNSTAADTGEFSCWGQLCNGYICRRDEAKTGSTYIFFTEKGELFVPSPSHFDVVYLNPDKQAVVPCRVTVLSAKVTLHREFPAKEIPANGTDIVYDAKRGFVYLQPHSDHQGVVYCKAEAGGKSQISVKYQLLYAEVPSGPPSTTILASANKVKGGDDISVLCTVLGEPDVEVEFRWIYPGLKDERPVTIQDAWRLIHRGLGHTTRISQSVLTVEDLETIDAGYYICTAQNLRGQTTVATTVEFS", "length": 375, "header": "tr|F1SET2-1|F1SET2_PIG Isoform 1 of Platelet-derived growth factor receptor-like protein OS=Sus scrofa OX=9823 GN=PDGFRL PE=4 SV=3 CANONICAL=F1SET2-1" }, "locus": { "chromosome": "17", "start_pos": 5328535, "end_pos": 5279068, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007653.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007653.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007446.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007446.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SET2", "url": "https://www.uniprot.org/uniprotkb/F1SET2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736738", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736738", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1N1R6-1", "protein_name": "Platelet-derived growth factor receptor-like protein", "gene_name": "PDGFRL", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKIWLLLGLLLMHEALEDVTGQHPPKNKRPKEPGENRIKPTNKKVKPKIPKIKDRDSADPTPKTPSIMTQMMDKGRFQKPAATLSLVAGQTLELRCKGNKIGWSYPAYLDTFKDTRLSVKQHERYGQLTLVNSTAADTGEFSCWGQLCTGYVCRRDEAKTGSTYIFFTEKGELFVPSPSHFDVVYLNPDRQAVVPCRVTVLSAKVTLHREFPAKEIPANGTDIVYDLKRGFVYLQPHVGHQGVVYCKAEAGGKSQISVKYQLLYAEVPRGPPSTTILASSNKVKGGDDVSVLCTVLGEPDVEVEFRWTYPGQKDERPVTIQDSWRLIHRGLGHTTRISQSVLSIEDFETIDAGYYICTAQNLQGQTTVATTVESS", "length": 375 }, "evidence": [ { "id": "F1SET2", "url": "https://omabrowser.org/oma/group/F1SET2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q15198-1", "protein_name": "Platelet-derived growth factor receptor-like protein", "gene_name": "PDGFRL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKVWLLLGLLLVHEALEDVTGQHLPKNKRPKEPGENRIKPTNKKVKPKIPKMKDRDSANSAPKTQSIMMQVLDKGRFQKPAATLSLLAGQTVELRCKGSRIGWSYPAYLDTFKDSRLSVKQNERYGQLTLVNSTSADTGEFSCWVQLCSGYICRKDEAKTGSTYIFFTEKGELFVPSPSYFDVVYLNPDRQAVVPCRVTVLSAKVTLHREFPAKEIPANGTDIVYDMKRGFVYLQPHSEHQGVVYCRAEAGGRSQISVKYQLLYVAVPSGPPSTTILASSNKVKSGDDISVLCTVLGEPDVEVEFTWIFPGQKDERPVTIQDTWRLIHRGLGHTTRISQSVITVEDFETIDAGYYICTAQNLQGQTTVATTVEFS", "length": 375 }, "evidence": [ { "id": "F1SET2", "url": "https://omabrowser.org/oma/group/F1SET2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5RJP7-1", "protein_name": "Platelet-derived growth factor receptor-like protein", "gene_name": "Pdgfrl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKVWLLLGLLLLHEALGDVAGQHPPKNKRPKEQGENRIKPTNKKAKPKIPKIKDRDTADSAPKSQSIMMQAMDNGRFQKPAATVSLMAGQSVELRCKGSKVEWSYPAYLDTFKDSRLTVKQNERYGQLTLVNSTTADTGEFSCWERLCNGYICRRDEARTGSTYIFFTEKGELFVPSPSYFDVVYLNPDRQAVVPCRVTAPSAKVTLHREFPAKEIPANGTDIVYDMKRGFVYLQPHSDHQGVVYCKAEAGGKSQISVKYQLLYVEVPSGPPSTTILASSNKVRGGDDISVLCTVLGEPDVEVEFRWIFPGQKDERPVTIQDTWRLIHRGLGHTTRISQSVITVEDFETIDAGYYICTAQNLRGQTTVATTVEFS", "length": 375 }, "evidence": [ { "id": "F1SET2", "url": "https://omabrowser.org/oma/group/F1SET2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6PE55-1", "protein_name": "Platelet-derived growth factor receptor-like protein", "gene_name": "Pdgfrl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKFWLLLGLLLLHEALEDVAGQHSPKNKRPKEQGENRIKPTNKKAKPKIPKVKDRDSTDSTAKSQSIMMQAMGNGRFQRPAATVSLLAGQTLELRCKGSKVEWSYPAYLDTFKDSRLTVKQSERYGQLTLVNSTAADTGEFSCWEQLCNGYICRRDEAKTGSTYIFFTEKGELFVPSPSYFDVVYLNPDRQAVVPCRVTAPSAKVTLHREFPAKEIPANGTDIVYDMKRGFVYLQPHSDHQGVVYCKAEAGGKSQISVKYQLLYVEVPSGPPSTTILASSNKVRGGDDISVLCTVLGEPDVEVEFRWLFPGQKDERPVTIQDTWRLIHRGLGHTTRISQSVIIVEDFETIDAGYYICTAQNLRGQTTVATTVEFS", "length": 375 }, "evidence": [ { "id": "F1SET2", "url": "https://omabrowser.org/oma/group/F1SET2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F1SET2", "url": "https://www.uniprot.org/uniprotkb/F1SET2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "platelet-derived growth factor receptor activity", "id": "GO:0005017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005017", "evidence": [ { "database": "UniProtKB", "id": "F1SET2", "url": "https://www.uniprot.org/uniprotkb/F1SET2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 132, "end_pos": 134, "annotation": "n_glycosylation_sequon" }, { "start_pos": 219, "end_pos": 221, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SET2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SET2" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 272, "end_pos": 375, "start_aa": "Pro", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 132, "end_pos": 134 }, { "start_pos": 219, "end_pos": 221 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEU6-1", "uniprot_ac": "F1SEU6", "uniprot_id": "F1SEU6_PIG", "mass": { "chemical_mass": 86104.0, "monoisotopic_mass": 86104.0 }, "refseq": { "ac": "XP_020933132", "name": "LON peptidase N-terminal domain and RING finger protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933132" }, "gene_names": [ { "name": "LONRF1", "type": "recommended", "evidence": [ { "id": "F1SEU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" } ] }, { "name": "LONRF1", "type": "synonym", "evidence": [ { "id": "XP_020933132", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933132" } ] } ], "protein_names": [ { "name": "LON peptidase N-terminal domain and RING finger protein 1", "type": "recommended", "evidence": [ { "id": "F1SEU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEU6/entry#names_and_taxonomy" } ] }, { "name": "LON peptidase N-terminal domain and RING finger protein 1", "type": "synonym", "evidence": [ { "id": "XP_020933132", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933132" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SEU6", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LONRF1", "url": "https://www.uniprot.org/uniprotkb/F1SEU6", "locus": { "chromosome": "17", "start_pos": 883322, "end_pos": 917161, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006968", "url": "https://www.ensembl.org/id/ENSSSCG00000006968" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006968", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006968", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16514", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16514", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100525314", "url": "https://www.ncbi.nlm.nih.gov/gene/100525314", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003111", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003111", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015947", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015947", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017907", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017907", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018957", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018957", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046336", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046336", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525314", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525314", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KYKKQGV", "url": "https://omabrowser.org/oma/group/KYKKQGV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SEU6", "url": "https://www.orthodb.org/?gene=F1SEU6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23327", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23327", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23327:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23327:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00097", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00097", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF02190", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02190", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13923", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13923", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020933132", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020933132", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SEU6", "url": "https://www.uniprot.org/uniprotkb/F1SEU6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEU6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEU6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSPAVARSSPGGSQEVAPRPPSRGRFWEVGGDGDRLERAAAESERWELLLRRGELLALGGHLKGALEAYAAALRRGAPVRAECLGTLVDCLVFNYRLRHGLRWSATPAAGAPAGAGGLLSCLGCGGFLSEPVTVPCGHSYCRRCLRRELRARCRLCRDRLPPAAAADAEGTSPRPPTLAAAIAASGFRTSVVLNHLAEKWFPGQRARARAAGRLGELLHQGRYREALAAACEALRAEPSDLTLKIYRAESYAGLQEFKAAIEDLNAVLFQLPNWPEVYFRKGKVLHDAGFLGDALQLFLQCLALDEEFAPAKLEVEKILCDLLTPENLKEGLKDPSWNSLPCIKNKPFGCPSVMDESHSASELSPEQNEEIAEVTSEPVKGSLNRAQSAQAINSTDMPVREDCLKRVSSEPLLSVQEKGVLLKRKLSLLDQDVVVNEDGRNKLKRQGETPNEVCTFSLTCGDIPEELIDASDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQLLEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHIFEPRYRLMIRRSIQTGTKQFGMCVSDTQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKVENEDEIENLRQLHDLVYSQACSWFQNLRDRFRSQILQHFGSMPGREENLQAVPNGPAWCWWLLAVLPVDPRYQLSVLSMKSLKERLTKIQHILTYFSRDQSK", "length": 770, "header": "tr|F1SEU6-1|F1SEU6_PIG Isoform 1 of LON peptidase N-terminal domain and RING finger protein 1 OS=Sus scrofa OX=9823 GN=LONRF1 PE=4 SV=3 CANONICAL=F1SEU6-1" }, "isoforms": [ { "isoform_ac": "F1SEU6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEU6/entry#F1SEU6-1", "sequence": { "sequence": "MSSPAVARSSPGGSQEVAPRPPSRGRFWEVGGDGDRLERAAAESERWELLLRRGELLALGGHLKGALEAYAAALRRGAPVRAECLGTLVDCLVFNYRLRHGLRWSATPAAGAPAGAGGLLSCLGCGGFLSEPVTVPCGHSYCRRCLRRELRARCRLCRDRLPPAAAADAEGTSPRPPTLAAAIAASGFRTSVVLNHLAEKWFPGQRARARAAGRLGELLHQGRYREALAAACEALRAEPSDLTLKIYRAESYAGLQEFKAAIEDLNAVLFQLPNWPEVYFRKGKVLHDAGFLGDALQLFLQCLALDEEFAPAKLEVEKILCDLLTPENLKEGLKDPSWNSLPCIKNKPFGCPSVMDESHSASELSPEQNEEIAEVTSEPVKGSLNRAQSAQAINSTDMPVREDCLKRVSSEPLLSVQEKGVLLKRKLSLLDQDVVVNEDGRNKLKRQGETPNEVCTFSLTCGDIPEELIDASDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHTPYCPLCKESLKEYLADRRYCVTQLLEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHIFEPRYRLMIRRSIQTGTKQFGMCVSDTQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKVENEDEIENLRQLHDLVYSQACSWFQNLRDRFRSQILQHFGSMPGREENLQAVPNGPAWCWWLLAVLPVDPRYQLSVLSMKSLKERLTKIQHILTYFSRDQSK", "length": 770, "header": "tr|F1SEU6-1|F1SEU6_PIG Isoform 1 of LON peptidase N-terminal domain and RING finger protein 1 OS=Sus scrofa OX=9823 GN=LONRF1 PE=4 SV=3 CANONICAL=F1SEU6-1" }, "locus": { "chromosome": "17", "start_pos": 917122, "end_pos": 885288, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007633.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007633.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007428.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007428.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 107, "start_aa": "Thr", "end_pos": 107, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr107", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEU6", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525314", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525314", "resource": "KEGG Pathway" }, { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K313-1", "protein_name": "LON peptidase N-terminal domain and RING finger protein 1", "gene_name": "Lonrf1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSARHAPLLAGRVRSRAPRRFPDRGGGRRRRSSPARAMSSPAVARASPGGNRETAGGPRSRNGPWEVGGGERLERAGAEPGRWELLLRRGELLALGGHLKGALEAFAAALRRGAPARPERLGSLVDCLVFSYRLRHGLRWSAAPAAGAAGLLSCLGCRGFLSEPVTVPCGHSYCRRCLRRELRARCRLCRDRLPPAAAASEGTPRPPPLAAAIADFRTSVVLNHLAEKWFPGQRERARAAGRLGELLHEGRYREALAAACDALRAEPSDLTLKIYRAESYAGLQEFKAALEDLNAVLFQLPNWPEVYFRKGKVLQDAGFLGDALQLFLQCLALDEDFAPAKLQVEKILCDLLSPENVKEGLKGSSWSSLPCTKSKPLGFPSVMEQPHSPPELGLKQTEEQAEDASEPVKGSLNRAQSAQAISAAAVPAREDGLKRVCSEPVLCAQGKGALLKRKLSLLEQDVIINEDGRNKLKKQGESPGEDCMFSIAYGDIPEELIDVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEDLIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMIRRSIQTGTKQFGMCVSDTQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKIENGDEIRSLRELHDLVYSQACSWFQNLRDRFRSQILQHFGSMPEREENLQATPNGPAWCWWLLAVLPVDPRYQLSVLSMKSLEERLTKIQHILTYFSRDQSK", "length": 798 }, "evidence": [ { "id": "F1SEU6", "url": "https://omabrowser.org/oma/group/F1SEU6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0YWF4-1", "protein_name": "LON peptidase N-terminal domain and ring finger 1", "gene_name": "LONRF1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAFSPVAVSSDASPEPGGGGRLGEEADGERRGRLKETAGSSLASLCLGPLAGPRRFGTLVECLVLNYRLRQGPGRGRERGAEGAAEGPLRCCGCGRFLSEPVTVPCGHTYCRRCLRRELRARCRRCRDWLLPAGGTSAAAAPLRTSVVLSQLAEKWFPRECERARTGGRLEELLAQGRFREALGAAGQALRTDPSNLMLRIYRAESYAGLQEYKTAIEDLNFVISKMPNWPEVYFRKGKVLHDSGFVGDALQLFLQCLALDEDFLPAKLEVEKVLHDVLSPEKLGENLKESAWSSPHTRNKSFVLGSEMTESYSNLQLCPEQSSGRSEVLEPVIGSLNRAQSAHALNSTKALAKEDGLKRVSSEPLLSGQEKGALLKRKLSYSEQDTVVCEDGRNKHKKQGENTNRDMKLAYGTVPGNLIDVSDFECSLCMRLFFEPVTTPCGHTFCKGCLERCLDHAPQCPLCKESLKEYLASRKYSITELLEELIMKYLSDELYERKRIHAEETAEHSNLTKNVPMFVCTMAYPTVPCPLHVFEPRYRLMIRRSMETGTKQFGMCISDSQNGFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLQRGMKDGYCTADIEYLEDVKVADEEELKKLRELHNFVYSQACSWFQNLRNKFRTQILQHFGPMPDREENIQAMPNGPAWCWWLLAVLPVDPRYQLSVLSMMSLKDRLIKIQHILTYFSRDQSK", "length": 721 }, "evidence": [ { "id": "F1SEU6", "url": 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"MSSPAVARASPGGNREASGGPRSRNGPWEVGGGGERLERAGAESGRWELLLRRGELLALGGHLKGALEAFAAALRRGAPARPERLGSLVDCLVFSYRLRHGLRWSAAPAAGAAGLLSCLSCRGFLSEPVTVPCGHSYCRRCLRRELRARCRLCRDRLPPAAAASEGTPRPPPLAAAIADFRTSVVLNHLAEKWFPGQRERARAAGRLGELLHEGRYREALAAACDALRAEPSDLTLKIYRAESYAGLQEFKAALEDLNAVLFQLPNWPEVYFRKGKVLQDAGFLGDALQLFLQCLALDEDFAPAKLQVEKILCDLLSPENVREGLKESSWSSLPCIKSKPLGFPSVMEQPHSPAELGLKQPEERVEDAPEPVKGSLSRAQSAQAISAAAVPAREDGLKRVCSEPLLSAQGKGVLLKRKLSLLEQDVLINEDGRSKLKKQSESPSEDCMFSIAYGDIPEELIDVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMIRRSIQTGTKQFGMCVSDTQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKIENGDEIRSLRELHDSVYSQACSWFQNLRDRFRSQILQHFGSMPEREENLQATPNGPAWCWWLLAVLPVDPRYQLSVLSMKSLEERLTKIQHILTYFSRDQSK", "length": 762 }, "evidence": [ { "id": "F1SEU6", "url": "https://omabrowser.org/oma/group/F1SEU6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q17RB8-1", "protein_name": "LON peptidase N-terminal domain and RING finger protein 1", "gene_name": "LONRF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSSPAVARTSPGGSREMAPAPQGRGRFWEVGGGSGHRLERAAAESERWELLLRRGELLALGGHLKGALEAFAAALRRGAPARPECLGALVDCLVFNYRLRHGLGWSAAPVAGADGGAGGLLRCLGCRGFLSEPVTVPCGHSYCRRCLRRELRARCRLCRDRLPPATASATDAEGTAPRPPPLAAAIAASDFRTSVVLNHLAEKWFPGQRERARAAGRLGELLHQGRYREALAAACEALRAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAVLFQLPDWPEVYFRKGKVLCDAGFLGDALQLFLQCLALDEDFAPAKLQVQKILCDLLLPENLKEGLKESSWSSLPCTKNRPFDFHSVMEESQSLNEPSPKQSEEIPEVTSEPVKGSLNRAQSAQSINSTEMPAREDCLKRVSSEPVLSVQEKGVLLKRKLSLLEQDVIVNEDGRNKLKKQGETPNEVCMFSLAYGDIPEELIDVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELSHLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMIRRSIQTGTKQFGMCVSDTQNSFADYGCMLQIRNVHFLPDGRSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKVENEDEIKNLRELHDLVYSQACSWFQNLRDRFRSQILQHFGSMPEREENLQAAPNGPAWCWWLLAVLPVDPRYQLSVLSMKSLKERLTKIQHILTYFSRDQSK", "length": 773 }, "evidence": [ { "id": "F1SEU6", "url": "https://omabrowser.org/oma/group/F1SEU6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SEU6", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SEU6", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F1SEU6", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 394, "end_pos": 396, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SEU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" }, { "id": "PS51787", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51787" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Lon N-terminal", "eco_id": "ECO_0000259", "start_pos": 555, "end_pos": 765, "start_aa": "Thr", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SEU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEU6" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 122, "end_pos": 158, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 107 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 394, "end_pos": 396 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", 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"table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEV5-1", "uniprot_ac": "F1SEV5", "uniprot_id": "F1SEV5_PIG", "mass": { "chemical_mass": 72184.0, "monoisotopic_mass": 72184.0 }, "refseq": { "ac": "XP_013849019", "name": "rhophilin-1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849019" }, "gene_names": [ { "name": "RHPN1", "type": "recommended", "evidence": [ { "id": "F1SEV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEV5" } ] }, { "name": "RHPN1", "type": "synonym", "evidence": [ { "id": "XP_013849019", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849019" } ] } ], "protein_names": [ { "name": "Rhophilin Rho GTPase binding protein 1", "type": "synonym", "evidence": [ { "id": "F1SEV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEV5/entry#names_and_taxonomy" } ] }, { "name": "rhophilin-1", "type": "synonym", "evidence": [ { "id": "XP_013849019", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849019" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SEV5", "url": "https://www.uniprot.org/uniprotkb/F1SEV5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RHPN1", "url": "https://www.uniprot.org/uniprotkb/F1SEV5", "locus": { "chromosome": "4", "start_pos": 1123105, "end_pos": 1132966, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006957", "url": "https://www.ensembl.org/id/ENSSSCG00000006957" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006957", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006957", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": 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"categories": [ "Protein Classification" ] }, { "id": "IPR036274", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036274", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038499", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038499", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047138", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047138", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517344", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517344", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PPVHDYM", "url": "https://omabrowser.org/oma/group/PPVHDYM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SEV5", "url": "https://www.orthodb.org/?gene=F1SEV5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23031", "url": 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"https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013849019", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849019", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SEV5", "url": "https://www.uniprot.org/uniprotkb/F1SEV5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEV5-1", "url": "https://www.uniprot.org/uniprotkb/F1SEV5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVPEERPDGQAAGEESTQLQAAGSSRKGCDQLAQMQRDPLQSRRARIHQQINKELRMRTGAENLYRATSNAQVRETVALELSYVNSSLQLLKEELEGLDGNADAEQPESSSDGIAVPMIPLGLKETKQLDWATPLKELISEHFGEDSASYEAEVRELEDLRQATRTPSRSEAGLELLTAYYHQLCFLEARFATPARNLGPLFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQMGARQDRSSPQGTSRAVEAFRRAAGVFSLLRENFSHAPSPDMSPGSLLVLEQLMTAQAQECVFEGLSLQPPAAPHTCLAQLHLAQEAAQVAAEYRLVHQTMVQPPVRDYVPFSWTTLVLVKAEYFRALAHYQAALALCDGPPAAEVELPALEQVFLGPPAPSEPRAPALPQEWEERRKLGKAHLKRAILGQEEALRLHAVCRALRRVDLLQVVLAQALQRSLAKYSELDLEDDFFEATEAPDIRPKTQQRPEGRAPSVSQVKVADIFHRLGPLSVFSVKNRWRLAGPIHVARGEEGFGFTLRGDSPVLIAAVVPGGRAAAAGLKEGGYIVSVNGQPCRWWKHAEVVAQLKSVGDEGVSLQVATLLPSAEPGPGDHRPALGGLLRSQKECGWETPVPTRASPRPLLGWGRKAGRRKPGRRLSAAP", "length": 659, "header": "tr|F1SEV5-1|F1SEV5_PIG Isoform 1 of Rhophilin Rho GTPase binding protein 1 OS=Sus scrofa OX=9823 GN=RHPN1 PE=3 SV=2 CANONICAL=F1SEV5-1" }, "isoforms": [ { "isoform_ac": "F1SEV5-1", "url": "https://www.uniprot.org/uniprotkb/F1SEV5/entry#F1SEV5-1", "sequence": { "sequence": "MVPEERPDGQAAGEESTQLQAAGSSRKGCDQLAQMQRDPLQSRRARIHQQINKELRMRTGAENLYRATSNAQVRETVALELSYVNSSLQLLKEELEGLDGNADAEQPESSSDGIAVPMIPLGLKETKQLDWATPLKELISEHFGEDSASYEAEVRELEDLRQATRTPSRSEAGLELLTAYYHQLCFLEARFATPARNLGPLFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQMGARQDRSSPQGTSRAVEAFRRAAGVFSLLRENFSHAPSPDMSPGSLLVLEQLMTAQAQECVFEGLSLQPPAAPHTCLAQLHLAQEAAQVAAEYRLVHQTMVQPPVRDYVPFSWTTLVLVKAEYFRALAHYQAALALCDGPPAAEVELPALEQVFLGPPAPSEPRAPALPQEWEERRKLGKAHLKRAILGQEEALRLHAVCRALRRVDLLQVVLAQALQRSLAKYSELDLEDDFFEATEAPDIRPKTQQRPEGRAPSVSQVKVADIFHRLGPLSVFSVKNRWRLAGPIHVARGEEGFGFTLRGDSPVLIAAVVPGGRAAAAGLKEGGYIVSVNGQPCRWWKHAEVVAQLKSVGDEGVSLQVATLLPSAEPGPGDHRPALGGLLRSQKECGWETPVPTRASPRPLLGWGRKAGRRKPGRRLSAAP", "length": 659, "header": "tr|F1SEV5-1|F1SEV5_PIG Isoform 1 of Rhophilin Rho GTPase binding protein 1 OS=Sus scrofa OX=9823 GN=RHPN1 PE=3 SV=2 CANONICAL=F1SEV5-1" }, "locus": { "chromosome": "4", "start_pos": 1132856, "end_pos": 1124718, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007622.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007622.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007419.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007419.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEV5", "url": "https://www.uniprot.org/uniprotkb/F1SEV5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517344", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517344", "resource": "KEGG Pathway" }, { "id": "R-SSC-5666185", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5666185", "resource": "Reactome", "description": "RHO GTPases Activate Rhotekin and Rhophilins" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A096MIZ0-1", "protein_name": "Rhophilin, Rho GTPase binding protein 1", "gene_name": "Rhpn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILEERPDGQGTGEDSPRQQNDGSIRKGHDSFVQNQPGQLHSHRARLHQQISKELRMRTGAENLYRATSNTWVRETVALELSYVNSNLQLLKEELAELSCNADVDQPEGESVTIPMIPLGLKETKELDWATPLKELISEHFGEDGASYETEIQELEDLRQATRTPSRDEVGLDLLAAYYSQLCFLDARFFSPARSPGLLFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQIGARQDCSCTEGTSQAAEAFQRAAGAFRLLRENFSHAPSPDMSAASLSMLEQLMVAQAQECIFRGLLLRASATPDICPDQLQLAQEATQVATEYGLVHRAMAQPPVRDYLPASWTNLARVKAEHFCALAHYHAAMALCESTSAAKGELSRQEDIFQPSATCEPQGPTLPQHPEERRKLAKAHLKRAILGQEEALRLHTLCRVPRKVDLLQVVVTQALRRSLTKYSELEREDDFFEAMEAPDIQPKTHQAPEVSIPSLSQVKVTDFFHRLGPLSVFSTKNRWQLVGPVHMTRGEGGFGFTLRGDSPVLIAAVVPGGQAESAGLKEGDYIVSVNGQPCKWWKHVEVVTQLRSMGEEGVSLQVVSLLPGPEPRGTGPRRPALLWNQRECGFETPTPAHTRPWPILGWSRKNKQSKSGSHPDPCTNRNCITCP", "length": 662 }, "evidence": [ { "id": "F1SEV5", "url": "https://omabrowser.org/oma/group/F1SEV5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0XXU6-1", "protein_name": "Rhophilin Rho GTPase binding protein 1", "gene_name": "RHPN1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MMPPAEDEQSTAEGGEGVGGFALLRALKSGSARKQGCDPFAQTQRSKLQHRRARINQQINKEMRMRAGAENLFRATSNHKVKETVALELSYVNSNLQLLKEELEELNSCMDVYQNDSESISVPMIPLGLKETKELDLLVPLKDFISEHYGEEGVMFEKEIKEFMELRQAMRTPSRNEAGLELLMEYYNQLYFLDSRFFPPSKSLGVFFHWYDSLTGVPSHQRALAFEKGSVLFNIGALHTQIGARQDRASLPGLNQAIDAFQKAAGAFNYLKENFSNAPSLDMSTASLNMLVRLMVAQVQECVFEKVTLLHTQKDFFSWLQLAQEAARVEDVYSLVHQTMTQAHVKDYVPFSWTTMVHVKSEHFKALSHYFAAIALCDCPVASDAELPEHEKAFLQFHITMPEGPSLRVLLQDPEERRKLGKAHLKKAIMKHEEAMRIHGLCKILRKMDILQEVLSFAHKRSLSKYSEIDHEEDFFETGDAPDIHPKTHQKPEIKSPSFSQVKVTDLFHRLGPLSVFSAKNKWYPMRRVHLMRGENGFGFTLRGDSPVLIAGVIPGGCAAEAGLKEGDYIILVNGKDCRWSKHAEVVQLLKSTGEEGVEIGVITLQGSEGPKAAEKKAAAMSSGSGLLKSNKENSRKSLMNSKSASTLLIWNKKSKRSKNSTYSIPFTAVGDNEAMY", "length": 677 }, "evidence": [ { "id": "F1SEV5", "url": "https://omabrowser.org/oma/group/F1SEV5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q61085-1", "protein_name": "Rhophilin-1", "gene_name": "Rhpn1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MILEERPDGQGTGEESSRPQDDGSIRKGYGSFVQNQPGQLQSHRARLHQQISKELRMRTGAENLYRATSNTWVRETVALELSYVNSNLQLLKEELAELSTSVDVDQPEGEGITIPMIPLGLKETKELDWATPLKELISEHFGEDGTSFETEIQELEDLRQATRTPSRDEAGLDLLAAYYSQLCFLDARFFSPSRSPGLLFHWYDSLTGVPAQQRALAFEKGSVLFNIGALHTQIGARQDCSCTEGTNHAAEAFQRAAGAFRLLRENFSHAPSPDMSAASLSMLEQLMIAQAQECIFKGLLLPASATPDICPDQLQLAQEAAQVATEYGLVHRAMAQPPVRDYLPASWTNLAHVKAEHFCALAHYHAAMALCESHPAKGELARQEHVFQPSTPHEPLGPTLPQHPEDRRKLAKAHLKRAILGQEEALRLHTLCRVLRKVDLLQVVVTQALRRSLAKYSQLEREDDFFEATEAPDIQPKTHQTPEGPLSVFSTKNRWQLVGPVHMTRGEGSFGFTLRGDSPVLIAAVVPGGQAESAGLKEGDYIVSVNGQPCKWWKHLEVVTQLRSMGEEGVSLQVVSLLPSPEPRGTGPRRAALLWNQRECGFETPMPTRTRPWPILGWSRKNKQGKTGSHPDPCTNRNCVTCP", "length": 643 }, "evidence": [ { "id": "F1SEV5", "url": "https://omabrowser.org/oma/group/F1SEV5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8TCX5-1", "protein_name": "Rhophilin-1", "gene_name": "RHPN1", "tax_id": 9606, "organism": "Homo 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"database": "PROSITE", "url": "https://prosite.expasy.org/PS51180" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BRO1", "eco_id": "ECO_0000259", "start_pos": 117, "end_pos": 466, "start_aa": "Pro", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SEV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEV5" }, { "id": "PS50106", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50106" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PDZ", "eco_id": "ECO_0000259", "start_pos": 522, "end_pos": 590, "start_aa": "Pro", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SEV5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEV5" }, { "id": "PS51860", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51860" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "REM-1", "eco_id": "ECO_0000259", "start_pos": 30, "end_pos": 104, "start_aa": "Asp", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 268, "end_pos": 270 }, { "start_pos": 85, "end_pos": 87 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", 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{ "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEW4-1", "uniprot_ac": "F1SEW4", "uniprot_id": "F1SEW4_PIG", "mass": { "chemical_mass": 76670.0, "monoisotopic_mass": 76670.0 }, "refseq": { "ac": "XP_020946107", "name": "maestro heat-like repeat-containing protein family member 6 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946107" }, "gene_names": [ { "name": "MROH6", "type": "recommended", "evidence": [ { 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], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MROH6", "url": "https://www.uniprot.org/uniprotkb/F1SEW4", "locus": { "chromosome": "4", "start_pos": 993815, "end_pos": 988185, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006948", "url": "https://www.ensembl.org/id/ENSSSCG00000006948" } ] } } ], "crossref": [ { "id": "F1SEW4", "url": "https://alphafold.ebi.ac.uk/entry/F1SEW4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006948", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006948", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100737318", "url": "https://www.ncbi.nlm.nih.gov/gene/100737318", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045206", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045206", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055406", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055406", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120:SF40", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120:SF40", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21047", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21047", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020946107", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020946107", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SEW4", "url": "https://www.uniprot.org/uniprotkb/F1SEW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEW4-1", "url": "https://www.uniprot.org/uniprotkb/F1SEW4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGGVWGWGRARGGPLGALTLTALAEGIRASRGQPLGPPDTGPEPEPELEPVVEPRRAACIPRAGSEPFPQPPAQEPAPEGPHQTARRSQEEGALEDLALYTAACLEEAGFAGTQATALTLSSALEARGERLEDQVHGLVRGLLAQVPSLAEGRPRRAALRVLSALALEHSWDVVCALLPSSLPPDRVAAELWRSLSRNQRVNGQVLVQLLWALKGLAGSQSEALAATRALGEMLAVSGCVGATRGFYPHLLLALVTQLHELARSTCPPDTPKAWAPSHPGPPHSHASCTVEALKALLTGDGSRMVVTCMEQAGGWRRLVGAHTHLEGVLLLASAMVAHADHHLRGLFADLLPRLRSAHDTQRLTAMAFFTGLLQSRPTARLLPEEVILERLCAWQGDPEPTVRWLGLLGLGHLALNRGKVRHVSTLLPALLGALAESDARLVGAALGALRRVLLRPRAPVRLLSAELGPRLPPLLDDARESVRASAVGLLGSLVRRGRGGLRVGLRGPLRKLVLQSLVPLLLRLSDPSRDTAESSEWTLARCDQALRWGLLEEVVTVAHYDSPEALSRICQRLVQWYPSHVPSFLSQTQGYLRSPQKPLRRAAAVLIGFLVHHSSPRCVNQDLLDSLFQDLGQLQSDPEPAVGAAAHVSTQQVALLAQAQHHLCRRCRPGLLRLPRLRRCHAHPARPRPVYGDSPFQPRSLAGRWDCSGLG", "length": 712, "header": "tr|F1SEW4-1|F1SEW4_PIG Isoform 1 of Maestro heat like repeat family member 6 OS=Sus scrofa OX=9823 GN=MROH6 PE=4 SV=5 CANONICAL=F1SEW4-1" }, "isoforms": [ { "isoform_ac": "F1SEW4-1", "url": "https://www.uniprot.org/uniprotkb/F1SEW4/entry#F1SEW4-1", "sequence": { "sequence": "MAGGVWGWGRARGGPLGALTLTALAEGIRASRGQPLGPPDTGPEPEPELEPVVEPRRAACIPRAGSEPFPQPPAQEPAPEGPHQTARRSQEEGALEDLALYTAACLEEAGFAGTQATALTLSSALEARGERLEDQVHGLVRGLLAQVPSLAEGRPRRAALRVLSALALEHSWDVVCALLPSSLPPDRVAAELWRSLSRNQRVNGQVLVQLLWALKGLAGSQSEALAATRALGEMLAVSGCVGATRGFYPHLLLALVTQLHELARSTCPPDTPKAWAPSHPGPPHSHASCTVEALKALLTGDGSRMVVTCMEQAGGWRRLVGAHTHLEGVLLLASAMVAHADHHLRGLFADLLPRLRSAHDTQRLTAMAFFTGLLQSRPTARLLPEEVILERLCAWQGDPEPTVRWLGLLGLGHLALNRGKVRHVSTLLPALLGALAESDARLVGAALGALRRVLLRPRAPVRLLSAELGPRLPPLLDDARESVRASAVGLLGSLVRRGRGGLRVGLRGPLRKLVLQSLVPLLLRLSDPSRDTAESSEWTLARCDQALRWGLLEEVVTVAHYDSPEALSRICQRLVQWYPSHVPSFLSQTQGYLRSPQKPLRRAAAVLIGFLVHHSSPRCVNQDLLDSLFQDLGQLQSDPEPAVGAAAHVSTQQVALLAQAQHHLCRRCRPGLLRLPRLRRCHAHPARPRPVYGDSPFQPRSLAGRWDCSGLG", "length": 712, "header": "tr|F1SEW4-1|F1SEW4_PIG Isoform 1 of Maestro heat like repeat family member 6 OS=Sus scrofa OX=9823 GN=MROH6 PE=4 SV=5 CANONICAL=F1SEW4-1" }, "locus": { "chromosome": "4", "start_pos": 992894, "end_pos": 988384, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007613.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007613.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007410.5", "url": "https://www.ensembl.org/id/ENSSSCP00000007410.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEW4", "url": "https://www.uniprot.org/uniprotkb/F1SEW4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SEW4", "url": "https://www.uniprot.org/uniprotkb/F1SEW4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SEW4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 712, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SEW4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SEW4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SEW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEW4" }, { "id": "PF21047", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21047" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Maestro-like HEAT-repeats", "eco_id": "ECO_0000259", "start_pos": 97, "end_pos": 207, "start_aa": "Asp", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SEW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEW4" }, { "id": "PF23227", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23227" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Maestro/Maestro-like HEAT-repeats", "eco_id": "ECO_0000259", "start_pos": 388, "end_pos": 654, "start_aa": "Ile", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEW6-1", "uniprot_ac": "F1SEW6", "uniprot_id": "F1SEW6_PIG", "mass": { "chemical_mass": 131005.0, "monoisotopic_mass": 131005.0 }, "refseq": {}, "gene_names": [ { "name": "SYDE2", "type": "recommended", "evidence": [ { "id": "F1SEW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEW6" } ] } ], "protein_names": [ { "name": "Synapse defective Rho GTPase homolog 2", "type": "synonym", "evidence": [ { "id": "F1SEW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEW6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SEW6", "url": "https://www.uniprot.org/uniprotkb/F1SEW6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SYDE2", "url": "https://www.uniprot.org/uniprotkb/F1SEW6", "locus": { "chromosome": "4", "start_pos": 130749734, "end_pos": 130702424, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006947", "url": "https://www.ensembl.org/id/ENSSSCG00000006947" } ] } } ], "crossref": [ { "id": "F1SEW6", "url": "https://alphafold.ebi.ac.uk/entry/F1SEW6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006947", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006947", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000198", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000198", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052118", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052118", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057459", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057459", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46150", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46150", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46150:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46150:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00620", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00620", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25336", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25336", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SEW6", "url": "https://www.uniprot.org/uniprotkb/F1SEW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEW6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEW6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHDLPPDSVARRSDRGWAGRRCPAGTRAPGQPPSPCGAAHRRACPQAGERGGGGRPWRQQVSPPRSPPRELGAGRPRTPRMWLSYSRSLDSLRVSAKPPPLQRWRSDSWIRCGACGDPDEPPPRGGAMHGWSGGGPRAAAPGRRSPSSPDPGRSSGSPFRDPAGSSVLHRGRDGPQGLPYLKPPAVTVRKLQKWMYKGRLLSLGMKGRTRRTPPEVPGVQAASPDLGALQVRESHVLSVPPDQRIRLTDLFENVYASSGERRELEELRGDSGFRRQEPLSSITVSKKRNWLYQSSPRPQDPRPQDRGRLPASPASPPQHQRSRPLLRAAEDSCTRGVCKAPNWSLSGTCSLDFSEGSDADDEGEIWYNPIPEDEDSAAPQSLSFGEAGSALLRPPAVPSRGLSGSDLKETEHPGDVSASDPADSVQTSQTTQSKEASPADSISCPECVQRCKQMCGPETQGGFAEEESAGARPLFAGPGILAAANETELGVSEPSSPSPSPVKKGSSVNWSFPDKIKSPRTVRKLSMKMKRLPELSRKLSVKGSLNYVPSPESPPSLSKWNCQEMGHAVIPPSGTTSTAAKRNVISRYHLDTSVSAQPSHRQESAVSPKSASKGGYLSDGDSPELIAKSSKHASENKFAKGKEVTPNTCSKNEIDIDAFRHYSFSDQPKCPQYISGLMSVHFYGAEDLKPPRMDSKDVFCAIQVDSVNKARTALLTCRTAFLDLDHTFNIEIENAQHLKLVVFSWEPTPRRNRVCCHGTVVLPSLFRVTKTHQLAVKLEPRGLIYVKVTLLEQWENSLHGLDVNREPVIFGVDIRKVVEKENIGLPVPLLIQKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSQAVGLCESQYPDINVITGVLKDYLRELPSPLITKQLYEAVLDAMAKNPLKMSSNGCENDPADSKDTVDLLDCLPDVEKATLMMLLDHLKLVASYQDVNKMTCQNLAVCFGPVLLSQRQETSSHNNRVFTDSEELATALDFKKHIEVLHYLLQLWPVQRLAIKESADSLFPEQTSSLNYLRRKKERPHLLNLRGTGPCRALRPRPTRLDSPLSNRYAGDWSSCGEDYLLNTKEALRNVDYDDIPTEDRENAENRSKMYDPDIMMQQPAPASEGCPFQTYLTMQTAGSTVDRTVNLRDLQESIDTLIGNLERELSKTKLAMSA", "length": 1190, "header": "tr|F1SEW6-1|F1SEW6_PIG Isoform 1 of Synapse defective Rho GTPase homolog 2 OS=Sus scrofa OX=9823 GN=SYDE2 PE=4 SV=4 CANONICAL=F1SEW6-1" }, "isoforms": [ { "isoform_ac": "F1SEW6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEW6/entry#F1SEW6-1", "sequence": { "sequence": "MHDLPPDSVARRSDRGWAGRRCPAGTRAPGQPPSPCGAAHRRACPQAGERGGGGRPWRQQVSPPRSPPRELGAGRPRTPRMWLSYSRSLDSLRVSAKPPPLQRWRSDSWIRCGACGDPDEPPPRGGAMHGWSGGGPRAAAPGRRSPSSPDPGRSSGSPFRDPAGSSVLHRGRDGPQGLPYLKPPAVTVRKLQKWMYKGRLLSLGMKGRTRRTPPEVPGVQAASPDLGALQVRESHVLSVPPDQRIRLTDLFENVYASSGERRELEELRGDSGFRRQEPLSSITVSKKRNWLYQSSPRPQDPRPQDRGRLPASPASPPQHQRSRPLLRAAEDSCTRGVCKAPNWSLSGTCSLDFSEGSDADDEGEIWYNPIPEDEDSAAPQSLSFGEAGSALLRPPAVPSRGLSGSDLKETEHPGDVSASDPADSVQTSQTTQSKEASPADSISCPECVQRCKQMCGPETQGGFAEEESAGARPLFAGPGILAAANETELGVSEPSSPSPSPVKKGSSVNWSFPDKIKSPRTVRKLSMKMKRLPELSRKLSVKGSLNYVPSPESPPSLSKWNCQEMGHAVIPPSGTTSTAAKRNVISRYHLDTSVSAQPSHRQESAVSPKSASKGGYLSDGDSPELIAKSSKHASENKFAKGKEVTPNTCSKNEIDIDAFRHYSFSDQPKCPQYISGLMSVHFYGAEDLKPPRMDSKDVFCAIQVDSVNKARTALLTCRTAFLDLDHTFNIEIENAQHLKLVVFSWEPTPRRNRVCCHGTVVLPSLFRVTKTHQLAVKLEPRGLIYVKVTLLEQWENSLHGLDVNREPVIFGVDIRKVVEKENIGLPVPLLIQKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSQAVGLCESQYPDINVITGVLKDYLRELPSPLITKQLYEAVLDAMAKNPLKMSSNGCENDPADSKDTVDLLDCLPDVEKATLMMLLDHLKLVASYQDVNKMTCQNLAVCFGPVLLSQRQETSSHNNRVFTDSEELATALDFKKHIEVLHYLLQLWPVQRLAIKESADSLFPEQTSSLNYLRRKKERPHLLNLRGTGPCRALRPRPTRLDSPLSNRYAGDWSSCGEDYLLNTKEALRNVDYDDIPTEDRENAENRSKMYDPDIMMQQPAPASEGCPFQTYLTMQTAGSTVDRTVNLRDLQESIDTLIGNLERELSKTKLAMSA", "length": 1190, "header": "tr|F1SEW6-1|F1SEW6_PIG Isoform 1 of Synapse defective Rho GTPase homolog 2 OS=Sus scrofa OX=9823 GN=SYDE2 PE=4 SV=4 CANONICAL=F1SEW6-1" }, "locus": { "chromosome": "4", "start_pos": 130747856, "end_pos": 130702424, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007611.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007611.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007408.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007408.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 187, "start_aa": "Thr", "end_pos": 187, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr187", "evidence": [ { "id": "GLY_001152", 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"rRNA catabolic process", "id": "GO:0016075", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016075", "evidence": [ { "database": "UniProtKB", "id": "F1SEX4", "url": "https://www.uniprot.org/uniprotkb/F1SEX4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 114 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { 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"database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12937", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12937", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8951664", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-983168", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003123365", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123365", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SEX6", "url": "https://www.uniprot.org/uniprotkb/F1SEX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEX6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEX6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELPPGPRDDPCAWDDDSDLELEPDPDAQAEAYVARVLSPPKLGLAPPRTPPLPAPAVSLGALEPRAASKGPAVAVPGLLSLPPELLLEICAYLDARLVLHVLPLVCHTLRDLVRDHVTWRLRAQRRVRAPYPVVEGEDFDWPAACIELEQHLSRWAEDGRWAEYFCLADGHFASIDSVLLIQGGTLCLSGSRDRNVNLWDLRQLGVEPSRVLVKALGSQKNSTHKGWVWSLAALDHRVCSGSWDSTVKLWDMAADGQQFGEIKGKAAVLCLSYRPDILVTGTYDKKVTIYDPRVGPALLKSRRLHSSAVLALLADDRHIISGSEDHTLVVFDRRANSVLQRLQLDSYLLCMSYQEPQLWAGDNQGLLHVFANRHGCFQLVRSFDVGHRSQITGIKHSLGALYTTSTDKTIRVHVPTDPPRTICTRSHHNVLNGICAEGNLVVAASGGLSLEVWRLQA", "length": 458, "header": "tr|F1SEX6-1|F1SEX6_PIG Isoform 1 of F-box/WD repeat-containing protein 9 OS=Sus scrofa OX=9823 GN=FBXW9 PE=4 SV=2 CANONICAL=F1SEX6-1" }, "isoforms": [ { "isoform_ac": "F1SEX6-1", "url": "https://www.uniprot.org/uniprotkb/F1SEX6/entry#F1SEX6-1", "sequence": { "sequence": 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"glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEX6", "url": "https://www.uniprot.org/uniprotkb/F1SEX6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519242", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519242", "resource": "KEGG Pathway" }, { "id": "R-SSC-8951664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "resource": "Reactome", "description": "Neddylation" }, { "id": "R-SSC-983168", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-983168", "resource": "Reactome", "description": "Antigen processing: Ubiquitination & Proteasome degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AB32TN93-1", "protein_name": "F-box/WD repeat-containing protein 9 isoform X1", "gene_name": "fbxw9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPASIDLPVVQLMSQLNVALEDEQKERRSAVSDPPDCLPDSLHCEPSVIATDTSPSPSSNGVNLLSLPWEIVTQIASHLPAQCVINVLPKVCQTLGKVGEDRLAWQLRTQKLCGPAASFPVGPKQDFDWSRACLEMEELIGHWKGQGTPTEKQEMVEDRQEVAAEAVNGEAPAAEANMVQMQLDVDLNAQIQSQNASSSTSSPLEHMVLPSGHIADVNCVLLLGGAGAVCASGSRDRNVNLWDLNEGPRGALMHTLGGRGTISTHRGWVWCLASSGPLLASGSFDSMVKLWDLQAGGAERGLIQCKAAVLCLSCERDTVLAGSHDQRLSIYDTRAANPLVKSLRLHSDAVLCLAADDQFILSGSKDQSVALFDRRAGKLLQKVQLSSYLLSVSFSGSEVWAGDNRGLLHTFSMSSSCLTPVQQFKTHTSLVTGVHYTPGALYTCSSDRSIKIHLPSAPPKTLCTLHHQAGVNGLSVKGGTLAIASGDMNVEVWRPRC", "length": 497 }, "evidence": [ { "id": "F1SEX6", "url": "https://omabrowser.org/oma/group/F1SEX6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1MAM1-1", "protein_name": "F-box/WD repeat-containing protein 9", "gene_name": "Fbxw9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELPSGQCGNPRSCEDESDPEPEPDPDAQAEAYVARVLTPPKPGMTPRRSSLQSMFSASLGMPERKDASKVPAVSLPGLLSLPPELLLEICAYLDARVVLHVLPCVCQALHNLVRDRVTWRLRAQRRVRSPYPVVEEENFDWPAACIELEQHLARWAEDGQRTEYFCLADGHFASIDAVLLLQGGTLCLSGSRDRNVNLWDLRHLGKEPSRVLVKALGTQGNSTHKGWVWSLAAQDHRVCSGSWDSTVKLWDMAADGQQFGEIKGKAAVLCLSYQPDILVTGTYDKKVTIYDPRAGLTLVKSRRLHSSAVLAVLADDRHIISGSEDHSLVVFDRRANSVLQRLQLDSYLLCMSYQEPQLWAGDNQGLLHVFANQDGCFQLVRTFDVGHQSQITGIKHSLGTLYTTSTDKTIRVHVPTDPPKTICTRRHHNVLNGICAEGNIVVAASGGLSLEVWRLLA", "length": 458 }, "evidence": [ { "id": "F1SEX6", "url": "https://omabrowser.org/oma/group/F1SEX6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MD71-1", "protein_name": "F-box/WD repeat-containing protein 9", "gene_name": "FBXW9", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MELPPGPRDDPHAWDDDSDPELEPDPDAQAEAYVARVLSPPKLGLAPPRAPPLPAPTVSFGSLEPRAASKGPTVAVPGLLSLPPELLLEICAYLDARLVLHVLPRVCHALRDLVRDRVTWRLRAQRRVRAPYPVVEEEDFDWPTACIELEQHLSRWADDGRRAEYFCLADGHFASIDSVLLLQGGTLCLSGSRDRNVNLWDLQQLGVEPSRVLVKTLGTQKNSTHKGWVWSLAALDHRVCSGSWDSTVKLWDMAADGQQFGEIKGKAAVLCLSYRPDILVTGTYDKKVTVYDPRVGPALLKSRRLHSSAVLALLADDRHIISGSEDHTLVVFDRRANSVLQRLQLDSYLLCMSYQEPQLWAGDNQGLLHVFANRSGCFQLVRSFDVGHRSQITGIKHSLGALYTTSTDKTIRVHVPTDPPRTICTRSHHNVLNGICAEGNLVVAASGGLSLEVWRLQA", "length": 458 }, "evidence": [ { "id": "F1SEX6", "url": "https://omabrowser.org/oma/group/F1SEX6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F8VPX2-1", "protein_name": "F-box/WD repeat-containing protein 9", "gene_name": "Fbxw9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLSSGRSGDPRSCEEESDPEPDPDPDTQAEAYVARVLTPPKLGLTPRRSSLQSMFSASLGVPERKAASKVPAVRLPGLLSLPPELLLEICAYLDARVVLQVLPCVCQALHDLVRDRVTWRLRAQRRVRAPYPVVEEENFDWPAACIELEQHLARWAEDGQRTEYFCLADGHFASIDAVLLLQGGALCLSGSRDRNVNLWDLRHLGKDPSRVLVKALGTQGNSTHKGWVWSLAAQDHRVCSGSWDSTVKLWDMAADGQQFGEIKGKAAVLCLSYQPDILVTGTYDKKVTIYDPRAGLALVKSRRLHSSAVLAVLADDRHVISGSEDHSLVVFDRRANSVLQRLQLDSYLLCMSYQEPQLWAGDNQGLLHVFANRDGCFQLVRSFDVGHQSQITGIKHSLGTLYTTSTDKTIRVHVPTDPPRTICTRSHHNVLNGICAEGNVVVAASGGLSLEVWRLLA", "length": 458 }, "evidence": [ { "id": "F1SEX6", "url": "https://omabrowser.org/oma/group/F1SEX6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3HCV9-1", "protein_name": "F-box/WD repeat-containing protein 9", "gene_name": "Fbxw9", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MELPSGRCEDPRSCDDESDPEPDPDPDVQAEAYVARVLTPPKPGLTPRRSSLQSTLSASLDAPERKAVSRVPPVRLPGLLSLPPELLLEICAYLDARVVLHVLPCVCQALHDLVRDHVTWRLRAQRRVRAPYPVVEEEDFDWPTACIELEQHLARWAEDGQRAEYFCLADGHFASIDAVLLLQGGALCLSGSRDRNVNLWDLRHLGKEPSRVLVKALGTQGNSTHQGWVWSLAAQDHRVCSGSWDSTVKLWDMQADGQQFGEIKGKAAVLCLSYQPDILVTGTYDKKVTIYDPRADLALVKSRRLHSSAVLAVLADDRHIISGSEDHSLVVFDRRANSVLQRLQLDSYLLCMSYQEPQLWAGDNQGLLHVFANRDGCFQLVRSFDVGHQSQITGIKHSLGTLYTTSTDKTIRVHVPTDPPRTICTRSHHNVLNGICAEGNVVVAASGGLSLEVWRLLA", "length": 458 }, "evidence": [ { "id": "F1SEX6", "url": "https://omabrowser.org/oma/group/F1SEX6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5XUX1-3", "protein_name": "F-box/WD repeat-containing protein 9", "gene_name": "FBXW9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MELPLGRCDDSRTWDDDSDPESETDPDAQAKAYVARVLSPPKSGLAFSRPSQLSTPAASPSASEPRAASRVSAVSEPGLLSLPPELLLEICSYLDARLVLHVLSRVCHALRDLVSDHVTWRLRALRRVRAPYPVVEEKNFDWPAACIALEQHLSRWAEDGRWVEYFCLAEGHVASVDSVLLLQGGSLCLSGSRDRNVNLWDLRQLGTESNQVLIKTLGTKRNSTHEGWVWSLAAQDHRVCSGSWDSTVKLWDMAADGQQFGEIKASSAVLCLSYLPDILVTGTYDKKVTIYDPRAGPALLKHQQLHSRPVLTLLADDRHIISGSEDHTLVVVDRRANSVLQRLQLDSYLLCMSYQEPQLWAGDNQGLLHVFANRNGCFQLIRSFDVGHSFPITGIQYSVGALYTTSTDKTIRVHVPTDPPRTICTRRHDNGLNRVCAEGNLVVAGSGDLSLEVWRLQA", "length": 458 }, "evidence": [ { "id": "F1SEX6", "url": "https://omabrowser.org/oma/group/F1SEX6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 222, "end_pos": 224, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SEX6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEX6" }, { "id": "PS50181", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50181" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000259", "start_pos": 76, "end_pos": 123, "start_aa": "Val", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 222, "end_pos": 224 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEX8-1", "uniprot_ac": "F1SEX8", "uniprot_id": "F1SEX8_PIG", "mass": { "chemical_mass": 40831.0, "monoisotopic_mass": 40831.0 }, "refseq": { "ac": "XP_003123366", "name": "deoxyhypusine synthase isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123366" }, "gene_names": [ { "name": "DHPS", "type": "recommended", "evidence": [ { "id": "F1SEX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ] }, { "name": "DHPS", "type": "synonym", "evidence": [ { "id": "XP_003123366", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123366" } ] } ], "protein_names": [ { "name": "Deoxyhypusine synthase", "type": "recommended", "evidence": [ { "id": "F1SEX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEX8/entry#names_and_taxonomy" } ] }, { "name": "2.5.1.46", "type": "synonym", "evidence": [ { "id": "F1SEX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEX8/entry#names_and_taxonomy" } ] }, { "name": "deoxyhypusine synthase isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003123366", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123366" } ] } ], "function": [ { "annotation": "Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a critical lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue. This is the first step of the post-translational modification of that lysine into an unusual amino acid residue named hypusine. Hypusination is unique to mature eIF-5A factor and is essential for its function.", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8#function" }, { "database": "UniProtKB", "id": "ARBA00056884", "url": "https://www.uniprot.org/uniprotkb/ARBA00056884#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DHPS", "url": "https://www.uniprot.org/uniprotkb/F1SEX8", "locus": { "chromosome": "2", "start_pos": 66307769, "end_pos": 66303370, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013723", "url": "https://www.ensembl.org/id/ENSSSCG00000013723" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013723", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013723", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519413", "url": "https://www.ncbi.nlm.nih.gov/gene/100519413", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002773", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002773", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029035", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029035", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036982", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036982", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519413", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519413", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HSIINAN", "url": "https://omabrowser.org/oma/group/HSIINAN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SEX8", "url": "https://www.orthodb.org/?gene=F1SEX8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11703", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11703", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11703:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11703:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01916", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01916", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-204626", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204626", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003123366", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123366", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "33299", "url": "https://www.rhea-db.org/rhea/33299", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1UG54", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UG54", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UG54-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UG54-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEX8-1", "url": "https://www.uniprot.org/uniprotkb/F1SEX8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGLPEREAPAAALAAVLKHSSALPSESAQVRGYDFNRGVDYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLTQSRRPLTGCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNDNYCKFEDWLMPILDQMVLEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVLSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKRSGMIILGGGMVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRMDAQPVKVYADASLVFPLLVAETFAQKANAFMPEKNED", "length": 369, "header": "tr|F1SEX8-1|F1SEX8_PIG Isoform 1 of Deoxyhypusine synthase OS=Sus scrofa OX=9823 GN=DHPS PE=1 SV=1 CANONICAL=F1SEX8-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UG54-1", "url": "https://www.uniprot.org/uniprotkb/F1SEX8/entry#A0A4X1UG54-1", "sequence": { "sequence": "MEGLPEREAPAAALAAVLKHSSALPSESAQVRGYDFNRGVDYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLTQSRRPLTGCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNDNYCKFEDWLMPILDQMVLEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVLSPALTDGSLGDMIFFHSYKNPGLVLDIVEAQEFDGSDSGARPDEAVSWGKIRMDAQPVKVYADASLVFPLLVAETFAQKANAFMPEKNED", "length": 322, "header": "tr|A0A4X1UG54-1|A0A4X1UG54_PIG Computationally mapped isoform of Deoxyhypusine synthase OS=Sus scrofa OX=9823 GN=DHPS PE=1 SV=1 CANONICAL=F1SEX8-1" }, "locus": { "chromosome": "2", "start_pos": 66307640, "end_pos": 66303558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048222.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048222.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057434.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057434.2" } ] } }, { "isoform_ac": "F1SEX8-1", "url": "https://www.uniprot.org/uniprotkb/F1SEX8/entry#F1SEX8-1", "sequence": { "sequence": "MEGLPEREAPAAALAAVLKHSSALPSESAQVRGYDFNRGVDYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLTQSRRPLTGCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNDNYCKFEDWLMPILDQMVLEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVLSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKRSGMIILGGGMVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRMDAQPVKVYADASLVFPLLVAETFAQKANAFMPEKNED", "length": 369, "header": "tr|F1SEX8-1|F1SEX8_PIG Isoform 1 of Deoxyhypusine synthase OS=Sus scrofa OX=9823 GN=DHPS PE=1 SV=1 CANONICAL=F1SEX8-1" }, "locus": { "chromosome": "2", "start_pos": 66307640, "end_pos": 66303558, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014997.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014997.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014593.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014593.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519413", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519413", "resource": "KEGG Pathway" }, { "id": "R-SSC-204626", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204626", "resource": "Reactome", "description": "Hypusine synthesis from eIF5A-lysine" } ], "orthologs": [ { "uniprot_canonical_ac": "G3HCV7-1", "protein_name": "Deoxyhypusine synthase", "gene_name": "Dhps", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGTPQGVAPAAALAAVLKHSSALPPESAQVQGYDFNRGVDYHALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLALGEDHHEDLTKSRRPLTGCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLSGKELRENGINRIGNLLVPNDNYCKFEDWLMPILDQMVLEQNTEGVKWTPSKMISRLGKEINNPESVYYWAHKNHIPVLSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINMQAIFAKRSGMIILGGGMVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRMDAQPVKVYADASLVFPLLVAKTFAQKADAFTAEKNED", "length": 369 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P38791-1", "protein_name": "Deoxyhypusine synthase", "gene_name": "DYS1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSDINEKLPELLQDAVLKASVPIPDDFVKVQGIDYSKPEATNMRATDLIEAMKTMGFQASSVGTACEIIDSMRSWRGKHIDELDDHEKKGCFDEEGYQKTTIFMGYTSNLISSGVRETLRYLVQHKMVDAVVTSAGGVEEDLIKCLAPTYLGEFALKGKSLRDQGMNRIGNLLVPNDNYCKFEEWIVPILDKMLEEQDEYVKKHGADCLEANQDVDSPIWTPSKMIDRFGKEINDESSVLYWAHKNKIPIFCPSLTDGSIGDMLFFHTFKASPKQLRVDIVGDIRKINSMSMAAYRAGMIILGGGLIKHHIANACLMRNGADYAVYINTGQEYDGSDAGARPDEAVSWGKIKAEAKSVKLFADVTTVLPLIVAATFASGKPIKKVKN", "length": 387 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P49366-1", "protein_name": "Deoxyhypusine synthase", "gene_name": "DHPS", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEGSLEREAPAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMHEKNED", "length": 369 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q3TXU5-1", "protein_name": "Deoxyhypusine synthase", "gene_name": "Dhps", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEGTPPGAAPSSALAAVLKHSSALPPESAQVQGYDFNRGVDYHALLDAYRTTGFQATNFGRAVQQVNAMIEKKLEPLAVDEDHHADLTQSRRPLTGCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRESGINRIGNLLVPNDNYCKFEDWLMPILDQMVLEQNTEGVKWTPSKMISRLGKEINNPDSVYYWAHKNHIPVLSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKRSGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRMDAQPVKVYADASLVFPLLVAETFAQKADAFRAEKNED", "length": 369 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54MQ7-1", "protein_name": "Probable deoxyhypusine synthase", "gene_name": "dhps", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSTNTTTTNATPELAKESVFFQSNHEDLKNRPKVRGYDFNEGVDFSKLFETYKTIGYQASAVGEAIDEINRMISWRLVDEPLKEGEDDDEERKVTRCKIFLGYTSNLVSSGVREIIRYLVQHSMVDVIVSTAGGVEEDFIKCLAPTYMGEFHLEGEKLRRKGLNRIGNLLVPNDNYCKFEDWIMPILDQMVEEQKTKGTVWTPSRVINRLGKEINHEDSIYYWAWKNDIPVYSPALTDGSIGDMMYFHSYNTPGLVLDIISDIRAINNHAVYSKKSGMIILGGGVIKHHICNANLFRNGADYSVFVNTGNEFDGSDSGARPDEAVSWGKIKLDAKPVKVYSEASIVFPILVAETFAKTFKKKSPEELKLNKRSIFD", "length": 376 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q6AY53-1", "protein_name": "Deoxyhypusine synthase", "gene_name": "Dhps", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGTPSGAAPSSALAAVLKHSSALPPESAQVQGYDFNRGVDYHALLEAYGTTGFQATNFGRAVQQVNAMIEKKLEPLAVDEDHHEDLTQSRRPLTGCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNDNYCKFEDWLMPILDQMVQEQNTEGVKWTPSKMISRLGKEINNPESVYYWAHKNHIPVLSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINMQAIFAKRTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRMDAQPVKVYADASLVFPLLVAETFAQKADAFRAEKNED", "length": 369 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EWQ6-1", "protein_name": "Deoxyhypusine synthase", "gene_name": "DHPS", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEGPQEREVPAAALAAVLKHSSALPFETAQVRGYDFNRGVDYRALLEAFSTTGFQATNFGRAVQQVNAMIEKKLEPLSEDEDQHADLTQSRRPLTGCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDFIKCLAPTYLGEFSLRGKELRENGINRIGNLLVPNDNYCKFEDWLMPILDQMVLEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVLSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLKLINTQAIFAKRTGMIILGGGMVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARPDEAVSWGKIRMDAQPVKVYADASLVFPLLVAETFAQKVDAFMPEKNED", "length": 369 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9FI94-1", "protein_name": "Deoxyhypusine synthase", "gene_name": "DHS", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEDDRVFSSVHSTVFKESESLEGKCDKIEGYDFNQGVDYPKLMRSMLTTGFQASNLGEAIDVVNQMLDWRLADETTVAEDCSEEEKNPSFRESVKCKIFLGFTSNLVSSGVRDTIRYLVQHHMVDVIVTTTGGVEEDLIKCLAPTFKGDFSLPGAYLRSKGLNRIGNLLVPNDNYCKFEDWIIPIFDEMLKEQKEENVLWTPSKLLARLGKEINNESSYLYWAYKMNIPVFCPGLTDGSLGDMLYFHSFRTSGLIIDVVQDIRAMNGEAVHANPKKTGMIILGGGLPKHHICNANMMRNGADYAVFINTGQEFDGSDSGARPDEAVSWGKIRGSAKTVKVYCDATIAFPLLVAETFATKRDQTCESKT", "length": 368 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VSF4-1", "protein_name": "Probable deoxyhypusine synthase", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSTEPSVAKDAVLKRSEALAENTPQVSGYDFNEGLDYSKLFESYVNTGFQATNLGLAIREINRMLDCRDQPLEADQIDSHETDDFIRRRSKCTVFLGYTSNLVSSGLRETIRFLAEHRMIDCIVTTAGGVEEDFIKCLAPTFMGSFELSGRDLRERGINRIGNLLVPNDNYCKFEDWVMPLLDEMLEEQKSQGTIWSPSKIIHRLGERIGDPSSIYYWAAKNQIPVFCPALTDGSLGDMMYFHSFRQPGLVVDILSDLRRLNTMAVKAVNSGMIIVGGGVIKHHICNANLMRNGADYSVFINTASEFDGSDSGARPDEAISWGKIRKDATPVKVYAEASLVFPLIVGETFAKRHHCAGKELPRETNQV", "length": 368 }, "evidence": [ { "id": "F1SEX8", "url": "https://omabrowser.org/oma/group/F1SEX8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "spermidine metabolic process", "id": "GO:0008216", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008216", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "pmid": "" }, { "name": "protein maturation", "id": "GO:0051604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051604", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "deoxyhypusine synthase activity", "id": "GO:0034038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034038", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SEX8", "url": "https://www.uniprot.org/uniprotkb/F1SEX8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "33299", "name": "", "equation": "[eIF5A protein]-L-lysine + spermidine = [eIF5A protein]-deoxyhypusine + propane-1,3-diamine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "33299", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/33299" } ] }, { "id": "R-SSC-204617", "name": "DHPS tetramer synthesizes EIF5A and spermidine from Dhp-K50-EIF5A", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-204628" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-204617", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204617" } ] }, { "id": "R-SSC-204647", "name": "DHPS tetramer synthesizes Dhp-K50-EIF5A from EIF5A and spermidine", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-204647", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-204647" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-204628", "participant_name": "1,3-diaminopropane [cytosol]", "crossref": [ { "id": "15725", "database": "ChEBI", "url": "" }, { "id": "C00986", "database": "COMPOUND", "url": "" }, { "id": "ZINC000005828682", "database": "ZINC", "url": "" }, { "id": "HMDB0000002", "database": "HMDB Metabolite", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SEY5-1", "uniprot_ac": "F1SEY5", "uniprot_id": "F1SEY5_PIG", "mass": { "chemical_mass": 75708.0, "monoisotopic_mass": 75708.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "C2H2-type domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1SEY5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SEY5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SEY5", "url": "https://www.uniprot.org/uniprotkb/F1SEY5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/F1SEY5", "locus": {} } ], "crossref": [ { "id": "F1SEY5", "url": "https://alphafold.ebi.ac.uk/entry/F1SEY5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000036608", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000036608", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050826", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050826", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24377", "url": 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"https://www.uniprot.org/uniprotkb/A0A8W4FI76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI76-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI76-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEY5", "url": "https://www.uniprot.org/uniprotkb/F1SEY5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SEY5-1", "url": "https://www.uniprot.org/uniprotkb/F1SEY5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"id": "NRRWNSR", "url": "https://omabrowser.org/oma/group/NRRWNSR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR34759", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34759", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34759:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34759:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15073", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15073", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SF27", "url": "https://www.uniprot.org/uniprotkb/F1SF27", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SF27-1", "url": "https://www.uniprot.org/uniprotkb/F1SF27-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDMDSQHTPGKISISEGSFLSRARAVENVDYPHHRDLLRKLNMPFVKGVEDRHDYGRIEKKCNPAFLKFHPYPPSALPDYHLHYPYPPPYGPDYPLFPLRDDVPLGDSCSGFLSPGGDADLKPGVGRAIPSLVDFSDVKPQHQVPRPDTGFQTTLKRKNLLFEELKQDRRWNSRAVPDVSIRARLGGWTSPVKVTPLRTHHEEYSTHHPYTFDEEATSTDDGDTLVQPNKKYSAKDSFYKSSTQKAYEAVPWDKMLPPKVDPEETTVERAADPISQCFTLKRYERLPAITQMVGGLWDRFQTRSFLAPVKPVNFVSPSSRSKYLPLYTGCVQSTNAEDIDNPHGDTASLAGARSSEVLSANTSRSANIPGYTGKVHFTATHPANSNIPSTTPSPDSEVHRVLGKEMAVDVFRHQGPLSQMVTTVKPHNPFEKKEKETVGS", "length": 440, "header": "tr|F1SF27-1|F1SF27_PIG Isoform 1 of Sperm microtubule inner protein 7 OS=Sus scrofa OX=9823 GN=SPMIP7 PE=4 SV=3 CANONICAL=F1SF27-1" }, "isoforms": [ { "isoform_ac": "F1SF27-1", "url": "https://www.uniprot.org/uniprotkb/F1SF27/entry#F1SF27-1", "sequence": { "sequence": "MDMDSQHTPGKISISEGSFLSRARAVENVDYPHHRDLLRKLNMPFVKGVEDRHDYGRIEKKCNPAFLKFHPYPPSALPDYHLHYPYPPPYGPDYPLFPLRDDVPLGDSCSGFLSPGGDADLKPGVGRAIPSLVDFSDVKPQHQVPRPDTGFQTTLKRKNLLFEELKQDRRWNSRAVPDVSIRARLGGWTSPVKVTPLRTHHEEYSTHHPYTFDEEATSTDDGDTLVQPNKKYSAKDSFYKSSTQKAYEAVPWDKMLPPKVDPEETTVERAADPISQCFTLKRYERLPAITQMVGGLWDRFQTRSFLAPVKPVNFVSPSSRSKYLPLYTGCVQSTNAEDIDNPHGDTASLAGARSSEVLSANTSRSANIPGYTGKVHFTATHPANSNIPSTTPSPDSEVHRVLGKEMAVDVFRHQGPLSQMVTTVKPHNPFEKKEKETVGS", "length": 440, "header": "tr|F1SF27-1|F1SF27_PIG Isoform 1 of Sperm microtubule inner protein 7 OS=Sus scrofa OX=9823 GN=SPMIP7 PE=4 SV=3 CANONICAL=F1SF27-1" }, "locus": { "chromosome": "9", "start_pos": 136235905, "end_pos": 136189855, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017022.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017022.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016567.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016567.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SF27", "url": "https://www.uniprot.org/uniprotkb/F1SF27" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A2R8RM10-1", "protein_name": "Protein SPMIP7 isoform X1", "gene_name": "spmip7", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKIYSIHFLIVCFYESLMGEKGETYRVRLLKAPCGNSKEVSRWLCRRMNLPCEKGPEGRYDFESMAETDRRAFSKFNPAAKQPAENAALAPLRDGVSLIDHCSGQLSTGAQVHLEVTSRTPFVNRVYPTSDLWVPAGARDRPQTPPTRPSALIYDNSEHKRWNSRMRPEAALKAKLEGWTNAQSIKQPSQDSHEINADPDPSVLFDSKATAAQQYIYTSATQRGYEDVAWDSKLPPRHEPPISSLEKMADPVSQCFVLKRYHSRPELWQAIGSHWSKHQLRGTFNPKKPISFTSSCPKSGHIPLYCGTVGSENMDNVNIPEEDFTPLTVLRSKVPPHTLTSYRTTIPGYTGKARFDRAQTSEASLPSLLCTPQTAGSLPGTWNSSFYGRKAPLSSMITTVPPGNPYLHSKAPVLSMK", "length": 417 }, "evidence": [ { "id": "F1SF27", "url": "https://omabrowser.org/oma/group/F1SF27/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8C2QDG2-1", "protein_name": "Spermatogenesis-associated protein 48", "gene_name": "Spata48", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKNYMDMEVKNKPGKISIPERFIFSGAKAVENPDYPHYCDLLRKMNMPFVKGPEDRHNCSRFEKKCSSAFLKFHPYPPSVLPDYHFHYPYPPPYGPEYALFPLRDDTSLADPCSGFMSAGADADLKPGIGRTIPNLVSYNDVKPQNRVPRPDKGFQTPIKRQTVLLEELQTSRKWNSREVPDISIRAKLGGWTSPHKVIPIPPNDHKRSSLSRILTFDDEATNTDDNEPLVQPGKKYNMKDSFYKSSTQKAYEAVPWDKMLQPKLDPEETTLEKAADNISHCFTLKRYERVPAISQMVGGLWDRFQTRLFSVPAKPISFVSPSSRSKYIPRYTGHVQSTNADDVDNPFGNITSVAEPRHSKLLYTNTSCAANIPGYTGKVHFTATHPTNSNIPSTTPSPDSEMSRFLRQSMEDDRFRHQAPLSRMVTTVRPYNPFNRKEKETIDY", "length": 445 }, "evidence": [ { "id": "F1SF27", "url": "https://omabrowser.org/oma/group/F1SF27/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0X5T2-1", "protein_name": "Sperm microtubule inner protein 7", "gene_name": "C7orf72", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTMVSHGAKRRAAMSVEPIHRMHHQQYQNLLKKMCMPFIRGPENRHDFASFEEKDSNSFLKFHPDTPPFGPNYPLFPHRDDVPLVDPCSGFVSVGGDAELQPGVGKVIESLVDYSDVKPHQRVPTAGKGARTAHRRHMILLEETSQDRRWNSRAVPAALIRAKLRGQTTSVKGFRAPLDQHHNFAFCMDPNLKESNDPSASWREEKAKDYFYKSSTQKAYEEVPWDNILPSKIQPPESTVEVMADPVSQCFTKRRYNPEPEISQVIGNLWDRFQRRYFTSSQRPVNFVSRSSRICQIPLYTGCVGAVNFEDIDNPSVDLIIFNHVQTSKPRYTRTAHTPNIPGYTGKVHWLATHPANSNLPSTSPSIISQMHGYIAKYGRSSQYNHQGPFSQMMTPVSPQNPFNKIQKGQSLLPA", "length": 415 }, "evidence": [ { "id": "F1SF27", "url": "https://omabrowser.org/oma/group/F1SF27/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A4D263-1", "protein_name": "Protein SPMIP7", "gene_name": "SPMIP7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVEIQDTPGKISISKRSILSGTVENIDYPHYCDLLRKMNMPFVKGLENRHNYGRFEKKCNPAFLKFHPYPPSVLPDYHLHDPYPPPYGPHYPLFPLRDDVTLGDSCSGFMSPGGDADLNPGIGRTIPTLVDFSDVKPQHRVPRPDTGFQTTIKRQKILSEELQQNRRWNSREVPDISIRARLGGWTSPLKVTPLQPHHEGRSLSHIFTFDEEATCTDEGEPLVQTNKKCNAKDSFYKSSTQKAYEDVPWDKMLPPKLVPEETTLEKTADPISQCFTLKRYKGVPAITQMVGELWDRFQTRSFLAPVKPINFVSSSSRSKYIPLYTGHVQSTNADDVDNPLGDIASLAKQRYSKPLYTNTSRAANIPGYTGKVHFTATHPANSNIPSTTPSPDSELHRVFQKEMAVDLFRHQAPLSRLVTTVRPYNPFNKKDKETIDY", "length": 438 }, "evidence": [ { "id": "F1SF27", "url": "https://omabrowser.org/oma/group/F1SF27/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D4A9H9-1", "protein_name": "Sperm microtubule inner protein 7", "gene_name": "Spmip7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/F1SF44-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAQLLAQEPDRVRRRKISEKGRGSQAGSVLAPLEASTLEAMGRKEDEDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESSTHYYLVMQLVSGGELFDRILERGVYTERDASLVIRQVLAAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQSGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPKERYTCEKALRHPWINGNTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHHMRKLHMNLHSPGGRPEVENRPPVTRASDASRPSTPEITITEAPALDQSVALPALPRLPCQHGPRPTAPGGRSLNCLVNGSLRISSSLVPMEQGRLATGPCGCCSSCLSVETKGKSSYCSEPTLLKRPKNKTSNQRSWCQGKRGAAPTAEWGRLESV", "length": 513, "header": "tr|F1SF44-1|F1SF44_PIG Isoform 1 of Calcium/calmodulin-dependent protein kinase type 1G OS=Sus scrofa OX=9823 GN=CAMK1G PE=3 SV=3 CANONICAL=F1SF44-1" }, "isoforms": [ { "isoform_ac": "F1SF44-1", "url": "https://www.uniprot.org/uniprotkb/F1SF44/entry#F1SF44-1", "sequence": { "sequence": "MAAQLLAQEPDRVRRRKISEKGRGSQAGSVLAPLEASTLEAMGRKEDEDCSSWKKQTTNIRKTFIFMEVLGSGAFSEVFLVKQRVTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESSTHYYLVMQLVSGGELFDRILERGVYTERDASLVIRQVLAAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQSGVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPKERYTCEKALRHPWINGNTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHHMRKLHMNLHSPGGRPEVENRPPVTRASDASRPSTPEITITEAPALDQSVALPALPRLPCQHGPRPTAPGGRSLNCLVNGSLRISSSLVPMEQGRLATGPCGCCSSCLSVETKGKSSYCSEPTLLKRPKNKTSNQRSWCQGKRGAAPTAEWGRLESV", "length": 513, "header": "tr|F1SF44-1|F1SF44_PIG Isoform 1 of Calcium/calmodulin-dependent protein kinase type 1G OS=Sus scrofa OX=9823 GN=CAMK1G PE=3 SV=3 CANONICAL=F1SF44-1" }, "locus": { "chromosome": "9", "start_pos": 133378765, "end_pos": 133352564, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017013.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017013.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016559.4", "url": "https://www.ensembl.org/id/ENSSSCP00000016559.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 423, "start_aa": "Thr", "end_pos": 423, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr423", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 504, "start_aa": "Thr", "end_pos": 504, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr504", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" }, { "name": "calcium- and calmodulin-dependent protein kinase complex", "id": "GO:0005954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005954", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" }, { "name": "calcium/calmodulin-dependent protein kinase activity", "id": "GO:0004683", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004683", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SF44", "url": "https://www.uniprot.org/uniprotkb/F1SF44" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 435, "end_pos": 437, "annotation": "n_glycosylation_sequon" }, { "start_pos": 486, "end_pos": 488, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "17989", "name": "", "equation": "L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "17989", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/17989" } ] }, { "id": "46608", "name": "", "equation": "L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + 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318, "start_aa": "Phe", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 423, 504 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 435, "end_pos": 437 }, { "start_pos": 486, "end_pos": 488 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SF50-1", "uniprot_ac": "F1SF50", "uniprot_id": "F1SF50_PIG", "mass": { "chemical_mass": 28517.0, "monoisotopic_mass": 28517.0 }, "refseq": { "ac": "XP_020919545", "name": "UPF0739 protein C1orf74 homolog", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919545" }, "gene_names": [ { "name": "C1orf74", "type": "recommended", "evidence": [ { "id": "F1SF50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SF50" } ] }, { "name": "C9H1orf74", "type": "synonym", "evidence": [ { "id": "XP_020919545", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919545" } ] } ], "protein_names": [ { "name": "Chromosome 9 C1orf74 homolog", "type": "synonym", "evidence": [ { "id": "F1SF50", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SF50/entry#names_and_taxonomy" } ] }, { "name": "UPF0739 protein C1orf74 homolog", "type": "synonym", "evidence": [ { "id": 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SV=3 CANONICAL=F1SF50-1" }, "isoforms": [ { "isoform_ac": "F1SF50-1", "url": "https://www.uniprot.org/uniprotkb/F1SF50/entry#F1SF50-1", "sequence": { "sequence": "MSTLSLQLLVAAAQQTLGMGRSRGPPRAVCLHLAGEVLAVARGLKPALLYDCNCAGAAELQSYLEQLQGLGFPTRGLHILEIGEDSLIVCPERVCQHLEQVLLGSVAFVDVSSAQPHPSVCSLDQLQDLKALLAEIIAHLQGLKTDLSLAVSSSRLCSSDWNLCTVFGILLGYPVPYTFHVSQGGDNCLALTPLRVFTARISWRHSQPPVLLYSFSVPESLFPALRDILNTWEKDLRTRCRTQNDFADLSISSEVVTLPAVAL", "length": 263, "header": "tr|F1SF50-1|F1SF50_PIG Isoform 1 of Chromosome 9 C1orf74 homolog OS=Sus scrofa OX=9823 GN=C1orf74 PE=3 SV=3 CANONICAL=F1SF50-1" }, "locus": { "chromosome": "9", "start_pos": 133189587, "end_pos": 133188799, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085653.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085653.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064803.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064803.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SF50", "url": "https://www.uniprot.org/uniprotkb/F1SF50" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739703", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739703", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AFS7-1", "protein_name": "Chromosome 1 open reading frame 74", "gene_name": "C1orf74", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGPAARSEAQGVLPAPQLVAAAREALGAGSRRRLAAARALQLAGEVLAVAAGLKPALLYDCGAAGPAELRRYVERLWEAGLGLCRLHLLGVAGDVLLLHPGRARRRLEAALRAHPAPFMDVAAARSSPALCGPAEAAAIRGHLEALLAHLVAAEEAASSPVSCSEVVATGWNLCTVFGVLLGYPAAYTFPVEEGAENCLALTPLRVFTAQASCPRIQGGLRVQIYSFSIPESLCMELQEVLDAWREELRDDFCAQSDFIDLCISSEVVLLPAVAL", "length": 275 }, "evidence": [ { "id": "F1SF50", "url": "https://omabrowser.org/oma/group/F1SF50/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6QQA5-1", "protein_name": "UPF0739 protein C1orf74 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSTPSPQLLVAAAQQTLGMGKRRGPPRAVCLHLAGEVLAVARGLKPALLYDCSSAGAPEIQSYLEKLRGLGFPTQGLHVLEIAENSLIVHPEYVRRHLEQVLLGSIAFVDVSGSQPYPAVCSLDQLQDFKALVVEIITHLQGLQRDRSLAVSCSRLCSSAWNLCTVFGILLGYPVPYTFHENQGEDNCLAQTPLRVFTARISWLCCQPPVLLYSFSVPESLFLSLRDILNTWEKDLRTRCRTQNDFADLSISSEIVTLPAVAL", "length": 263 }, "evidence": [ { "id": "F1SF50", "url": "https://omabrowser.org/oma/group/F1SF50/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q567C3-1", "protein_name": "UPF0739 protein C1orf74 homolog", "gene_name": "", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVASSPETLISAAQKCLCSRKKRLSPSSCLEVTIHIIAVDLGVKPALLYDSNGASPDQLQLYLHSLQESSVVSNSLRIMSINDNTFIINPDIMKSHLGELLKSKSLPLIDVCSSRKRPVLCAFERSAEEMVRSFLEVFMNGLDLVVLEEELYKDWNLCTFFGILLGYPASYWFEQTQGFENCLSMTPLVVCTVWVRWQIHEIKQRCCLYSFSVPEELWSDVQSHIQRWTDHLRERFSKQTVLTDICFSRDTVTLPSVTL", "length": 259 }, "evidence": [ { "id": "F1SF50", "url": "https://omabrowser.org/oma/group/F1SF50/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5U2R2-1", "protein_name": "UPF0739 protein C1orf74 homolog", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSTPSPQLLVAAAQRTLGMGKRKCPPRATCLHLAGEVLAVARGLKPAVLYDCNSAGVLALQSYLEELQGLGFLKPGLHILEIGENNLIVSPEYTCQHLEQTLLGTVAFVDVSCSQPHPSVLSLDQLPGLKSLIADIITRFQELLKGVSPGVSYSKLHSSDWNLCTLFGILLGYPVSYTFDLNHGEGNCLTMTPLRVFTAQISWLSGQPPVPLYSFSVPESLFPPLRNFLSAWEKELRTRFRAQNAFADLSISSEVVTLPAVAL", "length": 263 }, "evidence": [ { "id": "F1SF50", "url": "https://omabrowser.org/oma/group/F1SF50/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q96LT6-1", "protein_name": "UPF0739 protein C1orf74", "gene_name": "C1orf74", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLLLDLMSSPSPQLLVAAAQQTLGMGKRRSPPQAICLHLAGEVLAVARGLKPAVLYDCNCAGASELQSYLEELKGLGFLTFGLHILEIGENSLIVSPEHVCQHLEQVLLGTIAFVDVSSCQRHPSVCSLDQLQDLKALVAEIITHLQGLQRDLSLAVSYSRLHSSDWNLCTVFGILLGYPVPYTFHLNQGDDNCLALTPLRVFTARISWLLGQPPILLYSFSVPESLFPGLRDILNTWEKDLRTRFRTQNDFADLSISSEIVTLPAVAL", "length": 269 }, "evidence": [ { "id": "F1SF50", "url": "https://omabrowser.org/oma/group/F1SF50/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9DAE8-1", "protein_name": "UPF0739 protein C1orf74 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTPSPQLLVAAAQQTLGMGKRKCPPRATCLHLAGEVLAVARGLKPAVLYDCNSAGVLALQSYLEELQGLGFLEPGLHILEIGENNFIVSPEYACQHLEQTLLGTVAFVDVSRSQPHPSVRSVDQLPDLKSLIADVITRFRGLKKDVSQGVSYTRLHSSDWNLCTVFGILLGYPVSYTFDLNREDDNCLTMTPLRVFTARISWLPGQPSILLYSFSVPESLFPALKNFLSAWEKELRTRFRAQNAFADLSISSEVVTLPAVAL", "length": 263 }, "evidence": [ { "id": "F1SF50", "url": "https://omabrowser.org/oma/group/F1SF50/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SF72-1", "uniprot_ac": "F1SF72", "uniprot_id": "F1SF72_PIG", "mass": { "chemical_mass": 58338.0, "monoisotopic_mass": 58338.0 }, "refseq": { "ac": "XP_020958076", "name": "glucocorticoid-induced transcript 1 protein isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958076" }, "gene_names": [ { "name": "GLCCI1", "type": "recommended", "evidence": [ { "id": "F1SF72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SF72" } ] }, { "name": "GLCCI1", "type": "synonym", "evidence": [ { "id": "XP_020958076", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958076" } ] } ], "protein_names": [ { "name": "Glucocorticoid induced 1", "type": "synonym", "evidence": [ { "id": "F1SF72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SF72/entry#names_and_taxonomy" } ] }, { "name": "glucocorticoid-induced transcript 1 protein isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020958076", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958076" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SF72", "url": "https://www.uniprot.org/uniprotkb/F1SF72" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GLCCI1", "url": "https://www.uniprot.org/uniprotkb/F1SF72", "locus": { "chromosome": "9", "start_pos": 78334077, "end_pos": 78217213, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015345", "url": "https://www.ensembl.org/id/ENSSSCG00000015345" } ] } } ], "crossref": [ { "id": "F1SF72", "url": "https://alphafold.ebi.ac.uk/entry/F1SF72", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015345", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015345", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511149", "url": "https://www.ncbi.nlm.nih.gov/gene/100511149", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026642", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026642", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511149", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511149", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ISAHNYV", "url": "https://omabrowser.org/oma/group/ISAHNYV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SF72", "url": "https://www.orthodb.org/?gene=F1SF72", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14972", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14972", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14972:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14972:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15388", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15388", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020958076", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020958076", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A3M9", "url": "https://www.uniprot.org/uniprotkb/A0A287A3M9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A3M9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A3M9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TNA7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TNA7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TNA7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TNA7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SF72", "url": "https://www.uniprot.org/uniprotkb/F1SF72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SF72-1", "url": "https://www.uniprot.org/uniprotkb/F1SF72-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSTASSSSSSSSQTPHPPPQRMRRSAAGSPPAAPAAGSGNGAGSGGVGCAPASGAGRLLQPIRATVPYQLLRGSQHSPTRPPAAAAAAAAAASLGSLPGPGAARGPSPPSPTPPPAAAPTEQAPRAKGRPRRSPESHRRSNSPERRSPGSPVCRVDRPKSQQVRTSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEQIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHIAINHTQATGSRSVPMPLSNVSVPKSSISRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKVNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDDTSTAGSTEASVQQSSQQQQLLQELQGEDHISTQNYVVI", "length": 549, "header": "tr|F1SF72-1|F1SF72_PIG Isoform 1 of Glucocorticoid induced 1 OS=Sus scrofa OX=9823 GN=GLCCI1 PE=4 SV=3 CANONICAL=F1SF72-1" }, "isoforms": [ { "isoform_ac": "A0A287A3M9-1", "url": "https://www.uniprot.org/uniprotkb/F1SF72/entry#A0A287A3M9-1", "sequence": { "sequence": "MKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHIAINHTQATGSRSVPMPLSNVSVPKSSISRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMA", "length": 236, "header": "tr|A0A287A3M9-1|A0A287A3M9_PIG Computationally mapped isoform of Glucocorticoid induced 1 OS=Sus scrofa OX=9823 GN=GLCCI1 PE=4 SV=1 CANONICAL=F1SF72-1" }, "locus": { "chromosome": "9", "start_pos": 78330041, "end_pos": 78246707, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044291.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044291.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038360.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038360.1" } ] } }, { "isoform_ac": "A0A4X1TNA7-1", "url": "https://www.uniprot.org/uniprotkb/F1SF72/entry#A0A4X1TNA7-1", "sequence": { "sequence": "MKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHIAINHTQATGSRSVPMPLSNVSVPKSSISRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKGLVSLSQPLSFHVLTKTRLISSQPDQLSVL", "length": 225, "header": "tr|A0A4X1TNA7-1|A0A4X1TNA7_PIG Computationally mapped isoform of Glucocorticoid induced 1 OS=Sus scrofa OX=9823 GN=GLCCI1 PE=4 SV=1 CANONICAL=F1SF72-1" }, "locus": { "chromosome": "9", "start_pos": 78331295, "end_pos": 78246707, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066070.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066070.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039539.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039539.1" } ] } }, { "isoform_ac": "F1SF72-1", "url": "https://www.uniprot.org/uniprotkb/F1SF72/entry#F1SF72-1", "sequence": { "sequence": "MSTASSSSSSSSQTPHPPPQRMRRSAAGSPPAAPAAGSGNGAGSGGVGCAPASGAGRLLQPIRATVPYQLLRGSQHSPTRPPAAAAAAAAAASLGSLPGPGAARGPSPPSPTPPPAAAPTEQAPRAKGRPRRSPESHRRSNSPERRSPGSPVCRVDRPKSQQVRTSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEQIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHIAINHTQATGSRSVPMPLSNVSVPKSSISRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKVNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDDTSTAGSTEASVQQSSQQQQLLQELQGEDHISTQNYVVI", "length": 549, "header": "tr|F1SF72-1|F1SF72_PIG Isoform 1 of Glucocorticoid induced 1 OS=Sus scrofa OX=9823 GN=GLCCI1 PE=4 SV=3 CANONICAL=F1SF72-1" }, "locus": { "chromosome": "9", "start_pos": 78331549, "end_pos": 78218306, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016718.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016718.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000016272.3", "url": "https://www.ensembl.org/id/ENSSSCP00000016272.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 112, "start_aa": "Thr", "end_pos": 112, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr112", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SF72", "url": "https://www.uniprot.org/uniprotkb/F1SF72" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511149", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511149", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q86VQ1-1", "protein_name": "Glucocorticoid-induced transcript 1 protein", "gene_name": "GLCCI1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSTASSSSSSSSSQTPHPPSQRMRRSAAGSPPAVAAAGSGNGAGGGGGVGCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTRPPVAAAAASLGSLPGPGAARGPSPSSPTPPAAAAPAEQAPRAKGRPRRSPESHRRSSSPERRSPGSPVCRADKAKSQQVRTSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMKDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEQIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHITISHTQATGSRSVPMPLSNISVPKSSVSRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKVNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDDTSTAGSMEASVQQPSQQQQLLQELQGEDHISAQNYVII", "length": 547 }, "evidence": [ { "id": "F1SF72", "url": "https://omabrowser.org/oma/group/F1SF72/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K3I9-1", "protein_name": "Glucocorticoid-induced transcript 1 protein", "gene_name": "Glcci1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTASSSSSQTPHSAPQRMRRSTAGSPPAAAGSGTGPAGSCAPAAGAGRLLQPIRATVPYQLLRGSQHSPTRPAAAATAAAALGSLSGPGGARGPSPSSPTPPPAAAPAEQAPRAKGRPRRSPESRRRSSSPERRSPGSPVCRVDRPKSQHIRTSSTIRRTSSLDTITGPYLTGQWPRDPHVHYPSCMRDKATQTPSCWAEEGAEKRSHQRSASWGSADQLKEIAKLRQQLQRSKQSSRHSKEKDRQSPLHGNHITISHTQAIGSRSVPMPLSNISVPKSSVSRVPCNVEGISPELEKVFIKENNGKEEVSKPLDIPDGRRAPLPAHYRSSSTRSIDTQTPSVQERSSSCSSHSPCVSPFCPPESQDGSPCSTEDLLYDRDKDSGSSSPLPKYASSPKPNNSYMFKREPPEGCERVKVFEEMASRQPISAPLFSCPDKNKVNFIPTGSAFCPVKLLGPLLPASDLMLKNSPNSGQSSALATLTVEQLSSRVSFTSLSDDTSTADSLEPSAQQPSQQQQLLQDLQVEEHVSTQNYVMI", "length": 537 }, "evidence": [ { "id": "F1SF72", "url": "https://omabrowser.org/oma/group/F1SF72/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SF72", "url": 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"homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 112 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 270, "end_pos": 272 }, { "start_pos": 286, "end_pos": 288 }, { "start_pos": 412, "end_pos": 414 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"uniprot_ac": "F1SF92", "uniprot_id": "F1SF92_PIG", "mass": { "chemical_mass": 42973.0, "monoisotopic_mass": 42973.0 }, "refseq": { "ac": "XP_003128150", "name": "zinc finger MYND domain-containing protein 12 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128150" }, "gene_names": [ { "name": "ZMYND12", "type": "recommended", "evidence": [ { "id": "F1SF92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SF92" } ] }, { "name": "ZMYND12", "type": "synonym", "evidence": [ { "id": "XP_003128150", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128150" } ] } ], "protein_names": [ { "name": "Zinc finger MYND-type containing 12", "type": "synonym", "evidence": [ { "id": "F1SF92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SF92/entry#names_and_taxonomy" } ] }, { "name": "zinc finger MYND domain-containing protein 12 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003128150", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128150" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SF92", "url": "https://www.uniprot.org/uniprotkb/F1SF92" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZMYND12", "url": "https://www.uniprot.org/uniprotkb/F1SF92", "locus": { "chromosome": "6", "start_pos": 168902741, "end_pos": 168877249, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003967", "url": "https://www.ensembl.org/id/ENSSSCG00000003967" } ] } } ], "crossref": [ { "id": "ENSSSCG00000003967", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003967", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524028", "url": "https://www.ncbi.nlm.nih.gov/gene/100524028", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002893", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002893", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011990", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011990", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053248", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053248", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524028", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524028", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KILFMLY", "url": "https://omabrowser.org/oma/group/KILFMLY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SF92", "url": "https://www.orthodb.org/?gene=F1SF92", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": 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"MDVIYPLAVPKGRRLCCEVCEAPAERVCGACTVTYYCGVVHQRADWRSIHEKICQLLIPLRTSRPFYNSEEERQHGLQQLQRRQKHLIEFCYTVAQKYLFEGKYEAAVPAALHSLRFRMNVHGLSSVELVPAYLLLAEASLGLGRVVQAEEYLSQAQWTVLKSTECSYATQSLLHRNLGLVCMAKGNCEEARDHLANDIYFASCAFGTEHIRTSGGYFHLANIFHGLQKLDLADTLYTKVSEIWSKYLNDRCEALSQARIQQLDLLGKRFETDTGLDEAQEAEAIQILTSILTIREATSDRAPQKTIFVLKILAMLYYLMMDSSKAQEYALRAFDLAKEQKLSVREQNSIQDVLNLISAEEAHPITQPPGSSRWGLVKGS", "length": 380, "header": "tr|F1SF92-1|F1SF92_PIG Isoform 1 of Zinc finger MYND-type containing 12 OS=Sus scrofa OX=9823 GN=ZMYND12 PE=4 SV=3 CANONICAL=F1SF92-1" }, "isoforms": [ { "isoform_ac": "F1SF92-1", "url": "https://www.uniprot.org/uniprotkb/F1SF92/entry#F1SF92-1", "sequence": { "sequence": 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"publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SF92", "url": "https://www.uniprot.org/uniprotkb/F1SF92" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524028", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524028", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZQZ3-1", "protein_name": "Zinc finger, MYND-type containing 12", "gene_name": "Zmynd12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNVIYPLAVPKGRRLCCEVCEAPAERMCTACTVTYYCGPVHQKADWGSIHAKICQLLIPLRTSMPFFNSEEERQHGLQQLQRRQEHLIEFCYTVAQKYLFEGRHEDAVPAALHSLRFRMNVHGLSSVELVPAYLLLAEASLGLGRIVQAEEYLSQAQWTVLKSTDCSNATHSLLHRNLGLLYIAKKNLEEARYHLANDIYFASCAFGTEDVRTSGGYFHLANIFYSLKKMELADTLYTKVSEIWYTYLSSHYQALLHARTQQTDLLGKQFMNDTGLDEAQEAEAIRILTSILIIQESTSTQAPQKGILILKTLGILYYLMLEFSKAKEYATKALSLAEVYLSEEEQGVIQELLSAILAEEKQLTT", "length": 365 }, "evidence": [ { "id": "F1SF92", "url": "https://omabrowser.org/oma/group/F1SF92/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A2BGJ5-1", "protein_name": "Zinc finger MYND domain-containing protein 12", "gene_name": "Zmynd12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102163937", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102163937", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9TCU1-1", "protein_name": "G protein-coupled receptor 137C", "gene_name": "GPR137C", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRVSVPGPAAGREPSTPGGGGGDAVAAASGAAVPGSVQLALSILHALLYAALFAFAYLQLWRLLLYRERRLSYQSLCLFLCLLWAALRTTLFSAAFSLSGSLPLLRPPAHLHFFPHWLLYCFPSCLQFSTLCLLNLYLAEVICKVRCATELDKHKILLHLGFILASLLFLVVNLTCAMLVHGDVPENQLKWTVFVRALINDSLFILCAISLVSYICKITKMSSANVYLESKGMSLCQTVVVGSVVILLYSSRACYNLVVITISQDTLESPFNYGWDNLSDKAHVKDISGEEYIVFGMVLFLWEHVPAWSVVLFFRAQRLNQNLAPAGMINSHSYSSRAYFFDNPRRYDSDDDLPRLGSSREGSLSNSQGLGWYGTMTGCGSSSYTVSPHLNGPLTDTAPLLFTCSNLDMNSHHSLYVTPQN", "length": 421 }, "evidence": [ { "id": "F1SFE8", "url": "https://omabrowser.org/oma/group/F1SFE8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": 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A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFG1", "url": "https://www.uniprot.org/uniprotkb/F1SFG1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523468", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523468", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5PHW0-1", "protein_name": "Family with sequence similarity 43 member A", "gene_name": "FAM43A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPWKRSKVELVAGEARRQSKPKGYAVSVHYSALTSLARACPESALHRVGSMFRSKRRKFRVTSEDPTYTVLYLGNATTIQSKGEGCTDLAVCKIWSKSEAGRQGTKMKLTISAQGIRMAHAEDKGLRRPGHLYLLHRVTYCVADPRLPRVFAWIYRHELKHKAVMLRCHAVLVSKPEKAKAMALLLYQTSATALAEFRRLKKRDDARHQQQQLVGEQSIPLVPLRKLLNGQCCYKPPVERSRSAPKLGSITEDLLGEEQEERAMHCDCEDILEALGEPEGELLRAGAGRGEGPELGRLLRDLGELSLGNDLRSLRADLGVRRLLSGESTGSESSLESTGPDGAAPPCNGADQPPPGDPESG", "length": 362 }, "evidence": [ { "id": "F1SFG1", "url": "https://omabrowser.org/oma/group/F1SFG1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BFN0-1", "protein_name": "Family with sequence similarity 43 member A", "gene_name": "FAM43A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLPWKKHKFELLAEAPPRQASKPKGYAVSLHYSALSSLARACPEGALSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIWSKSEAGRQGTKMKLTVSAQGIRMVHAEERALRRPGHLYLLHRVTYCVADARLPKVFAWVYRHELKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALAEFKRLKRRDDARHQQQELVGAHTIPLVPLRKLLLHGPCCYKPPVERSRSAPKLGSITEDLLGEQQEQELQEEEEEEHAEGCPEEEEDRAGEGEPAEPEAEAKRALVVAMHFECGDLLDTLESGHEEALGGGGVSPGPEAGSSPLLLGSTSDMRAELSQLINDLGELSFGNDVRSLQADLRVTRLLSGESTGSESSIEGGGPDANTATAGDPSGPADCASPDEPHSG", "length": 423 }, "evidence": [ { "id": "F1SFG1", "url": "https://omabrowser.org/oma/group/F1SFG1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8BUP8-1", "protein_name": "Protein FAM43A", "gene_name": "Fam43a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPWKKHKFELLAEAPPRQASKPKGYAVSLHYSALSSLARACPEGALSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIWSKSEAGRQGTKMKLTVSAQGIRMVHAEERALRRPGHLYLLHRVTYCVADARLPKVFAWVYRHELKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALAEFKRLKRRDDARHQQQELVGAHTIPLVPLRKLLLHGPCCYKPPVERSRSAPKLGSITEDLLGEQQEEELQEEEEEHLEDCLEEEEEEDGVGDGDPAEEEAEAQRALVVAMQLECEDLLDPLENGHEEALGDGGVSLGPSSGTSLPLSVCASDMKAQLSQLISDLGDLSFGNDVSTLETDLRVTRLLSGESTGSESSIEGGGLDATPVSPGNPSGPADSTSLDEPYSG", "length": 424 }, "evidence": [ { "id": "F1SFG1", "url": "https://omabrowser.org/oma/group/F1SFG1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N2R8-1", "protein_name": "Protein FAM43A", "gene_name": "FAM43A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLPWKKHKFELLAEAPPRQASKPKGYAVSLHYSALSSLARACPEGALSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIWSKSEAGRQGTKMKLTVSAQGIRMVHAEERALRRPGHLYLLHRVTYCVADARLPKVFAWVYRHELKHKAVMLRCHAVLVSKPEKAQAMALLLYQTSANALAEFKRLKRRDDARHQQQELVGAHTIPLVPLRKLLLHGPCCYKPPVERSRSAPKLGSITEDLLGEQLEQELQEEEEEEQPEGCPEEEENRAAEGDPAEEEAEAQRALVVAMHFECGDLLDTLENGRGEALGGGGGSLGPGAGPPPLLLGSASDMKAELSQLISDLGELSFGNDVRTLQADLRVTRLLSGDSTGSESSIEGGGPDATSATAGDSSRQADGASADEPHSG", "length": 423 }, "evidence": [ { "id": "F1SFG1", "url": "https://omabrowser.org/oma/group/F1SFG1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SFG1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFG1" }, { "id": "SM00462", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00462" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PID", "eco_id": "ECO_0000259", "start_pos": 65, "end_pos": 205, "start_aa": "Ser", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 77, "end_pos": 79 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SFH0-1", "uniprot_ac": "F1SFH0", "uniprot_id": "F1SFH0_PIG", "mass": { "chemical_mass": 55773.0, "monoisotopic_mass": 55773.0 }, "refseq": { "ac": "XP_001925594", "name": "protein MB21D2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925594" }, "gene_names": [ { "name": "MB21D2", "type": "recommended", "evidence": [ { "id": "F1SFH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFH0" } ] }, { "name": "MB21D2", "type": "synonym", "evidence": [ { "id": "XP_001925594", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925594" } ] } ], "protein_names": [ { "name": "Nucleotidyltransferase MB21D2", "type": "recommended", "evidence": [ { "id": "F1SFH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFH0/entry#names_and_taxonomy" } ] }, { "name": "Mab-21 domain-containing protein 2", "type": "synonym", "evidence": [ { "id": "F1SFH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFH0/entry#names_and_taxonomy" } ] }, { "name": "protein MB21D2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001925594", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925594" } ] } ], "function": [ { "annotation": "Probable nucleotidyltransferase that catalyzes the formation of cyclic dinucleotide second messenger in response to some unknown stimulus.", "evidence": [ { "database": "UniProtKB", "id": "F1SFH0", "url": "https://www.uniprot.org/uniprotkb/F1SFH0#function" }, { "database": "UniProtKB", "id": "ARBA00054069", "url": "https://www.uniprot.org/uniprotkb/ARBA00054069#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SFH0", "url": "https://www.uniprot.org/uniprotkb/F1SFH0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MB21D2", "url": "https://www.uniprot.org/uniprotkb/F1SFH0", "locus": { "chromosome": "13", "start_pos": 129875636, "end_pos": 129997215, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011819", "url": "https://www.ensembl.org/id/ENSSSCG00000011819" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011819", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011819", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156951", "url": "https://www.ncbi.nlm.nih.gov/gene/100156951", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR024810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046903", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046903", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046906", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046906", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156951", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156951", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FTRHDQR", "url": "https://omabrowser.org/oma/group/FTRHDQR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SFH0", "url": "https://www.orthodb.org/?gene=F1SFH0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10656", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10656", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10656:SF47", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10656:SF47", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03281", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03281", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20266", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20266", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001925594", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925594", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SFH0", "url": "https://www.uniprot.org/uniprotkb/F1SFH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFH0-1", "url": "https://www.uniprot.org/uniprotkb/F1SFH0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKMAAPTASKAASLGCNNKPAFPELDFRSGARVEELNKLIQEFTKHDQREYDDQRALEIHTAKDFIFSMLGMVQKLDQKLPVANEYLLLSGGVREGVVDLDLDELNVYARGTDYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTISKWKDCCTIVDHINGATNYFFSPTKVADWFYDSISIVLSEIQKKPQRGMPKVEKVEKNGTIISIILGVGSSRMLYDIVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLVPACSYKGKKDNEWRLSFARSEVQLKKCISSSLMQAYQACKAIIIKLLSRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFLLGLIDDLQHCLVNKMCPNYFIPQCNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLELQRRGSTTSIPSPQSDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 491, "header": "tr|F1SFH0-1|F1SFH0_PIG Isoform 1 of Nucleotidyltransferase MB21D2 OS=Sus scrofa OX=9823 GN=MB21D2 PE=3 SV=2 CANONICAL=F1SFH0-1" }, "isoforms": [ { "isoform_ac": "F1SFH0-1", "url": "https://www.uniprot.org/uniprotkb/F1SFH0/entry#F1SFH0-1", "sequence": { "sequence": "MKMAAPTASKAASLGCNNKPAFPELDFRSGARVEELNKLIQEFTKHDQREYDDQRALEIHTAKDFIFSMLGMVQKLDQKLPVANEYLLLSGGVREGVVDLDLDELNVYARGTDYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTISKWKDCCTIVDHINGATNYFFSPTKVADWFYDSISIVLSEIQKKPQRGMPKVEKVEKNGTIISIILGVGSSRMLYDIVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLVPACSYKGKKDNEWRLSFARSEVQLKKCISSSLMQAYQACKAIIIKLLSRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFLLGLIDDLQHCLVNKMCPNYFIPQCNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLELQRRGSTTSIPSPQSDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 491, "header": "tr|F1SFH0-1|F1SFH0_PIG Isoform 1 of Nucleotidyltransferase MB21D2 OS=Sus scrofa OX=9823 GN=MB21D2 PE=3 SV=2 CANONICAL=F1SFH0-1" }, "locus": { "chromosome": "13", "start_pos": 129996793, "end_pos": 129877469, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012931.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012931.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012590.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012590.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFH0", "url": "https://www.uniprot.org/uniprotkb/F1SFH0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156951", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156951", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4ACS3-1", "protein_name": "Nucleotidyltransferase MB21D2", "gene_name": "Mb21d2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKMAAPTASKAASMGCNNKPAFPELDFRSGARVEELNKLIQEFTRHDQREYDDQRALEIHTAKDFIFSMLGMVQKLDQKLPVANEYLLLSGGVREGVVDLDLDELNVYARGTDYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTISKWKDCCTIADHINGATNYFFSPTKVADWFYDSISIVLSEIQKKPQRGMPKVEKVEKNGTIISIILGVGSSRMLYDIVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLVPACSYKGKKDNEWRLSFARSEVQLKKCISGSLMQAYQACKAIIIKLLSRPKAISPYHLRSMMLWACDRLPVSYLAQEDYAAHFLLGLIDDLQHCLVNKMCPNYFIPQCNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLKLQRRGSTTSIPSPQSDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 491 }, "evidence": [ { "id": "F1SFH0", "url": "https://omabrowser.org/oma/group/F1SFH0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1B9A3-1", "protein_name": "Nucleotidyltransferase MB21D2", "gene_name": "MB21D2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKMAAPTASKAASLGCNNKPAFPELDFRSGARVEELNKLIQEFTKHDQREYDDQRALEIHTAKDFIFSMLGMVQKLDQKLPVANEYLLLSGGVREGVVDLDLDELNVYARGTDYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTISKWKDCCTIVDHINGATNYFFSPTKVADWFYDSISIVLSEIQKKPQRGMPKVEKVEKNGTIISIILGVGSSRMLYDIVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLVPACSYKGKKDNEWRLSFARSEVQLKKCISSSLMQAYQACKAIIIKLLSRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFLLGLIDDLQHCLVNKMCPNYFIPQCNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLELQRRGSTTSIPSPQSDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 491 }, "evidence": [ { "id": "F1SFH0", "url": "https://omabrowser.org/oma/group/F1SFH0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1C397-1", "protein_name": "Nucleotidyltransferase MB21D2", "gene_name": "MB21D2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKMAAPLASKAGSAGTNSKPPFPELDFRSGARVEELNKLIQEFTKHDQREYDDQRALEIHTAKDFIFSMLGMVQKLDQKLPVANEYLLLSGGVREGVVDIDLDELNVYARGTDYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTISKWKDCCTIVDHINGATNYFFSPTKVADWFYDSISIVLSEIQKKPQRGMPKVEKVEKNGTIISIILGVGSSRMLYDIVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLVPACSYKGKKDNEWRLSFARSEVQLKKCISSSLMQAYQACKAIIIKLLSRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFLLGLIDDLQHCLVNKMCPNYFIPQCNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLELQRRGSTTSIPSPQSDGGDTNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 491 }, "evidence": [ { "id": "F1SFH0", "url": "https://omabrowser.org/oma/group/F1SFH0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7FBQ4-1", "protein_name": "Nucleotidyltransferase MB21D2", "gene_name": "LOC556707", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAAPALSSRAASAGNSPTATPSSSKPVPQAPELDFRSGTRIEELNRLIGEFSKHEQREYDDQRALEIHTAKDFIFSMLGMVQKLDQKLPVANEYLLLSGGVREGVVDMDLDELTVYARGADYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTINKWKDCCTMIDHANGATNYFFSPTLVADWFYESISMVLAEIQKKPQRGVPRVEKVERNATVISIILGVGGSRMLYDVVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLLPACSSTGQKENEWRLSFARSEVQLKKCISASLMQAYQACKALIIKLLSRPKAISPYHLRSLMLWSCDRLPHTYLAQEDYAAHFLLGLIDDLQHCLVNKTCPNYFIPQCNMLEHLSDDMAMLHARKLSSVRSDPAEHLRSAIEHAKAASRLTVELQWRSGSSNLPSPLSETGADQQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 499 }, "evidence": [ { "id": "F1SFH0", "url": "https://omabrowser.org/oma/group/F1SFH0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8C525-1", "protein_name": "Nucleotidyltransferase MB21D2", "gene_name": "Mb21d2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLQTPMTGMVQKLDQKLPVANEYLLLSGGVREGVVDLDLDELNVYARGTDYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTISKWKGCCTIADHINGATNYFFSPTKVADWFYDSISIVLSEIQKKPQRGMPKVEKVEKNGTIISIILGVGSSRMLYDIVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLVPACSYKGKKDNEWRLSFARSEVQLKKCISGSLMQAYQACKAIIIKLLSRPKAISPYHLRSMMLWACDRLPASYLAQEDYAAHFLLGLIDDLQHCLVNKMCPNYFIPQCNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLKLQRRGSTTSIPSPQSDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 428 }, "evidence": [ { "id": "F1SFH0", "url": "https://omabrowser.org/oma/group/F1SFH0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IYB1-1", "protein_name": "Nucleotidyltransferase MB21D2", "gene_name": "MB21D2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKMAAPTANKAASLGCNNKPAFPELDFRSGARVEELNKLIQEFTKHDQREYDDQRALEIHTAKDFIFSMLGMVQKLDQKLPVANEYLLLSGGVREGVVDLDLDELNVYARGTDYDMDFTLLVPALKLHDRNQPVTLDMRHSALCHSWLSLRLFDEGTISKWKDCCTIVDHINGATNYFFSPTKVADWFYDSISIVLSEIQKKPQRGMPKVEKVEKNGTIISIILGVGSSRMLYDIVPVVSFKGWPAVAQSWLMENHFWDGKITEEEVISGFYLVPACSYKGKKDNEWRLSFARSEVQLKKCISSSLMQAYQACKAIIIKLLSRPKAISPYHLRSMMLWACDRLPANYLAQEDYAAHFLLGLIDDLQHCLVNKMCPNYFIPQCNMLEHLSEETVMLHARKLSSVRSDPAEHLRTAIEHVKAANRLTLELQRRGSTTSIPSPQSDGGDPNQPDDRLAKKLQQLVTENPGKSISVFINPDDVTRPHFRIDDKFF", "length": 491 }, "evidence": [ { "id": "F1SFH0", "url": "https://omabrowser.org/oma/group/F1SFH0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein-containing complex binding", "id": "GO:0044877", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044877", "evidence": [ { "database": "UniProtKB", "id": "F1SFH0", "url": "https://www.uniprot.org/uniprotkb/F1SFH0" } ], "pmid": "" }, { "name": "nucleotidyltransferase activity", "id": "GO:0016779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016779", "evidence": [ { "database": "UniProtKB", "id": "F1SFH0", "url": "https://www.uniprot.org/uniprotkb/F1SFH0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 216, "end_pos": 218, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SFH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFH0" }, { "id": "PF20266", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20266" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Mab-21-like HhH/H2TH-like", "eco_id": "ECO_0000259", "start_pos": 325, "end_pos": 400, "start_aa": "Lys", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SFH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFH0" }, { "id": "PF03281", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03281" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Mab-21-like nucleotidyltransferase", "eco_id": "ECO_0000259", "start_pos": 136, "end_pos": 298, "start_aa": "Leu", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 216, "end_pos": 218 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SFH6-1", "uniprot_ac": "F1SFH6", "uniprot_id": "F1SFH6_PIG", "mass": { "chemical_mass": 31562.0, "monoisotopic_mass": 31562.0 }, "refseq": { "ac": "XP_013837734", "name": "tumor protein p63-regulated gene 1 protein isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837734" }, "gene_names": [ { "name": "TPRG1", "type": "recommended", "evidence": [ { "id": "F1SFH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFH6" } ] }, { "name": "TPRG1", "type": "synonym", "evidence": [ { "id": "XP_013837734", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837734" } ] } ], "protein_names": [ { "name": "Tumor protein p63 regulated 1", "type": "synonym", "evidence": [ { "id": "F1SFH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFH6/entry#names_and_taxonomy" } ] }, { "name": "tumor protein p63-regulated gene 1 protein isoform X2", "type": "synonym", "evidence": [ { "id": "XP_013837734", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837734" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SFH6", "url": "https://www.uniprot.org/uniprotkb/F1SFH6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TPRG1", "url": "https://www.uniprot.org/uniprotkb/F1SFH6", "locus": { "chromosome": "13", "start_pos": 126861438, "end_pos": 126724573, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011812", "url": "https://www.ensembl.org/id/ENSSSCG00000011812" } ] } } ], "crossref": [ { "id": "F1SFH6", "url": "https://alphafold.ebi.ac.uk/entry/F1SFH6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011812", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011812", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519924", "url": "https://www.ncbi.nlm.nih.gov/gene/100519924", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR022158", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022158", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034753", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034753", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040242", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040242", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "F1SFH6", "url": "https://www.orthodb.org/?gene=F1SFH6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31108", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31108", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31108:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31108:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013837734", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013837734", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SFH6", "url": "https://www.uniprot.org/uniprotkb/F1SFH6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFH6-1", "url": "https://www.uniprot.org/uniprotkb/F1SFH6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSTIGSFEGFQPVSLKQEGDDQAFETDHLSAKEEDPDTLSGPRQISRLPSMTESSLCPNPYHRPYSSRKYFVTWPGTIETAMEDLKGHIAKTSGETIQGFWLLTEIDHWNNEKERILLVTDKTLLICKYDFIMLSCVQLQRIPLSAVYRICLGKFSFPGMSLDKRQGEGLRIYWGRPEQQSLLSRWNPWSTEVPYATFTEHPVKYTSEKFIEICKLSGFTCKLIPAIRNAHKNSTGCEGGKGLIVLTEPILIETYTGLMSFIGNRNKLGYALARGSIGF", "length": 279, "header": "tr|F1SFH6-1|F1SFH6_PIG Isoform 1 of Tumor protein p63 regulated 1 OS=Sus scrofa OX=9823 GN=TPRG1 PE=3 SV=3 CANONICAL=F1SFH6-1" }, "isoforms": [ { "isoform_ac": "F1SFH6-1", "url": "https://www.uniprot.org/uniprotkb/F1SFH6/entry#F1SFH6-1", "sequence": { "sequence": "MSTIGSFEGFQPVSLKQEGDDQAFETDHLSAKEEDPDTLSGPRQISRLPSMTESSLCPNPYHRPYSSRKYFVTWPGTIETAMEDLKGHIAKTSGETIQGFWLLTEIDHWNNEKERILLVTDKTLLICKYDFIMLSCVQLQRIPLSAVYRICLGKFSFPGMSLDKRQGEGLRIYWGRPEQQSLLSRWNPWSTEVPYATFTEHPVKYTSEKFIEICKLSGFTCKLIPAIRNAHKNSTGCEGGKGLIVLTEPILIETYTGLMSFIGNRNKLGYALARGSIGF", "length": 279, "header": "tr|F1SFH6-1|F1SFH6_PIG Isoform 1 of Tumor protein p63 regulated 1 OS=Sus scrofa OX=9823 GN=TPRG1 PE=3 SV=3 CANONICAL=F1SFH6-1" }, "locus": { "chromosome": "13", "start_pos": 126860434, "end_pos": 126755783, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012924.3", "url": "https://www.ensembl.org/id/ENSSSCT00000012924.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012583.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012583.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFH6", "url": "https://www.uniprot.org/uniprotkb/F1SFH6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SFH6", "url": "https://www.uniprot.org/uniprotkb/F1SFH6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SFH6", "url": "https://www.uniprot.org/uniprotkb/F1SFH6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 233, "end_pos": 235, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SFH6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 279, 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"MYKWLVRILGTIFRFCDRPVPSSRALLKRRRSNSSLFSTVDTDEVPAKRPRLDCFIHQVKTSLYNAASLFGFPFQLTTKPMVTSACNGTRNVAPSGEVFSNSSSCELTASGSWNNMLKLGNKSPNGISDYPKIRVTVTRDQPRRVLPSFGFTLSSEGYNRRPGGRRHSKGHPESSLTWKPQEQVVTEMISEEGGKGLRRPHCTVEEGVQKEEREKYRRLLERLKEGGHGNSVPPVTSTHHGSQRSQMDTLKTKSWGEEQSHGVRTTQFVPKQYRVVETRGPLCSVRSEKRCSKGKISDTEKTVGIRLDNESRRGHQLEPDLSEEVSARLRLGSGSNGLLRRKMSILETKEKNCSGKERDKRTEDLLELTEDMEKEISNALGHGPQDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLMERNKKQGYPALYAFSTFFYPKLKSGGYQAVKRWTKGVNLFEQELILVPIHRKVHWSLVVIDLRKKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNIDLNLLEWTHYSLKPHHQMPLFRKKMVWEILHQQLL", "length": 557, "header": "tr|F1SFK1-1|F1SFK1_PIG Isoform 1 of SUMO specific peptidase 2 OS=Sus scrofa OX=9823 GN=SENP2 PE=3 SV=3 CANONICAL=F1SFK1-1" }, "locus": { "chromosome": "13", "start_pos": 123468640, "end_pos": 123430141, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012906.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012906.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012565.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012565.4" } ] } }, { "isoform_ac": "I3LMW0-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1/entry#I3LMW0-1", "sequence": { "sequence": "MPSLFSTVDTDEVPAKRPRLDCFIHQVKTSLYNAASLFGFPFQLTTKPMVTSACNGTRNVAPSGEVFSNSSSCELTASGSWNNMLKLGNKSPNGISDYPKIRVTVTRDQPRRVLPSFGFTLSSEGYNRRPGGRRHSKGHPESSLTWKPQEQVVTEMISEEGGKGLRRPHCTVEEGVQKEEREKYRRLLERLKEGGHGNSVPPVTSTHHGSQRSQMDTLKTKSWGEEQSHGVRTTQFVPKQYRVVETRGPLCSVRSEKRCSKGKISDTEKTVGIRLDNESRRGHQLEPDLSEEVSARLRLGSGSNGLLRRKMSILETKEKNCSGKERDKRTEDLLELTEDMEKEISNALGHGPQDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLMERNKKQGYPALYAFSTFFYPKLKSGGYQAVKRWTKGVNLFEQELILVPIHRKVHWSLVVIDLRKKCLKYLDSMGQKGHRICEILLQYLQDESKTKRNIDLNLLEWTHYSLKPHEIPQQLNGSDCGMFTCKYADYVSRDRPITFTQHQMPLFRKKMVWEILHQQLL", "length": 557, "header": "tr|I3LMW0-1|I3LMW0_PIG Computationally mapped isoform of SUMO specific peptidase 2 OS=Sus scrofa OX=9823 GN=SENP2 PE=3 SV=4 CANONICAL=F1SFK1-1" }, "locus": { "chromosome": "13", "start_pos": 123468640, "end_pos": 123431782, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029102.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029102.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025432.4", "url": "https://www.ensembl.org/id/ENSSSCP00000025432.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-3065679", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3065679", "resource": "Reactome", "description": "SUMO is proteolytically processed" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "deSUMOylase activity", "id": "GO:0016929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016929", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "SUMO-specific endopeptidase activity", "id": "GO:0070139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070139", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "nuclear pore", "id": "GO:0005643", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005643", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "PML body", "id": "GO:0016605", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016605", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "protein desumoylation", "id": "GO:0016926", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016926", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "regulation of primary metabolic process", "id": "GO:0080090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080090", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "regulation of macromolecule metabolic process", "id": "GO:0060255", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060255", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "positive regulation of protein ubiquitination", "id": "GO:0031398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031398", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "fat cell differentiation", "id": "GO:0045444", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045444", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "negative regulation of protein ubiquitination", "id": "GO:0031397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031397", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" }, { "name": "protein destabilization", "id": "GO:0031648", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031648", "evidence": [ { "database": "UniProtKB", "id": "F1SFK1", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 121, "end_pos": 123, "annotation": "n_glycosylation_sequon" }, { "start_pos": 309, "end_pos": 311, "annotation": "n_glycosylation_sequon" }, { "start_pos": 33, "end_pos": 35, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" }, { "start_pos": 87, "end_pos": 89, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SFK1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 557, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SFK1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SFK1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SFK1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFK1" }, { "id": "PS50600", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50600" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like protease family profile", "eco_id": "ECO_0000259", "start_pos": 395, "end_pos": 557, "start_aa": "Leu", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 101, "end_pos": 103 }, { "start_pos": 121, "end_pos": 123 }, { "start_pos": 309, "end_pos": 311 }, { "start_pos": 33, "end_pos": 35 }, { "start_pos": 352, "end_pos": 354 }, { "start_pos": 87, "end_pos": 89 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SFM5-1", "uniprot_ac": "F1SFM5", "uniprot_id": "F1SFM5_PIG", "mass": { "chemical_mass": 112867.0, "monoisotopic_mass": 112867.0 }, "refseq": { "ac": "XP_020924884", "name": "contactin-3 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924884" }, "gene_names": [ { "name": "CNTN3", "type": "recommended", "evidence": [ { "id": "F1SFM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" } ] }, { "name": "CNTN3", "type": "synonym", "evidence": [ { "id": "XP_020924884", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924884" } ] } ], "protein_names": [ { "name": "Contactin 3", "type": "synonym", "evidence": [ { "id": "F1SFM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFM5/entry#names_and_taxonomy" } ] }, { "name": "contactin-3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020924884", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924884" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SFM5", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CNTN3", "url": "https://www.uniprot.org/uniprotkb/F1SFM5", "locus": { "chromosome": "13", "start_pos": 55648528, "end_pos": 56017767, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011522", "url": "https://www.ensembl.org/id/ENSSSCG00000011522" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011522", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011522", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00063", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00063", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511594", "url": "https://www.ncbi.nlm.nih.gov/gene/100511594", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HKLMGAR", "url": "https://omabrowser.org/oma/group/HKLMGAR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44170", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44170", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44170:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44170:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020924884", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020924884", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SFM5", "url": "https://www.uniprot.org/uniprotkb/F1SFM5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFM5-1", "url": "https://www.uniprot.org/uniprotkb/F1SFM5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMLSWKQLILLSFIGCLGGELLLQGPVFIKEPSNSIFPVGTEDKKITLSCEARGNPTPHYRWQLNGSDVNLSMEYRYKLHGGNLVLINPDRNRDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVETSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSNKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIRDVEIAVEDSLYWECRASGKPKPSYRWLKNGEALALEERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKTPMKKLIQVQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRISFLKDGGLKIANVTKADVGIYTCIAENQFGKANGSTHLVVTEPTRIILAPSNMDVSVGESIILPCQVQHDPLLDITFTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNDSILPFSLYEVKVGVYNNKGEGPFSPVTAVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAVPWKLSNGHLLGYELRYWNNGGEEESSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATTKKTPPSQPPGNVVWNATDTKVLLNWEQVRAMENESEVTGYKVFYRTSSQNNVQVLNTNKTSAELLLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGCTSAICIVHPVSSSISLVLFFIVNALW", "length": 1028, "header": "tr|F1SFM5-1|F1SFM5_PIG Isoform 1 of Contactin 3 OS=Sus scrofa OX=9823 GN=CNTN3 PE=3 SV=3 CANONICAL=F1SFM5-1" }, "isoforms": [ { "isoform_ac": "F1SFM5-1", "url": "https://www.uniprot.org/uniprotkb/F1SFM5/entry#F1SFM5-1", "sequence": { "sequence": "MMLSWKQLILLSFIGCLGGELLLQGPVFIKEPSNSIFPVGTEDKKITLSCEARGNPTPHYRWQLNGSDVNLSMEYRYKLHGGNLVLINPDRNRDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVETSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSNKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIRDVEIAVEDSLYWECRASGKPKPSYRWLKNGEALALEERIQIENGALTISNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSKTPMKKLIQVQVGSEVSLDCKPRASPRALSSWKKGDVLVQETDRISFLKDGGLKIANVTKADVGIYTCIAENQFGKANGSTHLVVTEPTRIILAPSNMDVSVGESIILPCQVQHDPLLDITFTWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGRYVCMVQTEVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGTDNHSPVISYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNWIQTVVTSPDTPRYVFRNDSILPFSLYEVKVGVYNNKGEGPFSPVTAVFSAEEEPTIAPSQVSANSLSSSEIEVSWNAVPWKLSNGHLLGYELRYWNNGGEEESSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATTKKTPPSQPPGNVVWNATDTKVLLNWEQVRAMENESEVTGYKVFYRTSSQNNVQVLNTNKTSAELLLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGCTSAICIVHPVSSSISLVLFFIVNALW", "length": 1028, "header": "tr|F1SFM5-1|F1SFM5_PIG Isoform 1 of Contactin 3 OS=Sus scrofa OX=9823 GN=CNTN3 PE=3 SV=3 CANONICAL=F1SFM5-1" }, "locus": { "chromosome": "13", "start_pos": 55926398, "end_pos": 55650652, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012610.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012610.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012281.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012281.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFM5", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MQU1-1", "protein_name": "Contactin 3", "gene_name": "CNTN3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLLSWKHLIFLSFIGCLEGELLLQGPVFVKEPSNSIFPVGSEDKKITLNCEARGNPSPHYRWQLNGSDIDLSMEYRYKLIRGNLVVINPNRNWDTGNYQCFATNSVGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDSGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVELAVEDSLYWECRASGKPKPSYRWLKNGEALVLEERIQIENGALTISNLNVTDSGMFQCIAENKHGLVYSSAELKVMASAPDFSKTPMKKLIQVQVGSEVNLDCKPRASPRALSSWKKGEVIVQENERTSFLNDGGLKIVNVTKADAGIYTCIAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLATMFTWYFNGALADFRKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPESVKVDEITDTTAQLSWKEGTDNHSPVIAYSVQARTPFSVGWQTATTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVSGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTNWIQTVVTSPDTPRYIFRNESILPFSLYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTTAPSQVSANSLSSSEIEVSWNAIPWKLSNGHLLGYEVRYWNNGGEEDSSSKLKVAGNVTSARLRGLKSNLAYYTAVRAFNSAGTGPFSATVNATTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNTNKTSAELLLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITNMDARGCTSAISTVYPVSSYVSVIMFFIVNTLW", "length": 1028 }, "evidence": [ { "id": "F1SFM5", "url": "https://omabrowser.org/oma/group/F1SFM5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V0ZE18-1", "protein_name": "Contactin-3", "gene_name": "CNTN3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MMLLWKQLFLVSLVGCLGADPESSRTKMRSTVSVREGQGVVLLCGTPPRAGELSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNSQVLGSPTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRTDGMPFPSKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYAKPHWIQMIKDTEIAVEDTLYWDCRASGKPKPSYRWLKNGEQLSVEGRIQIENGALTISSLNLTDSGRYQCIAENKHGVIYSSAELRVVASAPDFSKNPMKKMIQVQIGSTVDFECKPKASPKARCSWKKGGEQLHENERITLLKDGGLRITNVTKVDAGSYTCVATNQFGTASGTTNLVVTEPTRIILAPSNMDVTVGESVILPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSASGDLMIRNIQLKHSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVRVDEITDTTAQISWQEGTDNHSPVTAYTIQARTPFSVGWQRVTTVPDVIDGNTFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEIPPAEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFRPFGTTTWIQTVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSSITTVFSAEEEPTVAPSGVSVTSLSSSVIEVSWKAIPWKMSSGRLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNVVWNVTDSRVILNWEEVRAMENESEVTGYKVLYRTSGQNNMNVLNTDKTTAELLLQFNEDYIIEVKATTEGGDGTSSDQILIPRLASMDARGSGPSTLNIFSLSSILPTVFSFTLNSVL", "length": 928 }, "evidence": [ { "id": "F1SFM5", "url": "https://omabrowser.org/oma/group/F1SFM5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7EZG5-1", "protein_name": "Contactin-3", "gene_name": "cntn3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLLWKRLVALSIIGCLAVSLAQAEDAKFSGPSWKREPEDLILPIYSPQQEAVLSCEASGAPSPQYRWSLNGTLIDLGGDERRRLSGGNLIITGLDRDQDSGVYQCTAFNTRGTILSQRATLQFAYLENFKTQTRSAVNVREGQGVVLLCGTPLHSGELTFTWVFNEYPHFVQQDSRRFVSQETGNLYIAKVEPSDVGNYTCVVNNTITKERVFSSPTPLVLRNDGAMGEYEPKIELHFPDTIPAAKGSALKLECFALGNPVPRISWRRTSDVSFPNKVKLKNSNAILEIPSFQQEDTGTYECIAENSRGKNAARGRVSFHATPHWLQTMTDTAMSIEENLFWECKANGKPKPSYSWLKNGESLISEGRVQIENGALSIFSLNLSDGGMYQCVAENKHGIIYSSAELMVLASAPSFSQNPLSQTLKARSGSDVSLDCRPHASPRAISLWKRGTEILQRNERTFLFPNGTLKITNITKRDGGSYTCVAKNQFGTASTTGKLIITEPTRISQSPSSTEITVGESVVLPCQVTADPALDVAFSWAFNGQPIDFHQDADHFERVGGSFSGDLMIRNIQLNHGGKYVCLVDTDVESLSADAILVVKGPPSPPDMVVVEEVTDSTAQLSWSPGQDNGSPITGYAIQGRTPFTVGWQAVDTVPEVINGNTLTATVVGLNAWVEYEFRVLASNSVGMGEPSPPSTKIRTEDSMPDAAPTDVGGGGGTKSELVITWEPVPEELQNGEGFGYIIAFRPVGMVTWTRVVISAPSLTRYVFRNDTIPPFSPFNVKVGAFNNRGEGPFSTIATVFSAEEVPSIAPEKVSAKSLSAADIEVTWEPIASIPERVLGYEVVYWEDDTKPDTVGKVRITGNYTAVNVSGLQGNTQYYLAVCAFNTAGTGPQSAPVNITTKKPPPGQPPQNVEWNLIGSQLILQWDPVIALETESEVTGYIVLYRRHRNNDMYSIITNKTSAELTLNPNDNYVIQIKSLSEGGLGEGSEPIHIHQLSMGARGSRSGRLCSLSLSPLLICALSSLGAS", "length": 1029 }, "evidence": [ { "id": "F1SFM5", "url": "https://omabrowser.org/oma/group/F1SFM5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q07409-1", "protein_name": "Contactin-3", "gene_name": "Cntn3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLSWKQLILLSFIGCLAGELLLQGPVFIKEPSNSIFPVDSEDKKITLNCEARGNPSPHYRWQLNGSDIDTSLDHRYKLNGGNLIVINPNRNWDTGSYQCFATNSLGTIVSREAKLQFAYLENFKTRMRSTVSVREGQGVVLLCGPPPHSGELSYAWVFNEYPSFVEEDSRRFVSQETGHLYIAKVEPSDVGNYTCVVTSTVTNTRVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVRLECFALGNPVPQINWRRSDGMPFPNKIKLRKFNGMLEIQNFQQEDTGSYECIAENSRGKNVARGRLTYYAKPYWLQLLRDVEIAVEDSLYWECRASGKPKPSYRWLKNGDALVLEERIQIENGALTITNLNVTDSGMFQCIAENKHGLIYSSAELKVVASAPDFSRNPMKKMVQVQVGSLVILDCKPRASPRALSFWKKGDMMVREQARVSFLNDGGLKIMNVTKADAGTYTCTAENQFGKANGTTHLVVTEPTRIILAPSNMDVAVGESVILPCQVQHDPLLDIMFAWYFNGALTDFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAAELIVRGSPGPPENVKVDEITDTTAQLSWTEGTDSHSPVISYAVQARTPFSVGWQSVRTVPEVIDGKTHTATVVELNPWVEYEFRIVASNKIGGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVTSPDNPRYVFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNNGGEEESSRKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVHVLNTNKTSAELLLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNIHPLSGYMSVLLFFIVNALW", "length": 1028 }, "evidence": [ { "id": "F1SFM5", "url": "https://omabrowser.org/oma/group/F1SFM5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P232-1", "protein_name": "Contactin-3", "gene_name": "CNTN3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMFPWKQLILLSFIGCLGGELLLQGPVFIKEPSNSIFPVGSEDKKITLHCEARGNPSPHYRWQLNGSDIDMSMEHRYKLNGGNLVVINPNRNWDTGTYQCFATNSLGTIVSREAKLQFAYLENFKTKMRSTVSVREGQGVVLLCGPPPHSGELSYAWIFNEYPSFVEEDSRRFVSQETGHLYISKVEPSDVGNYTCVVTSMVTNARVLGSPTPLVLRSDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPIPQINWRRSDGLPFSSKIKLRKFSGVLEIPNFQQEDAGSYECIAENSRGKNVARGRLTYYAKPHWVQLIKDVEIAVEDSLYWECRASGKPKPSYRWLKNGAALVLEERTQIENGALTISNLSVTDSGMFQCIAENKHGLVYSSAELKVVASAPDFSKNPMKKLVQVQVGSLVSLDCKPRASPRALSSWKKGDVSVQEHERISLLNDGGLKIANVTKADAGTYTCMAENQFGKANGTTHLVVTEPTRITLAPSNMDVSVGESVILPCQVQHDPLLDIIFTWYFNGALADFKKDGSHFEKVGGSSSGDLMIRNIQLKHSGKYVCMVQTGVDSVSSAADLIVRGSPGPPENVKVDEITDTTAQLSWKEGKDNHSPVISYSIQARTPFSVGWQTVTTVPEVIDGKTHTATVVELNPWVEYEFRVVASNKIGGGEPSLPSEKVRTEEAVPEVPPSEVNGGGGSRSELVITWDPVPEELQNGEGFGYVVAFRPLGVTTWIQTVVTSPDTPRYVFRNESIVPYSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSQVSANSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNGGGKEESSSKMKVAGNETSARLRGLKSNLAYYTAVRAYNSAGAGPFSATVNVTTKKTPPSQPPGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLNTNKTSAELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSMDARGSTSAISNVHPMSSYMPIVLFLIVYVLW", "length": 1028 }, "evidence": [ { "id": "F1SFM5", "url": "https://omabrowser.org/oma/group/F1SFM5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SFM5", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "F1SFM5", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "F1SFM5", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 193, "end_pos": 195, "annotation": "n_glycosylation_sequon" }, { "start_pos": 377, "end_pos": 379, "annotation": "n_glycosylation_sequon" }, { "start_pos": 468, "end_pos": 470, "annotation": "n_glycosylation_sequon" }, { "start_pos": 489, "end_pos": 491, "annotation": "n_glycosylation_sequon" }, { "start_pos": 624, "end_pos": 626, "annotation": "n_glycosylation_sequon" }, { "start_pos": 65, "end_pos": 67, "annotation": "n_glycosylation_sequon" }, { "start_pos": 70, "end_pos": 72, "annotation": "n_glycosylation_sequon" }, { "start_pos": 765, "end_pos": 767, "annotation": "n_glycosylation_sequon" }, { "start_pos": 860, "end_pos": 862, "annotation": "n_glycosylation_sequon" }, { "start_pos": 895, "end_pos": 897, "annotation": "n_glycosylation_sequon" }, { "start_pos": 913, "end_pos": 915, "annotation": "n_glycosylation_sequon" }, { "start_pos": 931, "end_pos": 933, "annotation": "n_glycosylation_sequon" }, { "start_pos": 956, "end_pos": 958, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SFM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" }, { "id": "PS50853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 600, "end_pos": 698, "start_aa": "Pro", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SFM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFM5" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 26, "end_pos": 117, "start_aa": "Pro", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 193, "end_pos": 195 }, { "start_pos": 377, "end_pos": 379 }, { "start_pos": 468, "end_pos": 470 }, { "start_pos": 489, "end_pos": 491 }, { "start_pos": 624, "end_pos": 626 }, { "start_pos": 65, "end_pos": 67 }, { "start_pos": 70, "end_pos": 72 }, { "start_pos": 765, "end_pos": 767 }, { "start_pos": 860, "end_pos": 862 }, { "start_pos": 895, "end_pos": 897 }, { "start_pos": 913, "end_pos": 915 }, { "start_pos": 931, "end_pos": 933 }, { "start_pos": 956, "end_pos": 958 } ] }, "class_list": [], "section_stats": [ { "table_id": 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"ENSSSCT00000024414.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024414.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022280.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022280.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 162, "start_aa": "Thr", "end_pos": 162, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr162", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", 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"Reactome", "description": "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" }, { "id": "R-SSC-8953750", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8953750", "resource": "Reactome", "description": "Transcriptional Regulation by E2F6" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z893-1", "protein_name": "RING1 and YY1 binding protein", "gene_name": "RYBP", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "RFLGCICGLKRTGNLHGCAESAITQPAFKVIVKLHHKQQLPDLCEEGDFFFQKPRINSQLVAQQVAQQYATPPPPKKEKKEKVEKQDKEKPDKEKEISPSVTKKNTNKKTKPKSDIVKDPPSEANSIQSGNTTTKTSDSNHTSRPRLKNVDRSTAQQLAVTVGNVTVIITDFKEKTRSSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSRSSTPKGDMSAVNDESF", "length": 227 }, "evidence": [ { "id": "F1SFN1", "url": "https://omabrowser.org/oma/group/F1SFN1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0M3Z6-1", "protein_name": "RING1 and YY1 binding protein", 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"glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFT4", "url": "https://www.uniprot.org/uniprotkb/F1SFT4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:407242", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12398", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12398:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12398:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04979", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04979", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SFT7", "url": "https://www.uniprot.org/uniprotkb/F1SFT7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFT7-1", "url": "https://www.uniprot.org/uniprotkb/F1SFT7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKQESLGAAGSLKGASPGGATRDALGGIGGVEGGAGLPPGVIMVHGSGPPAHPGGTAVLDSGLHQHPGEVAGHSHGSGTHPGGFSPPFPGTSVSGTSNLGSGGPGMYNSGSIPRPGSTCTHPDKPCEDRPRSILKNSSSIMMHKSPRAERRKSQHWDEMNILATYHPADKDYGFMKVDEPSTPYHRLQDSEEDLLAGTSYAMTPEELAERLATMDDFCPKVLLYSDHKSFGSSDNFSKTQPSDFEKRRKAHYNEGKYLKAQKNLPLDPNKGSHVGGLGVSSASRGVMLDPELRPAERSGAGGLTRGVKDEIGLVARNHILEAKGGRKSQIDLRDSSDSPAFRSQSQVSATPVTEKEMELQRKEYYRKGRYLRCSPHPELEEDTEDEQQSSSANLNWVIESPVGTEVRLLDHKRSPPQDHRAPENSVKVTVTPVKPGPAPPFKDSGSQAMSGWCQWLVSKGLNWQSAEGSERDAGRHPNLPSQDQHRHETLRLRWTQEEETRQWKT", "length": 506, "header": "tr|F1SFT7-1|F1SFT7_PIG Isoform 1 of Protein phosphatase inhibitor 2 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=F1SFT7-1" }, "isoforms": [ { "isoform_ac": "F1SFT7-1", "url": "https://www.uniprot.org/uniprotkb/F1SFT7/entry#F1SFT7-1", "sequence": { "sequence": "MEKQESLGAAGSLKGASPGGATRDALGGIGGVEGGAGLPPGVIMVHGSGPPAHPGGTAVLDSGLHQHPGEVAGHSHGSGTHPGGFSPPFPGTSVSGTSNLGSGGPGMYNSGSIPRPGSTCTHPDKPCEDRPRSILKNSSSIMMHKSPRAERRKSQHWDEMNILATYHPADKDYGFMKVDEPSTPYHRLQDSEEDLLAGTSYAMTPEELAERLATMDDFCPKVLLYSDHKSFGSSDNFSKTQPSDFEKRRKAHYNEGKYLKAQKNLPLDPNKGSHVGGLGVSSASRGVMLDPELRPAERSGAGGLTRGVKDEIGLVARNHILEAKGGRKSQIDLRDSSDSPAFRSQSQVSATPVTEKEMELQRKEYYRKGRYLRCSPHPELEEDTEDEQQSSSANLNWVIESPVGTEVRLLDHKRSPPQDHRAPENSVKVTVTPVKPGPAPPFKDSGSQAMSGWCQWLVSKGLNWQSAEGSERDAGRHPNLPSQDQHRHETLRLRWTQEEETRQWKT", "length": 506, "header": "tr|F1SFT7-1|F1SFT7_PIG Isoform 1 of Protein phosphatase inhibitor 2 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=F1SFT7-1" }, "locus": { "chromosome": "12", "start_pos": 52684720, "end_pos": 52681604, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019526.4", "url": "https://www.ensembl.org/id/ENSSSCT00000019526.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019008.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019008.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFT7", "url": "https://www.uniprot.org/uniprotkb/F1SFT7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7GH48-1", "protein_name": "Uncharacterized protein LOC100760837 isoform X1", "gene_name": "LOC100760837", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKPESLASVSGLKAESPRGVPRPVPGGVRGIQTDTALPSGVALFRGSGPPLHSGGTVIRSPGPVRPSEGVVTPSSGPSPQLGEAAGSSLGSSKSPGTGTGVMRAPTPGPGEPKGYSSDSSPLSGSTFLHSQNSEERPRSILKNSSSILMKKTSSGEKKSQRWDEMNILATYHPADKDYGFMKADEPSTPYHRPQDEEDLSAGSSLKVTPESLAERFATMDNFLPKVLQYGDNKSSRTADNFAKTYSSDFDKQRKIHYSEGKFLKSQKNPLLANEDDSNGASASISGSNQSVMMDQKPRPLDKAWAGRLATGGKNEAVLVTDSHVLDTNDSATYRNQFPSASDSTTREHLNLHRKEYYSKGRYLRSCSHTEIGEDIEDEEQDSESWERQPGGGRTDRTSSLLGAPALISCYFQVLQV", "length": 417 }, "evidence": [ { "id": "F1SFT7", "url": "https://omabrowser.org/oma/group/F1SFT7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F7F907-1", "protein_name": "Protein phosphatase 1, regulatory (inhibitor) subunit 2 like 1", "gene_name": "Ppp1r2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEKPESLAPVSGLSTESPGGVPRAVPGGVRGIQTDTGLPSGVGSFRGPGSLLHSGNSVRSPGPTQPSEGAVTLNSGPGPYLREVASLGSSTSPATGTGATKASTPGPEEPKVYSSESSTHSGSSFTERPRSILKNSSSILIKKPSNSEKKSQRWDEMNILATYHPADKDYGFMKADEPRTPYHRLQDNDEDPSAESSLKVTPESVAERFATMDNFLPKVLQYGDNKNSKTTDNFTKTHSTDFDKHRKIHYSEGKYLKTPKNLPSATEEENTGAGASIGSSNQGVAVDLKSRPVEKGWAGRLATGVRKDGVSMADSYVLDTNDSATYKNQFPSASDSTVGELATLQRKEYYSKGRYLRSCSHPELGEDIEDEEQDISGSQVSSNCWAKGRRCRSPGSSEKEHGSNQNPPCWNGRRREPGPRQGSNSHCSGRQLAEVDENCGSSGLRKKNLDHGKCSHLGMG", "length": 460 }, "evidence": [ { "id": "F1SFT7", "url": "https://omabrowser.org/oma/group/F1SFT7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F1SFT7", "url": "https://www.uniprot.org/uniprotkb/F1SFT7" } ], "pmid": "" }, { "name": "regulation of signal transduction", "id": "GO:0009966", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009966", "evidence": [ { "database": "UniProtKB", "id": "F1SFT7", "url": "https://www.uniprot.org/uniprotkb/F1SFT7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein phosphatase inhibitor activity", "id": "GO:0004864", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004864", "evidence": [ { "database": "UniProtKB", "id": "F1SFT7", "url": "https://www.uniprot.org/uniprotkb/F1SFT7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 137, "end_pos": 139, "annotation": "n_glycosylation_sequon" }, { "start_pos": 236, "end_pos": 238, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SFT7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 506, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SFT7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SFT7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 137, "end_pos": 139 }, { "start_pos": 236, "end_pos": 238 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SFT8-1", "uniprot_ac": "F1SFT8", "uniprot_id": "F1SFT8_PIG", "mass": { "chemical_mass": 166453.0, "monoisotopic_mass": 166453.0 }, "refseq": {}, "gene_names": [ { "name": "NEURL4", "type": "recommended", "evidence": [ { "id": "F1SFT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFT8" } ] } ], "protein_names": [ { "name": "Neuralized-like protein 4", "type": "recommended", "evidence": [ { "id": "F1SFT8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFT8/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Promotes CCP110 ubiquitination and proteasome-dependent degradation. By counteracting accumulation of CP110, maintains normal centriolar homeostasis and preventing formation of ectopic microtubular organizing centers.", "evidence": [ { "database": "UniProtKB", "id": "F1SFT8", "url": "https://www.uniprot.org/uniprotkb/F1SFT8#function" }, { "database": "UniProtKB", "id": "ARBA00060334", "url": "https://www.uniprot.org/uniprotkb/ARBA00060334#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SFT8", "url": "https://www.uniprot.org/uniprotkb/F1SFT8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NEURL4", "url": "https://www.uniprot.org/uniprotkb/F1SFT8", "locus": { "chromosome": "12", "start_pos": 52667831, "end_pos": 52680189, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017941", "url": "https://www.ensembl.org/id/ENSSSCG00000017941" } ] } } ], "crossref": [ { "id": "ENSSSCG00000017941", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017941", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12887", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12887", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR006573", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006573", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037962", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037962", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12429", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12429", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12429:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12429:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07177", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07177", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SFT8", "url": "https://www.uniprot.org/uniprotkb/F1SFT8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFT8-1", "url": "https://www.uniprot.org/uniprotkb/F1SFT8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAGSGGSGGSGGGPGPGPGGGGGPGGSGSGPGSAGELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVLDFPSSATGLKGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCGVAATGLPARVWAVVDLYGKCTQITVLPPEPGFSPPTPIPTPPLEPSAPQDSALAEQGTSGDEAFMVSPAQARPETFPNSLESHNDFANMELSEVVSNAILSAYNGGLLNVNLSSPPAGEAPGPSGAATSPILTSNDALLFHEKCGTLIKLSNNNKTAERRRPLDEFNNGVVMTNRPLRDNEMFEIRIDKLVDKWSGSIEIGVTTHNPNNLEYPATMTNLQSGTIMMSGCGILTNGKGTRREYCEFSLDELQEGDHIGLTRKSNSALHFFINGIDQGVATPLTPPVVYGVVDLYGMAVKVTIVHNNNHSDRLRRNNAILRALSPEGALRRAAPAAQAEPERLLFHPNCGQKAAITHEGRTALRPHATDDFNHGVVLSSRALRDGEVFQVRIDKMVDKWAGSIEIGVTTHNPAYLQLPSTMTNLRSGTWMMTGNGVMHNGTTILDEYGHNLDRLKAGDTVGVVRREDGTLHFFVNGMTQGPAAWNVPPGVYAVVDLYGQAAQATIVDDVEVPPVPEPLPEGNNQASPSSPSSGAGGSDLRFHQLHGSNAVITNGGRTALRHNCRSEFNDAIVISNRALRDGELFEIVIQKMVDRWSGSIEAGVTAIRPEDLEFPNTMTDIDYDTWMLSGTAIMQDGNTMRNNYGCDLDALGTGARIGMMRTAKGDLHYFINGQDQGAACSGLPPGKEVYAVVDLYGQCVQVSITNATGPMDNSLATSNSATEKSFPLHSPVAGVAHRFHSTCGKNITLEEDGTRAVRAAGYAHGLVFSTKELKTEEVFEVKVEELDEKWAGSLRLGLTTLVPGDMGPGAGGGPGLPPSLPELRTKTTWMVSSCEVRRDGQLQRMNYGRNLERLGVGSRVGLRRGADDTMHILVDGEDMGPAATGIAKNVWAVLDLYGPVRSVSIVSSTRLDEPEGTQPPSPSSDTGSEGEEEDEGEEHGPEGQEQVAVMPTALEFLENHGKNILLSNGNRTATRVASYNQGIVVVNQPLVPQLLVQVRIDFLNRQWTSSLVLGVITCPPERLNFPASACALKRAAWLLRGRGVFHNGLKICEKFGPNLDTCPEGTILGLRLDGSGGLHLHINGLDQGVAVPDVPQPCHALVDLYGQCEQVTIVSPEPGAASGKSTGTQGDMEKADMVDGIKESVCWGPPPTASPLKSCEYHALCSRFQELLLLPEDYFLPPPKRSLCYCESCRKLRGDEAHRRRGEPPREYALPFGWCRFNLRVNPRLEAGTLTKKWHMAYHGSNVAAVRRVLDRGELGAGTASILSCRPLKGEPGGGFEEPGENCAPPREEQPPPVLLSPSLQYAGAETLASKVQFRDPKSQRTHQAQVAFQVCVRPGSYTPGPPSAALREPPDPHFSPAELEWVTKEKGATLLYALLVRVE", "length": 1554, "header": "tr|F1SFT8-1|F1SFT8_PIG Isoform 1 of Neuralized-like protein 4 OS=Sus scrofa OX=9823 GN=NEURL4 PE=4 SV=5 CANONICAL=F1SFT8-1" }, "isoforms": [ { "isoform_ac": "F1SFT8-1", "url": "https://www.uniprot.org/uniprotkb/F1SFT8/entry#F1SFT8-1", "sequence": { "sequence": 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] }, { "id": "PTHR47056:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47056:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00621", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00621", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-193648", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-416482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001182615", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001182615", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BDP5", "url": 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PE=4 SV=1 CANONICAL=F1SG02-1" }, "isoforms": [ { "isoform_ac": "A0A287BDP5-1", "url": "https://www.uniprot.org/uniprotkb/F1SG02/entry#A0A287BDP5-1", "sequence": { "sequence": "MEIPGPSARCPVQEQRARWERKRACTARELLETERRYQEQLGLVATYFVGILRAKGTLRPPERQALFGPWELIYRASQELLLHLEGGRWGQGLEDFCPHLELYTQFAANAERSWTTLQEQLKKNRRFRRFVRLQEGRPEFGGLQLQDLLPLPLQRLQQYENLAVALAENTGPNSPDQEQLARAARLISETAQRVHTIGQKQKNDQHLQRVQALLSGRQAKGLTSGRWFLRQGWLLVVPPQGKPRPRMFFLFSDALLMAKPRPPLHLLQSGTFACRALYPMAECQLQRVFGHSGGSCGGLLSEPEELEESYEFQSPGYLRDRSELGVQSNLL", "length": 331, "header": "tr|A0A287BDP5-1|A0A287BDP5_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 39 OS=Sus scrofa OX=9823 GN=ARHGEF39 PE=4 SV=3 CANONICAL=F1SG02-1" }, "locus": { "chromosome": "1", "start_pos": 236387604, "end_pos": 236384408, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050068.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050068.3" }, { "database": "Ensembl Peptide", "id": 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"ENSSSCP00000005707.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005707.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SG02", "url": "https://www.uniprot.org/uniprotkb/F1SG02" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100151987", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100151987", "resource": "KEGG Pathway" }, { "id": "R-SSC-193648", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "resource": "Reactome", "description": "NRAGE signals death through JNK" }, { "id": "R-SSC-416482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "resource": "Reactome", "description": "G alpha (12/13) signalling events" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "B0BN40-1", "protein_name": "Rho guanine nucleotide exchange factor 39", "gene_name": "Arhgef39", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/F1SG07" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RUSC2", "url": "https://www.uniprot.org/uniprotkb/F1SG07", "locus": { "chromosome": "1", "start_pos": 236322953, "end_pos": 236299344, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005308", "url": "https://www.ensembl.org/id/ENSSSCG00000005308" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005308", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005308", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17702", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17702", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100158062", "url": "https://www.ncbi.nlm.nih.gov/gene/100158062", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004012", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004012", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047342", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047342", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047343", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047343", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100158062", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158062", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FDHEWKL", "url": "https://omabrowser.org/oma/group/FDHEWKL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SG07", "url": "https://www.orthodb.org/?gene=F1SG07", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15591", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15591", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15591:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15591:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02759", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02759", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14604", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14604", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001927847", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001927847", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SG07", "url": "https://www.uniprot.org/uniprotkb/F1SG07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SG07-1", "url": "https://www.uniprot.org/uniprotkb/F1SG07-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPLFELSRMDSPPKLTGETLIVHHIPLVHCQVPDRQCCGGASGGSGSTRPNPFCPPELGLTQPDQDLGQADSLLYNSLHSAPGGSVRSTDSTKSRGRDGRGPGAPKRHNPFLLQEGVAEPGLGDQYDDSIGDITTQQSFHLHGAGKPTFHLSSFQLPPPAPRVGRPWGTTRSRAGVVEGQEQEPVTTLNTQQCSSSHCCRPELEAETMELDECGGPGGSGSGGGASDISGFSFDQEWKLSSDDSPRNPRFSGSGPQHCRCSSTSSQSEAADQSMGYVSDSSCNSSDGVLVTFSTLYNKMHGNSHANLNSAPQSCSDSSFCSHSDPGAFYLDLQPSPAESKMSCESHHPDSGGREGGYGCPHASSPELDANCNSYRPHCEPCPAVADLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSCSEEHTKISPAPGPGPDPGSSQPSEYYLFQKPEAQTEEQEAVGSAMEAAAPMGPNVIEGQVYTNTSPPNLSTGRQRSRSYDRSLERSPAVRLGSLERMLSCPVRLSEGPAALTVPGSPPRRVTSFAELAKGRKKAAGSGSPPLRVSVGDSSQEFSPIQEAQQDRVGPLDEGTHCSHSLPPMPLEPGMDLVGPEPWSTQVCQGPQSSEMTPAGLRAAGQGPLAQLMDPGPALPGSPANSHTQRDARARADGGGTESRPVLRYSKEQRPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYSLSGCNRVQQPAPLAVPNAQAPALAPSEESQAPTSRGARKAGPELETSRPSPLGSYSPIRSAGPFGPSTDSSASTSCSPPPEQAAATESPPLWSHSCPPAVRPATSQQPQKENQKILPLAEYRLHGTGSLPPLGSWRSSLSRAESLARGGGEGSMASRPSNANHLSPQALKWREYRRKNPLGPPGLSGSLDRRPQEARLARRNPIFEFPGSLSAVGHLNCRLNGQVVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGNSEAVSIDLLQKKGLVKAVNTAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHLVLKYLCPAVRAVLEDGLKAFVLDVIIGQRKNTPWSVVEASTQLGPSTKVLHGLYNKVSQFPELTSHTMRFNAFILGLLNIRSLEFWFNHLYNHEDIIQTHYQPWGFLNAAHTVCPGLFEELLLLLQPLALLPFSLDLLFQHRLLQSGQQQRQHKELLRVSQDLLLSAHSTLQLARSRGQEGPGDMDRAAHGERVKGVGAPEGGEDEEEEEETEAAGSSGRGRWARSGQAGWWYQLMQSSQVYIDGSTEGSRFPRGGSNSSSGSSSEKKKGAGSGGPPPREGVVEGAEACPAPEETLGRDRGWPFWMGSPPDSVLAELRRSREREGSAAPPAESEEGASEPSPGGIKWGHLFGSRKAQREARPTNRLPSDWLSLDKSMFQLVAQTVGARREPEPKESLQEPHSPALPSKSPCEVKALCHHLATGPGQLSFRKGDILRVLGPAGGDWLRCSRGPDTGLVPLAYVTLTPTPSPTPGSSQN", "length": 1513, "header": "tr|F1SG07-1|F1SG07_PIG Isoform 1 of AP-4 complex accessory subunit RUSC2 OS=Sus scrofa OX=9823 GN=RUSC2 PE=4 SV=1 CANONICAL=F1SG07-1" }, "isoforms": [ { "isoform_ac": "F1SG07-1", "url": "https://www.uniprot.org/uniprotkb/F1SG07/entry#F1SG07-1", "sequence": { "sequence": "MPLFELSRMDSPPKLTGETLIVHHIPLVHCQVPDRQCCGGASGGSGSTRPNPFCPPELGLTQPDQDLGQADSLLYNSLHSAPGGSVRSTDSTKSRGRDGRGPGAPKRHNPFLLQEGVAEPGLGDQYDDSIGDITTQQSFHLHGAGKPTFHLSSFQLPPPAPRVGRPWGTTRSRAGVVEGQEQEPVTTLNTQQCSSSHCCRPELEAETMELDECGGPGGSGSGGGASDISGFSFDQEWKLSSDDSPRNPRFSGSGPQHCRCSSTSSQSEAADQSMGYVSDSSCNSSDGVLVTFSTLYNKMHGNSHANLNSAPQSCSDSSFCSHSDPGAFYLDLQPSPAESKMSCESHHPDSGGREGGYGCPHASSPELDANCNSYRPHCEPCPAVADLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSCSEEHTKISPAPGPGPDPGSSQPSEYYLFQKPEAQTEEQEAVGSAMEAAAPMGPNVIEGQVYTNTSPPNLSTGRQRSRSYDRSLERSPAVRLGSLERMLSCPVRLSEGPAALTVPGSPPRRVTSFAELAKGRKKAAGSGSPPLRVSVGDSSQEFSPIQEAQQDRVGPLDEGTHCSHSLPPMPLEPGMDLVGPEPWSTQVCQGPQSSEMTPAGLRAAGQGPLAQLMDPGPALPGSPANSHTQRDARARADGGGTESRPVLRYSKEQRPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYSLSGCNRVQQPAPLAVPNAQAPALAPSEESQAPTSRGARKAGPELETSRPSPLGSYSPIRSAGPFGPSTDSSASTSCSPPPEQAAATESPPLWSHSCPPAVRPATSQQPQKENQKILPLAEYRLHGTGSLPPLGSWRSSLSRAESLARGGGEGSMASRPSNANHLSPQALKWREYRRKNPLGPPGLSGSLDRRPQEARLARRNPIFEFPGSLSAVGHLNCRLNGQVVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGNSEAVSIDLLQKKGLVKAVNTAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHLVLKYLCPAVRAVLEDGLKAFVLDVIIGQRKNTPWSVVEASTQLGPSTKVLHGLYNKVSQFPELTSHTMRFNAFILGLLNIRSLEFWFNHLYNHEDIIQTHYQPWGFLNAAHTVCPGLFEELLLLLQPLALLPFSLDLLFQHRLLQSGQQQRQHKELLRVSQDLLLSAHSTLQLARSRGQEGPGDMDRAAHGERVKGVGAPEGGEDEEEEEETEAAGSSGRGRWARSGQAGWWYQLMQSSQVYIDGSTEGSRFPRGGSNSSSGSSSEKKKGAGSGGPPPREGVVEGAEACPAPEETLGRDRGWPFWMGSPPDSVLAELRRSREREGSAAPPAESEEGASEPSPGGIKWGHLFGSRKAQREARPTNRLPSDWLSLDKSMFQLVAQTVGARREPEPKESLQEPHSPALPSKSPCEVKALCHHLATGPGQLSFRKGDILRVLGPAGGDWLRCSRGPDTGLVPLAYVTLTPTPSPTPGSSQN", "length": 1513, "header": "tr|F1SG07-1|F1SG07_PIG Isoform 1 of AP-4 complex accessory subunit RUSC2 OS=Sus scrofa OX=9823 GN=RUSC2 PE=4 SV=1 CANONICAL=F1SG07-1" }, "locus": { "chromosome": "1", "start_pos": 236322493, "end_pos": 236309037, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005846.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005846.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005701.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005701.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1503, "start_aa": "Thr", "end_pos": 1503, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1503", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1507, "start_aa": "Thr", "end_pos": 1507, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1507", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SG07", "url": "https://www.uniprot.org/uniprotkb/F1SG07" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100158062", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158062", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XWK0-1", "protein_name": "RUN and SH3 domain containing 2", "gene_name": "RUSC2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDSPPKLTGETLIVHHIPLVHCQVPDRQCCSVNKRTNPFCQPDLGITRTSTLPERDLSQTDSLVYSSFLQTSESSAEASDNKEGKARDLVVPSASKRHNPFLLSEGEDLSIFGDDLGQKSFHLHNSLMGGKPPFHLHELALPPFHLHDSNHIVKSWNMASRSGVVDGQEDKISSDDIQKRNNANRCHQATERMELDECSCNRGSSSSFSFDGGDQEWNQNTSESLRNHDALHSRTCSCSSSELQHCRCYSSSSQSEVIDQQMGYISDSSCNSSDGVLVNFSALYNKMNGHSRSNLNSANLSCDSSFCSHSDTGAFYLDLHSSPTESKMSCESHHPESSGKTCECHRSSSPVLDANCNSYHLHCEPCTSESSDLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSCSEDQTKGSPAQPTEYYLFRRPDLREEEGNVECSEEETKGETTENMIEGQVYVNVSPPNLNTSRQRSRSYDQNLDRSPGNRLGSLERMVSCPVKLSESPAIPIQSSPPKRVTSFAELAKGRKKNSTSPPLRCSGDSSLEFSPIPEAQRDCPTFLEERAHRSQSLPPMPFIHGLNRSCEGFCLNHPFGDRQALCSTKDSGPNETVSSGHGAGEQASLTLLTEADANFSGSSTSGHGQRDVRARADGGGTDSKPVVRYSKDQRPTTLPIQPFVFQHHFSKPPKARALHSHFASSLSQLYSLSSNRPASQQISSSSQNSAALAEQSAVAGGQAHGVLLTQRSADGAASLNDGCIKKTAPETTRPSPLGSYSPVRCNVPFFQSVDSSSSPTTERAGESQPPRSRSCPISASLLPTRSSPAVSAMQPTQVTKVDALRQNENPKPVPKKEAPLEPSPPFSEYRLHSRSLLPLSLSSVPMSRVGAQADPHWRRGSETSSSGPLSSMGGRPLNANHLSPQALKWREYRRRNPLGLDRVSGLPSLASSLDRRQQEPRLNRGNPIFEFPGTLNTSHFHCKLNGQSMRQLQLTYTDFFPDYFSLAEKPPAEFCLSPDGNTESISIDLLQKKGLVKAINTAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHLILKYLCPAVRDILSDGLKAYVLDMIIGQRRNIPWSVVEASTQLGPSTKLLHSLYSKISQYTELTNHTMRFNAFIFGLLNIRSLEFWFNHLYNHEDIILAHYQPVGFLCLSHSVCQPLFEELLLLLQPLSLLPFNLDLLFEHHLMQMGKEQQQQKELLRVKQDLLLSAHSTLQLMRTRGSSEDPDGCSTAPEACKVGGGDGGMSPGHSPERAASERVKGVGASCGDGDREEEQRKVRESMWEGKKDKQAGWWYQLMQSSQIYIEGSTEGSKFIRYEKKKALNSVPSSAESHETPPPREGVVEGAEACHVAEGSLEEKPKAASRPSPETVEEPLEKPQHVPGGEEVKERSWPFWMGSPPDSVVTELKRSKEKETGTQLKVGAAAAAPQEESSASASEGSQPIKWGHLFGSRKVQKEPRQPNRLPSGWLSLDKSVFQLVAQVGASMWRETAPEPDPPQPEPPEVSPAPQPARGLCANPPCEVKALCHHIATEEGQLSFNKGDILQVISKVDGDWLQCSLGSEKGLVPIMYVTHPEDEDY", "length": 1610 }, "evidence": [ { "id": "F1SG07", "url": "https://omabrowser.org/oma/group/F1SG07/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "M0RCV5-1", "protein_name": "AP-4 complex accessory subunit RUSC2", "gene_name": "Rusc2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPLLEISRMDSPPKLTGETLIVHHIPLVHCQVPDRQCCGGAGGGGRGTRANPFCPPELGLTQPDQDLGQADSLLYTSLHSAPGAPTRSSDGVKSRSRDGRGPGAPKRHNPFLVQEGVGETGLGDLHDGSTGDGATQQSFHLHSTSQPFHLSSFQLPPSGPGQGRPWGAARSRPGVVEGQEQDPATTLGTQCSNSHCCRPEPEAETMELDECGGHGGSGSGGGNNDISGFSFEQEWKLSSDESPRHPGRSGSGAQHCHCSSTSSQSEAADQSMGYVSDSSCNSSDGVLVTFSTLYNKMHGSPRANLNSVPQSCSDSSFCSHADPGAFYLDLQPSPAESRMSCESHHPESGDREEGCGCPHASSPELDANCNAYRPHCEPCPAVADLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSCSEEHTKISPPPGPGSDPDPSQPSEYYLFQKPEEQEAVGSSTEAATTMGPTVLEGQVYTNTSPPNLSTGRQRSRSYDRSLERSPAVRLGSLERMLSCPVRLSEGPGALAGPASPPRRVTSFAELAKGRKKAAGSGSPPLRVSIGESSQEFSPIQEAQQDRAGPLDEGTRCSHSLPSMPLGPSLDLLGPEPWSTQVCQDPQSSEMLLPSLRASGQGLLAQPMDPVPALLGSPANSHTQRDARARADGGGTESRPVLRYSKEQRPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYSLSGCSRAQQPAPLVISTAQGSAPAPSGEPQAFPSQTTGRGARNAGPEPETSRPSPLGSYSPVRSAGPFGSSTDSSASTSCSPPPEQATASESLRPWSHPCPPPVRPATSQQPRKEDQKIPTLAEYRLHGTGSLPPLGSWRSGFTRTESLARGGGEGSMASRPNNVNHLSPQALKWREYRRKNPLGPPGVSGSLDRRPQEARLAHRNPIFEFPGSFGTTNHLNCRLNGQIAKPLSLTCPDLQDPFSLTEKPPAEFCLSPDGNSEAVSIDILQKRGLVKAVNTAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHLVLKYLCPAVQAVLEDGLKAFVLDVIIGQRKNMPWSVVEASTQLGPSTKVLHGLYNKVSQFPELTSHTMRFNAFILGLLNIRSLEFWFNHLYDHEDIIQTHYQPWGFLRAAHTVCPGLFEELLLLLQPLALLPFSLDLLFQHRLLQNGRQQRQHKELLRVSQDLLLSAHSTLQLARARGQEGPGDVDRAAPGERVKGVGASEGGEEDEDDSEEVAVVPGSSDHGKWARGGQAGWWYQLMQSSQVYIEGTAEGSRFPRSSSSSSGGGEKKKGAGGGGPSQTPPPPPREGVVEGAEACPAPEEALGQERGWPFWMGSPPDSVLAELRRSREREGPVAPPTENEGTPEPSPGGIKWGHLFGSRKAQREARPTNRLPSDWLSLDKSVFQLVAQTMGARREPEPRENLQESHPPAVPSKPPCEVQALCHHLATGPGQLSFHKGDILRVLGPAGGDWLCCSRGPDTGLVPLAYVTLTPTPSSPGNSQN", "length": 1515 }, "evidence": [ { "id": "F1SG07", "url": "https://omabrowser.org/oma/group/F1SG07/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80U22-1", "protein_name": "AP-4 complex accessory subunit RUSC2", "gene_name": "Rusc2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSPPKLTGETLIVHHIPLVHCQVPDRQCCGGAGGGGGGTRANPFCPPELGLTQPDHDLGQADSLLYPSLHSAPGAPTGSSDSVKSRSRDGRGPGAPKRHNPFLVQEGVGETGLGDLHDSSTGDSVTQQSFHLHSASQPFHLSSFQLPPSGPGQGRPWGATHSRPGVVEGQEQDPATALGTQCSTSHCCRPELEAERMELDECGGHGGSGSGGGTSDISGFSFEQEWKISSDESPRHPGRSGSGTQHCHCSSTSSQSEAADQSMGYVSDSSCNSSDGVLVTFSTLYNKMHSSSRANLNSVPQSCSDSSFCSHADPGAFYLDLQPSPAESRMSCESHHPENGDREEGCGCPHVSSPELDANCNAYHPHSEPCPAVADLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSCSEEHTKISPPPGPCPDPDPNQPSEYYLFQKPDIQPEEQEAVGSPAEAATAMGPTVLEGQVYTNTSPPNLNTGRQRSRSYDRSLERSPPVRLGSLERMLSCPVRLSEGPAALAGPASPPRRVTSFAELAKGRKKAAGSGSPPLRASVGDSSQEFSPIQEAQQDRAAPLDEGTRCSHSLPSLPLGPSLDLLGPEPWSTPVCQGSQSSEMPLPSLRAAGQGPLAQLMDPGPAFSGSPATSHTQRDSRARADGGGTESRPVLRYSKEQRPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYSLSGCSRAQQPAPLVISTAQGPAPAPSGEPQPFTSQASGRGARNAGPEPETSRPSPLGSYSPVRSAGPFGSSTDSSASTSCSPPPEQGTAADSVSPWSHTCPPTVRPATSQQPPKEDQKIPTLAEYRLHGTGSLPPLGSWRSGFTRAESLVRGGGEGSMANRPNNANHLSPQALKWREYRRKNPLGPPGLSGSLDRRPPEARLARRNPIFEFPGSFGTTSHLNCRLNGQISKPLSLTCPDLQDPFSLTEKPPAEFCLSPDGNSEAISIDILQKKGLVKAVNTAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHLVLKYLCPAVQAVLEDGLKAFVLDVIIGQRKNMPWSVVEASTQLGPSTKVLHGLYNKVSQFPELTSHTMRFNAFILGLLNIRSLEFWFNHLYNHEDIIQTHYQPWGFLRAAHTVCPGLFEELLLLLQPLALLPFSLDLLFQHRLLQSGRQQRQHKELLRVSQDLLLSAHSTLQLARSRGQEGPGDMDRVAPGERVKGVGASEGGEEDEEDAEEVAVVAGSSDHGKWARGGQAGWWYQLMQSSQVYIDGTAEGSRFPRSSSSSSGSGSEKKKGVGSGGPSQAPPPPPREGVVEGAEACPAPEEALGQERGWPFWMGSPPDSVLAELRRSREREGPVAPPTENEEGTAEPSPGGIKWGHLFGSRKSQREARPTNRLPSDWLSLDKSVFQLVAQTMGARREPEPRENLQESHPPAVPSKPPCEVQALCHHLATGPGQLSFHKGDILRVLGPARGDWLRCSRGPDTGLVPLAYVTLPPTPSSPPGSSQN", "length": 1514 }, "evidence": [ { "id": "F1SG07", "url": "https://omabrowser.org/oma/group/F1SG07/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N2Y8-1", "protein_name": "AP-4 complex accessory subunit RUSC2", "gene_name": "RUSC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDSPPKLTGETLIVHHIPLVHCQVPDRQCCGGAGGGGGSTRPNPFCPPELGITQPDQDLGQADSLLFSSLHSTPGGTARSIDSTKSRSRDGRGPGAPKRHNPFLLQEGVGEPGLGDLYDDSIGDSATQQSFHLHGTGQPNFHLSSFQLPPSGPRVGRPWGTTRSRAGVVEGQEQEPVMTLDTQQCGTSHCCRPELEAETMELDECGGPGGSGSGGGASDTSGFSFDQEWKLSSDESPRNPGCSGSGDQHCRCSSTSSQSEAADQSMGYVSDSSCNSSDGVLVTFSTLYNKMHGTPRANLNSAPQSCSDSSFCSHSDPGAFYLDLQPSPFESKMSYESHHPESGGREGGYGCPHASSPELDANCNSYRPHCEPCPAVADLTACFQSQARLVVATQNYYKLVTCDLSSQSSPSPAGSSITSCSEEHTKISPPPGPGPDPGPSQPSEYYLFQKPEVQPEEQEAVSSSTQAAAAVGPTVLEGQVYTNTSPPNLSTGRQRSRSYDRSLQRSPPVRLGSLERMLSCPVRLSEGPAAMAGPGSPPRRVTSFAELAKGRKKTGGSGSPPLRVSVGDSSQEFSPIQEAQQDRGAPLDEGTCCSHSLPPMPLGPGMDLLGPDPSPPWSTQVCQGPHSSEMPPAGLRATGQGPLAQLMDPGPALPGSPANSHTQRDARARADGGGTESRPVLRYSKEQRPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYSLSGCSRTQQPAPLAAPAAQVSVPAPSGEPQASTPRATGRGARKAGSEPETSRPSPLGSYSPIRSVGPFGPSTDSSASTSCSPPPEQPTATESLPPWSHSCPSAVRPATSQQPQKEDQKILTLTEYRLHGTGSLPPLGSWRSGLSRAESLARGGGEGSMATRPSNANHLSPQALKWREYRRKNPLGPPGLSGSLDRRSQEARLARRNPIFEFPGSLSAASHLNCRLNGQAVKPLPLTCPDFQDPFSLTEKPPAEFCLSPDGSSEAISIDLLQKKGLVKAVNIAVDLIVAHFGTSRDPGVKAKLGNSSVSPNVGHLVLKYLCPAVRAVLEDGLKAFVLDVIIGQRKNMPWSVVEASTQLGPSTKVLHGLYNKVSQFPELTSHTMRFNAFILGLLNIRSLEFWFNHLYNHEDIIQTHYQPWGFLSAAHTVCPGLFEELLLLLQPLALLPFSLDLLFQHRLLQSGQQQRQHKELLRVSQDLLLSAHSTLQLARARGQEGPGDVDRAAQGERVKGVGASEGGEEEEEEEETEEVAEAAGGSGRARWARGGQAGWWYQLMQSSQVYIDGSIEGSRFPRGSSNSSSEKKKGAGGGGPPQAPPPREGVVEGAEACPASEEALGRERGWPFWMGSPPDSVLAELRRSREREGPAASPAENEEGASEPSPGGIKWGHLFGSRKAQREARPTNRLPSDWLSLDKSMFQLVAQTVGSRREPEPKESLQEPHSPALPSSPPCEVQALCHHLATGPGQLSFHKGDILRVLGRAGGDWLRCSRGPDSGLVPLAYVTLTPTPSPTPGSSQN", "length": 1516 }, "evidence": [ { "id": "F1SG07", "url": "https://omabrowser.org/oma/group/F1SG07/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SG07", "url": "https://www.uniprot.org/uniprotkb/F1SG07" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SG07", "url": "https://www.uniprot.org/uniprotkb/F1SG07" } ], "pmid": "" }, { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "F1SG07", "url": "https://www.uniprot.org/uniprotkb/F1SG07" } ], "pmid": "" } ] }, { "name": "Molecular Function", 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"https://www.uniprot.org/uniprotkb/F1SG07" }, { "id": "PS50826", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50826" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RUN", "eco_id": "ECO_0000259", "start_pos": 1032, "end_pos": 1176, "start_aa": "Asn", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SG07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SG07" }, { "id": "PS50002", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH3", "eco_id": "ECO_0000259", "start_pos": 1444, "end_pos": 1503, "start_aa": "Lys", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 1503, 1507 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1026, "end_pos": 1028 }, { "start_pos": 1294, "end_pos": 1296 }, { "start_pos": 283, "end_pos": 285 }, { "start_pos": 491, "end_pos": 493 }, { "start_pos": 496, "end_pos": 498 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SG73-1", "uniprot_ac": "F1SG73", "uniprot_id": "F1SG73_PIG", "mass": { "chemical_mass": 48285.0, "monoisotopic_mass": 48285.0 }, "refseq": { "ac": "XP_005653190", "name": "ras association domain-containing protein 8", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653190" }, "gene_names": [ { "name": "RASSF8", "type": "recommended", "evidence": [ { "id": "F1SG73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SG73" } ] }, { "name": "RASSF8", "type": "synonym", "evidence": [ { "id": "XP_005653190", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653190" } ] } ], "protein_names": [ { "name": "Ras association domain family member 8", "type": "synonym", "evidence": [ { "id": "F1SG73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SG73/entry#names_and_taxonomy" } ] }, { "name": "ras association domain-containing protein 8", "type": "synonym", "evidence": [ { "id": "XP_005653190", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653190" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SG73", "url": "https://www.uniprot.org/uniprotkb/F1SG73" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RASSF8", "url": "https://www.uniprot.org/uniprotkb/F1SG73", "locus": { "chromosome": "5", "start_pos": 47729751, "end_pos": 47847452, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000559", "url": "https://www.ensembl.org/id/ENSSSCG00000000559" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000559", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000559", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16134", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16134", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100151839", "url": "https://www.ncbi.nlm.nih.gov/gene/100151839", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000159", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000159", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033593", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033593", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048944", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048944", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048945", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048945", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100151839", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100151839", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VEIRYWE", "url": "https://omabrowser.org/oma/group/VEIRYWE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SG73", "url": "https://www.orthodb.org/?gene=F1SG73", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15286", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15286", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15286:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15286:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21712", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21712", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005653190", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005653190", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SG73", "url": "https://www.uniprot.org/uniprotkb/F1SG73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SG73-1", "url": "https://www.uniprot.org/uniprotkb/F1SG73-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPIISLNKWGQYASDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQIDKTIKRREPKRKSLTFTGGAKGLMDIFGKGKETEFKQKVLNNCKTTADELKKLIRLQTEKLQSIEKELESNEIEIRFWEQKYNSNLEEEIVRLEQKIKRNDVEIEEEEFWENELQIEQENEKQLKDQLQEIRQKITECESKLKDYLAQIQTMESGLEAEKLQREVQEAQVNEEEVKGKIGKVRGEIDIQGQQSLRLENGIKAVERSLGQATKRLQDKEQELEQLTKELRQVNLQQFIQQTGTKVTVLPAEPIEVEASHADIEREAPFQSGSLKRPGSSRQLPSNLRILQNPISAGFNPEGIYV", "length": 419, "header": "tr|F1SG73-1|F1SG73_PIG Isoform 1 of Ras association domain family member 8 OS=Sus scrofa OX=9823 GN=RASSF8 PE=4 SV=3 CANONICAL=F1SG73-1" }, "isoforms": [ { "isoform_ac": "F1SG73-1", "url": "https://www.uniprot.org/uniprotkb/F1SG73/entry#F1SG73-1", "sequence": { "sequence": "MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPIISLNKWGQYASDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQIDKTIKRREPKRKSLTFTGGAKGLMDIFGKGKETEFKQKVLNNCKTTADELKKLIRLQTEKLQSIEKELESNEIEIRFWEQKYNSNLEEEIVRLEQKIKRNDVEIEEEEFWENELQIEQENEKQLKDQLQEIRQKITECESKLKDYLAQIQTMESGLEAEKLQREVQEAQVNEEEVKGKIGKVRGEIDIQGQQSLRLENGIKAVERSLGQATKRLQDKEQELEQLTKELRQVNLQQFIQQTGTKVTVLPAEPIEVEASHADIEREAPFQSGSLKRPGSSRQLPSNLRILQNPISAGFNPEGIYV", "length": 419, "header": "tr|F1SG73-1|F1SG73_PIG Isoform 1 of Ras association domain family member 8 OS=Sus scrofa OX=9823 GN=RASSF8 PE=4 SV=3 CANONICAL=F1SG73-1" }, "locus": { "chromosome": "5", "start_pos": 47748116, "end_pos": 47733848, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038738.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038738.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042545.1", "url": "https://www.ensembl.org/id/ENSSSCP00000042545.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SG73", "url": "https://www.uniprot.org/uniprotkb/F1SG73" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100151839", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100151839", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K0F4-1", "protein_name": "Ras association domain family member 8", "gene_name": "Rassf8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPIVSLNKWGQYASDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQVDKSIRRREPKRKSLTFTGGAKGLTDIFGKGKETEFRQKVLSNCRATAEELTRLIRLQTGKLQAIEKQLESSEAEIRFWEQKYSCSLEEEIVRLEQRIKRNDVEIEEEEFWENELQIEQENEKQLQDQLEEMRQKVADCEGRLKDYLAQIHTMESGLQAEKLHREVQEAQVNEEEVKGKIEKVKGEVDLQGQQSLRLENGIRAVARSLGQATKRLQDKEQELEQLTKELRQVNLQQFIQQTGTKVTVLPAEPTEIEASQADIETEAPFPSGSLKRPGSSRQLPSNLRILQNPVSSGFNPEGIYV", "length": 419 }, "evidence": [ { "id": "F1SG73", "url": "https://omabrowser.org/oma/group/F1SG73/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q2U9R7-1", "protein_name": "Ras association domain family member 8", "gene_name": "RASSF8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPIVSLNKWGQYASDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQNDKAMKRREPKRKSLTFTGGAKGLMDIFGKSKESEFKQKVLNNCKTTADELKKLIHLQTEKLQCIEKQLESNEAEIRYWEQKYNASLEEEILKLEQKIKRNEVEIEEEEFWENELQIEQENEKQLKEQLQEMRQRILECEGKLKDYMSQIHNMESGLEAEKLHREVQESQVNEEEVKEKIEKVKGEIDIQGQQSLRLENGIKAVERSLGQATKRLQDREQELEQLTKELRQVNLQQFIQQTGTKVTVLPADPVEVEAPPVELEREPTFQSGSLKRPGSSRQLPSNLRILQNPLSSGFNPEGIYV", "length": 419 }, "evidence": [ { "id": "F1SG73", "url": "https://omabrowser.org/oma/group/F1SG73/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HXQ4-1", "protein_name": "Ras association domain-containing protein 8 isoform X1", "gene_name": "Rassf8", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MELKVWVDGVQRIVCGVTEVTTCQEVVIALAQAIGRTGRYTLIEKWRDTERHLAPHENPIISLNKWGQYASDVQLILRRTGPSLSERPTSDSVARIPERTLYRQSLPPLAKLRPQVDKSMKRREPKRKSLTFTGGAKGLMDIFGKGKEAEFRQKVLSNCRSTAEELRRLIRLQTDKLLAIEQQLESSETEIRFWEQKYNSSLEEEIVRLEQKIKRNDVEIEEEEFWENELQIEQENEKQLQDQLDEIRQKVTDCDSKLKDYLAQIQKMESGLEAEKLHLEVEEAQVNEEEMKGKIEKVRGEMDLQGQQSLRLENGIRAVERSLGQATKRLQDKEQELEQLTKELRQVNLQQFIQQTGTKVTVLPAEPTEIEASQADIETETPFQSGSLKRPGSSRQLPSNLRILQNPISSGFNPEGIYV", "length": 419 }, "evidence": [ { "id": "F1SG73", "url": "https://omabrowser.org/oma/group/F1SG73/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8CJ96-1", "protein_name": "Ras association domain-containing protein 8", "gene_name": "Rassf8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/F1SG79", "locus": { "chromosome": "5", "start_pos": 46784194, "end_pos": 46740949, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000553", "url": "https://www.ensembl.org/id/ENSSSCG00000000553" } ] } } ], "crossref": [ { "id": "F1SG79", "url": "https://alphafold.ebi.ac.uk/entry/F1SG79", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000553", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000553", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR025256", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025256", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042502", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042502", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR059229", "url": "https://www.ebi.ac.uk/interpro/entry/IPR059229", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15937", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15937", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15937:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15937:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13886", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13886", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25992", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25992", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27919", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27919", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SG79", "url": "https://www.uniprot.org/uniprotkb/F1SG79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SG79-1", "url": "https://www.uniprot.org/uniprotkb/F1SG79-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPALAAMGLLPLLVLAVLALEPGAASGAETVGNSSEGLLEFSVGKFRYFKLNRPFPEEAILRHISSNVTFLIFQLHSQYQNTTISFSEMLLPNASGTGTDKGLVFILRPEQSMCTWHLETLDSKPVQNVAIPLSYSERDPVPGGCNLEFDLDIDPNIYLQYNFFETTIKFAPANLGYARGTAPPPCDIETGQDSRWRLQYDVYQYFMPENDLTEEALLRHLQRMAEVPQVKANAVKVVTLTADDKTIVSFSSLWGQGVIYNVIVRDPFLNTSAAYVPVHTYACSFEAEEGNCFSLGRVSTKVFFTLFALLGLFICFFGHRFWKTELFFIGFILMGFFFYILITRLTPIKYDVRLILTALAGSIGGICLVAAWWRFGILVLCMLCVGLVLGFLVSSVTFFTPLGNLKIFRDDAVFWVTFSCIAVLIPVVFMGCLRILNILTCGFIGSYSVVLAIDSYLYTSLSYITLNVLKRALHVDFRRAFVNVPFQTNDFIVLAAWGMLAVSGITLQIRRERGQPFFPPHPYMLWKRERERRVTNILDPSYHIPPLRERLYGQLAQIKALFQKEQPAGERTPLLL", "length": 577, "header": "tr|F1SG79-1|F1SG79_PIG Isoform 1 of Transmembrane 7 superfamily member 3 OS=Sus scrofa OX=9823 GN=TM7SF3 PE=4 SV=2 CANONICAL=F1SG79-1" }, "isoforms": [ { "isoform_ac": "F1SG79-1", "url": "https://www.uniprot.org/uniprotkb/F1SG79/entry#F1SG79-1", "sequence": { "sequence": 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"id": "GO:0032024", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032024", "evidence": [ { "database": "UniProtKB", "id": "F1SG79", "url": "https://www.uniprot.org/uniprotkb/F1SG79" } ], "pmid": "" }, { "name": "negative regulation of programmed cell death", "id": "GO:0043069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043069", "evidence": [ { "database": "UniProtKB", "id": "F1SG79", "url": "https://www.uniprot.org/uniprotkb/F1SG79" } ], "pmid": "" }, { "name": "cellular response to unfolded protein", "id": "GO:0034620", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034620", "evidence": [ { "database": "UniProtKB", "id": "F1SG79", "url": "https://www.uniprot.org/uniprotkb/F1SG79" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 271, "end_pos": 273, "annotation": "n_glycosylation_sequon" }, { "start_pos": 34, "end_pos": 36, "annotation": "n_glycosylation_sequon" }, { "start_pos": 68, "end_pos": 70, "annotation": "n_glycosylation_sequon" }, { 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The BCR(KLHL42) E3 ubiquitin ligase complex mediates the ubiquitination and subsequent degradation of KATNA1. Involved in microtubule dynamics throughout mitosis.", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97#function" }, { "database": "UniProtKB", "id": "ARBA00053826", "url": "https://www.uniprot.org/uniprotkb/ARBA00053826#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLHL42", "url": "https://www.uniprot.org/uniprotkb/F1SG97", "locus": { "chromosome": "5", "start_pos": 45933928, "end_pos": 45954881, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000545", "url": "https://www.ensembl.org/id/ENSSSCG00000000545" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000545", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000545", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18319", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18319", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18478", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18478", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513858", "url": "https://www.ncbi.nlm.nih.gov/gene/100513858", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044727", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044727", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052392", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052392", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513858", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513858", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SDTWTVF", "url": "https://omabrowser.org/oma/group/SDTWTVF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SG97", "url": "https://www.orthodb.org/?gene=F1SG97", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46375", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46375", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46375:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46375:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8951664", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003126455", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126455", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SG97-1", "url": "https://www.uniprot.org/uniprotkb/F1SG97-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAEEMVQIRLEDRCYPVSKRKLIEQSDYFRALYRSGMREALSPEAGGPEVQQLRGLSAPGLRLVLDFINAGGAREGWLLGRRGEPGGGGEEEEDMDEVSLLSELVEAASFLQVTSLLRLLLSQVRLTNCLELYRLAQVYGLPDLQEACLRFMAVHFHEVLCKPQFHLLGSSPPAPGDVSLKQRLREARMTGTPVLVALGDFLGGPLAPHPYQGEPPSMLRYEEMTERWFPLANNLPPDLVNVRGYGSAILDNYLFIVGGYRITSQEISAAHSYNPSTNEWLQVASMNQKRSNFKLVAVNSKLYAIGGQAVSNVECYNPEQDAWNFMAPLPNPLAEFSACECQGKIYVIGGYTTRDRNMNILQYCPAADLWTLFETCDVHIRKQQMVSVEETIYIVGGCLHELGPTRRGSQSEDMLTVQSYNTATRQWLYLKENTSKSGLNLTCALHNDGIYIMSRDVTLSTSLEHRVFLKYNIFNDSWEAFRRFPAFGHNLLVSSLYLPNKAET", "length": 505, "header": "tr|F1SG97-1|F1SG97_PIG Isoform 1 of Kelch-like protein 42 OS=Sus scrofa OX=9823 GN=KLHL42 PE=4 SV=2 CANONICAL=F1SG97-1" }, "isoforms": [ { "isoform_ac": "F1SG97-1", "url": "https://www.uniprot.org/uniprotkb/F1SG97/entry#F1SG97-1", "sequence": { "sequence": "MSAEEMVQIRLEDRCYPVSKRKLIEQSDYFRALYRSGMREALSPEAGGPEVQQLRGLSAPGLRLVLDFINAGGAREGWLLGRRGEPGGGGEEEEDMDEVSLLSELVEAASFLQVTSLLRLLLSQVRLTNCLELYRLAQVYGLPDLQEACLRFMAVHFHEVLCKPQFHLLGSSPPAPGDVSLKQRLREARMTGTPVLVALGDFLGGPLAPHPYQGEPPSMLRYEEMTERWFPLANNLPPDLVNVRGYGSAILDNYLFIVGGYRITSQEISAAHSYNPSTNEWLQVASMNQKRSNFKLVAVNSKLYAIGGQAVSNVECYNPEQDAWNFMAPLPNPLAEFSACECQGKIYVIGGYTTRDRNMNILQYCPAADLWTLFETCDVHIRKQQMVSVEETIYIVGGCLHELGPTRRGSQSEDMLTVQSYNTATRQWLYLKENTSKSGLNLTCALHNDGIYIMSRDVTLSTSLEHRVFLKYNIFNDSWEAFRRFPAFGHNLLVSSLYLPNKAET", "length": 505, "header": "tr|F1SG97-1|F1SG97_PIG Isoform 1 of Kelch-like protein 42 OS=Sus scrofa OX=9823 GN=KLHL42 PE=4 SV=2 CANONICAL=F1SG97-1" }, "locus": { "chromosome": "5", "start_pos": 45954770, "end_pos": 45935565, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000588.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000588.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000575.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000575.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513858", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513858", "resource": "KEGG Pathway" }, { "id": "R-SSC-8951664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "resource": "Reactome", "description": "Neddylation" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A9Z3-1", "protein_name": "Kelch-like protein 42", "gene_name": "Klhl42", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAEEMVQIRLEDRCYPVSKSKLIEQSDYFRALYRSGMREAVRPEVGPEVQQLRGLSAPGLRLVLDFINAGGAREGWGLSEDELAEASVLAEMVEAASFLQVTALLRLLLSHVRLGNCLELYRLAQVYGLPDLQDACLRFMVLRFHQVLCQPQFPLLLSPPQAPGDCSLKQRLREARMRGTPVLVALGDFLGGPLAPHPYQGEPPSMLRYEETTERWFPLANNLPPDLVNVRGYGSAILDNYLFIVGGYRITSQEISAAHSYNPTTNEWLQVASMNQKRSNFKLVAVNSKLYAIGGQAVSNVECYNPEQDAWNFVAPLPNPLAEFSACECKGKIYVIGGYTTRDRNMNILQYCPSADLWTLFETCDVHIRKQQMVSVEETIYIVGGCLHELGSNRRSSQSEDMLTVQSYNTETRQWLYLKENTSKSGLNLTCALHNDGIYIMSRDVTLSTSLEHRVFLKYNIFADSWEAFRRFPAFGHNLLISSLYLPNKAET", "length": 493 }, "evidence": [ { "id": "F1SG97", "url": "https://omabrowser.org/oma/group/F1SG97/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MFH5-1", "protein_name": "Kelch-like protein 42", "gene_name": "KLHL42", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSADEMVQIRLEDRCYPVSKRKLIEQSDYFRALYRSGMREALSPEAGGPEVQQLRGLSAPGLRLVLDFINAGGAREGWLLGRRGEPGGGAEEEEEDMDEASLLSELVEAASFLQVTSLLQLLLSQVRLTNCLELYRLAQVYGLPDLQEACLRFMAVHFHEVLCKPQFHLLGSSPPAPGDVSLKQRLREARMTGTPVLVALGDFLGGPLAPHPYQGEPPSMLRYEEMTERWFPLANNLPPDLVNVRGYGAAILDNYLFIVGGYRITSQEISAAHSYNPSTNEWLQVASMNQKRSNFKLVAVNFKLYAIGGQAVSNVECYNPEQDAWNFVAPLPNPLAEFSACECKGKIYVIGGYTTRDRNLNILQYCPSADLWTLFETCDVHIRKQQMVSVEETIYIVGGCLHELGPTRRGSQSEDMLTVQSYNTATRQWLYLKENTSKSGLNLTCALHNDGIYIMSRDVTLSTSLEHRVFLKYNIFSDSWEAFRRFPAFGHNLLVSSLYLPNKTET", "length": 506 }, "evidence": [ { "id": "F1SG97", "url": "https://omabrowser.org/oma/group/F1SG97/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1P5X6-1", "protein_name": "Kelch-like protein 42", "gene_name": "KLHL42", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSIAERQRMEEEEGEGAGGGEEVVQIRLGDKCYPVCKRKLIEQSDYFRALYRSGMREAGQGQEEQLLRGGLSALGLELVLDFINTSCLARLEQEGEEEPPLLEELVEAASYLQVTPLLRLLLSQVRLGNCLELHHLAQIYGLQDLHDACLDFMASNYHQVLRRPDTRVHLHLPHALQQHLKERRMRGTATLVAIGDFMGTSSLGLSPGCHPQAEAPWSMLRYDEEAEQWLPLANNLPPDLVNVRGYGSAMLDNYLFIIGGYRITTSQEISAAHCYNPCLNEWSQLASMNQKRSNFKLLAVNGKLYAIGGQSLSNVECYNPENDWWNFVASMPNPLAEFSACECKGKIYVIGGYTTRDRNMNILQYCPTSDSWTNFELCDVHVRKQQMVSVEETIYLVGGCIHELGPNQKSSQSEDVLTVQSYNTATKEWLYLKENTSKSGLNLTCTLHNDGVYILSRDITLSTSLEHRVFLKYNIFTDSWESLRRFPAFGQNMLICSMYLPDV", "length": 503 }, "evidence": [ { "id": "F1SG97", "url": "https://omabrowser.org/oma/group/F1SG97/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8BFQ9-1", "protein_name": "Kelch-like protein 42", "gene_name": "Klhl42", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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{ "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "cell division", "id": "GO:0051301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051301", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "pmid": "" }, { "name": "regulation of microtubule-based process", "id": "GO:0032886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032886", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "pmid": "" }, { "name": "protein polyubiquitination", "id": "GO:0000209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000209", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-protein transferase activity", "id": "GO:0004842", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004842", "evidence": [ { "database": "UniProtKB", "id": "F1SG97", "url": "https://www.uniprot.org/uniprotkb/F1SG97" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 434, "end_pos": 436, "annotation": "n_glycosylation_sequon" }, { "start_pos": 441, "end_pos": 443, "annotation": "n_glycosylation_sequon" }, { "start_pos": 476, "end_pos": 478, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SGA5-1", "uniprot_ac": "F1SGA5", "uniprot_id": "F1SGA5_PIG", "mass": { "chemical_mass": 68350.0, "monoisotopic_mass": 68350.0 }, "refseq": { "ac": "XP_003132609", "name": "kelch-like protein 24 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132609" }, "gene_names": [ { "name": "KLHL24", "type": "recommended", "evidence": [ { "id": "F1SGA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ] }, { "name": "KLHL24", "type": "synonym", "evidence": [ { "id": "XP_003132609", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132609" } ] } ], "protein_names": [ { "name": "Kelch-like protein 24", "type": "recommended", "evidence": [ { "id": "F1SGA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGA5/entry#names_and_taxonomy" } ] }, { "name": "Kainate receptor-interacting protein for GluR6", "type": "synonym", "evidence": [ { "id": "F1SGA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGA5/entry#names_and_taxonomy" } ] }, { "name": "kelch-like protein 24 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003132609", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132609" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLHL24", "url": "https://www.uniprot.org/uniprotkb/F1SGA5", "locus": { "chromosome": "13", "start_pos": 121608139, "end_pos": 121570591, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011775", "url": "https://www.ensembl.org/id/ENSSSCG00000011775" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011775", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011775", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18253", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18253", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18463", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18463", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513048", "url": "https://www.ncbi.nlm.nih.gov/gene/100513048", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030596", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030596", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513048", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513048", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NDCYDPV", "url": "https://omabrowser.org/oma/group/NDCYDPV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SGA5", "url": "https://www.orthodb.org/?gene=F1SGA5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412:SF215", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412:SF215", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24681", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24681", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003132609", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132609", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGA5-1", "url": "https://www.uniprot.org/uniprotkb/F1SGA5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVLILGRRLNREDLGVRDSPATKRKVFEMDPKSLTGREFFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKNFALQTFEDVSQHEEFLELDKDELIDYICSDELVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINGRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCVGKLFVIGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRCITAVSLNNLIYVAGGLTKAIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATSIITGVAAMPRPVSYHGCVTIHRYNEKCFKL", "length": 600, "header": "tr|F1SGA5-1|F1SGA5_PIG Isoform 1 of Kelch-like protein 24 OS=Sus scrofa OX=9823 GN=KLHL24 PE=4 SV=3 CANONICAL=F1SGA5-1" }, "isoforms": [ { "isoform_ac": "F1SGA5-1", "url": "https://www.uniprot.org/uniprotkb/F1SGA5/entry#F1SGA5-1", "sequence": { "sequence": "MVLILGRRLNREDLGVRDSPATKRKVFEMDPKSLTGREFFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKNFALQTFEDVSQHEEFLELDKDELIDYICSDELVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINGRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCVGKLFVIGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRCITAVSLNNLIYVAGGLTKAIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATSIITGVAAMPRPVSYHGCVTIHRYNEKCFKL", "length": 600, "header": "tr|F1SGA5-1|F1SGA5_PIG Isoform 1 of Kelch-like protein 24 OS=Sus scrofa OX=9823 GN=KLHL24 PE=4 SV=3 CANONICAL=F1SGA5-1" }, "locus": { "chromosome": "13", "start_pos": 121603194, "end_pos": 121576444, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051700.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051700.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043413.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043413.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513048", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513048", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q2U665-1", "protein_name": "Kelch-like protein 24", "gene_name": "KLHL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLILGRRLNREDSGIRDSPATKRKVFEMDPKSLSGPEFFDFSSGSSHAESILQIFNEFRDSRLFTDVIICVEGREFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMDCFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCRNFALQTFEDVSQHEEFLELGKDELIDYICSDELVITKEEMVFEAVMRWVYRAVELRRPVLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCVGKLFVIGGGPDDNTCSDKVQSYDPDTNSWLLRATIPIAKRCITAVSLNNLIYVAGGLTKAIYCYDPIEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATGIITGVAAMPRPVSYHGCVTIHRYNEKGFKL", "length": 600 }, "evidence": [ { "id": "F1SGA5", "url": "https://omabrowser.org/oma/group/F1SGA5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BKJ8-1", "protein_name": "Kelch-like protein 24", "gene_name": "KLHL24", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVLILGRRLNREDLGVRDSPATKRKVFEMDPKSLTGREFFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKNFALQTFEDVSQHEEFLELDKDELIDYICSDELVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINGRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCVGKLFVIGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRCITAVSLNNLIYVAGGLTKAIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATSIITGVAAMPRPVSYHGCVTIHRYNEKCFKL", "length": 600 }, "evidence": [ { "id": "F1SGA5", "url": "https://omabrowser.org/oma/group/F1SGA5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3I3I7-1", "protein_name": "Kelch-like protein 24", "gene_name": "Klhl24", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVLILGRRLNREDLGVRDSPATKRKVFEMDPKSLTGHEYFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKTFALQTFEDVSQHEEFLELDKDELIDYICSDELVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCIGKLFVIGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRCITAVSLNNLIYVAGGLTKAVYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATSIITGVAAMPRPVSYHGCVTIHRYNEKCFKL", "length": 600 }, "evidence": [ { "id": "F1SGA5", "url": "https://omabrowser.org/oma/group/F1SGA5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q56A24-1", "protein_name": "Kelch-like protein 24", "gene_name": "Klhl24", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVLILGRRLNREDLGVRDSPATKRKVFEMDPKSLTGHEYFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKTFALQTFEDVSQHEEFLELDKDELIDYICSDELVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCIGKLFVIGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRCITAVSLNNLIYVAGGLTKAVYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATSIITGVAAMPRPVSYHGCVTIHRYNEKCFKL", "length": 600 }, "evidence": [ { "id": "F1SGA5", "url": "https://omabrowser.org/oma/group/F1SGA5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6TFL4-1", "protein_name": "Kelch-like protein 24", "gene_name": "KLHL24", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVLILGRRLNREDLGVRDSPATKRKVFEMDPKSLTGHEFFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKNFALQTFEDVSQHEEFLELDKDELIDYICSDELVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCVGKLFVIGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRCITAVSLNNLIYVAGGLTKAIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATSIITGVAAMPRPVSYHGCVTIHRYNEKCFKL", "length": 600 }, "evidence": [ { "id": "F1SGA5", "url": "https://omabrowser.org/oma/group/F1SGA5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BRG6-1", "protein_name": "Kelch-like protein 24", "gene_name": "Klhl24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLILGRRLNREDLGVRDSPATKRKVFEMDPKSLTGHEYFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKTFALQTFEDVSQHEEFLELDKDELIDYICSDELVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCIGKLFVIGGGPDDNTCSDKVQSYDPETNSWLLRAAIPIAKRCITAVSLNNLIYVAGGLTKAVYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATSIITGVAAMPRPVSYHGCVTIHRYNEKCFKL", "length": 600 }, "evidence": [ { "id": "F1SGA5", "url": "https://omabrowser.org/oma/group/F1SGA5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" }, { "name": "adherens junction", "id": "GO:0005912", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005912", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" }, { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" }, { "name": "perikaryon", "id": "GO:0043204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043204", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" }, { "name": "desmosome", "id": "GO:0030057", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030057", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" }, { "name": "intermediate filament organization", "id": "GO:0045109", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045109", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" }, { "name": "protein autoubiquitination", "id": "GO:0051865", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051865", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "F1SGA5", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SGA5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGA5" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 66, "end_pos": 133, "start_aa": "Thr", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SGB1-1", "uniprot_ac": "F1SGB1", "uniprot_id": "F1SGB1_PIG", "mass": { "chemical_mass": 120473.0, "monoisotopic_mass": 120473.0 }, "refseq": {}, "gene_names": [ { "name": "OVCH1", "type": "recommended", "evidence": [ { "id": "F1SGB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGB1" } ] } ], "protein_names": [ { "name": "Ovochymase 1", "type": "synonym", "evidence": [ { "id": "F1SGB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGB1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SGB1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OVCH1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1", "locus": {} } ], "crossref": [ { "id": "F1SGB1", "url": "https://alphafold.ebi.ac.uk/entry/F1SGB1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000540", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000540", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00041", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00041", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00190", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00190", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000859", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000859", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001254", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001254", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001314", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001314", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009003", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009003", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018114", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018114", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035914", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035914", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24252", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24252", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24252:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24252:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00089", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00089", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00431", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00431", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SGB1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGB1-1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWTQPGAGSLLTEVTHMLSHTGLRCQVHAVDLKSKETTLETGFFSGIGSWRNSTVGEHPWQVSLKLREHLFCGGSLIQGDLVVTAAHCLAGLEKQMKSLMVTAGEYSLFQKDKEEQNIPVSEIIIHPEYNRFGYRSFDIALLYLKHKAKFGTTVQPICIPQRGDTFEEGIPCKASGWGKISETSEYPNVLQEVELPIMDDRTCNPMLKSTNLASLGRTMLCAGFPDGEQDACQGDSGGLLVCRREDGVWVLAGITCWGVSCVRGWNPLRNKQRRTSPGIFSKVSALMDFIIQIMVTGGLCIWKIIVPENKIILIKFTSLYIENQVECDHDYVSLQSSNGVLISKVCGNTLPSPLLTEANEATVTFVTDAENSGSGFEFTFTAVQKNSEAGSSCGSVAVLVEEGMIHSAGYPDLYPSNVECHWFIHAPERHVIKLAFEDFSIEFNQNCYDAVVIYGDPEEKHELAKLCGILNPAPVFSPGNMMAIHFKSDGENNFRGFKARVTFLLSGESLGKECILNYFSWMGRWFDLLAVGVCGLPPFGPQWLSRRIRGGQEACPHCWPWQVGLRFLGNHQCGGAIINPVWILTAAHCVQWKNNPLFWTVVAGDHDRTLEESTEQVRRAKRIVVHEDFDAVTYDSDIALIQLSSALEFNSVVRPVCLPHRMEPPFSSEICVVTGWGSISEDGDLASRLQQIQVPVLEREFCERTYYSAHPGGISEKMICAGFAASGGKDIGQGDSGGPLVCKHEKGPFVLYGIVSWGAGYAQPRKPDVFSRVSVFLEWIQSKIKGHALLQINNENETLQRQQLPPPTASTDASGPGCYSEAELQEPRGFFSSPLYPLDYQGKLECSWVLRVLPNSMAKFTVEYLSLPKSHMCQDSALTIYEENHSERKMSGELCGRRLYPMIFMSSGPLVRVTFHSHVQGAFGIRYIVFRVQGPKGGKRTRFLQSSNQELVVTCEDALLTKPAGIIQIPRYFQRTTRSCHWRLLAPLNHIIRLDVINFQLKPVPLACQGHLTFYIQYFSWPFPNGSIMALPLSLLHWRKRKKQHRERLSLQRKQICFQESYPIFKSLWPNVSLAHT", "length": 1077, "header": "tr|F1SGB1-1|F1SGB1_PIG Isoform 1 of Ovochymase 1 OS=Sus scrofa OX=9823 GN=OVCH1 PE=4 SV=4 CANONICAL=F1SGB1-1" }, "isoforms": [ { "isoform_ac": "F1SGB1-1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1/entry#F1SGB1-1", "sequence": { "sequence": "MWTQPGAGSLLTEVTHMLSHTGLRCQVHAVDLKSKETTLETGFFSGIGSWRNSTVGEHPWQVSLKLREHLFCGGSLIQGDLVVTAAHCLAGLEKQMKSLMVTAGEYSLFQKDKEEQNIPVSEIIIHPEYNRFGYRSFDIALLYLKHKAKFGTTVQPICIPQRGDTFEEGIPCKASGWGKISETSEYPNVLQEVELPIMDDRTCNPMLKSTNLASLGRTMLCAGFPDGEQDACQGDSGGLLVCRREDGVWVLAGITCWGVSCVRGWNPLRNKQRRTSPGIFSKVSALMDFIIQIMVTGGLCIWKIIVPENKIILIKFTSLYIENQVECDHDYVSLQSSNGVLISKVCGNTLPSPLLTEANEATVTFVTDAENSGSGFEFTFTAVQKNSEAGSSCGSVAVLVEEGMIHSAGYPDLYPSNVECHWFIHAPERHVIKLAFEDFSIEFNQNCYDAVVIYGDPEEKHELAKLCGILNPAPVFSPGNMMAIHFKSDGENNFRGFKARVTFLLSGESLGKECILNYFSWMGRWFDLLAVGVCGLPPFGPQWLSRRIRGGQEACPHCWPWQVGLRFLGNHQCGGAIINPVWILTAAHCVQWKNNPLFWTVVAGDHDRTLEESTEQVRRAKRIVVHEDFDAVTYDSDIALIQLSSALEFNSVVRPVCLPHRMEPPFSSEICVVTGWGSISEDGDLASRLQQIQVPVLEREFCERTYYSAHPGGISEKMICAGFAASGGKDIGQGDSGGPLVCKHEKGPFVLYGIVSWGAGYAQPRKPDVFSRVSVFLEWIQSKIKGHALLQINNENETLQRQQLPPPTASTDASGPGCYSEAELQEPRGFFSSPLYPLDYQGKLECSWVLRVLPNSMAKFTVEYLSLPKSHMCQDSALTIYEENHSERKMSGELCGRRLYPMIFMSSGPLVRVTFHSHVQGAFGIRYIVFRVQGPKGGKRTRFLQSSNQELVVTCEDALLTKPAGIIQIPRYFQRTTRSCHWRLLAPLNHIIRLDVINFQLKPVPLACQGHLTFYIQYFSWPFPNGSIMALPLSLLHWRKRKKQHRERLSLQRKQICFQESYPIFKSLWPNVSLAHT", "length": 1077, "header": "tr|F1SGB1-1|F1SGB1_PIG Isoform 1 of Ovochymase 1 OS=Sus scrofa OX=9823 GN=OVCH1 PE=4 SV=4 CANONICAL=F1SGB1-1" }, "locus": { "chromosome": "5", "start_pos": 44288599, "end_pos": 44227573, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000582.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000582.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000569.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000569.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 808, "start_aa": "Thr", "end_pos": 808, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr808", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SGB1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "F1SGB1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SGB1", "url": "https://www.uniprot.org/uniprotkb/F1SGB1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1025, "end_pos": 1027, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1071, "end_pos": 1073, "annotation": "n_glycosylation_sequon" }, { "start_pos": 52, "end_pos": 54, "annotation": 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14667:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14667:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00118", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00118", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003481713", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481713", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SGD6", "url": "https://www.uniprot.org/uniprotkb/F1SGD6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGD6-1", "url": "https://www.uniprot.org/uniprotkb/F1SGD6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVVGSVRAALQVAEVLETIVSCCLGPEGRQILCTKPTGEVLLSRDGGLLLKALHLEHPIARMMVACVSSHLRKTGDGAKTFIIFLCHLLREFHAITDKEKDSLFFKNIQTHGRHWKNCCQWKFISQALLTFQTQVLDYVMDHYLSRHFLSIFSSSTKKRTLCRSSLEMLLEAFFCGRVGRNNHTFISQLMCDYFFNCMSCESEFEEVFELVDDCFVELKVGVTGLPVSDSRIIAGLVLHRDFSVYCPADGDIRIVIVTETIQPLFSTSGSEFILNSEQQFQTSQFWIKEKTKAIVKHLQSENVRLLLSSVKQPDLVIYYARLNGISVVECLSSEELSLIQKVTGIAPFVLPQASSQYEISNTALVKFCKPLILRSKRYVHLGLISTCSFIPHCIVLCGPVQGLVEQHEGALHGAFKMLRQLFKDLNLNYVTRASDQNCTSSTNVYKNSRERNQLSEIVNSSVQRPYQGTVVKNEDELAKTHSYSKVCSNLVVPGIELETYIPCSIPEVMPANTYQTDETLRYLSPDKAKIIDDHEPFIESDSANSRTENTRIEISFENVQVTKIAEKRSILPVRYKSLEMSASQSYCFSCIPAGCVLPVGGNFEILLHYYLLNYAKKFQQSEETMVSIIIANALLGIPKTLYKSKKGNKCFPQIYTRALHALQTNQPMVSNPAGLESVAGKYQLLTSVLQCLTNILTIDLVINIKRLPQEIYDEDSEEEL", "length": 721, "header": "tr|F1SGD6-1|F1SGD6_PIG Isoform 1 of Bardet-Biedl syndrome 10 OS=Sus scrofa OX=9823 GN=BBS10 PE=4 SV=3 CANONICAL=F1SGD6-1" }, "isoforms": [ { "isoform_ac": "F1SGD6-1", "url": "https://www.uniprot.org/uniprotkb/F1SGD6/entry#F1SGD6-1", "sequence": { "sequence": "MAVVGSVRAALQVAEVLETIVSCCLGPEGRQILCTKPTGEVLLSRDGGLLLKALHLEHPIARMMVACVSSHLRKTGDGAKTFIIFLCHLLREFHAITDKEKDSLFFKNIQTHGRHWKNCCQWKFISQALLTFQTQVLDYVMDHYLSRHFLSIFSSSTKKRTLCRSSLEMLLEAFFCGRVGRNNHTFISQLMCDYFFNCMSCESEFEEVFELVDDCFVELKVGVTGLPVSDSRIIAGLVLHRDFSVYCPADGDIRIVIVTETIQPLFSTSGSEFILNSEQQFQTSQFWIKEKTKAIVKHLQSENVRLLLSSVKQPDLVIYYARLNGISVVECLSSEELSLIQKVTGIAPFVLPQASSQYEISNTALVKFCKPLILRSKRYVHLGLISTCSFIPHCIVLCGPVQGLVEQHEGALHGAFKMLRQLFKDLNLNYVTRASDQNCTSSTNVYKNSRERNQLSEIVNSSVQRPYQGTVVKNEDELAKTHSYSKVCSNLVVPGIELETYIPCSIPEVMPANTYQTDETLRYLSPDKAKIIDDHEPFIESDSANSRTENTRIEISFENVQVTKIAEKRSILPVRYKSLEMSASQSYCFSCIPAGCVLPVGGNFEILLHYYLLNYAKKFQQSEETMVSIIIANALLGIPKTLYKSKKGNKCFPQIYTRALHALQTNQPMVSNPAGLESVAGKYQLLTSVLQCLTNILTIDLVINIKRLPQEIYDEDSEEEL", "length": 721, "header": "tr|F1SGD6-1|F1SGD6_PIG Isoform 1 of Bardet-Biedl syndrome 10 OS=Sus scrofa OX=9823 GN=BBS10 PE=4 SV=3 CANONICAL=F1SGD6-1" }, "locus": { "chromosome": "5", "start_pos": 39566264, "end_pos": 39563672, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000565.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000565.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000554.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000554.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SGD6", "url": "https://www.uniprot.org/uniprotkb/F1SGD6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100737698", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737698", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F7EKF1-1", "protein_name": "Bardet-Biedl syndrome 10", "gene_name": "Bbs10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQGSVTAALRVAEVLETIANRCVGPEGGLVLCTKPTGEVLLSRDGGCLLEALHLEHPLARMIVACVSSHLKKTGDGAKTFIIFLCHLLRGLHAIGEKEKDSFTSEDIQSHERHWKNCCQWKSISRALLRFQTQTLGCIVDQHLSRHYLSAFSSSAEGRTLCRRSLELLLEPYFCGRVGRNNHRFISQLMCDYVFKCMACESGIEVFEFLDNCFVELNVGVTGLPVSESRIVDGLVLPRDFSVYCPADGGIRMVIVTEILQPLFSSSSSEFVLDSETQFQASQSWIMDRTKTVMNHLRSHNVKLLLSSVKQPDLVTYCARLNSISVVECLSSEEVSLVQRITGLSPCVLPELASQCHIADSALVRFCKPLIVRSGRYAHLGLVSTCAFVPHCVVLCGPVLGLVQQHESAFHGAFKMLRQLFTDLDLNCMIQTKERRNPSPLADSSNRESSHSPKTGKYQDVVAKNKDKLETQTRLEVYPRLGASDTELITCKLWSAHKETSIDPSQTNEIPKRLSPEKSRIVDNCEVFLENNPTGNPTAEDTRTEMSFKHLQVADNPGEGYTLPVTYKSPDTCPSQAHCSSAVPAGCVLPVGGHFEILMHFYLLNYAKQCRQSDDAVISMLIANALLGVPKILYKPKKGKDSFPHIYTRALRALQTRQPIVSGQSGFESVAGKYQLLTSVLQCLMKILTIDLIINVKRQPQKTGDQESEDEL", "length": 713 }, "evidence": [ { "id": "F1SGD6", "url": "https://omabrowser.org/oma/group/F1SGD6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8TAM1-1", "protein_name": "BBSome complex assembly protein BBS10", "gene_name": "BBS10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLSSMAAAGSVKAALQVAEVLEAIVSCCVGPEGRQVLCTKPTGEVLLSRNGGRLLEALHLEHPIARMIVDCVSSHLKKTGDGAKTFIIFLCHLLRGLHAITDREKDPLMCENIQTHGRHWKNCSRWKFISQALLTFQTQILDGIMDQYLSRHFLSIFSSAKERTLCRSSLELLLEAYFCGRVGRNNHKFISQLMCDYFFKCMTCKSGIGVFELVDDHFVELNVGVTGLPVSDSRIIAGLVLQKDFSVYRPADGDMRMVIVTETIQPLFSTSGSEFILNSEAQFQTSQFWIMEKTKAIMKHLHSQNVKLLISSVKQPDLVSYYAGVNGISVVECLSSEEVSLIRRIIGLSPFVPPQAFSQCEIPNTALVKFCKPLILRSKRYVHLGLISTCAFIPHSIVLCGPVHGLIEQHEDALHGALKMLRQLFKDLDLNYMTQTNDQNGTSSLFIYKNSGESYQAPDPGNGSIQRPYQDTVAENKDALEKTQTYLKVHSNLVIPDVELETYIPYSTPTLTPTDTFQTVETLTCLSLERNRLTDYYEPLLKNNSTAYSTRGNRIEISYENLQVTNITRKGSMLPVSCKLPNMGTSQSYLSSSMPAGCVLPVGGNFEILLHYYLLNYAKKCHQSEETMVSMIIANALLGIPKVLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVMGKYQLLTSVLQCLTKILTIDMVITVKRHPQKVHNQDSEDEL", "length": 723 }, "evidence": [ { "id": "F1SGD6", "url": "https://omabrowser.org/oma/group/F1SGD6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9DBI2-1", "protein_name": "BBSome complex assembly protein BBS10", "gene_name": "Bbs10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQGSVTAALRVAEVLESIANRCVGPEGGQVLCTKPTGEVLLSRDGGCLLEALHLEHPLARMIVACVSSHLKKTGDGAKTFIIFLCHLLRGLHAIGEKGKDSFTSENIQSHERHWKNCCQWKSISQALQTFQTQTLGCIVDRSLSRHYLSVFSSSTEGRKLCRHSLELLLEAYFCGRVGRNNHRFISQLMCDYVFKCMACESGVEVFELLDHCFAELNVGVTGLPVSDSRIIDGLVLPRDFSMYCPADGDIRMVIVTEILQPQFSSAGSEFVLNSETQFQASQCWITDRTKTVMNHLRGQNVKLLLTSVKQPDLVIYCARLNSISVVECLSAEEVSLVQRITGLSPCVLPEVASQCEISDSTLVKFCKPLILRSKRYVHLGLISTCAFIPHSMVLCGPVLGLVEQHERAFHGAFKMLRQLFTDLDLNYIIQTKQQCNPSPLAYDNSRERNHSPETDKYQDIVAKSKNKLETQTHLEVYSGLGASDTELRAGKPWSAHKKTPIAPSQTDEMLKCLPPERSGIIDNCDLSIENHSTGNPTAEDTGTEISFEHLQVSDNAGKGYTLPVMRKSLDTCTCQGYCSSTVPAGCVLPVGGSFEILMSYYLLSYAKQCRQSDETVISMLIADALLGIPKILYKPKKGKDSFPHIYMRSLHALQASQPMVSGQSGFESVAGKYQLLTSVLQCLMKILTIDLIINIKRQPQKTADQESEDEF", "length": 713 }, "evidence": [ { "id": "F1SGD6", "url": 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"https://www.ncbi.nlm.nih.gov/protein/XP_003122944" } ] } ], "function": [ { "annotation": "Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system.", "evidence": [ { "database": "UniProtKB", "id": "F1SGP0", "url": "https://www.uniprot.org/uniprotkb/F1SGP0#function" }, { "database": "UniProtKB", "id": "ARBA00057840", "url": "https://www.uniprot.org/uniprotkb/ARBA00057840#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SGP0", "url": "https://www.uniprot.org/uniprotkb/F1SGP0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MPPED2", "url": "https://www.uniprot.org/uniprotkb/F1SGP0", "locus": { "chromosome": "2", "start_pos": 30221003, "end_pos": 30040362, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013327", "url": "https://www.ensembl.org/id/ENSSSCG00000013327" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013327", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013327", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07379", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07379", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100515427", "url": "https://www.ncbi.nlm.nih.gov/gene/100515427", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004843", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004843", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024201", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024201", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051693", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051693", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100515427", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515427", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HTPPYGI", "url": "https://omabrowser.org/oma/group/HTPPYGI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SGP0", "url": "https://www.orthodb.org/?gene=F1SGP0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12905", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12905", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12905:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12905:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00149", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00149", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003122944", 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research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SGP0", "url": "https://www.uniprot.org/uniprotkb/F1SGP0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515427", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515427", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2QPQ5-1", "protein_name": 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"MAHGIPSQGKVTITVDEYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTHSRTDGIQMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMTDGYTTYINASTCTVSFQPTNPPIIFDLPNPQGS", "length": 294 }, "evidence": [ { "id": "F1SGP0", "url": "https://omabrowser.org/oma/group/F1SGP0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BXB8-1", "protein_name": "Metallophosphoesterase MPPED2", "gene_name": "MPPED2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAHGIPSQGKVTITVDEYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTHSRTDGIQMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGIDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGIMTDGYTTYINASTCTVSFQPTNPPIIFDLPTPQGS", "length": 294 }, "evidence": [ { "id": "F1SGP0", "url": "https://omabrowser.org/oma/group/F1SGP0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9CZJ0-1", "protein_name": "Metallophosphoesterase MPPED2", "gene_name": "Mpped2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAHGIPSQGKVTITVDEYSSNPTQAFTHYNINQSRFQPPHVHMVDPIPYDTPKPAGHTRFVCISDTHSRTDGIQMPYGDILLHTGDFTELGLPSEVKKFNDWLGNLPYEYKIVIAGNHELTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPEGIDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRIRPKLHVFGGIHEGYGIMTDGYTTYINASTCTVSFQPTNPPIIFDLPNPQGS", "length": 294 }, "evidence": [ { "id": "F1SGP0", "url": "https://omabrowser.org/oma/group/F1SGP0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { 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"https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "F1SGS2", "url": "https://www.uniprot.org/uniprotkb/F1SGS2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SGS2", "url": "https://www.uniprot.org/uniprotkb/F1SGS2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SGS2", "url": "https://www.uniprot.org/uniprotkb/F1SGS2" 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SGS8", "url": "https://www.uniprot.org/uniprotkb/F1SGS8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512455", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512455", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A830-1", "protein_name": "Ankyrin repeat and BTB/POZ domain-containing protein 2", "gene_name": "ABTB2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGIYSSTLKTLEDLTLDSGYGAGDSCRSLSLSSSKSNSQAFTSSQHRGNWWYYSGSMNSRNNSWDTVNTVLPEDPEVADIFSKCPRLPDLEEYPWTDEDVARILRKAKGDGSGRPFSHEAVRRLSQLLRRALIRVSREAQRLSVMHSKCTRFEVQSAVKLIQSWSLAESCVLATVKALSLYSMSAGDGLRKGKSARCGLTFSVGRFFRWMVDTRISVRIHEYAAISLTACMENLVEEIKGRVLASQSPDGGGGEISAEILEVVINNDAELWGVLQPYEHLICGKNANGVLSLPAYFSPYNDGSVCSDGRADAYAQLELRTLEQSLLATCVGSISELSDLVSRAMHHMQCLNTIRPGMSPIRQTRQQQPISWSPDALHTLYYFLRCPQMESMENPNLDPPRMTLNNERPFMLLPPLMEWMRVAITYAEHRRSLTVDSDDIRQTARLLLPGLDCEPRQLKPECCFSSFRRLDAKAATEKFQQDLGFRMLNCGRTDLINQAIDALGADGVNTMDDQGMTPLMYACAAGDEAMVQMLIDAGANLDIPVPSTSPRYPSVHPDSRHWTALTFAVLHGHISVVQLLLDAGAHVEGSAVNSGEDNYAETPLQLASAAGNYELVSLLLSRGADPLLSMLEVNGMSSSLHEDMNCFSHSAAHGHRNVLRKLLTQPQQLKGDVLSLEEILAEGVESDTSSQGSSNEGQVKLCKTRMKALQEAMYYSAEHGYVDITMELRGLGVPWKLHVWIESLRTTFYQSRYSVVQTLLREFVTIKEEDYNEELVNEGLQLMFDILKTSKNDSINQQLASIFTHCYGSSPIPSIPEIHKTLPARLDPHFLNNKEMSDVTFLVEGKLFYAHKVLLVTASNRFKTLMTNKTEHDSHGSKTVEISDMKYNIFKMLMQYLYYGGTESMEIPTTDILELLSAASLFQLDGLQRHCEILCAQTISMENSVSIYKYAKIHNAPELAAFCEGFFLKHMSSLLEQDSFRQLIYSRNSKVQGLDPLRDLQTALAGRLHSVYVTSRV", "length": 1017 }, "evidence": [ { "id": "F1SGS8", "url": "https://omabrowser.org/oma/group/F1SGS8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BMN7-1", "protein_name": "Ankyrin repeat and BTB/POZ domain-containing protein 2", "gene_name": "ABTB2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MIGGPPGLFACRQQPSTQLCRRLAPRRSLQRAFSQVGPGLAQRREPPPSIAAALFSRGPFSAENRRSASGKLRWTRRVAEEEQRRIVPVTARSRDAGSVGLWPPRISPTFLRPPGRRAGDAAAEPRGAERKEGAPESLELVSAHLGKGAWSCERPSLGEAAPGRLPMAGTYSSTLKTLEDLTLDSGYGAGDSCRSLSLSSSKSNSQALNSSAQQHRGAAWWCYSGSMNSRHNSWDTVNTVLPEDPEVADLFSRCPRLPELEEFPWTEGDVARVLRKGAGGRRQPLFSAEAVRRLAGLLRRALIRVAREAQRLSVLHAKCTRFEVQSAVRLVHSWALAESCALAAVKALSLYSMSAGDGLRRGKSARCGLTFSVGRFFRWMVDTRISVRIHEYAAISLTACMENLVEEIRARVLASQSPDGGGAGGGEVSAEALEMVINNDAELWGVLQPYEHLICGKNANGVLSLPAYFSPYNGGSLGHDERADAYAQLELRTLEQSLLATCVGSISELSDLVSRAMHHMQGRHPLCPGSSPARQARQPPQPITWSPDALHTLYYFLRCPQMESMENPNLDPPRMALNNERPFMLLPPLMEWMRVAITYAEHRRSLTVDSGDIRQAARLLLPGLDCEPRQLKPECCFSSFRRLDARAATEKFNQDLGFRMLNCGRTDLISQAIEALGPDGVNTMDDQGMTPLMYACAAGDEAMVQMLIDAGANLDIQVPSNSPRHPSIHPDSRHWTSLTFAVLHGHISVVQLLLDAGAHVEGSAVNGGEDSYAETPLQLASAAGNYELVSLLLSRGADPLLSMLEANGMASSLHEDMNCFSHSAAHGHRNVLRKLLTQPQQAKADVLSLEEILAEGVEDSDASSQGSGSEGPMRLSRTRTKALQEAMYYSAEHGYVDITMELRALGVPWKLHVWIESLRTSFSQSRYSVVQSLLRDFSSIKEEEYNEELVTEGLPLMFDILKTSKNDSVTQQLAAIFMHCYGSSPIPRIPELRKTLPARLDPHFLNNKEMSDVTFLVEGKLFYAHKVLLVTASNRFKTLMTNKSEQDGDGSKTIEIGDMKYHIFQMMMQYLYYGGTESMDIPTSDILELLSAASLFQLDALQRHCEILGSQTLSVDSAVNTYKYAKIHNAPELALFCEGFFLKHMKALLEQDSFRQLIYGRSSKVQGLDPLQDLQSTLAERVHSLYVTSRV", "length": 1191 }, "evidence": [ { "id": "F1SGS8", "url": "https://omabrowser.org/oma/group/F1SGS8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "M9PFY3-1", "protein_name": "BTB domain-containing protein", "gene_name": "CG33291", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MYCTKDCTCSLCRELRGYKPSDKKSAPSAPTLLSRMLNDNFILRRRGISLKNFQPQSLRNSEMLAQQMPVPRPPQTPSPTPIEELPDWATEDSSRAKKPNHKVVIYFGDSIHRGGQQSPLPSPKELHSQLLQEMSQKLKTSVAEEGLTGVEKVKKVQQMAGQPETSPPANDELPPYIESVQNGVINIRIEGNYRRASALVETVAKPTLAVVAPTKSECDCDAALGDNDDGNADDDSDDPGQDEAETDSCDWSYVQEWRRAAKRPTGNLPPNFVQHQAPSQVTGLPPVPPPQMQSPHQVQSQLPPSQTPLSSQKGLAVAMATPAPRVFKELAQQPNKGMPHKMVASSSSCSGGQANSSCKMPSPGTASKALIPQRAVAGPARLTVQSTPVKSQPPQLSGSLSQSQVSPNRPILGIPTTAANPTPPRIHQHDQFRALQRVQECHSSSDENRSSGHASMSDTGGHSSSPAGGMTLGPLPEDRLAAGVTNRSTRSRRHRGIMPGGKAPWSGTGLEDIKLAMLTLRSQTSSSTYSSLSAGSESSEPARRLGRYSSLETVVTSTSADEFVWVDSHNRLVELQHPPWSQQCILKVLRNGRCQQQAEHLAVEAVSRLGYLLQRALVRIAREIQRFSAGVGLCSKQEVVGALRVVLSSSLADSCTKACLRSAAMFAVPGESALKQSKSARAGLQLSVGRFYRWMTDARLGKFIHEYAAVYLCAGIENLLEEIALQCNGTTAAALDQSIASSGDVWGLLQPFAHLNAGRIASGALALPRWANSLDQVIASSGDFRGHLATCVGSIRELKEKALRTQQEFQLAAALSGSALAALFYFMRCSQLEHTELLAASGCHAGQAQSAAPGGGTSSAGHHVQELCYERAYVVLPPLAEWLRVAAAHAEHRNAMMIDKDDVMQAARLLLPGVDCPIRPVAHDEELPTKKTHFNTAPTVSSTGTGTGSSSCSSPVVSGIGIGIGEDTSELGRRATIGVAFKLLLTGRAELLAQAAQLLPPTTRYDTQNSAGLTALMIASIRNDEVALHALLDAGCDPNVEVPPAGSAGYPAIQPDTQHWTALSFAASRANYVALRILLERGGKVEGGARSSEEKCTLTPLQLAAGTGNLEIVALLLAHGANAFLSTQQKDSLCFAGSAQKGCFCAISVAAAHGHRSCLRKLLTHPVSPGTRDVLSLEEMLAEGDVGGVRGSGGPTGAGGPNSASASGNNEDILPLLNKTQIKRLQEAMYHSAENNHLDITIELRKLGVPWTLHCWMHALSAAHDLRLDAVIDQLLQDFLQVCPDDYSAQFVSECLPLLFNIFRNKNEGTTLLLADIFATCFGWETLPPVKEQPPMQPVQGSRIDPKFVNNPELSDVTFRVEGKIFYGHKIVLVTASPRFQSMLSSKLSEGSSTPTVQINDIRYHIFQLVMQFLYCGGCSSLDVAHGDVLELMAAASFFQLEGLLRYTEARCSEMVDVDNVVAMYIHAKVYNANRLLEFCQCFLLQNMVALLTYDDSVKRLLFAKKIPNHDVLAGLLQTLQNRLKARKPNSGGGLVNSYRSPPVTPVKK", "length": 1549 }, "evidence": [ { "id": "F1SGS8", "url": "https://omabrowser.org/oma/group/F1SGS8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08764-1", "protein_name": "Ankyrin repeat and BTB/POZ domain-containing protein 2", "gene_name": "Abtb2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGTYSSTLKTLEDLTLDSGYGAGDSCRSLSLSSSKSNSQALNSSAPQHRGAAWWCYSGSMNSRHNSWDTVNTVLPEDPEVADLFSRCPRLPELEEFPWTEGDVARVLRKSVGGRRLPSFSAEAVRRLAGLLRRALIRVAREAQRLSVLHAKCTRFEVQSAVRLVHSWALAESCALAAVKALSLYSMSAGDGLRRGKSARCGLTFSVGRFFRWMVDTRISVRIHEYAAISLTACMENLVEEIRARVLASQSPDGGGAGGGEVSAEALEMVINNDAELWGVLQPYEHLICGKNANGVLSLPAYFSPYNGGSLGHDERADAYAQLELRTLEQSLLATCVGSISELSDLVSRAMHHMQGRHPLCPGTSPARQARQPPQPITWSPDALHTLYYFLRCPQMESMENPNLDPPRMTLNNERPFMLLPPLMEWMRVAITYAEHRRSLTVDSGDIRQAARLLLPGLDCEPRQLKPECCFSSFRRLDARAATERFNQDLGFRMLNCGRTDLISQPSSPGPDGVNTMDDQGLTPLMYACATGDEAMVQMLIDAGANLDIQVPSNSPRHPSVHPDSRHWTSLTFAVLHGHISVVQLLLDAGAHVEGSAVNSGEDSYAETPLQLASAAGNYELVSLLLSRGADPLLSMLEANGMASSLHEDMNCFSHSAAHGHRNVLRKLLTQPQQAKADVLSLEEILAEGVEESDTSSQGSSEGPVRLSRTRTKALQEAMYYSAEHGYVDITMELRALGVPWKLHIWIESLRTSFSQSRYSVVQGLLRDFSSIKEEEYNEELVTEGLQLMFDILKTSKNDSVLQQLATIFTHCYGTSPIPSIPEIRKTLPARLDPHFLNNKEMSDVTFLVEGKLFYAHKVLLVTASNRFKTLMTNKSEQDGDNSKTIEISDIKYHIFQMLMQYLYYGGTESMEIPTADILQLLSAANLFQLDALQRHCEILCSQTLSVESAVNTYKYAKIHNAPELALFCEGFFLKHMKALLEQMPSGSSSMAEAAKSRAWTHCRICRAP", "length": 1009 }, "evidence": [ { "id": "F1SGS8", "url": "https://omabrowser.org/oma/group/F1SGS8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TQI7-1", "protein_name": "Ankyrin repeat and BTB/POZ domain-containing protein 2", "gene_name": "Abtb2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGTYSSTLKTLEDLTLDSGYGAGDSCRSLSLSSSKSNSQALNSSAQQHRGAAWWCYSGSMNSRHNSWDTVNTVLPEDPEVADLFSRCPRLPELEEFPWTEGDVARVLRKSVGGRRLPSFSAEAVRRLAGLLRRALIRVAREAQRLSVLHAKCTRFEVQSAVRLVHSWALAESCALAAVKALSLYSMSAGDGLRRGKSARCGLTFSVGRFFRWMVDTRISVRIHEYAAISLTACMENLVEEIRARVLASQSPDGGGAGGGEVSAEALEMVINNDAELWGVLQPYEHLICGKNANGVLSLPAYFSPYNGGSLGHDERADAYAQLELRTLEQSLLATCVGSISELSDLVSRAMHHMQGRHPLCPGTSPARQARQPPQPITWSPDALHTLYYFLRCPQMESMENPNLDPPRMTLNNERPFMLLPPLMEWMRVAITYAEHRRSPTVDSGDIRQAARLLLPGLDCEPRQLKPECCFSSFRRLDARAATERFNQDLGFRMLNCGRTDLISQAIEALGPDGVNTMDDQGMTPLMYACAAGDEAMVQMLIDAGANLDIQVPSHSPRHPSVHPDSRHWTSLTFAVLHGHISVVQLLLDAGAHVEGSAVNSGEDSYAETPLQLASAAGNYELVSLLLSRGADPLLSMLEANGMASSLHEEMNCFSHSAAHGHRNVLRKLLTQPQQAKADVLSLEEILAEGVEESDTSSQGSSEGPVRLSRTRTKALQEAMYYSAEHGYLDITMELRALGVPWKLHIWIESLRTSFSQSRYSVVQSLLKDFSSIKEEEYNEELVTEGLQLMFDILKTSKNDSVLQQLATIFTHCYGTSPIPSIPEIRKTLPARLDPHFLNNKEMSDVTFLVEGKLFYAHKVLLVTASNRFKTLMTNKSEQDGDSSKTIEISDIKYHIFQMLMQYLYYGGTESMEIPTADILQLLSAANLFQLDALQRHCEILCSQTLSVESAVNTYKYAKIHNAPELALFCEGFFLKHMKALLEQDAFRQLIYGRSSKVQGLDPLQDLQSTLAERVHSVYVTSRV", "length": 1024 }, "evidence": [ { "id": "F1SGS8", "url": "https://omabrowser.org/oma/group/F1SGS8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N961-1", "protein_name": "Ankyrin repeat and BTB/POZ domain-containing protein 2", "gene_name": "ABTB2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGTYSSTLKTLEDLTLDSGYGAGDSCRSLSLSSSKSNSQALNSSAQQHRGAAWWCYSGSMNSRHNSWDTVNTVLPEDPEVADLFSRCPRLPELEEFPWTEGDVARVLRKGAGGRRLPQFSAEAVRRLAGLLRRALIRVAREAQRLSVLHAKCTRFEVQSAVRLVHSWALAESCALAAVKALSLYSMSAGDGLRRGKSARCGLTFSVGRFFRWMVDTRISVRIHEYAAISLTACMENLVEEIRARVMASHSPDGGGAGGGEVSAEALEMVINNDAELWGVLQPYEHLICGKNANGVLSLPAYFSPYNGGSLGHDERADAYAQLELRTLEQSLLATCVGSISELSDLVSRAMHHMQGRHPLCPGASPARQARQPPQPITWSPDALHTLYYFLRCPQMESMENPNLDPPRMTLNNERPFMLLPPLMEWMRVAITYAEHRRSLTVDSGDIRQAARLLLPGLDCEPRQLKPEHCFSSFRRLDARAATEKFNQDLGFRMLNCGRTDLINQAIEALGPDGVNTMDDQGMTPLMYACAAGDEAMVQMLIDAGANLDIQVPSNSPRHPSIHPDSRHWTSLTFAVLHGHISVVQLLLDAGAHVEGSAVNGGEDSYAETPLQLASAAGNYELVSLLLSRGADPLLSMLEAHGMGSSLHEDMNCFSHSAAHGHRNVLRKLLTQPQQAKADVLSLEEILAEGVEESDASSQGSGSEGPVRLSRTRTKALQEAMYYSAEHGYVDITMELRALGVPWKLHIWIESLRTSFSQSRYSVVQSLLRDFSSIREEEYNEELVTEGLQLMFDILKTSKNDSVIQQLATIFTHCYGSSPIPSIPEIRKTLPARLDPHFLNNKEMSDVTFLVEGKLFYAHKVLLVTASNRFKTLMTNKSEQDGDSSKTIEISDMKYHIFQMMMQYLYYGGTESMEIPTTDILELLSAASLFQLDALQRHCEILCSQTLSMESAVNTYKYAKIHNAPELALFCEGFFLKHMKALLEQDAFRQLIYGRSSKVQGLDPLQDLQNTLAERVHSVYITSRV", "length": 1025 }, "evidence": [ { "id": "F1SGS8", "url": "https://omabrowser.org/oma/group/F1SGS8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SGS8", "url": "https://www.uniprot.org/uniprotkb/F1SGS8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "F1SGS8", "url": "https://www.uniprot.org/uniprotkb/F1SGS8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" }, { "start_pos": 800, "end_pos": 802, "annotation": "n_glycosylation_sequon" }, { "start_pos": 876, "end_pos": 878, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SGS8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGS8" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 845, "end_pos": 914, "start_aa": "Ser", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 43, "end_pos": 45 }, { "start_pos": 800, "end_pos": 802 }, { "start_pos": 876, "end_pos": 878 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SGU6-1", "uniprot_ac": "F1SGU6", "uniprot_id": "F1SGU6_PIG", "mass": { "chemical_mass": 33249.0, "monoisotopic_mass": 33249.0 }, "refseq": {}, "gene_names": [ { "name": "H1-7", "type": "recommended", "evidence": [ { "id": "F1SGU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGU6" } ] } ], "protein_names": [ { "name": "H1.7 linker histone", "type": "synonym", "evidence": [ { "id": "F1SGU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGU6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SGU6", "url": "https://www.uniprot.org/uniprotkb/F1SGU6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "H1-7", "url": "https://www.uniprot.org/uniprotkb/F1SGU6", "locus": { "chromosome": "5", "start_pos": 78700109, "end_pos": 78698577, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000820", "url": "https://www.ensembl.org/id/ENSSSCG00000000820" } ] } } ], "crossref": [ { "id": "F1SGU6", "url": "https://alphafold.ebi.ac.uk/entry/F1SGU6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000820", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000820", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "F1SGU6", "url": "https://www.uniprot.org/uniprotkb/F1SGU6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SGU6-1", "url": "https://www.uniprot.org/uniprotkb/F1SGU6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "DEQDLSGQRGWPRRSGSWAMAEEAEPMHKSQGAEVKTQQTTEKCLGGQLRRSRRSVLKVSQLLLRAITAHKGLTLATLKKELGNAGYEVRRKCGRHSGEASKSDVKGTLLRVSGSDVAGYFRVWKIPKPKRKPGRPRLEEGLRAPRRTPLGTRNPRRRCCGRRRAAKKAREVWRRGWRADSRMRRVRPRVKDSVNYRAREDCKAKAVDEGRRRTKKEDIRPRTREEKRPSSKPREEKKQDPEKPVKRTIQKSSSVKTDRTSNVQGKSHDSRPARTKNSIKSEGPRNAAGNP", "length": 291, "header": "tr|F1SGU6-1|F1SGU6_PIG Isoform 1 of H1.7 linker histone OS=Sus scrofa OX=9823 GN=H1-7 PE=4 SV=4 CANONICAL=F1SGU6-1" }, "isoforms": [ { "isoform_ac": "F1SGU6-1", "url": "https://www.uniprot.org/uniprotkb/F1SGU6/entry#F1SGU6-1", "sequence": { "sequence": "DEQDLSGQRGWPRRSGSWAMAEEAEPMHKSQGAEVKTQQTTEKCLGGQLRRSRRSVLKVSQLLLRAITAHKGLTLATLKKELGNAGYEVRRKCGRHSGEASKSDVKGTLLRVSGSDVAGYFRVWKIPKPKRKPGRPRLEEGLRAPRRTPLGTRNPRRRCCGRRRAAKKAREVWRRGWRADSRMRRVRPRVKDSVNYRAREDCKAKAVDEGRRRTKKEDIRPRTREEKRPSSKPREEKKQDPEKPVKRTIQKSSSVKTDRTSNVQGKSHDSRPARTKNSIKSEGPRNAAGNP", "length": 291, "header": "tr|F1SGU6-1|F1SGU6_PIG Isoform 1 of H1.7 linker histone OS=Sus scrofa OX=9823 GN=H1-7 PE=4 SV=4 CANONICAL=F1SGU6-1" }, "locus": { "chromosome": "5", "start_pos": 78700106, "end_pos": 78698577, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000893.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000893.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000873.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000873.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., 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polycystin 1 interacting protein OS=Sus scrofa OX=9823 GN=EPCIP PE=4 SV=2 CANONICAL=F1SGZ7-1" }, "locus": { "chromosome": "13", "start_pos": 196388255, "end_pos": 196387599, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104866.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104866.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080538.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080538.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SH44-1", "uniprot_ac": "F1SH44", "uniprot_id": "F1SH44_PIG", "mass": { "chemical_mass": 118838.0, "monoisotopic_mass": 118838.0 }, "refseq": { "ac": "XP_020925417", "name": "WD repeat-containing protein 49 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925417" }, "gene_names": [ { "name": "WDR49", "type": "recommended", "evidence": [ { "id": "F1SH44", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SH44" } ] }, { "name": "WDR49", "type": "synonym", "evidence": [ { "id": "XP_020925417", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925417" } ] } ], "protein_names": [ { "name": "WD repeat domain 49", "type": "synonym", "evidence": [ { "id": "F1SH44", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SH44/entry#names_and_taxonomy" } ] }, { "name": "WD repeat-containing protein 49 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020925417", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925417" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SH44", "url": "https://www.uniprot.org/uniprotkb/F1SH44" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "WDR49", "url": "https://www.uniprot.org/uniprotkb/F1SH44", "locus": { "chromosome": "13", "start_pos": 106348219, "end_pos": 106492808, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011738", "url": "https://www.ensembl.org/id/ENSSSCG00000011738" } ] } } ], "crossref": [ { "id": "F1SH44", "url": "https://alphafold.ebi.ac.uk/entry/F1SH44", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011738", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011738", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100517558", "url": "https://www.ncbi.nlm.nih.gov/gene/100517558", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019775", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019775", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020472", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020472", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051242", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051242", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517558", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517558", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GQAKHWQ", "url": "https://omabrowser.org/oma/group/GQAKHWQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SH44", "url": "https://www.orthodb.org/?gene=F1SH44", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44324", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44324", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44324:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44324:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020925417", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925417", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AH47", "url": "https://www.uniprot.org/uniprotkb/A0A287AH47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AH47-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AH47-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SH44", "url": "https://www.uniprot.org/uniprotkb/F1SH44", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SH44-1", "url": "https://www.uniprot.org/uniprotkb/F1SH44-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSCQNATLELKRGSQQGPRSLVRNAEGASAEEEVSPALLENQLSLGDFVQIQRAFESSEPGQTICMSREEFTQRMTEIVGWGTKEDYGELFDKVDVAQDGFINWDKLTSFILLTLYEKDEQSKAMVVPQWKDLEFLPVKHKDTIQKVIFLKSSSRYLTISKEGLLGIWGENLKLQETLPITSDATRLKHLWVTSMVSLENVNKIAVAFTSKEICFYDLLSKEEFPCQYRLQGLKGTPICMDYWYDPLDANESILSFGDITGKVQVIAFTTALISLFERPASACEDEEATVTIHWAELLSGYHKCCYTLEHKLHHGDWVRQVTYNASLDAFISSTTSNTNTVVLAWREKAKKHLKMTSFSIAQGIHAFDYHSRLNLIATAGINHKVCLWNPYVVSKPVGVLWGHSASVIAVQFFAARKQLFSFSRDKVLRLWDIQHQLSIQRIACSFPKSQDFRCLFHFDEAHGRLFISFNNQLALLAMKSEAGKRVKSHKKAVTCVLYNSVLKQVISSDAGSTVSFWMIDTGQKIKQFTSCHGNAEICTMALDANETRLLTGSTDGTVKVWDFNGLCHHTLNVGQEGAVDISHILVLKKIILVTGWDRAITVFRPQNFNQFFIHPEEWKGGVQHRDDILCAAFLPPQTLVTGSYDGEIVLWNNSTENAHHVLHPDYQRLLKTKSDTESQKFLSAGKRCSTLPIADQATLGACSLETDTERNNAVMRLCFLEARKNTAATGGANLVSCGGSGYVRFWDTFKKQLLAEFLAHRGVGSIIMSTGKSNRYLATGDLEGWLKIWNIEEYCLNSNENKLTQAPTLIRSFRPHEDWISSLAMCEPGSRSLVLSASADCSICVTDVCSASVRIFGQGKHWQLENCFSLPKRDNNLMENKIQEESAKEIPLLSKEESCLDPTKPSLLDKKNKYSADSVRPSEVINLGMKYKERNVYRKKMHHLYNSEAIQKSLNAFRSLNIGTLKELPEVNKPAFLLDPEKYFREDLEEECPQIPELPPLSETLKAGFGEKNLFPKEILDRERRVKQLCQETSSEVKIKRNKRPLQLKEK", "length": 1051, "header": "tr|F1SH44-1|F1SH44_PIG Isoform 1 of WD repeat domain 49 OS=Sus scrofa OX=9823 GN=WDR49 PE=4 SV=3 CANONICAL=F1SH44-1" }, "isoforms": [ { "isoform_ac": "A0A287AH47-1", "url": "https://www.uniprot.org/uniprotkb/F1SH44/entry#A0A287AH47-1", "sequence": { "sequence": "MAWREKAKKHLKMTSFSIAQGIHAFDYHSRLNLIATAGINHKVCLWNPYVVSKPVGVLWGHSASVIAVQFFAARKQLFSFSRDKVLRLWDIQHQLSIQRIACSFPKSQDFRCLFHFDEAHGRLFISFNNQLALLAMKSEAGKRVKSHKKAVTCVLYNSVLKQVISSDAGSTVSFWMIDTGQKIKQFTSCHGNAEICTMALDANETRLLTGSTDGTVKVWDFNGLCHHTLNVGQEGAVDISHILVLKKIILVTGWDRAITVFRPQNFNQFFIHPEEWKGGVQHRDDILCAAFLPPQTLVTGSYDGEIVLWNNSTENAHHVLHPDYQRLLKTKSDTESQKFLSAGKRCSTLPIADQATLGACSLETDTERNNAVMRLCFLEARKNTAATGGANLVSCGGSGYVRFWDTFKKQLLAEFLAHRGVGSIIMSTGKSNRYLATGDLEGWLKIWNIEEYCLNSNENKLTQAPTLIRSFRPHEDWISSLAMCEPGSRSLVLSASADCSICVTDVCSASVRIFGQGKHWQLENCFSLPKRDNNLMENKIQEESAKEIPLLSKEESCLDPTKPSLLDKKNKYSADSVRPSEVINLGMKYKERNVYRKKMHHLYNSEAIQKSLNAFRSLNIGTLKELPEVNKPAFLLDPEKYFREDLEEECPQIPELPPLSETLKAGFGEKNLFPKEILDRERRVKQLCQETSSEVKIKRNKRPLQLKEK", "length": 709, "header": "tr|A0A287AH47-1|A0A287AH47_PIG Computationally mapped isoform of WD repeat domain 49 OS=Sus scrofa OX=9823 GN=WDR49 PE=4 SV=3 CANONICAL=F1SH44-1" }, "locus": { "chromosome": "13", "start_pos": 106442578, "end_pos": 106349042, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056068.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056068.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043198.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043198.2" } ] } }, { "isoform_ac": "F1SH44-1", "url": "https://www.uniprot.org/uniprotkb/F1SH44/entry#F1SH44-1", "sequence": { "sequence": "MSCQNATLELKRGSQQGPRSLVRNAEGASAEEEVSPALLENQLSLGDFVQIQRAFESSEPGQTICMSREEFTQRMTEIVGWGTKEDYGELFDKVDVAQDGFINWDKLTSFILLTLYEKDEQSKAMVVPQWKDLEFLPVKHKDTIQKVIFLKSSSRYLTISKEGLLGIWGENLKLQETLPITSDATRLKHLWVTSMVSLENVNKIAVAFTSKEICFYDLLSKEEFPCQYRLQGLKGTPICMDYWYDPLDANESILSFGDITGKVQVIAFTTALISLFERPASACEDEEATVTIHWAELLSGYHKCCYTLEHKLHHGDWVRQVTYNASLDAFISSTTSNTNTVVLAWREKAKKHLKMTSFSIAQGIHAFDYHSRLNLIATAGINHKVCLWNPYVVSKPVGVLWGHSASVIAVQFFAARKQLFSFSRDKVLRLWDIQHQLSIQRIACSFPKSQDFRCLFHFDEAHGRLFISFNNQLALLAMKSEAGKRVKSHKKAVTCVLYNSVLKQVISSDAGSTVSFWMIDTGQKIKQFTSCHGNAEICTMALDANETRLLTGSTDGTVKVWDFNGLCHHTLNVGQEGAVDISHILVLKKIILVTGWDRAITVFRPQNFNQFFIHPEEWKGGVQHRDDILCAAFLPPQTLVTGSYDGEIVLWNNSTENAHHVLHPDYQRLLKTKSDTESQKFLSAGKRCSTLPIADQATLGACSLETDTERNNAVMRLCFLEARKNTAATGGANLVSCGGSGYVRFWDTFKKQLLAEFLAHRGVGSIIMSTGKSNRYLATGDLEGWLKIWNIEEYCLNSNENKLTQAPTLIRSFRPHEDWISSLAMCEPGSRSLVLSASADCSICVTDVCSASVRIFGQGKHWQLENCFSLPKRDNNLMENKIQEESAKEIPLLSKEESCLDPTKPSLLDKKNKYSADSVRPSEVINLGMKYKERNVYRKKMHHLYNSEAIQKSLNAFRSLNIGTLKELPEVNKPAFLLDPEKYFREDLEEECPQIPELPPLSETLKAGFGEKNLFPKEILDRERRVKQLCQETSSEVKIKRNKRPLQLKEK", "length": 1051, "header": "tr|F1SH44-1|F1SH44_PIG Isoform 1 of WD repeat domain 49 OS=Sus scrofa OX=9823 GN=WDR49 PE=4 SV=3 CANONICAL=F1SH44-1" }, "locus": { "chromosome": "13", "start_pos": 106492228, "end_pos": 106349042, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012849.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012849.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012509.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012509.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SH44", "url": "https://www.uniprot.org/uniprotkb/F1SH44" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517558", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517558", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0N4SUK7-1", "protein_name": "WD repeat domain 49", "gene_name": "Wdr49", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGINTVVLAWREKSKKLLKMTSFNIAQGIHAFDYHSRLNLIATAGINNKVCLWNPYVLSKPVGVLWGHSASVIAVQFFAERKQLFSFSRDKVLRLWDIQHQLSIQRITCSFPKSQDFRCLFQFDETHGRLFISFNNQLALLAIKNEASKRVKSHLKAVSCVLYNSLLKQVISSDVGSTVSFWMIETGQKIKQFAGCHGNAEISTMALDANKTRLLTGSTDGTVKVWDFNGYCHYTLNVGQDGVVDISQILVLKKTILVVGWERALIVFRPQNFNQFFIQSEEWKGGVHHQDDILCAAFSPPQTLVTGSYDGEIVLWNNNTENAHHALHPGYQRQLTSMVDVEAQKLNSRRSCESHGVADQATQAARNVKIDTEGNNAVMRLCFLEARKTKAATGGANLVSCGASGYVRFWDTFKKVLLAEFLAHAGVGSIIMSTDKLNQYLATGDSDGWLKIWNIEEYCTNSTESKITQPPPLLRSSQPHEDRISSLEMCESCGRLLIISSSADCSVCVTGLSSAPALIFGQASHWNIENHFSLPERDTNLIESKNQEERMKVNPLFSKEELCLDSTEHSLLTEEDEDNSTHLSTEEMNFSLKYKRRNSLKKKAYKPCYGEIIQTSTSTFGSLCLRTLKELPEVKKPAFLLDPDKYFKEGPEEDVSQIPELPLLSETLKAVFDEKSLFPKELLYRERQDKSLCQETNGEMKIKQNKKQL", "length": 710 }, "evidence": [ { "id": "F1SH44", "url": "https://omabrowser.org/oma/group/F1SH44/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3Q1M7G7-1", "protein_name": "WD repeat domain 49", "gene_name": "WDR49", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSCQNATPGLNKGSQPRPENLEKTSHGATAKEDASTVLLENQLTPGDFVQIQRAFEPSEPSQTICMSREEFVQRMTEIVGWGTEEEYGELFDKVDVAQEGFINWDKLTSFLLLTLYEKDEQAKATVVPQWRDLEFLPVKHKDTIQRVIFLKSSSRYLTISKEGSVGIWGENLKLQEMLPITSDATKLKHLWVTSMVSLENVNKIAVAFTSKEICFYDLLSKEEFPCQYKLQGLKGTPICMDYWYNPLDANESILSFGDITGKVQVIAFTTALISLFEHPAGACEDEEATVTINWVELCSGHHKCCYTLGHKLHHGDWVRQVTYNASLDAIISSTTSNTNTVVLAWREKSKKHLKMTSFNIAQGIHGFDYHSQLNLIATAGIDNKVCLWNPYVVSKPVGVLWGHSASVIAVQFFAARKQLFSFSRDKVLRLWDIQHQLSIQRISCFFPKSQDFRCLFHFDEAHGRLFISFNNQLALLAMKSEAGKRVTSHKKAVTCVLYNSVLKQVISSDVGSTISFWMIDTGQKIKQFTGCHGNAEISTMALDANETRLLTGSTDGTVKVWDLNGCCHHTLNVGQEGAVDISHILVLKKTILVTGWDRSITVFRPQNFNQFSIQPEEWKGGIQHHDDILCAAFSPPQTLVTGSYDGEIVLWNNSTENAHYVLHPDYQRLLKSKSDTGPQKLLGAGRSPSTHPTYDQATLGACSFEMDTECNHAVMRLCFLEARKNITETGGANLVSCGGSGYVRFWDTFKKQLLAEFLAHSGVGSIIMSTDKSNRYLATGDLEGWLKIWNIEEYCLNSSKNKLTQAPALIRSVRPHEDWISSLEMCEAGGRSLVLSASADCSICATDVCGVPVQIFGQEKHWQLENCSSVPKRDTNLMGNKIQEKSIKEIRLFSKEESCLDPSKHSLLDKKTYSVRPSEVINLGVKYMETHDLYDGGIIRKSCSSFRSLSIGTLKELPEVNKPAFLLDPEKYFREGPEEQCPQIPEFPSLSETLKAIFDEKNLFPKEILDHERRAKQLCQETSSEVKIKRNKKP", "length": 1034 }, "evidence": [ { "id": "F1SH44", "url": "https://omabrowser.org/oma/group/F1SH44/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1M344-1", "protein_name": "WD repeat domain 49", "gene_name": "Wdr49", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKRGEVIRSYPDVALGLNMASQSESAHLENTEVKTASEHYGTDLVENKLSVEDFVKIQQVFESQDPSQTICMPREVFVQKMTETVGWGTKEEYGELFDKVDVSQDGFIDWDKLTSFILLSLSERDERAKATVIPQWKDLEFLPGKHKDTIQKIVFLKSSSRYLTISKEGLLGIWGENLKLQETLPITSDAIKLKHLWVTGLVSLENVNKIAVAFTSKEICFYDLLSKEEFPCQYKLQGLQGAPICMDYWYDPFDPKDSILSFGDITGKVQAIAFTAAVISLFERPANACDDEEATMTIDWAELVSGCHKCCHVLQHTTHHGDWVRQVTYNASLDAFISSTMSSTNTVVLAWREKSKKLLKMTSFNIAQGIHAFDYHSRLNLIATAGINNKVCLWNPYVLSKPVGVLWGHSASVIAVQFFAERKQLFSFSRDKVLRLWDIQHQLSIQRIACSFPKSQDFRCLFHFDETHGRLFISFNNQLALLAIKNEASKRVKSHLKAVSCVLYNSHLKQVISSDVGSTVSFWMIETGQKIKQFAGCHGNAEISTMTLDANKTRLLTGSTDGTVKVWDFNGYCHHTLNVGQDGVVEISQILVLKKTILVVGWERAVTVFRPHNFNQFFIQSEEWKGGVRHQDDILCAAFLPPQTLATGSYDGEIVLWNNNTENAHHVLHPGYQRQLASMLDLEAQKLNAGRSRATHCVADQTNQAALNVKIDTEGNNAVMRLCFLEARKTNAATGGANLVSCGASGYVRFWDIFKKVLLAEFLAHAGVGSIVMSTDKLNQYLATGDPDGCLKIWNIEEYCTNSTDSKVTQTPTLLRSLQPHEDRISSLEMCESGGHLLIISSSADCSVCVTGLSNAPALIFGQASRWNIENYFSLPKRDTNLVESKIPEENMEINPLFSEEESSLDSTEESLLTEENRDNSTHTTRSSEEMNFSLKCKRRNIFKNKTHKPYYGEILQKSTSTFGSLSLRNLEELPEVKKPAFLQDPDRYFKEEPEEDESQIPELPLLSETLKAVFDEKSLFPKELLYRERQDKPLCQERNGETKIKRNKKRL", "length": 1053 }, "evidence": [ { "id": "F1SH44", "url": "https://omabrowser.org/oma/group/F1SH44/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8IV35-1", "protein_name": "Cilia- and flagella-associated protein 337", "gene_name": "CFAP337", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSCQKAVLELNIGSQLGPKSPERTEGVTAFEDYGTGLLENQLSVGDFVKIQKAFESPQPRKIICMSREDFTQKMTEIVGWGTKEEYGELFDKVDVAQDGFINWDKLTSFILLELYEQDERAKATVVPQWKDLEFLPVKHKDTIQKVIFLKNSSHYLTISKEGLLAIWGEHLKLQETFPITSDATKLKHLWVTSLVSLENVNKIAVAFTSKEVCFYDLLSKEEFACQYKLQGLKGTPICMDYWYDPLDANESILSFGDITGKVQAIAFTAALISLFERPASACEDGEATMTINWAELLSGCHKCCHILEHKLHQGDWVRQVTYNASLDAIISSTTSNTNSVVMAWREKSKKRLNMTSFNIAQGIHAFDYHSRLNLIATAGINNKVCLWNPYVVSKPVGVLWGHSASVIAVQFFVERKQLFSFSKDKVLRLWDIQHQLSIQRIACSFPKSQDFRCLFHFDEAHGRLFISFNNQLALLAMKSEASKRVKSHEKAVTCVLYNSILKQVISSDTGSTVSFWMIDTGQKIKQFTGCHGNAEISTMALDANETRLLTGSTDGTVKIWDFNGYCHHTLNVGQDGAVDISQILILKKKILVTGWERYDYASWKTIGRAITVFRPQNFNQFFIQPEEWKGGIQHHDDILCAAFLPPQTLVTGSYDGEIVLWNNSTENAHHVLHPDYQRLLKSKLDTKPQKLLSAGRSQPSHPMADHSTTGVRNFEIDTEGKNAVMRLCFLKARKNTAVTGGANLVSCGGSGYVRFWDIYKKQLLAEFLAHSGVGSIIMSTDKMNRYLTTGDLDGWLKIWNIEEYCLNSSKNKITKAPTLIRSFQPHEDRISSLEMCEPGGQLLIISSSADCSICVTGVCNAPVWIFGQAKHWHIENCLFLPKRDTNLVESEIQKEISLFSKEESCLDPTEHSLLNKKNKDDSTYNVRPSEDINLDIKYKERSTCMKETQKPYYGEVIKKSFSTFRSLNIGALEELPEVNKPAFLLDPEKYFRKEPEEERPQILEAPSLFKTLKAVFDEKNLFPKEILHHERKAKQLCQEKSCEVKKNKK", "length": 1049 }, "evidence": [ { "id": "F1SH44", "url": "https://omabrowser.org/oma/group/F1SH44/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1SH44", "url": "https://www.uniprot.org/uniprotkb/F1SH44" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 250, "end_pos": 252, "annotation": "n_glycosylation_sequon" }, { "start_pos": 324, "end_pos": 326, "annotation": "n_glycosylation_sequon" }, { "start_pos": 545, "end_pos": 547, "annotation": "n_glycosylation_sequon" }, { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" }, { "start_pos": 652, "end_pos": 654, "annotation": "n_glycosylation_sequon" }, { "start_pos": 653, "end_pos": 655, "annotation": 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[], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SH45", "url": "https://www.uniprot.org/uniprotkb/F1SH45" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516831", "name": "", "url": 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"organism": "Rattus norvegicus", "sequence": { "sequence": "MKKTILWSFLLFLSGSQTSRTMDQKNAEFAVDLYKAISLSNKNNVIFSPLGTTVLLGMVQLGAKGKAQQQIMQTLRMQKTSTGEEFSVLKSLFSAISKKKQEFTFNLASALYLQEGFIVKESYLHSNKEFFQSATKLVDFLDAKTSAQAISTWVESKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTDFSKKDGSTVKIPMMKALLRAKYGYFSESSMTYQVLELPYKADEFSLVILLPTEDVNIEEVEKQVTARHVQKWFSELHEEEVEVSLPRFKIEQKLDFKEALFSLNVTEIFSGGCDLSGITDSSELYVSRAMQKVFFEINEDGSEAAASTGINIPAIMSLTQTQFLANHPFLFIMKHIQTESILFMGKVTDPDIHTVKGRDLDSL", "length": 405 }, "evidence": [ { "id": "F1SH45", "url": "https://omabrowser.org/oma/group/F1SH45/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O75830-1", "protein_name": "Serpin I2", "gene_name": "SERPINI2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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[ { "id": "XP_001925492", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925492" } ] } ], "protein_names": [ { "name": "Glycosyltransferase 8 domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "F1SH98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SH98/entry#names_and_taxonomy" } ] }, { "name": "glycosyltransferase 8 domain-containing protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001925492", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925492" } ] } ], "function": [ { "annotation": "In vitro, catalyzes the transfer of a galactose residue from UDP-galactose onto GalNAc and GlcNAc structures.", "evidence": [ { "database": "UniProtKB", "id": "I3LJL0", "url": "https://www.uniprot.org/uniprotkb/I3LJL0#function" }, { "database": "UniProtKB", "id": "ARBA00094223", "url": "https://www.uniprot.org/uniprotkb/ARBA00094223#function" }, { "database": "UniProtKB", "id": "F1SH98", "url": "https://www.uniprot.org/uniprotkb/F1SH98#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SH98", "url": "https://www.uniprot.org/uniprotkb/F1SH98" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GLT8D1", "url": "https://www.uniprot.org/uniprotkb/F1SH98", "locus": { "chromosome": "13", "start_pos": 34828604, "end_pos": 34839794, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011448", "url": "https://www.ensembl.org/id/ENSSSCG00000011448" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011448", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011448", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06429", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06429", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100158029", "url": "https://www.ncbi.nlm.nih.gov/gene/100158029", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002495", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002495", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029044", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029044", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050748", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050748", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100158029", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158029", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YKQHSNI", "url": "https://omabrowser.org/oma/group/YKQHSNI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13778", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13778", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13778:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13778:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01501", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01501", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001925492", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925492", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SH98", "url": "https://www.uniprot.org/uniprotkb/F1SH98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SH98-1", "url": "https://www.uniprot.org/uniprotkb/F1SH98-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJL0", "url": "https://www.uniprot.org/uniprotkb/I3LJL0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LJL0-1", "url": "https://www.uniprot.org/uniprotkb/I3LJL0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSFRKVNIIILVVAVALFLLVLHHNFLSLNSLLRNEVSDSGIVGLQPIDFIPNAPQHAVDGRQEEIPVVIAASEDRLGGAIAAINSIQHNTRSNVIFYIVTLNGTADHLRSWLSSSTLKSIRYKIVNFDSKLLEGKVKEDPDQGESIKPLTFARFYLPILVPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVVIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNITNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYTDIWEKWYIPDPTGKFSLIRRHVEISNIK", "length": 371, "header": "tr|F1SH98-1|F1SH98_PIG Isoform 1 of Glycosyltransferase 8 domain-containing protein 1 OS=Sus scrofa OX=9823 GN=GLT8D1 PE=3 SV=3 CANONICAL=F1SH98-1" }, "isoforms": [ { "isoform_ac": "F1SH98-1", "url": "https://www.uniprot.org/uniprotkb/F1SH98/entry#F1SH98-1", "sequence": { "sequence": "MSFRKVNIIILVVAVALFLLVLHHNFLSLNSLLRNEVSDSGIVGLQPIDFIPNAPQHAVDGRQEEIPVVIAASEDRLGGAIAAINSIQHNTRSNVIFYIVTLNGTADHLRSWLSSSTLKSIRYKIVNFDSKLLEGKVKEDPDQGESIKPLTFARFYLPILVPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVVIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNITNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYTDIWEKWYIPDPTGKFSLIRRHVEISNIK", "length": 371, "header": "tr|F1SH98-1|F1SH98_PIG Isoform 1 of Glycosyltransferase 8 domain-containing protein 1 OS=Sus scrofa OX=9823 GN=GLT8D1 PE=3 SV=3 CANONICAL=F1SH98-1" }, "locus": { "chromosome": "13", "start_pos": 34834771, "end_pos": 34828915, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054567.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054567.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040727.3", "url": "https://www.ensembl.org/id/ENSSSCP00000040727.3" } ] } }, { "isoform_ac": "I3LJL0-1", "url": "https://www.uniprot.org/uniprotkb/F1SH98/entry#I3LJL0-1", "sequence": { "sequence": "SAIGLDLECTGRGRPGGGPGPGTYDADAELAGRAGWRAVAPPPPPPPPRATVNIIILVVAVALFLLVLHHNFLSLNSLLRNEVSDSGIVGLQPIDFIPNAPQHAVDGRQEEIPVVIAASEDRLGGAIAAINSIQHNTRSNVIFYIVTLNGTADHLRSWLSSSTLKSIRYKIVNFDSKLLEGKVKEDPDQGESIKPLTFARFYLPILVPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVVIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNITNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYTDIWEKWYIPDPTGKFSLIRRHVEISNIK", "length": 417, "header": "tr|I3LJL0-1|I3LJL0_PIG Computationally mapped isoform of Glycosyltransferase 8 domain-containing protein 1 OS=Sus scrofa OX=9823 GN=GLT8D1 PE=3 SV=3 CANONICAL=F1SH98-1" }, "locus": { "chromosome": "13", "start_pos": 34839479, "end_pos": 34828915, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029054.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029054.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024271.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024271.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SH98", "url": "https://www.uniprot.org/uniprotkb/F1SH98" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100158029", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158029", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AET2-1", "protein_name": "Glycosyltransferase 8 domain-containing protein 1", "gene_name": "GLT8D1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTLRKVNISILVAAVVIFLLVLHHNFLGLSDLLKRELTDSNPLGLQPIDFIPAAPQRLTDERNDREISVVIAASDERLGGAIAAMNSIYRNTRSNVVFYIVTLNDTVDHLRLWLRNTALKNLRYHILNFDPRVLEGKVQVDPQKADSIKPLTFARFYLPNLVPHAEKAIYVDDDIIVQDDILELYNTPLKPGHAAAFSDDCDSTTNKVAVRGAGNQYNYIGFLDYKKETIRKLAMKANTCSFNPGVFVANLTEWKLQNITKQLEKWMTLNVAEELYSRTLSGSITTPPLLIVFYKQHSSIDPLWNVRHLGSNAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYAEVWEKWYVPDPTGKFSLIRRHPEAYEAK", "length": 372 }, "evidence": [ { "id": "F1SH98", "url": "https://omabrowser.org/oma/group/F1SH98/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7F1L5-1", "protein_name": "Glycosyltransferase 8 domain-containing protein 1", "gene_name": "Glt8d1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSFRKVSIIIWVLAIVLFLLVLHHNFLSLSSLLRNEVSDSGILGLQPIDFVADIHQHPVNGRQEEIPVVIAASEDRLGGTIAAINSIHHNTRSNVIFYIVTLNSTEDHLRSWLNSVSLKSIRYKIVNFDTKLLEGKVKEDPDQGESMKPLTFARFYLPILVPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSTSTKVIIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHFKPWGRAASYADVWEKWYIPDPTGKFSLIRRHMDTSNIK", "length": 371 }, "evidence": [ { "id": "F1SH98", "url": "https://omabrowser.org/oma/group/F1SH98/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0V7R1-1", "protein_name": "Probable galacturonosyltransferase-like 3", "gene_name": "GATL3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSLRLRLCLLLLLPITISCVTVTLTDLPAFREAPAFRNGRECSKTTWIPSDHEHNPSIIHIAMTLDAIYLRGSVAGVFSVLQHASCPENIVFHFIATHRRSADLRRIISSTFPYLTYHIYHFDPNLVRSKISSSIRRALDQPLNYARIYLADLLPIAVRRVIYFDSDLVVVDDVAKLWRIDLRRHVVGAPEYCHANFTNYFTSRFWSSQGYKSALKDRKPCYFNTGVMVIDLGKWRERRVTVKLETWMRIQKRHRIYELGSLPPFLLVFAGDVEPVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRLDSRRPCPLDSLWAPYDLFRYSPLISDS", "length": 345 }, "evidence": [ { "id": "F1SH98", "url": "https://omabrowser.org/oma/group/F1SH98/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5E9E7-1", "protein_name": "Glycosyltransferase 8 domain-containing protein 1", "gene_name": "GLT8D1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSFRKVNIVILVLAVALFLLVLHHNFLGLSSLLRNEVSDSGIVGLQPVDFIPNAPQRVVDGREEEIPVVIAASEDRLGGAIAAINSIQHNTRSNVIFYIVTLNGTADHLRSWLSSSNLKRIRYKIVNFDTKLLEGKVKEDPDQGESIKPLTFARFYLPILVPRAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSTSAKVVIRGAGNQYNYIGYLDYKKERIRELSMKASTCSFNPGVFVANLTEWRRQNITNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYTDVWEKWYIPDPTGKFSLIRRHVEISNTK", "length": 371 }, "evidence": [ { "id": "F1SH98", "url": "https://omabrowser.org/oma/group/F1SH98/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q68CQ7-1", "protein_name": "Glycosyltransferase 8 domain-containing protein 1", "gene_name": "GLT8D1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSFRKVNIIILVLAVALFLLVLHHNFLSLSSLLRNEVTDSGIVGPQPIDFVPNALRHAVDGRQEEIPVVIAASEDRLGGAIAAINSIQHNTRSNVIFYIVTLNNTADHLRSWLNSDSLKSIRYKIVNFDPKLLEGKVKEDPDQGESMKPLTFARFYLPILVPSAKKAIYMDDDVIVQGDILALYNTALKPGHAAAFSEDCDSASTKVVIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNITNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHLKPWGRTASYTDVWEKWYIPDPTGKFNLIRRYTEISNIK", "length": 371 }, "evidence": [ { "id": "F1SH98", "url": "https://omabrowser.org/oma/group/F1SH98/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NSU3-1", "protein_name": "Glycosyltransferase 8 domain-containing protein 1", "gene_name": "Glt8d1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSFRKVNIIIWVLAVVLFLLVLHHNFLSLSSLLKNDISDSGIVGLQPIDFVASAHQHPVSERQEEIPVVIAASEDRLGGTIAAINSVHQNTRSNVMFYIVTFNSTADHLRSWLNSGSLKSIRYKIVNFDTKLLEGKVKQDPDQGESMKPLTFARFYLPILVPSAKKAIYMDDDVIVQGDILALYNTPLKPGHAAAFSEDCDSASTKVIIRGAGNQYNYIGYLDYKKERIRKLSMKASTCSFNPGVFVANLTEWKRQNVTNQLEKWMKLNVEEGLYSRTLAGSITTPPLLIVFYQQHSTIDPMWNVRHLGSSAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYADVWEKWYIPDPTGKFSLIRRHMDTSNIK", "length": 371 }, "evidence": [ { "id": "F1SH98", "url": "https://omabrowser.org/oma/group/F1SH98/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "UDP-glycosyltransferase activity", "id": "GO:0008194", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008194", "evidence": [ { "database": "UniProtKB", "id": "F1SH98", "url": "https://www.uniprot.org/uniprotkb/F1SH98" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", 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"https://www.uniprot.org/uniprotkb/F1SHB7", "locus": { "chromosome": "5", "start_pos": 15335950, "end_pos": 15322674, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000198", "url": "https://www.ensembl.org/id/ENSSSCG00000000198" } ] } } ], "crossref": [ { "id": "F1SHB7", "url": "https://alphafold.ebi.ac.uk/entry/F1SHB7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000198", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000198", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623474", "url": "https://www.ncbi.nlm.nih.gov/gene/100623474", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007829", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007829", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623474", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623474", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VWWHCLL", "url": "https://omabrowser.org/oma/group/VWWHCLL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SHB7", "url": "https://www.orthodb.org/?gene=F1SHB7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44733", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44733", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44733:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44733:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05154", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05154", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003355426", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355426", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SHB7", "url": "https://www.uniprot.org/uniprotkb/F1SHB7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHB7-1", "url": "https://www.uniprot.org/uniprotkb/F1SHB7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKGLLMTYALWAIGGPAGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQANRAQGQRQSSGRGTPPLSPIRFAAQMIVGIYFGLVALISLSFMASFYIVGLPLAVGLGVLLVAAVGNQTSDFKHTLGVAFLISPIFYGRPIAILPISLAASITAQKHRRYKTSTGSETLSVRLYRLGLAYLAFTGPLAYSALCNTATTLSYVAETLGSFLSWFSFFPLLGHLMESVLLLPYRVWSLLVGDYGFSSGYFQEWEKLYEFVQSFQDEKRQLAYQVLGLAEGATNEEIHHRYRELVKIWHPDHNRHQPEEAQRHFLEIQAAYEVLSQPRKPRGSWRLNTALFKEAL", "length": 351, "header": "tr|F1SHB7-1|F1SHB7_PIG Isoform 1 of DnaJ homolog subfamily C member 22 OS=Sus scrofa OX=9823 GN=DNAJC22 PE=4 SV=2 CANONICAL=F1SHB7-1" }, "isoforms": [ { "isoform_ac": "F1SHB7-1", "url": "https://www.uniprot.org/uniprotkb/F1SHB7/entry#F1SHB7-1", "sequence": { "sequence": "MAKGLLMTYALWAIGGPAGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQANRAQGQRQSSGRGTPPLSPIRFAAQMIVGIYFGLVALISLSFMASFYIVGLPLAVGLGVLLVAAVGNQTSDFKHTLGVAFLISPIFYGRPIAILPISLAASITAQKHRRYKTSTGSETLSVRLYRLGLAYLAFTGPLAYSALCNTATTLSYVAETLGSFLSWFSFFPLLGHLMESVLLLPYRVWSLLVGDYGFSSGYFQEWEKLYEFVQSFQDEKRQLAYQVLGLAEGATNEEIHHRYRELVKIWHPDHNRHQPEEAQRHFLEIQAAYEVLSQPRKPRGSWRLNTALFKEAL", "length": 351, "header": "tr|F1SHB7-1|F1SHB7_PIG Isoform 1 of DnaJ homolog subfamily C member 22 OS=Sus scrofa OX=9823 GN=DNAJC22 PE=4 SV=2 CANONICAL=F1SHB7-1" }, "locus": { "chromosome": "5", "start_pos": 15334767, "end_pos": 15323811, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000211.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000211.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000209.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000209.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHB7", "url": "https://www.uniprot.org/uniprotkb/F1SHB7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623474", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623474", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E7F2F5-1", "protein_name": "DnaJ homolog subfamily C member 22", "gene_name": "dnajc22", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAKKLMITYALWAMGGPLGLHHIYLGRDSHALLWILTFGGFGIGWAREFFRIPSYVSEANRDVEKGRVRHPGATPPPPVGLIRFVGQICVGVYFGSVALISLSSLSFFYFLVLPLSVAAGVHLVSSVGQQTSNLHKTLITCVITSSIFYGSNLSPLPISIAGSVTSAQHNTLKPLRPEPLGPRLYRLSLGVLAFSAPLGYCVFHNTTATLYYISDCIAALIDFFWFFPWLKGVLEYFLLLPYRLLCLLTGGGFYEESWRKMLEIILNEFSKKEMEALKILSLPEEASLEEITRSYRELAKVWHPDHNPKRQEEAQQMFIQIQEAYEILVDRHKTKRRK", "length": 338 }, "evidence": [ { "id": "F1SHB7", "url": "https://omabrowser.org/oma/group/F1SHB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q17QW0-1", "protein_name": "DnaJ homolog subfamily C member 22", "gene_name": "DNAJC22", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAKGLLMTYTLWAVGGPAGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWMLPSFVAQANRAQEQRQGSGRGTPPLSLIRFVAQMIVGMYFGLVALISLSFMASFYIVGLPLAVGLGVLLVAAVGNQTSDLKNTLGAAFLTSPIFYGRPIAILPISLAASITAQKHRRYKPSVGSETLSVRLYRLGLAYLAFTGPLVHSVLCHTAVTLSYVADTLGSFLSWFSFFPLLGRLLESVLLLPFRAWKLLVGDHGISSSYFQEWEKLYEFVHSFQDEKRQLALQVFGLSEGATNEEIHGRYRELVKTWHPDHNRYQMEEAQRRFLEIQAAYEVLRQPRKPRGSWRWEETSF", "length": 347 }, "evidence": [ { "id": "F1SHB7", "url": "https://omabrowser.org/oma/group/F1SHB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5PR00-1", "protein_name": "DnaJ homolog subfamily C member 22", "gene_name": "Dnajc22", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGLLMTYALWAFGGPVGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQANGVQSWKQRPEEERPPLSLLRFASQMVVGVYFGLVALISLSSTANFYIVGLPLAVGLGVLLVAAVGNQTSDFKNTLGAAFLTSPVFYGRPIAILPISLAASITAQKHRRYKVSAVSETLSVRLYRVGLAYLAFTGPLAYSTLYNTAATINYAAETLGSFLSWFNFFPLLGRLVESVLLLPCRIWWLLVGAPGFNSSQFQEWEKLYEFVDSFQDEKRQLAHQVLGIPEGATNEEIHRSYRDLVKVWHPDHNRHQTEEAQRHFLEIQAAYEVLSQPKKPRASWR", "length": 341 }, "evidence": [ { "id": "F1SHB7", "url": "https://omabrowser.org/oma/group/F1SHB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CHS2-1", "protein_name": "DnaJ homolog subfamily C member 22", "gene_name": "Dnajc22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"ENSSSCT00000073373.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073373.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068789.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068789.1" } ] } }, { "isoform_ac": "F1SHE5-1", "url": "https://www.uniprot.org/uniprotkb/F1SHE5/entry#F1SHE5-1", "sequence": { "sequence": "MEQLSDEEIDHGAEEDSDKEDQDLDKMFGAWLGELDKLTQSLDSDKPTEPIKRSPLRQETNMANFSYRFSIYNLNEALNQGETVDLDALMADLCSIEQELSSIGTGNSKRQMTETKAPQKVPPSRHTSKHGTSKGLSSSSSNRISKPSHANYSLDDITAQLEQASLSMDEAAQQSVLEDTKPLVTNQHRRTASAGTVSDAEVRSISNSSRSSITSAASSMDSLDIDKVTRPQELDLTHQGQPITEHAISLRCPSKQAKRHIDFTEEQAELTPEEQAAKLKAEKIRVALEKIKEAQVKKLVIRVHMADDSSKTMMVDERQTVRQVLDNLMDKSHCGYSLDWSLVETISELQMERIFEDHENLVENLLNWTRDSQNKLIFMERIEKYALFKNPQNYLLGKKETAEMADRNKEVLLEECFCGSSVTVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDARTLHQWVNGIRIAKYGKHLYMNYQEALKRTESAYDWTSLSSSSIKSGSSSSSIPESQSNHSNQSDSGVSDTQPAGHIRSQSIVSSIFSEAWKRGTQLEESSK", "length": 620, "header": "tr|F1SHE5-1|F1SHE5_PIG Isoform 1 of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 OS=Sus scrofa OX=9823 GN=RAPH1 PE=3 SV=4 CANONICAL=F1SHE5-1" }, "locus": { "chromosome": "15", "start_pos": 106961095, "end_pos": 106911022, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017550.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017550.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017078.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017078.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHE5", "url": "https://www.uniprot.org/uniprotkb/F1SHE5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SHE5", "url": "https://www.uniprot.org/uniprotkb/F1SHE5" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "F1SHE5", 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"IPR006723", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006723", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024114", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024114", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027267", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027267", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IHEEFTG", "url": "https://omabrowser.org/oma/group/IHEEFTG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10164", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10164", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10164:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10164:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04629", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04629", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020931219", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931219", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FNB3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNB3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNB3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHE9-1", "url": "https://www.uniprot.org/uniprotkb/F1SHE9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSFGQPRPEDNQSVVSKMQKKYWKTRQVFIRATGKKEDEHVVASDAELDAKLEVFHSIQETCTELLKIIEKYQLRLNVISEEENELGLFLKFQAERDTTQAGRMMKATGKALCSSAKQRLALYTPLSRLKQEVATFSQRAVSDTQMTINRMEQARTEYRGALLWMKDVSQELDPDTLKQMEKFRKVQIQVRNSKASFDKLKMDVCQKVDLLGASRCNMLSHSLATYQRTLLGFWEKTARMMSHIRGAYVGIHPYDFVALKQLQDTPSKLTEDHKEEQIEDSSLPENLNKLVLSDEVVSLESESAIEDHKEKHSQIREFGAAQLSNSENVAKDLPVDSLEDDFEKEFSFLNSLLSPGFSSASELPQECQAVFGSPKASLSSQEPPRGSEPLVHSSRFLPSQLFDLGLRASGAFNSWASQGGELPLSHMENQQVPSGSSKKLTKSPNSGTQDMSAWFNLFADLDPLSNPDAIGHSDDELLTA", "length": 481, "header": "tr|F1SHE9-1|F1SHE9_PIG Isoform 1 of Islet cell autoantigen 1 like OS=Sus scrofa OX=9823 GN=ICA1L PE=4 SV=3 CANONICAL=F1SHE9-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FNB3-1", "url": "https://www.uniprot.org/uniprotkb/F1SHE9/entry#A0A8W4FNB3-1", "sequence": { "sequence": "MDSFGQPRPEDNQSVVSKMQKKYWKTRQVFIRATGKKEDEHVVASDAELDAKLEIGPVYSSVSSKARSSNIQSKGSL", "length": 77, "header": "tr|A0A8W4FNB3-1|A0A8W4FNB3_PIG Computationally mapped isoform of Islet cell autoantigen 1 like OS=Sus scrofa OX=9823 GN=ICA1L PE=4 SV=1 CANONICAL=F1SHE9-1" }, "locus": { "chromosome": "15", "start_pos": 106348468, "end_pos": 106332892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092446.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092446.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080388.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080388.1" } ] } }, { "isoform_ac": "F1SHE9-1", "url": "https://www.uniprot.org/uniprotkb/F1SHE9/entry#F1SHE9-1", "sequence": { "sequence": "MDSFGQPRPEDNQSVVSKMQKKYWKTRQVFIRATGKKEDEHVVASDAELDAKLEVFHSIQETCTELLKIIEKYQLRLNVISEEENELGLFLKFQAERDTTQAGRMMKATGKALCSSAKQRLALYTPLSRLKQEVATFSQRAVSDTQMTINRMEQARTEYRGALLWMKDVSQELDPDTLKQMEKFRKVQIQVRNSKASFDKLKMDVCQKVDLLGASRCNMLSHSLATYQRTLLGFWEKTARMMSHIRGAYVGIHPYDFVALKQLQDTPSKLTEDHKEEQIEDSSLPENLNKLVLSDEVVSLESESAIEDHKEKHSQIREFGAAQLSNSENVAKDLPVDSLEDDFEKEFSFLNSLLSPGFSSASELPQECQAVFGSPKASLSSQEPPRGSEPLVHSSRFLPSQLFDLGLRASGAFNSWASQGGELPLSHMENQQVPSGSSKKLTKSPNSGTQDMSAWFNLFADLDPLSNPDAIGHSDDELLTA", "length": 481, "header": "tr|F1SHE9-1|F1SHE9_PIG Isoform 1 of Islet cell autoantigen 1 like OS=Sus scrofa OX=9823 GN=ICA1L PE=4 SV=3 CANONICAL=F1SHE9-1" }, "locus": { "chromosome": "15", "start_pos": 106348468, "end_pos": 106297561, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049114.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049114.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044418.3", "url": "https://www.ensembl.org/id/ENSSSCP00000044418.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q3TY65-1", "protein_name": "Islet cell autoantigen 1-like protein", "gene_name": "Ica1l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEQLRAEDNQSVVSRMQKNYWRTKQVFIKATGKKEDEHVVASDAELDAKLEVFHSIQETCNELVKIVEKYQLRLNVISEEENELGLFLKFQAERDSTQAGEMMDAAGKALCSSAKQRLALCTPLSRLKQEVATFSQRAISDTLVTINRMERARTEYRGALLWMKDASQELDPDTFKQMEKFRKVQNQVRNSKDSFDKLKKDVCQKVDLLGASRCNMLSHSLTTYQRTLLGFWEKTAQMMTQIQEACAGFHPYDFLALKRLQDTPGNLTADCTEGQTEGSCLTTDLNKVALSEEEEEERFEREPAVARALPRDSLEGDDFEKEFSFLNSLLSPTSSSASEFTQECQPACGSPCTGLTSQEPSVGPGSLTSSSQFLPSQLFDLGLHADGAFNTPNNGNQDMSAWFNLFADLGPLSNPDAIGHSDDELLNA", "length": 431 }, "evidence": [ { "id": "F1SHE9", "url": "https://omabrowser.org/oma/group/F1SHE9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6RUG5-1", "protein_name": "Islet cell autoantigen 1-like protein", "gene_name": "Ica1l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSFEHLRPEDSQSVVSRMQKKYWKTKQVFIKATGKKEDEHVVASDAELDAKLEVFHSIQETCNELVKAVEKYQLRLNVISEEENELGLFLTFQAERDATQAGKMMGAAGKALCSSAKQRLALCTPLSRLKQEVATFSQRAISDTSVTINRMERARTEYRGALLWMKDASQELDPDTFKQVEKFRKVQIQVRNSKDCFDKLKMDVCQKVDLLGASRCNMLSHSLATYQRTLLGFWEKTAQMMSQIQEACAGFHPYDFMALKQLQDTPGNLTAEDKEEQTEGSCLSTNLNKVALSEEEERFEREPAVARALPRDSLEGDDFEKEFSFLSSLLSPTSSRASECTQECQPACGSPSLMCQEPSLGPGPLTSSSQFLPSRLFDLGLHADGAFNSWASQEGSEHSDTLPVPSQHPKKLKYLGPLSNPDAIGHSDDELLNA", "length": 435 }, "evidence": [ { "id": "F1SHE9", "url": "https://omabrowser.org/oma/group/F1SHE9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8NDH6-1", "protein_name": "Islet cell autoantigen 1-like protein", "gene_name": "ICA1L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDSFGQPRPEDNQSVVRRMQKKYWKTKQVFIKATGKKEDEHLVASDAELDAKLEVFHSVQETCTELLKIIEKYQLRLNVISEEENELGLFLKFQAERDATQAGKMMDATGKALCSSAKQRLALCTPLSRLKQEVATFSQRAVSDTLMTINRMEQARTEYRGALLWMKDVSQELDPDTLKQMEKFRKVQMQVRNSKASFDKLKMDVCQKVDLLGASRCNMLSHSLTTYQRTLLGFWKKTARMMSQIHEACIGFHPYDFVALKQLQDTPSKISEDNKDEQIGGFLTEQLNKLVLSDEEASFESEQANKDHNEKHSQMREFGAPQFSNSENVAKDLPVDSLEGEDFEKEFSFLNNLLSSGSSSTSEFTQECQTAFGSPSASLTSQEPSMGSEPLAHSSRFLPSQLFDLGFHVAGAFNNWVSQEESELCLSHTDNQPVPSQSPKKLTRSPNNGNQDMSAWFNLFADLDPLSNPDAIGHSDDELLNA", "length": 482 }, "evidence": [ { "id": "F1SHE9", "url": "https://omabrowser.org/oma/group/F1SHE9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "membrane bending", "id": "GO:0097753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097753", "evidence": [ { "database": "UniProtKB", "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" } ], "pmid": "" }, { "name": "regulation of secretion", "id": "GO:0051046", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051046", "evidence": [ { "database": "UniProtKB", "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein domain specific binding", "id": "GO:0019904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019904", "evidence": [ { "database": "UniProtKB", "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" } ], "pmid": "" }, { "name": "membrane curvature sensor activity", "id": "GO:0140090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140090", "evidence": [ { "database": "UniProtKB", "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "secretory granule membrane", "id": "GO:0030667", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030667", "evidence": [ { "database": "UniProtKB", "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" } ], "pmid": "" }, { "name": "acrosomal vesicle", "id": "GO:0001669", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001669", "evidence": [ { "database": "UniProtKB", "id": "F1SHE9", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 12, "end_pos": 14, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SHE9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHE9" }, { "id": "PS50870", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50870" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AH", "eco_id": "ECO_0000259", "start_pos": 44, "end_pos": 247, "start_aa": "Ala", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 12, "end_pos": 14 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SHF7-1", "uniprot_ac": "F1SHF7", "uniprot_id": "F1SHF7_PIG", "mass": { "chemical_mass": 131793.0, "monoisotopic_mass": 131793.0 }, "refseq": {}, "gene_names": [ { "name": "HEATR5A", "type": "recommended", "evidence": [ { "id": "F1SHF7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHF7" } ] } ], "protein_names": [ { "name": "HEAT repeat containing 5A", "type": "synonym", "evidence": [ { "id": "F1SHF7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHF7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SHF7", "url": "https://www.uniprot.org/uniprotkb/F1SHF7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HEATR5A", "url": "https://www.uniprot.org/uniprotkb/F1SHF7", "locus": {} } ], "crossref": [ { "id": "F1SHF7", "url": "https://alphafold.ebi.ac.uk/entry/F1SHF7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000001970", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001970", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040108", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040108", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046837", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046837", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21663", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21663", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21663:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21663:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF20210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25468", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25468", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SHF7", "url": "https://www.uniprot.org/uniprotkb/F1SHF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHF7-1", "url": "https://www.uniprot.org/uniprotkb/F1SHF7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFLKGWVFFFFFSFLHFDVAISKGHLGPEEMRRPVLALLMGALESPNPLLRCAAAEAWARLAQVVNDGVFTAALAQVSFDKLKSARDAVTRTGHSLALGSLHRYLGGISSSQHLNSCVGILYTLSQDSTSPDVQTWALHSLSLIIDSAGPLFYTHVEPTLSLIIMLLLNVPPTHAEVHQSLGRCLNTLITTLGPELQGNSTYISALRTSCLLGCAVMQDNPDCLVQAQAISCLQQLHMFAPRHVNLSSLVSCLCVNLCSPYLLLRRAVLACLRQLVQREAAEVSEHAVMLAKDSRKELTLAGCRHHDDANIREVGLEGALLTLLDRETDQKLCCDIKETLNHMLTSMAVDKLSFWLKLCKDVLAASADFTAVTCVDTMQEEEGDKGDDASVLTTRNDGRPHPFTNPRWATRVFAAECVCRIINQCENAHSAHFDIALAQEMKKRDSRNDFLVLHLADLIRMAFMAATDHSDQLRLSGLETLLVVIRQFATIPEPEFPGHVILEQYQANVGAALRPAFTSETPPDVTAKACQVCSAWIASGVVSDLNDLRRVHQLLVSSLTKIQVGKEALSHLYNESTSTMEILAVLKAWAEVKECVRNGSISSDGLLDLVHTDLGTLSRLWLAALQDFALLTLPSEFASQLPVEGGAFYTAETSENAKLHYYHSWALILHATALWLTSTGFVVADPDEGAPNLSRPVTPTSMCQGSSSEATVKSPEDVYTERFHLILGISVEFLCSLRSDATMESITACLHALQALLDVPWPRSKIGSDQELGIELLNVLHRVILTRESPSIQLASLEVVRQIICAAQEHVKEKRRSAEVDDGAAEKETLPEFGEGKDTGGLVPGKSLVFATLELCVCILVRQLPELNPKLTGSPGVKGAKPQMLSEDGSRLVSAALVILSELPAVCSPEGSISILPTILYLTIGVLRETAVKLPGGQLSSTVAASLQALKGILSSPMARAEKSRAAWTDLLRSALTTVLDYGTHQELDEVSLLTAVTVFILSTCPEVTTISCLQKRCIEKFKATLRINDPMVQIKTYQLLLSIFQYPNPTVSYPYIYSLVSPILEKLQEIDKRKPQDTTELQIFQEGIKVLEALVAIAEEQHRSQLVACLLPILISFLLDENALGSATSIMRNLHDFALQKLMQIGPQYSSVFKSVMASSPALKARLEAAIKGNQESVKVKIPTSKHTKNSGKNLSIQLKTNFL", "length": 1205, "header": "tr|F1SHF7-1|F1SHF7_PIG Isoform 1 of HEAT repeat containing 5A OS=Sus scrofa OX=9823 GN=HEATR5A PE=3 SV=5 CANONICAL=F1SHF7-1" }, "isoforms": [ { "isoform_ac": "F1SHF7-1", "url": "https://www.uniprot.org/uniprotkb/F1SHF7/entry#F1SHF7-1", "sequence": { "sequence": 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"GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHF7", "url": "https://www.uniprot.org/uniprotkb/F1SHF7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": 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"ENSSSCP00000046097.3", "url": "https://www.ensembl.org/id/ENSSSCP00000046097.3" } ] } }, { "isoform_ac": "F1SHG4-1", "url": "https://www.uniprot.org/uniprotkb/F1SHG4/entry#F1SHG4-1", "sequence": { "sequence": "MTRGFAPSLPVEFPKMGSFRRPRPRFMSSPALSDLPRFQAARQALQLSSNSAWNSVQTAVINVFKGGGLQSNELYALNENIRRLLKSELGSFITDYFQNQLLAKGLLFVEEKIKLCEGANRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLDDLLLLAQPQPPSSIIQMLLILQSVHEPTGPTEGYLQLEELVKQVVSPFLGISEDRGISGPVYTLARRHSRVRPKVTLLNYAAPVSRPLNEMALTPLTEQEGEAYLEKCGSIRRHTVANAHSDIQLLAMATMMHSGLGEEAGSEDKCLLLPPSFPPPHRQCSSEPNITDSPEEPEQVAAGSQEDSELNCASLS", "length": 365, "header": "tr|F1SHG4-1|F1SHG4_PIG Isoform 1 of Proline rich 5 like OS=Sus scrofa OX=9823 GN=PRR5L PE=3 SV=1 CANONICAL=F1SHG4-1" }, "locus": { "chromosome": "2", "start_pos": 24708072, "end_pos": 24647732, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014517.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014517.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014124.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014124.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 204, "start_aa": "Thr", "end_pos": 204, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr204", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523837", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523837", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2QKS7-1", "protein_name": "Proline-rich protein 5-like", "gene_name": "Prr5l", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTRGLAPLLPIEFHKMGSFRRPRPRFMSSPVLSELPRFQAARQALQLSSNSAWNSVQTAVINVFKGGGLQSNELYALNENIRRLLKSELGSFITDYFQNQLLAKGLSFVEEKIKQCEGESRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDSLLLAQSKLPSSVVQMLLILQSVHEPTGPTEGYLQLEELVKQVVSPFLGISGDRSCAGPTYSLARRHSRVRPKVTVLNYASLMSSVGREMVLTPLTEQEGEAYLEKCGSVRRHTVANAHSDIQLLAMATMMHSGLGEEAGSEDKHLLLPPSFPPPHRQCSSEPSILDSPDELELEDVASGSQEDSGMNCASLS", "length": 367 }, "evidence": [ { "id": "F1SHG4", "url": "https://omabrowser.org/oma/group/F1SHG4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A1L1K1-1", "protein_name": "Proline-rich protein 5-like", "gene_name": "Prr5l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTRGLAPLLPIEFHKMGSFRRPRPRFMSSPLLSELPRFQAARQALQLSSNSAWNSVQTAVINVFKGGGLQSNELYALNESIRRLLKSELGSFITDYFQNQLLAKGLSFVEEKIKQCEGDNRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDLLLLSQSKLPSSVIQMLLILQSVHEPTGPSEGYLQLEELVKQVVSPFLGLSGDRSCSRPTHSLARRHSRVRPKVTVLNYASLMTTVGRPLNEMVLTPLTEQEGEAYLEKCGSVRRHTVANAHSDIQLLAMATMMHSGLGEESGSEDKHLLLPPTFPPPHRQCSSEPSILDSPDEMELEDVASGSQEDSELNCASLS", "length": 370 }, "evidence": [ { "id": "F1SHG4", "url": "https://omabrowser.org/oma/group/F1SHG4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A2AVJ5-1", "protein_name": "Proline-rich protein 5-like", "gene_name": "Prr5l", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTRGLAPLLPIEFHKMGSFRRPRPRFMSSPVLSELPRFQAARQALQLSSNSAWNSVQTAVINVFKGGGLQSNELYALNESIRRLLKSELGSFITDYFQNQLLAKGLSFVEEKIKLCEGDNRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDVLLLAQSKLPSSVIQMLLILQSVHEPTGPSEGYLQLEELVKQVVSPFLSISGDRSCSGPTYSLARRHSRVRPKVTVLNYASLMTTVGRPLNEMVLTPLTEQEGEAYLEKCGSVRRHTVANAHSDIQLLAMATMMHSGLGEEAGGEDKHLLLPPSFPPPHRQCSSEPSILDSPDELELEDVASGSQEDSELNCASLS", "length": 370 }, "evidence": [ { "id": "F1SHG4", "url": "https://omabrowser.org/oma/group/F1SHG4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1C6K7-1", "protein_name": "Proline rich 5 like", "gene_name": "PRR5L", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTGGFTVAPSFALQLHKMGSFRRPRPRFMSSPVLSDLPRFQAARQALQLSSNSAWNSVQTAVINVFKGGGLQNNELYTLNENIRRLLKSELGSFITDYFQNQLLAKGLLFIEEKVKLCEGEDRIDILSEIWDHYFTETLPTLQAIFYPVQGQELTIRQIALLGFRDLVLLKVKLEEILPLVQTKLPASIVQMLLILQSVHEPDGPSESYLQLEELVKQVVSPYLGLCEDHSFSGSTCLLERRYSRSRSKAGGLTYSSHLVTNRQPSEMALTPLTEQEGEAYLEKCGSIRRHTVANAHSDIQLLAMASMMHTGMVIEESDSNDKCLLLQPSFSHRQCSSEPSIADGPEGGMATGRQDSAELNCTSVS", "length": 366 }, "evidence": [ { "id": "F1SHG4", "url": "https://omabrowser.org/oma/group/F1SHG4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6MZQ0-1", "protein_name": "Proline-rich protein 5-like", "gene_name": "PRR5L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTRGFAPILPVEFHKMGSFRRPRPRFMSSPVLSDLPRFQAARQALQLSSSSAWNSVQTAVINVFKGGGLQSNELYALNENIRRLLKSELGSFITDYFQNQLLAKGLFFVEEKIKLCEGENRIEVLAEVWDHFFTETLPTLQAIFYPVQGQELTIRQISLLGFRDLVLLKVKLGDLLLLAQSKLPSSIVQMLLILQSVHEPTGPSESYLQLEELVKQVVSPFLGISGDRSFSGPTYTLARRHSRVRPKVTVLNYASPITAVSRPLNEMVLTPLTEQEGEAYLEKCGSVRRHTVANAHSDIQLLAMATMMHSGLGEEASSENKCLLLPPSFPPPHRQCSSEPNITDNPDGLEEGARGSQEGSELNCASLS", "length": 368 }, "evidence": [ { "id": "F1SHG4", "url": "https://omabrowser.org/oma/group/F1SHG4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "X1WFB5-1", "protein_name": "Proline-rich protein 5-like isoform X1", "gene_name": "prr5l", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGSLRKPRPRFMSSPVLSDLARFHASSPTLQLSNASVWNSVQTAVIKVFEGGGLQPNELYTLNESIRWLLRTELGSFITEYFQDQLLNKGLTSILEQIQLHDDENRLQALSEMWVRFFTEILPTLQAIFYPVQGQELTVRQMALLGFRNMVLLKLSLEKVLQDSSCPSSITQMLLILQGIHEPNGPTQEYFLLERLVEMVISPYLSNYLKRSPSDSSSEGNRLVNTPHLAQPEIMVTHFAHESFLAPLIEHEGEAYLERTAGVRRHTVANVQSDIQLLTMNNRMHSEKVEVSGTSRTTKTESKRTPKTPFCSEPAFFDSLPSGMEIRRGQSNAEMKCGLTS", "length": 341 }, "evidence": [ { "id": "F1SHG4", "url": "https://omabrowser.org/oma/group/F1SHG4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "regulation of fibroblast migration", "id": "GO:0010762", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010762", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "pmid": "" }, { "name": "positive regulation of intracellular protein transport", "id": "GO:0090316", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090316", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "pmid": "" }, { "name": "cellular response to oxidative stress", "id": "GO:0034599", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034599", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "pmid": "" }, { "name": "positive regulation of mRNA catabolic process", "id": "GO:0061014", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061014", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "pmid": "" }, { "name": "TORC2 signaling", "id": "GO:0038203", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038203", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin protein ligase binding", "id": "GO:0031625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031625", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "TORC2 complex", "id": "GO:0031932", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031932", "evidence": [ { "database": "UniProtKB", "id": "F1SHG4", "url": "https://www.uniprot.org/uniprotkb/F1SHG4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 338, "end_pos": 340, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SHG4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 365, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SHG4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SHG4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 204 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 338, "end_pos": 340 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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}, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SHH4-1", "uniprot_ac": "F1SHH4", "uniprot_id": "F1SHH4_PIG", "mass": { "chemical_mass": 32838.0, "monoisotopic_mass": 32838.0 }, "refseq": { "ac": "XP_001928405", "name": "E2F-associated phosphoprotein isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928405" }, "gene_names": [ { "name": "EAPP", "type": "recommended", "evidence": [ { "id": "F1SHH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHH4" } ] }, { "name": "EAPP", "type": "synonym", "evidence": [ { "id": "XP_001928405", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928405" } ] } ], "protein_names": [ { "name": "E2F associated phosphoprotein", "type": "synonym", "evidence": [ { "id": "F1SHH4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHH4/entry#names_and_taxonomy" } ] }, { "name": "E2F-associated phosphoprotein isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001928405", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928405" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SHH4", "url": "https://www.uniprot.org/uniprotkb/F1SHH4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EAPP", "url": "https://www.uniprot.org/uniprotkb/F1SHH4", "locus": { "chromosome": "7", "start_pos": 65263272, "end_pos": 65240220, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001960", "url": "https://www.ensembl.org/id/ENSSSCG00000001960" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001960", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001960", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153549", "url": "https://www.ncbi.nlm.nih.gov/gene/100153549", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019370", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019370", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153549", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153549", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CFVNKEE", "url": "https://omabrowser.org/oma/group/CFVNKEE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SHH4", "url": "https://www.orthodb.org/?gene=F1SHH4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15967", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15967", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15967:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15967:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10238", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10238", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001928405", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928405", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SHH4", "url": "https://www.uniprot.org/uniprotkb/F1SHH4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHH4-1", "url": "https://www.uniprot.org/uniprotkb/F1SHH4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNRLQGDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTLKTMEDKLSSLETGSSSGHGKVGTAPTKYYDDIYFDSDSEDEDKAAQGTKKKKKKQHRIPTNDELLYDPEKDNRDQAWVDAQRRGYHGFGIQRPRQQQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSVNKEEILRYKTPENRKKRRGHKKMKSNHEDAAEQAETNVEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS", "length": 286, "header": "tr|F1SHH4-1|F1SHH4_PIG Isoform 1 of E2F associated phosphoprotein OS=Sus scrofa OX=9823 GN=EAPP PE=4 SV=2 CANONICAL=F1SHH4-1" }, "isoforms": [ { "isoform_ac": "F1SHH4-1", "url": "https://www.uniprot.org/uniprotkb/F1SHH4/entry#F1SHH4-1", "sequence": { "sequence": "MNRLQGDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTLKTMEDKLSSLETGSSSGHGKVGTAPTKYYDDIYFDSDSEDEDKAAQGTKKKKKKQHRIPTNDELLYDPEKDNRDQAWVDAQRRGYHGFGIQRPRQQQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSVNKEEILRYKTPENRKKRRGHKKMKSNHEDAAEQAETNVEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS", "length": 286, "header": "tr|F1SHH4-1|F1SHH4_PIG Isoform 1 of E2F associated phosphoprotein OS=Sus scrofa OX=9823 GN=EAPP PE=4 SV=2 CANONICAL=F1SHH4-1" }, "locus": { "chromosome": "7", "start_pos": 65262912, "end_pos": 65240317, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002193.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002193.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002142.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002142.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHH4", "url": "https://www.uniprot.org/uniprotkb/F1SHH4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153549", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153549", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A061I3H2-1", "protein_name": "E2F-associated phosphoprotein", "gene_name": "Eapp", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNRLQDDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTIKTMEDKLSSMGTGGSSAVGNVGGVTAKYYDDIYFDSDSEDEDKAAQVTKKKKKKQRRIPTNDELLYDPEKDNRDQAWVDAQRRGYHAFGLQRPHQKQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSVNREEVLRYKNPENRKKKRGAKKMRSNAEGPVETEEEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS", "length": 283 }, "evidence": [ { "id": "F1SHH4", "url": "https://omabrowser.org/oma/group/F1SHH4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0XJI1-1", "protein_name": "E2F associated phosphoprotein", "gene_name": "EAPP", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSRLREEDDPYVVEEPSDEERALSSSEDEVDVLLHGTPDQKRKLLRECLTGESESSSDDEFQKEMEAELNTTVRNIEGKWKSPEMGTSSSTGEAGSATTSKYYDDVYFDSDSEDEDKTVMQDVQKKRKHQQRRILTNDELLYDPEEDSRDQEWVDSQRRRYRNQRRVLQPQQTKPSSVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCFVNKEEILKYRKKVKKRNKKRKHSEETTPAQSNQEEEEVYHPVLCTECSTEVAVMDKDEVFHFFNVLASHS", "length": 287 }, "evidence": [ { "id": "F1SHH4", "url": "https://omabrowser.org/oma/group/F1SHH4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B5DF09-1", "protein_name": "E2F-associated phosphoprotein", "gene_name": "Eapp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNRLQDDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSEDEFEKEMEAELNSTMKTVEDKLSSLGTGSSSGVAKVGGVTTKYYDAVYFDSDSEDEDKAVTKKKKKKQHRIPTNDELLYDPEKDSRDQAWVDAKRRGYHAFGLQRPCQKQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSINREEVLRYKNSDNRKKRRSAKKMRSNPEDLAEREVEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS", "length": 280 }, "evidence": [ { "id": "F1SHH4", "url": "https://omabrowser.org/oma/group/F1SHH4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q56P03-1", "protein_name": "E2F-associated phosphoprotein", "gene_name": "EAPP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNRLPDDYDPYAVEEPSDEEPALSSSEDEVDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTMKTMEDKLSSLGTGSSSGNGKVATAPTRYYDDIYFDSDSEDEDRAVQVTKKKKKKQHKIPTNDELLYDPEKDNRDQAWVDAQRRGYHGLGPQRSRQQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSINKEEVLRYKASENRKKRRVHKKMRSNREDAAEKAETDVEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS", "length": 285 }, "evidence": [ { "id": "F1SHH4", "url": "https://omabrowser.org/oma/group/F1SHH4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5BU09-1", "protein_name": "E2F-associated phosphoprotein", "gene_name": "Eapp", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNRLQDDYDPYAVEEPSDEEPALSSSEDELDVLLHGTPDQKRKLIRECLTGESESSSEDEFEKEMEAELNSTMKTMEDQLSSLGTGSSSGVAKVGGVTEKFYDEIYFDSDSEDEDKTVTKKKKKKQHRIPTNDELLYDPEKDNRDQAWVDAKRRGYHAFGLQRPRQKQQPVPNSDAVLNCPACMTTLCLDCQRHESYKTQYRAMFVMNCSINREEVLRYKNPENRRKRRSAKKMRSNPEDPAEREAEEIYHPVMCTECSTEVAVYDKDEVFHFFNVLASHS", "length": 281 }, "evidence": [ { "id": "F1SHH4", "url": "https://omabrowser.org/oma/group/F1SHH4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SHH4", "url": "https://www.uniprot.org/uniprotkb/F1SHH4" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F1SHH4", "url": "https://www.uniprot.org/uniprotkb/F1SHH4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" }, { "start_pos": 70, "end_pos": 72, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 210, "end_pos": 212 }, { "start_pos": 70, "end_pos": 72 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SHH9-1", "uniprot_ac": "F1SHH9", "uniprot_id": "F1SHH9_PIG", "mass": { "chemical_mass": 64441.0, "monoisotopic_mass": 64441.0 }, "refseq": {}, "gene_names": [ { "name": "ACCSL", "type": "recommended", "evidence": [ { "id": "F1SHH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHH9" } ] } ], "protein_names": [ { "name": "1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like", "type": "synonym", "evidence": [ { "id": "F1SHH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHH9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SHH9", "url": "https://www.uniprot.org/uniprotkb/F1SHH9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ACCSL", "url": "https://www.uniprot.org/uniprotkb/F1SHH9", "locus": { "chromosome": "2", "start_pos": 18271070, "end_pos": 18281431, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000057793", "url": "https://www.ensembl.org/id/ENSSSCG00000057793" } ] } } ], "crossref": [ { "id": "F1SHH9", "url": "https://alphafold.ebi.ac.uk/entry/F1SHH9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000040937", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000040937", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00609", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00609", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR004839", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004839", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015421", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015421", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015422", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015422", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015424", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015424", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR43795", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43795", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43795:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43795:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00155", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00155", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SHH9", "url": "https://www.uniprot.org/uniprotkb/F1SHH9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHH9-1", "url": "https://www.uniprot.org/uniprotkb/F1SHH9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSNPSDISPTPCGQTGDQTLRNHSIYTQLMETVLSFMKLMTGTSQDPALEEQKDSQASREQEALLGHLMIQTVKHLQSGVTGGHKFQLPCPSMHSRDNVRGGQQAQSSRKTCRDTFISSDLSSRGLDISSLYHSSFQDYNTYQGNKYDKKNNTLGFINLGTSENKLCIDLLTERLRRSDMNYVDDNLLQYPDWRGQPFLRKEVAQFLTTYCKAPAHLDPENVVVLNSCSSVLSSLAMVLCDPGEAFLVPTPFSSGFIFSACLYAKVELLPVHLDSWVSGANTSPFQLSVGKLEQVLFEAKMEGKKVRGLLLTNPQNPLGDVYSRDSLMDYLEFAKRYHLHVIIDEIYMLTVFDEAITFHSVLSIESLPDPSKTHVIWGTSKDFGISGLCFGALYTFNKAVASAVSSFGSLHSISSIAQYKLRQLLQDREWLDSTYLPINHFRLRTAHKYITNELKALNVPFLNRGSGLFVWINLRKYLHPCTFEEELLLHRHFLDKKLILSPGKSFMCKDPGWFRLVFADNHLLLRSAMHRFHQVLLEQERNWTRRQLEDAIEEDLLTSNTAAATNLKG", "length": 569, "header": "tr|F1SHH9-1|F1SHH9_PIG Isoform 1 of 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like OS=Sus scrofa OX=9823 GN=ACCSL PE=4 SV=4 CANONICAL=F1SHH9-1" }, "isoforms": [ { "isoform_ac": "F1SHH9-1", "url": "https://www.uniprot.org/uniprotkb/F1SHH9/entry#F1SHH9-1", "sequence": { "sequence": "MSNPSDISPTPCGQTGDQTLRNHSIYTQLMETVLSFMKLMTGTSQDPALEEQKDSQASREQEALLGHLMIQTVKHLQSGVTGGHKFQLPCPSMHSRDNVRGGQQAQSSRKTCRDTFISSDLSSRGLDISSLYHSSFQDYNTYQGNKYDKKNNTLGFINLGTSENKLCIDLLTERLRRSDMNYVDDNLLQYPDWRGQPFLRKEVAQFLTTYCKAPAHLDPENVVVLNSCSSVLSSLAMVLCDPGEAFLVPTPFSSGFIFSACLYAKVELLPVHLDSWVSGANTSPFQLSVGKLEQVLFEAKMEGKKVRGLLLTNPQNPLGDVYSRDSLMDYLEFAKRYHLHVIIDEIYMLTVFDEAITFHSVLSIESLPDPSKTHVIWGTSKDFGISGLCFGALYTFNKAVASAVSSFGSLHSISSIAQYKLRQLLQDREWLDSTYLPINHFRLRTAHKYITNELKALNVPFLNRGSGLFVWINLRKYLHPCTFEEELLLHRHFLDKKLILSPGKSFMCKDPGWFRLVFADNHLLLRSAMHRFHQVLLEQERNWTRRQLEDAIEEDLLTSNTAAATNLKG", "length": 569, "header": "tr|F1SHH9-1|F1SHH9_PIG Isoform 1 of 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like OS=Sus scrofa OX=9823 GN=ACCSL PE=4 SV=4 CANONICAL=F1SHH9-1" }, "locus": { "chromosome": "2", "start_pos": 18281431, "end_pos": 18271293, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014507.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014507.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014115.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014115.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 10, "start_aa": "Thr", "end_pos": 10, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr10", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHH9", "url": "https://www.uniprot.org/uniprotkb/F1SHH9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "F1SHH9", "url": "https://www.uniprot.org/uniprotkb/F1SHH9" } ], "pmid": "" }, { "name": "transaminase activity", "id": "GO:0008483", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008483", "evidence": [ { "database": "UniProtKB", "id": "F1SHH9", "url": "https://www.uniprot.org/uniprotkb/F1SHH9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "amino acid metabolic process", "id": "GO:0006520", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006520", "evidence": [ { "database": "UniProtKB", "id": "F1SHH9", "url": "https://www.uniprot.org/uniprotkb/F1SHH9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 151, "end_pos": 153, "annotation": "n_glycosylation_sequon" }, { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" }, { "start_pos": 281, "end_pos": 283, "annotation": "n_glycosylation_sequon" }, { "start_pos": 542, "end_pos": 544, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SHH9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 569, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SHH9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SHH9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SHH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHH9" }, { "id": "PF00155", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00155" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Aminotransferase class I/classII large", "eco_id": "ECO_0000259", "start_pos": 157, "end_pos": 519, "start_aa": "Ile", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 10 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 151, "end_pos": 153 }, { "start_pos": 22, "end_pos": 24 }, { "start_pos": 281, "end_pos": 283 }, { "start_pos": 542, "end_pos": 544 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"uniprot_ac": "F1SHI0", "uniprot_id": "F1SHI0_PIG", "mass": { "chemical_mass": 57482.0, "monoisotopic_mass": 57482.0 }, "refseq": { "ac": "XP_005661034", "name": "1-aminocyclopropane-1-carboxylate synthase-like protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661034" }, "gene_names": [ { "name": "ACCS", "type": "recommended", "evidence": [ { "id": "F1SHI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" } ] }, { "name": "ACCS", "type": "synonym", "evidence": [ { "id": "XP_005661034", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661034" } ] } ], "protein_names": [ { "name": "1-aminocyclopropane-1-carboxylate synthase homolog (inactive)", "type": "synonym", "evidence": [ { "id": "F1SHI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHI0/entry#names_and_taxonomy" } ] }, { "name": "1-aminocyclopropane-1-carboxylate synthase-like protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005661034", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661034" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SHI0", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ACCS", "url": "https://www.uniprot.org/uniprotkb/F1SHI0", "locus": { "chromosome": "2", "start_pos": 18248521, "end_pos": 18264064, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013282", "url": "https://www.ensembl.org/id/ENSSSCG00000013282" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013282", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013282", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00609", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00609", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "106504160", "url": "https://www.ncbi.nlm.nih.gov/gene/106504160", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004839", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004839", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015421", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015421", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015422", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015422", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015424", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015424", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:106504160", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106504160", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PYYGTFV", "url": "https://omabrowser.org/oma/group/PYYGTFV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SHI0", "url": "https://www.orthodb.org/?gene=F1SHI0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43795", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43795", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43795:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43795:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00155", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00155", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005661034", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005661034", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SHI0", "url": "https://www.uniprot.org/uniprotkb/F1SHI0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHI0-1", "url": "https://www.uniprot.org/uniprotkb/F1SHI0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSTLCQKETRTPATCLGSGSTQGLHSSNGDDVERECSRKPDQKPLKCYRVGDPTAMFSPNSPHLSSRGSVIKWFWDSAEEGYRTYHMDEYDEDKNPNGIINLGTSENKLCFDLLTRRLSQSDMLWVEPSLLQYPDWRGHLFLREEVARFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLCEAGEAFLIPAPYYGSITQHVCLYGGVRLVCVYLDSEVTGLETRPFQLTVEKLEMALQGANSEGVKVKGLILINPHNPLGDVYSLGELQEYLDFAKRHELHVIVDEIYLLSVFEKSVEFHSVLSLERLPDSQRTHVMWAASKDFGMSGIRFGTLYTENRDVATAVASLCRYHSLSGLVQYQMAQLFRDRDWINQVYLPENHARLKAAHTYVSEELRALGIPFLSRGAGFFIWANLGKYLPEATFEQEMLLWRRFLDNKVLLSFGKAFECKEPGWFRLVFSDRMHRLRLGMQRVRQVLESESQVAADAPSCQTQEPRGPRSHCED", "length": 506, "header": "tr|F1SHI0-1|F1SHI0_PIG Isoform 1 of 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) OS=Sus scrofa OX=9823 GN=ACCS PE=4 SV=1 CANONICAL=F1SHI0-1" }, "isoforms": [ { "isoform_ac": "F1SHI0-1", "url": "https://www.uniprot.org/uniprotkb/F1SHI0/entry#F1SHI0-1", "sequence": { "sequence": "MSTLCQKETRTPATCLGSGSTQGLHSSNGDDVERECSRKPDQKPLKCYRVGDPTAMFSPNSPHLSSRGSVIKWFWDSAEEGYRTYHMDEYDEDKNPNGIINLGTSENKLCFDLLTRRLSQSDMLWVEPSLLQYPDWRGHLFLREEVARFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLCEAGEAFLIPAPYYGSITQHVCLYGGVRLVCVYLDSEVTGLETRPFQLTVEKLEMALQGANSEGVKVKGLILINPHNPLGDVYSLGELQEYLDFAKRHELHVIVDEIYLLSVFEKSVEFHSVLSLERLPDSQRTHVMWAASKDFGMSGIRFGTLYTENRDVATAVASLCRYHSLSGLVQYQMAQLFRDRDWINQVYLPENHARLKAAHTYVSEELRALGIPFLSRGAGFFIWANLGKYLPEATFEQEMLLWRRFLDNKVLLSFGKAFECKEPGWFRLVFSDRMHRLRLGMQRVRQVLESESQVAADAPSCQTQEPRGPRSHCED", "length": 506, "header": "tr|F1SHI0-1|F1SHI0_PIG Isoform 1 of 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) OS=Sus scrofa OX=9823 GN=ACCS PE=4 SV=1 CANONICAL=F1SHI0-1" }, "locus": { "chromosome": "2", "start_pos": 18264064, "end_pos": 18248631, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014506.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014506.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014114.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014114.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHI0", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:106504160", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106504160", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A2AIG8-1", "protein_name": "1-aminocyclopropane-1-carboxylate synthase-like protein 1", "gene_name": "Accs", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFCLPQQESTAPTTCTGSASTQDMDSGYGDGLQGECLRKPDQTQPKLYGVGDPTATFSSDSSCLSSRGRVIKWFWDSAEEGYRTYHMDEYDEDKNPSGIINLGTSENKLCFDLLSWRLTQGDMLHVEPSLLQYPDWRGHLFLREEVAKFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLCEAGEALLIPTPYYGAITQHIYLYGNVRLAYVYLDSKVTGLNTRPFQLTVEKLEMVLQGVSSEGVKVKGLILINPQNPLGDVYSPEELQDFLRFAMRHKLHVIMDEVYMLSVFEESLGYRSVLSLERLPDPQRTHVMWATSKDFGMSGLRFGVLYTENQHVATAVASLCRYHGLSGLVQHQMAQLLRDHDWISQVYLPENHARLKAAHTYVSEELRALGIPFVSRGAGFFIWVDLRKYLCKGTFEEEALLWRQFLDNKVLLSSGKTFECKEPGWFRVVFSDKENRLRLGMQRMRQVLEGQSQVVEDASPCHAQEPQSQPR", "length": 502 }, "evidence": [ { "id": "F1SHI0", "url": "https://omabrowser.org/oma/group/F1SHI0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LXH1-1", "protein_name": "1-aminocyclopropane-1-carboxylate synthase-like", "gene_name": "Accs", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSENGKEVSSQAAKTESSTQTPSHWESIHSKPRDQLKKRSSRKKAFKILQEKMLKLQCVFMDHFLQRTSQQMQCLPPGDQQCTRASRKQEKKMGFLLSQIINHIWSNTVKKLKFKVPPLPCSDSRCGIKAGHQALSSWQTGQPRPRLGDFEDAFADRTLSKRGTGIYEFYHLSFQGYEAYQTDKYHQDKNPSGYINLSTSENKLCLDLITARLTQCDMNFLDEAQLQYSDWKGEPSLREELASFLTHYCKAPTPLDPENVVVLNGCSSVFSSLVMVLCDPGDALLIPTPCYSGFTFSSYLYSKVELIPVYLESQVTETNKYSFQLTVDKLKLTLTQAKKKGKKVKGLVLINPQNPLGDVYTQGSLQEYLVFAKKHKLHVIMDEIYMLSVFEPTVTFHSILSIENLPDPNMIHMIWGTSKDFGMSGIRFGVLYTHNKEVASAMKAFGYHHSVSGIIQYKLRQLLQDKEWINKVYLPKNHSRLREAYSYVTKMLEDLKIPFCNCGSGLFVWINLKAYLNPCTFDQEQILHQRFQDKKLLLSSGKSFMCIEPGWFRLVFAEKHPQLQVVSGRQGSVEDPELPPLRPRGRVRTPSLCPRQVARGQATPVSRKYSPKNTARENPRSKVGAAIRHCTPKRPGSQPGSLNRFLPLGLEILSAVTLQTLWFRKTRAGPADHSVLVASFGLIFCLPQKDSTVPTTCTGSASTQDMESGYGDDLQGECLRKPDQKQPKLYGVGDPTATFSSDSFCLSSRGRVIKWFWDSAEEGYRTYHMDEYDEDKNPSGIINLGTSENKLCFDLLSWRLTQNDMLHVEPSLLQYPDWRGHRFLRKEVARFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLCEPGEVLLIPTPYYGAITQHIYLYGNIRLAYVYLDSKVTGLNTRPFQLTVEKLEMALQGVNSEGVKVKGLILINPQNPLGDIYSPEELQDFLGFAMRHKLHVIMDEVYMLSVFEESLGYRSVLSLERLPDPQRTHVMWATSKDFGMSGLRFGVLYTENQHVATAVASLCRYHGLSGLVQHQMAQLLQDHDWISQVYLPENHARLKAAHTYVSEELRALGIPFVSRGAGFFIWVDLRKYLREGTFEEEAMLWRRFLDNKVLLSSGKTFECKEPGWFRVVFSDKENRLRLGMQRMRQVLKGQSQMVEDASRCHTQELQ", "length": 1180 }, "evidence": [ { "id": "F1SHI0", "url": "https://omabrowser.org/oma/group/F1SHI0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q54SH3-1", "protein_name": "1-aminocyclopropane-1-carboxylate synthase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNYKSFSKNAKKILNSPICNNKMQTAHYTAMENLFCPETNKDGYISLGIAENVLSFDVMKDKLSVDPNFCQRLTQYSDMGGFRDCRESIANLLQNHLFKYKPINKPELLVNYKQIILANGATPLLENIFNMFCDQDEVALIPSPMFPNFIPFAGQRFGVKIVGVKSEVYNHDNTNNNNDNKIIDFELNLEEFEKQYQLHPVKLVVLCNPNNPTGYIFSKKQIKQLVDWCRKKKIHLLSDEIYALSIFNGNYCSGTREDNEDGNGNDDNDDDIFEKDGANFEIPTNSFSSIYDICKGDMGEYVHLVSSFSKDFGLNGFRAGYFFSQNLDVQRYLLSTSNYYSCSNIVQSALINIIEDKKYLCSFIKENQKRLTSSYNFATKTLEHFNIPYLKSSAGLFITIDLRKCLNKLPSSLELKDNDCPFKKEIQLWELLFENKVFLNPGKLCYFDEPGFYRLIFTLSNEFVYNGIERISKVYNQLLLNN", "length": 483 }, "evidence": [ { "id": "F1SHI0", "url": "https://omabrowser.org/oma/group/F1SHI0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q96QU6-1", "protein_name": "1-aminocyclopropane-1-carboxylate synthase-like protein 1", "gene_name": "ACCS", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFTLPQKDFRAPTTCLGPTCMQDLGSSHGEDLEGECSRKLDQKLPELRGVGDPAMISSDTSYLSSRGRMIKWFWDSAEEGYRTYHMDEYDEDKNPSGIINLGTSENKLCFDLLSWRLSQRDMQRVEPSLLQYADWRGHLFLREEVAKFLSFYCKSPVPLRPENVVVLNGGASLFSALATVLCEAGEAFLIPTPYYGAITQHVCLYGNIRLAYVYLDSEVTGLDTRPFQLTVEKLEMALREAHSEGVKVKGLILISPQNPLGDVYSPEELQEYLVFAKRHRLHVIVDEVYMLSVFEKSVGYRSVLSLERLPDPQRTHVMWATSKDFGMSGLRFGTLYTENQDVATAVASLCRYHGLSGLVQYQMAQLLRDRDWINQVYLPENHARLKAAHTYVSEELRALGIPFLSRGAGFFIWVDLRKYLPKGTFEEEMLLWRRFLDNKVLLSFGKAFECKEPGWFRFVFSDQVHRLCLGMQRVQQVLAGKSQVAEDPRPSQSQEPSDQRR", "length": 501 }, "evidence": [ { "id": "F1SHI0", "url": "https://omabrowser.org/oma/group/F1SHI0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9STR4-1", "protein_name": "1-aminocyclopropane-1-carboxylate synthase 7", "gene_name": "ACS7", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGLPLMMERSSNNNNVELSRVAVSDTHGEDSPYFAGWKAYDENPYDESHNPSGVIQMGLAENQVSFDLLETYLEKKNPEGSMWGSKGAPGFRENALFQDYHGLKTFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPNDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNHFQITPEALESAYQTARDANIRVRGVLITNPSNPLGATVQKKVLEDLLDFCVRKNIHLVSDEIYSGSVFHASEFTSVAEIVENIDDVSVKERVHIVYSLSKDLGLPGFRVGTIYSYNDNVVRTARRMSSFTLVSSQTQHMLASMLSDEEFTEKYIRINRERLRRRYDTIVEGLKKAGIECLKGNAGLFCWMNLGFLLEKKTKDGELQLWDVILKELNLNISPGSSCHCSEVGWFRVCFANMSENTLEIALKRIHEFMDRRRRF", "length": 447 }, "evidence": [ { "id": "F1SHI0", "url": "https://omabrowser.org/oma/group/F1SHI0/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "pyridoxal phosphate binding", "id": "GO:0030170", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030170", "evidence": [ { "database": "UniProtKB", "id": "F1SHI0", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1SHI0", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" } ], "pmid": "" }, { "name": "transaminase activity", "id": "GO:0008483", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008483", "evidence": [ { "database": "UniProtKB", "id": "F1SHI0", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "amino acid metabolic process", "id": "GO:0006520", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006520", "evidence": [ { "database": "UniProtKB", "id": "F1SHI0", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SHI0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHI0" }, { "id": "PF00155", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00155" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Aminotransferase class I/classII large", "eco_id": "ECO_0000259", "start_pos": 124, "end_pos": 461, "start_aa": "Leu", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SHJ3-1", "uniprot_ac": "F1SHJ3", "uniprot_id": "F1SHJ3_PIG", "mass": { "chemical_mass": 134179.0, "monoisotopic_mass": 134179.0 }, "refseq": { "ac": "XP_020938807", "name": "PR domain-containing protein 11 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938807" }, "gene_names": [ { "name": "PRDM11", "type": "recommended", "evidence": [ { "id": "F1SHJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3" } ] }, { "name": "PRDM11", "type": "synonym", "evidence": [ { "id": "XP_020938807", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938807" } ] } ], "protein_names": [ { "name": "PR domain-containing protein 11", "type": "recommended", "evidence": [ { "id": "F1SHJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3/entry#names_and_taxonomy" } ] }, { "name": "PR domain-containing protein 11 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020938807", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938807" } ] } ], "function": [ { "annotation": "May be involved in transcription regulation.", "evidence": [ { "database": "UniProtKB", "id": "A0A287AZF7", "url": "https://www.uniprot.org/uniprotkb/A0A287AZF7#function" }, { "database": "UniProtKB", "id": "ARBA00055438", "url": "https://www.uniprot.org/uniprotkb/ARBA00055438#function" }, { "database": "UniProtKB", "id": "A0A480JIC8", "url": "https://www.uniprot.org/uniprotkb/A0A480JIC8#function" }, { "database": "UniProtKB", "id": "F1SHJ3", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SHJ3", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PRDM11", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3", "locus": { "chromosome": "2", "start_pos": 17177964, "end_pos": 17263880, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013276", "url": "https://www.ensembl.org/id/ENSSSCG00000013276" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013276", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013276", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19195", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19195", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520417", "url": "https://www.ncbi.nlm.nih.gov/gene/100520417", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001005", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001005", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001214", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028002", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028002", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044405", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044405", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046341", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046341", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050331", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050331", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057456", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057456", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16515:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16515:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23098", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23098", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23098:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23098:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46880", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46880", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46880:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46880:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13873", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13873", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21549", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21549", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25431", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25431", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020938807", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938807", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AZF7", "url": "https://www.uniprot.org/uniprotkb/A0A287AZF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZF7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZF7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480JIC8", "url": "https://www.uniprot.org/uniprotkb/A0A480JIC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480JIC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A480JIC8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHJ3", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHJ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTENMKECLAQTKAAVGEMVTVVKTEVCSPLRDQEYGQPCSRRPDPSAMEVEPKKLKGKRDLIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKEASGENDVRCLNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQALDNPEDLRGPLPLPVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQDDGYSQCAMTVSHGVQNVSRTQGEGDWKIPQGAPKEAGPLEDEEEEPSSFKADSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGTLPEPPTLPAQVLELPEFSDPAASESLVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLALEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSIILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFSGLGIRLQDEKPTVGLGIDGANVTASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPCLEELENNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAVRWIIGEQNVLNALIKDYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYVFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAMKNLRVAEAKFQSIREKICQKTQVILAQRFDSRSRIFVKACQVFDLTAWPRNSEELMSYGKEDMVQIFDHLEAIPTFSRDVCREGLDPRGSLLMEWRELKADYYTKNGFKDLIGHICKYKQRFPLLNKIIQVLKVLPTSTACCEKGRNALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEKSGNSYTLSAEVLSRMSALEQKPVLQTVDHGSEFYPDI", "length": 1177, "header": "tr|F1SHJ3-1|F1SHJ3_PIG Isoform 1 of PR domain-containing protein 11 OS=Sus scrofa OX=9823 GN=PRDM11 PE=4 SV=4 CANONICAL=F1SHJ3-1" }, "isoforms": [ { "isoform_ac": "A0A287AZF7-1", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3/entry#A0A287AZF7-1", "sequence": { "sequence": "MTENMKECLAQTKAAVGEMVTVVKTEVCSPLRDQEYGQPCSRRPDPSAMEVEPKKLKGKRDLIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKEASGENDVRCLNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQALDNPEDLRGPLPLPVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQDDGYSQCAMTVSHGVQNVSRTQGEGDWKIPQGAPKEAGPLEDEEEEPSSFKADSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGTLPEPPTLPAQVLELPEFSDPAGKLVWMRRLSEGRARGGQCRGGAWCSRWGHLWGHLGPVPGRRAPATASGGLRWSALQRRWGLCDSLLYPPPQ", "length": 528, "header": "tr|A0A287AZF7-1|A0A287AZF7_PIG Computationally mapped isoform of PR domain-containing protein 11 OS=Sus scrofa OX=9823 GN=PRDM11 PE=4 SV=2 CANONICAL=F1SHJ3-1" }, "locus": { "chromosome": "2", "start_pos": 17227415, "end_pos": 17181923, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065779.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065779.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049350.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049350.2" } ] } }, { "isoform_ac": "A0A480JIC8-1", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3/entry#A0A480JIC8-1", "sequence": { "sequence": "MTENMKECLAQTKAAVGEMVTVVKTEVCSPLRDQEYGQPCSRRPDPSAMEVEPKKLKGKRDLIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKEASGENDVRCLNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRNVAPLAERKRKPKFSKEELDILVTEVTHHEAVLFGRETMRLSHADRDKIWEGIARKITSVSQVPRSVKDIKHRWDDMKRRTKDKLAFMQQSLSGPGSGGRAPTIVLTAHERAIESALLTARAGHCFPRAELDATDSPSTSYDEDEETPGPSRQPLRVPLQPSPEEEACLARPTLLRSSSSSDQSETVGPKPEALPRPSPPAQTACRTPRPHPSPPSAGLDWQLLHAHAQQTEVFRQFCQELVTVHRDMANSMHVIGQAMAELTSRVSQMCQTLTEIRDGVQASQRGPEGAAPTGSTPQAEAPPAEPPEAPPAPAPTRTTRSRKRKHNF", "length": 513, "header": "tr|A0A480JIC8-1|A0A480JIC8_PIG Computationally mapped isoform of PR domain-containing protein 11 OS=Sus scrofa OX=9823 GN=PRDM11 PE=4 SV=1 CANONICAL=F1SHJ3-1" }, "locus": { "chromosome": "2", "start_pos": 17227415, "end_pos": 17194032, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077346.1", "url": "https://www.ensembl.org/id/ENSSSCT00000077346.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073580.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073580.1" } ] } }, { "isoform_ac": "F1SHJ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SHJ3/entry#F1SHJ3-1", "sequence": { "sequence": "MTENMKECLAQTKAAVGEMVTVVKTEVCSPLRDQEYGQPCSRRPDPSAMEVEPKKLKGKRDLIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVVKEASGENDVRCLNEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSIDGSDETKANWMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQALDNPEDLRGPLPLPVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQDDGYSQCAMTVSHGVQNVSRTQGEGDWKIPQGAPKEAGPLEDEEEEPSSFKADSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGTLPEPPTLPAQVLELPEFSDPAASESLVSGPAIMEDDDQEVDSADESVSNDMMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLALEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSIILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFSGLGIRLQDEKPTVGLGIDGANVTASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPCLEELENNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAVRWIIGEQNVLNALIKDYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYVFQGEYLLVSQVDDKIEEAIQEISRLADSPGEYLQEFEENFRESFNGIAMKNLRVAEAKFQSIREKICQKTQVILAQRFDSRSRIFVKACQVFDLTAWPRNSEELMSYGKEDMVQIFDHLEAIPTFSRDVCREGLDPRGSLLMEWRELKADYYTKNGFKDLIGHICKYKQRFPLLNKIIQVLKVLPTSTACCEKGRNALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEKSGNSYTLSAEVLSRMSALEQKPVLQTVDHGSEFYPDI", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48051:SF62", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23598", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23598", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231740", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231740", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SI25", "url": "https://www.uniprot.org/uniprotkb/F1SI25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI25-1", "url": "https://www.uniprot.org/uniprotkb/F1SI25-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNSALRAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSSNKIESLPPMIIGKFTLLKSLSLNNNRLTVLPDELCHLKKLETLSLNNNHLRELPSTFGQLSALKTLSISGNQLRALPPQLCSLRHLDVVDLSKNQIRSIPDIVGELQVIELNLNQNQISQISVKISCCPRLKVLRLEENCLELSMLPQSILSDSQICLLAVEGNLFEIKKLRELEGYDKYMERFTATKKKFA", "length": 239, "header": "tr|F1SI25-1|F1SI25_PIG Isoform 1 of Leucine-rich repeat-containing protein 57 OS=Sus scrofa OX=9823 GN=LRRC57 PE=1 SV=1 CANONICAL=F1SI25-1" }, "isoforms": [ { "isoform_ac": "F1SI25-1", "url": "https://www.uniprot.org/uniprotkb/F1SI25/entry#F1SI25-1", "sequence": { "sequence": "MGNSALRAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSSNKIESLPPMIIGKFTLLKSLSLNNNRLTVLPDELCHLKKLETLSLNNNHLRELPSTFGQLSALKTLSISGNQLRALPPQLCSLRHLDVVDLSKNQIRSIPDIVGELQVIELNLNQNQISQISVKISCCPRLKVLRLEENCLELSMLPQSILSDSQICLLAVEGNLFEIKKLRELEGYDKYMERFTATKKKFA", "length": 239, "header": "tr|F1SI25-1|F1SI25_PIG Isoform 1 of Leucine-rich repeat-containing protein 57 OS=Sus scrofa OX=9823 GN=LRRC57 PE=1 SV=1 CANONICAL=F1SI25-1" }, "locus": { "chromosome": "1", "start_pos": 128845024, "end_pos": 128839433, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005219.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005219.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005093.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005093.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SI25", "url": "https://www.uniprot.org/uniprotkb/F1SI25" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513451", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513451", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1L1RZ25-1", "protein_name": "Leucine-rich repeat-containing protein 57", "gene_name": "LRRC57", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGNSALKAHLETAQKTGVFQLTGKGLTEFPEELQKLTSNLRTIDLSNNKIELLPPLIGKFSFLKSLVLNNNKLTVLPEELCRLKKLETLHLNGNHLRQLPAAFGQLSALKTLNLSGNQLRTVPTQLCGLRHLDVVDLSKNQIQNVPDSVGELQAIELNLNQNQISQISVQISHCPRLKVLRLEENCLELSMLPQSILSDSQISLLAVEGNLFEIKKLRELEGYDKYMERFTATKKKFA", "length": 238 }, "evidence": [ { "id": "F1SI25", "url": "https://omabrowser.org/oma/group/F1SI25/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7G775-1", "protein_name": "Leucine-rich repeat-containing protein 57", "gene_name": "Lrrc57", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MMSQGVPARAEALGERLRRARVPGVPWRSLLCAERELSRSARMGNSALRAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSNNKIDSLPPQLIGKFTLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNNLLRELPSTFGQLSALKTLSLSGNQLGALPPQLCSLRHLDVVDLSKNQIRSILDTVGELQAIELNLNQNQISQISVKISCCPRLKVLRLEENCLELSMLPQSILNDSQICLLAVEGNLFEIKKLRELEGYDKYMERFTATKKKFA", "length": 281 }, "evidence": [ { "id": "F1SI25", "url": "https://omabrowser.org/oma/group/F1SI25/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5FVI3-1", "protein_name": "Leucine-rich repeat-containing protein 57", "gene_name": "Lrrc57", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGNSALRAHVETAQKTGVFQLKDRGLTEFPSELQKLTSNLRTIDLSNNKIDSLPPLIIGKFTLLKSLSLNNNKLTVLPDELCNLKKLETLSLNNNHLRELPSSFGQLSALKTLSLSGNQLGALPPQLCSLRHLDVVDLSKNQIRSIPDTVGELQAIELNLNQNQISQISVRISCCPRLKVLRLEENCLELSMLPQSILSDSQICLLAVEGNLFEIKKLRELEGYDKYMERFTATKKKFA", "length": 239 }, "evidence": [ { "id": 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"glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SI25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI25" }, { "id": "PF23598", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23598" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Disease resistance R13L4/SHOC-2-like LRR", "eco_id": "ECO_0000259", "start_pos": 58, "end_pos": 153, "start_aa": "Ile", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], 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"https://bgee.org/?page=gene&gene_id=ENSSSCG00000004716", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07401", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07401", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624103", "url": "https://www.ncbi.nlm.nih.gov/gene/100624103", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004843", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004843", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041871", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041871", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056229", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056229", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056230", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056230", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624103", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624103", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VEWQTYH", "url": "https://omabrowser.org/oma/group/VEWQTYH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SI46", "url": "https://www.orthodb.org/?gene=F1SI46", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14795", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14795", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14795:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14795:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00149", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00149", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24384", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24384", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24394", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24394", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020952710", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952710", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKL6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKL6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKL6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI46", "url": "https://www.uniprot.org/uniprotkb/F1SI46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI46-1", "url": "https://www.uniprot.org/uniprotkb/F1SI46-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCM5", "url": "https://www.uniprot.org/uniprotkb/I3LCM5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LCM5-1", "url": "https://www.uniprot.org/uniprotkb/I3LCM5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAATLAIRVVAGLAAAVVAAMLLEHYGLAGPPSSLPQPRTPRSPHPAPGAGASNIFWGLQISDIHLSRFHDPGRAIDLEKFCSETIDIIQPALVLATGDLTDAKTKEQLGSRQQEIEWQTYHGILRKTRVMEKTKWLDIKGNHDAFNIPSLESVENYYRKYSAIRRDGSFHYVHSTPFGNYSFISLDATLNPGPKRPFNFFGILDQKQMEDLLLLAKESSWSNHSIWFGHFTTSTILSPSPGIRSVMSSATAYLCGHLHTLGGLMPVLHTRHFQGTLELEVGDWKDNRRYRIFAFDHDLFSFADLIFGEWPVVLITNPKALLYSSAKHEPLERLLYSTHIRVLAFSLSSITSVTVKIDGVHLGQASHLSGPIFILKWNPRNYGNKTHNIEVIVQDSAGRSKSVHHVFSAQKDIHLRFDPLASFILLTDHCIVARVVFVMIVLIQLIILITFRFRAHPEHKGPPGFVNLTSFSLHVLSKINIFYYSVLLLTLYTVLGPWFVGEITKGKLGCCFSFGIFVDGHFLPGSLTFIFGILQLVFFNIPLMAYLCWSLLQRCFGHNFRSHLRQGKYLKIIPVHLLMLLLYIWQIYSCYFLHMTYGTLALLFSPLRTWLTLVTPVLIRCVWTLNSTELGTFIVQLKSHLSS", "length": 643, "header": "tr|F1SI46-1|F1SI46_PIG Isoform 1 of Transmembrane protein 62 OS=Sus scrofa OX=9823 GN=TMEM62 PE=1 SV=3 CANONICAL=F1SI46-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKL6-1", "url": "https://www.uniprot.org/uniprotkb/F1SI46/entry#A0A286ZKL6-1", "sequence": { "sequence": "MAATLAIRVVAGLAAAVVAAMLLEHYGLAGPPSSLPQPRTPRSPHPAPGAGASNIFWGLQISDIHLSRFHDPGRAIDLEKFCSETIDIIQPALVLATGDLTDAKTKEQLGSRQQEIEWQTYHGILRKTRVMEKTKWLDIKGNHDAFNIPSLESVENYYRKYSAIRRDGSFHYVHSTPFGNYSFISLDATLNPGPKRPFNFFGILDQKQMEDLLLLAKESSWSNHSIWFGHFTTSTILSPSPGIRSVMSSATAYLCGHLHTLGGLMPVLHTRHFQGTLELEVGDWKDNRRYRIFAFDHDLFSFADLIFGEWPVVLITNPKALLYSSAKHEPLERLLYSTHIRVLAFSLSSITSVTVKIDGVHLGQASHLSGPIFILKWNPRNYGNKTHNIEVIVQARVVFVMIVLIQLIILITFRFRAHPEHKGPPGFVNLTSFSLHVLSKINIFYYSVLLLTLYTVLGPWFVGEITKGKLGCCFSFGIFVDGHFLPGSLTFIFGILQLVFFNIPLMAYLCWSLLQRCFGHNFRSHLRQGKYLKIIPVHLLMLLLYIWQIYSCYFLHMTYGTLALLFSPLRTWLTLVTPVLIRCVWTLNSTELGTFIVQLKSHLSS", "length": 605, "header": "tr|A0A286ZKL6-1|A0A286ZKL6_PIG Computationally mapped isoform of Transmembrane protein 62 OS=Sus scrofa OX=9823 GN=TMEM62 PE=4 SV=1 CANONICAL=F1SI46-1" }, "locus": { "chromosome": "1", "start_pos": 128305799, "end_pos": 128270113, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061188.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061188.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032103.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032103.1" } ] } }, { "isoform_ac": "F1SI46-1", "url": "https://www.uniprot.org/uniprotkb/F1SI46/entry#F1SI46-1", "sequence": { "sequence": "MAATLAIRVVAGLAAAVVAAMLLEHYGLAGPPSSLPQPRTPRSPHPAPGAGASNIFWGLQISDIHLSRFHDPGRAIDLEKFCSETIDIIQPALVLATGDLTDAKTKEQLGSRQQEIEWQTYHGILRKTRVMEKTKWLDIKGNHDAFNIPSLESVENYYRKYSAIRRDGSFHYVHSTPFGNYSFISLDATLNPGPKRPFNFFGILDQKQMEDLLLLAKESSWSNHSIWFGHFTTSTILSPSPGIRSVMSSATAYLCGHLHTLGGLMPVLHTRHFQGTLELEVGDWKDNRRYRIFAFDHDLFSFADLIFGEWPVVLITNPKALLYSSAKHEPLERLLYSTHIRVLAFSLSSITSVTVKIDGVHLGQASHLSGPIFILKWNPRNYGNKTHNIEVIVQDSAGRSKSVHHVFSAQKDIHLRFDPLASFILLTDHCIVARVVFVMIVLIQLIILITFRFRAHPEHKGPPGFVNLTSFSLHVLSKINIFYYSVLLLTLYTVLGPWFVGEITKGKLGCCFSFGIFVDGHFLPGSLTFIFGILQLVFFNIPLMAYLCWSLLQRCFGHNFRSHLRQGKYLKIIPVHLLMLLLYIWQIYSCYFLHMTYGTLALLFSPLRTWLTLVTPVLIRCVWTLNSTELGTFIVQLKSHLSS", "length": 643, "header": "tr|F1SI46-1|F1SI46_PIG Isoform 1 of Transmembrane protein 62 OS=Sus scrofa OX=9823 GN=TMEM62 PE=1 SV=3 CANONICAL=F1SI46-1" }, "locus": { "chromosome": "1", "start_pos": 128305799, "end_pos": 128270113, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005208.3", "url": "https://www.ensembl.org/id/ENSSSCT00000005208.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005082.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005082.3" } ] } }, { "isoform_ac": "I3LCM5-1", "url": "https://www.uniprot.org/uniprotkb/F1SI46/entry#I3LCM5-1", "sequence": { "sequence": "MAATLAIRVVAGLAAAVVAAMLLEHYGLAGPPSSLPQPRTPRSPHPAPGAGASNIFWGLQISDIHLSRFHDPGRAIDLEKFCSETIDIIQPALVLATGDLTDAKTKEQLGSRQQEIEWQTYHGILRKTRVMEKTKWLDIKGNHDAFNIPSLESVENYYRKYSAIRRDGSFHYVHSTPFGNYSFISLDATLNPGPKRPFNFFGILDQKQMEDLLLLAKESSWSNHSIWFGHFTTSTILSPSPGIRSVMSSATAYLCGHLHTLGGLMPVLHTRHFQGTLELEVGDWKDNRRYRIFAFDHDLFSFADLIFGEWPVVLITNPKALLYSSAKHEPLERLLYSTHIRVLAFSLSSITSVTVKIDGVHLGQASHLSGPIFILKWNPRNYGNKTHNIEVIVQDSAGRSKSVHHVFSAQKDIHLRFDPLASFILLTDHCIVARVVFVMIVLIQLIILITFRFRAHPEHKGPWFVGEITKGKLGCCFSFGIFVDGHFLPGSLTFIFGILQLVFFNIPLMAYLCWSLLQRCFGHNFRSHLRQGKYLKIIPVHLLMLLLYIWQIYSCYFLHMTYGTLALLFSPLRTWLTLVTPVLIRCVWTLNSTELGTFIVQLKSHLSS", "length": 608, "header": "tr|I3LCM5-1|I3LCM5_PIG Computationally mapped isoform of Transmembrane protein 62 OS=Sus scrofa OX=9823 GN=TMEM62 PE=1 SV=2 CANONICAL=F1SI46-1" }, "locus": { "chromosome": "1", "start_pos": 128305799, "end_pos": 128270113, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023322.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023322.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021800.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021800.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SI46", "url": "https://www.uniprot.org/uniprotkb/F1SI46" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624103", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624103", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6A4E5-1", "protein_name": "Transmembrane protein 62", "gene_name": "Tmem62", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVLRSHHGQGCQTLEKPGGVLPPCHPLALLFLVLTTLSNAGEPGCRGAEAWAEARCGGGRRPQRPEVRAGALRCCAAMARMLAVRVAAGLAAAALAALLLEHYGLAGPSTPLPKPRGSQRPHPAPGSDANNIFWGLQISDIHLSRFQDPGRALALEKFCSETIDIIQPALVLATGDLTDAKTKEHLGSRQHEVEWQTYQRILKKTRVMEKTKWLDIKGNHDVYNIPSLESITNYYRKYSAVRKDGSFHYIHSTPFGNYSFISVDATQRPGPKRPYNFFGILNEKQMEELLSFSKKSSQSNQTIWFGHFTTSTILSPSPGIRTVMGSATAYLCGHLHTLGGLMPVLHTRHFTGTLELEVGDWKDNRRYRIFAFDHDLFSFADVTFDKWPVALITNPKSLLYSCAKHEPLERLFYSTHIRVLAFSLSPITSVTVKIDGGDIGQASHLSGPIFILKWNPRNYSNGTHTIEVFVQDSAGRSTSARHIFSAQENTHLTFDPLASFILLTDHYIVARVLFVLIVLIQLTVLITFRYLAYPELREPLGFANMTTFSLHILSKINISYYSVLLLTLYTVLGPWFVGEIIDGKWGCCFSFGIVVDGHFLQGGLTFISGIIQLVFFNIPLTAYTCWSLLQRCFGHNFRSHLLQGRYVQIIPVHLLMLLLYTWQVYSCYFLHVTYGSLAFLLSPLRTWLTLLTPVLVYRVWTLNSTELGIFMVQLKSHLSS", "length": 720 }, "evidence": [ { "id": "F1SI46", "url": "https://omabrowser.org/oma/group/F1SI46/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZFX4-1", "protein_name": "Transmembrane protein 62", "gene_name": "TMEM62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLKLAAGLLLAAAVALLLDWYAPAASSAPAGLRRQRAPRPAPGAEAANLLWAVQVSDIHISRFQDPTRASDLEKFCSETINIIQPAFVLATGDLTDAKTSDKLGSEQVEEEWRIYQSVLKRSRVKEKTKWIDIKGNHDSFNIPRLDSVQNYYRKYSAWRKDGSFHYVHTTSFGSYSFICVDATLSPGPKRPYNFFGILNTRQMQELSVMATESLRSNHTVWFGHYPTSTIISPAPGIRALMSSATAYLCGHLHTMGGLMPALYSQHRSGTLELELGDWKDNRKYRILAFDHDLLSFVDLTFEEWPAVLITNPKSSLYSSSFHEPLVKILYSTHIRILVFSPAAITSVTVYIDGVRLGNAHQASGPLYVLKWSPQNYSEGTHQIDVTVQDASGRTITQGHIFSMEENHPLRFGFWPSVILLTDHYVLARTLFGLIVLIQIALLVVFRYLQKPALKEKPGLLGLTSFSLHVFSKINAFYYSVLVLNLYTVLGPWFVGELIDGQVGACFSFGVFVGGSFFRGGLTYVVGILQMLFFNVPLMAYLCWCLFLRCEGHSFCSHIHYVRRPLVVLIHLAMTLLLAWQVYSCYFLQRTYGTLAFVFSPMRTWLVALTSFLIYKTWTFQSSELRTYIVEMKNCQSF", "length": 637 }, "evidence": [ { "id": "F1SI46", "url": "https://omabrowser.org/oma/group/F1SI46/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BLF4-1", "protein_name": "Transmembrane protein 62", "gene_name": "TMEM62", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASGLAVRVVAGLAAAALAAVFLEHYGLAGRSSSLPQPRTPRSPHPAPGSGASNIFWGLQISDIHLSRFHDPGRAVDLEKFCSETVDIIQPALVLATGDLTDAKTKDNLGSMQQEVEWQTYHSILKKTKVMEKTKWLDIKGNHDAFNIPSLESVENYYRKYSAVRRDGSFRYVHSTPFGNYSFISLDASLNPGPKRPFNFFGILNQKQMEELLLLAKESSWSNHSIWFGHYTTSTILSPSPGLRSIMSSATAYLCGHLHTLGGLMPVLHTRHFQGPLELELGDWKDNRRYRIFAFDHDLFSFADLIFGEWPVVLITNPKSLLYSSAKHEPLERLLHSTHIRVLAFSLSSITSVAVKIDGVPLGQASHLSGPIFILKWNPRNYSNKTHNIEVIVQDSAGRSKSVQHIFSAREDIQLRFDPLASFILLTDHCTVARVIFVMIVLIQLIILIIFRYQAYPEHKGPPGFINLTSFSLHVLSKLNISYYSVLLLTLYTVLGPWFVGEITKGKLGCCFSFGIFVDGHFLQGSLTFIVGILQLVFFNIPLMVYVCWILLQRCFGHSFRSHLRQGKYLKIIPVHLLMLLLYIWHIYSCYFLHVTYGTLALLFSPLRTWLTLVTPVLIRCVWTLNAAELGTFIVQLKSHLSS", "length": 643 }, "evidence": [ { "id": "F1SI46", "url": "https://omabrowser.org/oma/group/F1SI46/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7FFQ5-1", "protein_name": "Transmembrane protein 62 isoform X1", "gene_name": "tmem62", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRLFAALVVLGLLLACFTSWLFDSYDGAWHPKRSLFPQSGRSGGPPHPGGQRDNIFWFVQVSDIHISRFHDPRRIPDFEKFCTDTIDVIKPDLVLATGDLTDAKTESKMGSLQHEVEWQAYHNVLKRSRVLERTKWIDIRGNHDAFNIVSLESVNNYYRKYSANQKVGSFHYVHRTPFGNYSFICADATLVPGPKRPYNFFGIIDESQMDMLETFREESLSSNKSIWFGHYTTSTVISPSPGIRELMSTAVAYLCGHLHTLGGFMPALHSRHQGGTLELELGDWMDNRRYRILAFDHDLFSFSDLTFEDWPAMLITNPKDAQYLQPGVEPLGRIRSSTHIRVLAFSESPITAVYVSVDGVTLGKAVSAGGPLYVLLWDPMHYATGLHTIKVKVEDSAGRSKVREQQFTLEEELTPSFGFVQSFILLTDHYILARIAFVVIVLLNLGGLVLFRFMPVSSTRGLSSQAWMSLHLVSKSNVFFYTLLLFNLCTALGPWFIGEVIDGHIGVCFAFGVFVDGHFLEGSLTYVVGFIQVLFFNMPLTYYLCWSLHHRCRGTNFRSHFCRPGCRWRTLAVHLGMLVLMIWQAYSCYFLLETYGSLAFFMSPVRTWALLMGLLLVYRAWWGKPLRFSDGSKTNRPL", "length": 639 }, "evidence": [ { "id": "F1SI46", "url": "https://omabrowser.org/oma/group/F1SI46/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q0P6H9-1", "protein_name": "Transmembrane protein 62", "gene_name": "TMEM62", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAVLALRVVAGLAAAALVAMLLEHYGLAGQPSPLPRPAPPRRPHPAPGPGDSNIFWGLQISDIHLSRFRDPGRAVDLEKFCSETIDIIQPALVLATGDLTDAKTKEQLGSRQHEVEWQTYQGILKKTRVMEKTKWLDIKGNHDAFNIPSLDSIKNYYRKYSAVRRDGSFHYVHSTPFGNYSFICVDATVNPGPKRPYNFFGILDKKKMEELLLLAKESSRSNHTIWFGHFTTSTILSPSPGIRSIMSSAIAYLCGHLHTLGGLMPVLHTRHFQGTLELEVGDWKDNRRYRIFAFDHDLFSFADLIFGKWPVVLITNPKSLLYSCGEHEPLERLLHSTHIRVLAFSLSSITSVTVKIDGVHLGQAVHVSGPIFVLKWNPRNYSSGTHNIEVIVQDSAGRSKSVHHIFSVQENNHLSFDPLASFILRTDHYIMARVLFVLIVLSQLTILIIFRYRGYPELKEPSGFINLTSFSLHVLSKINIFYYSVLLLTLYTVLGPWFFGEIIDGKFGCCFSFGIFVNGHFLQGSITFIIGILQLAFFNIPLMAYMCWSLLQRCFGHNFRSHLHQRKYLKIMPVHLLMLLLYIWQVYSCYFLYATYGTLAFLFSPLRTWLTLLTPVLIRYVWTLNSTKFGIFMVQLKSHLSS", "length": 643 }, "evidence": [ { "id": "F1SI46", "url": "https://omabrowser.org/oma/group/F1SI46/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BXJ9-1", "protein_name": "Transmembrane protein 62", "gene_name": "Tmem62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MARMLAVRVVAGLAAAAVAALLLEHYGLAGPTTPLPKPRGSQRPHPAPGSEANNIFWGLQISDIHLSRFQDPGRALALEKFCSETIDIIQPALVLATGDLTDAKTKEHLGSRQHEVEWQTYQRILKKTRVMEKTKWLDIKGNHDAYNIPSLESIANYYRKYSAVRKDGAFHHIHSTPFGNYSFISVDATQRPGPKRPYNFFGILDEKQMEELVEFSKKSSQSNQTIWFGHFTTSTIMSPSPGIRTVMGSATAYLCGHLHTLGGLMPVLHTRHFTGTLELEVGDWKDNRRYRIFAFDHDLFSFADVTFDKWPVVLITNPKSLLYSCAKHEPLERLFHSTHIRVLAFSLSPITSVTVKIDGGDIGQASHLSGPIFILKWNPRNYSNGTHTIEVFVQDSAGRSRTAHHIFSAQEDAHLTFDPLASFILLTDHYIVARVLFVLIVLIQLTTLITFRYLAYPELKEPLGFANMTTFSLHILSKINISYYSVLLLTLYTVLGPWFVGEIIDGKLGCCFSFGIFVDGHFLQGGLTFINGIIQLVFFNIPLMAYVCWSLLHRCFGHSFRSHLHQGKYWKIIPVYLLILLLYIWQVYSCYFLHVTYGSLAFTFSPLRTWLTLLTPVLIYRVWTLNSTELGIFMVQLKSHLSS", "length": 643 }, "evidence": [ { "id": "F1SI46", "url": "https://omabrowser.org/oma/group/F1SI46/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F1SI46", "url": "https://www.uniprot.org/uniprotkb/F1SI46" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 384, "end_pos": 386, "annotation": "n_glycosylation_sequon" }, { "start_pos": 467, "end_pos": 469, "annotation": "n_glycosylation_sequon" }, { "start_pos": 626, "end_pos": 628, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SI46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI46" }, { "id": "PF00149", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00149" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Calcineurin-like phosphoesterase", "eco_id": "ECO_0000259", "start_pos": 59, "end_pos": 260, "start_aa": "Leu", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SI46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI46" }, { "id": "PF24394", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24394" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TMEM62 C-terminal", "eco_id": "ECO_0000259", "start_pos": 435, "end_pos": 597, "start_aa": "Val", "end_aa": "Tyr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SI46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI46" }, { "id": "PF24384", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24384" } ], "ann_type": "Domain_Extent_Annotation", 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SI59-1", "uniprot_ac": "F1SI59", "uniprot_id": "F1SI59_PIG", "mass": { "chemical_mass": 40008.0, "monoisotopic_mass": 40008.0 }, "refseq": { "ac": "XP_005659746", "name": "adenosine deaminase-like protein isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659746" }, "gene_names": [ { "name": "MAPDA", "type": "recommended", "evidence": [ { "id": "F1SI59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ] }, { "name": "ADAL", "type": "synonym", "evidence": [ { "id": "XP_005659746", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659746" } ] } ], "protein_names": [ { "name": "N6-Methyl-AMP deaminase", "type": "recommended", "evidence": [ { "id": "F1SI59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI59/entry#names_and_taxonomy" } ] }, { "name": "Adenosine deaminase-like protein", "type": "synonym", "evidence": [ { "id": "F1SI59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI59/entry#names_and_taxonomy" } ] }, { "name": "N6,N6-dimethyl-AMP deaminase", "type": "synonym", "evidence": [ { "id": "F1SI59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI59/entry#names_and_taxonomy" } ] }, { "name": "N6-isopentenyl-AMP deaminase", "type": "synonym", "evidence": [ { "id": "F1SI59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI59/entry#names_and_taxonomy" } ] }, { "name": "adenosine deaminase-like protein isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005659746", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659746" } ] } ], "function": [ { "annotation": "Deaminase involved in the detoxification of modified adenosines containing N(6)-methylated adenine (m6A) post-transcriptional modification. Modified nucleosides are derived from the degradation of RNAs (mRNAs, rRNAs and tRNAs) and possess intrinsic cytotoxicity and must be cleared to prevent metabolic dysfunction. Acts downstream of ADK and catalyzes the hydrolysis of the free cytosolic methylated adenosine nucleotides N(6)-methyl-AMP (m6AMP), N(6),N(6)-dimethyl-AMP (m6,6AMP) and N(6)-isopentenyl-AMP (i6AMP) to produce inositol monophosphate (IMP). Catalyzes the removal of different alkyl groups not only from N6-substituted purine or 2-aminopurine nucleoside monophosphates but also from O6-substituted compounds in vitro.", "evidence": [ { "database": "UniProtKB", "id": "A0A481B7B0", "url": "https://www.uniprot.org/uniprotkb/A0A481B7B0#function" }, { "database": "UniProtKB", "id": "ARBA00094463", "url": "https://www.uniprot.org/uniprotkb/ARBA00094463#function" }, { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MAPDA", "url": "https://www.uniprot.org/uniprotkb/F1SI59", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000004710", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004710", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00443", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00443", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100155388", "url": "https://www.ncbi.nlm.nih.gov/gene/100155388", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006330", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006330", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032466", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032466", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100155388", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155388", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RPQFKPY", "url": "https://omabrowser.org/oma/group/RPQFKPY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZVJ6", "url": "https://www.orthodb.org/?gene=A0A286ZVJ6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SI59", "url": "https://www.orthodb.org/?gene=F1SI59", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11409", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11409", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11409:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11409:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00962", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00962", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2161541", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2161541", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-74217", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-74217", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005659746", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659746", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "16001", "url": "https://www.rhea-db.org/rhea/16001", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "86223", "url": "https://www.rhea-db.org/rhea/86223", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "86227", "url": "https://www.rhea-db.org/rhea/86227", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZVJ6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVJ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVJ6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVJ6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A481B7B0", "url": "https://www.uniprot.org/uniprotkb/A0A481B7B0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A481B7B0-1", "url": "https://www.uniprot.org/uniprotkb/A0A481B7B0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI59-1", "url": "https://www.uniprot.org/uniprotkb/F1SI59-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMEAEEQQSWKTTFYSKLPKVELHAHLNGSISSNTIKKLITKKPGLKIHDQMTMIDKGKKRTLEECFQMFPIIHQLTTSPEDILMVTKDVIKEFADDGVKYLELRSTPRGENATGMTKKTYVESVLEGIKQSKQENVDIDVRYLISIDRRGGPSAAKENVKLAEEFFLSTEGIVLGLDLSGDPTAGQAKDFLEPLLEAKKSGLKLALHLSEIPNQEKETQVLLDLLPDRIGHGTFLSCSDGGSPDLVDFVRQHQIPLELCLTSNIKSQTVPSYDQHHFGFWYSLVHPAVICTDDKGVFATHLSQEYQLAAETFNLTQSQVWDLSYESISYIFASDSTKSALRKKWNQMKPKALHF", "length": 355, "header": "tr|F1SI59-1|F1SI59_PIG Isoform 1 of N6-Methyl-AMP deaminase OS=Sus scrofa OX=9823 GN=MAPDA PE=1 SV=2 CANONICAL=F1SI59-1" }, "isoforms": [ { "isoform_ac": "A0A286ZVJ6-1", "url": "https://www.uniprot.org/uniprotkb/F1SI59/entry#A0A286ZVJ6-1", "sequence": { "sequence": "MMEAEEQQSWKTTFYSKLPKVELHAHLNGSISSNTIKKLITKKPGLKIHDQMTMIDKGKKRTLEECFQMFPIIHQLTTSPEDILMVTKDVIKEFADDGVKYLELRSTPRGENATGMTKKTYVESVLEGIKQSKQENVDIDVRYLISIDRRGGPSAAKENVKLAEEFFLSTEGIVLGLDLSGDPTIPNQEKETQVLLDLLPDRIGHGTFLSCSDGGSPDLVDFVRQHQIPLELCLTSNIKSQTVPSYDQHHFGFWYSLVHPAVICTDDKGVFATHLSQEYQLAAETFNLTQSQVWDLSYESISYIFASDSTKSALRKKWNQMKPKALHF", "length": 328, "header": "tr|A0A286ZVJ6-1|A0A286ZVJ6_PIG Computationally mapped isoform of N6,N6-dimethyl-AMP deaminase OS=Sus scrofa OX=9823 GN=MAPDA PE=3 SV=1 CANONICAL=F1SI59-1" }, "locus": { "chromosome": "1", "start_pos": 128120597, "end_pos": 128098585, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049753.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049753.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035514.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035514.1" } ] } }, { "isoform_ac": "A0A481B7B0-1", "url": "https://www.uniprot.org/uniprotkb/F1SI59/entry#A0A481B7B0-1", "sequence": { "sequence": "MMEAEEQQSWKTTFYSKLPKVELHAHLNGSISSNTIKKLITKKPGLKIHDQMTMIDKGKKRTLEECFQMFPIIHQLTTSPEDILMVTKDVIKEFADDGVKYLELRSTPRGENATGMTKKTYVESVLEGIKQSKQENVDIDVRYLISIDRRGGPSAAKENVKLAEEFFLSTEGIVLGLDLSGDPTAGQAKDFLEPLLEAKKSGLKLALHLSEIPNQEKETQVLLDLLPDRIGHGTFLSCSDGGSPDLVDFVRQHQIPLGKASGPPGRPLSPSP", "length": 272, "header": "tr|A0A481B7B0-1|A0A481B7B0_PIG Computationally mapped isoform of N6-Methyl-AMP deaminase OS=Sus scrofa OX=9823 GN=MAPDA PE=1 SV=1 CANONICAL=F1SI59-1" }, "locus": { "chromosome": "1", "start_pos": 128120597, "end_pos": 128101680, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081611.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081611.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071379.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071379.2" } ] } }, { "isoform_ac": "F1SI59-1", "url": "https://www.uniprot.org/uniprotkb/F1SI59/entry#F1SI59-1", "sequence": { "sequence": "MMEAEEQQSWKTTFYSKLPKVELHAHLNGSISSNTIKKLITKKPGLKIHDQMTMIDKGKKRTLEECFQMFPIIHQLTTSPEDILMVTKDVIKEFADDGVKYLELRSTPRGENATGMTKKTYVESVLEGIKQSKQENVDIDVRYLISIDRRGGPSAAKENVKLAEEFFLSTEGIVLGLDLSGDPTAGQAKDFLEPLLEAKKSGLKLALHLSEIPNQEKETQVLLDLLPDRIGHGTFLSCSDGGSPDLVDFVRQHQIPLELCLTSNIKSQTVPSYDQHHFGFWYSLVHPAVICTDDKGVFATHLSQEYQLAAETFNLTQSQVWDLSYESISYIFASDSTKSALRKKWNQMKPKALHF", "length": 355, "header": "tr|F1SI59-1|F1SI59_PIG Isoform 1 of N6-Methyl-AMP deaminase OS=Sus scrofa OX=9823 GN=MAPDA PE=1 SV=2 CANONICAL=F1SI59-1" }, "locus": { "chromosome": "1", "start_pos": 128120597, "end_pos": 128098585, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005202.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005202.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005076.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005076.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155388", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155388", "resource": "KEGG Pathway" }, { "id": "R-SSC-2161541", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2161541", "resource": "Reactome", "description": "Abacavir metabolism" }, { "id": "R-SSC-74217", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-74217", "resource": "Reactome", "description": "Purine salvage" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A525-1", "protein_name": "N6,N6-dimethyl-AMP deaminase", "gene_name": "ADAL", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLWKVLCVLALCFICSFCNLFFHLKQLSLTFIFFILSCLPRSFPKKSALITCAPCSEGCVLVHLCYLWELHAHLNGCISSSTMKKLMAQKPYLQIQNGMTVIDKGKKRTLDECFQMFQIIYQITTRTEDILLITKDVIKEFADDGVKYLELRSTPREEESTGMTKRMYVETVLEGIKQCKEEGLDIDVRLLIAINRRGGPAVAKQTVKLAEEFLLSTDGVVVGLDLSGDPTAGHGQDFLEPLSEAKKAGLKLALHLSEIPNQEEETKILLGLPPDRIGHGTFLNSATTGSEELVPLVRQNHIPIELCMTSNIKTQTVPSCDKHHFGYWYNIGHPAVLCTDDKGVFATDLSQEYELVAKTFNLTRSQMWDLSYESINYIFASNVVKSKLREQWCELKPTLFV", "length": 401 }, "evidence": [ { "id": "F1SI59", "url": "https://omabrowser.org/oma/group/F1SI59/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6DHV7-1", "protein_name": "N6-Methyl-AMP deaminase", "gene_name": "MAPDA", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MIEAEEQQPCKTDFYSELPKVELHAHLNGSISSHTMKKLIAQKPDLKIHDQMTVIDKGKKRTLEECFQMFQTIHQLTSSPEDILMVTKDVIKEFADDGVKYLELRSTPRRENATGMTKKTYVESILEGIKQSKQENLDIDVRYLIAVDRRGGPLVAKETVKLAEEFFLSTEGTVLGLDLSGDPTVGQAKDFLEPLLEAKKAGLKLALHLSEIPNQKKETQILLDLLPDRIGHGTFLNSGEGGSLDLVDFVRQHRIPLELCLTSNVKSQTVPSYDQHHFGFWYSIAHPSVICTDDKGVFATHLSQEYQLAAETFNLTQSQVWDLSYESINYIFASDSTRSELRKKWNHLKPRVLHI", "length": 355 }, "evidence": [ { "id": "F1SI59", "url": "https://omabrowser.org/oma/group/F1SI59/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q80SY6-1", "protein_name": "N6-Methyl-AMP deaminase", "gene_name": "Mapda", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEAGQQWPGKTDFYLQLPKVELHAHLNGSISSSTMKKLIAKKPHLNVHGHMTMIDKGKKRTLQECFQMFQVIHQLTTSAEDILMVTKDVIKEFADDGVKYLELRSTPREENATGMTRKTYVESVLEGIKQCKQENLDIDVRYLMAIDRRGGPTIARETVELAKEFFLSTENTVLGLDLSGDPTIGQANDFLEPLLEAKKAGLKLALHLAEIPNREKENQMLLSLLPDRIGHGTFLSASEAGALDQVDFVRQHQIPLELCLTSNIKSQTVPSYDQHHFGFWYSIAHPSVICTDDKGVFATYLSQEYQLAAETFNLTPFQVWDLSYESINYIFACDNTRSELRKRWTHLKQKVLNCNEVNYF", "length": 360 }, "evidence": [ { "id": "F1SI59", "url": "https://omabrowser.org/oma/group/F1SI59/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8LPL7-1", "protein_name": "N6-mAMP deaminase", "gene_name": "MAPDA", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEWIQSLPKIELHAHLNGSIRDSTLLELARVLGEKGVIVFADVEHVIQKNDRSLVEVFKLFDLIHKLTTDHKTVTRITREVVEDFALENVVYLELRTTPKRSDSIGMSKRSYMEAVIQGLRSVSEVDIDFVTASDSQKLHNAGDGIGRKKIYVRLLLSIDRRETTESAMETVKLALEMRDVGVVGIDLSGNPLVGEWSTFLPALQYAKDNDLHITLHCGEVPNPKEIQAMLDFKPHRIGHACFFKDEDWTKLKSFRIPVEICLTSNIVTKSISSIDIHHFADLYNAKHPLILCTDDFGVFSTSLSNEYALAVRSLGLSKSETFALARAAIDATFAEDEVKQQLRFIFDSASPEHV", "length": 355 }, "evidence": [ { "id": "F1SI59", "url": "https://omabrowser.org/oma/group/F1SI59/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VHH7-1", "protein_name": "Adenosine deaminase-like protein", "gene_name": "Ada", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEQFLKGLPKVELHAHLNGSLGIKSLCDLGERLYGTSCKDFLKLCAHFSRFEKDMDACFEKFAFVHELTSTREGLRFATELAIRDFAEDNVQYVEMRTTPKANENYSRRDYLQIVIDAIKAASETYPEITVKLLPSINRAEPVDVAEETVSLAVELARAHPNLILGIDLSGNPGKGRFSDFAPILAQARDKGLKLAIHCAEIENPSEVKEMLHFGMSRCGHGTFLTPEDIGQLKQRNIAIECCLTSNVKSGTVPSLEEHHLKRIMEADAPKVICTDDSGVFDTTLTKEFLIAAETFGLTREQCIDLTLEAVHHSFASEQEQIQMADRVGNYADILVK", "length": 337 }, "evidence": [ { "id": "F1SI59", "url": "https://omabrowser.org/oma/group/F1SI59/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "adenosine deaminase activity", "id": "GO:0004000", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004000", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" }, { "name": "N6-methyl-AMP deaminase activity", "id": "GO:0062154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0062154", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" }, { "name": "deaminase activity", "id": "GO:0019239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019239", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "adenosine catabolic process", "id": "GO:0006154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006154", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" }, { "name": "nucleotide metabolic process", "id": "GO:0009117", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009117", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" }, { "name": "inosine biosynthetic process", "id": "GO:0046103", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046103", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" }, { "name": "toxic metabolite repair", "id": "GO:0110052", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0110052", "evidence": [ { "database": "UniProtKB", "id": "F1SI59", "url": "https://www.uniprot.org/uniprotkb/F1SI59" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 112, "end_pos": 114, "annotation": "n_glycosylation_sequon" }, { "start_pos": 28, "end_pos": 30, "annotation": "n_glycosylation_sequon" }, { "start_pos": 314, "end_pos": 316, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "16001", "name": "", "equation": "N(6)-methyl-AMP + H2O + H(+) = IMP + methylamine", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "16001", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/16001" } ] }, { "id": "86223", "name": "", "equation": "N(6),N(6)-dimethyl-AMP + H2O + H(+) = dimethylamine + IMP", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "86223", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/86223" } ] }, { "id": "86227", "name": "", "equation": "N(6)-(dimethylallyl)adenosine 5'-phosphate + H2O + H(+) = dimethylallylamine + IMP", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "86227", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/86227" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SI59", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI59" }, { "id": "PF00962", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00962" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Adenosine deaminase", "eco_id": "ECO_0000259", "start_pos": 19, "end_pos": 344, "start_aa": "Pro", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 112, "end_pos": 114 }, { "start_pos": 28, "end_pos": 30 }, { "start_pos": 314, "end_pos": 316 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SI68-1", "uniprot_ac": "F1SI68", "uniprot_id": "F1SI68_PIG", "mass": { "chemical_mass": 44567.0, "monoisotopic_mass": 44567.0 }, "refseq": { "ac": "XP_003133622", "name": "BTB/POZ domain-containing protein KCTD18", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133622" }, "gene_names": [ { "name": "KCTD18", "type": "recommended", "evidence": [ { "id": "F1SI68", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI68" } ] }, { "name": "KCTD18", "type": "synonym", "evidence": [ { "id": "XP_003133622", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133622" } ] } ], "protein_names": [ { "name": "BTB/POZ domain-containing protein KCTD18", "type": "synonym", "evidence": [ { "id": "XP_003133622", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133622" } ] }, { "name": "Potassium channel tetramerization domain containing 18", "type": "synonym", "evidence": [ { "id": "F1SI68", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI68/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SI68", "url": "https://www.uniprot.org/uniprotkb/F1SI68" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KCTD18", "url": "https://www.uniprot.org/uniprotkb/F1SI68", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000016091", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016091", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18372", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18372", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100523334", "url": "https://www.ncbi.nlm.nih.gov/gene/100523334", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003131", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003131", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045704", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045704", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100523334", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523334", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CKAGPKP", "url": "https://omabrowser.org/oma/group/CKAGPKP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SI68", "url": "https://www.orthodb.org/?gene=F1SI68", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14499", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14499", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14499:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14499:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02214", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02214", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19321", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19321", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003133622", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133622", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SI68", "url": "https://www.uniprot.org/uniprotkb/F1SI68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI68-1", "url": "https://www.uniprot.org/uniprotkb/F1SI68-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESHKAEEEVVDILRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGHLFKYLLDYLHGEVHIPTEEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYSTKTDGTDAIDKQLGGRIHSKSIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLLGSLHHMAPIRKRRLTAFNEEEEEGENCKTGPKPVRFLGPSTSTQIKVKNSASVRVSPARASVNTAAGGKAAQRCAPTRVPSLVGTAGAENGAGHPPPAKVLLSDKKATPPRVIKLKRTPLCATGPSPPACPAARTVGTPEPPPNAPGALDLWTENGQRQTD", "length": 404, "header": "tr|F1SI68-1|F1SI68_PIG Isoform 1 of Potassium channel tetramerization domain containing 18 OS=Sus scrofa OX=9823 GN=KCTD18 PE=4 SV=1 CANONICAL=F1SI68-1" }, "isoforms": [ { "isoform_ac": "F1SI68-1", "url": "https://www.uniprot.org/uniprotkb/F1SI68/entry#F1SI68-1", "sequence": { "sequence": "MESHKAEEEVVDILRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGHLFKYLLDYLHGEVHIPTEEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYSTKTDGTDAIDKQLGGRIHSKSIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLLGSLHHMAPIRKRRLTAFNEEEEEGENCKTGPKPVRFLGPSTSTQIKVKNSASVRVSPARASVNTAAGGKAAQRCAPTRVPSLVGTAGAENGAGHPPPAKVLLSDKKATPPRVIKLKRTPLCATGPSPPACPAARTVGTPEPPPNAPGALDLWTENGQRQTD", "length": 404, "header": "tr|F1SI68-1|F1SI68_PIG Isoform 1 of Potassium channel tetramerization domain containing 18 OS=Sus scrofa OX=9823 GN=KCTD18 PE=4 SV=1 CANONICAL=F1SI68-1" }, "locus": { "chromosome": "15", "start_pos": 104096209, "end_pos": 104072402, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017519.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017519.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017047.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017047.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SI68", "url": "https://www.uniprot.org/uniprotkb/F1SI68" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523334", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523334", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A425-1", "protein_name": "Potassium channel tetramerization domain containing 18", "gene_name": "KCTD18", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEEDKAAEEQGILRLNVRGCLYTARRQSLCRFKDSMLASMFSGRFPLKMDESGACLIDRDGSLFKYLLDYLHGEVRIPEDKQIRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNVELKKALLDFCDSYDLVCTKPTVWVLHYLSTSGASCESKIIGVYATRADGTDAINKELGTKIHSKSIYKREAGNNVQYIWSYYSEAELKKMMDAFGTWEGRGVSYWRVPQELIECWTLEERSLKGSLHHMPPVHKRRLIDFSEVEDYIPCKVGPKPIRFSGPSTSTHIKVKNSASLKVAACNTSHSAVTLKRPNSESLILHKAASKTVSTACVPEPSNSQVPHGKQSADDKASCQMTFNISVSRKPVSSRAVKLKRTPLFLVTPSQSSSVSSKTSEQDKAAAEIPTTSMVLNKKEPAMLAESIKLKSNKVDG", "length": 430 }, "evidence": [ { "id": "F1SI68", "url": "https://omabrowser.org/oma/group/F1SI68/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7FB93-1", "protein_name": "BTB/POZ domain-containing protein KCTD18", "gene_name": "Kctd18", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPKLQESKGRMADHRAEDLLDILRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACIIDRDGQLFKYILDYLHGEVQIPSDEQTRTALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLICNKPTVWVLHYLNTSGASCESRIIGVYATKADGTDAIDKQLGGRIHSKSIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLHGSLRHMTPIRKRRLLTLSEEDEGVNCKAGPKPVRFLGPSTSTQIKVKNSAAVRVSPVSAAQITSQATANRSQRGSYGKAAQCPVATGASGHAPASPQAQSAENQATQPPPAKVLLSDKKSPSNRVIKLRRTPLCVGTSLPTPSAGSQAGSPQQPSPEASITSGVRTETREDQPDG", "length": 427 }, "evidence": [ { "id": "F1SI68", "url": "https://omabrowser.org/oma/group/F1SI68/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4A827-1", "protein_name": "Potassium channel tetramerization domain containing 18", "gene_name": "Kctd18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGHEAEEMRDILRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACIIDRDGHLFKYILDYLHGEVQTPSDEQTRTALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYSTKTDGTDAIDKQLGGRIHSKSIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLHGSLRHMAPIRKRRLIAFGEEDEGVNCKTGPKPVRFLGPSTSTQIKVKNSASVRVSPANAAQISSQATANRSQRGSCGKAAQCSVATGASGHAPASPNAQSAENQATQPPPAKVLLSDKKSPPHRVIKLRRTPLCVGPSLPTPSAGSQASFPQQPSPEASNTLGVQTENRKDQPDG", "length": 417 }, "evidence": [ { "id": "F1SI68", "url": "https://omabrowser.org/oma/group/F1SI68/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E0CZ26-1", "protein_name": "Potassium channel tetramerisation domain containing 18", "gene_name": "Kctd18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLKAELQASKGAMAGHEAEDVLDILRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACIINRDGHLFKYILDYLHGEVQTPSDEQTRAALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIDKQLGGRIHSKSIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLHGSLRHMAPIRKRRLIALREEDEGVNCKTGPKPVRFLGPSTSTQIKVKNSASVRVSPANAAQISSQATANRSHRGSCGKAAQCSVATGASGHAPASPDAQSSENQATHPPPAKVLLSEKKSPPPRVIKLRRTPLRGGPSLPTASAGGQACFPQPPSLEASSSLGVQMETRKDQPDG", "length": 429 }, "evidence": [ { "id": "F1SI68", "url": "https://omabrowser.org/oma/group/F1SI68/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q29RJ0-1", "protein_name": "BTB/POZ domain-containing protein KCTD18", "gene_name": "KCTD18", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEGHKAEEEVLDILRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGHLFKYLLDYLHGEVHIPTEEQTRVALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYSTKTDGTDAIDKQLGGRIHSKSIFKREAGNNVQYIWSDYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLLGSLSHMAPIRKRRLIVNEEEEEGVNCKTGPKPVRFLGPSTSTQIKVKNSASIRVSPASAPQPWPRATANLAAGGRAVQRSAQSKVPTPVGTGLPEHPQAAQGPGAPENGATHLPPAKVLLSDKTATPHRVIKLRRTPLCATGSSLPACTTPRPAGPPEPPPDALSPLGTWTENGQDQTK", "length": 422 }, "evidence": [ { "id": "F1SI68", "url": "https://omabrowser.org/oma/group/F1SI68/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6PI47-1", "protein_name": "BTB/POZ domain-containing protein KCTD18", "gene_name": "KCTD18", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLHGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGRIHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLLGSLRHMAPIRKRRLITFNEADESVNYKTGPKPVRFLGPSTSTQIKVKNSASVTVSPASAIQTSAGATANRFQSGSRRKAAQRSAPSRATALVGTGAPGHPQASPGAASAENGGTHLPPAKVLLSDKKPTPQRVIKLKRTPLCATAPCLPSPTATRQANSLKPLPGEAARALGVRTENGKNKGN", "length": 426 }, "evidence": [ { "id": "F1SI68", "url": "https://omabrowser.org/oma/group/F1SI68/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein homooligomerization", "id": "GO:0051260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051260", "evidence": [ { "database": "UniProtKB", "id": "F1SI68", "url": "https://www.uniprot.org/uniprotkb/F1SI68" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 149, "end_pos": 151, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SI68", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI68" }, { "id": "PF19321", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19321" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB/POZ", "eco_id": "ECO_0000259", "start_pos": 114, "end_pos": 403, "start_aa": "Tyr", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SI68", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI68" }, { "id": "PF02214", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02214" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Potassium channel tetramerisation-type BTB", "eco_id": "ECO_0000259", "start_pos": 14, "end_pos": 98, "start_aa": "Leu", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 149, "end_pos": 151 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SI72-1", "uniprot_ac": "F1SI72", "uniprot_id": "F1SI72_PIG", "mass": { "chemical_mass": 36602.0, "monoisotopic_mass": 36602.0 }, "refseq": { "ac": "XP_003133618", "name": "tRNA wybutosine-synthesizing protein 5 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133618" }, "gene_names": [ { "name": "TYW5", "type": "recommended", "evidence": [ { "id": "F1SI72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ] }, { "name": "TYW5", "type": "synonym", "evidence": [ { "id": "XP_003133618", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133618" } ] } ], "protein_names": [ { "name": "tRNA wybutosine-synthesizing protein 5", "type": "recommended", "evidence": [ { "id": "F1SI72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI72/entry#names_and_taxonomy" } ] }, { "name": "1.14.11.42", "type": "synonym", "evidence": [ { "id": "F1SI72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI72/entry#names_and_taxonomy" } ] }, { "name": "tRNA wybutosine-synthesizing protein 5 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003133618", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133618" } ] }, { "name": "tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine(37)-C(2))-hydroxylase", "type": "synonym", "evidence": [ { "id": "F1SI72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI72/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "tRNA hydroxylase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the hydroxylation of 7-(a-amino-a-carboxypropyl)wyosine (yW-72) into undermodified hydroxywybutosine (OHyW*). OHyW* being further transformed into hydroxywybutosine (OHyW) by LCMT2/TYW4. OHyW is a derivative of wybutosine found in higher eukaryotes.", "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72#function" }, { "database": "UniProtKB", "id": "ARBA00054171", "url": "https://www.uniprot.org/uniprotkb/ARBA00054171#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TYW5", "url": "https://www.uniprot.org/uniprotkb/F1SI72", "locus": { "chromosome": "15", "start_pos": 103556155, "end_pos": 103578816, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016087", "url": "https://www.ensembl.org/id/ENSSSCG00000016087" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016087", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016087", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100522402", "url": "https://www.ncbi.nlm.nih.gov/gene/100522402", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003347", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003347", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041667", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041667", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522402", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522402", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LYDDRPV", "url": "https://omabrowser.org/oma/group/LYDDRPV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SI72", "url": "https://www.orthodb.org/?gene=F1SI72", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12461", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12461", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12461:SF104", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12461:SF104", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13621", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13621", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003133618", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133618", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "37899", "url": "https://www.rhea-db.org/rhea/37899", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI72-1", "url": "https://www.uniprot.org/uniprotkb/F1SI72-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGQRFLVPRLEGVSQEQFTEHLYPQRKPLVLEGIDLGACTSKWTVDYLSQVGGRKEVKIHVAAVAQMDFISKNFVYRTLPFDKLVQRAAEEKHKEFFISEDEKYYLRSLGEDPRKDVADIRKQFPLLEGDIKFPKFFKEEQFFSSVFRISSPGLQLWTHYDVMDNFLIQVTGKKRVVLFSPRDAQYLYLSGSKSEVLNIDNPDLAKYPLFSKARWYECSLKAGDVLFIPALWFHNVVSEEFGVGVNVFWKHLPSECYDKTDTYGNKDPTAASRAAQILDRALKTLGELPEEYRDFYARRMVLHIQDKAYSKNFE", "length": 315, "header": "tr|F1SI72-1|F1SI72_PIG Isoform 1 of tRNA wybutosine-synthesizing protein 5 OS=Sus scrofa OX=9823 GN=TYW5 PE=3 SV=1 CANONICAL=F1SI72-1" }, "isoforms": [ { "isoform_ac": "F1SI72-1", "url": "https://www.uniprot.org/uniprotkb/F1SI72/entry#F1SI72-1", "sequence": { "sequence": "MAGQRFLVPRLEGVSQEQFTEHLYPQRKPLVLEGIDLGACTSKWTVDYLSQVGGRKEVKIHVAAVAQMDFISKNFVYRTLPFDKLVQRAAEEKHKEFFISEDEKYYLRSLGEDPRKDVADIRKQFPLLEGDIKFPKFFKEEQFFSSVFRISSPGLQLWTHYDVMDNFLIQVTGKKRVVLFSPRDAQYLYLSGSKSEVLNIDNPDLAKYPLFSKARWYECSLKAGDVLFIPALWFHNVVSEEFGVGVNVFWKHLPSECYDKTDTYGNKDPTAASRAAQILDRALKTLGELPEEYRDFYARRMVLHIQDKAYSKNFE", "length": 315, "header": "tr|F1SI72-1|F1SI72_PIG Isoform 1 of tRNA wybutosine-synthesizing protein 5 OS=Sus scrofa OX=9823 GN=TYW5 PE=3 SV=1 CANONICAL=F1SI72-1" }, "locus": { "chromosome": "15", "start_pos": 103578738, "end_pos": 103560393, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017515.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017515.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017043.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017043.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522402", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522402", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZX53-1", "protein_name": "tRNA wybutosine-synthesizing protein 5", "gene_name": "TYW5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MERREQPAVQVPSLDGVTRERFLRDVYPRREPVVLKGMELGPCTTKWTVDYLSQAAGSKEVKIHVSAVPQMDFLSKNFVYRTLPFDVFVRRAAEVKHKDYFLSEDEKYYLRSVGEDVRKDIADIRKQFPVLAEDVQIPEYFEKEQFFSSVFRISSAGLQLWTHYDVMDNFLIQVTGRKRVVLYSPRDVPYLYLSGTKSEVLDVDNPDFEKYPLFAKAKRYQCYLEAGDVLFIPAMWFHNVISEEFGVALNVFWKHLPAECYDKSDTYGNKDPTAASRAIQILDRALKTLEELPEEYRDFYARRMVLRIQEKAYRNDNG", "length": 318 }, "evidence": [ { "id": "F1SI72", "url": "https://omabrowser.org/oma/group/F1SI72/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7F7U3-1", "protein_name": "tRNA wybutosine-synthesizing protein 5 isoform X3", "gene_name": "Tyw5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEQCLPVPRLRGVTREHFMEHLYPQRMPLVLEGLDLGSCTSKWTVGYLSQAGGTKEVKVHVAAVPQMNFIKLYRLTNWSREQPKKHIKNSSFQRMRNTTYGLLEKTQGSLFVCLSMQDVADIRQQFPSLGGDIKFPIFFEEGQFFSSVFRISSPGLQLWTHYDVMDNFLIQVTGKKRVILFSPRDAHYLYLSGSKSEVLDIDSPDLDKYPLFPKARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNVFWKHLPSECYDKTDTYGNKDPVAASRAVQILDRALKTLAELPEEYRDFYARQMVLRIQDKAYSKNFK", "length": 317 }, "evidence": [ { "id": "F1SI72", "url": "https://omabrowser.org/oma/group/F1SI72/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A2RSX7-1", "protein_name": "tRNA wybutosine-synthesizing protein 5", "gene_name": "Tyw5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEQRLPVPRLRGVSREQFMEHLYPQRKPLVLEGLDLGSCTSKWTVDYLSQVGGTKEVKIHVAAVPQMDFISKNFVYRTLPFNKLVQRAAEETHKEFFISEDEKYYLRSLGEDPRKDVADIRQQFPSLGGDITFPMFFREEQFFSSVFRISSPGLQLWTHYDVMDNFLIQVTGKKRITLFNPRDAQYLYLSGSKSEVLNIDSPDLDKYPLFPKARRYECSLEAGDVLFIPALWFHNVVSEEFGVGVNIFWKHLPSECYDTTDTYGNKDPVAASRAVQILDRALKTLAELPEEYRDFYARQMVLRIQDKAYSKNFE", "length": 315 }, "evidence": [ { "id": "F1SI72", "url": "https://omabrowser.org/oma/group/F1SI72/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2RUC4-1", "protein_name": "tRNA wybutosine-synthesizing protein 5", "gene_name": "TYW5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGQHLPVPRLEGVSREQFMQHLYPQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTLPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPSECYDKTDTYGNKDPTAASRAAQILDRALKTLAELPEEYRDFYARRMVLHIQDKAYSKNSE", "length": 315 }, "evidence": [ { "id": "F1SI72", "url": "https://omabrowser.org/oma/group/F1SI72/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3ZY75-1", "protein_name": "tRNA wybutosine-synthesizing protein 5", "gene_name": "Tyw5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEQRLPVPRLRGVSREQFMEHLYPQRKPLVLEGLDLGSCTSKWTVDYLSQVGGTKEVKIHVAAVAQMDFISKNFVYRTLPFNKLVQRAAEETHKEFFISQDERYYLRSLGEDPRKVRVVDLKQSLKMSDIADIRQQFPSLGEDITFPMFFREEQFFSSVFRISSPGLQLWTHYDVMDNFLIQVTGKKRITLFSPRDAQYLYLSGSKSEVLNIDSPDLDKYPLFPKARRYECSLEAGDVLFIPALWFHNVVSEEFGVGVNVFLKHLPSECYDTTDTYGNKDPVAASRAMQILDRALKTLAELPEEYRDFYARQMVLRIQDKAYSKNSE", "length": 328 }, "evidence": [ { "id": "F1SI72", "url": "https://omabrowser.org/oma/group/F1SI72/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MKS9-1", "protein_name": "tRNA wybutosine-synthesizing protein 5", "gene_name": "TYW5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGHGFPVPRFEGVSQEQFIEHLYPQRKPLVLEGIDLGACTSKWTVDYLSQVGGRKEVKIHVAAVAQMDFISKNFVYRTLPFDKLVLRAAEEKHTEFFISEDEKYYLRSLGEDPRKDVADIRKQFPLLEGDIKFPKFFKEEQFFSSVFRISSPGLQLWTHYDVMDNFLIQVTGKKRVVLFSPRDAQYLYLSGSKSEVLNIDNPDLAKYPLFSKARRYECSLKAGDVLFIPALWFHNVISEEFGVGVNVFWKHLPSECYDKTDTYGNKDLTAASRAVQILDRALKTLGELPEEYRDFYARRMVLHIQDKAYSKNFE", "length": 315 }, "evidence": [ { "id": "F1SI72", "url": "https://omabrowser.org/oma/group/F1SI72/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "iron ion binding", "id": "GO:0005506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005506", "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ], "pmid": "" }, { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ], "pmid": "" }, { "name": "tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity", "id": "GO:0102524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0102524", "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "wybutosine biosynthetic process", "id": "GO:0031591", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031591", "evidence": [ { "database": "UniProtKB", "id": "F1SI72", "url": "https://www.uniprot.org/uniprotkb/F1SI72" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "37899", "name": "", "equation": "7-[(3S)-3-amino-3-carboxypropyl]wyosine(37) in tRNA(Phe) + 2-oxoglutarate + O2 = 7-(2-hydroxy-3-amino-3-carboxypropyl)wyosine(37) in tRNA(Phe) + succinate + CO2", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "37899", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/37899" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SI72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI72" }, { "id": "PS51184", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51184" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "JmjC", "eco_id": "ECO_0000259", "start_pos": 123, "end_pos": 267, "start_aa": "Lys", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SI78-1", "uniprot_ac": "F1SI78", "uniprot_id": "F1SI78_PIG", "mass": { "chemical_mass": 191700.0, "monoisotopic_mass": 191700.0 }, "refseq": {}, "gene_names": [ { "name": "STRC", "type": "recommended", "evidence": [ { "id": "F1SI78", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI78" } ] } ], "protein_names": [ { "name": "Stereocilin", "type": "synonym", "evidence": [ { "id": "F1SI78", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SI78/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SI78", "url": "https://www.uniprot.org/uniprotkb/F1SI78" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "STRC", "url": "https://www.uniprot.org/uniprotkb/F1SI78", "locus": { "chromosome": "1", "start_pos": 127852339, "end_pos": 127835622, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004702", "url": "https://www.ensembl.org/id/ENSSSCG00000004702" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004702", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004702", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR026664", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026664", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23412", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23412", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23412:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23412:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21058", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21058", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A0C0", "url": "https://www.uniprot.org/uniprotkb/A0A287A0C0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0C0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0C0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI78", "url": "https://www.uniprot.org/uniprotkb/F1SI78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SI78-1", "url": "https://www.uniprot.org/uniprotkb/F1SI78-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALSLWPLLLLLLSWAVTLVPTGPQSLDSGLFLLKSFFSALDQAPQRSLSRSRFSAFLANISSSFEPGRMGEGPVGEPPPLQPPALRLHDFLVTLRGSPDWEPMLGLLGDVLALLGQEQTPRDFLGHQAGVLGGLAEVLLGALVPGGPPTPTRPPCTRDGPSDCVLTADWLPSLLLLLEGTRWQALVQVQPDIDLTNATGLDGREPAPHLLQGLLSLLTPVGELGSEEALWGGLLRTVGAPLYATFQEGLLRVTHSLQDEVFSVLGQPEPDANGQCQGGNLQQLLLWGIRHNLSWDVQALGFLSGSPPPPPALLHCLSTGVPLPRTSQPSAHISPRQRRAISVEALCENHSAPAPPYSISNFSIHLLCQQVKPTTPQPPPSTAAICQTAVWYAVSWVPGAQGWLQACHDQFPDQFLEAICGNLSFSTLLGPNRRLIKRLCAGLLPPPTSCPEGLPPVPVTPEIFWGCFLENETLWAEQLCGEASLQAVPPSNQAWVQHVCQGPTPDVTASPPCHIGPCGERCPDGGSFLMMVCANDTMYEALVPFWPWLAGQCRISRGGNDTCFLEGLLGPLLPSLPPLGPSPLCLAPGPFLLGMLSQLPRCQSSVPALAHSTRLHYFLRLLAFLLGPGAGGNEAQGMLGQALMLSSLPDNCSFWDAFRPEGRRSVLRTVGEYLEQEEQPTPLDFDPTASSSSGLSKMELLACFSPVLWDLLQREKSVWALQILVQAYLHMPPENLQQVVLSAEREAAQGFLTLMHFLGQLQVPPSEEQALGRLTALLLQRYPRLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANDSVLAAIRDYSPGMRPEQKEALAKRLLAPELFGEVPAWPQELLWAVLPLLPHLPLENFLQLSPHQIQALGDSWPAAGLGPGHARHVLRSLVNQSVHDGEEQVRRLGPLACFLSPEELQSLAPLNDPMGPIERGLLECAANGTLSPQGRVAYELLGVLRSSGGAVLSPRELRVWAPLFPQLGLRFLQELSEPQLRAMLPALQGTSVTPAQAVLLLGRLLPRHDLSLEEFCSLHPLLPGLSSQTLQAIPRRVLVGACSCLAPELSRLSACQTAALLQTFRVKDGVKNMGATGAGAAVCIPGQPIPTTWPDCLLPLLPLKLLHLDSAALLADRRRYRELPWSEQQAQFLWKKMQVPTNMTLRNLQALGTLAGGMSCEFLQQISSMADFLEVVHMVYQLPTGVRGSLRTCIWAELQRRMAMPEPELAALGPELSGLDTKLLLDLPIRLIDRLSNESIMLVVELVRGTPEQLLALTPLHRAALAERALQNLAPKETIVSREVLETLGPLVGFLGTESTRRIPLQILLAHLSQLQGFCLGELFATELGELLLQEPLLGKPELWSQDEIEQAGRLVFTLSAEAISLVPREALSPETLERLLEKQQSWEQSRAGQLCAGPRLAPKKAALVAGVVRPAAVNLPEPVPNCADIRGTFPSAWSATQIAEMELSDFEDCLALFAGDPGLGPEELRAAMRKAKQLWGPPRGFHPEQILQLGRLLIGLGERELQELDLVDWGVLSTLGQIDGWSSVQLRVVVSSFLRQSGRHVSHLDFLHLTALGYTLCGLRPEELQHISSWEFSQAALFLGNLRLPCSEEQLEVLAQLLVLPGGFGPISNWGPEIFTEIGTIAAGIPDLALSALLRGQIQGLTPLAISVIPAPKFAVVFSPTQLSSLTSVQAVAVTPEQMAFLSPEQRRAVAWAQYEGKESPEQQGRSTAWGLQDWSQPSWALALTICFLGNLL", "length": 1766, "header": "tr|F1SI78-1|F1SI78_PIG Isoform 1 of Stereocilin OS=Sus scrofa OX=9823 GN=STRC PE=4 SV=3 CANONICAL=F1SI78-1" }, "isoforms": [ { "isoform_ac": "A0A287A0C0-1", "url": "https://www.uniprot.org/uniprotkb/F1SI78/entry#A0A287A0C0-1", "sequence": { "sequence": "MLGQALMLSSLPDNCSFWDAFRPEGRRSVLRTVGEYLEQEEQPTPLDFDPTASSSSGLSKMELLACFSPVLWDLLQREKSVWALQILVQAYLHMPPENLQQVVLSAEREAAQGFLTLMHFLGQLQVPPSEEQALGRLTALLLQRYPRLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANDSVQQGCTELGHNSSEQGLGVRPVILPSLAAIRDYSPGMRPEQKEALAKRLLAPELFGEVPAWPQELLWAVLPLLPHLPLENFLQLSPHQIQALGDSWPAAGLGPGHARHVLRSLVNQSVHDGEEQVRRLGPLACFLSPEELQSLAPLNDPMGPIERGLLECAANGTLSPQGRVAYELLGVLRSSGGAVLSPRELRVWAPLFPQLGLRFLQELSEPQLRAMLPALQGTSVTPAQAVLLLGRLLPRHDLLHLDSAALLADRRRYRELPWSEQQAQFLWKKMQVPTNMTLRNLQALGTLAGGMSCEFLQQISSMADFLEVVHMVYQLPTGVRGSLRTCIWAELQRRMAMPEPELAALGPELSGLDTKLLLDLPIRLIDRLSNESIMLVVELVRGTPEQLLALTPLHRAALAERALQNLAPKETIVSREVLETLGPLVGFLGTESTRRIPLQILLAHLSQLQGFCLGELFATELGELLLQEPLLGKPELWSQDEIEQAGRLVFTLSAEAISLVPREALSPETLERLLEKQQSWEQSRAGQLCAGPRLAPKKAALVAGVVRPAAVNLPEPVPNCADIRGTFPSAWSATQIAEMELSDFEDCLALFAGDPGLGPEELRAAMRKAKQLWGPPRGFHPEQILQLGRLLIGLGERELQELDLVDWGVLSTLGQIDGWSSVQLRVVVSSFLRQSGRHVSHLDFLHLTALGYTLCGLRPEELQHISSWEFSQAALFLGNLRLPCSEEQLEVLAQLLVLPGGFGPISNWGPEIFTEIGTIAAGIPDLALSALLRGQIQGLTPLAISVIPAPKFAVVFSPTQLSSLTSVQAVAVTPEQMAFLSPEQRRAVAWAQYEGKESPEQQGRSTAWGLQDWSQPSWALALTICFLGNLL", "length": 1059, "header": "tr|A0A287A0C0-1|A0A287A0C0_PIG Computationally mapped isoform of Stereocilin OS=Sus scrofa OX=9823 GN=STRC PE=4 SV=3 CANONICAL=F1SI78-1" }, "locus": { "chromosome": "1", "start_pos": 127852270, "end_pos": 127838893, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060117.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060117.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037193.3", "url": "https://www.ensembl.org/id/ENSSSCP00000037193.3" } ] } }, { "isoform_ac": "F1SI78-1", "url": "https://www.uniprot.org/uniprotkb/F1SI78/entry#F1SI78-1", "sequence": { "sequence": 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"length": 1766, "header": "tr|F1SI78-1|F1SI78_PIG Isoform 1 of Stereocilin OS=Sus scrofa OX=9823 GN=STRC PE=4 SV=3 CANONICAL=F1SI78-1" }, "locus": { "chromosome": "1", "start_pos": 127852270, "end_pos": 127835821, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005193.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005193.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005067.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005067.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1021, "start_aa": "Thr", "end_pos": 1021, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1021", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": 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"isoform_ac": "A0A287BIW0-1", "url": "https://www.uniprot.org/uniprotkb/F1SIC5/entry#A0A287BIW0-1", "sequence": { "sequence": "MLGSSLPSALALSLLLVSGSLLPGPGAAQNAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWIWRKKENGMLVDIVNTSGRFIIINRENYTELSIMNLQITEDPGEYECNATNSIGSVSVVTILRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN", "length": 193, "header": "tr|A0A287BIW0-1|A0A287BIW0_PIG Computationally mapped isoform of Neuroplastin OS=Sus scrofa OX=9823 GN=NPTN PE=1 SV=2 CANONICAL=F1SIC5-1" }, "locus": { "chromosome": "7", "start_pos": 59836909, "end_pos": 59768816, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037384.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037384.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056002.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056002.3" } ] } }, { "isoform_ac": "A0A8W4FIS6-1", "url": "https://www.uniprot.org/uniprotkb/F1SIC5/entry#A0A8W4FIS6-1", "sequence": { "sequence": "MLLLFFPRGFQSPGVRRSREQRGPVIITPTYSYPGRMLGSSLPSALALSLLLVSGSLLPGPGAAQNAGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRIVTSEEVIIRESPVLPVTLQCNLTSNSHTLTYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFASAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWIWRKKENGMLVDIVNTSGRFIIINRENYTELSIMNLQITEDPGEYECNATNSIGSVSVVTILRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDAGPMKTNSTNNHKDKNLRQRNTN", "length": 430, "header": "tr|A0A8W4FIS6-1|A0A8W4FIS6_PIG Computationally mapped isoform of Neuroplastin OS=Sus scrofa OX=9823 GN=NPTN PE=1 SV=1 CANONICAL=F1SIC5-1" }, "locus": { "chromosome": "7", "start_pos": 59836909, "end_pos": 59714080, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095306.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095306.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078788.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078788.1" } ] } }, { "isoform_ac": "F1SIC5-1", "url": "https://www.uniprot.org/uniprotkb/F1SIC5/entry#F1SIC5-1", "sequence": { "sequence": "MLGSSLPSALALSLLLVSGSLLPGPGAAQNAGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRIVTSEEVIIRESPVLPVTLQCNLTSNSHTLTYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFASAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWIWRKKENGMLVDIVNTSGRFIIINRENYTELSIMNLQITEDPGEYECNATNSIGSVSVVTILRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDKNLRQRNTN", "length": 398, "header": "tr|F1SIC5-1|F1SIC5_PIG Isoform 1 of Neuroplastin OS=Sus scrofa OX=9823 GN=NPTN PE=1 SV=5 CANONICAL=F1SIC5-1" }, "locus": { "chromosome": "7", "start_pos": 59836909, "end_pos": 59768816, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002147.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002147.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002097.5", "url": "https://www.ensembl.org/id/ENSSSCP00000002097.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 59, "start_aa": "Thr", "end_pos": 59, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr59", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "immunological synapse", "id": "GO:0001772", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001772", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 10, "go_terms": [ { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "modulation of chemical synaptic transmission", "id": "GO:0050804", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050804", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "regulation of multicellular organismal process", "id": "GO:0051239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051239", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "regulation of macromolecule metabolic process", "id": "GO:0060255", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060255", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "intracellular calcium ion homeostasis", "id": "GO:0006874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006874", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "homophilic cell adhesion via plasma membrane adhesion molecules", "id": "GO:0007156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007156", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "axon guidance", "id": "GO:0007411", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007411", "evidence": [ { "database": "UniProtKB", "id": "F1SIC5", "url": "https://www.uniprot.org/uniprotkb/F1SIC5" } ], "pmid": "" }, { "name": "dendrite self-avoidance", "id": "GO:0070593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070593", 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"https://www.ensembl.org/id/ENSSSCG00000001907" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001907", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001907", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01815", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01815", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14326", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14326", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157747", "url": "https://www.ncbi.nlm.nih.gov/gene/100157747", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015940", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015940", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029071", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029071", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047877", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047877", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047878", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047878", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157747", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157747", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HAINLLM", "url": "https://omabrowser.org/oma/group/HAINLLM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SIE4", "url": "https://www.orthodb.org/?gene=F1SIE4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10677", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10677", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10677:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10677:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00240", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00240", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001230611", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230611", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SIE4", "url": "https://www.uniprot.org/uniprotkb/F1SIE4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIE4-1", "url": "https://www.uniprot.org/uniprotkb/F1SIE4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLSDWHLAVKLADQPLAPKSILRLPEAELGEYSLGGYSISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEPDQKPEPVDKVAALREFRVLHTALHSSSSYREAVFKMLSNKESLDQIIVATPGLSSDPIALGVLQDKDLFSVFADPNMLDTLVPAHPALVNAIVLVLHSVAGSTPLPGADTSSRGMPSSSYRDMPGGFLFEGLSDEEDDFHPSARSTPSSSTSSSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQSQWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGAP", "length": 380, "header": "tr|F1SIE4-1|F1SIE4_PIG Isoform 1 of Ubiquitin-like protein 7 OS=Sus scrofa OX=9823 GN=UBL7 PE=1 SV=1 CANONICAL=F1SIE4-1" }, "isoforms": [ { "isoform_ac": "F1SIE4-1", "url": "https://www.uniprot.org/uniprotkb/F1SIE4/entry#F1SIE4-1", "sequence": { "sequence": "MSLSDWHLAVKLADQPLAPKSILRLPEAELGEYSLGGYSISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEPDQKPEPVDKVAALREFRVLHTALHSSSSYREAVFKMLSNKESLDQIIVATPGLSSDPIALGVLQDKDLFSVFADPNMLDTLVPAHPALVNAIVLVLHSVAGSTPLPGADTSSRGMPSSSYRDMPGGFLFEGLSDEEDDFHPSARSTPSSSTSSSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQSQWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGAP", "length": 380, "header": "tr|F1SIE4-1|F1SIE4_PIG Isoform 1 of Ubiquitin-like protein 7 OS=Sus scrofa OX=9823 GN=UBL7 PE=1 SV=1 CANONICAL=F1SIE4-1" }, "locus": { "chromosome": "7", "start_pos": 59084004, "end_pos": 59072129, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002136.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002136.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002086.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002086.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 243, "start_aa": "Thr", "end_pos": 243, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr243", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 290, "start_aa": "Thr", "end_pos": 290, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr290", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIE4", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157747", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157747", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZWS3-1", "protein_name": "Ubiquitin-like protein 7", "gene_name": "Ubl7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRGASGFRQEDQRRKRERERERMSLSDWHLAVKLADQPLAPKSILQLPETELGEYSLGGYSISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEPDQKPEPVDKVAALREFRVLHTALHSSSSYREAVFKMLNNKESLDQIIVATPGLSSDPIALGVLQDKDLFSVFADPNMLDTLVPAHPALVNAIILVLHSVAGSTPMPGADSSSRSMPSSSYRDMPGGFLFDGLSDDEDDFHPSTRSTPSSSTPSSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPITNDLFSQALQHALQASGQQPSLQSQWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGAP", "length": 404 }, "evidence": [ { "id": "F1SIE4", "url": "https://omabrowser.org/oma/group/F1SIE4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZI60-1", "protein_name": "Ubiquitin-like protein 7", "gene_name": "UBL7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAVSEWHIAVKLADQPLAPKSILRLPETELGECPLSGCSISHLKQLITGKLQESVPDPELIDLIYCGRKLRDDQTLDFYGIQSGSTVHVLRKSWPEPDQKPEPVDKVAAVREFRVLHTALHSSPAYRDAVFKMLGNKESLDQIIVATPGLSSDPVALGVLQDKDLFSVFADPNMLDTLIPAHPALVNAIVLVLHSVAGSTPLPAPETSSRGMSSGSYRDMPGGFLFEGLSDDEDDFHQSTRSTPSSSTSGSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSSVQSGTPITNDLFSQALQHALQASGQPSLQSQWQPQLQQLRDMGIHDDELSLRALQATGGDIQAALELIFAGGAP", "length": 380 }, "evidence": [ { "id": "F1SIE4", "url": "https://omabrowser.org/oma/group/F1SIE4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HEH6-1", "protein_name": "Ubiquitin-like protein 7", "gene_name": "Ubl7", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSLSDWHLAVKLADQPLAPKSILQLPETEVGEYSLGAYSISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEPDQKPEPVDKVAALREFRVLHTALHSSSSYREAVFKMLSNKESLDQIIVATPGLSSDPIALGVLQDKDLFSVFADPSMLDTLVPAHPALVNAIILVLHSVAGSTPMPGADSSSRSMPSSSYRDMPGGFLFDGLSDDEDDFHPSTRSTPSSSTPSSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVPSGTPITNDLFSQALQHALQASGQPSLQSQWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGAP", "length": 380 }, "evidence": [ { "id": "F1SIE4", "url": "https://omabrowser.org/oma/group/F1SIE4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q91W67-1", "protein_name": "Ubiquitin-like protein 7", "gene_name": "Ubl7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSLSDWHLAVKLADQPLAPKSILQLPETELGEYSLGGYSISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEPDQKPEPVDKVAALREFRVLHTALHSSSSYREAVFKMLSNKESLDQIIVATPGLSSDPIALGVLQDKDLFSVFADPNMLDTLVPAHPALVNAIILVLHSVAGSTPMPGADSSSRSMPSSSYRDMPGGFLFDGLSDDEDDFHPSTRSTPSSSTPSSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQIQWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGAP", "length": 380 }, "evidence": [ { "id": "F1SIE4", "url": "https://omabrowser.org/oma/group/F1SIE4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96S82-1", "protein_name": "Ubiquitin-like protein 7", "gene_name": "UBL7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLSDWHLAVKLADQPLTPKSILRLPETELGEYSLGGYSISFLKQLIAGKLQESVPDPELIDLIYCGRKLKDDQTLDFYGIQPGSTVHVLRKSWPEPDQKPEPVDKVAAMREFRVLHTALHSSSSYREAVFKMLSNKESLDQIIVATPGLSSDPIALGVLQDKDLFSVFADPNMLDTLVPAHPALVNAIVLVLHSVAGSAPMPGTDSSSRSMPSSSYRDMPGGFLFEGLSDDEDDFHPNTRSTPSSSTPSSRPASLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPITNDLFSQALQHALQASGQPSLQSQWQPQLQQLRDMGIQDDELSLRALQATGGDIQAALELIFAGGAP", "length": 380 }, "evidence": [ { "id": "F1SIE4", "url": "https://omabrowser.org/oma/group/F1SIE4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SIE4", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "F1SIE4", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" } ], "pmid": "" }, { "name": "polyubiquitin modification-dependent protein binding", "id": "GO:0031593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031593", "evidence": [ { "database": "UniProtKB", "id": "F1SIE4", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "F1SIE4", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" } ], "pmid": "" }, { "name": "antiviral innate immune response", "id": "GO:0140374", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140374", "evidence": [ { "database": "UniProtKB", "id": "F1SIE4", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SIE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" }, { "id": "PS50030", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50030" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UBA", "eco_id": "ECO_0000259", "start_pos": 333, "end_pos": 377, "start_aa": "Ser", "end_aa": "Gly", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SIE4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIE4" }, { "id": "PS50053", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50053" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like", "eco_id": 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"categories": [ "Genome Annotation" ] }, { "id": "IPR001563", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001563", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029058", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029058", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EMADQFV", "url": "https://omabrowser.org/oma/group/EMADQFV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11802", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11802", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11802:SF472", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11802:SF472", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00450", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00450", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020934236", 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GN=CPVL PE=3 SV=3 CANONICAL=F1SIG3-1" }, "isoforms": [ { "isoform_ac": "F1SIG3-1", "url": "https://www.uniprot.org/uniprotkb/F1SIG3/entry#F1SIG3-1", "sequence": { "sequence": "MWKAPVLLALLMLSPGSDGLFRSIYGKAHVFKPPKGNVGEPLFLTPYIEAGKFAEGRRLSLVAPFPGWNLMSYSGYITVNKTYNSNLFFWFFPAKIDPWNAPVVLWLQGGPGGSSMFGLFVEHGPYVVRRNMTVLARDFPWTTTFSMLYIDNPVGTGFSFTDHPQGYAVDEDDVARDLYSALIQFFLLFSDYKENDFYATGESYAGKYVPALAHYIHALNPAVTLKINLKGIALGDAYFDPESVIGGYAPFLFHIGLLDEKQRKYFQKQCDVCVKYIQEEKWSQAFELLDKLLDGGLTREPSYFQNVTGCPNYYNLLQCTEPEDQSYYGKFLSLPQVRQAIHVGNRTFSDGSKVEKYLREDTVKSVKPWLTEIMNNYKVLIYNGQLDIILAASLTERSLMAMNWKGSQDYKNAERKVWKIFKSDREVAGYVRQVDAFCQVIVRGGGHILPYDQPLRSFDMINRFVFERGWDPY", "length": 473, "header": "tr|F1SIG3-1|F1SIG3_PIG Isoform 1 of Probable serine carboxypeptidase CPVL OS=Sus scrofa OX=9823 GN=CPVL PE=3 SV=3 CANONICAL=F1SIG3-1" }, "locus": { "chromosome": "18", "start_pos": 43689399, "end_pos": 43577298, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018169.5", "url": 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"https://www.uniprot.org/uniprotkb/F1SIG3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q4QR71-1", "protein_name": "Probable serine carboxypeptidase CPVL", "gene_name": "CPVL", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRAQWKVIILLILLMVIPSDGLFHSIYRSILVAQPFKGNAGQPLFLSPYIRTGKIKEGQRKSMVSPFPGMYDKSYAGYITVNQTYNSNLFFWFFPARTQPADAPVVLWLQGGPGGSSMFGLFVEHGPYIITSNMTVLSRDFPWTFSLSMLYIDNPVGTGFSFTDHIQGYAIDEDDVAQDLYSALVQFFKLFPEYAKNDFYITGESYAGKYVPAIAYYIHSLNPVRRFKIRLKGIALGDAYTDPETIIGGYATFLYEVGLLDEQQRRHFRKQCRKCIKYIKEQEWMKAFEVLDELLDGDLTAGPSFFQNVTGCTNYYNILQCTEPEDQSYFSKFLSLPQVRQAIHVGNRNFSDGAEVEKYLREDTVKSVKPWLAEIMNYYKVLIYNGQLDIIVAAALTERSLMTMDWKGSYAYRRTHKKIWKIFESDDEVAGYVRRVGKFHQVIVRGGGHILPYDQPLRSFDMINRFIYDRGWEPYKL", "length": 478 }, "evidence": [ { "id": "F1SIG3", "url": "https://omabrowser.org/oma/group/F1SIG3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9D3S9-1", "protein_name": "Probable serine carboxypeptidase CPVL", "gene_name": "Cpvl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVRAKWKMVVSLILFMVSPGDGLFHAVYRSILVSQSFKGDAGQPLFLSPYIKNGKIKEGQRKSMVSPFPGMNDKSYAGYITVNQTYNSNLFFWFFPARMQPEDAPVVLWLQGGPGGSSMFGLFVEHGPYIITSNMTVVARDFPWTFTLSMLYIDNPVGTGFSFTDHFQGYATSEDDVAQDLYSALIQFFTLFPEYAKNDFYVTGESYAGKYVPALAHYIHSLNPVRKFKIRLKGIAIGDAYTDPESIIGGYAAFLYEIGLLDEQQQKYFQKQCSKCVKYIKEQEWMKAFEILDKLLDGDVTTGSSFFQNVTGCTNYYNILQCTEPKEQSYFAKFLTLPQVRQAIHVGNQNFSDGAEVEKHLREDTVKSVKPWLSEIMNYYKVLIYNGQLDIIVAAALTERSLMAMDWKGSRAYRRARRKVWKIFKSDNEVAGYVRRVGKFHQVIVRGGGHILPYDQPMRSFDMINRFIYDRGWEPYNS", "length": 478 }, "evidence": [ { "id": "F1SIG3", "url": "https://omabrowser.org/oma/group/F1SIG3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H3G5-1", "protein_name": "Probable serine carboxypeptidase CPVL", "gene_name": "CPVL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVGAMWKVIVSLVLLMPGPCDGLFRSLYRSVSMPPKGDSGQPLFLTPYIEAGKIQKGRELSLVGPFPGLNMKSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSMFGLFVEHGPYVVTSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVARDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVKINLNGIAIGDGYSDPESIIGGYAEFLYQIGLLDEKQKKYFQKQCHECIEHIRKQNWFEAFEILDKLLDGDLTSDPSYFQNVTGCSNYYNFLRCTEPEDQLYYVKFLSLPEVRQAIHVGNQTFNDGTIVEKYLREDTVQSVKPWLTEIMNNYKVLIYNGQLDIIVAAALTERSLMGMDWKGSQEYKKAEKKVWKIFKSDSEVAGYIRQAGDFHQVIIRGGGHILPYDQPLRAFDMINRFIYGKGWDPYVG", "length": 476 }, "evidence": [ { "id": "F1SIG3", "url": "https://omabrowser.org/oma/group/F1SIG3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VDT5-1", "protein_name": "Carboxypeptidase", "gene_name": "anon-WO02059370.13", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": 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"MWKQEAEEDEEEEEEEASLDPLKPCSLPKETPIEEQATTAPSQPSCGSEGLHKAIGTLEQVHTQTPTLSRSYPTFQILTNLHVKYKTASGSRLQQRKSQLFWGLPSRHSESLEAILLSSGGPSSLKLSVSPSVFFNKLSFLPRSPELLLPQYCSPTQLPTHEVHATKDLEGMASEPRQLPCPSSPPVPSLPLHLKSFPMDHERVPSGTEVNTQWLTQQEEVPWVSEDQALHSEPKLQRTRPTKLFHSSEVWCKVPWDPGFQQHIPDSLSAFLAEYPSSLLGALTKYEVPCKTIGQNEDLKDSEPAMPAPSLTPTSLPEYQGVSSIGSLSGSKAFWEPTRQREISEFPILVPFQPVDAMREAQATSTLEVPPVPETQRGTMGHNESIQVLQPLMPVLCQPPDSLSEPQKVSPEGGPSVTKDFWETFGHKENPRASGPPIPAPYPPPHPLPELQGGSSLGEPTDYESQWGCRENSSNPWAFEPPALDLDPGCYGTRPLCVPSGSQTPCKGMQGRENCQVSADPVSSSTLPSPSLLESLGTGAQAVLSESKALWEAMRQRENLWTPESPAHAHSPSLVPVPESCRINPVGGLNRSEAAWKDTDHFRNSWASESPSSAFSPPHALELDSLRASPAGVLFDSEARCGDIQMRKNSWASELQACSLPQDPYGPNALEVQSDSESIGGDMGHKEICPNPPSNSMSKSHTSEPTEDQRNCKTDGATLEQKKNCWTIDFPAPAPRSLSAPLPNPHINPEFVRGNVQQGGFPQDPHPPAVDPLQPIPWLPTLDEALKIEPNQPGLPKGELFLGVKAETLSSQEEDVAKVPTNSGIQAWHWSRELELRLRTLQQSPASRSLGPNKSFGSSSGLSPTTQATQSLSSCPPRQTHPPNLCLHSSSCHSPKIQSTVTQPVQISHCYHSNSSSHSQQQKSDRAEQGSQKEQRMKAKMVSQTSFQGSCSHKKAGRKCQGLEGPSNPKVLASGKRQDNASAKKRDCPRKPKGDHGGGDARLGSSTVTGKSQPVQARRLAVVPVSRLSQRTQHRDQSSQHSALSPQLNSK", 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"MWKQEAEEDEEEEEEEASLDPLKPCSLPKETPIEEQATTAPSQPSCGSEGLHKAIGTLEQVHTQTPTLSRSYPTFQILTNLHVKYKTASGSRLQQRKSQLFWGLPSRHSESLEAILLSSGGPSSLKLSVSPSVFFNKLSFLPRSPELLLPQYCSPTQLPTHEVHATKDLEGMASEPRQLPCPSSPPVPSLPLHLKSFPMDHERVPSGTEVNTQWLTQQEEVPWVSEDQALHSEPKLQRTRPTKLFHSSEVWCKVPWDPGFQQHIPDSLSAFLAEYPSSLLGALTKYEVPCKTIGQNEDLKDSEPAMPAPSLTPTSLPEYQGVSSIGSLSGSKAFWEPTRQREISEFPILVPFQPVDAMREAQATSTLEVPPVPETQRGTMGHNESIQVLQPLMPVLCQPPDSLSEPQKVSPEGGPSVTKDFWETFGHKENPRASGPPIPAPYPPPHPLPELQGGSSLGEPTDYESQWGCRENSSNPWAFEPPALDLDPGCYGTRPLCVPSGSQTPCKGMQGRENCQVSADPVSSSTLPSPSLLESLGTGAQAVLSESKALWEAMRQRENLWTPESPAHAHSPSLVPVPESCRINPVGGLNRSEAAWKDTDHFRNSWASESPSSAFSPPHALELDSLRASPAGVLFDSEARCGDIQMRKNSWASELQACSLPQDPYGPNALEVQSDSESIGGDMGHKEICPNPPSNSMSKSHTSEPTEDQRNCKTDGATLEQKKNCWTIDFPAPAPRSLSAPLPNPHINPEFVRGNVQQGGFPQDPHPPAVDPLQPIPWLPTLDEALKIEPNQPGLPKGELFLGVKAETLSSQEEDVAKVPTNSGIQAWHWSRELELRLRTLQQSPASRSLGPNKSFGSSSGLSPTTQATQSLSSCPPRQTHPPNLCLHSSSCHSPKIQSTVTQPVQISHCYHSNSSSHSQQQKSDRAEQGSQKEQRMKAKMVSQTSFQGSCSHKKAGRKCQGLEGPSNPKVLASGKRQDNASAKKRDCPRKPKGDHGGGDARLGSSTVTGKSQPVQARRLAVVPVSRLSQRTQHRDQSSQHSALSPQLNSK", "length": 1051, "header": "tr|F1SIH9-1|F1SIH9_PIG Isoform 1 of SPATA31 subfamily G member 1 OS=Sus scrofa OX=9823 GN=SPATA31G1 PE=4 SV=5 CANONICAL=F1SIH9-1" }, "locus": { "chromosome": "1", "start_pos": 235848767, "end_pos": 235845615, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005835.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005835.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005691.5", "url": "https://www.ensembl.org/id/ENSSSCP00000005691.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIH9", "url": "https://www.uniprot.org/uniprotkb/F1SIH9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 383, "end_pos": 385, "annotation": "n_glycosylation_sequon" }, { "start_pos": 472, "end_pos": 474, "annotation": "n_glycosylation_sequon" }, { "start_pos": 590, "end_pos": 592, "annotation": "n_glycosylation_sequon" }, { "start_pos": 853, "end_pos": 855, "annotation": "n_glycosylation_sequon" }, { "start_pos": 914, "end_pos": 916, "annotation": "n_glycosylation_sequon" }, { "start_pos": 980, "end_pos": 982, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SIH9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1051, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SIH9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SIH9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SIH9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIH9" }, { "id": "PF14650", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14650" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SPATA31", "eco_id": "ECO_0000259", "start_pos": 85, "end_pos": 220, "start_aa": "Tyr", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 383, "end_pos": 385 }, { "start_pos": 472, "end_pos": 474 }, { "start_pos": 590, "end_pos": 592 }, { "start_pos": 853, "end_pos": 855 }, { "start_pos": 914, "end_pos": 916 }, { "start_pos": 980, "end_pos": 982 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SIL0-1", "uniprot_ac": "F1SIL0", "uniprot_id": "F1SIL0_PIG", "mass": { "chemical_mass": 88014.0, "monoisotopic_mass": 88014.0 }, "refseq": { "ac": "XP_013849083", "name": "centrosomal protein of 78 kDa isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849083" }, "gene_names": [ { "name": "CEP78", "type": "recommended", "evidence": [ { "id": "F1SIL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIL0" } ] }, { "name": "CEP78", "type": "synonym", "evidence": [ { "id": "XP_013849083", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849083" } ] } ], "protein_names": [ { "name": "Centrosomal protein of 78 kDa", "type": "recommended", "evidence": [ { "id": "F1SIL0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIL0/entry#names_and_taxonomy" } ] }, { "name": "centrosomal protein of 78 kDa isoform X3", "type": "synonym", "evidence": [ { "id": "XP_013849083", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849083" } ] } ], "function": [ { "annotation": "Centriole wall protein that localizes to mature centrioles and regulates centriole and cilia biogenesis. Involved in centrosome duplication: required for efficient PLK4 centrosomal localization and PLK4-induced overduplication of centrioles. Involved in cilium biogenesis and controls cilium length. Acts as a regulator of protein stability by preventing ubiquitination of centrosomal proteins, such as CCP110 and tektins. Associates with the EDVP complex, preventing ubiquitination and degradation of CCP110. Promotes deubiquitination of tektin proteins (TEKT1, TEKT2, TEK3, TEKT4 and TEKT5) via its interaction with USP16.", "evidence": [ { "database": "UniProtKB", "id": "F1SIL0", "url": "https://www.uniprot.org/uniprotkb/F1SIL0#function" }, { "database": "UniProtKB", "id": "ARBA00060239", "url": "https://www.uniprot.org/uniprotkb/ARBA00060239#function" }, { "database": "UniProtKB", "id": "A0A287B876", "url": "https://www.uniprot.org/uniprotkb/A0A287B876#function" }, { "database": "UniProtKB", "id": "A0A287BRH2", "url": "https://www.uniprot.org/uniprotkb/A0A287BRH2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SIL0", "url": "https://www.uniprot.org/uniprotkb/F1SIL0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CEP78", "url": "https://www.uniprot.org/uniprotkb/F1SIL0", "locus": { "chromosome": "1", "start_pos": 231115940, "end_pos": 231081196, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005286", "url": "https://www.ensembl.org/id/ENSSSCG00000005286" } ] } } ], "crossref": [ { "id": "F1SIL0", "url": "https://alphafold.ebi.ac.uk/entry/F1SIL0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005286", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005286", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154982", "url": "https://www.ncbi.nlm.nih.gov/gene/100154982", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026212", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026212", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24110", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24110", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24110:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24110:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13516", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13516", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2565942", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2565942", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-380259", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-380259", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-380270", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-380270", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-380284", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-380284", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-380320", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-380320", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5620912", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5620912", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8854518", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8854518", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013849083", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013849083", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B876", "url": "https://www.uniprot.org/uniprotkb/A0A287B876", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B876-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B876-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRH2", "url": "https://www.uniprot.org/uniprotkb/A0A287BRH2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRH2-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BRH2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIL0", "url": "https://www.uniprot.org/uniprotkb/F1SIL0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIL0-1", "url": "https://www.uniprot.org/uniprotkb/F1SIL0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIDSVKLRRDSAADFFSHYEYLCALQDSVPVPAVRASLREGVLDFNADRLRLADWAPLLSTLKNNKDLPLVCIKSFFQPWLGETGSDRNKFCRSRVPAIRNKDVTFQLCKALKCCLSASSALKNLELNGLVLRERDLTMLTKGLNKSASLVHLSLANCPVGDGGLEIICQGIKNSITLKTVNFTGCNLTWQGADHMAKILKYQTIRRHEETWAESLRYRRPDLDCMAGLRRITLNCNTLIGDLGASAFAESLSEDLWLRALDLQQCGLTNEGAKALLKALETNRTLVVLDIRKNPLVDHSMMKAVIKKVLQNGRSAKSEYQWITSPSVKEPFKGARQKKRTIILGSGLKGKATIRIVIWRHRGLATKKPVSNGRKNTVGKECYAPEPLPPGVSGFLPWRTAERAKRNRGFPLIKARDVCNQLQQSEYPVTVTVESPSSSEMEEVDDSSESVQEEPEKISLKQKVLQEKLEECLKQLKEERVIRLKADKRVSELEHENAQLRNINFSLSEALHAQSLTSMILDDEGVLGSIENSFQKFHAFLDLLKDAGLGQLAAMAGIDQSDFHLLGHPQMNSTVSSPPKEEKKALEEEKSESKQSALGQMQNIQFQKITGDARIPLPLDSFHVPVSTPEAVETSKDNLGAPVMEQQQKSFEDFIARPCSPSADVISESRRKEEELSRNSRSSSEKMTKTGEYTKKHSAKSQSGKDLHSCSDSPVKRKSKGMGQNSSLGNEPVESESSKKHTSVKKESRIVTVTSKTTKSKLNLLEHSESDTLGSDFEFQESIHTLSRLT", "length": 790, "header": "tr|F1SIL0-1|F1SIL0_PIG Isoform 1 of Centrosomal protein of 78 kDa OS=Sus scrofa OX=9823 GN=CEP78 PE=3 SV=3 CANONICAL=F1SIL0-1" }, "isoforms": [ { "isoform_ac": "A0A287B876-1", "url": "https://www.uniprot.org/uniprotkb/F1SIL0/entry#A0A287B876-1", "sequence": { "sequence": "MIDSVKLRRDSAADFFSHYEYLCALQDSVPVPAVRASLREGVLDFNADRLRLADWAPLLSTLKNNKDLPLVCIKSFFQPWLGETGSDRNKFCRSRVPAIRNKDVTFQLCKALKCCLSASSALKNLELNGLVLRERDLTMLTKGLNKSASLVHLSLANCPVGDGGLEIICQGIKNSITLKTVNFTGCNLTWQGADHMAKILKYQTIRRHEETWAESLRYRRPDLDCMAGLRRITLNCNTLIGDLGASAFAESLSEDLWLRALDLQQCGLTNEGAKALLKALETNRTLVVLDIRKNPLVDHSMMKAVIKKVLQNGRSAKSEYQWITSPSVKEPFKGARQKKRTIILGSGLKGKATIRIGLATKKPVSNGRKNTVGKECYAPEPLPPGVSGFLPWRTAERAKRNRGFPLIKARDVCNQLQQSEYPVTVTVESPSSSEMEEVDDSSESVQEEPEKISLKQKVLQEKLEECLKQLKEERVIRLKADKRVSELEHENAQLRNINFSLSEALHAQSLTSMILDDEGVLGSIENSFQKFHAFLDLLKDAGLGQLAAMAGIDQSDFHLLGHPQMNSTVSSPPKEEKKALEEEKSESKQSALGQMQNIQFQKITGDARIPLPLDSFHVPVSTPEAVETSKDNLGAPVMEQQQKSFEDFIARPCSPSADVISESRRKEEELSRNSRSSSEKMTKTESH", "length": 687, "header": "tr|A0A287B876-1|A0A287B876_PIG Computationally mapped isoform of Centrosomal protein of 78 kDa OS=Sus scrofa OX=9823 GN=CEP78 PE=3 SV=3 CANONICAL=F1SIL0-1" }, "locus": { "chromosome": "1", "start_pos": 231115937, "end_pos": 231081441, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063317.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063317.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052731.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052731.3" } ] } }, { "isoform_ac": "A0A287BRH2-1", "url": "https://www.uniprot.org/uniprotkb/F1SIL0/entry#A0A287BRH2-1", "sequence": { "sequence": 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[ { "database": "UniProtKB", "id": "F1SIM5", "url": "https://www.uniprot.org/uniprotkb/F1SIM5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SIM5", "url": "https://www.uniprot.org/uniprotkb/F1SIM5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 5, "end_pos": 7, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SIM5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIM5" }, { "id": "PS50262", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-protein coupled receptors family 1 profile", "eco_id": "ECO_0000259", "start_pos": 31, "end_pos": 281, "start_aa": "Met", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 5, "end_pos": 7 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SIM8-1", "uniprot_ac": "F1SIM8", "uniprot_id": "F1SIM8_PIG", "mass": { "chemical_mass": 79170.0, "monoisotopic_mass": 79170.0 }, "refseq": { "ac": "XP_003134818", "name": "leucine-rich repeat neuronal protein 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134818" }, "gene_names": [ { "name": "LRRN3", "type": "recommended", "evidence": [ { "id": "F1SIM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIM8" } ] }, { "name": "LRRN3", "type": "synonym", "evidence": [ { "id": "XP_003134818", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134818" } ] } ], "protein_names": [ { "name": "Leucine rich repeat neuronal 3", "type": "synonym", "evidence": [ { "id": "F1SIM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIM8/entry#names_and_taxonomy" } ] }, { "name": "leucine-rich repeat neuronal protein 3", "type": "synonym", "evidence": [ { "id": "XP_003134818", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134818" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SIM8", "url": "https://www.uniprot.org/uniprotkb/F1SIM8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LRRN3", "url": "https://www.uniprot.org/uniprotkb/F1SIM8", "locus": { "chromosome": "18", "start_pos": 34425836, "end_pos": 34465665, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016652", "url": "https://www.ensembl.org/id/ENSSSCG00000016652" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016652", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016652", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00063", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00063", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520161", "url": "https://www.ncbi.nlm.nih.gov/gene/100520161", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000372", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000372", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050541", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050541", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520161", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520161", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DKFYMHP", "url": "https://omabrowser.org/oma/group/DKFYMHP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SIM8", "url": "https://www.orthodb.org/?gene=F1SIM8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369:SF213", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369:SF213", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003134818", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134818", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SIM8", "url": "https://www.uniprot.org/uniprotkb/F1SIM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIM8-1", "url": "https://www.uniprot.org/uniprotkb/F1SIM8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKDLPLQIHVLLGLAITTLVQAVDKKADCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIAKIESSIDFPVNLTGLDLSQNNLSSVTNINIKKMPQLLSVYLEENKLTELPEKCLSGLSNLQELYINHNLLSTISPGAFIGLDNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTVESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFREMMEICLPLIAPESFPSNLDLEAGSYVSLHCRATAEPQPEIYWVTPSGKKLLPNTLTDKFYVHSEGTLDITGITPTEGGLYTCIATNLVGADLKSIMIKVDGSFPRDNNGSLNIKIKDVQAHSVLVSWKASSKILKSSVKWTAFVKTENARAAQSARIPSDVKVYNLTHLNPSTEYKICIDIPTIYQKSRKQCVNVTTKSLDPDQKGYEKSNTTTFMACLGGFLGIIGVICLFSCLSQEMNCDGGHSYVRNYLQKPTFAFGELYPPLINLWETGKEKGTGLEVKATVIGVPTHMS", "length": 708, "header": "tr|F1SIM8-1|F1SIM8_PIG Isoform 1 of Leucine rich repeat neuronal 3 OS=Sus scrofa OX=9823 GN=LRRN3 PE=4 SV=1 CANONICAL=F1SIM8-1" }, "isoforms": [ { "isoform_ac": "F1SIM8-1", "url": "https://www.uniprot.org/uniprotkb/F1SIM8/entry#F1SIM8-1", "sequence": { "sequence": "MKDLPLQIHVLLGLAITTLVQAVDKKADCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIAKIESSIDFPVNLTGLDLSQNNLSSVTNINIKKMPQLLSVYLEENKLTELPEKCLSGLSNLQELYINHNLLSTISPGAFIGLDNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTVESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFREMMEICLPLIAPESFPSNLDLEAGSYVSLHCRATAEPQPEIYWVTPSGKKLLPNTLTDKFYVHSEGTLDITGITPTEGGLYTCIATNLVGADLKSIMIKVDGSFPRDNNGSLNIKIKDVQAHSVLVSWKASSKILKSSVKWTAFVKTENARAAQSARIPSDVKVYNLTHLNPSTEYKICIDIPTIYQKSRKQCVNVTTKSLDPDQKGYEKSNTTTFMACLGGFLGIIGVICLFSCLSQEMNCDGGHSYVRNYLQKPTFAFGELYPPLINLWETGKEKGTGLEVKATVIGVPTHMS", "length": 708, "header": "tr|F1SIM8-1|F1SIM8_PIG Isoform 1 of Leucine rich repeat neuronal 3 OS=Sus scrofa OX=9823 GN=LRRN3 PE=4 SV=1 CANONICAL=F1SIM8-1" }, "locus": { "chromosome": "18", "start_pos": 34428475, "end_pos": 34426352, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018130.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018130.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017640.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017640.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 458, "start_aa": "Thr", "end_pos": 458, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr458", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 489, "start_aa": "Thr", "end_pos": 489, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr489", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIM8", "url": "https://www.uniprot.org/uniprotkb/F1SIM8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520161", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520161", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M3AR64-1", "protein_name": "Leucine-rich repeat neuronal protein 3", "gene_name": "lrrn3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKDISFMDYLLVGLAMATFVIAAEEKISCPKLCVCEIRPWFSPSSVYMEAPTIDCNDLGLFKLPTRLPLDTQVLLLQTNNIAKNEHPLDYLTNITEIDLSQNNLSSINDINIGSLPQLLSLHMEENWICSLPDNSLSQLTNLQELYLNHNLISLISPEAFRGLQSLLRLHLNSNRLQIIKSEWFEPLPNLEILMIGENPVLSIQDMNFKPLRNLRSLVLTRMNLSQIPDDSFLGLDNLESISFYDNTFPKVPHGALRHLKSLKFLDLNKNPIGRIQRGDFVDMLHLKELGINSMPELVSIDSFALNNLPELTKIEATNNPKLSYIHPNAFYRLPRLETLMLNGNALSALHRITVESLPNLREVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFCVEPPEYEGQHVRQVHFREMMEICLPLISSESLPTQISMDRGRSVSLHCRAFAEPEPDIYWVTPSGRRVIPNAVFERFYMHPEGTLDIYDITENEAGLYTCVAHNLVGADLKSVSVQVNGYFPQPVNDSLYVSVQSVQTHSVLITWKASHGSLAPNIKWYTMPGANYPTVAFTARVPSDVTLYNLTHLSPATQYKVCVDIHSVHRNHDTKCVNVLTKGLEQIVNDSESWDMALIAAFGVLFIVMSVACFLIYMFMRNHCIYGELKRCPSNTALMSETSQQSPFTRLWISGKGMPAAVEVKATVINVLDNAF", "length": 706 }, "evidence": [ { "id": "F1SIM8", "url": "https://omabrowser.org/oma/group/F1SIM8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0X4X6-1", "protein_name": "Leucine rich repeat neuronal 3", "gene_name": "LRRN3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKDMQLKINFLLGLVITAVVQAVEKKADCPELCICEIRPWFTPRSVYMEVPTVDCNDLGLFNFPARLPADTQVLLLQTNNIGKIEHSVEFPVNLTGLDLSQNNLSSVASINLTKIPQLLSVYLEENKLTELPEECLSGLHNLQELYINHNMLSMIAPGAFIGLSNLLRLHLNSNGLQMINSKWFEAIPNLEILMIGENPIIRIEDMNFKPLINLRSLVLASINLTEIPDNALAGLENLESISFYDNRFVKVPHIALQKVTNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFYRLPKLESLMLNSNALSALYRSTIESLPNLKEVSIHSNPIRCDCVIRWINMNKTNIRFMEPESLFCVDPPEFQGQNVRQIHFREMMEICLPLIAPESFPSTLDLKTGSHISLHCRATAEPEPEIYWITPSGHKLLPNTISDKYYIHSEGTLDISDVTQKESGLYTCIATNLVGADLKSITIKVDGSLPQDSNGPLHIKIKDVRSNSVLVSWKASSKIMKSSVRWTAFLKAENSQAAQSARVPSDIKVYNLTHLNPSTEYKICIDIPTIYPQNKKQCVNVTTKGLDRAVKGYEKNSIIGFLACLGALLGIISVVYLYSCISREMNYDVRHSYLKNYLKKQSISLNELYPPLISLWDMGKEKSTAVEVKSTLIGVPTNMS", "length": 708 }, "evidence": [ { "id": "F1SIM8", "url": "https://omabrowser.org/oma/group/F1SIM8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MSM1-1", "protein_name": "Leucine rich repeat neuronal 3", "gene_name": "LRRN3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKDLPLQIHVLLGLAITTLVQAVDKKADCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLSNFPARLPADTQILLLQTNNIAKIEYSIDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSGLSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPNVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYQGTVESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPESLFCVDPPEFQGQNVRQVHFREMMEICLPLIAPESFPSNLDLEAGSYVSLHCRATAEPQPEIYWITPSGKKLLPNTLTNKFYVHSEGTLDISGITPAEGGLYTCIATNLVGADLKSVMIKVDGSLPQDNNGSLNIKIKDVQANSVLVSWKASSKILKSSIKWTAFVKAENSHAAQSARIPSDVKVYNLTHLNPATEYKICIDIPTIYQTSRKQCVNVTTKGLDPDQKEYEKNNTTTFMACLGGSLGIIGVICLFSFLSQEVNCDGGHNYVRNYLQKPTFAFSELYPPLINLWETGKEKGTALEVKATVIGVPTNMS", "length": 708 }, "evidence": [ { "id": "F1SIM8", "url": "https://omabrowser.org/oma/group/F1SIM8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3I6N3-1", "protein_name": "Leucine-rich repeat neuronal protein 1", "gene_name": "Lrrn3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKDMPLQIHVLFGLAITTLVQAVDKKVDCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHSIDFPVNLTGLDLSQNNLSSVMNINVQKMSQLLSVYLEENKLTELPEKCLYGLGNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGDNPIIRIKDMNFQPLLNLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPASLDVDTDSYVSLHCRATAEPQPEIYWITPSGQKLLPNTLREKFYVHSEGTLDISGITPKEGGLYTCIATNLVGADLKSIMIKVGGSVPHDNNSALNIKIRDIRAHSVLVSWKASSKILKSSVKWTAFVKTEDSHAAQSARIPSDVKVYNLTNLKPSTEYKICIDIPTIYQKSRKQCVNVTTKSLDSDGKEYGKSHTAFMACLGGLLGIIGVMCLLSCVSQDMNCEGEHSYSRNYFHKPTLAFSEFYPPLINLWEPGKEKTAHLEVKATVIGVPTNMS", "length": 707 }, "evidence": [ { "id": "F1SIM8", "url": "https://omabrowser.org/oma/group/F1SIM8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8CBC6-1", "protein_name": "Leucine-rich repeat neuronal protein 3", "gene_name": "Lrrn3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKDTPLQVHVLLGLAITTLVQAIDKKVDCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIAGINLTEIPDDALAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNTNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSDLDVEADSYVSLHCRATAEPQPEIYWITPSGKKLLPNTMREKFYVHSEGTLEIRGITPKEGGLYTCIATNLVGADLKSIMIKVGGSVPQDNNGSLNIKIRDIRANSVLVSWKASSKILKSSVKWTAFVKTEDSHAAQSARIPFDVKVYNLTHLKPSTEYKICIDIPTVYQKSRKQCVNVTTKSLEHDGKEYGKNHTVFVACVGGLLGIIGVMCLFSCVSQEGSSEGEHSYAVNHCHKPALAFSELYPPLINLWESSKEKRATLEVKATAIGVPTNMS", "length": 707 }, "evidence": [ { "id": "F1SIM8", "url": "https://omabrowser.org/oma/group/F1SIM8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ESY6-1", "protein_name": "Leucine-rich repeat neuronal protein 3", "gene_name": "Lrrn3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAPLQIHVLLGLAITALVQAGDKKVDCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHSTDFPVNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQELYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIAGINLTEVPDDALVGLENLESISFYDNRLNKVPQVALQKAVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWINMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSILDVEADSYVSLHCRATAEPQPEIYWITPSGKRLLPNTLREKFYVHSEGTLDIRGITPKEGGLYTCIATNLVGADLKSIMIKVGGFVPQDNNGSLNIKIRDIRANSVLVSWKANSKILKSSVKWTAFVKTEDSQAAQSARIPSDVKVYNLTHLKPSTEYKICIDIPTIYQKSRKQCVNVTTKSLEHDGKENGKSHTVFVACVGGLLGIIGVMCLFGCVSQEGNCENEHSYTVNHCHKPTLAFSELYPPLINLWESSKEKPASLEVKATAIGVPTSMS", "length": 707 }, "evidence": [ { "id": "F1SIM8", "url": "https://omabrowser.org/oma/group/F1SIM8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9H3W5-1", "protein_name": "Leucine-rich repeat neuronal protein 3", "gene_name": "LRRN3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKDMPLRIHVLLGLAITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPANTQILLLQTNNIAKIEYSTDFPVNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTELPEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNLKEISIHSNPIRCDCVIRWMNMNKTNIRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSNLNVEAGSYVSFHCRATAEPQPEIYWITPSGQKLLPNTLTDKFYVHSEGTLDINGVTPKEGGLYTCIATNLVGADLKSVMIKVDGSFPQDNNGSLNIKIRDIQANSVLVSWKASSKILKSSVKWTAFVKTENSHAAQSARIPSDVKVYNLTHLNPSTEYKICIDIPTIYQKNRKKCVNVTTKGLHPDQKEYEKNNTTTLMACLGGLLGIIGVICLISCLSPEMNCDGGHSYVRNYLQKPTFALGELYPPLINLWEAGKEKSTSLKVKATVIGLPTNMS", "length": 708 }, "evidence": [ { "id": "F1SIM8", "url": "https://omabrowser.org/oma/group/F1SIM8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SIM8", "url": "https://www.uniprot.org/uniprotkb/F1SIM8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "signaling receptor activity", "id": "GO:0038023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038023", "evidence": [ { "database": "UniProtKB", "id": "F1SIM8", "url": "https://www.uniprot.org/uniprotkb/F1SIM8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 382, "end_pos": 384, "annotation": "n_glycosylation_sequon" }, { "start_pos": 522, "end_pos": 524, "annotation": "n_glycosylation_sequon" }, { "start_pos": 579, "end_pos": 581, "annotation": "n_glycosylation_sequon" }, { "start_pos": 608, "end_pos": 610, "annotation": "n_glycosylation_sequon" }, { "start_pos": 625, "end_pos": 627, "annotation": "n_glycosylation_sequon" }, { "start_pos": 93, "end_pos": 95, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SIM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIM8" }, { "id": "PS50853", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50853" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 523, "end_pos": 617, "start_aa": "Gly", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SIM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIM8" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 421, "end_pos": 514, "start_aa": "Pro", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 458, 489 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 103, "end_pos": 105 }, { "start_pos": 223, "end_pos": 225 }, { "start_pos": 382, "end_pos": 384 }, { "start_pos": 522, "end_pos": 524 }, { "start_pos": 579, "end_pos": 581 }, { "start_pos": 608, "end_pos": 610 }, { "start_pos": 625, "end_pos": 627 }, { "start_pos": 93, "end_pos": 95 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SIN4-1", "uniprot_ac": "F1SIN4", "uniprot_id": "F1SIN4_PIG", "mass": { "chemical_mass": 36447.0, "monoisotopic_mass": 36447.0 }, "refseq": { "ac": "XP_003480506", "name": "uncharacterized protein C14orf28 homolog", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480506" }, "gene_names": [ { "name": "C1H14orf28", "type": "recommended", "evidence": [ { "id": "F1SIN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIN4" } ] }, { "name": "DORIP1", "type": "recommended", "evidence": [ { "id": "F1SIN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIN4" } ] }, { "name": "C1H14orf28", "type": "synonym", "evidence": [ { "id": "XP_003480506", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480506" } ] }, { "name": "DORIP1", "type": "synonym", "evidence": [ { "id": "F1SIN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIN4" } ] } ], "protein_names": [ { "name": "Chromosome 1 C14orf28 homolog", "type": "synonym", "evidence": [ { "id": "F1SIN4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIN4/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C14orf28 homolog", "type": "synonym", "evidence": [ { "id": "XP_003480506", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480506" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SIN4", "url": "https://www.uniprot.org/uniprotkb/F1SIN4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DORIP1", "url": "https://www.uniprot.org/uniprotkb/F1SIN4", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000030679", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030679", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100736797", "url": "https://www.ncbi.nlm.nih.gov/gene/100736797", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR040029", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040029", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100736797", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736797", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HDNFTRN", "url": "https://omabrowser.org/oma/group/HDNFTRN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SIN4", "url": "https://www.orthodb.org/?gene=F1SIN4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35350", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35350", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35350:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35350:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_003480506", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480506", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2RB67", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB67", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RB67-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RB67-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIN4", "url": "https://www.uniprot.org/uniprotkb/F1SIN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIN4-1", "url": "https://www.uniprot.org/uniprotkb/F1SIN4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENENFPRELSLHLGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLIIDLFGNEHDNFTKNLENLMSTIQESYCSNWRCPTRVQEDQQRTININPPQEIPHGNLIRLAVDELFCSRIELCEERGCGGLREFSQRVFCHGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 310, "header": "tr|F1SIN4-1|F1SIN4_PIG Isoform 1 of Chromosome 1 C14orf28 homolog OS=Sus scrofa OX=9823 GN=DORIP1 PE=4 SV=3 CANONICAL=F1SIN4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RB67-1", "url": "https://www.uniprot.org/uniprotkb/F1SIN4/entry#A0A5G2RB67-1", "sequence": { "sequence": "MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENENFPRELSLHLGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLIIDLFGNEHDNFTKNLENLMSTIQESYCSNWRCPTRVQEDQQRTINIKCGGLREFSQRVFCHGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 280, "header": "tr|A0A5G2RB67-1|A0A5G2RB67_PIG Computationally mapped isoform of Chromosome 1 C14orf28 homolog OS=Sus scrofa OX=9823 GN=C1H14orf28 PE=4 SV=1 CANONICAL=F1SIN4-1" }, "locus": { "chromosome": "1", "start_pos": 175154562, "end_pos": 175149205, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082728.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082728.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073565.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073565.1" } ] } }, { "isoform_ac": "F1SIN4-1", "url": "https://www.uniprot.org/uniprotkb/F1SIN4/entry#F1SIN4-1", "sequence": { "sequence": "MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENENFPRELSLHLGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLIIDLFGNEHDNFTKNLENLMSTIQESYCSNWRCPTRVQEDQQRTININPPQEIPHGNLIRLAVDELFCSRIELCEERGCGGLREFSQRVFCHGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 310, "header": "tr|F1SIN4-1|F1SIN4_PIG Isoform 1 of Chromosome 1 C14orf28 homolog OS=Sus scrofa OX=9823 GN=DORIP1 PE=4 SV=3 CANONICAL=F1SIN4-1" }, "locus": { "chromosome": "1", "start_pos": 175154562, "end_pos": 175149205, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005509.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005509.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005372.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005372.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIN4", "url": "https://www.uniprot.org/uniprotkb/F1SIN4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736797", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736797", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AS79-1", "protein_name": "Similar to human chromosome 14 open reading frame 28", "gene_name": "Dorip1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTAREKGVLLAEKLRLGSFPGSVHLKALGWRQVFYLCMGMCTVYMPCAPRGKKRALDSWNWSYRQWMKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENDNFPRELSLHFGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLVIDLFGNEHDNFTKNLENLMSTIQESYCSNWRCPTRVQEDQQRTISINPPQEIPHGNLIRLAVDELFCSKIELCEERGCGGLREFSQRVFCHGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 376 }, "evidence": [ { "id": "F1SIN4", "url": "https://omabrowser.org/oma/group/F1SIN4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7FZR7-1", "protein_name": "Uncharacterized protein C14orf28 homolog isoform X2", "gene_name": "CUNH14orf28", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MRRGAAAAAAPGLSMSERRRRRVRRHGGLRSRGRMKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENESFPRELSLHFGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLIIDLFGNEHDNFTKNLENLMSTIQESYCSNWRCPTRVQEDQQRTISINPPQEIPHGNLIRLAVDELFCSKIELCEERGCGGLREFSQRIFCHGAPPFVVLNMQHWKPEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 344 }, "evidence": [ { "id": "F1SIN4", "url": "https://omabrowser.org/oma/group/F1SIN4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q2KIN3-1", "protein_name": "Dopamine receptor-interacting protein 1", "gene_name": "DORIP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENENFPRELSLHLGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLIIDLFGNEHDNFTKNLENLMSTIQESYCSNWRCPTRVQEDQQRTINIKCGGLREFSQRVFCHGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 280 }, "evidence": [ { "id": "F1SIN4", "url": "https://omabrowser.org/oma/group/F1SIN4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q4KL13-1", "protein_name": "Dopamine receptor-interacting protein 1", "gene_name": "Dorip1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENESFPRELSLHFGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLVIDLFGNEHDNFTKNLENLMSTIQGSYCSNWHCPTRVQEDQQRTISINPPQEIPHGNLIRLAVDELFCSKIELCEERGCGGLREFSQRVFCHGAPPFVVLNMQHWKPEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 310 }, "evidence": [ { "id": "F1SIN4", "url": "https://omabrowser.org/oma/group/F1SIN4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q4W4Y0-1", "protein_name": "Dopamine receptor-interacting protein 1", "gene_name": "DORIP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKTLFEEIKASIKNNYNQDRSFCRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENENFPRELSLHFGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLIIDLFGNEHDNFTKNLENLMSTIQESYCSNWRCPTRVQEDQQRTININPPQEIPHGNLIRLAVNELFCSKIELCEEHGCGGLREFSQRIFCHGAPPFVVLNMQHWKSEDLAYVPYYLDLSDHKYLLEGATLFNKEEHHYSAAFQIGGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK", "length": 310 }, "evidence": [ { "id": "F1SIN4", "url": "https://omabrowser.org/oma/group/F1SIN4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "NMDA selective glutamate receptor signaling pathway", "id": "GO:0098989", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098989", "evidence": [ { "database": "UniProtKB", "id": "F1SIN4", "url": "https://www.uniprot.org/uniprotkb/F1SIN4" } ], "pmid": "" }, { "name": "G protein-coupled dopamine receptor signaling pathway", "id": "GO:0007212", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007212", "evidence": [ { "database": "UniProtKB", "id": "F1SIN4", "url": "https://www.uniprot.org/uniprotkb/F1SIN4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 138, "end_pos": 140, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 138, "end_pos": 140 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SIP8-1", "uniprot_ac": "F1SIP8", "uniprot_id": "F1SIP8_PIG", "mass": { "chemical_mass": 63071.0, "monoisotopic_mass": 63071.0 }, "refseq": { "ac": "XP_001926627", "name": "F-box only protein 33", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926627" }, "gene_names": [ { "name": "FBXO33", "type": "recommended", "evidence": [ { "id": "F1SIP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIP8" } ] }, { "name": "FBXO33", "type": "synonym", "evidence": [ { "id": "XP_001926627", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926627" } ] } ], "protein_names": [ { "name": "F-box only protein 33", "type": "synonym", "evidence": [ { "id": "XP_001926627", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926627" } ] }, { "name": "F-box protein 33", "type": "synonym", "evidence": [ { "id": "F1SIP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIP8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SIP8", "url": "https://www.uniprot.org/uniprotkb/F1SIP8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FBXO33", "url": "https://www.uniprot.org/uniprotkb/F1SIP8", "locus": { "chromosome": "1", "start_pos": 169877197, "end_pos": 169915798, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004989", "url": "https://www.ensembl.org/id/ENSSSCG00000004989" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004989", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004989", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22104", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22104", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157705", "url": "https://www.ncbi.nlm.nih.gov/gene/100157705", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157705", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157705", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NSRQMKW", "url": "https://omabrowser.org/oma/group/NSRQMKW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SIP8", "url": "https://www.orthodb.org/?gene=F1SIP8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR20933", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20933", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20933:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20933:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12937", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12937", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001926627", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926627", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FM85", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FM85-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FM85-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIP8", "url": "https://www.uniprot.org/uniprotkb/F1SIP8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIP8-1", "url": "https://www.uniprot.org/uniprotkb/F1SIP8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLFLSVPQPRPPGAGTRAGAARVARWRRRRLRLQQLRRLRGLLRGLRRRPGTGSRRRGRMALCGQAAGAASLPSELIVHIFSFLSASDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGSADTGTGGEEVEALQLSSRWLEVLRTYLELVLCVLVSIRNNRNLQKFSLFGDISVLQQQGSLSNTYLSKVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNAIANTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDNNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHWKALSRKSTNLRVYMMAFDIKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDKFLSHFILMNDVIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEPNRHFYREMQSFSEDI", "length": 558, "header": "tr|F1SIP8-1|F1SIP8_PIG Isoform 1 of F-box protein 33 OS=Sus scrofa OX=9823 GN=FBXO33 PE=4 SV=1 CANONICAL=F1SIP8-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FM85-1", "url": "https://www.uniprot.org/uniprotkb/F1SIP8/entry#A0A8W4FM85-1", "sequence": { "sequence": "MLLFLSVPQPRPPGAGTRAGAARVARWRRRRLRLQQLRRLRGLLRGLRRRPGTGSRRRGRMALCGQAAGAASLPSELIVHIFSFLSASDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGSADTGTGGEEVEALQLSSRWLEVLRTYLELVLCVLVSIRNNRLHSVGTQPHRHCSSSWL", "length": 220, "header": "tr|A0A8W4FM85-1|A0A8W4FM85_PIG Computationally mapped isoform of F-box protein 33 OS=Sus scrofa OX=9823 GN=FBXO33 PE=4 SV=1 CANONICAL=F1SIP8-1" }, "locus": { "chromosome": "1", "start_pos": 169915599, "end_pos": 169879207, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100585.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100585.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080460.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080460.1" } ] } }, { "isoform_ac": "F1SIP8-1", "url": "https://www.uniprot.org/uniprotkb/F1SIP8/entry#F1SIP8-1", "sequence": { "sequence": "MLLFLSVPQPRPPGAGTRAGAARVARWRRRRLRLQQLRRLRGLLRGLRRRPGTGSRRRGRMALCGQAAGAASLPSELIVHIFSFLSASDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGSADTGTGGEEVEALQLSSRWLEVLRTYLELVLCVLVSIRNNRNLQKFSLFGDISVLQQQGSLSNTYLSKVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNAIANTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDNNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHWKALSRKSTNLRVYMMAFDIKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDKFLSHFILMNDVIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEPNRHFYREMQSFSEDI", "length": 558, "header": "tr|F1SIP8-1|F1SIP8_PIG Isoform 1 of F-box protein 33 OS=Sus scrofa OX=9823 GN=FBXO33 PE=4 SV=1 CANONICAL=F1SIP8-1" }, "locus": { "chromosome": "1", "start_pos": 169915599, "end_pos": 169878990, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005503.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005503.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005366.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005366.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIP8", "url": "https://www.uniprot.org/uniprotkb/F1SIP8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157705", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157705", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6ADZ5-1", "protein_name": "F-box protein 33", "gene_name": "Fbxo33", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLFLSVPQPRPPGARTRAGAARVVRWRRRQRLRLRQLRRLRGLLRGLRGRSGTSGRRRSRMALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGGSGGGTDTGNGGEESEALQLSSRWLEVLRIYLELVLCVLLSIRNNRNLQKFSLFGDISVVQQQGSLSSTYLSRVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPSSLSSLSNSIANTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNASVMLKSLDNMPNDEHWKALSRKSSSLRVYLMAFDVKSEDMLKILKPSIPLERVHFDSYVTCVSGAIVDLISRQYDKFLTHFILMNDMIDTSGFPDLSDNRNEDPLVLLAWRCTKLTLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLLEQVSLGLGQSWHAVLDIESLSVFTEPNRHFYREMQSFSEDI", "length": 563 }, "evidence": [ { "id": "F1SIP8", "url": "https://omabrowser.org/oma/group/F1SIP8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58HQS1-1", "protein_name": "F-box only protein 33 isoform X1", "gene_name": "fbxo33", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MIAQLFVFTQRSKQGGEEKRRGTELCNDRDKLRASAVCTRWRECLFYPALWTELKLRIGGGTNGGGSGSDQTPRLEFLMRKFGSFVRELQLEFAPVNNYLSPLQHGVDAVESDPQFAKDAMVTYLDQVLCVLGSLRNNRNLQKLSLYGDTCILHEDGILDSTYLSQVDQGGKKMKEIQQLFEEILSNSRQMKWLSCAFMLGVVTPCSLASLSNPSSSSLQHLSLIDNQLPSLISTLELERLAHLHSLSLDFCDFTSDMCRLLACGDRAPLHRLSLLLNGAALDVKPLDGTAAEDDWKALVRRSTNLRVYIMGMDVHSQDLLRVLKPSVPLERIHLDSYSTLVTDGVIELISQQYHKTLTHFILMRDDAGFPDLSVNRNEDPLVLLTWRCLHLAVLIIHGYTVWSHNLVAISRLRGSNLKVLEVSEESIDFDPDQSVYIEGDPVHNLVKEVSLGLGRVWHPSMDNSVVLNEPTQHFHREMQSFSAGM", "length": 486 }, "evidence": [ { "id": "F1SIP8", "url": "https://omabrowser.org/oma/group/F1SIP8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E1BJA6-1", "protein_name": "F-box protein 33", "gene_name": "FBXO33", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRGLRGRPGTGSRRRGRMALCGQAAGAASLPSELIVHIFSFLSASDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGGGGPGDGGGSADAGTGGEEVEALQLSTRWLEVLRTYLELVLCVLVSIRNNRNLQKFSLFGDISVLQQQGSLSNTYLSKVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNSIANTMEHLSLLDNNTPGSSTLITAAELERFVNLRSLALDFCDFTAEMARVLTDNNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHWKALSRKSTSLRVYIMAFDMKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDKFLTHFILMNDMIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEPNRHFYREMQSFSEDV", "length": 560 }, "evidence": [ { "id": "F1SIP8", "url": "https://omabrowser.org/oma/group/F1SIP8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NBR9-1", "protein_name": "F-box protein 33", "gene_name": "FBXO33", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLLFLSQEPQARPGPPPPVAAAAAAGLGPAPGMSVCGEAVGAGSLPSELVVHIFSFLAGPDRLRASAACSHWRECLFYPALWPRLRLSLRVSPAERPRLEFLMRKCGWFVRELRVQFAADNYPSGGPAAGEGAAVAAGDGEAAPLCPRWLELLRTYLELVLCVLSSVRNNRNLQKLSLFGDISILQQHGSISNTYLGKVDPDGKKIKQIQQLFEEILGNSRQLKWLSCGFMLQIVTPTSLSSLSNPIANTMEHLSLLDNHIPGNTTLITAVELERFVNLRSLALDFCDFTAEMARVLADSNHVPLHRLSLLVHSVSIMHKSLDSMPEDENWKALTRNSTNLRVYIMAFDVKSDDMLRILKPSIPLERIHFDSYITCVSGAVVDLISRQYDKFLTHFILMNDVIDMSGFPDLSDNRNEDPLVLLAWRCTRLSLLAVHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGRPWHAVMDIELLSVFTEPTRHFYREMQSFSEGI", "length": 526 }, "evidence": [ { "id": "F1SIP8", "url": "https://omabrowser.org/oma/group/F1SIP8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q7Z6M2-1", "protein_name": "F-box only protein 33", "gene_name": "FBXO33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGPGDGGGADTGTGGEEVEALQLSARWLEVLRTYLELVLCVLVSIRNNRNLQKFSLFGDISVLQQQGSLSNTYLSKVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNAVANTMEHLSLLDNNIPGNSTLITAVELERFVNLHSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHWKALSRKSTSFRVYIMAFDIKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDKFLTHFILMNDVIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEPNRHFYREMQSFSEDI", "length": 555 }, "evidence": [ { "id": "F1SIP8", "url": "https://omabrowser.org/oma/group/F1SIP8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8VE08-1", "protein_name": "F-box only protein 33", "gene_name": "Fbxo33", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLFLSVPQPRPPGARTRAGAARLVRWRRRQRLRLLQLRRLRGLLRGLRRRPGTGGRRPSRMALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGSGGGTDTGTGGEDGEALQLSSRWLEVLRIYLELVLCVLLSIRNNRNLQKFSLFGDISVVHQQGSLSSTYLSRVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNPIANTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNASVMLKSLDNMPNDEHWKALSRKSSSLRVYLMVFDIKSEDMLKILKPSIPLERVHFDSYVTCVSGAIVDLISRQYDKFLTHFILMNDMIDTSGFPDLSDNRNEDPLVLLAWRCTKLTLLAIHGYTVWAHNLIAIARLRGSDLKVLQVTEESIDFDQGELADQDVDPVQNLIEQVSLGLGQSWHAVLDIESLSVFTEPNRHFYREMQSFSEDI", "length": 562 }, "evidence": [ { "id": "F1SIP8", "url": "https://omabrowser.org/oma/group/F1SIP8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of protein ubiquitination", "id": "GO:0031398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031398", "evidence": [ { "database": "UniProtKB", "id": "F1SIP8", "url": "https://www.uniprot.org/uniprotkb/F1SIP8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 296, "end_pos": 298, "annotation": "n_glycosylation_sequon" }, { "start_pos": 346, "end_pos": 348, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SIP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIP8" }, { "id": "PS50181", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50181" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000259", "start_pos": 67, "end_pos": 113, "start_aa": "Ala", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 296, "end_pos": 298 }, { "start_pos": 346, "end_pos": 348 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SIS1-1", "uniprot_ac": "F1SIS1", "uniprot_id": "F1SIS1_PIG", "mass": { "chemical_mass": 79434.0, "monoisotopic_mass": 79434.0 }, "refseq": {}, "gene_names": [ { "name": "LRRC49", "type": "recommended", "evidence": [ { "id": "F1SIS1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIS1" } ] } ], "protein_names": [ { "name": "Leucine-rich repeat-containing protein 49", "type": "recommended", "evidence": [ { "id": "F1SIS1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIS1/entry#names_and_taxonomy" } ] }, { "name": "Tubulin polyglutamylase complex subunit 4", "type": "synonym", "evidence": [ { "id": "F1SIS1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIS1/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Subunit of the tubulin polyglutamylase complex (TPGC). The complex mediates cilia and flagella polyglutamylation which is essential for their biogenesis and motility.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RF13", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF13#function" }, { "database": "UniProtKB", "id": "ARBA00056950", "url": "https://www.uniprot.org/uniprotkb/ARBA00056950#function" }, { "database": "UniProtKB", "id": "F1SIS1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SIS1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LRRC49", "url": "https://www.uniprot.org/uniprotkb/F1SIS1", "locus": { "chromosome": "1", "start_pos": 168700891, "end_pos": 168544421, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004976", "url": "https://www.ensembl.org/id/ENSSSCG00000004976" } ] } } ], "crossref": [ { "id": "F1SIS1", "url": "https://alphafold.ebi.ac.uk/entry/F1SIS1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000004976", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004976", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025875", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025875", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050576", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050576", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45973", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45973", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45973:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45973:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12799", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12799", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14580", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14580", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2RF13", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF13", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RF13-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF13-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIS1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIS1-1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIPGKYRSVSGRAASNVNCGLHLVIQTSSLPEKNKVRFKQVEFRLNKETSSFPGRLLQHDLERNYSSRQGDHINLVSSSMPSFPILQRSSEEKILYSDRLTLERQKLTVCPIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQESWYKHTILQNMMQLRQLDMKRITEEERRMASVVAKKEEEKKRESHKQSLLKEKKRLTINNVARNWDLQQNRITNIAANQERKDSDSQDNSQNDGGTISAFPEETGSLDSGLTSALQGLSVTDTHLVEVDGDTLSLYGSGALECLDRNWSVQTAGMVTTVSFTFIEFDEIVQVLPKLKIKFPNSLHLKFKETNLIMLQQFNALAQLRRVDQLTVDPQGNPVVSFTLWKYYVLFRLSHFSMQKINGTEVTQNDMIMAERLFGILAHVASSELPQYRLISILGDARKKQFRYLLETKGKKPGIASEENNDSKRLVGENTNRATLNYTTRDFYNEKLEEIKEKKKFCKMYIEDLVKEATEINMKNEALQKLWPQMFIELVRDAVIEIRNKNSYMKLCLQQITDQK", "length": 690, "header": "tr|F1SIS1-1|F1SIS1_PIG Isoform 1 of Leucine-rich repeat-containing protein 49 OS=Sus scrofa OX=9823 GN=LRRC49 PE=4 SV=5 CANONICAL=F1SIS1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RF13-1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1/entry#A0A5G2RF13-1", "sequence": { "sequence": "MDCQAEVNCGLHLVIQTSSLPEKNKVEFRLNKETSSFPGRLLQHDLERNYSSRQGDHINLVSSSMPSFPILQRSSEEKILYSDRLTLERQKLTVCPIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQESWYKHTILQNMMQLRQLDMKRITEEERRMASVVAKKEEEKKRESHKQSLLKEKKRLTINNVARNWDLQQNRITNIAANQERKDSDSQDNSQNDGGTISAFPEETGSLDSGLTSALQGLSVTDTHLVEVDGDTLSLYGSGALECLDRNWSVQTAGMVTTVSFTFIEFDEIVQVLPKLKIKFPNSLHLKFKETNLIMLQQFNALAQLRRVDQLTVDPQGNPVVSFTLWKYYVLFRLSHFSMQKINGTEVTQNDMIMAERLFGILAHVASSELPQYRLISILGDARKKQFRYLLETKGKKPGIASEENNDSKRLVGENTNRATLNYTTRDFYNEKLEEIKEKKKFCKMYIEDLVKEATEINMKNEALQKLWPQMFIELVRDAVIEIRNKNSYMKLCLQQITDQK", "length": 675, "header": "tr|A0A5G2RF13-1|A0A5G2RF13_PIG Computationally mapped isoform of Leucine-rich repeat-containing protein 49 OS=Sus scrofa OX=9823 GN=LRRC49 PE=4 SV=1 CANONICAL=F1SIS1-1" }, "locus": { "chromosome": "1", "start_pos": 168699887, "end_pos": 168544421, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079826.2", "url": "https://www.ensembl.org/id/ENSSSCT00000079826.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069532.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069532.1" } ] } }, { "isoform_ac": "F1SIS1-1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1/entry#F1SIS1-1", "sequence": { "sequence": "MIPGKYRSVSGRAASNVNCGLHLVIQTSSLPEKNKVRFKQVEFRLNKETSSFPGRLLQHDLERNYSSRQGDHINLVSSSMPSFPILQRSSEEKILYSDRLTLERQKLTVCPIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQESWYKHTILQNMMQLRQLDMKRITEEERRMASVVAKKEEEKKRESHKQSLLKEKKRLTINNVARNWDLQQNRITNIAANQERKDSDSQDNSQNDGGTISAFPEETGSLDSGLTSALQGLSVTDTHLVEVDGDTLSLYGSGALECLDRNWSVQTAGMVTTVSFTFIEFDEIVQVLPKLKIKFPNSLHLKFKETNLIMLQQFNALAQLRRVDQLTVDPQGNPVVSFTLWKYYVLFRLSHFSMQKINGTEVTQNDMIMAERLFGILAHVASSELPQYRLISILGDARKKQFRYLLETKGKKPGIASEENNDSKRLVGENTNRATLNYTTRDFYNEKLEEIKEKKKFCKMYIEDLVKEATEINMKNEALQKLWPQMFIELVRDAVIEIRNKNSYMKLCLQQITDQK", "length": 690, "header": "tr|F1SIS1-1|F1SIS1_PIG Isoform 1 of Leucine-rich repeat-containing protein 49 OS=Sus scrofa OX=9823 GN=LRRC49 PE=4 SV=5 CANONICAL=F1SIS1-1" }, "locus": { "chromosome": "1", "start_pos": 168699887, "end_pos": 168553648, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005488.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005488.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005351.5", "url": "https://www.ensembl.org/id/ENSSSCP00000005351.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIS1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "F1SIS1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1" } ], "pmid": "" }, { "name": "centriolar satellite", "id": "GO:0034451", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034451", "evidence": [ { "database": "UniProtKB", "id": "F1SIS1", "url": "https://www.uniprot.org/uniprotkb/F1SIS1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 134, "end_pos": 136, "annotation": "n_glycosylation_sequon" }, { "start_pos": 260, "end_pos": 262, "annotation": "n_glycosylation_sequon" }, { "start_pos": 436, "end_pos": 438, "annotation": "n_glycosylation_sequon" }, { "start_pos": 532, "end_pos": 534, "annotation": "n_glycosylation_sequon" }, { "start_pos": 595, "end_pos": 597, "annotation": "n_glycosylation_sequon" }, { "start_pos": 611, "end_pos": 613, "annotation": "n_glycosylation_sequon" }, { "start_pos": 64, "end_pos": 66, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SIS1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 690, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SIS1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SIS1" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 134, "end_pos": 136 }, { "start_pos": 260, "end_pos": 262 }, { "start_pos": 436, "end_pos": 438 }, { "start_pos": 532, "end_pos": 534 }, { "start_pos": 595, "end_pos": 597 }, { "start_pos": 611, "end_pos": 613 }, { "start_pos": 64, "end_pos": 66 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SIT0-1", "uniprot_ac": "F1SIT0", "uniprot_id": "F1SIT0_PIG", "mass": { "chemical_mass": 74582.0, "monoisotopic_mass": 74582.0 }, "refseq": {}, "gene_names": [ { "name": "GTPBP2", "type": "recommended", "evidence": [ { "id": "F1SIT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIT0" } ] } ], "protein_names": [ { "name": "GTP-binding protein 2", "type": "recommended", "evidence": [ { "id": "F1SIT0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIT0/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Involved in the rescue of ribosome stalling due to the presence of non-functional tRNA. Has very low GTP-binding activity.", "evidence": [ { "database": "UniProtKB", "id": "F1SIT0", "url": "https://www.uniprot.org/uniprotkb/F1SIT0#function" }, { "database": "UniProtKB", "id": "ARBA00094357", "url": "https://www.uniprot.org/uniprotkb/ARBA00094357#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SIT0", "url": "https://www.uniprot.org/uniprotkb/F1SIT0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GTPBP2", "url": "https://www.uniprot.org/uniprotkb/F1SIT0", "locus": { "chromosome": "7", "start_pos": 38603474, "end_pos": 38613647, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001689", "url": "https://www.ensembl.org/id/ENSSSCG00000001689" } ] } } ], "crossref": [ { "id": "F1SIT0", "url": "https://alphafold.ebi.ac.uk/entry/F1SIT0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000001689", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001689", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03694", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03694", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd03708", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03708", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd04165", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04165", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000795", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000795", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009000", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009000", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009001", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009001", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035531", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035531", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR43721", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43721", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43721:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43721:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00009", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00009", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-114608", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SIT0", "url": "https://www.uniprot.org/uniprotkb/F1SIT0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIT0-1", "url": "https://www.uniprot.org/uniprotkb/F1SIT0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSPGSGRAAANSFQGALRLEDSISRDASRLFLTRPGSQGRVGAWPVQSPTPLSSWLVGLGGGSRGGGGGGGGGGGGGGGGGRGRAGGWRQQRMDSRVSELFGGCCRPGGGPAVGGTLKARGAGGSSSCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADITVLREREVDYDSDTPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKVDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDVQAIAAGEAQANMAF", "length": 694, "header": "tr|F1SIT0-1|F1SIT0_PIG Isoform 1 of GTP-binding protein 2 OS=Sus scrofa OX=9823 GN=GTPBP2 PE=3 SV=4 CANONICAL=F1SIT0-1" }, "isoforms": [ { "isoform_ac": "F1SIT0-1", "url": "https://www.uniprot.org/uniprotkb/F1SIT0/entry#F1SIT0-1", "sequence": { "sequence": "MSPGSGRAAANSFQGALRLEDSISRDASRLFLTRPGSQGRVGAWPVQSPTPLSSWLVGLGGGSRGGGGGGGGGGGGGGGGGRGRAGGWRQQRMDSRVSELFGGCCRPGGGPAVGGTLKARGAGGSSSCGGPKGKKKNGRNRGGKANNPPYLPPEAEDGNIEYKLKLVNPSQYRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADITVLREREVDYDSDTPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEILGFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKVDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDVQAIAAGEAQANMAF", "length": 694, "header": "tr|F1SIT0-1|F1SIT0_PIG Isoform 1 of GTP-binding protein 2 OS=Sus scrofa OX=9823 GN=GTPBP2 PE=3 SV=4 CANONICAL=F1SIT0-1" }, "locus": { "chromosome": "7", "start_pos": 38613448, "end_pos": 38604596, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017803.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017803.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017322.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017322.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 538, "start_aa": "Thr", "end_pos": 538, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr538", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", 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"MSAGWFRRRFLPGEPLPAPRPPGPHASPVPYRRPRFLRGSSSSPGAADASRRPDSRPVRSPARGRTLPWNAGYAEIINAEKSEFNEDQAACGKLCIRRCEFGAEEEWLTLCPEEFLTGHYWALFDGHGGPAAAILAANTLHSCLRRQLEAVVEGLVATQPPMHLNGRCICPSDPQFVEEKGIRAEDLVIGALESAFQECDEVIGRELEASGQMGGCTALVAVSLQGKLYMANAGDSRAILVRRDEIRPLSFEFTPETERQRIQQLAFVYPELLAGEFTRLEFPRRLKGDDLGQKVLFRDHHMSGWSYKRVEKSDLKYPLIHGQGRQARLLGTLAVSRGLGDHQLRVLDTNIQLKPFLLSVPQVTVLDVDQLELQEDDVVVMATDGLWDVLSNEQVAWLVRSFLPGNQEDPHRFSKLAQMLIHSTQGKEDSLTEEGQVSYDDVSVFVIPLHSQGQESSDH", "length": 459 }, "evidence": [ { "id": "F1SIX8", "url": "https://omabrowser.org/oma/group/F1SIX8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity", "id": "GO:0004741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004741", "evidence": [ { "database": "UniProtKB", "id": "F1SIX8", "url": "https://www.uniprot.org/uniprotkb/F1SIX8" } ], "pmid": "" }, { "name": "protein serine/threonine phosphatase activity", "id": "GO:0004722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004722", "evidence": [ { "database": "UniProtKB", "id": "F1SIX8", "url": "https://www.uniprot.org/uniprotkb/F1SIX8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F1SIX8", "url": "https://www.uniprot.org/uniprotkb/F1SIX8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SIX8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 463, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SIX8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SIX8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SIX8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIX8" }, { "id": "PS51746", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51746" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPM-type phosphatase", "eco_id": "ECO_0000259", "start_pos": 102, "end_pos": 453, "start_aa": "Gly", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ07-1", "uniprot_ac": "F1SJ07", "uniprot_id": "F1SJ07_PIG", "mass": { "chemical_mass": 40067.0, "monoisotopic_mass": 40067.0 }, "refseq": { "ac": "XP_013851548", "name": "pleckstrin", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851548" }, "gene_names": [ { "name": "PLEK", "type": "recommended", "evidence": [ { "id": "F1SJ07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ] }, { "name": "PLEK", "type": "synonym", "evidence": [ { "id": "XP_013851548", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851548" } ] } ], "protein_names": [ { "name": "Pleckstrin", "type": "recommended", "evidence": [ { "id": "F1SJ07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ07/entry#names_and_taxonomy" } ] }, { "name": "pleckstrin", "type": "synonym", "evidence": [ { "id": "XP_013851548", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851548" } ] } ], "function": [ { "annotation": "Major protein kinase C substrate of platelets.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QT56", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QT56#function" }, { "database": "UniProtKB", "id": "ARBA00058231", "url": "https://www.uniprot.org/uniprotkb/ARBA00058231#function" }, { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLEK", "url": "https://www.uniprot.org/uniprotkb/F1SJ07", "locus": { "chromosome": "3", "start_pos": 73877743, "end_pos": 73906667, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008348", "url": "https://www.ensembl.org/id/ENSSSCG00000008348" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008348", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008348", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04445", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04445", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13301", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13301", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13302", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13302", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100516257", "url": "https://www.ncbi.nlm.nih.gov/gene/100516257", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037370", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037370", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037371", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037371", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100516257", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516257", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GTCVIDW", "url": "https://omabrowser.org/oma/group/GTCVIDW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SJ07", "url": "https://www.orthodb.org/?gene=F1SJ07", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12092", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12092", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12092:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12092:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00610", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00610", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-114608", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013851548", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851548", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QT56", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QT56", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QT56-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QT56-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ07-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ07-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPKRIREGYLVKKGSMFNTWKPMWVILLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDGWVRDIKKAIKCIEGGQKFARKSTRRSIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKVFNHCFTGNCVIDWLLSNNSVRNRQEGIMIASSLLNEGYLQPAGDLSKSAVDGTAENPFLDNADAFYYFPDSGFFCEDNSSDDDVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGGEDPLGAIHLRGCVVTSVESNTDGRRSEEENLFEIITADEVHYFLQAANPKERTEWIKAIQVASRTGK", "length": 350, "header": "tr|F1SJ07-1|F1SJ07_PIG Isoform 1 of Pleckstrin OS=Sus scrofa OX=9823 GN=PLEK PE=1 SV=2 CANONICAL=F1SJ07-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QT56-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ07/entry#A0A5G2QT56-1", "sequence": { "sequence": "MCIHFILKLFKKVPAECHSPLPLKAAFLAAWARKCGSPAFTLAKASLLPKSCATDQRALENIKAQLFLLSLQGSMFNTWKPMWVILLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDGWVRDIKKAIKCIEGGQKFARKSTRRSIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKVFNHCFTGNCVIDWLLSNNSVRNRQEGIMIASSLLNEGYLQPAGDLSKSAVDGTAENPFLDNADAFYYFPDSGFFCEDNSSDDDVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGGEDPLGAIHLRGCVVTSVESNTDGRRSEEENLFEIITADEVHYFLQAANPKERTEWIKAIQVASRTGK", "length": 408, "header": "tr|A0A5G2QT56-1|A0A5G2QT56_PIG Computationally mapped isoform of Pleckstrin OS=Sus scrofa OX=9823 GN=PLEK PE=1 SV=1 CANONICAL=F1SJ07-1" }, "locus": { "chromosome": "3", "start_pos": 73895896, "end_pos": 73879338, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085992.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085992.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067331.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067331.1" } ] } }, { "isoform_ac": "F1SJ07-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ07/entry#F1SJ07-1", "sequence": { "sequence": "MEPKRIREGYLVKKGSMFNTWKPMWVILLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDGWVRDIKKAIKCIEGGQKFARKSTRRSIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKVFNHCFTGNCVIDWLLSNNSVRNRQEGIMIASSLLNEGYLQPAGDLSKSAVDGTAENPFLDNADAFYYFPDSGFFCEDNSSDDDVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGGEDPLGAIHLRGCVVTSVESNTDGRRSEEENLFEIITADEVHYFLQAANPKERTEWIKAIQVASRTGK", "length": 350, "header": "tr|F1SJ07-1|F1SJ07_PIG Isoform 1 of Pleckstrin OS=Sus scrofa OX=9823 GN=PLEK PE=1 SV=2 CANONICAL=F1SJ07-1" }, "locus": { "chromosome": "3", "start_pos": 73906364, "end_pos": 73879338, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009142.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009142.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008911.2", "url": "https://www.ensembl.org/id/ENSSSCP00000008911.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516257", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516257", "resource": "KEGG Pathway" }, { "id": "R-SSC-114608", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "resource": "Reactome", "description": "Platelet degranulation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZAT1-1", "protein_name": "Pleckstrin", "gene_name": "PLEK", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "KSRNPLDFSMQGSMFNTWKPMWVVLLEDGIEFYKRKSDNSPKGMIPLKGSTINSPCQDFGKRMFVFKLTAAKQQDHFFQASYLEERDAWVRDIKKAIQCIDGGQRFARKSTRKSIRLPETINLSALYLSMKDPEKGIKELKLEKDKKVFNHCFTGTAVIDWLVSSNSIRNRKEGLMLASSLLNEGYLQPAGDTSKAAAEGLSDTPFLDLSDAYYYFPDSGFFCEGNSSDDDVVLKEEFRGMIVKQGCLLKQGHRRKNWKVRKFVLREDPAYLHYYDPAGGEDPLGAIHLRGCVVTAVEDMPDSKKYDVENNLFEIITASEVHYYLQAASSAERTEWIKAIQSVARTGK", "length": 348 }, "evidence": [ { "id": "F1SJ07", "url": "https://omabrowser.org/oma/group/F1SJ07/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MRZ8-1", "protein_name": "Pleckstrin", "gene_name": "PLEK", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEPKRIREGYLVKKGSMFNSWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSALTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDIKKATKCIEGGQKFARKSTRRSIRLPETIDLSALYLSMKDTEKGVKELNLEKDKKIFNHCFTGNCVIDWLVSNKSVRNRQEGLVIASSLLNEGYLQPAGDLSKNAVDGTAENPFLDNPDAFYYFPDSGFFCEENSSDDDVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGGEDPLGAIRLRGCVVTSVESHPDGKKSEEENLFEIITADEVHYFLQAATPKERIEWIKAIQVASRTGK", "length": 350 }, "evidence": [ { "id": "F1SJ07", "url": "https://omabrowser.org/oma/group/F1SJ07/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P08567-1", "protein_name": "Pleckstrin", "gene_name": "PLEK", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDIKKAIKCIEGGQKFARKSTRRSIRLPETIDLGALYLSMKDTEKGIKELNLEKDKKIFNHCFTGNCVIDWLVSNQSVRNRQEGLMIASSLLNEGYLQPAGDMSKSAVDGTAENPFLDNPDAFYYFPDSGFFCEENSSDDDVILKEEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIRAIQMASRTGK", "length": 350 }, "evidence": [ { "id": "F1SJ07", "url": "https://omabrowser.org/oma/group/F1SJ07/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q4KM33-1", "protein_name": "Pleckstrin", "gene_name": "Plek", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNNPKGMIPLKGSTLTSPCQDFGKRMFVLKITTTKQQDHFFQAAYLEERDAWVRDIKKAIKCIEGGQKFARKSTRRSIRLPETIDLGALYLSMKDPEKGIKELNLEKDKKVFNHCFTGSGVIDWLVSNKLVRNRQEGLMISASLLSEGYLQPASDLSKNAADGIAENPFLDNPDAFYYFPDSGFFCEENSSDDDIILKEEFRGIIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGGEDPLGAIHLRGCVVTSVESNPDGKKSDEENLFEIITADEVHYYMQAATAKERTEWIKAIQVASRTGK", "length": 350 }, "evidence": [ { "id": "F1SJ07", "url": "https://omabrowser.org/oma/group/F1SJ07/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9JHK5-1", "protein_name": "Pleckstrin", "gene_name": "Plek", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPKRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVLKITTTKQQDHFFQAAFLEERDAWVRDIKKAIKCIEGGQKFARKSTRRSIRLPETIDLGALYLSMKDPEKGIKELNLEKDKKVFNHCLTGSGVIDWLVSNKLVRNRQEGLMISASLLSEGYLQPAGDLSKNAADGIAENPFLDSPDAFYYFPDSGFFCEENSSDDDVILREEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGGEDPLGAVHLRGCVVTSVESSHDVKKSDEENLFEIITADEVHYYLQAATSKERTEWIKAIQVASRTGK", "length": 350 }, "evidence": [ { "id": "F1SJ07", "url": "https://omabrowser.org/oma/group/F1SJ07/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 16, "go_terms": [ { "name": "platelet degranulation", "id": "GO:0002576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002576", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "actin cytoskeleton organization", "id": "GO:0030036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030036", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "thrombin-activated receptor signaling pathway", "id": "GO:0070493", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070493", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "positive regulation of actin filament depolymerization", "id": "GO:0030836", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030836", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "positive regulation of cellular component biogenesis", "id": "GO:0044089", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044089", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "positive regulation of actin filament bundle assembly", "id": "GO:0032233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032233", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "integrin-mediated signaling pathway", "id": "GO:0007229", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007229", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "cortical actin cytoskeleton organization", "id": "GO:0030866", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030866", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "ruffle organization", "id": "GO:0031529", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031529", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "hematopoietic progenitor cell differentiation", "id": "GO:0002244", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002244", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "negative regulation of inositol phosphate biosynthetic process", "id": "GO:0010920", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010920", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "phospholipase C-inhibiting G protein-coupled receptor signaling pathway", "id": "GO:0030845", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030845", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "regulation of cell diameter", "id": "GO:0060305", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060305", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "inositol phosphate metabolic process", "id": "GO:0043647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043647", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "negative regulation of thrombin-activated receptor signaling pathway", "id": "GO:0070495", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070495", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "ruffle membrane", "id": "GO:0032587", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032587", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "phosphatidylinositol-3,4-bisphosphate binding", "id": "GO:0043325", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043325", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "protein kinase C binding", "id": "GO:0005080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005080", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" }, { "name": "phosphatase activator activity", "id": "GO:0019211", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019211", "evidence": [ { "database": "UniProtKB", "id": "F1SJ07", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 168, "end_pos": 170, "annotation": "n_glycosylation_sequon" }, { "start_pos": 229, "end_pos": 231, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SJ07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" }, { "id": "PS50186", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50186" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DEP", "eco_id": "ECO_0000259", "start_pos": 136, "end_pos": 221, "start_aa": "Thr", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SJ07", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ07" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 4, "end_pos": 101, "start_aa": "Lys", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": 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"sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ09-1", "uniprot_ac": "F1SJ09", "uniprot_id": "F1SJ09_PIG", "mass": { "chemical_mass": 54991.0, "monoisotopic_mass": 54991.0 }, "refseq": { "ac": "XP_013843703", "name": "protein LMBR1L isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843703" }, "gene_names": [ { "name": "LMBR1L", "type": "recommended", "evidence": [ { "id": "F1SJ09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ] }, { "name": "LMBR1L", "type": "synonym", "evidence": [ { "id": 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"start_pos": 15121554, "end_pos": 15135252, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000189", "url": "https://www.ensembl.org/id/ENSSSCG00000000189" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000189", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000189", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525991", "url": "https://www.ncbi.nlm.nih.gov/gene/100525991", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006876", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006876", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008075", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008075", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525991", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525991", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SJ09", "url": 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"Protein" ] }, { "id": "A0A5G2R7J2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7J2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7J2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7J2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1TRK3", "url": "https://www.uniprot.org/uniprotkb/A0A8D1TRK3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1TRK3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1TRK3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ09-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ09-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEAADYEVLSVREQLFHERVRECIISTLLFATLYILCHIALTRFKKPAEFTTVDDEDATVNKIALELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLARVYETVVMLILLTLLVLGMVWVASAIVDNDKASRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLHCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLILTGLSVLIVAIHILELLIDEAAMPRGMQGASLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSPLFRGLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFPRASRKTQHQ", "length": 489, "header": "tr|F1SJ09-1|F1SJ09_PIG Isoform 1 of Limb development membrane protein 1 like OS=Sus scrofa OX=9823 GN=LMBR1L PE=3 SV=1 CANONICAL=F1SJ09-1" }, "isoforms": [ { "isoform_ac": "A0A286ZW66-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ09/entry#A0A286ZW66-1", "sequence": { "sequence": "MEAADYEVLSVREQLFHERVRECIISTLLFATLYILCHIALTRFKKPAEFTTVDDEDATVNKIALELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLARVYETVVMLILLTLLVLGMVWVASAIVDNDKASRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLHCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLILTGLSVLIVAIHILELLIDEAAMPRGMQGASLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSPLFRGLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGEREWGRGWWGGRTVEPSGTVVIPKQGSWHALCLVWLDRLPLPVSGFPRASRKTQHQ", "length": 524, "header": "tr|A0A286ZW66-1|A0A286ZW66_PIG Computationally mapped isoform of Limb development membrane protein 1 like OS=Sus scrofa OX=9823 GN=LMBR1L PE=3 SV=1 CANONICAL=F1SJ09-1" }, "locus": { "chromosome": "5", "start_pos": 15134900, "end_pos": 15122090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050999.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050999.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035697.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035697.2" } ] } }, { "isoform_ac": "A0A5G2R7J2-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ09/entry#A0A5G2R7J2-1", "sequence": { "sequence": "MEAADYEVLSVREQLFHERVRECIISTLLFATLYILCHIALTRFKKPAEFTTVDDEDATVNKIALELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLARVYETVVMLILLTLLVLGMVWVASAIVDNDKASRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLHCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLILTGLSVLIVAIHILELLIDEAAMPRGMQGASLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSPLFRGLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLASTFTSFSQWRSTTLPQIFLWGGSSNKHSNFIF", "length": 446, "header": "tr|A0A5G2R7J2-1|A0A5G2R7J2_PIG Computationally mapped isoform of Limb development membrane protein 1 like OS=Sus scrofa OX=9823 GN=LMBR1L PE=3 SV=1 CANONICAL=F1SJ09-1" }, "locus": { "chromosome": "5", "start_pos": 15134900, "end_pos": 15123210, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074724.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074724.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072316.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072316.1" } ] } }, { "isoform_ac": "A0A8D1TRK3-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ09/entry#A0A8D1TRK3-1", "sequence": { "sequence": "MEAADYEVLSVREQLFHERVRECIISTLLFATLYILCHIALTRFKKPAEFTTVDDEDATVNKIALELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLARVYETVVMLILLTLLVLGMVWVASAIVDNDKASRESLYVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLHCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLILTGLSVLIVAIHILELLIDEAAMPRGMQGASLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSPLFRGLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFPRASRKTQHQ", "length": 466, "header": "tr|A0A8D1TRK3-1|A0A8D1TRK3_PIG Computationally mapped isoform of Limb development membrane protein 1 like OS=Sus scrofa OX=9823 GN=LMBR1L PE=3 SV=1 CANONICAL=F1SJ09-1" }, "locus": { "chromosome": "5", "start_pos": 15134900, "end_pos": 15122090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048063.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048063.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036825.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036825.2" } ] } }, { "isoform_ac": "F1SJ09-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ09/entry#F1SJ09-1", "sequence": { "sequence": "MEAADYEVLSVREQLFHERVRECIISTLLFATLYILCHIALTRFKKPAEFTTVDDEDATVNKIALELCTFTLAVALGAVLLLPFSIISNEVLLSLPRNYYIQWLNGSLIHGLWNLVFLFSNLSLIFLMPFAYFFTESEGFAGSRKGVLARVYETVVMLILLTLLVLGMVWVASAIVDNDKASRESLYDFWEYYLPYLYSCISFLGVLLLLVCTPLGLARMFSVTGKLLVKPRLLEDLEEQLHCSAFEEAALTRRICNPTSCWLPLDMELLHRQVLALQTQRVLLEKRRKASAWQRNLGYPLAMLCLLILTGLSVLIVAIHILELLIDEAAMPRGMQGASLGQVSFSKLGSFGAVIQVVLIFYLMVSSVVGFYSSPLFRGLRPRWHDTAMTQIIGNCVCLLVLSSALPVFSRTLGLTRFDLLGDFGRFNWLGNFYIVFLYNAAFAGLTTLCLVKTFTAAVRAELIRAFGLDRLPLPVSGFPRASRKTQHQ", "length": 489, "header": "tr|F1SJ09-1|F1SJ09_PIG Isoform 1 of Limb development membrane protein 1 like OS=Sus scrofa OX=9823 GN=LMBR1L PE=3 SV=1 CANONICAL=F1SJ09-1" }, "locus": { "chromosome": "5", "start_pos": 15134900, "end_pos": 15122090, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000200.3", "url": "https://www.ensembl.org/id/ENSSSCT00000000200.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000198.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000198.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525991", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525991", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transmembrane signaling receptor activity", "id": "GO:0004888", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004888", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 9, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "receptor-mediated endocytosis", "id": "GO:0006898", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006898", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "Wnt signaling pathway", "id": "GO:0016055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016055", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "negative regulation of canonical Wnt signaling pathway", "id": "GO:0090090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090090", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "hematopoietic stem cell differentiation", "id": "GO:0060218", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060218", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "T cell apoptotic process", "id": "GO:0070231", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070231", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "T cell differentiation", "id": "GO:0030217", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030217", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "T cell proliferation", "id": "GO:0042098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042098", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" }, { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F1SJ09", "url": "https://www.uniprot.org/uniprotkb/F1SJ09" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 105, "end_pos": 107, "annotation": "n_glycosylation_sequon" }, { "start_pos": 121, "end_pos": 123, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 105, "end_pos": 107 }, { "start_pos": 121, "end_pos": 123 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ13-1", "uniprot_ac": "F1SJ13", "uniprot_id": "F1SJ13_PIG", "mass": { "chemical_mass": 75472.0, "monoisotopic_mass": 75472.0 }, "refseq": { "ac": "XP_003126149", "name": "dendrin isoform X2", "summary": "", "url": 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"https://www.uniprot.org/uniprotkb/F1SJ13" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DDN", "url": "https://www.uniprot.org/uniprotkb/F1SJ13", "locus": { "chromosome": "5", "start_pos": 15026080, "end_pos": 15029632, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000184", "url": "https://www.ensembl.org/id/ENSSSCG00000000184" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000184", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000184", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525642", "url": "https://www.ncbi.nlm.nih.gov/gene/100525642", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026500", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026500", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525642", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525642", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TPQGNRE", "url": "https://omabrowser.org/oma/group/TPQGNRE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SJ13", "url": "https://www.orthodb.org/?gene=F1SJ13", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16757", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16757", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16757:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16757:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15498", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15498", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003126149", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126149", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SJ13", "url": "https://www.uniprot.org/uniprotkb/F1SJ13", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ13-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ13-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLDGQLFSEGPDSPRELQDEESSSCLWVQKSKLLVIEVKTISCHYSRRAPPRQLMDFQASHWARWPQSRTCGPRPGSPEPPPRRPWASRVLQEATNWRAGPPAEARAREQEKRKAASQEREAKETERKRRKAGGARRSPPGRPRPEPRNAPRVAQLAGLPASSRPERLGSVGRPSRPFAPSAQPQSNPGAAWAGPWGGRRPGPPSYEAHLLLRGAAGMAPRRRWDRPPPYVAPPSYEGPHRTLGTKRGAEPSQAPASSAPAPARTEGVCTKKRLDPRIYRDVLGAWGLRQGRGLLGGSPGCGTGRPRLESGKGAAEKSLRPAAAGLKSGSDRHPQAKAAGSPGAETLPAGSATVTPSPPRPAPRSRPHPTGSGEGREGREQSWLPKCWIPSVKKQLPRHSQTLPRPWAPGGTGWRESLGHREEAGPETLEGWKATRRPHTLPRSSRGRARGEGVFVIDATCVVIRSQYVPTPRTQHVQLLPAGVPRAVEDAPSPPKSNKEEGEGATVFPSPSQKLPLSSRPSHQPGGGRGLEAEGGKPADSSLEERASRILGLPVGEVNLQDPPTQPGSPEHSALGPAPSGGAGGAERSEEVAAVPQRAGRGWARTPGPYAGALREAVSRIRRHTAPDSDSDEAAELSVHSGSSDGSDTEASGASWRSERTGPREGGKTAELSDNVRGILDVISRTEEVLFGAGDNKGTPQGNRERQ", "length": 707, "header": "tr|F1SJ13-1|F1SJ13_PIG Isoform 1 of Dendrin OS=Sus scrofa OX=9823 GN=DDN PE=4 SV=1 CANONICAL=F1SJ13-1" }, "isoforms": [ { "isoform_ac": "F1SJ13-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ13/entry#F1SJ13-1", "sequence": { "sequence": "MLDGQLFSEGPDSPRELQDEESSSCLWVQKSKLLVIEVKTISCHYSRRAPPRQLMDFQASHWARWPQSRTCGPRPGSPEPPPRRPWASRVLQEATNWRAGPPAEARAREQEKRKAASQEREAKETERKRRKAGGARRSPPGRPRPEPRNAPRVAQLAGLPASSRPERLGSVGRPSRPFAPSAQPQSNPGAAWAGPWGGRRPGPPSYEAHLLLRGAAGMAPRRRWDRPPPYVAPPSYEGPHRTLGTKRGAEPSQAPASSAPAPARTEGVCTKKRLDPRIYRDVLGAWGLRQGRGLLGGSPGCGTGRPRLESGKGAAEKSLRPAAAGLKSGSDRHPQAKAAGSPGAETLPAGSATVTPSPPRPAPRSRPHPTGSGEGREGREQSWLPKCWIPSVKKQLPRHSQTLPRPWAPGGTGWRESLGHREEAGPETLEGWKATRRPHTLPRSSRGRARGEGVFVIDATCVVIRSQYVPTPRTQHVQLLPAGVPRAVEDAPSPPKSNKEEGEGATVFPSPSQKLPLSSRPSHQPGGGRGLEAEGGKPADSSLEERASRILGLPVGEVNLQDPPTQPGSPEHSALGPAPSGGAGGAERSEEVAAVPQRAGRGWARTPGPYAGALREAVSRIRRHTAPDSDSDEAAELSVHSGSSDGSDTEASGASWRSERTGPREGGKTAELSDNVRGILDVISRTEEVLFGAGDNKGTPQGNRERQ", "length": 707, "header": "tr|F1SJ13-1|F1SJ13_PIG Isoform 1 of Dendrin OS=Sus scrofa OX=9823 GN=DDN PE=4 SV=1 CANONICAL=F1SJ13-1" }, "locus": { "chromosome": "5", "start_pos": 15029611, "end_pos": 15027084, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000194.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000194.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000192.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000192.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 355, "start_aa": "Thr", "end_pos": 355, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr355", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ13", "url": "https://www.uniprot.org/uniprotkb/F1SJ13" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525642", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525642", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "O94850-1", "protein_name": "Dendrin", "gene_name": "DDN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLDGPLFSEGPDSPRELQDEESGSCLWVQKSKLLVIEVKTISCHYSRRAPSRQPMDFQASHWARGFQNRTCGPRPGSPQPPPRRPWASRVLQEATNWRAGPLAEVRAREQEKRKAASQEREAKETERKRRKAGGARRSPPGRPRPEPRNAPRVAQLAGLPAPLRPERLAPVGRAPRPSAQPQSDPGSAWAGPWGGRRPGPPSYEAHLLLRGSAGTAPRRRWDRPPPYVAPPSYEGPHRTLGTKRGPGNSQVPTSSAPAATPARTDGGRTKKRLDPRIYRDVLGAWGLRQGQGLLGGSPGCGAARARPEPGKGVVEKSLGLAAADLNSGSDSHPQAKATGSAGTEIAPAGSATAAPCAPHPAPRSRHHLKGSREGKEGEQIWFPKCWIPSPKKQPPRHSQTLPRPWAPGGTGWRESLGLGEGAGPETLEGWKATRRAHTLPRSSQGLSRGEGVFVIDATCVVIRSQYVPTPRTQQVQLLPSGVTRVVGDSPSQSKPGKEEGEGATVFPSPCQKRLSSSRLLHQPGGGRGGEAEGGRPGDSTLEERTFRILGLPAPEVNLRDAPTQPGSPEHQALGPAASGAQGRAEGSEVAVVQRRAGRGWARTPGPYAGALREAVSRIRRHTAPDSDTDEAEELSVHSGSSDGSDTEAPGASWRNERTLPEVGNSSPEEDGKTAELSDSVGEILDVISQTEEVLFGVRDIRGTQQGNRKRQ", "length": 711 }, "evidence": [ { "id": "F1SJ13", "url": "https://omabrowser.org/oma/group/F1SJ13/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P50617-1", "protein_name": "Dendrin", "gene_name": "Ddn", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLDGPLFSEGPDSPRELQDEESGSCLWVQKSKLLVIEVKTISCHYSRRAASRQSMDIQASYWARGPQNRTCRLRPGSPEPPPRRPWASRVLQEATNWRAGPPAEVRAREQEKRKAASQEREAKETERKRRKAGGARRSPLGQPRPELRNALRAAQPTGFPVFSRPERFGQVGRAPRPSALPQGDPGVAWAGPWGGRRPGPPSYEAHLLLRGAAGTAPRRRWDRPPPYVAPPSYEGPHRTLGTKRGPELSRAPTSSAPVPATTRTEGGRTKKRLDPRIYRDVLGAWGLRQGRGLLGGAPGCAAARARPESCKGAVEKSSGLAAAGLNSGGDGHSQAKTTGPVTEVALSGSTISSPPRPVPRSRQHLRGSRKGKEGSEEMWLPTCWLSSPKKPPVRHSQTLPRPWAPGGTGWKESLGQREGTEHETLEVWKVTRRAHTLPRSSRGPAGREGIFVIDATCVVIKSQYVPTPRTQQRQLAPSGESCIVSDSLRQPKPCLEEEGKGAAANPSVCQKRLLSSRVLNPPSEGREFEAEGRQQGDSSLEERSSSGLGFPVGEVNPRDAPTHPGSPEHSTLGPAAPGCAGSVKGPEAAGVPRRAGGGWARTPGPYAGALREAVSRIRRHTAPDSDSDEAEDLSAHSGSSDGSDTDAPGASWRNERTLPAVGNTRPREGGKTAELGDSIGEILDVISQTEEGLVREDTRKTPQGKRE", "length": 707 }, "evidence": [ { "id": "F1SJ13", "url": "https://omabrowser.org/oma/group/F1SJ13/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80TS7-1", "protein_name": "Dendrin", "gene_name": "Ddn", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLDGPLFSEGPDSPRELQDEESGSCLWVQKSKLLVIEVKTISCHYSRRAPSRQSMDIQASYWARGPQSRTCRLRPGSPEPPPRRPWASRVLQEATNWRAGPPAEVRAREQEKRKAASQEREAKETERKRRKAGGARRSPLGQPRPEPRNALRAAQPTGFPVFSRPERFGQVGRAPRPSVLPQGDPGVAWAGPWGGRRPGPPSYEAHLLLRGSAGTAPRRRWDRPPPYVAPPSYEGPHRTLGTKRGPELSRAPTSSAPVPATTRTEGGRTKKRLDPRIYRDVLGAWGLRQGRGLLGGAPGCTAARARPESCKGAIEKSSGLVAAGLNSAGDSHSQGKTTGGPGTDAALSRSAISSPPRPVPRSRQHLRGSRKGKEGSEQIWLPTCWLASPKKPPVRHSQTLPRPWAPGGTGWKESLGQREGAEHETLEVWKVTRRAHTLPRISRGPAGREGIFVIDATCVVIKSQYVPTPRTQQGQLVPSGESCSVSDSLSQPKPCHEEEGEGAAANPSVCQKRLLSSRVLNQPSEGRECEAEVGQQGDSSLEERSSSGLGFPVGEVNPRDAPTQPGSQEHPTLGPAAPVCAGSLKGSEAAGVPRRAGGGWARTPGPYAGALREAVSRIRRHTAPDSDSDEAEDLSVHSGSSDGSDTDAPGASWRNERTLPALGNTRPREGGKTAGLSDSIREIVDVISQTEEGFIREDTRKTPQGNRERE", "length": 710 }, "evidence": [ { "id": "F1SJ13", "url": "https://omabrowser.org/oma/group/F1SJ13/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SJ13", "url": "https://www.uniprot.org/uniprotkb/F1SJ13" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SJ13", "url": "https://www.uniprot.org/uniprotkb/F1SJ13" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SJ13", "url": "https://www.uniprot.org/uniprotkb/F1SJ13" } ], "pmid": "" }, { "name": "cell projection", "id": "GO:0042995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042995", "evidence": [ { "database": "UniProtKB", "id": "F1SJ13", "url": "https://www.uniprot.org/uniprotkb/F1SJ13" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 355 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ20-1", "uniprot_ac": "F1SJ20", "uniprot_id": "F1SJ20_PIG", "mass": { "chemical_mass": 35134.0, "monoisotopic_mass": 35134.0 }, "refseq": {}, "gene_names": [ { "name": "TMEM115", "type": "recommended", "evidence": [ { "id": "F1SJ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ20" } ] } ], "protein_names": [ { "name": "Transmembrane protein 115", "type": "synonym", "evidence": [ { "id": "F1SJ20", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ20/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJ20", "url": "https://www.uniprot.org/uniprotkb/F1SJ20" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM115", "url": "https://www.uniprot.org/uniprotkb/F1SJ20", "locus": { "chromosome": "13", "start_pos": 32837667, "end_pos": 32842959, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000043195", "url": "https://www.ensembl.org/id/ENSSSCG00000043195" } ] } } ], "crossref": [ { "id": "F1SJ20", "url": "https://alphafold.ebi.ac.uk/entry/F1SJ20", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000043195", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000043195", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013861", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013861", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035952", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035952", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR13377", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13377", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13377:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13377:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08551", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08551", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6807878", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807878", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SJ20", "url": "https://www.uniprot.org/uniprotkb/F1SJ20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ20-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ20-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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Transmembrane protein 115 OS=Sus scrofa OX=9823 GN=TMEM115 PE=4 SV=2 CANONICAL=F1SJ20-1" }, "locus": { "chromosome": "13", "start_pos": 32842383, "end_pos": 32838286, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069922.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069922.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072333.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072333.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 48, "start_aa": "Thr", "end_pos": 48, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr48", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ54-1", "uniprot_ac": "F1SJ54", "uniprot_id": "F1SJ54_PIG", "mass": { "chemical_mass": 98519.0, "monoisotopic_mass": 98519.0 }, "refseq": { "ac": "XP_020954695", "name": "uncharacterized protein C15orf39 homolog isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954695" }, "gene_names": [ { "name": "C15orf39", "type": "recommended", "evidence": [ { "id": "F1SJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ54" } ] }, { "name": "C7H15orf39", "type": "synonym", "evidence": [ { "id": "XP_020954695", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954695" } ] } ], "protein_names": [ { "name": "Chromosome 7 C15orf39 homolog", "type": "synonym", "evidence": [ { "id": "F1SJ54", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ54/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C15orf39 homolog isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020954695", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954695" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJ54", "url": "https://www.uniprot.org/uniprotkb/F1SJ54" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C15orf39", "url": "https://www.uniprot.org/uniprotkb/F1SJ54", "locus": { "chromosome": "7", "start_pos": 58381034, "end_pos": 58386366, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001885", "url": "https://www.ensembl.org/id/ENSSSCG00000001885" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001885", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001885", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154113", "url": "https://www.ncbi.nlm.nih.gov/gene/100154113", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR037656", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037656", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "DTYSYPS", "url": "https://omabrowser.org/oma/group/DTYSYPS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR28422", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28422", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28422:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28422:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF17663", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17663", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020954695", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954695", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SJ54", "url": "https://www.uniprot.org/uniprotkb/F1SJ54", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ54-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ54-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEKRPLGTLGPVMYGKLPRLEADSGPGHSLPPSSGNQDPCSYKGAYFSCPMGGPPKAGSERLASWTPYPPLYPTSVAGPPLRPDNLLTSCLLYRPPTESSEKVQDSGPVELLPFSPQAHSYPGPPLAAPKPVYRNPLCYGLPTCLGEGAAKRPLDVDWTLVTGSLLPPADPSCSLPPAPGKGPSLDGTFLRGVSAGTSGKDSTVSFSPCQAFLEKYRTIHSTGFLASKYAGPYSGDPKQALSEGPPSPWTQLAQPLGPACQDAVPTHYPLPHPTQALPCPTACRHPEKQGGYGSVLALQPLGAPKMAGYPAGGLSSPYLRQQAAQAPYMPPVGLDTYSYPSAPLPAPSPGLKLEPPLAPRCPLDFAPQPLGFPYPRDDLALYGVSPRLGGTPPSQSSVQPVPQPGAFQRACQPLPASQPCSEPARPAEKPGQEADEKMWLPSCRKEPVQPQLDEHPGAPIVIGDSPVPRTPPALPPCAQERPSLPPNEGTLPPSSPPMPIIDNVFSLAPYRDYLDAQAPEATAEPDPAPAPSESQDRDCRGSLPAQEAPSRVHSSLKEEVALDLSVKKAAAEALPIKVPCPAGHVKPTAAVDVPGVGNTVSDVPNVGDTVSDLQSLKKMVTEVPEVPRVPVTTEATPRTNFHSSVAFMFRKFKILRPAPLPAAMVPAMVPAVPTSAPTPAQPAPPHTPVPAGLKILSQPLPMACFNLALPSPPAVAVASPASAPAPAPSPAPAPALTPAPASVPAPAPVTGPDPASPTTADAQEQQFAGLHASLCDAISGSVAHSPPEKLREWLETSGPAGRAAWQDCQGVQGLLGKLLSQLQSFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERALRERALHGCTSRMLKLLALRQLPDIYPDLLGLQWRDCVRRQLGEHGAASVATGAV", "length": 939, "header": "tr|F1SJ54-1|F1SJ54_PIG Isoform 1 of Chromosome 7 C15orf39 homolog OS=Sus scrofa OX=9823 GN=C15orf39 PE=4 SV=5 CANONICAL=F1SJ54-1" }, "isoforms": [ { "isoform_ac": "F1SJ54-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ54/entry#F1SJ54-1", "sequence": { "sequence": "MAEKRPLGTLGPVMYGKLPRLEADSGPGHSLPPSSGNQDPCSYKGAYFSCPMGGPPKAGSERLASWTPYPPLYPTSVAGPPLRPDNLLTSCLLYRPPTESSEKVQDSGPVELLPFSPQAHSYPGPPLAAPKPVYRNPLCYGLPTCLGEGAAKRPLDVDWTLVTGSLLPPADPSCSLPPAPGKGPSLDGTFLRGVSAGTSGKDSTVSFSPCQAFLEKYRTIHSTGFLASKYAGPYSGDPKQALSEGPPSPWTQLAQPLGPACQDAVPTHYPLPHPTQALPCPTACRHPEKQGGYGSVLALQPLGAPKMAGYPAGGLSSPYLRQQAAQAPYMPPVGLDTYSYPSAPLPAPSPGLKLEPPLAPRCPLDFAPQPLGFPYPRDDLALYGVSPRLGGTPPSQSSVQPVPQPGAFQRACQPLPASQPCSEPARPAEKPGQEADEKMWLPSCRKEPVQPQLDEHPGAPIVIGDSPVPRTPPALPPCAQERPSLPPNEGTLPPSSPPMPIIDNVFSLAPYRDYLDAQAPEATAEPDPAPAPSESQDRDCRGSLPAQEAPSRVHSSLKEEVALDLSVKKAAAEALPIKVPCPAGHVKPTAAVDVPGVGNTVSDVPNVGDTVSDLQSLKKMVTEVPEVPRVPVTTEATPRTNFHSSVAFMFRKFKILRPAPLPAAMVPAMVPAVPTSAPTPAQPAPPHTPVPAGLKILSQPLPMACFNLALPSPPAVAVASPASAPAPAPSPAPAPALTPAPASVPAPAPVTGPDPASPTTADAQEQQFAGLHASLCDAISGSVAHSPPEKLREWLETSGPAGRAAWQDCQGVQGLLGKLLSQLQSFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERALRERALHGCTSRMLKLLALRQLPDIYPDLLGLQWRDCVRRQLGEHGAASVATGAV", "length": 939, "header": "tr|F1SJ54-1|F1SJ54_PIG Isoform 1 of Chromosome 7 C15orf39 homolog OS=Sus scrofa OX=9823 GN=C15orf39 PE=4 SV=5 CANONICAL=F1SJ54-1" }, "locus": { "chromosome": "7", "start_pos": 58386031, "end_pos": 58383215, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002110.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002110.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002060.5", "url": "https://www.ensembl.org/id/ENSSSCP00000002060.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 679, "start_aa": "Thr", "end_pos": 679, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr679", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ54", "url": "https://www.uniprot.org/uniprotkb/F1SJ54" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LTP8-1", "protein_name": "Similar to human chromosome 15 open reading frame 39", "gene_name": "C8h15orf39", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDPRSCLSPPWKSRSVSKSSSSSSGELDTCAVMAEKRPLGPLGPMMYGKLPRLESDLGPGHGLPLSAGNQDSCNYKGAYFSCPIGGTSKAGSERLASWTPYPSLYPSGVAGSPIRGDSLLTNCLLYRPPTEGSEKMQDSSELLPFGPQAHSYPGPPLAAPKPVYRSPLCYGLSTCLGDGAAKRPLDVDWTLVPGPLLPSADPPCSLATAPGKGQPLDGTFLRGLPSGGPGKDSSLTFSPCQTFLEKYRTVQSTGFLASKYPGPYSGDPKQAMSEGPSGPWTQLTQPLGPPCQDAVPAHYPLPPPPQALPCPPSCRHPEKQGSYGSLLPLPPLGAHKGAAYQAGGLGSPYLRQQAAQTPYMPPVGIDSYPYSSAPLPAPSPGLKLEPPLAPRCPLDFVPQTLSFPYARDDLSLYGASPGLGETPPSHSQNSVQPVPQPGAFQRTCQPLPAGQPCSEPMRPAEKPTPEAQEKTWLPSCRKEQLQSRPSERPGVPIVIRDSPVPRTSPALHPCAKERQSLPQKDARPPSSPPMPVIDNVFSLAPYRDYLDVQTPEPTVEQDSAPATSKSQDKDCKETLPVQDGASRPHRSLREEVALDLSVKKSMAEDVPVKVPSPEEHNKPSETVDGSGIENTASGLPGLKKMVTEIPEVTAEATPRTNFHSSVAFMFRKFKILRPAPLPAAIVPSPPTPVSVPAPTPVPVPVPVPVPVPAQPASNPPSVPMGLQILTQPLPVACFNLALPSPPAIAVASPAPASAPPPSPAPAPASGPAPASAQVPTAAPVYSEQHFTGLHTSLCDAISGSVAHSPPEKLREWLETTGPWGQAAWQDGQGVQGLLGRLLSQLQKFVCTQQCPFPHVVRAGAIFVPIHLVKERLFPKLPPASVDHVLQDHRVELRPTTLSEERALRERALHGCTSRMLKLLALRQLPDIYPDLLGLQWHDCVRRQLGGFDTEARALSPSEPTVTRDEPESQVLAGKLPAPKAKKPGKKPPTPGPEKTETTTGEGSCNPSPSSGASTSPPGPTLRARFRNLLETAWLNGVALPTWGHKASGADRPSPHPQLLGSQTHHL", "length": 1066 }, "evidence": [ { "id": "F1SJ54", "url": "https://omabrowser.org/oma/group/F1SJ54/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3TEI4-1", "protein_name": "Uncharacterized protein C15orf39 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEKRPLGPLGPMMYGKLPRLEPDPGPGHSLPLSASSQDSCNYKGAYFSCPIGGTSKAGSERLASWTPYPSLYPTGVAGSPLRGDNLLTNCLLYRPPTEGSEKIQDSSELLPFGPQAHAYPGPPLAAPKPVYRNPLCYGLSTCLGDGGTKRSLDGDWTLVTGPLLPSADPPCPLATAPGKGQPLDGTFLRGLPSGGPGKDSSLPFSPCQAFLEKYRTIQSTGFLASKYTSPYPGDAKQAMSEGPSSPWTQLAQPLGPPCQDAVAAHYPLPPPPQALPCPPSCHPEKQGSYGSLLPLPPLGAHKGAAYQAGGLGSPYLRQQAPQAPYMPPLGIDSYSYSSAPLPAPSPGLKLEPPLAPRCPLDFVPQTLGFPYARDDLSLYGASPGLGGTPPSHSQNSVQPVPQPGAFQRACQPLPASQPCSEPVRPAEKPTPEAQEKMWLPSCRKEQLQPRPNERPGVPIVIRDSPVPRTSPALHPCAKERQSVPQKDARPPSSPPMPVIDNVFSLAPYRDYLDVQTPEPRAERDSAPATSKSQDKDCKGNLPAQDGASRSHCSLREEVALDLSVKKTMAEGVPVKVPSPEVHEKPAEAVDGPGIENTVSGLPGLKKMVTEIPEVTAEATPRTNFHSSVAFMFRKFKILRTAPVPAAIVSSPTTPAPVPAPAPAQPVPNPPSVPVGLQILTQPLPVACFNLALPSPPAIVASPAPASAPPPSPAPAPAPASGPAPSSAQVPTAAPVDSPEQHFTGLHTSLCDAISGSVAHSPPEKLREWLETTGPWGQAAWQDCQGVQGLLGKLLSQLQKFVCTQRCPFPHVVRAGAIFVPIHLVKERLFPKLPPASVDHVLQDHRVELRPTTLSEERALRERALHGCTSRMLKLLALRQLPDIYPDLLGLQWHDCVRRQLGGFDTEARTLSPSEPTVTRDEPESQALAGKLPAPKVKKPGRKPPTPGPEKAEAATGEGSRNPSPSSGASTSPPGPTLRARFRNLLENAWLNGVALPTWGHKASGADRSSPHPQLLGSQTHHL", "length": 1023 }, "evidence": [ { "id": "F1SJ54", "url": "https://omabrowser.org/oma/group/F1SJ54/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZRI6-1", "protein_name": "Uncharacterized protein C15orf39", "gene_name": "C15orf39", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEKRPLRTLGPVMYGKLPRLETDSGLEHSLPHSVGNQDPCTYKGSYFSCPMAGTPKAESEQLASWTPYPPLYSTGMAGPPLQADNLLTNCLFYRSPAEGPEKMQDSSPVELLPFSPQAHSYPGPPLAAPKPVYRNPLCYGLSTCLGEGAVKRPLDVDWTLATGPLLPSADPPCSLAPAPSKGQTLDGTFLRGVPAEGSSKDSSGSFSPCQPFLEKYQTIHSTGFLASRYTGPYPRNSKQAMSEGPSSPWTQLAQPLGPPCQDTGPTHYPPPHHPPPHPPQALPCPPACRHPEKQGSYSPALPLQPLGGHKGTGYQAGGLGSPYLRQQAAQAPYIPPLGLDAYPYPSAPLPAPSPGLKLEPPLTPRCPLDFAPQTLSFPYARDDLSLYGASPGLGGTPPSQNNVRAVPQPGAFQRACQPLPASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPIVIRDSPVPCTPPALPPCARECQSLPQKEGARPPSSPPMPVIDNVFSLAPYRDYLDVPAPEATTEPDSATAEPDSAPATSEGQDKGCRGTLPAQEGPSGSKPLRGSLKEEVALDLSVRKPTAEASPVKASRSVEHAKPTAAMDVPDVGNMVSDLPGLKKIDTEAPGLPGVPVTTDAMPRTNFHSSVAFMFRKFKILRPAPLPAAVVPSTPTSAPAPTQPAPTPTSGPIGLRILAQQPLSVTCFSLALPSPPAVAVASPAPAPAPSPAPARAQAPASARDPAPAPAPVAGPAPASTSAPGDSLEQHFTGLHASLCDAISGSVAHSPPEKLREWLETAGPWGQAAWQDCQGVQGLLAKLLSQLQRFDRTHRCPFPHVVRAGAIFVPIHLVKERLFPRLPPASVDHVLQEHRVELRPTTLSEERALRELALPGCTSRMLKLLALRQLPDIYPDLLGLQWRDCVRRQLGDFDTEAGAVSSSEPTVARGEPESLALAQKSPAPKVRKPGRKPPTPGPEKAEAAAGEESCGASPTPATSASPPGPTLKARFRSLLETAWLNGLALPTWGHKSSRPDQPSPCPQLLDSQSHHL", "length": 1047 }, "evidence": [ { "id": "F1SJ54", "url": "https://omabrowser.org/oma/group/F1SJ54/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SJ54", "url": "https://www.uniprot.org/uniprotkb/F1SJ54" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SJ54", "url": "https://www.uniprot.org/uniprotkb/F1SJ54" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of inflammatory response", "id": "GO:0050728", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050728", "evidence": [ { "database": "UniProtKB", "id": "F1SJ54", "url": "https://www.uniprot.org/uniprotkb/F1SJ54" } ], "pmid": "" }, { "name": "negative regulation of canonical NF-kappaB signal transduction", "id": "GO:0043124", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043124", "evidence": [ { "database": "UniProtKB", "id": "F1SJ54", "url": "https://www.uniprot.org/uniprotkb/F1SJ54" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 679 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ71-1", "uniprot_ac": "F1SJ71", "uniprot_id": "F1SJ71_PIG", "mass": { "chemical_mass": 68201.0, "monoisotopic_mass": 68201.0 }, "refseq": { "ac": "XP_003128529", "name": "tyrosine-protein phosphatase non-receptor type 9 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128529" }, "gene_names": [ { "name": "PTPN9", "type": "recommended", "evidence": [ { "id": "F1SJ71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" } ] }, { "name": "PTPN9", "type": "synonym", "evidence": [ { "id": "XP_003128529", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128529" } ] } ], "protein_names": [ { "name": "Tyrosine-protein phosphatase non-receptor type 9", "type": "recommended", "evidence": [ { "id": "F1SJ71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ71/entry#names_and_taxonomy" } ] }, { "name": "3.1.3.48", "type": "synonym", "evidence": [ { "id": "F1SJ71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ71/entry#names_and_taxonomy" } ] }, { "name": "tyrosine-protein phosphatase non-receptor type 9 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003128529", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128529" } ] } ], "function": [ { "annotation": "Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71#function" }, { "database": "UniProtKB", "id": "ARBA00055430", "url": "https://www.uniprot.org/uniprotkb/ARBA00055430#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PTPN9", "url": "https://www.uniprot.org/uniprotkb/F1SJ71", "locus": { "chromosome": "7", "start_pos": 58164405, "end_pos": 58078389, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001878", "url": "https://www.ensembl.org/id/ENSSSCG00000001878" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001878", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001878", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00170", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00170", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14543", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14543", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513481", "url": "https://www.ncbi.nlm.nih.gov/gene/100513481", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000242", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000242", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000387", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000387", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001251", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001251", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003595", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003595", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011074", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011074", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029021", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036273", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036273", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050348", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050348", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513481", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513481", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DLASWNF", "url": "https://omabrowser.org/oma/group/DLASWNF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SJ71", "url": "https://www.orthodb.org/?gene=F1SJ71", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19134", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19134", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19134:SF285", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19134:SF285", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00102", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00102", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00650", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00650", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003128529", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003128529", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ71-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ71-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPATAPQPDMAPELTPEEEQATKQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECLPENLGGYVKIDLATWNFQFLSQMNGHPDPFDEIILFSLPPALDWDSVHVPDPHAMTIQELMDYVSTRQKRGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRAVRSQQRLAVSSMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEREGMVPSSHNLLAMEGQ", "length": 593, "header": "tr|F1SJ71-1|F1SJ71_PIG Isoform 1 of Tyrosine-protein phosphatase non-receptor type 9 OS=Sus scrofa OX=9823 GN=PTPN9 PE=1 SV=3 CANONICAL=F1SJ71-1" }, "isoforms": [ { "isoform_ac": "F1SJ71-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ71/entry#F1SJ71-1", "sequence": { "sequence": "MEPATAPQPDMAPELTPEEEQATKQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECLPENLGGYVKIDLATWNFQFLSQMNGHPDPFDEIILFSLPPALDWDSVHVPDPHAMTIQELMDYVSTRQKRGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRAVRSQQRLAVSSMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEREGMVPSSHNLLAMEGQ", "length": 593, "header": "tr|F1SJ71-1|F1SJ71_PIG Isoform 1 of Tyrosine-protein phosphatase non-receptor type 9 OS=Sus scrofa OX=9823 GN=PTPN9 PE=1 SV=3 CANONICAL=F1SJ71-1" }, "locus": { "chromosome": "7", "start_pos": 58161879, "end_pos": 58078890, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002103.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002103.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002053.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002053.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513481", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513481", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZCL5-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 9", "gene_name": "PTPN9", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAESTLMPLFPFSKQPPGRRKGRAKGSATKQFLEEINKWTGQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRLKEGIVKLKPHEEPLRSELLSGKFTILSVRDPSGASIALFTAKLHHPSRSVQHVVLQALFYLLDRAVESFETQRNGLVFIYDMAGSQYTNFELDLSKKILNLLKGAFPARLKKVFIVGAPMWFRVPYSIISLLLKEKLRERVQMVKMSELKEHLPRECLPETLGGCLKLDPLSWNCRFLPQQNGHPDPLDELILVPLVTPRDNGSLHVPGPKALTPQELLEHISRKQKRGIYEEYEDIRRRSPAGTFVCSLAPYNQEKNRYGDVPCLDQTRVKLAKPYSRPELTDYINASFMDGYKQRNAYIGTQGPLENTYGDFWRMVWEQNVLVIVMTTRLEEGGRRKCGQYWPLEKDFQMRFGALTITNLGVENLSHYKKTILEIHSAEGRERRLLSHFQYLSWPDYGVPSSAATLIDFLGAVKQQQRVAVSALGPRFKGHPGGPPIVVHCSAGIGRTGTLCALDICLSQLQDVGTLDIQQTVQRMRTQRAFSIQTPEQYYFCYSAVLEHAQRRGLLPAGQKGSAGH", "length": 598 }, "evidence": [ { "id": "F1SJ71", "url": "https://omabrowser.org/oma/group/F1SJ71/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7F716-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 9", "gene_name": "ptpn9a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMADRLSAEEEQATKQFLEEINKWTSQHGVSPLSWDVAVKFLMARKFDVLRAIELFHSYRETRLREGIVKLQPHKEPLRSELLSGKFTVLGVRDPSGASIALYTAKLHHPSKTGNHVVLQALFYLLDRAVESFETQRNGLVFIYDMAGSNYTNFELDLSKKILNLLKGAFPARLKKVLIVGAPVWFRVPYNLLSLLLKEKLRERVQMVKMADLRQHLPRDCLPEHLGGCLPLDVHNWNLQLLSEQNGRVDPVDELVGIPLENTSIHTPGAEAMSLAELMAHLNRAQRSGIYLEYEELRREQPPGTFTCALAAHNQERNRYGDVLCLDQTRVRLKARRNERSDYINASFMDGYKQKNAYIGTQGPLEKTYGDFWRMVWEQNVLVIVMTTRTDEGGRRKCGQYWPQEEGGQEVYGYIAVVNHRVDNHAHYNQTTLELHNTETFEQRQVTHFQFLSWPDYGVPSSAVSLIDFLGAVKHQQQWAVQAFGTQWRGHPLGPPMVVHCSAGIGRTGTFCALDICLSQLQDVGTLNICQTVRRMRSQRAFSIQTPEQYYFCHAAILEHAQRQGLLSANQ", "length": 571 }, "evidence": [ { "id": "F1SJ71", "url": "https://omabrowser.org/oma/group/F1SJ71/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1N6W1-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 9", "gene_name": "PTPN9", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRRGHAEAEAHRTGLPALPGDFCPPGGGSGGGMEPATAPQPDMAPELTPEEEQATKQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYTNFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECLPENLGGYVKIDLATWNFQFLSQMNGHPDPFDEIILFSLPPALDWDSVHVPDPQAMTIQELMDYVSTRQKRGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMTHYKKTTLEIHNIEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRAVRNQQRLAVSSMGARTKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEREGMVPPSHNLLAMEGQ", "length": 625 }, "evidence": [ { "id": "F1SJ71", "url": "https://omabrowser.org/oma/group/F1SJ71/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O35239-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 9", "gene_name": "Ptpn9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPATAPRPDMAPELTPEEEQATKQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAVELFHCYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSAQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECLPENLGGYVKIDLATWNFQFLPQVNGHPDPFDEIILSSLPPALDWDSVHVPGPHAMTIQELVDYVNTRQKRGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSMAVGNLGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEREGMVPSGHSLLAMDGQ", "length": 593 }, "evidence": [ { "id": "F1SJ71", "url": "https://omabrowser.org/oma/group/F1SJ71/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P43378-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 9", "gene_name": "PTPN9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPATAPRPDMAPELTPEEEQATKQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECLPENLGGYVKIDLATWNFQFLPQVNGHPDPFDEIILFSLPPALDWDSVHVPGPHAMTIQELVDYVNARQKQGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEKEGMVSSGQNLLAVESQ", "length": 593 }, "evidence": [ { "id": "F1SJ71", "url": "https://omabrowser.org/oma/group/F1SJ71/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q641Z2-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 9", "gene_name": "Ptpn9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPATAPRPDMAPELTPEEEQATKQFLEEINKWTVQYNVSPLSWNVAVKFLMARKFDVLRAVELFHCYRETRRKEGIVKLKPHEEPLRSEILSGKFTILNVRDPTGASIALFTARLHHPHKSVQHVVLQALFYLLDRAVDSFETQRNGLVFIYDMCGSNYANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECLPENLGGYIKIDLATWNFQFLPQVNGHPDPFDEIILFSLPPALDWDSVHVPGPHAMTIQELVDYVNTRQKQGIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWPLEKDSRIQFGFLTVTNLGVENMNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRSQQSMAVGSLGARSKGQCPEPPIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRAFSIQTPEQYYFCYKAILEFAEREGMVPSGHSLLAMDGQ", "length": 593 }, "evidence": [ { "id": "F1SJ71", "url": "https://omabrowser.org/oma/group/F1SJ71/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" } ], "pmid": "" }, { "name": "neuron projection terminus", "id": "GO:0044306", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044306", "evidence": [ { "database": "UniProtKB", "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein tyrosine phosphatase activity", "id": "GO:0004725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004725", "evidence": [ { "database": "UniProtKB", "id": "F1SJ71", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 359, "end_pos": 361, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SJ71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" }, { "id": "PS50191", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50191" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CRAL-TRIO", "eco_id": "ECO_0000259", "start_pos": 84, "end_pos": 243, "start_aa": "Glu", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SJ71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" }, { "id": "PS50056", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50056" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tyrosine specific protein phosphatases", "eco_id": "ECO_0000259", "start_pos": 481, "end_pos": 565, "start_aa": "Ile", "end_aa": "Tyr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SJ71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ71" }, { "id": "PS50055", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50055" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tyrosine-protein phosphatase", "eco_id": "ECO_0000259", "start_pos": 303, "end_pos": 574, "start_aa": "Ile", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 359, "end_pos": 361 }, { "start_pos": 38, "end_pos": 40 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJ91-1", "uniprot_ac": "F1SJ91", "uniprot_id": "F1SJ91_PIG", "mass": { "chemical_mass": 28062.0, "monoisotopic_mass": 28062.0 }, "refseq": { "ac": "NP_001231125", "name": "tetraspanin-3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231125" }, "gene_names": [ { "name": "TSPAN3", "type": "recommended", "evidence": [ { "id": "F1SJ91", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ91" } ] }, { "name": "TSPAN3", "type": "synonym", "evidence": [ { "id": "NP_001231125", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231125" } ] } ], "protein_names": [ { "name": "Tetraspanin", "type": "recommended", "evidence": [ { "id": "F1SJ91", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ91/entry#names_and_taxonomy" } ] }, { "name": "tetraspanin-3", "type": "synonym", "evidence": [ { "id": "NP_001231125", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231125" } ] }, { "name": "transmembrane 4 superfamily member 8", "type": "synonym", "evidence": [ { "id": "NP_001231125", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231125" } ] } ], "function": [ { "annotation": "Regulates the proliferation and migration of oligodendrocytes, a process essential for normal myelination and repair.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RIV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RIV0#function" }, { "database": "UniProtKB", "id": "ARBA00055382", "url": "https://www.uniprot.org/uniprotkb/ARBA00055382#function" }, { "database": "UniProtKB", "id": "A0A4X1TWF2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TWF2#function" }, { "database": "UniProtKB", "id": "A0A4X1TWF7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TWF7#function" }, { "database": "UniProtKB", "id": "A0A4X1TW17", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TW17#function" }, { "database": "UniProtKB", "id": "F1SJ91", "url": "https://www.uniprot.org/uniprotkb/F1SJ91#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJ91", "url": "https://www.uniprot.org/uniprotkb/F1SJ91" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TSPAN3", "url": "https://www.uniprot.org/uniprotkb/F1SJ91", "locus": { "chromosome": "7", "start_pos": 57159465, "end_pos": 57187446, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001868", "url": "https://www.ensembl.org/id/ENSSSCG00000001868" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001868", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001868", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03163", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03163", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157865", "url": "https://www.ncbi.nlm.nih.gov/gene/100157865", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000301", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000301", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008952", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008952", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018499", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018499", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018503", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018503", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157865", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157865", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ACKENKC", "url": "https://omabrowser.org/oma/group/ACKENKC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SJ91", "url": "https://www.orthodb.org/?gene=F1SJ91", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19282", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19282", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19282:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19282:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00335", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00335", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231125", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231125", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1TW17", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TW17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TW17-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TW17-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TWF2", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TWF2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TWF2-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TWF2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TWF7", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TWF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TWF7-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TWF7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RIV0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RIV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RIV0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RIV0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ91", "url": "https://www.uniprot.org/uniprotkb/F1SJ91", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ91-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ91-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFVIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETSSNCNGSLAYPSDLYSEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGGTYA", "length": 253, "header": "tr|F1SJ91-1|F1SJ91_PIG Isoform 1 of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN3 PE=3 SV=3 CANONICAL=F1SJ91-1" }, "isoforms": [ { "isoform_ac": "A0A4X1TW17-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ91/entry#A0A4X1TW17-1", "sequence": { "sequence": "MGQCGITSSKTVLVFLNLIFWVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETSSNCNGSLAYPSDLYSEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGGTYA", "length": 164, "header": "tr|A0A4X1TW17-1|A0A4X1TW17_PIG Computationally mapped isoform of Tetraspanin-3 OS=Sus scrofa OX=9823 GN=TSPAN3 PE=3 SV=1 CANONICAL=F1SJ91-1" }, "locus": { "chromosome": "7", "start_pos": 57187229, "end_pos": 57162892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091357.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091357.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068728.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068728.1" } ] } }, { "isoform_ac": "A0A4X1TWF2-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ91/entry#A0A4X1TWF2-1", "sequence": { "sequence": "MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFVIGLIGCCATIRESRCGLATVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETSSNCNGSLAYPSDLYSEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGGTYA", "length": 228, "header": "tr|A0A4X1TWF2-1|A0A4X1TWF2_PIG Computationally mapped isoform of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN3 PE=3 SV=1 CANONICAL=F1SJ91-1" }, "locus": { "chromosome": "7", "start_pos": 57187229, "end_pos": 57162892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103220.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103220.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079895.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079895.1" } ] } }, { "isoform_ac": "A0A4X1TWF7-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ91/entry#A0A4X1TWF7-1", "sequence": { "sequence": "MGQCGITSSKTVLVFLNLIFWFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETSSNCNGSLAYPSDLYSEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGGTYA", "length": 189, "header": "tr|A0A4X1TWF7-1|A0A4X1TWF7_PIG Computationally mapped isoform of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN3 PE=3 SV=1 CANONICAL=F1SJ91-1" }, "locus": { "chromosome": "7", "start_pos": 57187229, "end_pos": 57162892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042894.2", "url": "https://www.ensembl.org/id/ENSSSCT00000042894.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031661.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031661.2" } ] } }, { "isoform_ac": "A0A5G2RIV0-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ91/entry#A0A5G2RIV0-1", "sequence": { "sequence": "MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFVIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETSSNCNGSLAYPSDLYSEGCEALVVKKLQEIMMHVIWAALAFAAIQNLHLIT", "length": 229, "header": "tr|A0A5G2RIV0-1|A0A5G2RIV0_PIG Computationally mapped isoform of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN3 PE=3 SV=2 CANONICAL=F1SJ91-1" }, "locus": { "chromosome": "7", "start_pos": 57187229, "end_pos": 57169410, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080172.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080172.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071594.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071594.2" } ] } }, { "isoform_ac": "F1SJ91-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ91/entry#F1SJ91-1", "sequence": { "sequence": "MGQCGITSSKTVLVFLNLIFWGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFVIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETSSNCNGSLAYPSDLYSEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGGTYA", "length": 253, "header": "tr|F1SJ91-1|F1SJ91_PIG Isoform 1 of Tetraspanin OS=Sus scrofa OX=9823 GN=TSPAN3 PE=3 SV=3 CANONICAL=F1SJ91-1" }, "locus": { "chromosome": "7", "start_pos": 57187229, "end_pos": 57162892, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002093.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002093.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002043.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002043.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ91", "url": "https://www.uniprot.org/uniprotkb/F1SJ91" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157865", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157865", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "O60637-1", "protein_name": "Tetraspanin-3", "gene_name": "TSPAN3", "tax_id": 9606, 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"categories": [ "Gene Expression" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056870", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056870", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR48026", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48026", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48026:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48026:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24905", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24905", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SJI3", "url": "https://www.uniprot.org/uniprotkb/F1SJI3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJI3-1", "url": "https://www.uniprot.org/uniprotkb/F1SJI3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJK7", "url": "https://www.uniprot.org/uniprotkb/F1SJK7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "dipeptidyl-peptidase activity", "id": "GO:0008239", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008239", "evidence": [ { "database": "UniProtKB", "id": "F1SJK7", "url": "https://www.uniprot.org/uniprotkb/F1SJK7" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "F1SJK7", 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"MALPPFFAPGRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASGETSRGSSGGGAFYPVPPPPLPPPPPQCRPFLGTDAGERPRPPPPGPGPPWSPRWPEAPPPSDVLGDAALQRLRDRQWLEAVFGTPRRAGCPVPTRAPAGPSLGEVRARLCGALRLVRRLRDLGQALRDAEADGAAWAQLHAQAQPLRAELAERLQLLTQAAYVGEARRRLERVRRRRLRLRERAREREAEREAEAARAAEREQEIDRWRVKCVQEVEEKKREQELKAAADGVLSEVRKKQADTKRMVDILRALEKLRKLRKEAAARKGVCPPASADETFEHHLQRLRKLIKKRSELYEAEERALRVMLEGEQEEEKREVEKKQRKEEKILLQKREIESKLFGDPDEFPLAHLLQPFRQYYLQAEHSLPALIQIRHDWDQYLVPSDHPKGNSVPQGWVLPPLPSNDIWATAIKLH", "length": 482, "header": "tr|F1SJL6-1|F1SJL6_PIG Isoform 1 of Programmed cell death 7 OS=Sus scrofa OX=9823 GN=PDCD7 PE=4 SV=3 CANONICAL=F1SJL6-1" }, "isoforms": [ { "isoform_ac": "F1SJL6-1", "url": "https://www.uniprot.org/uniprotkb/F1SJL6/entry#F1SJL6-1", "sequence": { "sequence": "MALPPFFAPGRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASGETSRGSSGGGAFYPVPPPPLPPPPPQCRPFLGTDAGERPRPPPPGPGPPWSPRWPEAPPPSDVLGDAALQRLRDRQWLEAVFGTPRRAGCPVPTRAPAGPSLGEVRARLCGALRLVRRLRDLGQALRDAEADGAAWAQLHAQAQPLRAELAERLQLLTQAAYVGEARRRLERVRRRRLRLRERAREREAEREAEAARAAEREQEIDRWRVKCVQEVEEKKREQELKAAADGVLSEVRKKQADTKRMVDILRALEKLRKLRKEAAARKGVCPPASADETFEHHLQRLRKLIKKRSELYEAEERALRVMLEGEQEEEKREVEKKQRKEEKILLQKREIESKLFGDPDEFPLAHLLQPFRQYYLQAEHSLPALIQIRHDWDQYLVPSDHPKGNSVPQGWVLPPLPSNDIWATAIKLH", "length": 482, "header": "tr|F1SJL6-1|F1SJL6_PIG Isoform 1 of Programmed cell death 7 OS=Sus scrofa OX=9823 GN=PDCD7 PE=4 SV=3 CANONICAL=F1SJL6-1" }, "locus": { "chromosome": "1", "start_pos": 163170215, "end_pos": 163157964, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005436.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005436.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005301.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005301.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJL6", "url": "https://www.uniprot.org/uniprotkb/F1SJL6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-72165", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72165", "resource": "Reactome", "description": "mRNA Splicing - Minor Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "U12-type spliceosomal complex", "id": "GO:0005689", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005689", "evidence": [ { "database": "UniProtKB", "id": "F1SJL6", "url": "https://www.uniprot.org/uniprotkb/F1SJL6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SJL6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 482, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SJL6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SJL6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SJM8-1", "uniprot_ac": "F1SJM8", "uniprot_id": "F1SJM8_PIG", "mass": { "chemical_mass": 287848.0, "monoisotopic_mass": 287848.0 }, "refseq": { "ac": "XP_020925262", "name": "immunoglobulin superfamily member 10 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925262" }, "gene_names": [ { "name": "IGSF10", "type": "recommended", "evidence": [ { "id": "F1SJM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJM8" } ] }, { "name": "IGSF10", "type": "synonym", "evidence": [ { "id": "XP_020925262", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925262" } ] } ], "protein_names": [ { "name": "Immunoglobulin superfamily member 10", "type": "recommended", "evidence": [ { "id": "F1SJM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJM8/entry#names_and_taxonomy" } ] }, { "name": "Calvaria mechanical force protein 608", "type": "synonym", "evidence": [ { "id": "F1SJM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJM8/entry#names_and_taxonomy" } ] }, { "name": "immunoglobulin superfamily member 10 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020925262", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925262" } ] } ], "function": [ { "annotation": "Involved in the control of early migration of neurons expressing gonadotropin-releasing hormone (GNRH neurons). May be involved in the maintenance of osteochondroprogenitor cells pool.", "evidence": [ { "database": "UniProtKB", "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8#function" }, { "database": "UniProtKB", "id": "ARBA00054041", "url": "https://www.uniprot.org/uniprotkb/ARBA00054041#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IGSF10", "url": "https://www.uniprot.org/uniprotkb/F1SJM8", "locus": { "chromosome": "13", "start_pos": 91625431, "end_pos": 91679079, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011717", "url": "https://www.ensembl.org/id/ENSSSCG00000011717" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011717", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011717", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00096", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00096", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524956", "url": "https://www.ncbi.nlm.nih.gov/gene/100524956", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000372", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000372", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013098", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013098", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050467", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050467", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR45842", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45842", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45842:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45842:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07679", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07679", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020925262", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925262", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJM8-1", "url": "https://www.uniprot.org/uniprotkb/F1SJM8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKVKGRGVHLLVSFTVICLVVAPGARACPRRCACYLPTEVHCTFRYLTSIPDGIPPNVERINLGYNSLVRLTESDFSGLNKLELLMLHSNGIHTIPAKTFSDLQALQVLKMSYNKVRKLQKDTFYGLRSLTRLHMDHNNIEFINPEVFYGLTSLRLVHLEGNQLTKLHPDTFVSLRYLRIFRTSFIKYLYLSDNFLSSIPQEMVSYMPDLESLYLHGNPWTCDCHLKWLSNWIREKPDIIKCKKDRSPSSPQQCPLCVNPRTSKDEPLVMVPASAFLCAKPIIDHSLKTKNLTLLEDSGSVSISPQDFMTPFGSLALNMTDQSGNEANMICSIQKPSMTSSMAFTERNDYITLNASFSTFLVCNIDYSHIQPVWQVLALYSDSPLVLERSHLLTETPKLCYKYKQAVPKPENIFTNIEADLRADPPWLMQDQISLQLNRTATTFSTLQIQYSSEARITLPRAEMRLDKYKWTMISRDNHTKLEHTVLVGGTIGLDCPGQGDPPPHLEWLLADGSKVRAPYVSEDGRILIDKSGKLELQMADIFDTGIYHCISTNYDDADFLTYRITVIEPSIEPYQENGAHHIVPSGETLDLPCHSTGIPDASVSWVLPGNSVLQQSSRDKKILNNGTLRILQVTQKDQGHYRCVAANPSGVDFLINQVSVQVKGQRPVEHNVEMDGSGFDEPSSIAQLKDPPATQLPTSAPKGAEAGTQVLSTSKNHRHRVLIHQRRGEATSHRSKEHRRRFPPSARRIDPQHWAALLEKAKKNTMPERQENTTAKPLPPVTQLLETPSEEVDSSGMLPPDEEVLAAKAPGVLARTATADSSKSSESPVTSIAAAPKVSPVVSPQILPPEKPTNSKPSTTIKTKAVSKNTNPATSGKMQGTTNHNLSSVFPLPLEATHFQDADNMGRKRKYLQSAPPITVGAPTVKNIHVEMLNSANGKADTVLGSVNATNSHQSSVTGVSDPRSNHSHTTKKPSTSKLHSGPYTTAHSQLHIPRNSTVNIPLSRRFGRRRKIWSRGRIISPYKTPVLREHRYSFVRPTFRAASEESTTAFSATELNVVCPSCSPSQRFTTAATALPFPRSSPITLPKAKISRVTAEESTTLVHSPSLLFENKPHKDVEKTTPTIKYFNAESIQVIPASAVTTHAPTAISMENTHGTNISYPSVSNTSEAKRDSMIIFPLPGPTIKPLMPTTIAITRFSRKKIPWHQIFVNNHIQREKLRNQHKFDSHKSTDRMLPKTSPALLTASPLHFTTLSASVMQIPSVTSAKVHHSTVKTHSPLSPPAAKDLPFPPIYPIPPSILSKASSTNFIPMQIATLTATPSPPASVIITKTQIARLRTQKVQRKKEPHNRTSGFIISTTMPPPVLTTAETSTKPSMSAFTHSSLETIKETSSTVDLHARTFTLTDVLEEPLQENTQTLKSRTASETTLSSKLHQNTMARETTIRHSTMPPVLSTSATPMPISTSPPLSNQIAVTDNMATPIFRITTSTIVKPHESLRHNANPQQITETSPPIHPNAKFALGTTHFIYSNLLHSTPMPAPITAKPQNSKLTPSPLSENHFWHKSYPEIAEKGKKPVVSILPTPEDTTHPSYWDIQKNAKKSDRKTVQKITSRLLPFDSLSRNIFERPRIVGGKAASFTVPANSDAFLPCEAVGNPEPTIHWTKISPGLDLSKRNENSRFQVLPNGTLSIQKVDIQDRGQYLCSASNSFGTDRLHVTLSVVSYPPRILERRTKEITVHSRSTVKVKCRVEGRPSPTISWILANQTVVSKSSEGNGQALVMSDGTLVIHNISIYDRGFYKCMASNPVGQDSLLIKIQVIAAPPVILEQKRQVITGAWGKSLKLPCTAKGTPQPGIHWVLSDGTEVKPLQFINSKFLFSNGTLLIRNMASSDTGTYECIATSSTGSERRVVILTVEDQETIPRIESASQKWTEVNLGDKLLLNCSAIGEPKPKIIWRLPSKAVVDQWHRMGSRIHVYPNGSLLIGSVTEKDSGDYLCVARNKMGDDLTLMHVSLRWKPAKIDHKQHFRKQAFHGKDFQVDCKASGSPLPEISWSLPDGTVINNAMQADDSGLRNRRFTLFDNGTLYFNKVGMAEEGDYTCYAQNTLGKDEMKVHLTVITAAPRIRQGSRANTRVKAGDTAVLDCEVIGEPKPKIFWLLPSSDVISFSQDRYTFHPNGSLSISKVKLLDSGEYVCVARNPSGDDTKMSKLDVVAKPPLINGLYTNKTVMKATAVRHSKKHFDCRAEGTPSPQIMWIMPDNIFLTAPYYGSRITVHKNGTLEIRNVRLSDSADFTCVARNEGGESVLVVQLEVLEMLRRPTFRNPFNEKIVAQLGKPTALNCSVDGNPPPEIIWILPNGTQFPNGPPNSQHLIASNGSFIIYKTTRDDAGKYRCGARNKVGYIEKLIVLEIGQKPIILTYARETVYCISGDSLSLHCVSNGSPKPHIKWTVPSGYVLDRPQINGKYIFHENGTLVIKDATAYDRGNYICKAQNSVGHAVITVPVMVVAYPPRITNRLPRSIRTRTGVALQLPCVALGVPRPEVTWEMPDHSLFSGADIGRMSGIQSFHPRGTLVIQNPQTSDSGIYKCTAKNPLGSDYATTYIQVI", "length": 2601, "header": "tr|F1SJM8-1|F1SJM8_PIG Isoform 1 of Immunoglobulin superfamily member 10 OS=Sus scrofa OX=9823 GN=IGSF10 PE=4 SV=3 CANONICAL=F1SJM8-1" }, "isoforms": [ { "isoform_ac": "F1SJM8-1", "url": "https://www.uniprot.org/uniprotkb/F1SJM8/entry#F1SJM8-1", "sequence": { "sequence": 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"length": 2601, "header": "tr|F1SJM8-1|F1SJM8_PIG Isoform 1 of Immunoglobulin superfamily member 10 OS=Sus scrofa OX=9823 GN=IGSF10 PE=4 SV=3 CANONICAL=F1SJM8-1" }, "locus": { "chromosome": "13", "start_pos": 91676860, "end_pos": 91625912, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012827.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012827.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012489.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012489.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1320, "start_aa": "Thr", "end_pos": 1320, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1320", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1582, "start_aa": "Thr", "end_pos": 1582, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1582", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8" } ], "pmid": "" }, { "name": "ossification", "id": "GO:0001503", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001503", "evidence": [ { "database": "UniProtKB", "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8" } ], "pmid": "" }, { "name": "regulation of neuron migration", "id": "GO:2001222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001222", "evidence": [ { "database": "UniProtKB", "id": "F1SJM8", "url": "https://www.uniprot.org/uniprotkb/F1SJM8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1159, "end_pos": 1161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1167, "end_pos": 1169, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1350, "end_pos": 1352, "annotation": 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Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJN3", "url": "https://www.uniprot.org/uniprotkb/F1SJN3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524220", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524220", "resource": "KEGG Pathway" }, { "id": "R-SSC-417957", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-417957", "resource": "Reactome", "description": "P2Y receptors" }, { "id": "R-SSC-418594", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-418594", "resource": "Reactome", "description": "G alpha (i) signalling events" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2KD19-1", 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"MFNSSTNSSGSSCSNSTVITRAVIPLIYCLIFVVGLLLNGVAAWIFLCISSKKSFIVYLKNIVVADLLMSLTFPFKILADSEIAPPQLNTFVCRYSAVVFYANMYIGISFFGLIGFDRYYKIVKPLFTSFVHTVHYSKVISAIIWLLITFITLPNMILTNEISKANDSRTCIGLKSELGKQWHEVSSYICTGIFWIVFLLLIIFYTSISKKIYSSYKKFRRNSDSAKRKTSRNIFTIMFVFVLCFVPYHFCRIPYTLSQTSPQFNCRSQRALFLAKEFTLLLSAANVCLDPIIYFFLCQPFRERLYQKLHLQPKTSGEAEITKSRRSNTLQESVNIL", "length": 337 }, "evidence": [ { "id": "F1SJN3", "url": "https://omabrowser.org/oma/group/F1SJN3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HG48-1", "protein_name": "P2Y purinoceptor 14", "gene_name": "P2ry14", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": 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"database": "Ensembl Peptide", "id": "ENSSSCP00000029202.3", "url": "https://www.ensembl.org/id/ENSSSCP00000029202.3" } ] } }, { "isoform_ac": "F1SJW8-1", "url": "https://www.uniprot.org/uniprotkb/F1SJW8/entry#F1SJW8-1", "sequence": { "sequence": "MAFRLTPLTLLLLLLLLAGDRASSTLNDVSHVDPGSSEEGKNEGDIAKGDISKIVSIQPTKSSSIFPTNLTIVTTSATQPVNQSTTQPIEPTTLPTTKPFLTTTEPFLPTTKPFCPVPSISCPEESHSAEAVLGEALTDFSVRLYHAFSAIKKAGTNMVFSPFSIASLLTHVLLGAGDETKGNLENLLSYPKDFTCVHQALKAFRSEGFTSVSQIFHSPDLAIRDTFLNASQSLYGSSPRTLGNDSNVNLELINAWVAEKTNHRINQLLNSLPSETRLVLLNAIYLSAKWKVMFNHKKTSLEAFYSKSSEIKVHMLTSKKYPVAHFTDPTLKAKVGRLQLSHNLSLVILVPQTLKHRLEDMEKALSAPVFKAVMNKLESTKFYPTHFMMPRIKIKGNQDMLPIMEKLEFFDFTYDLNLCGLTEDADLQVSTMQHQAMLELMETGVEVAAASAFSVARSLLVFEVQQPFLFVLWDQHHKFPVFMGRVYDPRS", "length": 491, "header": "tr|F1SJW8-1|F1SJW8_PIG Isoform 1 of Serpin family G member 1 OS=Sus scrofa OX=9823 GN=SERPING1 PE=1 SV=1 CANONICAL=F1SJW8-1" }, "locus": { "chromosome": "2", "start_pos": 13338152, "end_pos": 13324408, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014401.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014401.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014011.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014011.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJW8", "url": "https://www.uniprot.org/uniprotkb/F1SJW8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-114608", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114608", "resource": "Reactome", "description": "Platelet degranulation" }, { "id": "R-SSC-9769739", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9769739", "resource": "Reactome", "description": "Regulation of clotting cascade" }, { "id": "R-SSC-977606", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-977606", "resource": "Reactome", "description": "Regulation of Complement cascade" }, { "id": "R-SSC-9855719", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9855719", "resource": "Reactome", "description": "Regulation of FXIIa and plasma kallikrein activity" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9TZ37-1", "protein_name": "Serpin family G member 1", "gene_name": "SERPING1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEQVRAEVASQMASRLTPLTLLLLLLLAGDRVTSDMIVGPGNLQEGESEGDSQKGGILDGESIQGNEDSPTLPITNLTVVPATVTKPFSQPATEPVQSTIQPTAEPFCLAPVTSCSDSEIRSAEAVLGEALTDFSLRLYQDFSVLKKRETNFIFSPFSIASLLTQILLGAGGETRVSLERLLSYPQNFSCVHHALRAFMSEGFTSFSQIFHSSDLTIKDTFAEASQRLYGSSPRPLGNDSTASLELINDWVAKKTNLRIRRLLDSLPEDTRLILLNAVALSAKWKIAFDKGRTSTKPFHLKSSAIKVPMMNSKKYPVASFTDRTLNARVGRLQLSHNLSFVILVPQTVKHHLQDLEQALSTAVFKAVIKKLEMTKFHPTHLTMPRIKVQSSQDMLDYFDFIYDVNLCGLTEDPDVQVSGIRHQATLELTESGVEATAASVVSVARNLLLFEVQQPFLFLLWDQQHKFPVFMGRVYDPKG", "length": 479 }, "evidence": [ { "id": "F1SJW8", "url": "https://omabrowser.org/oma/group/F1SJW8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ACD6B6R5-1", "protein_name": "Plasma protease C1 inhibitor isoform X1", "gene_name": "serping1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLANICVMIYQLAERRKQQEDISAKQTDISWTSRFFQIEIRPATESSTMYRVLLLLCVGLSLSSCDITVLLYSSISLPCVPDNAPALAGSTYIWNFTAPQTEPHTLSEKGKILTLKNVNSSYSGQYKCVQEGYRDEARVRRSRTFSLQVEEPPLLQEWQVIRVEAGYDVILPCKVSFSNETISPSVVWKQVTGQGAVLLNPDKNTDVEEKKEKDKEPQRVFWDISPEEKDWAIKISQTRWKDAGMYQCVINTNQTLLVELEMEGPPPPHCEGYTDPWESCNDPDSRSSKAILQESLGDFSTSVYSRLKGSKAKANLIFSPISIAAALSNLLLGARGKTRMHLEGALGLPLGFSCLHTELKKLRGVMKDTLKMASAIFYNPEQQLAEAFINQSKEFYEFVPQKLTNDSTRNVALINKWVENKTNKKITQLIDDVDPSTTFVLLNAVYFNGKWKTVFESTNNKEKFTMFSGETKDVKTLYSSNYILQMGYNKQLKADVGKFPLTGQNSLYILVPRTLSEESFLLMENNINRNTLEEMVSEMNQTPAQSAEVTLPAIKLTMTTQVDDLLRNMGLSDLFNNPNLCGMFPGEPESFISDVRHRAFLSLTEKGVEAAAATSISFSRSFSSFSALQPFVLILWSDEAAVPLFMGRIINP", "length": 652 }, "evidence": [ { "id": "F1SJW8", "url": "https://omabrowser.org/oma/group/F1SJW8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P05155-1", "protein_name": "Plasma protease C1 inhibitor", "gene_name": "SERPING1", "tax_id": 9606, "organism": "Homo 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SK17-1", "uniprot_ac": "F1SK17", "uniprot_id": "F1SK17_PIG", "mass": { "chemical_mass": 60759.0, "monoisotopic_mass": 60759.0 }, "refseq": {}, "gene_names": [ { "name": "PLIN1", "type": "recommended", "evidence": [ { "id": "F1SK17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ] } ], "protein_names": [ { "name": "Perilipin 1", "type": "synonym", "evidence": [ { "id": "F1SK17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK17/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLIN1", "url": "https://www.uniprot.org/uniprotkb/F1SK17", "locus": { "chromosome": "7", "start_pos": 55236348, "end_pos": 55250797, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001844", "url": "https://www.ensembl.org/id/ENSSSCG00000001844" } ] } } ], "crossref": [ { "id": "F1SK17", "url": "https://alphafold.ebi.ac.uk/entry/F1SK17", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000001844", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001844", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR004279", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004279", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042998", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042998", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR47138", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47138", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47138:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47138:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03036", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03036", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK17-1", "url": "https://www.uniprot.org/uniprotkb/F1SK17-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK18", "url": "https://www.uniprot.org/uniprotkb/F1SK18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK18-1", "url": "https://www.uniprot.org/uniprotkb/F1SK18-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGIQSAGSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTISTRLRSARNSISVPVTSTADKVLGAALAGCELAWGMAKDTAEYAANTRAGRLASGGADLALGGVEKVVELLLPPAKEESASAPGHQHGQKPPKAKPSLVSRVGTLASTISQHTFQATSRALKQGHALAMWIPGVAPLSSLAQWGASAAMQVVSRRQSVVRVPWLHNLAATQEEDHDDQTDTEGEEMEEEAEPETEENKLSEGAALPGPQGFLGKAVHTLQRALQSTISLVTWAPATALGTAGRMLPFTPARAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDIDNPPPEAERREAERRGSGALPAAPEAAPRPAPTRGSLRSARGPGAEDRGTPLPRCAPPSRQCPARSRRAGSATASSGPASWSPSWAARSTTSCARRAELASRARPGPARAPPAPPRARALSPANQKNLRGQASVPSFVPRTLPRHTSSFEHPFGA", "length": 574, "header": "tr|F1SK17-1|F1SK17_PIG Isoform 1 of Perilipin 1 OS=Sus scrofa OX=9823 GN=PLIN1 PE=1 SV=3 CANONICAL=F1SK17-1" }, "isoforms": [ { "isoform_ac": "F1SK17-1", "url": "https://www.uniprot.org/uniprotkb/F1SK17/entry#F1SK17-1", "sequence": { "sequence": "MAVNKGLTLLDGDLPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGIQSAGSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTISTRLRSARNSISVPVTSTADKVLGAALAGCELAWGMAKDTAEYAANTRAGRLASGGADLALGGVEKVVELLLPPAKEESASAPGHQHGQKPPKAKPSLVSRVGTLASTISQHTFQATSRALKQGHALAMWIPGVAPLSSLAQWGASAAMQVVSRRQSVVRVPWLHNLAATQEEDHDDQTDTEGEEMEEEAEPETEENKLSEGAALPGPQGFLGKAVHTLQRALQSTISLVTWAPATALGTAGRMLPFTPARAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDIDNPPPEAERREAERRGSGALPAAPEAAPRPAPTRGSLRSARGPGAEDRGTPLPRCAPPSRQCPARSRRAGSATASSGPASWSPSWAARSTTSCARRAELASRARPGPARAPPAPPRARALSPANQKNLRGQASVPSFVPRTLPRHTSSFEHPFGA", "length": 574, "header": "tr|F1SK17-1|F1SK17_PIG Isoform 1 of Perilipin 1 OS=Sus scrofa OX=9823 GN=PLIN1 PE=1 SV=3 CANONICAL=F1SK17-1" }, "locus": { "chromosome": "7", "start_pos": 55250777, "end_pos": 55237352, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002067.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002067.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002018.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002018.3" } ] } }, { "isoform_ac": "F1SK18-1", "url": "https://www.uniprot.org/uniprotkb/F1SK17/entry#F1SK18-1", "sequence": { "sequence": "LPIQGGLKLQRGGAPEQENVLQRVLQLPVVSGTCECFQKTYTSTKEAHPLVASVCNAYEKGIQSAGSLAAWSMEPVVRRLSTQFTAANELACRGLDHLEEKIPALQYPPEKIASELKDTISTRLRSARNSISVPVTSTADKVLGAALAGCELAWGMAKDTAEYAANTRAGRLASGGADLALGGVEKVVELLLPPAKEESASAPGHQHGQKPPKAKPSLVSRVGTLASTISQHTFQATSRALKQGHALAMWIPGVAPLSSLAQWGASAAMQVVSRRQSVVRVPWLHNLAATQEEDHDDQTDTEGEEMEEEAEPETEENKLSEGAALPGPQGFLGKAVHTLQRALQSTISLVTWAPATALGTAGRMLPFTPARAVSSTKGRAMSLSDALKGVTDNVVDTVVHYVPLPRLSLMEPESEFRDIDNPPPEAERREAERRGSGALPAAPEAAPRPAPTRGSLRSARGPGAEDRGTPLPRCAPPSRQCPARSRRAGSATASSGPASWSPSWAARSTTSCARRAELASRARPGPARAPPAPPRARALSPANQKNLRGQASVPSFVPRTLPRHTSSFEHPFGA", "length": 574, "header": "tr|F1SK18-1|F1SK18_PIG Computationally mapped isoform of Perilipin 1 OS=Sus scrofa OX=9823 GN=PLIN1 PE=1 SV=4 CANONICAL=F1SK17-1" }, "locus": { "chromosome": "7", "start_pos": 55247954, "end_pos": 55237352, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002066.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002066.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002017.4", "url": "https://www.ensembl.org/id/ENSSSCP00000002017.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" }, { "name": "cell periphery", "id": "GO:0071944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071944", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" }, { "name": "protein sequestering activity", "id": "GO:0140311", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140311", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" }, { "name": "negative regulation of triglyceride catabolic process", "id": "GO:0010897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010897", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" }, { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" }, { "name": "negative regulation of lipid catabolic process", "id": "GO:0050995", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050995", "evidence": [ { "database": "UniProtKB", "id": "F1SK17", "url": "https://www.uniprot.org/uniprotkb/F1SK17" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SK17-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 574, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SK17-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SK17" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039467", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039467", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517687", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517687", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SK28", "url": "https://www.orthodb.org/?gene=F1SK28", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22929", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22929", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22929:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22929:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15963", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15963", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-76061", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76061", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-76066", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76066", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-76071", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76071", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005672583", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005672583", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SK28", "url": "https://www.uniprot.org/uniprotkb/F1SK28", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK28-1", "url": "https://www.uniprot.org/uniprotkb/F1SK28-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { 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"length": 2449, "header": "tr|F1SK28-1|F1SK28_PIG Isoform 1 of B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB OS=Sus scrofa OX=9823 GN=BDP1 PE=4 SV=3 CANONICAL=F1SK28-1" }, "isoforms": [ { "isoform_ac": "F1SK28-1", "url": "https://www.uniprot.org/uniprotkb/F1SK28/entry#F1SK28-1", "sequence": { "sequence": "MFRRARLSVKPNVRPGAGARGSTAPNPQREQEAPRPPEPAAASVPKPAEPTDVPPVDSGEAEPQEKTPKSSDEKTDGGNNVEESSKSSPTVSQRRKRLSSTSSVVKPSVSVPSEPHPLSTVNNQEAPQPNPVPTKEKQPCSDRFRIYKAQKLREMLKEELRKEKKQWKNKHAVNENQRPQDRSKMTMRDFIYYLPNNNPMTSSLEQEKKTEKSSTPVQTREQEGKSTPDGEDNEEIEEEMDDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKNYYSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQEKRPFDFDFFAHLLQKVLAEEEKRKQKSVKNQSSKEKSSKSRKNVKVKKVTNERVSDDPAESVSARISDAEGSQKDTQTVEEEQQSLTLSAQDSEQNVVEQDQNQKKRRRKNQGEGGKREVKSLSGNASVQPGSSKGEKHTNQSLSPEINEEGGNKEQNLPSVQNKDDIVGLSFSEKTERRTDPVLSSSGEQDDVSVAAETLESGASDLPSSEVGVRPLCEVNNAERSCTEERNVDPKNKSLETDQTENVKPMKRVRLQRPKPNLSRAVGKKTVLLQDKTDEENKSSHAETSVEKNHVEKDKTSTSDISVVENTERENPEADAVSNLSEKICLQEDDAPKVFRPARLMRGSLRRQKPNIGKAAERKGILTSQEKFGATVEKNENESGIGGDTPEQIEDQSCKNFECEDITSQSEEKDTSIQDAQSDDPKALNECPSIQEDNKANKQVPVVKTRFQKPKPNIRRTIAKRDISSKKEVPEKILASEEITAALGETASLETSPREEVPVETNTTKETESGLKETGKDSSPREKIPEMIDVTVEMETDLKETEMKDISPREKIPEMSGVTVEMETDLKETGREVFPREEEEIPKVTDATEERETDLEETVRREISLQENAPEEIDTISEVVTDLKETVREISPREKIPDIIDAAEEAETDLEESERREISTQDKVSEVKTVGDEVDSEVKEIGIEISLRENVVVGIRDTGEREVDLEETAERDFSLVEKVSGKMTAIEETEADLKETGKEIFLKKSRPEEISASEDRVADLEKIRKTDISLRENAREETGTSRQTGTDSLQSSSADCSAVPSLTNNDISSEILSVVHTAVEENRNSEKEMSSQLSHLNISLETSGLDKIEDQRMQSPDVPEQSSDINLSKSLPQEQKPSEVKPAPFLRSRFKRPKPNLARAASKREATGAEKCAPGKNMEPDKVGTVVIQPNSDQMSTLSSQHDVASLMTSREKDKSDHSQEETVILPHGQTEKELSPSSSHEPKEESQSTQAQGKELVVSIGTHDINTLERESAVQTVPPVRGRLQRPRPNLRRVGQRQVIEKSEAKETNKEEGTLQKDETKKEFLTVPNSQIAPEIEVVSSKVSEGRTCEIEVVSAKGSEGRTGENQSHVVLLENLHLNEVNALDEKTRQERKTYVPSPPRMIRRQFQKPKPNLGRAHARKEESSIEKDRADQSEARKPEDNLLQHGDSDTQFLQKEKAESLTSLKVSARKDSVGSQETGLAKKDAQSEAGPSQSVGEKTVGDDSGCSAVEEQYLSKPTRFPQLPKESNHSRIALDRRTALSSASECETDHSERRIHRRVKPNVTRGRGSKRVRSKTSKKEPRAPKAVLVTLRASQEEDEDDAEDFESDYEEESYHLAPEEVNKAPVFVPVGLRSPEPVPTQIEETMEELEITVNVPDVGCIAVVEHQLSNADVTTQEMKQEENLNASSVEMTTGEHSQDETGTNDGSTEAAITLLTMGDLVLQSEISTEQSGVGVCILPDGHSEDKSHVPFSPDNINHDIVHEHPELSSPLCSTAPSEDNKIVLEEQSTKEETGLVEEVKENAISTRTTTSEVTSSLRPRRRFAKPKPNLKKILGTKRFGAHQEVPSLSEIQGETEKNASKGTELEDKNLGSDTTAESKEQSKLACVHGIEETSNSQEARLTKRNEDHEEGSEEVQMLSAAPLVSSEPSTDTLALGTSLGESFIEEPLRKDSDGDSMLTLYVPEQCPPASIPDVQQENVNNPQDSVDLLANVHQDGEDEQAFILTLVEIPTSAVEEYADTTTQLLPNTLLPAPILVKSVNKEERGDMSVSFPVIPVDQDAVYLSGRDDSEKPPANLELLSRKRFHCSPDESDHVPPAKKNSLTSSDDCQKYTSEVCSKELINLEETGESCQGQDNFPTLGSTLTMPEPQKEQLESTFQSIGSRSPDKVTDTQEKNASELPQDEIMVSDKEERTCAASMSMDNITSSSKTPLSRPGRRPLGFLSLICSKNSLESDEPTQVHRKKRLKPLIPISRKNLQVSNPLSESQKTTPEPSDPPPSPSVVANTQSTNTGNTGSSATQVSSNPLPKEECKGGQKRVPEEEPTTISEYFFSDIFIQVDETE", "length": 2449, "header": "tr|F1SK28-1|F1SK28_PIG Isoform 1 of B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB OS=Sus scrofa OX=9823 GN=BDP1 PE=4 SV=3 CANONICAL=F1SK28-1" }, "locus": { "chromosome": "16", "start_pos": 47906698, "end_pos": 47801534, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018477.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018477.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017977.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017977.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SK28", "url": "https://www.uniprot.org/uniprotkb/F1SK28" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517687", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517687", "resource": "KEGG Pathway" }, { "id": "R-SSC-76061", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76061", "resource": "Reactome", "description": "RNA Polymerase III Transcription Initiation From Type 1 Promoter" }, { "id": "R-SSC-76066", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-76066", "resource": 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"categories": [ "Protein Classification" ] }, { "id": "PTHR12004", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12004", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12004:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12004:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00049", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00049", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001926048", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926048", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SK47", "url": "https://www.uniprot.org/uniprotkb/F1SK47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK47-1", "url": "https://www.uniprot.org/uniprotkb/F1SK47-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPRLLGLCVLWLGLPLVRFSRELNDISRARKLCGRHLLKEIVRLCGNVSWSQFEEENPLTHLLSQAEQVETFIPDRLESSQTTFSVWGRGSRQVSTSASQEEAINNLKMKSLHEYQYKKANLPFKTRQEIFSSTQDINPYIREIVEFQKKNTNNFKTLSNLFWGYHPQRKRRGYSEKCCLKGCTKEELSIACLPYIDYKNLKKEASAIVTEIY", "length": 213, "header": "tr|F1SK47-1|F1SK47_PIG Isoform 1 of Insulin like 6 OS=Sus scrofa OX=9823 GN=INSL6 PE=3 SV=2 CANONICAL=F1SK47-1" }, "isoforms": [ { "isoform_ac": "F1SK47-1", "url": "https://www.uniprot.org/uniprotkb/F1SK47/entry#F1SK47-1", "sequence": { "sequence": "MPRLLGLCVLWLGLPLVRFSRELNDISRARKLCGRHLLKEIVRLCGNVSWSQFEEENPLTHLLSQAEQVETFIPDRLESSQTTFSVWGRGSRQVSTSASQEEAINNLKMKSLHEYQYKKANLPFKTRQEIFSSTQDINPYIREIVEFQKKNTNNFKTLSNLFWGYHPQRKRRGYSEKCCLKGCTKEELSIACLPYIDYKNLKKEASAIVTEIY", "length": 213, "header": "tr|F1SK47-1|F1SK47_PIG Isoform 1 of Insulin like 6 OS=Sus scrofa OX=9823 GN=INSL6 PE=3 SV=2 CANONICAL=F1SK47-1" }, "locus": { "chromosome": "1", "start_pos": 216819835, "end_pos": 216792827, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005747.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005747.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005605.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005605.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SK47", "url": "https://www.uniprot.org/uniprotkb/F1SK47" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100158105", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100158105", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q32L79-1", "protein_name": "Insulin-like peptide INSL6", "gene_name": "INSL6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPRFLYLCLGLLLVRVSRELNDISRARRLCGQHLLHEIVKLCGDVNWSHVEKEKPFTQLLSQASEKVESFIPDRSESSQTTFPVWRRATNPVPTSASQEEAINNMKMQSLPEYQYKKANLPFKTRQEESSSSQDISPYIHEIIEFQKKNTNKIKTLSNLFWGNHPQRKRRGYSEKCCQKGCTKEELIIACLPYIDYENLRKHQQL", "length": 205 }, "evidence": [ { "id": "F1SK47", "url": "https://omabrowser.org/oma/group/F1SK47/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9QY05-1", "protein_name": "Insulin-like peptide INSL6", "gene_name": 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"evidence": [ { "database": "UniProtKB", "id": "F1SK78", "url": "https://www.uniprot.org/uniprotkb/F1SK78" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC77", "url": "https://www.uniprot.org/uniprotkb/F1SK78", "locus": { "chromosome": "5", "start_pos": 67760049, "end_pos": 67725834, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000751", "url": "https://www.ensembl.org/id/ENSSSCG00000000751" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000751", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000751", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513353", "url": "https://www.ncbi.nlm.nih.gov/gene/100513353", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR037696", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037696", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513353", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513353", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HLSHMYR", "url": "https://omabrowser.org/oma/group/HLSHMYR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SK78", "url": "https://www.orthodb.org/?gene=F1SK78", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22091", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22091", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22091:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22091:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_020948147", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020948147", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SK78", "url": "https://www.uniprot.org/uniprotkb/F1SK78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK78-1", "url": "https://www.uniprot.org/uniprotkb/F1SK78-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNFTPTQSPVYRKLTTVSKHEAASGISSPTRWKGVSFSDSVQSTPLPSVKDRLAVLCPSQELLEYYQKKMSECEAENQGLLQKLELYKEACEGQHKLEWDLQQREKEIAELQKALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDSGEVTYFYKEPPNKVSILQKNIQTIEMCEQNESSALRADSKGSRRKPAMKEKEERAEQQQRDVQTLILQVEALQAQLEEQTRLSREQVSGLMEERRIHMDEVQVHHQRYRDRITELTKSLHHTQELLYESTKDFLQLKFENQNKETSWMLEKDHLMSKIKQYRVQCKKREDKLGKVWPIHENHHNQNEYIKSLKDKIVQEKRLSNMYQEQCISLEEELARIREEEGVRREIFKDRTNKMGKRLQVMTKRYEALENRRALEVEGFKTDIKVLRQKLRDLEQMLYKATLNARANQDLAILYEVRDSNRRAHKIQGELKNLKSKVFGLENELRLC", "length": 492, "header": "tr|F1SK78-1|F1SK78_PIG Isoform 1 of Coiled-coil domain containing 77 OS=Sus scrofa OX=9823 GN=CCDC77 PE=4 SV=3 CANONICAL=F1SK78-1" }, "isoforms": [ { "isoform_ac": "F1SK78-1", "url": "https://www.uniprot.org/uniprotkb/F1SK78/entry#F1SK78-1", "sequence": { "sequence": "MNFTPTQSPVYRKLTTVSKHEAASGISSPTRWKGVSFSDSVQSTPLPSVKDRLAVLCPSQELLEYYQKKMSECEAENQGLLQKLELYKEACEGQHKLEWDLQQREKEIAELQKALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDSGEVTYFYKEPPNKVSILQKNIQTIEMCEQNESSALRADSKGSRRKPAMKEKEERAEQQQRDVQTLILQVEALQAQLEEQTRLSREQVSGLMEERRIHMDEVQVHHQRYRDRITELTKSLHHTQELLYESTKDFLQLKFENQNKETSWMLEKDHLMSKIKQYRVQCKKREDKLGKVWPIHENHHNQNEYIKSLKDKIVQEKRLSNMYQEQCISLEEELARIREEEGVRREIFKDRTNKMGKRLQVMTKRYEALENRRALEVEGFKTDIKVLRQKLRDLEQMLYKATLNARANQDLAILYEVRDSNRRAHKIQGELKNLKSKVFGLENELRLC", "length": 492, "header": "tr|F1SK78-1|F1SK78_PIG Isoform 1 of Coiled-coil domain containing 77 OS=Sus scrofa OX=9823 GN=CCDC77 PE=4 SV=3 CANONICAL=F1SK78-1" }, "locus": { "chromosome": "5", "start_pos": 67755505, "end_pos": 67728771, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000815.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000815.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000799.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000799.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SK78", "url": "https://www.uniprot.org/uniprotkb/F1SK78" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513353", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513353", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M6YYE2-1", "protein_name": "Coiled-coil domain-containing protein 77 isoform X1", "gene_name": "ccdc77", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDSPPTKDHKSPSPDSPLPSISERLAYLRPSRELLDFYRQKVSQFDGEHEELLQKLEEHRSSTEEQHKLQWEIRQREEEIAELQNALSDMQIYLFQEREQALRLYAENDRLKIRELEDRKKIQHLLALVGPDPGEITYFHREPPHKVTIPQKKIQPRSHEELKMVKPRPVSAKGNKKSSKHGENSTDAEQQKRDNQTLLLQVEALQAQMEEQARLAKEQVEALMEERRIHLEERQIQQQRDSDRITALTDKLQCTQSLLMESTRDFLQLKFESRAQEKSWMMEKERLLRRLDCSEEREERAPSAELQIIQQSPADSGATHRQHIRALQEELKQAHKLADMYRDQCVSLETELSQIREEGDVGREIFKERSDKMAKRLQLMTRRYEALEKRRVMEVEGFKTDIRLLRQKVKDVEKILFKLTLGGSPKQDLAILREVRQTNRRTEKVQDQLKNLKTKICKLENELQFC", "length": 466 }, "evidence": [ { "id": "F1SK78", "url": "https://omabrowser.org/oma/group/F1SK78/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0YGZ6-1", "protein_name": "Coiled-coil domain containing 77", "gene_name": "CCDC77", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSATGGSAGRSSRSRRSRHYKVFVRSMLATPHSSSRHSSSQPQSQGDSTPLPSINERLAFLRPSRELLEYYRKKIADFDEEHEDLVKRLERYKETYDEQHKLQWEVRQREEEIAELQKALSDMQVYLFQEREHVLRLYSENDRLKIRELEDRKKIQHLLALVGTDAGEVTYFHKEPPHKVTVLQRPARSRDSHDGKDSSGTGTKRSTSKQAGKGDIHESPERYQRDNQTLLLQVEALQAQIEEQTQLSKEQLQALLEDRRIHMEEAQLQHQRDQDKIKTLTDKLNKTQNLLYESTRDFLQLKSDVRASEKAWMVEKENLLRKIGKDSDQLIGRETEREKKQRDTKKMLQAEREAGKPHSRDVKTLQEELMQEQRLSNMYREQCITLESELARISEERDVGRELFKARSEKMGKRLKLVTQRYEALEKRRNMEVEGFKNDLKQLRQKLKDVEKQLFKVTLNIGPDQDLAILNEVRQGNRLTRKIQEELKYLKAKIYGLENELRVC", "length": 504 }, "evidence": [ { "id": "F1SK78", "url": "https://omabrowser.org/oma/group/F1SK78/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZHU5-1", "protein_name": "Coiled-coil domain containing 77", "gene_name": "Ccdc77", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNFTPTHTPICRKITVASRRGAGSGFDDTNRWKKMADSVESTPLPSIEDRLAVLRPSQELLEYYQKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQREGEIAELQRALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFLKEPPHKASILQKTIQAVDVCEPSASKADPTVSKRRIRVKDKEDISERYQRDIQTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEEIQVQHQRNQEKIKELTKSLHHTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQYRKKEDKLGKVVPTLHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVRREIFKDRSNKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGNQDLAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC", "length": 488 }, "evidence": [ { "id": "F1SK78", "url": "https://omabrowser.org/oma/group/F1SK78/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3H881-1", "protein_name": "Coiled-coil domain-containing protein 77 isoform X1", "gene_name": "Ccdc77", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNFTPTHTPVCRKITTASKRGSACGFSDPNRWKKMADSVESTPLPSTEDRLAVLCPSQELLEYYQKKMADCETENEDLLKKLDLYRESCEGQHKLEWNLQQREEEIAELQKALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDTGEVTYFCKEPPHKVSILQKTIQAVEACEQYEPSAFKADPKESKRRATIKEKEDMCDRYQRNIHTLMLQVEALQAQLGEQTKLSREQIEGLMEDRRIRIEEIQVQHQRNQDKVKELTKSLHYTQELLYESTKDFLQLRFENQNKEKVWMLEKDHLMSKIKQYKVQCKKKEDKLGKVIPALPENHHTQNEYIKSLKDKLMQEKKLSSMYQQQCISLEEELARIREEEGVRREIFKDRSNKMGKRLQTMTKRYEALEHRRMLEVEGFKTDIKVLRQKLRDLEQMLYKATVNTRENQDLAILCEVRDSNRRAHKIQGELKALKSKVFGLENDLRLC", "length": 491 }, "evidence": [ { "id": "F1SK78", "url": "https://omabrowser.org/oma/group/F1SK78/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9BR77-1", "protein_name": "Coiled-coil domain-containing protein 77", "gene_name": "CCDC77", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNFTPTHTPVCRKRTVVSKRGVAVSGPTKRRGMADSLESTPLPSPEDRLAKLHPSKELLEYYQKKMAECEAENEDLLKKLELYKEACEGQHKLECDLQQREEEIAELQKALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDAGEVTYFCKEPPHKVTILQKTIQAVGECEQSESSAFKADPKISKRRPSRERKESSEHYQRDIQTLILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEEIQVQHQRNQNKIKELTKNLHHTQELLYESTKDFLQLRSENQNKEKSWMLEKDNLMSKIKQYRVQCKKKEDKIGKVLPVMHESHHAQSEYIKSLKDKLVQEKKLSNMYQEQCISLEEELARIREEEGMRREIFKDRTNKMGKRLQIMTKRYEALERRRILEVEGFKTDIKVLRQKLKDLEQMLYKATVNARANQDLALLCEVRDSNRRAHKIQGELKNLKSKVFGLENELRLC", "length": 488 }, "evidence": [ { "id": "F1SK78", "url": "https://omabrowser.org/oma/group/F1SK78/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CZH8-1", "protein_name": "Coiled-coil domain-containing protein 77", "gene_name": "Ccdc77", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFTPTRTPICRKISFASKRGAGSGFGDTNRWKKMADSMESTPLPSVEDRLAVLCPSQELLEYYQKKMANCESENEDLLKKLELYREACEEQHKLEWNLQQREEEIAELQKALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGPDAGEVTYFHKEPPHRVSILQKTLQAAVACEPSASKADPGVSKRQVRIKDKEGISERHQRDTEMLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRVEEIQVQHQRNQEKIMELTKSLHHTQELLYESTKDFLQLKFENQNKEKVWMLEKDHLMSKITQYRAQCKKKEDKLGKVVPILHESHHTQNEYIKSLKDKLIQEKKLSNMYQEQCISLEEELARIREEEGVRREIFKDRSNKMGKRLQIMTKRYQALEHRRALEVEGFKTDIKSLRQKLRDLEQMLYKATMNNTHGDQDLAMLCEVRDSNRRAHKIQGELKNLKSKVFGLENALRLC", "length": 489 }, "evidence": [ { "id": "F1SK78", "url": "https://omabrowser.org/oma/group/F1SK78/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "F1SK78", "url": "https://www.uniprot.org/uniprotkb/F1SK78" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 191, "end_pos": 193, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2, "end_pos": 4, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 191, "end_pos": 193 }, { "start_pos": 2, "end_pos": 4 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SK98-1", "uniprot_ac": "F1SK98", "uniprot_id": "F1SK98_PIG", "mass": { "chemical_mass": 26646.0, "monoisotopic_mass": 26646.0 }, "refseq": { "ac": "XP_003126619", "name": "nuclear receptor-interacting protein 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126619" }, "gene_names": [ { "name": "NRIP2", "type": "recommended", "evidence": [ { "id": "F1SK98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK98" } ] }, { "name": "NRIP2", "type": "synonym", "evidence": [ { "id": "XP_003126619", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126619" } ] } ], "protein_names": [ { "name": "Nuclear receptor interacting protein 2", "type": "synonym", "evidence": [ { "id": "F1SK98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK98/entry#names_and_taxonomy" } ] }, { "name": "nuclear receptor-interacting protein 2", "type": "synonym", "evidence": [ { "id": "XP_003126619", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126619" } ] } ], 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"https://www.ncbi.nlm.nih.gov/gene/100511992", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021109", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021109", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511992", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511992", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PSCWKES", "url": "https://omabrowser.org/oma/group/PSCWKES/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SK98", "url": "https://www.orthodb.org/?gene=F1SK98", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12917", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12917", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12917:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12917:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_003126619", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126619", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SK98", "url": "https://www.uniprot.org/uniprotkb/F1SK98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK98-1", "url": "https://www.uniprot.org/uniprotkb/F1SK98-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEGKAAPKPPACPAGARSTRPEAPKEAGNAGSRAQEAELLGPAQLSQQRRLRQATQFLHKDSADLLPLDSLKRLGTSKDWQPHSVIQRRLVEGSQSRPAGESPLAQALTHSQESRRRPSKTERLALLVNCKCRDQVLRVAVDTGTHYNQISAGCLSRLGLGKRVLGAPGGDLTPGPPAQVAQLELQLGQETVVCSAQVVDVERPELCLGLQTLLSLQCCIDLEHGVLRLKAPFPELPFLPLHQEPGQ", "length": 247, "header": "tr|F1SK98-1|F1SK98_PIG Isoform 1 of Nuclear receptor interacting protein 2 OS=Sus scrofa OX=9823 GN=NRIP2 PE=4 SV=2 CANONICAL=F1SK98-1" }, "isoforms": [ { "isoform_ac": "F1SK98-1", "url": "https://www.uniprot.org/uniprotkb/F1SK98/entry#F1SK98-1", "sequence": { "sequence": 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GN=TEX52 PE=4 SV=3 CANONICAL=F1SKA0-1" }, "locus": { "chromosome": "5", "start_pos": 67269945, "end_pos": 67263804, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000803.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000803.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000787.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000787.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., 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"MLSGRWWPSPWGSLRLGPRSPSQGSQLRALYAFTYTGADGRQVSLAEGERFLLLRKTNSDWWLARRLGAPSTSRPIFVPAAYMTEESSPSQSPTTGTPSRSLWTPGPKLFSGSLEELHLCQEPPDRAQLTSEHPPPLPPKMCRSVSVTNLKGTLQKPFQEGPSGRSFSQEDLLTEANDKARPQPLMSEPPVYCNLVDLRRCPRSPPPNPACPPLQRLDAWEQHLDHSSGRCFYINSLTGCKSWKPPRHTRTREMNPGSMERTQTLNRDNGVLQPQAKGSESGPGTPELFDSQASPCLRRRTSQLDPSDQPSALQFARPLPQVLDDPHEVEKSGLLNMTKIAQGGRKLRKNWAPSWVVLAGNSLVFYREPPPTAPSTLWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTVPGHEFLLQSDQETELRAWHRALREVIERLDRENPLELRLSGSGPAELGELSAGEDEEEESEPVSKPLLRLGGSRRNSSRCPEGAEQSRVRNKLKRLIAKRPPLQTLQERGLLRDQVFGCQLESLCQREGDTVPSFVRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAITSDGRYMFPEQQGQEGRLDLDSAEWDDIHVITGALKLFLRELPQPLVPPLLLPHFRAALALAESEQRLSQIQELISSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTDFTRLFP", "length": 741, "header": "tr|F1SKH5-1|F1SKH5_PIG Isoform 1 of Rho GTPase activating protein 9 OS=Sus scrofa OX=9823 GN=ARHGAP9 PE=4 SV=3 CANONICAL=F1SKH5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R720-1", "url": 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"MLSGRWWPSPWGSLRLGPRSPSQGSQLRALYAFTYTGADGRQVSLAEGERFLLLRKTNSDWWLARRLGAPSTSRPIFVPAAYMTEESSPSQSPTTGTPSRSLWTPGPKLFSGSLEELHLCQEPPDRAQLTSEHPPPLPPKMCRSVSVTNLKGTLQKPFQEGPSGRSFSQEDLLTEANDKARPQPLMSEPPVYCNLVDLRRCPRSPPPNPACPPLQRLDAWEQHLDHSSGRCFYINSLTGCKSWKPPRHTRTREMNPGSMERTQTLNRDNGVLQPQAKGSESGPGTPELFDSQASPCLRRRTSQLDPSDQPSALQFARPLPQVLDDPHEVEKSGLLNMTKIAQGGRKLRKNWAPSWVVLAGNSLVFYREPPPTAPSTLWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTVPGHEFLLQSDQETELRAWHRALREVIERLDRENPLELRLSGSGPAELGELSAGEDEEEESEPVSKPLLRLGGSRRNSSRCPEGAEQSRVRNKLKRLIAKRPPLQTLQERGLLRDQVFGCQLESLCQREGDTVPSFVRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAITSDGRYMFPEQQGQEGRLDLDSAEWDDIHVITGALKLFLRELPQPLVPPLLLPHFRAALALAESEQRLSQIQELISSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTDFTRLFP", "length": 741, "header": "tr|F1SKH5-1|F1SKH5_PIG Isoform 1 of Rho GTPase activating protein 9 OS=Sus scrofa OX=9823 GN=ARHGAP9 PE=4 SV=3 CANONICAL=F1SKH5-1" }, "locus": { "chromosome": "5", "start_pos": 22754956, "end_pos": 22747696, "strand": "+", 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Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SKH5", "url": "https://www.uniprot.org/uniprotkb/F1SKH5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" } ], "orthologs": [ { "uniprot_canonical_ac": "Q9BRR9-1", "protein_name": "Rho GTPase-activating protein 9", "gene_name": "ARHGAP9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLSSRWWPSSWGILGLGPRSPPRGSQLCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYMIEESIPSQSPTTVIPGQLLWTPGPKLFHGSLEELSQALPSRAQASSEQPPPLPRKMCRSVSTDNLSPSLLKPFQEGPSGRSLSQEDLPSEASASTAGPQPLMSEPPVYCNLVDLRRCPRSPPPGPACPLLQRLDAWEQHLDPNSGRCFYINSLTGCKSWKPPRRSRSETNPGSMEGTQTLKRNNDVLQPQAKGFRSDTGTPEPLDPQGSLSLSQRTSQLDPPALQAPRPLPQLLDDPHEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVRWVEARREAPTGRDQGSGDRENPLELRLSGSGPAELSAGEDEEEESELVSKPLLRLSSRRSSIRGPEGTEQNRVRNKLKRLIAKRPPLQSLQERGLLRDQVFGCQLESLCQREGDTVPSFLRLCIAAVDKRGLDVDGIYRVSGNLAVVQKLRFLVDRERAVTSDGRYVFPEQPGQEGRLDLDSTEWDDIHVVTGALKLFLRELPQPLVPPLLLPHFRAALALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLFRPEQETSDPAAHALYPGQLVQLMLTNFTSLFP", "length": 750 }, "evidence": [ { "id": "F1SKH5", 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"label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 97, 372 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 336, "end_pos": 338 }, { "start_pos": 490, "end_pos": 492 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", 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"https://www.ncbi.nlm.nih.gov/protein/XP_020926312" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DALRD3", "url": "https://www.uniprot.org/uniprotkb/F1SKI7", "locus": { "chromosome": "13", "start_pos": 31650967, "end_pos": 31656306, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011370", "url": "https://www.ensembl.org/id/ENSSSCG00000011370" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011370", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011370", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525127", "url": "https://www.ncbi.nlm.nih.gov/gene/100525127", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009080", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009080", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037380", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037380", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IFVMYNC", "url": "https://omabrowser.org/oma/group/IFVMYNC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR16043", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16043", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16043:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16043:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05746", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05746", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26758", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26758", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020926312", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926312", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKI7-1", "url": "https://www.uniprot.org/uniprotkb/F1SKI7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTGVDVGEPRLWPSLGSQGPQPNPRPNQLPLPEVRPQYFRFCLFLPVAMSMGRLGVEETLAALNAALGPGGPVWYKETRARHLRARDFLAPRRALQARFEEGQVPKQVIHAIAGLQGPGVAPVLRCAPTPAGLALQLQRSAVFERVLGAVATYVAPAAHAALEPRVVLHCPALRGRPCALRLSQLRAVLVADHLARALHAHRVSVRLVPAVRDPHMLTFLQQLRVEWPAASGRARTVTEALRSRALAELTPAHDSGALPPGALGQVCLKELVDERGRRAGYDPNLDSCLVTEELLSLLAELQEAVQHWPEHSSLGLAAVSDTGADGCVVVHVVSCEEEFQQQKLDLLWWKLDDQAPLRQKHLVCGPVKVAGAPGTLTAPEYYELRHMQVCKASALKYGKDLTQDPAWTEIFRVLCVATIKFEMLSTAPQNQLLLALADNSISTKGTKSGTFVMYNCARLATLFEGYRCSVEKGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSHTGMLACTAPGLHITARTEMVCKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFARLQLLQAVSDVLHTGLAMLGLPPLSHI", "length": 592, "header": "tr|F1SKI7-1|F1SKI7_PIG Isoform 1 of DALR anticodon binding domain containing 3 OS=Sus scrofa OX=9823 GN=DALRD3 PE=4 SV=2 CANONICAL=F1SKI7-1" }, "isoforms": [ { "isoform_ac": "F1SKI7-1", "url": "https://www.uniprot.org/uniprotkb/F1SKI7/entry#F1SKI7-1", "sequence": { "sequence": "MTGVDVGEPRLWPSLGSQGPQPNPRPNQLPLPEVRPQYFRFCLFLPVAMSMGRLGVEETLAALNAALGPGGPVWYKETRARHLRARDFLAPRRALQARFEEGQVPKQVIHAIAGLQGPGVAPVLRCAPTPAGLALQLQRSAVFERVLGAVATYVAPAAHAALEPRVVLHCPALRGRPCALRLSQLRAVLVADHLARALHAHRVSVRLVPAVRDPHMLTFLQQLRVEWPAASGRARTVTEALRSRALAELTPAHDSGALPPGALGQVCLKELVDERGRRAGYDPNLDSCLVTEELLSLLAELQEAVQHWPEHSSLGLAAVSDTGADGCVVVHVVSCEEEFQQQKLDLLWWKLDDQAPLRQKHLVCGPVKVAGAPGTLTAPEYYELRHMQVCKASALKYGKDLTQDPAWTEIFRVLCVATIKFEMLSTAPQNQLLLALADNSISTKGTKSGTFVMYNCARLATLFEGYRCSVEKGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSHTGMLACTAPGLHITARTEMVCKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFARLQLLQAVSDVLHTGLAMLGLPPLSHI", "length": 592, "header": "tr|F1SKI7-1|F1SKI7_PIG Isoform 1 of DALR anticodon binding domain containing 3 OS=Sus scrofa OX=9823 GN=DALRD3 PE=4 SV=2 CANONICAL=F1SKI7-1" }, "locus": { "chromosome": "13", "start_pos": 31655370, "end_pos": 31651027, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012448.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012448.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012123.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012123.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 129, "start_aa": "Thr", "end_pos": 129, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr129", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7H026-1", "protein_name": "DALR anticodon-binding domain-containing protein 3 isoform X1", "gene_name": "Dalrd3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MATGRLGVGETLEALNAAVGPGSPVWFKETNARHLRVRDFLAPRSALQARFRDGQVPERVFSAVTCLQGPGVAPVLRCAPTPAGLSLQLQRPAVFERVLGALASYATPAKPASPGPRLVLHCPALRCNPSALRLSQLRAVLVADHLTRTLRAHGVCVRSVPSVRDPHMATFLQKLRVDWPTASKSTSTETLRTCVLAELNSVSEEETLPPGVLGRLCLKELVQRRPVAGYDPGIDNCLVTEDMLSVLSELQEAVHHWPEGGYPGLDGDPDSGVEGCMVVHVVSCEEAFQQQKLDLLWQKLDDQAPHKQKHLVCGPVKVAGVPGTQMTAPEYYELRYAQVCKASALKHGGDLAQDPAWTKNFDVLSVATIKFEMLSTAPQNQLLLADSTISTKGTKSGTFVMYNCARLATLFEGYKQGMERGLYPAFPLVSSLDFSLLHDEGEWLLLFNSVLPFLDLLSQSVSLASTPGLHITVRTEMVCKFLVQLSMDFSSYYNRVHILGVSIQQKGVCGECGGHRIKTGRQEDKPGSFSFRNLGHTSLVRCLPAYSY", "length": 548 }, "evidence": [ { "id": "F1SKI7", "url": "https://omabrowser.org/oma/group/F1SKI7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BGI8-1", "protein_name": "DALR anticodon binding domain containing 3", "gene_name": "DALRD3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLGVEETLGALNSALGPGGPVWFKETHARHLRARDFLAPRRALQARFGDDQVPEGVVHAIVGLQGPGVAPVLCCAPTPAGLALRLQRSVVFERVLCSVAAYAAPAAPTAPTPRIVLHCPALRGSPSALRLSQLRAVIVADHLARILQAHRVSVRRVPAVRDPHMTAFLQQLRVDWPEVSEKASTEALRNRAIAELSPAGYAGALPPGTLGRVCLKELMEERGRTAGYDPNVDSCLVTEDLLSLLAELQEAVQAGAVGSSLGLAAAPDAGADSYVVLHVVSCEEEFQQQKLDLLWWKLDHQAPLSQKHLVCGPVKVAGAPSTLTAPEYYELRHTQVCKVSSLKHGKDLEQDAAWTDIFRVLSVATVKFEMLSTAPQSQLLLALADSSISTKGSKSGTFVMYNCARLATLFEGYKCSVEQGLYPTFPPVSSLDFSLLRDEGEWLLLFNSILPFSDLLRQMAALTLTRTAPGLHVTARTETVCKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFARLQLLRAVREVLHAGLAMLGLPPLSHI", "length": 541 }, "evidence": [ { "id": "F1SKI7", "url": "https://omabrowser.org/oma/group/F1SKI7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5D0E6-1", "protein_name": "DALR anticodon-binding domain-containing protein 3", "gene_name": "DALRD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATRRLGVGETLGALNAALGPGGPVWIKETRTRHLRSRDFLAPHRALQARFDDGQVPEHLLHALACLQGPGVAPVLRCAPTPAGLSLQLQRSAVFERVLSAVAAYATPASPASLGQRVLLHCPALRSSPCALRLSQLRTVLVADHLARALRAHGVCVRLVPAVRDPHMLTFLQQLRVDWPAASERASSHTLRSHALEELTSANDGRTLSPGILGRLCLKELVEEQGRTAGYDPNLDNCLVTEDLLSVLAELQEALWHWPEDSHPGLAGASDTGTGGCLVVHVVSCEEEFQQQKLDLLWQKLVDKAPLRQKHLICGPVKVAGAPGTLMTAPEYYEFRHTQVCKASALKHGGDLAQDPAWTEIFGVLSVATIKFEMLSTAPQSQLFLALADSSISTKGTKSGTFVMYNCARLATLFESYKCSMEQGLYPTFPPVSSLDFSLLHDEGEWLLLFNSILPFPDLLSRTAVLDCTAPGLHIAVRTEMICKFLVQLSMDFSSYYNRVHILGEPRPHLFGQMFVRLQLLRAVREVLHTGLAMLGLPPLSHI", "length": 543 }, "evidence": [ { "id": "F1SKI7", "url": "https://omabrowser.org/oma/group/F1SKI7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" } ], "pmid": "" }, { "name": "tRNA binding", "id": "GO:0000049", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000049", "evidence": [ { "database": "UniProtKB", "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" } ], "pmid": "" }, { "name": "arginine-tRNA ligase activity", "id": "GO:0004814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004814", "evidence": [ { "database": "UniProtKB", "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "arginyl-tRNA aminoacylation", "id": "GO:0006420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006420", "evidence": [ { "database": "UniProtKB", "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" } ], "pmid": "" }, { "name": "tRNA C3-cytosine methylation", "id": "GO:0106217", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106217", "evidence": [ { "database": "UniProtKB", "id": "F1SKI7", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SKI7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKI7" }, { "id": "SM00836", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00836" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DALR anticodon binding", "eco_id": "ECO_0000259", "start_pos": 452, "end_pos": 592, "start_aa": "Val", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 129 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SKL4-1", "uniprot_ac": "F1SKL4", "uniprot_id": "F1SKL4_PIG", "mass": { "chemical_mass": 89742.0, "monoisotopic_mass": 89742.0 }, "refseq": { "ac": "XP_005663861", "name": "protein phosphatase 1 regulatory subunit 29", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663861" }, "gene_names": [ { "name": "ELFN2", "type": "recommended", "evidence": [ { "id": "F1SKL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKL4" } ] }, { "name": "ELFN2", "type": "synonym", "evidence": [ { "id": "XP_005663861", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663861" } ] } ], "protein_names": [ { "name": "Extracellular leucine rich repeat and fibronectin type III domain containing 2", "type": "synonym", "evidence": [ { "id": "F1SKL4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKL4/entry#names_and_taxonomy" } ] }, { "name": "protein phosphatase 1 regulatory subunit 29", "type": "synonym", "evidence": [ { "id": "XP_005663861", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663861" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SKL4", "url": "https://www.uniprot.org/uniprotkb/F1SKL4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ELFN2", "url": "https://www.uniprot.org/uniprotkb/F1SKL4", "locus": { "chromosome": "5", "start_pos": 10429478, "end_pos": 10427019, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000131", "url": "https://www.ensembl.org/id/ENSSSCG00000000131" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000131", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000131", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511563", "url": "https://www.ncbi.nlm.nih.gov/gene/100511563", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050541", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050541", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511563", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511563", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TIPHPYS", "url": "https://omabrowser.org/oma/group/TIPHPYS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SKL4", "url": "https://www.orthodb.org/?gene=F1SKL4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24369:SF204", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24369:SF204", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22986", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22986", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005663861", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663861", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SKL4", "url": "https://www.uniprot.org/uniprotkb/F1SKL4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKL4-1", "url": "https://www.uniprot.org/uniprotkb/F1SKL4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLRLGLCAAALLCVCRPGAVRADCWLIEGDKGYVWLAICSQNQPPYETIPQHINSTVHDLRLNENKLKAVLYSSLNRFGNLTDLNLTKNEISYIEDGAFLGQSSLQVLQLGYNKLSNLTEGMLRGMGRLQFLFVQHNLIEVVTPAAFSECPSLISIDLSSNRLSRLDGATFASLASLMVCELAGNPFNCECDLFGFLAWLVVFNNVTKNYDRLQCESPREFAGYPLLVPRPYHSLNAITVLQAKCRNGSLPARPASHPTPYSTDAQREPDENSGFNPDEILSVEPPASSTTDASAGPAIKLHHVTFTSATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSRRFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEKQKSAKVKKTILEMRYGADVDAGSVVHATQKLGEPPVLPVSRMSSIPSMIGEKLPTSKGLEAGLDTPKVATKGNYIEVRTGAAGDGLARPEDDLPELENGQGSAAEISTIAKEVDKVNQIINNCIDALKLDSASFLGGGSSGGDPEMAFECQSLPAASTASSAAAPGALERPSFLSPPYKESSHHPLQRQLSADAAVARKTCSVSSSGSIKSAKVFSLDVPDHPAATGLAKGDSKYIEKGSPLNSPLDRLPLVPASSSGSSTGGGVHHLEVKPAYHCSEHRHSFPALYYEEGTDSLSQRVSFLKPLTRTKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL", "length": 819, "header": "tr|F1SKL4-1|F1SKL4_PIG Isoform 1 of Extracellular leucine rich repeat and fibronectin type III domain containing 2 OS=Sus scrofa OX=9823 GN=ELFN2 PE=1 SV=1 CANONICAL=F1SKL4-1" }, "isoforms": [ { "isoform_ac": "F1SKL4-1", "url": "https://www.uniprot.org/uniprotkb/F1SKL4/entry#F1SKL4-1", "sequence": { "sequence": "MLRLGLCAAALLCVCRPGAVRADCWLIEGDKGYVWLAICSQNQPPYETIPQHINSTVHDLRLNENKLKAVLYSSLNRFGNLTDLNLTKNEISYIEDGAFLGQSSLQVLQLGYNKLSNLTEGMLRGMGRLQFLFVQHNLIEVVTPAAFSECPSLISIDLSSNRLSRLDGATFASLASLMVCELAGNPFNCECDLFGFLAWLVVFNNVTKNYDRLQCESPREFAGYPLLVPRPYHSLNAITVLQAKCRNGSLPARPASHPTPYSTDAQREPDENSGFNPDEILSVEPPASSTTDASAGPAIKLHHVTFTSATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSRRFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEKQKSAKVKKTILEMRYGADVDAGSVVHATQKLGEPPVLPVSRMSSIPSMIGEKLPTSKGLEAGLDTPKVATKGNYIEVRTGAAGDGLARPEDDLPELENGQGSAAEISTIAKEVDKVNQIINNCIDALKLDSASFLGGGSSGGDPEMAFECQSLPAASTASSAAAPGALERPSFLSPPYKESSHHPLQRQLSADAAVARKTCSVSSSGSIKSAKVFSLDVPDHPAATGLAKGDSKYIEKGSPLNSPLDRLPLVPASSSGSSTGGGVHHLEVKPAYHCSEHRHSFPALYYEEGTDSLSQRVSFLKPLTRTKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL", "length": 819, "header": "tr|F1SKL4-1|F1SKL4_PIG Isoform 1 of Extracellular leucine rich repeat and fibronectin type III domain containing 2 OS=Sus scrofa OX=9823 GN=ELFN2 PE=1 SV=1 CANONICAL=F1SKL4-1" }, "locus": { "chromosome": "5", "start_pos": 10429475, "end_pos": 10427019, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000137.3", "url": "https://www.ensembl.org/id/ENSSSCT00000000137.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000135.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000135.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SKL4", "url": "https://www.uniprot.org/uniprotkb/F1SKL4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511563", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511563", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZH36-1", "protein_name": "Extracellular leucine-rich repeat and fibronectin type III domain containing 2", "gene_name": "Elfn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLGLCAAALLCVCQPGAVHADCWLIEGDKGYVWLAICSQNQPPYETIPQHINSTVHDLRLNENKLKAVLYSSLNRFGNLTDLNLTKNEISYIEDGAFLGQTSLQVLQLGYNRLSNLTEGMLRGMSRLQFLFVQHNLIEVVTPTAFSECPSLISIDLSSNRLSRLDGATFASLASLMVCELAGNPFNCECDLFGFLAWLVVFNNVTKNYDRLQCESPREFAGYPLLVPRPYHSLNAITVLQAKCRNGSMPARPVSHPTPYSTDAQREPDENSGFNPDEILSVEPPASSTTDASAGPAIKLHQVTFTSATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSRRFNHTCLTFTTRDLVPGDQVPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEQQKSVNVKKTILEMRYGADVDAGSIVHAAQKLVEPPVLPVARMSSIPSMIGEKLPASKGLEAGLDTPKVATKGNYIEVRTGAAGDSLARPEDDLPEIENGQGSAAEISTIAKEVDKVNQIINNCIDALKLDSASFLGGGSGGGDSDLAFECQSLPAATAASSTATPGALERPSFLSPPYKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIEKGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLSQRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEAYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL", "length": 820 }, "evidence": [ { "id": "F1SKL4", "url": "https://omabrowser.org/oma/group/F1SKL4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MWA2-1", "protein_name": "Extracellular leucine rich repeat and fibronectin type III domain containing 2", "gene_name": "ELFN2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLRLGLCAAALLCVCRPGTVRADCWLIEGDKGYVWLAICSQNQPPYETIPQHINSTVHDLRLNENKLKAVLYSSLNRFGNLTDLNLTKNEISYIEDGAFLGQSSLQVLQLGYNKLSNLTEGMLRGMGRLQFLFVQHNLIEVVTPAAFSECPSLISIDLSSNRLSRLDGATFASLASLMVCELAGNPFNCECDLFGFLAWLVVFNNVTKNYDRLQCESPREFAGYPLLVPRPYHSLNAITVLQAKCRNGSLPARPASHPTPYSTDTQREPDENSGFSPDEILSVEPPASSTTDASAGPAIKLHQVTFTSATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSRRFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEKQKSVKVKKTILEMRYGADVDAGSVVHATQKLGEPPVLPVSRMSSIPSMIGEKLPTTSKGLEAGLDTPKVATKGNYIEVRTGTGSEGLARPEDDLPELENGQGSAAEISTIAKEVDKVNQIINNCIDALKLDSASFLGSGSGGGDPEMAFECQSLPAASTTSSTATPVPGVLERPSFLSPPYKEGSHHPLQRQLSADAAVARKTCSVSSSGSIKSAKVFSLDVPDHPATPGLAKGDSKYIEKGSPLNSPLDRLPLVPASSSGSSGGGGGAVHHLEVKPAYHCSEHRHSFPALYYEEGTDSLSQRVSFLKPLTRTKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL", "length": 824 }, "evidence": [ { "id": "F1SKL4", "url": "https://omabrowser.org/oma/group/F1SKL4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NE81-1", "protein_name": "Extracellular leucine rich repeat and fibronectin type III domain containing 2", "gene_name": "ELFN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKAPLKTMMCLGFWAAALLCLFSPGTVRGDCWLIEGDKGYVWLAICSQNQPPYETIPQHINSTVHDLRLNENKLKVVLYSSLNRFGNLTDLNLTKNEISYIEDGAFMGQTNLQVLQLGYNKLTNLTEGMLRGMARLQFLFVQHNLIELVTPTAFSECPSLISIDLSSNRLSRLEGNTFTSLSNLMVCELAGNPFNCDCSLYSFLNWLALFNNVTKNYDRLQCETPREFAGYPLLVPRPHHNRNAITIFQSMCRGGTIPSLSRVNPTPYTPDSQRDLDEGSAISPGDFLSVKPPASSTTDSSFSPSIKLHDVTITSAILMVTIPMPYSKMYVLVQYNNSYVSDIATLKSKKEYVTVNKLKAHTDYTFCVASIRNNRRYNHTCLTFATRSKGREDPISSTSTTTHYIMTTLGCLFGMVIVLGVVYYCLRKRRMQEEKQKSLNVKKTILEMRYGSDIDTSTMVHPSQKLGEPPVIPVSRMSSIPSMIGEKLPPPKSMETGMETPKVTTKGNYIEVRTGGGDGLERTPRDEDLRELDNGQGSAAEISTIAKEVDKVNQIINNCIDALKLDTASFLGGGTGVDSDMAFECQSIPASSSGGLERPSFLSPPYKESSHHPLQRQLSADAAVARKTCSVSSSGSIKSAKVFSLDVPDHPPLSKSDSKYIEKGSPLNSPLDRLPLVSPGAIHHLEVKPSYHCSEHRHSFPALYYEESADTLSQRVSFLKPLSRSKRDSTYSQLSPRHYFSGYSSSPEYSSESTHKIWERFRPYKKHHREEVYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL", "length": 808 }, "evidence": [ { "id": "F1SKL4", "url": "https://omabrowser.org/oma/group/F1SKL4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q5R3F8-1", "protein_name": "Protein phosphatase 1 regulatory subunit 29", "gene_name": "ELFN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLRLGLCAAALLCVCRPGAVRADCWLIEGDKGYVWLAICSQNQPPYETIPQHINSTVHDLRLNENKLKAVLYSSLNRFGNLTDLNLTKNEISYIEDGAFLGQSSLQVLQLGYNKLSNLTEGMLRGMSRLQFLFVQHNLIEVVTPTAFSECPSLISIDLSSNRLSRLDGATFASLASLMVCELAGNPFNCECDLFGFLAWLVVFNNVTKNYDRLQCESPREFAGYPLLVPRPYHSLNAITVLQAKCRNGSLPARPVSHPTPYSTDAQREPDENSGFNPDEILSVEPPASSTTDASAGPAIKLHHVTFTSATLVVIIPHPYSKMYILVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSRRFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEKQKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVSRMASIPSMIGEKLPTAKGLEAGLDTPKVATKGNYIEVRTGAGGDGLARPEDDLPDLENGQGSAAEISTIAKEVDKVNQIINNCIDALKLDSASFLGGGSSSGDPELAFECQSLPAAAAASSATGPGALERPSFLSPPYKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPAATGLAKGDSKYIEKGSPLNSPLDRLPLVPAGSGGGSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLSQRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL", "length": 820 }, "evidence": [ { "id": "F1SKL4", "url": "https://omabrowser.org/oma/group/F1SKL4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q68FM6-1", "protein_name": "Protein phosphatase 1 regulatory subunit 29", "gene_name": "Elfn2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22986" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ELFN1/ELFN2 fibronectin type-III", "eco_id": "ECO_0000259", "start_pos": 297, "end_pos": 380, "start_aa": "Pro", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 117, "end_pos": 119 }, { "start_pos": 205, "end_pos": 207 }, { "start_pos": 247, "end_pos": 249 }, { "start_pos": 329, "end_pos": 331 }, { "start_pos": 371, "end_pos": 373 }, { "start_pos": 54, "end_pos": 56 }, { "start_pos": 80, "end_pos": 82 }, { "start_pos": 85, "end_pos": 87 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": 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] }, { "uniprot_canonical_ac": "F1SKL5-1", "uniprot_ac": "F1SKL5", "uniprot_id": "F1SKL5_PIG", "mass": { "chemical_mass": 45486.0, "monoisotopic_mass": 45486.0 }, "refseq": {}, "gene_names": [ { "name": "CYTH4", "type": "recommended", "evidence": [ { "id": "F1SKL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ] } ], "protein_names": [ { "name": "Cytohesin 4", "type": "synonym", "evidence": [ { "id": "F1SKL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKL5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CYTH4", "url": "https://www.uniprot.org/uniprotkb/F1SKL5", "locus": { "chromosome": "5", "start_pos": 10489289, "end_pos": 10521735, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000130", "url": "https://www.ensembl.org/id/ENSSSCG00000000130" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000130", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000130", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00171", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00171", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd01252", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01252", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000904", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000904", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023394", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023394", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035999", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035999", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "LYNPNCK", "url": "https://omabrowser.org/oma/group/LYNPNCK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10663", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10663", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10663:SF323", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10663:SF323", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01369", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01369", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6811438", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811438", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKL5-1", "url": "https://www.uniprot.org/uniprotkb/F1SKL5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLCHPDPGELSSGETEELQRIKWHRKQLLEDIQKLKEEIADVFAQIDCFETAEESRVAQKEKELSIGRKKFNMDPVKGIQYLIEHKLLSPDVQDIAQFLYKGEGLNKTAIGTYLGERDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMETFAARYCLCNPGVFQSTDTCYVLSFSIIMLNTSLHNPNVRDRPPFERFVSMNRGINDGSDLPEEQLRNLFDSIKNEPFSIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDSCLYYFEFTTDKEPRGIIPLENLSVQKVDDPKKPFCLELYNPSCRGQKIKACKTDGDGKVVEGKHESYRISAASAEERDQWIQAIRASITRVPFYDLVSARKKKIASKQ", "length": 394, "header": "tr|F1SKL5-1|F1SKL5_PIG Isoform 1 of Cytohesin 4 OS=Sus scrofa OX=9823 GN=CYTH4 PE=4 SV=1 CANONICAL=F1SKL5-1" }, "isoforms": [ { "isoform_ac": "F1SKL5-1", "url": "https://www.uniprot.org/uniprotkb/F1SKL5/entry#F1SKL5-1", "sequence": { "sequence": "MDLCHPDPGELSSGETEELQRIKWHRKQLLEDIQKLKEEIADVFAQIDCFETAEESRVAQKEKELSIGRKKFNMDPVKGIQYLIEHKLLSPDVQDIAQFLYKGEGLNKTAIGTYLGERDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMETFAARYCLCNPGVFQSTDTCYVLSFSIIMLNTSLHNPNVRDRPPFERFVSMNRGINDGSDLPEEQLRNLFDSIKNEPFSIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDSCLYYFEFTTDKEPRGIIPLENLSVQKVDDPKKPFCLELYNPSCRGQKIKACKTDGDGKVVEGKHESYRISAASAEERDQWIQAIRASITRVPFYDLVSARKKKIASKQ", "length": 394, "header": "tr|F1SKL5-1|F1SKL5_PIG Isoform 1 of Cytohesin 4 OS=Sus scrofa OX=9823 GN=CYTH4 PE=4 SV=1 CANONICAL=F1SKL5-1" }, "locus": { "chromosome": "5", "start_pos": 10521583, "end_pos": 10491205, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000136.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000136.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000134.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000134.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6811438", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811438", "resource": "Reactome", "description": "Intra-Golgi traffic" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K0A0-1", "protein_name": "Cytohesin 4", "gene_name": "Cyth4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYVMQGSLQQPWGTEPNNPPLSPDTAELSSGEARELQQIKWHRKQLLEDIQKLKDEIADVFAQIDCFESTEESRMAQKEKEMCIGRKKFNMDPAKGIQYLTEHKLLTSDVQDIAQFLYKGEGLNKTAIGTYLGEKDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAARYCLCNPGVFRSTDTCYVLSFSVIMLNTGLHNPNVRDRPHFEHFVSMNRGINSGSDLPEEQLRNLFDSIKSEPFSIPEDDGSDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEFTTDKEPRGIIPLENLSVQKVDDPKKPFCLELYNPSCRGQKIKACKTDGDGKVVEGKHESYRISAANAEERDQWIEAIRASITRVPFYDLLSARKKKIVGKQ", "length": 411 }, "evidence": [ { "id": "F1SKL5", "url": "https://omabrowser.org/oma/group/F1SKL5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N082-1", "protein_name": "Cytohesin 4", "gene_name": "CYTH4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDLCHPDPGELSSGEAEELQQIKWHRKQLLEDIQKLKDEIADVFAQIDCFETAEESRMAQREKELCIGRKKFNMDPMKGIQYLIEHKLLTPDAQDIAQFLYKGEGLNKTAIGTYLGERDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMETFASRYCLCNPGVFQSTDTCYVLSFSIIMLNTSLHNPNVRDRPPFERFVSMNRGINGGSDLPEEQLRNLFDSIKSEPFSIPEDDGNDLTHTFFKPDREGWLLKLGGRVKTWKRRWFILTDSCLYYFEFTTDKEPRGIIPLENLSVQKVDDPKKPFCLELCNPSCRGQKIKACKTDGDGKVVEGKHESYRISASSAEERDQWIEAIRASITRVPFYDLVSARKKKIASKQ", "length": 394 }, "evidence": [ { "id": "F1SKL5", "url": "https://omabrowser.org/oma/group/F1SKL5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q80YW0-1", "protein_name": "Cytohesin-4", "gene_name": "Cyth4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDVCHTDPAELSSGEAKELQQIKWHRKQLLEDIQKLKDEIADVFAQIDCFESTEESRMAQKEKEMCIGRKKFNMDPNKGIQYLIEHKLLTSDVQDIAQFLYKGDGLNKTAIGTYLGEKDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAARYCLCNPGVFRSTDTCYVLSFSVIMLNTGLHNPNVRDRPPFERFVTMNRGINSGSDLPEEQLRNLFDSIKSEPFSIPEDDGGDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEFTTDKEPRGIIPLENLSVQKVEDPKKPFCLELYNPSCRGQKIKACKTDGDGKVVEGKHESYRISAANAEERDQWIEAIRASITRVPFYDLLSARKKKIVGK", "length": 393 }, "evidence": [ { "id": "F1SKL5", "url": "https://omabrowser.org/oma/group/F1SKL5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UIA0-1", "protein_name": "Cytohesin-4", "gene_name": "CYTH4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDLCHPEPAELSSGETEELQRIKWHRKQLLEDIQKLKDEIADVFAQIDCFESAEESRMAQKEKELCIGRKKFNMDPAKGIQYFIEHKLLTPDVQDIARFLYKGEGLNKTAIGTYLGERDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMEAFATRYCLCNPGVFQSTDTCYVLSFSIIMLNTSLHNPNVRDRPPFERFVSMNRGINNGSDLPEDQLRNLFDSIKSEPFSIPEDDGNDLTHTFFNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEFTTDKEPRGIIPLENLSVQKVDDPKKPFCLELYNPSCRGQKIKACKTDGDGRVVEGKHESYRISATSAEERDQWIESIRASITRVPFYDLVSTRKKKIASKQ", "length": 394 }, "evidence": [ { "id": "F1SKL5", "url": "https://omabrowser.org/oma/group/F1SKL5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ], "pmid": "" }, { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ], "pmid": "" }, { "name": "regulation of ARF protein signal transduction", "id": "GO:0032012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032012", "evidence": [ { "database": "UniProtKB", "id": "F1SKL5", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 107, "end_pos": 109, "annotation": "n_glycosylation_sequon" }, { "start_pos": 196, "end_pos": 198, "annotation": "n_glycosylation_sequon" }, { "start_pos": 307, "end_pos": 309, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SKL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 259, "end_pos": 375, "start_aa": "Asn", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SKL5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKL5" }, { "id": "PS50190", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50190" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SEC7", "eco_id": "ECO_0000259", "start_pos": 54, "end_pos": 241, "start_aa": "Glu", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 107, "end_pos": 109 }, { "start_pos": 196, "end_pos": 198 }, { "start_pos": 307, "end_pos": 309 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SKM0-1", "uniprot_ac": "F1SKM0", "uniprot_id": "F1SKM0_PIG", "mass": { "chemical_mass": 52698.0, "monoisotopic_mass": 52698.0 }, "refseq": {}, "gene_names": [ { "name": "UQCRC1", "type": "recommended", "evidence": [ { "id": "F1SKM0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKM0" } ] } ], "protein_names": [ { "name": "Cytochrome b-c1 complex subunit 1, mitochondrial", "type": "recommended", "evidence": [ { "id": "F1SKM0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#names_and_taxonomy" } ] }, { "name": "Complex III subunit 1", "type": "synonym", "evidence": [ { "id": "F1SKM0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#names_and_taxonomy" } ] }, { "name": "Core protein I", "type": "synonym", "evidence": [ { "id": "F1SKM0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#names_and_taxonomy" } ] }, { "name": "Ubiquinol-cytochrome-c reductase complex core protein 1", "type": "synonym", "evidence": [ { "id": "F1SKM0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SKM0", "url": "https://www.uniprot.org/uniprotkb/F1SKM0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UQCRC1", "url": "https://www.uniprot.org/uniprotkb/F1SKM0", "locus": { "chromosome": "13", "start_pos": 31298449, "end_pos": 31309516, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011356", "url": "https://www.ensembl.org/id/ENSSSCG00000011356" } ] } } ], "crossref": [ { "id": "F1SKM0", "url": "https://alphafold.ebi.ac.uk/entry/F1SKM0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011356", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011356", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156879", "url": "https://www.ncbi.nlm.nih.gov/gene/100156879", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "5GUP", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=5GUP&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "8IOG", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=8IOG&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "IPR007863", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007863", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011249", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011249", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050361", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050361", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156879", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156879", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SKM0", "url": "https://www.orthodb.org/?gene=F1SKM0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11851", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11851", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11851:SF116", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11851:SF116", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "pdb_00005gup", "url": "https://www.rcsb.org/structure/pdb_00005gup", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "pdb_00008iog", "url": "https://www.rcsb.org/structure/pdb_00008iog", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "5GUP", "url": "https://www.rcsb.org/structure/5GUP", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "8IOG", "url": "https://www.rcsb.org/structure/8IOG", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "PF00675", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00675", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05193", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05193", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-611105", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-611105", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9865881", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9865881", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287A558", "url": "https://www.uniprot.org/uniprotkb/A0A287A558", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A558-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A558-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJH5", "url": "https://www.uniprot.org/uniprotkb/A0A287AJH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AJH5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BHP7", "url": "https://www.uniprot.org/uniprotkb/A0A287BHP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BHP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BHP7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKM0", "url": "https://www.uniprot.org/uniprotkb/F1SKM0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKM0-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASAVCRVAGTGSRVLLRTCRSPALLRSPALRGTATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYENEKNNGAGYFVEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDSSMRDVVFDYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYVSQHYKAPRMVLAAAGGVEHRQLLDLAQKHFSSLSGTYVEDAVPAFTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVPLQVANAIIGHYDSTYGGGTHMSSTLASVAATRKLCQSFQTFNICYAETGLLGAHFVCDNMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF", "length": 480, "header": "tr|F1SKM0-1|F1SKM0_PIG Isoform 1 of Cytochrome b-c1 complex subunit 1, mitochondrial OS=Sus scrofa OX=9823 GN=UQCRC1 PE=1 SV=3 CANONICAL=F1SKM0-1" }, "isoforms": [ { "isoform_ac": "A0A287A558-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#A0A287A558-1", "sequence": { "sequence": "MAASAVCRVAGTGSRVLLRTCRSPALLRSPALRGTATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYENEKNNGAGYFVEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDSSMRDVVFDYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYVSQHYKAPRMVLAAAGGVEHRQLLDLAQKHFSSLSGTYVEDAVPAFTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVPLQVANAIIGHYDSTYGGGTVSAGVGMGSDLVFREERELGCGCLCCGVWAWAIDRRVGADHPHPWQHMSSTLASVAATRKLCQSFQTFNICYAETGLLGAHFVCDNMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF", "length": 526, "header": "tr|A0A287A558-1|A0A287A558_PIG Computationally mapped isoform of Cytochrome b-c1 complex subunit 1, mitochondrial OS=Sus scrofa OX=9823 GN=UQCRC1 PE=1 SV=2 CANONICAL=F1SKM0-1" }, "locus": { "chromosome": "13", "start_pos": 31308655, "end_pos": 31298575, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044957.2", "url": "https://www.ensembl.org/id/ENSSSCT00000044957.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039094.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039094.2" } ] } }, { "isoform_ac": "A0A287AJH5-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#A0A287AJH5-1", "sequence": { "sequence": "MAASAVCRVAGTGSRVLLRTCRSPALLRSPALRGTATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYENEKNNGAGYFVEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDSSMRDVVFDYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYVSQHYKAPRMVLAAAGGVEHRQLLDLAQKHFSSLSGTYVEDAVPAFTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVPLQVANAIIGHYDSTYGGGTVSAGVGMGSDLVFREERELGCGCLCCGVWAWAIDRRVGADHPHPWQHMSSTLASVAATRKLCQSFQTFNICYAETGLLGAHFVCDNMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGESCSPVARDEGVLAVTVPVWPPLPTKIGKGSIQEFPSWLRVRSLPLLSGLTIRRCRELWCRLQTRLGSRVAVALA", "length": 526, "header": "tr|A0A287AJH5-1|A0A287AJH5_PIG Computationally mapped isoform of Ubiquinol-cytochrome c reductase core protein 1 OS=Sus scrofa OX=9823 GN=UQCRC1 PE=1 SV=3 CANONICAL=F1SKM0-1" }, "locus": { "chromosome": "13", "start_pos": 31308655, "end_pos": 31299948, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056327.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056327.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044167.3", "url": "https://www.ensembl.org/id/ENSSSCP00000044167.3" } ] } }, { "isoform_ac": "A0A287BHP7-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#A0A287BHP7-1", "sequence": { "sequence": "MAASAVCRVAGTGSRVLLRTCRSQPALLRSPALRGTATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTEQMLSCDVGVWIDAGSRYENEKNNGAGYFVEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDSSMRDVVFDYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYVSQHYKAPRMVLAAAGGVEHRQLLDLAQKHFSSLSGTYVEDAVPAFTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVPLQVANAIIGHYDSTYGGGTVSAGVGMGSDLVFREERELGCGCLCCGVWAWAIDRRVGADHPHPWQHMSSTLASVAATRKLCQSFQTFNICYAETGLLGAHFVCDNMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF", "length": 534, "header": "tr|A0A287BHP7-1|A0A287BHP7_PIG Computationally mapped isoform of Cytochrome b-c1 complex subunit 1, mitochondrial OS=Sus scrofa OX=9823 GN=UQCRC1 PE=1 SV=1 CANONICAL=F1SKM0-1" }, "locus": { "chromosome": "13", "start_pos": 31308655, "end_pos": 31298575, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056985.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056985.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055886.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055886.1" } ] } }, { "isoform_ac": "F1SKM0-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM0/entry#F1SKM0-1", "sequence": { "sequence": "MAASAVCRVAGTGSRVLLRTCRSPALLRSPALRGTATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYENEKNNGAGYFVEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDSSMRDVVFDYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYVSQHYKAPRMVLAAAGGVEHRQLLDLAQKHFSSLSGTYVEDAVPAFTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVPLQVANAIIGHYDSTYGGGTHMSSTLASVAATRKLCQSFQTFNICYAETGLLGAHFVCDNMSIDDMMFFLQGQWMRLCTSATESEVVRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREVCSKYFYDQCPAVAGLGPIEQLPDYNRIRSGMFWLRF", "length": 480, "header": "tr|F1SKM0-1|F1SKM0_PIG Isoform 1 of Cytochrome b-c1 complex subunit 1, mitochondrial OS=Sus scrofa OX=9823 GN=UQCRC1 PE=1 SV=3 CANONICAL=F1SKM0-1" }, "locus": { "chromosome": "13", "start_pos": 31308655, "end_pos": 31298575, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012433.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012433.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012109.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012109.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "Structure of Mammalian Respiratory Supercomplex I1III2IV1.", "journal": "Cell", "date": "2016", "authors": "Wu Meng, Gu Jinke, Guo Runyu, Huang Yushen, Yang Maojun", "evidence": [ { "database": "UniProtKB", "id": "F1SKM0", "url": "https://www.uniprot.org/uniprotkb/F1SKM0" } ], "reference": [ { "type": "PubMed", "id": "27912063", "url": "https://glygen.org/publication/PubMed/27912063" } ] }, { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SKM0", "url": "https://www.uniprot.org/uniprotkb/F1SKM0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156879", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156879", "resource": "KEGG Pathway" }, { "id": "R-SSC-611105", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-611105", "resource": "Reactome", "description": "Respiratory electron transport" }, { "id": "R-SSC-9865881", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9865881", "resource": "Reactome", "description": "Complex III assembly" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular 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"https://www.uniprot.org/uniprotkb/F1SKM0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1SKM0", "url": "https://www.uniprot.org/uniprotkb/F1SKM0" } ], "pmid": "" }, { "name": "ubiquitin protein ligase binding", "id": "GO:0031625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031625", "evidence": [ { "database": "UniProtKB", "id": "F1SKM0", "url": "https://www.uniprot.org/uniprotkb/F1SKM0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "respiratory electron transport chain", "id": "GO:0022904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022904", "evidence": [ { "database": "UniProtKB", "id": "F1SKM0", "url": "https://www.uniprot.org/uniprotkb/F1SKM0" } ], "pmid": "" }, { "name": "protein processing involved in protein targeting to mitochondrion", 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"url": "https://www.uniprot.org/uniprotkb/F1SKM5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC51", "url": "https://www.uniprot.org/uniprotkb/F1SKM5", "locus": { "chromosome": "13", "start_pos": 31143480, "end_pos": 31153563, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011350", "url": "https://www.ensembl.org/id/ENSSSCG00000011350" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011350", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011350", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100521222", "url": "https://www.ncbi.nlm.nih.gov/gene/100521222", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR037660", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037660", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A287BGX6", "url": "https://www.orthodb.org/?gene=A0A287BGX6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SKM5", "url": "https://www.orthodb.org/?gene=F1SKM5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28624", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28624", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28624:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28624:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_003132231", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132231", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BGX6", "url": "https://www.uniprot.org/uniprotkb/A0A287BGX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGX6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BH66", "url": "https://www.uniprot.org/uniprotkb/A0A287BH66", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BH66-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BH66-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKM5", "url": "https://www.uniprot.org/uniprotkb/F1SKM5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKM5-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGDCLSCADLLMTGCSPVFAMQHVVGVSPILVRRGLLGKDLFMTRTLCSPGPSQPKEKRPEEVALGLYHRLTALGGVLGHSIRQQASSTAKAWWDRYEEFVGLSEVREAQGNVTEAEKVFMVARGLVREAREDLEGQQAKLKEVRDRLDRISRDDNQYLELATLEHRMLQEEKRLRMTYLRAEDSEREKFSLFSAAVRESHEKERTRAERTKNWSLIGSVLGALIGVAGSTYVNRVRLQELKALLLEAQKGPVSLQEAIREQASSYSLQQRDLRDLMADLRGLVQAGPGQSSLSQAGTSPTHDRDTGVLSAALKEQLSHSRQVHSCLEALREQLDGLEKTFSQMAGVVQLAKAAAHPGMAEPGDGPLPGSLLEQGSVILALSDTEQRLQAQVNRNTICGTLVTCMTFVAILPVLYTLFRAS", "length": 421, "header": "tr|F1SKM5-1|F1SKM5_PIG Isoform 1 of Coiled-coil domain containing 51 OS=Sus scrofa OX=9823 GN=CCDC51 PE=1 SV=2 CANONICAL=F1SKM5-1" }, "isoforms": [ { "isoform_ac": "A0A287BGX6-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM5/entry#A0A287BGX6-1", "sequence": { "sequence": "MVARGLVREAREDLEGQQAKLKEVRDRLDRISRDDNQYLELATLEHRMLQEEKRLRMTYLRAEDSEREKFSLFSAAVRESHEKERTRAERTKNWSLIGSVLGALIGVAGSTYVNRVRLQELKALLLEAQKGPVSLQEAIREQASSYSLQQRDLRDLMADLRGLVQAGPGQSSLSQAGTSPTHDRDTGVLSAALKEQLSHSRQVHSCLEALREQLDGLEKTFSQMAGVVQLAKAAAHPGMAEPGDGPLPGSLLEQGSVILALSDTEQRLQAQVNRNTICGTLVTCMTFVAILPVLYTLFRAS", "length": 301, "header": "tr|A0A287BGX6-1|A0A287BGX6_PIG Computationally mapped isoform of Coiled-coil domain containing 51 OS=Sus scrofa OX=9823 GN=CCDC51 PE=1 SV=2 CANONICAL=F1SKM5-1" }, "locus": { "chromosome": "13", "start_pos": 31145187, "end_pos": 31143731, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102538.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102538.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080838.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080838.1" } ] } }, { "isoform_ac": "A0A287BH66-1", "url": "https://www.uniprot.org/uniprotkb/F1SKM5/entry#A0A287BH66-1", "sequence": { "sequence": "SSAFLSYLLMTGCSPVFAMQHVVGVSPILVRRGLLGKDLFMTRTLCSPGPSQPKEKRPEEVALGLYHRLTALGGVLGHSIRQQASSTAKAWWDRYEEFVGLSEVREAQGNVTEAEKVFMVARGLVREAREDLEGQQAKLKEVRDRLDRISRDDNQYLELATLEHRMLQEEKRLRMTYLRAEDSEREKFSLFSAAVRESHEKERTRAERTKNWSLIGSVLGALIGVAGSTYVNRVRLQELKALLLEAQKGPVSLQEAIREQASSYSLQQRDLRDLMADLRGLVQAGPGQSSLSQAGTSPTHDRDTGVLSAALKEQLSHSRQVHSCLEALREQLDGLEKTFSQMAGVVQLAKAAAHPGMAEPGDGPLPGSLLEQGSVILALSDTEQRLQAQVNRNTICGTLVTCMTFVAILPVLYTLFRAS", "length": 419, "header": "tr|A0A287BH66-1|A0A287BH66_PIG Computationally mapped isoform of Coiled-coil domain containing 51 OS=Sus scrofa OX=9823 GN=CCDC51 PE=1 SV=1 CANONICAL=F1SKM5-1" }, "locus": { "chromosome": "13", "start_pos": 31146884, "end_pos": 31143731, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { 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"url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#names_and_taxonomy" } ] }, { "name": "Densin-180-like protein", "type": "synonym", "evidence": [ { "id": "F1SKS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#names_and_taxonomy" } ] }, { "name": "Erbb2-interacting protein", "type": "synonym", "evidence": [ { "id": "F1SKS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#names_and_taxonomy" } ] }, { "name": "Protein LAP2", "type": "synonym", "evidence": [ { "id": "F1SKS3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#names_and_taxonomy" } ] }, { "name": "erbin isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020932450", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932450" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ERBIN", "url": "https://www.uniprot.org/uniprotkb/F1SKS3", "locus": { "chromosome": "16", "start_pos": 44533349, "end_pos": 44415189, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016954", "url": "https://www.ensembl.org/id/ENSSSCG00000016954" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016954", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016954", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06749", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06749", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511418", "url": "https://www.ncbi.nlm.nih.gov/gene/100511418", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001478", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001478", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036034", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036034", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050614", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050614", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055414", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055414", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PIANHED", "url": "https://omabrowser.org/oma/group/PIANHED/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR23119", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23119", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23119:SF46", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23119:SF46", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00595", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00595", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23598", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23598", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020932450", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020932450", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZYU9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZYU9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZYU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2J8", "url": "https://www.uniprot.org/uniprotkb/A0A287A2J8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A2J8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A2J8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVI3", "url": "https://www.uniprot.org/uniprotkb/A0A287AVI3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVI3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVI3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B119", "url": "https://www.uniprot.org/uniprotkb/A0A287B119", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B119-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B119-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BME0", "url": "https://www.uniprot.org/uniprotkb/A0A287BME0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BME0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BME0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKS3-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKS4", "url": "https://www.uniprot.org/uniprotkb/F1SKS4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SKS4-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFNSNFTAVSNFHYGSTRELHGSQGSLALSIADGRGSGGHIFRHPQTSCPGDPCQDDIFISGQQNYSSATLSHKDVLPDSLMKMPLSNGQMGQPLRPQANYSQIHHPIPQASVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELARQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1461, "header": "tr|F1SKS3-1|F1SKS3_PIG Isoform 1 of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=3 CANONICAL=F1SKS3-1" }, "isoforms": [ { "isoform_ac": "A0A286ZYU9-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#A0A286ZYU9-1", "sequence": { "sequence": "MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKMPLSNGQMGQPLRPQANYSQIHHPIPQASVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELARQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1373, "header": "tr|A0A286ZYU9-1|A0A286ZYU9_PIG Computationally mapped isoform of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=2 CANONICAL=F1SKS3-1" }, "locus": { "chromosome": "16", "start_pos": 44531335, "end_pos": 44448776, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057010.2", "url": "https://www.ensembl.org/id/ENSSSCT00000057010.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036646.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036646.2" } ] } }, { "isoform_ac": "A0A287A2J8-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#A0A287A2J8-1", "sequence": { "sequence": "MMAIVIHVRSQYIMQKKKKNLSKDGSHMRNVGSIKKHQGDKFNLVCLKMTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1351, "header": "tr|A0A287A2J8-1|A0A287A2J8_PIG Computationally mapped isoform of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=3 CANONICAL=F1SKS3-1" }, "locus": { "chromosome": "16", "start_pos": 44531335, "end_pos": 44432408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054440.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054440.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037975.3", "url": "https://www.ensembl.org/id/ENSSSCP00000037975.3" } ] } }, { "isoform_ac": "A0A287AVI3-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#A0A287AVI3-1", "sequence": { "sequence": "MWGSCRKCLKMTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFNSNFTAVSNFHYGSTRELHGSQGSLALSIADGRGSGGHIFRHPQTSCPGDPCQDDIFISGQQNYSSATLSHKDVLPDSLMKMPLSNGQMGQPLRPQANYSQIHHPIPQASVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELARQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1471, "header": "tr|A0A287AVI3-1|A0A287AVI3_PIG Computationally mapped isoform of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=2 CANONICAL=F1SKS3-1" }, "locus": { "chromosome": "16", "start_pos": 44531335, "end_pos": 44448072, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050289.2", "url": "https://www.ensembl.org/id/ENSSSCT00000050289.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048128.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048128.2" } ] } }, { "isoform_ac": "A0A287B119-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#A0A287B119-1", "sequence": { "sequence": "MQKKKKNLSKDGSHMRNVGSIKKHQGDKFNLVCLKMTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKHPQTSCPGDPCQDDIFISGQQNYSSATLSHKDVLPDSLMKMPLSNGQMGQPLRPQANYSQIHHPIPQASVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELARQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1448, "header": "tr|A0A287B119-1|A0A287B119_PIG Computationally mapped isoform of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=2 CANONICAL=F1SKS3-1" }, "locus": { "chromosome": "16", "start_pos": 44531335, "end_pos": 44432781, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056306.3", "url": "https://www.ensembl.org/id/ENSSSCT00000056306.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049921.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049921.2" } ] } }, { "isoform_ac": "A0A287BME0-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#A0A287BME0-1", "sequence": { "sequence": "MPDPQPTEQGQELNLHLHGLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFNSNFTAVSNFHYGSTRELHGSQGSLALSIADGRGSGGHIFRIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1364, "header": "tr|A0A287BME0-1|A0A287BME0_PIG Computationally mapped isoform of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=2 CANONICAL=F1SKS3-1" }, "locus": { "chromosome": "16", "start_pos": 44531335, "end_pos": 44448378, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060941.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060941.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057664.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057664.2" } ] } }, { "isoform_ac": "F1SKS3-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#F1SKS3-1", "sequence": { "sequence": "MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFNSNFTAVSNFHYGSTRELHGSQGSLALSIADGRGSGGHIFRHPQTSCPGDPCQDDIFISGQQNYSSATLSHKDVLPDSLMKMPLSNGQMGQPLRPQANYSQIHHPIPQASVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELARQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1461, "header": "tr|F1SKS3-1|F1SKS3_PIG Isoform 1 of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=3 CANONICAL=F1SKS3-1" }, "locus": { "chromosome": "16", "start_pos": 44531335, "end_pos": 44448776, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018462.3", "url": "https://www.ensembl.org/id/ENSSSCT00000018462.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017962.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017962.3" } ] } }, { "isoform_ac": "F1SKS4-1", "url": "https://www.uniprot.org/uniprotkb/F1SKS3/entry#F1SKS4-1", "sequence": { "sequence": "MQKKKKNLSKDGSHMRNVGSIKKHQGDKFNLVCLKMTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEVVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLIYLPDSIGGLISIEELDCSFNELEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNEVGVKTSESATPVKSKADEREKYMIGNSIQKTSEPEAEVSPGSLPVTANMKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKFKVPDKKDFNLPEYDLNIEERLVLIEKGIDSTATCDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDIVLGAGFLSRNAEGEAEHLENGNEYPNLECINKVNGHSEETPQSPRRTESHDTDSSIDVGLSKSTEDLSPQRSGPVGPVVKSHSITNMETGGLKIYDIHSDNGPQQPSATVKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKAIFKFDSNHNPEELNIIRGPTTSGPQSTPQIYGPPQYNIQYSSGTAVKDTLWHSKQNPQIDHVSFPPQRLPRSESTENHSHAKHSANMNFSNHNNVRASTGYHLHQRLGPGRHGEMWAVSPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGPMRRAQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSIDGQNASRPQSARPSVSEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFNSNFTAVSNFHYGSTRELHGSQGSLALSIADGRGSGGHIFRIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIVLREVSS", "length": 1386, "header": "tr|F1SKS4-1|F1SKS4_PIG Computationally mapped isoform of Erbin OS=Sus scrofa OX=9823 GN=ERBIN PE=1 SV=3 CANONICAL=F1SKS3-1" }, "locus": { "chromosome": "16", "start_pos": 44531335, "end_pos": 44432781, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018461.4", "url": "https://www.ensembl.org/id/ENSSSCT00000018461.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017961.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017961.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AE43-1", "protein_name": "Erbin", "gene_name": "Erbin", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPALWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEESGRDLKQHEDQQVVNKDKGVKPSESITTKSKLDEREKYMNSVPKTSEPEAETNAGNSPVTTNRKSSGNMKHLVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDAKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTALCSPAKQIPIDSNSKIRQEDENFNSLLQNGVNLNNSPEEKFKINDKKDFKLPEYDLNIEEQLVLIEKDVDSKATSEDSHQLDHINMNLNKLVTNNIFQPEIMERSKMQDIVLGTGFLSIHSKSEAEHIENGNKFLNSESINKVNGLSEDTAQSPGRIEPQNTSPADVGISKSTEDLSPQRSGPAGSVVKSHSITNMETGGLKIYDILSDDGPQPPGATVKVASTMDGKNIVRSKSATLLYDQPLQVFTASSSSSELLSGTKAVFKFDSNHNPEDPDIIRASIVPGPQSIPQLYGPPQYNVQYSGSAAMKDTLWHPKQNPQIDPVSFPPQRLPRSESAENHSYTKHSANMNFSNHNNVRANTAYHLHQRLAPTRHGEMWAVSPNDRLVPAVSRTTVQRQSSVSSTASVNLGDPGPTRRTEGDYLSYRELHSMGRTPVTSGSQRPLSARAFSIDGPSTSRPQSARPSISEIPERTMSVSDFNYSRTSPSKRPNARVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFSSNLTAVSSSHYGSSRDLHGSQGSLALNVADGRGSGGHSFRHPQTSSPGDCCQDDRFMSGEQNHPLGALSHRDLRDSLMKMPLSNGQMGQPLRPQANYSQTHHPPQASVARHPSREQLIDYLMLKVAHQPPYTHPHCSPRQGHELAKQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFHNAVELIIVREVSS", "length": 1451 }, "evidence": [ { "id": "F1SKS3", "url": "https://omabrowser.org/oma/group/F1SKS3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M2B233-1", "protein_name": "Erbin isoform X1", "gene_name": "erbin", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSSKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQLLYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKIVLTNYMFPQQTRTEEYVPNSDSESFNPSLWEEQRKQRAQVAFECDEDKDEREMPPRVSSHRPLLSREGNLKRYPTPYPDELKNMVKTAQSVAHRLKEDESGDEAGKEPRVSERNHIGVQDVGVKVIESPCTNGKPAEMDPKAAMNSNHNYEPIDSVDNHSIERIPLKTSDNMRTMVNHDDTLEDSEELSSEEEEMKIAEMRPPLIEISINQPKVVALSKDKKDDGKDADSLLDETVANSNQNNSNCSSPSRMSDSVSLTTDSSQDNSLCTPERESKMPLIPKNGQEDENLNQLKQMTPLLQNCNGSETSLQTILKNQQSYESKSDQMADYSFSMEERLALIEKGINNGVTDQYSKWDQINMNVAKLSPDNMLAYEELERTKSPPAKETMSSNNNARLSLENLENGNQLQKTQSGENFNSRTDQVPLRYESVRTVSTGVNALSDMSLSRSTEELSPEKKCPPAPVVKSQSIANMDGGGMKLYSIEGESPPYEVACASRTSVAGAQGQSIVRSKSASLLNDQHMQIYPGSSASSSDLLSSSKPPVSSTRYPAGPPPQYNIQYASSTVPKDNLWSQRTPVPPDQPYMPPQHSLANTNFSNRNNAPPYPQPQQRGPPKTPDMWAKERMLPQVGQRGTLQRQGSGSSGNPMCMPDPRRMPGMEGDYMTYRDIHAAGRGPLQMSQALHRPLSARTYSMDGPNAPRPQSARPPPHEVPERTMSVSDFIYQQGSPSKRSNMRVKSEHSLLDGPVGGGGRVPADWRDQVMRHIEAKKMEKSTLSRSLATLNGSQSSLAFSAVDGWQFGAHGPSDDVFSPHGQQGYHIDTLRKVPLMNGQMCPPVRSPMSCTQPPMARHPSREQLIDYLMLKVSQQPPGPQRVPHETLQQEVHVKIEKNPELGFSISGGIGGRGNPFRPDDNGIFVTRVQSEGPASKLLQPGDKILQANGYSFVNIDHGHAVSLLKTFPNTVDLIIVREMAA", "length": 1392 }, "evidence": [ { "id": "F1SKS3", "url": "https://omabrowser.org/oma/group/F1SKS3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E1BKT3-1", "protein_name": "Erbin", "gene_name": "ERBIN", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRLKDEETNEDSGKDLKPHEDQQVVNNDVGVKTSESITPVRSKADEREKYMIGNSIQKTSEPEAEVSSGNLPVTANVKASENLKHIVNHDDVFEESEELSSDEEMKMAEMRPPLIETSINQPKVVALSSNKKDDTKDTDSLSDEVTHNSNQNNSNCSSPSRMSDSVSLNTDSSQDTSLCSPVKQTHIGINSKIRQEDENFNSLLQNGDILNHSTEEKIKVPDKKDFNLPEYDLNIEERLVLIEKGVDSTATSDESHKLDHINMNLNKLVTNDTFQPEIVERSKTQDTALGMGFLSNNAKGEAEHLENGNKFPNVECINKVNGHSEETPQSPRRTEPHDTDSSVDVGHSKSTEDLSPQKSGPIGPVVKSHSITNMETGGLKIYDILSDNGPQQPSATAKVTSTIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGAKAIFKFDSNHNPEEPHIRGPTTSGPQSVPQMYGPPQYNIQYSGSAAVKDTLWHSKQNPQVDPVSFPSQRFPRSESTESHSYAKHSANMNFSNHNNVRANTGYHLHQRLGPGRHGDMWAISPNDRLIPGATRTTIQRQSSVSSAASVNLGEPGSTRRTQVPEGDYLSYRELHSVGRTPPMMSGSQRPLSARTYSVDGPHASRPQSARPSVSEIPERTMSVSDFSYSRTSPSKRPNTRVGSEHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFNSNFTAVSNFHYGSSRDLHGSQGSLALSVADGRGSGGHTFRHPQTSCPGDPCQDDIFISGQQNYPSATLSHKDVLPDSLMKMPLSNGQMGQPLRPQANYSQIHHPLPQASVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELARQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIILREVSS", "length": 1460 }, "evidence": [ { "id": "F1SKS3", "url": "https://omabrowser.org/oma/group/F1SKS3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q80TH2-3", "protein_name": "Erbin", "gene_name": "Erbin", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"length": 1402 }, "evidence": [ { "id": "F1SKS3", "url": "https://omabrowser.org/oma/group/F1SKS3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96RT1-1", "protein_name": "Erbin", "gene_name": "ERBIN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"length": 1412 }, "evidence": [ { "id": "F1SKS3", "url": "https://omabrowser.org/oma/group/F1SKS3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 11, "go_terms": [ { "name": "neurotransmitter receptor transport, endosome to postsynaptic membrane", "id": "GO:0098887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098887", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "cell-cell adhesion", "id": "GO:0098609", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098609", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "receptor clustering", "id": "GO:0043113", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043113", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway", "id": "GO:0070433", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070433", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "establishment or maintenance of epithelial cell apical/basal polarity", "id": "GO:0045197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045197", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "response to lipopolysaccharide", "id": "GO:0032496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032496", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "negative regulation of monocyte chemotactic protein-1 production", "id": "GO:0071638", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071638", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "cellular response to tumor necrosis factor", "id": "GO:0071356", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071356", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "response to muramyl dipeptide", "id": "GO:0032495", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032495", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "regulation of postsynaptic membrane neurotransmitter receptor levels", "id": "GO:0099072", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0099072", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "adherens junction", "id": "GO:0005912", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005912", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "basolateral plasma membrane", "id": "GO:0016323", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016323", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "hemidesmosome", "id": "GO:0030056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030056", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SKS3", "url": "https://www.uniprot.org/uniprotkb/F1SKS3" } ], "pmid": "" }, { "name": "postsynapse", "id": "GO:0098794", "url": 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Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SL49", "url": "https://www.uniprot.org/uniprotkb/F1SL49" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SL49", "url": "https://www.uniprot.org/uniprotkb/F1SL49" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 191, "end_pos": 193, "annotation": "n_glycosylation_sequon" }, { "start_pos": 36, "end_pos": 38, "annotation": "n_glycosylation_sequon" }, { 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22541161, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106695.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106695.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080079.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080079.1" } ] } }, { "isoform_ac": "F1SL75-1", "url": "https://www.uniprot.org/uniprotkb/F1SL75/entry#F1SL75-1", "sequence": { "sequence": "MAGTTLGARFYRQIKRHPGLIPMIGFIGLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVSTDYKKLKKDRPDF", "length": 87, "header": "tr|F1SL75-1|F1SL75_PIG Isoform 1 of NDUFA4 mitochondrial complex associated like 2 OS=Sus scrofa OX=9823 GN=NDUFA4L2 PE=3 SV=1 CANONICAL=F1SL75-1" }, "locus": { "chromosome": "5", "start_pos": 22542641, "end_pos": 22541161, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023219.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023219.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027855.1", "url": 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}, { "id": "cd18495", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18495", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043380", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043380", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23231", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23231", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23231:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23231:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SLC6", "url": "https://www.uniprot.org/uniprotkb/F1SLC6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLC6-1", "url": "https://www.uniprot.org/uniprotkb/F1SLC6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSLSSRVLRHPGRAGPQQEPGSGTGASARRPETGGDAAGHGFCYCPGSRKRKRSSGAFCYCHPDSETDEDEEEGDEQQRLLNTPRRKKLKSTSKYIYQTLFLNGENSDIKICALGEEWSLHKIYLCQSGYFSSMFSGSWKESSMNTIELEIPDQNIDIEALQVAFGSLYRDDVLIKPSRVIAILAAACMLQLDGLIQQCGETMKETINVKTVCGYYTSAGTYGLDSVKKKCLEWLLNNLMTHQNVELFKELSINVMKQLIGSSNLFVMQVEMDVYTALKKWMFLQLVPSWNGSLKQLLTETDVWFSKRKKDFEGIFLETEQGKPFVSVFRHLRLQYIISDLASARIIEQDSLVPSPQEINKEELEGNSMRCGRKLAKDGEYCWRWTGFNFGFDLLVTYTNRYIIFKRNTLNQPCSGSVSLQPRRSIAFRLRLASFDSSGKLICSRTTGYQILTLEKDQEQVVMNLDSRLLIFPLYICCNFLYISPEKN", "length": 489, "header": "tr|F1SLC6-1|F1SLC6_PIG Isoform 1 of Germ cell-less 1, spermatosis associated OS=Sus scrofa OX=9823 GN=GMCL1 PE=4 SV=5 CANONICAL=F1SLC6-1" }, "isoforms": [ { "isoform_ac": "F1SLC6-1", "url": "https://www.uniprot.org/uniprotkb/F1SLC6/entry#F1SLC6-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCP00000008897.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLC6", "url": "https://www.uniprot.org/uniprotkb/F1SLC6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SLC6", "url": "https://www.uniprot.org/uniprotkb/F1SLC6" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F1SLC6", "url": "https://www.uniprot.org/uniprotkb/F1SLC6" } ], "pmid": "" }, { "name": "nuclear matrix", "id": "GO:0016363", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016363", "evidence": [ { "database": "UniProtKB", "id": "F1SLC6", "url": "https://www.uniprot.org/uniprotkb/F1SLC6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "F1SLC6", "url": "https://www.uniprot.org/uniprotkb/F1SLC6" } ], "pmid": "" }, { "name": "germ cell development", "id": "GO:0007281", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007281", "evidence": [ { "database": "UniProtKB", "id": "F1SLC6", "url": "https://www.uniprot.org/uniprotkb/F1SLC6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 292, "end_pos": 294, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SLC6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 489, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SLC6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SLC6" } ], 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"evidence": [ { "id": "XP_020941298", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020941298" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SLC8", "url": "https://www.uniprot.org/uniprotkb/F1SLC8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C2orf42", "url": "https://www.uniprot.org/uniprotkb/F1SLC8", "locus": { "chromosome": "3", "start_pos": 72320368, "end_pos": 72289635, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008332", "url": "https://www.ensembl.org/id/ENSSSCG00000008332" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008332", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008332", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511319", "url": 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"MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPSAEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGVVENQCQHIKLAVNCQTEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRITKNILVVKCKASQKHSLGYLHTSFMQKISAKSLPERRFFCSCQTLKSHKSNASKDEAVQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTASKPKKRKKEEVSGAQTNSSMLPQDAVNSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP", "length": 574, "header": "tr|F1SLC8-1|F1SLC8_PIG Isoform 1 of Chromosome 3 C2orf42 homolog OS=Sus scrofa OX=9823 GN=C2orf42 PE=4 SV=1 CANONICAL=F1SLC8-1" }, "isoforms": [ { "isoform_ac": "F1SLC8-1", "url": "https://www.uniprot.org/uniprotkb/F1SLC8/entry#F1SLC8-1", "sequence": { "sequence": "MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPSAEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGVVENQCQHIKLAVNCQTEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRITKNILVVKCKASQKHSLGYLHTSFMQKISAKSLPERRFFCSCQTLKSHKSNASKDEAVQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTASKPKKRKKEEVSGAQTNSSMLPQDAVNSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP", "length": 574, "header": "tr|F1SLC8-1|F1SLC8_PIG Isoform 1 of Chromosome 3 C2orf42 homolog OS=Sus scrofa OX=9823 GN=C2orf42 PE=4 SV=1 CANONICAL=F1SLC8-1" }, "locus": { "chromosome": "3", "start_pos": 72319267, "end_pos": 72296873, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009124.4", "url": "https://www.ensembl.org/id/ENSSSCT00000009124.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008895.2", "url": "https://www.ensembl.org/id/ENSSSCP00000008895.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLC8", "url": "https://www.uniprot.org/uniprotkb/F1SLC8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M7F6-1", "protein_name": "Uncharacterized protein C2orf42 homolog isoform X1", "gene_name": "C8H2orf42", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEPNSQRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPSIEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGIVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRVTKSIMVVKCKASQKHSLGYLHTSFMQKIGSRSLPERRFFCSCQSLKSHKSNIPKAEAAPKCIHFFACLCAFASDETLAQEFSDFLNFDASGLKEVMVPQLGCHSESSVSACESAASKPRKRKKDEMSGAQVNSSLMPQDTVNSIVRKSALKKPVVASSLKRQVCGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVADYQDPRPPLDQPLELAPLTTITFP", "length": 574 }, "evidence": [ { "id": "F1SLC8", "url": "https://omabrowser.org/oma/group/F1SLC8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3SYX3-1", "protein_name": "Uncharacterized protein C2orf42 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPSVEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRITKNILVVKCKASQKHSLGYLHTSFVQKIGAKSLPERRFFCSCQTLKSHKSNASKDEAVQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEVIVPQLGCHSESPVSACESTASKPKKRKKEEVSGAQTNSSLLPPDTVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFIRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP", "length": 574 }, "evidence": [ { "id": "F1SLC8", "url": "https://omabrowser.org/oma/group/F1SLC8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8R3C1-1", "protein_name": "Uncharacterized protein C2orf42 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPNSQRTKVPAFLSDLGKATLRGIRKCPRCGTFNGTRGLSCKNKTCGTIFRYGARKQPSIEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETAIQTVDGTIITQLSSGRCYVPSCLKAATQGIVENQCQHIKLAVTCQAEATPLTLKSSVLNALQAAPETKQSLWQLATEPTGPLVQRVTKNIMVVKCKASQKHNLGYLHASFMQKISSRSLPERRFFCSCQTLRPHKSSVPKAEAAPKCIHFFACLCAFASDETLAQEFSDFLNFDASGLKEIIVPHLGCHAESSVSACESAASKPRKRKKDEVSGAQVNSSLMPQDAVNSNLRKSGLKRPVVTSSLKRHVCGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVENIAESYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVADYQDPRPPMDQPLELAPLTTITFP", "length": 574 }, "evidence": [ { "id": "F1SLC8", "url": "https://omabrowser.org/oma/group/F1SLC8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NWW7-1", "protein_name": "Uncharacterized protein C2orf42", "gene_name": "C2orf42", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPSVEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDETAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP", "length": 574 }, "evidence": [ { "id": "F1SLC8", "url": "https://omabrowser.org/oma/group/F1SLC8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VAL2-1", "protein_name": "Treble-clef zinc-finger domain-containing protein", "gene_name": "Dmel\\CG2321", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MRGVRKCVHCGAINGNRALLCKNSECPQRRNVLDAVQLVSLRPGSTVYSLRTKEKEQQPRNFVVIQDVTLSLQPDAAVVSSKAECFVESCKRTGGEPTDCVHVKACRELGAEFAKAQVYRVSREVLWNLNISLEQKQNLWQLYKYAEEEEHLPGVQRLNHSTFAVKCERSESFPAARLHVTVSANGLSKKKSSYACACRKLKIIVEPDNSLVMQDEICDHLLLVLAGILSSPQGKRVYGHFTSGLQTFWMPLQLETPLGDVATEDLRLSLDMVDELDPQVDILVFGDQLDLSLPNLSDGVFNLDTMQAATSSQSASSTNDALIHYANDSQLLSNLDVYAEPIELTDCNIELMDQFQPTDQLDICSEDIELPLISEPYNILAAPPIFTEATPSVVADQLPIELATISMVKKAPVKFSEIVTEVKSLKQPSLPAKRELIVNGAASAASACLDASVQPALSYSAWLDHVIELLNDSCEPLETESNTLTKRLVQQNFHVHKETFSHFCKSFSTGVKRRPLDKLTVIESGKHKGLSKYTWHFASPHTAKRIFSTSNVQLQLDRAFERHAEGHFVPYVRPPMEPQVPGQPKKRIVYPRLSLYMVKILFEAAPKDYVGNGVLVTWTPDVLPRSQFGLMHVEFTVETRPPR", "length": 643 }, "evidence": [ { "id": "F1SLC8", "url": "https://omabrowser.org/oma/group/F1SLC8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SLC8", "url": "https://www.uniprot.org/uniprotkb/F1SLC8" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SLC8", "url": "https://www.uniprot.org/uniprotkb/F1SLC8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 235, "end_pos": 237, "annotation": "n_glycosylation_sequon" }, { "start_pos": 316, "end_pos": 318, "annotation": "n_glycosylation_sequon" }, { "start_pos": 35, "end_pos": 37, "annotation": "n_glycosylation_sequon" }, { "start_pos": 414, "end_pos": 416, "annotation": "n_glycosylation_sequon" }, { "start_pos": 44, "end_pos": 46, "annotation": "n_glycosylation_sequon" }, { "start_pos": 507, "end_pos": 509, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SLC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLC8" }, { "id": "PF26708", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26708" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2orf42 C-terminal", "eco_id": "ECO_0000259", "start_pos": 361, "end_pos": 548, "start_aa": "Phe", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SLC8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLC8" }, { "id": "PF14952", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14952" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Putative treble-clef zinc-finger", "eco_id": "ECO_0000259", "start_pos": 16, "end_pos": 56, "start_aa": "Asp", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 235, "end_pos": 237 }, { "start_pos": 316, "end_pos": 318 }, { "start_pos": 35, "end_pos": 37 }, { "start_pos": 414, "end_pos": 416 }, { "start_pos": 44, "end_pos": 46 }, { "start_pos": 507, "end_pos": 509 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SLD2-1", "uniprot_ac": "F1SLD2", "uniprot_id": "F1SLD2_PIG", "mass": { "chemical_mass": 16889.0, "monoisotopic_mass": 16889.0 }, "refseq": { "ac": "XP_003125099", "name": "protein FAM136A", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125099" }, "gene_names": [ { "name": "FAM136A", "type": "recommended", "evidence": [ { "id": "F1SLD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLD2" } ] }, { "name": "FAM136A", "type": "synonym", "evidence": [ { "id": "XP_003125099", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125099" } ] } ], "protein_names": [ { "name": "Protein FAM136A", "type": "recommended", "evidence": [ { "id": "F1SLD2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLD2/entry#names_and_taxonomy" } ] }, { "name": "protein FAM136A", "type": "synonym", "evidence": [ { "id": "XP_003125099", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125099" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SLD2", "url": "https://www.uniprot.org/uniprotkb/F1SLD2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FAM136A", "url": "https://www.uniprot.org/uniprotkb/F1SLD2", "locus": {} } ], "crossref": [ { "id": "F1SLD2", "url": "https://alphafold.ebi.ac.uk/entry/F1SLD2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026446", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026446", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525693", "url": "https://www.ncbi.nlm.nih.gov/gene/100525693", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008560", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008560", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525693", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525693", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NRCGMTC", "url": "https://omabrowser.org/oma/group/NRCGMTC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SLD2", "url": "https://www.orthodb.org/?gene=F1SLD2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21096", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21096", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21096:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21096:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05811", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05811", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003125099", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125099", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SLD2", "url": "https://www.uniprot.org/uniprotkb/F1SLD2", "database": "UniProtKB", "categories": 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"evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025763.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025763.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019593.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019593.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr 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"A0A8W4FRG5-1", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6/entry#A0A8W4FRG5-1", "sequence": { "sequence": "MAERLLLEVRAQEGNMPLEDLLAFYGYESTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTTCDGDKESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYAGNEKVYENEDQLLWRPGVVLESKVKEYLVETSLRTGNEKIVDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQEGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTKFGKKRYNHHPGVTDYMDRLVDETEALGGTVNSSALTSNRPEPIPDQQLNILNSFTAGDLSALTNSVATVCSSTDVNCLDDSFPPLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKRLKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHALHQHAALHSE", "length": 502, "header": "tr|A0A8W4FRG5-1|A0A8W4FRG5_PIG Computationally mapped isoform of MIER family member 3 OS=Sus scrofa OX=9823 GN=MIER3 PE=4 SV=1 CANONICAL=F1SLJ6-1" }, "locus": { "chromosome": "16", "start_pos": 36025334, "end_pos": 35994032, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102079.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102079.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081221.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081221.1" } ] } }, { "isoform_ac": "F1SLJ6-1", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6/entry#F1SLJ6-1", "sequence": { "sequence": "MAEASFGSSSPVCFLPVGSLSSEDHDFDPTAEILVHDYDDERTLEEEEMMDEGKNFSSEIEDLEKEGNMPLEDLLAFYGYESTIPAVANSSANSSPSELADELPDMTLDKEEIAKDLLSGDDEETQSSADDLTPSVTSHETSDFFPRPLRSNTTCDGDKESEVEDVETDSGNSPEDLRKEIMIGLQYQAEIPPYLGEYAGNEKVYENEDQLLWRPGVVLESKVKEYLVETSLRTGNEKIVDRISAGTHTRDNEQALYELLKCNHNIKEAIERYCCNGKASQEGMTAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTKFGKKRYNHHPGVTDYMDRLVDETEALGGTVNSSALTSNRPEPIPDQQLNILNSFTAGDLSALTNSVATVCSSTDVNCLDDSFPPLGNTPRGQVNHVPVVTEELLTLPSNGESDCFNLFETGFYHSELNPMNMCSEESERPAKRLKMGIAVPESFMNEVSVNNLGVDFENHTHHITSAKMAVSVADFGSLSANETNGFISAHALHQHAALHSE", "length": 555, "header": "tr|F1SLJ6-1|F1SLJ6_PIG Isoform 1 of MIER family member 3 OS=Sus scrofa OX=9823 GN=MIER3 PE=4 SV=5 CANONICAL=F1SLJ6-1" }, "locus": { "chromosome": "16", "start_pos": 36025334, "end_pos": 35994032, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018427.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018427.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017930.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017930.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ6", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ6", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ6", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ6", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ6", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "transcription corepressor activity", "id": "GO:0003714", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003714", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ6", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6" } ], "pmid": "" }, { "name": "histone deacetylase binding", "id": "GO:0042826", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042826", "evidence": [ { "database": "UniProtKB", "id": "F1SLJ6", "url": "https://www.uniprot.org/uniprotkb/F1SLJ6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 152, "end_pos": 154, "annotation": "n_glycosylation_sequon" }, { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" }, { "start_pos": 512, "end_pos": 514, "annotation": "n_glycosylation_sequon" }, { "start_pos": 535, "end_pos": 537, "annotation": "n_glycosylation_sequon" }, { "start_pos": 55, "end_pos": 57, "annotation": "n_glycosylation_sequon" }, { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" }, { "start_pos": 93, "end_pos": 95, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SLJ6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 555, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": 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], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SETD9", "url": "https://www.uniprot.org/uniprotkb/F1SLK8", "locus": { "chromosome": "16", "start_pos": 35996722, "end_pos": 35980201, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016919", "url": "https://www.ensembl.org/id/ENSSSCG00000016919" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016919", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016919", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd10537", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd10537", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100521163", "url": "https://www.ncbi.nlm.nih.gov/gene/100521163", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001214", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001214", "database": "InterPro", "categories": [ "Protein 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"length": 1229, "header": "tr|A0A8W4F8Y4-1|A0A8W4F8Y4_PIG Computationally mapped isoform of Chondroitin sulfate proteoglycan family member 4B OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F1SLP8-1" }, "locus": { "chromosome": "16", "start_pos": 34100057, "end_pos": 34096299, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093626.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093626.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075285.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075285.1" } ] } }, { "isoform_ac": "F1SLP8-1", "url": "https://www.uniprot.org/uniprotkb/F1SLP8/entry#F1SLP8-1", "sequence": { "sequence": "MGRLGARRLVLLAACLGLCEALGASFYGESYVELSITEVSSELSLQLTFQTSKPQGLLFLAAGKSDYFIIELLAGNLRVRVNLGAGEQVLLSEQRLRMDDLVWHFVELFCVKDSISLVIDKHYEMTGQITGGRHSLHFQHGIYIAGHGGLDVPYLDGELPNFRGCMEDVVFNQREILTSLRSYPGFKKVYEVSLGCSDEFFAGEDEAINFFSSRSYVAFPEWKMPGHGLLEFALQTETQQALLLFQSGQEGDFIALEIAKGLLKAHVGRNKNNTELSSFSLVSDNQWHVIQFKFTERYLDLMVDEQGVRTLLPLQSQPFVSEGPLFVGGLGNHKGEEVKRLQLAFVPRKSARGLSFKGCIRGLEANSKKRALKDALLSKDIAAGCKMKSSDNENPSVTIRENLLRAEIPLSTAVPEAGQPILQDGSRYFLVLNNLEVQEGGRALLEQRHMNVDVDLEDLGIRQSQILFKIQEIPVHGFLQLDVSPEQDTEKAFSLLDLEQGKVWYVHNGSEEPMDYFTFSVFFSSKEEMPLYQQGQVSYVFNIIVIPVNDPPNLKLPEGSLLLVFENSKKQLTPSIIHVSDPDTDSLSLSFSVLGNFNSDAGFLENTNDPGRPTAGFTYGDLRDGNIFYVHRGHQHSRILLRATDGEVVSNTVVLRVMAVPWDFEIANSTGVAVEQGGTALITQGHLSVEVNGERPEVETRYLITHPPQFGQIQRQGSSGEWKQISTFSQRSVDRGRVRYCSTFKDLQLENVTDHFKFRVNIEGKSSEELTFPVTVQWLRFTLLKNVPLEISKINRHILNSDHLQAVTEGMEVAERELQFKLLTTPKKGKLLLGTHVLKANSVFSQQNITDSKISYEPQERPREHSQDTFKFLMVAKHIESKDYTFRIRFKAEKKHIILTNRGLFVKEGEGKVITKSELFAQTLDSQTFQYKVTKSPQHGKLKLIHSSDSPGVHDNITTFTDQDILGEWLMYVHDDSETEYDEFLLVASTTGPGPEGVVGDGGTERLSAEMKVTVSVGLKNDEKPVRVVDKVFDVVRNGQRLLTLADLCYHDPDSDFDDGQLLYTRRGIPNGDLVRASDPTQKLYQFRQNDLREGRVLFRHWGADSARFVLFVTDGVHYTSSLLEISVSEPYVRVVNNTGLLVQRGEESSLTTANLSVTTNQDVRTDHEIEFHILQPPKHGIVLVNSSGQGRFSLHDLKQGHVTYRHGGRSSFDVFNLTVKVKDVELELGVYVRVDSESHKHHAQILHSKTLVVEEGKPVKLSRGRLQGQAIYLFASEKLFFFFLSY", "length": 1287, "header": "tr|F1SLP8-1|F1SLP8_PIG Isoform 1 of Chondroitin sulfate proteoglycan family member 4B OS=Sus scrofa OX=9823 GN=CSPG4B PE=4 SV=4 CANONICAL=F1SLP8-1" }, "locus": { "chromosome": "16", "start_pos": 34113587, "end_pos": 34096268, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018403.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018403.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017907.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017907.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLP8", "url": "https://www.uniprot.org/uniprotkb/F1SLP8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1137, "end_pos": 1139, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1155, "end_pos": 1157, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1186, "end_pos": 1188, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1217, "end_pos": 1219, "annotation": "n_glycosylation_sequon" }, { "start_pos": 272, "end_pos": 274, "annotation": "n_glycosylation_sequon" }, { 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SLQ7-1", "uniprot_ac": "F1SLQ7", "uniprot_id": "F1SLQ7_PIG", "mass": { "chemical_mass": 28890.0, "monoisotopic_mass": 28890.0 }, "refseq": { "ac": "XP_003480647", "name": "ribosome-recycling factor, mitochondrial", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480647" }, "gene_names": [ { "name": "MRRF", "type": "recommended", "evidence": [ { "id": "F1SLQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7" } ] }, { "name": "MRRF", "type": "synonym", "evidence": [ { "id": "XP_003480647", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480647" } ] } ], "protein_names": [ { "name": "Ribosome-recycling factor, mitochondrial", "type": "recommended", "evidence": [ { "id": "F1SLQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7/entry#names_and_taxonomy" } ] }, { "name": "Ribosome-releasing factor, mitochondrial", "type": "synonym", "evidence": [ { "id": "F1SLQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7/entry#names_and_taxonomy" } ] }, { "name": "ribosome-recycling factor, mitochondrial", "type": "synonym", "evidence": [ { "id": "XP_003480647", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480647" } ] } ], "function": [ { "annotation": "Responsible for the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with GFM2. Promotes mitochondrial ribosome recycling by dissolution of intersubunit contacts.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1UK53", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UK53#function" }, { "database": "UniProtKB", "id": "ARBA00055779", "url": "https://www.uniprot.org/uniprotkb/ARBA00055779#function" }, { "database": "UniProtKB", "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MRRF", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7", "locus": { "chromosome": "1", "start_pos": 262418243, "end_pos": 262353032, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005532", "url": "https://www.ensembl.org/id/ENSSSCG00000005532" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005532", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005532", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100515005", "url": "https://www.ncbi.nlm.nih.gov/gene/100515005", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002661", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002661", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023584", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023584", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036191", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036191", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100515005", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515005", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FNPMNNG", "url": "https://omabrowser.org/oma/group/FNPMNNG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SLQ7", "url": "https://www.orthodb.org/?gene=F1SLQ7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR20982", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20982", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20982:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20982:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01765", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01765", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5419276", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5419276", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003480647", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480647", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1UK53", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UK53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UK53-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UK53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UN36", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN36", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1UN36-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1UN36-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALGLRCFRLVHPAFCNSLAALTRPVSEVTLKTVSGSRNNHGQYMAYPAVPVCHFATKKAKAKGKGQSQTRMNLNTALVEDIISLEEVDEEMKSVIEALKDNFNKTVNIRTSPGSLDQITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPDVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKESLRKVRTNAMNKLKKSKDKASEDTLRLIEKQISQMADDTVAELERHLAVKTKELLG", "length": 262, "header": "tr|F1SLQ7-1|F1SLQ7_PIG Isoform 1 of Ribosome-recycling factor, mitochondrial OS=Sus scrofa OX=9823 GN=MRRF PE=1 SV=1 CANONICAL=F1SLQ7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UK53-1", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7/entry#A0A4X1UK53-1", "sequence": { "sequence": "MALGLRCFRLVHPAFCNSLAALTRPVSEVTLKTVSGSRNNHGQYMAYPAVPVCHFATKKAKGSLDQITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPDVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKESLRKVRTNAMNKLKKSKDKASEDTLRLIEKQISQMADDTVAELERHLAVKTKELLG", "length": 210, "header": "tr|A0A4X1UK53-1|A0A4X1UK53_PIG Computationally mapped isoform of Ribosome-recycling factor, mitochondrial OS=Sus scrofa OX=9823 GN=MRRF PE=1 SV=1 CANONICAL=F1SLQ7-1" }, "locus": { "chromosome": "1", "start_pos": 262415634, "end_pos": 262361552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087671.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087671.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071098.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071098.1" } ] } }, { "isoform_ac": "A0A4X1UN36-1", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7/entry#A0A4X1UN36-1", "sequence": { "sequence": "MALGLRCFRLVHPAFCNSLAALTRPVSEVTLKTVSGSRNNHGQYMAYPAVPVCHFATKKAKAKGKGQSQTRMNLNTALVEDIISLEEVDEEMKSVIEALKDNFNKTVNIRTSPGSLDQITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPDVEGTLIRVPIPKSAKWPTTQLQSWRGIWQ", "length": 201, "header": "tr|A0A4X1UN36-1|A0A4X1UN36_PIG Computationally mapped isoform of Ribosome-recycling factor, mitochondrial OS=Sus scrofa OX=9823 GN=MRRF PE=1 SV=1 CANONICAL=F1SLQ7-1" }, "locus": { "chromosome": "1", "start_pos": 262415611, "end_pos": 262361552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064246.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064246.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036257.2", "url": "https://www.ensembl.org/id/ENSSSCP00000036257.2" } ] } }, { "isoform_ac": "F1SLQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7/entry#F1SLQ7-1", "sequence": { "sequence": "MALGLRCFRLVHPAFCNSLAALTRPVSEVTLKTVSGSRNNHGQYMAYPAVPVCHFATKKAKAKGKGQSQTRMNLNTALVEDIISLEEVDEEMKSVIEALKDNFNKTVNIRTSPGSLDQITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPDVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKESLRKVRTNAMNKLKKSKDKASEDTLRLIEKQISQMADDTVAELERHLAVKTKELLG", "length": 262, "header": "tr|F1SLQ7-1|F1SLQ7_PIG Isoform 1 of Ribosome-recycling factor, mitochondrial OS=Sus scrofa OX=9823 GN=MRRF PE=1 SV=1 CANONICAL=F1SLQ7-1" }, "locus": { "chromosome": "1", "start_pos": 262415634, "end_pos": 262361552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006083.4", "url": "https://www.ensembl.org/id/ENSSSCT00000006083.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005928.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005928.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515005", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515005", "resource": "KEGG Pathway" }, { "id": "R-SSC-5419276", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5419276", "resource": "Reactome", "description": "Mitochondrial translation termination" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BQ58-1", "protein_name": "Ribosome-recycling factor, mitochondrial", "gene_name": "MRRF", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAMALRCFRHLHSLLHCSSLAVVRQLPQPPARCTPLLLDGCRHCAHPLLLARPLATKKAKGKGQTQAKVNISAALVEDIINLEETNTDMQAVVEALKEDFNRNLNVRTSQGALDHIIVTTKDGKFPLNQLGQISQKSPQLIVVNMTSFPESTAAAMKAIRESGMNLNPEVDGTLIRVPVPKVTREHRESLAKLAKQSTNKSKEALRKVRSKSVNQVKKFKSKVSEDTIWLLEKQIQQMADSAAAEMDKLLAAKTKELLG", "length": 259 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3X7D8-1", "protein_name": "Ribosome-recycling factor, mitochondrial", "gene_name": "MRRF", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTHYARAAAPPRDVTTPAPPAPPPPPPWSRESFPNNPGASCGYSQGLSSVMALGLRCFRLVHPAFCNSLAALTRPVSEVTLQTVRGRQNDHGQCMAYAAVPVRHFATKKAKAKGKGQSQTRMNLNTALVEDIINLEEVDEEMKSVIEALKDNFNKTVNIRTSPGALDNITVVTADGKLPLNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKDSLRKVRTNAINKVKKSKDKASEDTIRLIEKQISQMADDTVAELDRHLAVKTKELLG", "length": 312 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55G90-1", "protein_name": "Ribosome recycling factor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIRGINRFSGCFVRSIGNNSNQQQQTYRGIISVAKTTTTSSFQRRSPFSIFNENSVMTLRAKKSGGGGGGKSNSKDDEVFTPWKQVDISSVSSQGDKTIEYVSRELGNIRFGRVGPELLERINVETPSGNLLLPHMAMITIKDSLTLNITLYDSSLLSNVERALTNSGLGLNPQTFDTTIRVSLPKPTQDLRQKLIKQVNTISEDAKVSIRRHRKDGMDILKRYKLTKDDEKTLEKNIQKITDDYIKSITKITETKLKEINSN", "length": 263 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5RKI9-1", "protein_name": "Ribosome-recycling factor, mitochondrial", "gene_name": "Mrrf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALGIRCFRLLHPAFSSYLADLSRPVSEVPMKTVRGRQRDHIQYSAHPAVPVRQFATKKAKAKGKGQPQARVNINTALVEDIISLEEVDEDMKSVMEALKDNFNKTLNIRTAPGSLDHITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKTSEDTIRLIEKQISQMADDTVAELDRHLAAKTKELLG", "length": 262 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q96E11-1", "protein_name": "Ribosome-recycling factor, mitochondrial", "gene_name": "MRRF", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALGLKCFRMVHPTFRNYLAASIRPVSEVTLKTVHERQHGHRQYMAYSAVPVRHFATKKAKAKGKGQSQTRVNINAALVEDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDTVSEDTIRLIEKQISQMADDTVAELDRHLAVKTKELLG", "length": 262 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D6S7-1", "protein_name": "Ribosome-recycling factor, mitochondrial", "gene_name": "Mrrf", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASGIRCFRLLHPAFRSYHAALTRPVSEVSMKTVSGRQHGHRQYSAYPAVPVRHFATKKAKAKGKGQPQARVTVNRALVEDIISLEEVDEDMKSVVEALKDNFNKTLNIRTAPGSLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKENLRKVRTNAMNKLKKSKDKTSEDTIRLIEKQISQMADDTVAELDQHLAAKTKELLG", "length": 262 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9M1X0-1", "protein_name": "Ribosome-recycling factor, chloroplastic", "gene_name": "RRF", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAASFSSTAPTTPVLRFRANYSKPLLSLPDSCLRIISSAISPSTRLIACSFKTDKLPLGAGVNLSGGPVVKRSLQKRLVIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMKV", "length": 275 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VSW4-1", "protein_name": "Ribosome-recycling factor, mitochondrial", "gene_name": "mRRF1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLRSALHLAALGVRQTRVSSSSPKLPLILQNNLENTKYLQVARDYAKGKDKKKEKGGKGKPGKVEINEQQLREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQELAQISRKNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAKALFVKYRDAIRGVQNEHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASKQKELLGD", "length": 254 }, "evidence": [ { "id": "F1SLQ7", "url": "https://omabrowser.org/oma/group/F1SLQ7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "ribosome disassembly", "id": "GO:0032790", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032790", "evidence": [ { "database": "UniProtKB", "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7" } ], "pmid": "" }, { "name": "translation", "id": "GO:0006412", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006412", "evidence": [ { "database": "UniProtKB", "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ribosomal large subunit binding", "id": "GO:0043023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043023", "evidence": [ { "database": "UniProtKB", "id": "F1SLQ7", "url": "https://www.uniprot.org/uniprotkb/F1SLQ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { 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"evidence": [ { "id": "F1SLU7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SLU7/entry#names_and_taxonomy" } ] }, { "name": "cell division cycle-associated protein 3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_001928382", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928382" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SLU7", "url": "https://www.uniprot.org/uniprotkb/F1SLU7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CDCA3", "url": "https://www.uniprot.org/uniprotkb/F1SLU7", "locus": { "chromosome": "5", "start_pos": 63864269, "end_pos": 63859541, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000683", "url": 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"F1SLU7", "url": "https://www.uniprot.org/uniprotkb/F1SLU7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLU7-1", "url": "https://www.uniprot.org/uniprotkb/F1SLU7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSAKSVPVTPARPPPHNKLLARVADPRSPSAGIQRTPIQVESSPQPNLPSGEQLEGPKQAQDTDPRSPTLGIARTPMKTSSGELQSPLVKQLSDVFETEDPKSNLPPEPILPLETLSSSELDLPLGTRFSLEDQMPPWSHSELPSKQMLSKEETGQPSETPVASQGSDKPLRDPETPRSSGSKCSRRKPNGKVLGRSPLTILQDDNSPGTRTARQGKRPSPLSENVRELKEGAILGTERLLKTGGRVWEHGQGHDKENRHFPLVEN", "length": 267, "header": "tr|F1SLU7-1|F1SLU7_PIG Isoform 1 of Cell division cycle associated 3 OS=Sus scrofa OX=9823 GN=CDCA3 PE=4 SV=1 CANONICAL=F1SLU7-1" }, "isoforms": [ { "isoform_ac": "A0A4X1UUN6-1", "url": "https://www.uniprot.org/uniprotkb/F1SLU7/entry#A0A4X1UUN6-1", "sequence": { "sequence": 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"MGSAKSVPVTPARPPPHNKLLARVADPRSPSAGIQRTPIQVESSPQPNLPSGEQLEGPKQAQDTDPRSPTLGIARTPMKTSSGELQSPLVKQLSDVFETEDPKSNLPPEPILPLETLSSSELDLPLGTRFSLEDQMPPWSHSELPSKQMLSKEETGQPSETPVASQGSDKPLRDPETPRSSGQ", "length": 183, "header": "tr|A0A4X1UZL8-1|A0A4X1UZL8_PIG Computationally mapped isoform of Cell division cycle associated 3 OS=Sus scrofa OX=9823 GN=CDCA3 PE=4 SV=1 CANONICAL=F1SLU7-1" }, "locus": { "chromosome": "5", "start_pos": 63861551, "end_pos": 63859877, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065022.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065022.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042593.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042593.2" } ] } }, { "isoform_ac": "F1SLU7-1", "url": "https://www.uniprot.org/uniprotkb/F1SLU7/entry#F1SLU7-1", "sequence": { "sequence": 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"site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 10, "start_aa": "Thr", "end_pos": 10, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr10", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLU7", "url": "https://www.uniprot.org/uniprotkb/F1SLU7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153312", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153312", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C8X5-1", "protein_name": "Cell division cycle associated 3", "gene_name": "CDCA3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGASGSAPATPVPGSLRNRHLAHVSDPRSPSAGILRTPIEVVSSPAGSPQPGPAQAGVQDADPRSPTPGIYRTPMKDTPSDSVECLVRQLGEAFAVETVTPEPPPPVAARALEEPALQGAVELQPGRGLEPGCEAAARPHRCAGPGLATGGKHIRRKASNKILATSGGIVRSPFSILQDDNSPSAPVQRQAKKHILGENPGEKEVAVDLSRSLKAGNCAWSDLNKENQHCPFVEN", "length": 235 }, "evidence": [ { "id": "F1SLU7", "url": 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"MPGLRVGELSLGKLHHTGCPGNMPGATPEWHHLPSSTHRWWLLLWGVLQACPTQGSMLLAQPLPLKLTSPGYPEPYVKGQESFTDIEAPEGFAVKLIFQDFDLEPSPDCEQDSVTITASGMDPSRFCGQQGSPLGSPPGEKAFVSLGNSLRLTFRASASSEDRPPNLHKGFLALYQAVGVNHSQPISQASGGPEAINTPEGNPAKAQSHCKEPYYQPMAAETLTCTTQVPWKQTQEKEVVPGCVPVCGRPVTPIAQNREPLGASKAALGSFPWQAFTSIYGRGGGALLGDRWILTAAHTIYPKDGIFLGRRRSAEVFLGHTDIDEMLRLGGYPVRRVVVHPDYRQDEPHNFHGDIALLELQHRVPLGPSLLPVCLPDREALYRPGLLGYVSGFGVEMGWLTTELKYSRLPVAPRAACEAWLREKGRTEVFSAGMFCAGDRMRQQSVCQGDSGGAYVVWDDRARHWVATGIVSWGIGCGEGYGFYTKVLNYVDWIRRVMDGKD", "length": 502, "header": "tr|F1SLV7-1|F1SLV7_PIG Isoform 1 of Complement C1r subcomponent-like protein OS=Sus scrofa OX=9823 GN=C1RL PE=4 SV=4 CANONICAL=F1SLV7-1" }, "isoforms": [ { "isoform_ac": "F1SLV7-1", "url": "https://www.uniprot.org/uniprotkb/F1SLV7/entry#F1SLV7-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCP00000000716.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 27, "start_aa": "Thr", "end_pos": 27, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr27", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLV7", "url": "https://www.uniprot.org/uniprotkb/F1SLV7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "F1SLV7", "url": "https://www.uniprot.org/uniprotkb/F1SLV7" } ], "pmid": "" } ] }, { "name": "Cellular Component", 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"evidence": [ { "database": "UniProtKB", "id": "F1SLW9", "url": "https://www.uniprot.org/uniprotkb/F1SLW9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLRG1", "url": "https://www.uniprot.org/uniprotkb/F1SLW9", "locus": { "chromosome": "5", "start_pos": 62507507, "end_pos": 62523810, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000663", "url": "https://www.ensembl.org/id/ENSSSCG00000000663" } ] } } ], "crossref": [ { "id": "F1SLW9", "url": "https://alphafold.ebi.ac.uk/entry/F1SLW9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000663", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000663", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03593", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03593", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001304", "url": 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"PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00059", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00059", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SLW9", "url": "https://www.uniprot.org/uniprotkb/F1SLW9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SLW9-1", "url": "https://www.uniprot.org/uniprotkb/F1SLW9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTDNVVYSVLEFSMAPQAQNDHRLQPKASSRSSLSCYVAVALGLLGVILASLLLFQWILCQGSTVSTCASCPSCPDLWMGHGDYCYYFSVEKKDWNSLEFCLAKDAHLFMFRDNQEMVLIQNFLQNDFYWIGLRNTSDWRWEDGSALNTSKISSNSYVQKCGTISKDGLLASSCEPLPWVCKKVRL", "length": 186, "header": "tr|F1SLW9-1|F1SLW9_PIG Isoform 1 of Killer cell lectin like receptor G1 OS=Sus scrofa OX=9823 GN=KLRG1 PE=4 SV=4 CANONICAL=F1SLW9-1" }, "isoforms": [ { "isoform_ac": "F1SLW9-1", "url": "https://www.uniprot.org/uniprotkb/F1SLW9/entry#F1SLW9-1", "sequence": { "sequence": "MTDNVVYSVLEFSMAPQAQNDHRLQPKASSRSSLSCYVAVALGLLGVILASLLLFQWILCQGSTVSTCASCPSCPDLWMGHGDYCYYFSVEKKDWNSLEFCLAKDAHLFMFRDNQEMVLIQNFLQNDFYWIGLRNTSDWRWEDGSALNTSKISSNSYVQKCGTISKDGLLASSCEPLPWVCKKVRL", "length": 186, "header": "tr|F1SLW9-1|F1SLW9_PIG Isoform 1 of Killer cell lectin like receptor G1 OS=Sus scrofa OX=9823 GN=KLRG1 PE=4 SV=4 CANONICAL=F1SLW9-1" }, "locus": { "chromosome": "5", "start_pos": 62523701, "end_pos": 62507510, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000719.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000719.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000704.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000704.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe 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"uniprot_id": "F1SM09_PIG", "mass": { "chemical_mass": 93625.0, "monoisotopic_mass": 93625.0 }, "refseq": {}, "gene_names": [ { "name": "IQCA1", "type": "recommended", "evidence": [ { "id": "F1SM09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM09" } ] } ], "protein_names": [ { "name": "IQ motif containing with AAA domain 1", "type": "synonym", "evidence": [ { "id": "F1SM09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM09/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SM09", "url": "https://www.uniprot.org/uniprotkb/F1SM09" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IQCA1", "url": "https://www.uniprot.org/uniprotkb/F1SM09", "locus": { "chromosome": "15", 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVD9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM09", "url": "https://www.uniprot.org/uniprotkb/F1SM09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM09-1", "url": "https://www.uniprot.org/uniprotkb/F1SM09-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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containing with AAA domain 1 OS=Sus scrofa OX=9823 GN=IQCA1 PE=4 SV=3 CANONICAL=F1SM09-1" }, "locus": { "chromosome": "15", "start_pos": 136321406, "end_pos": 136153986, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051935.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051935.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035427.3", "url": "https://www.ensembl.org/id/ENSSSCP00000035427.3" } ] } }, { "isoform_ac": "F1SM09-1", "url": "https://www.uniprot.org/uniprotkb/F1SM09/entry#F1SM09-1", "sequence": { "sequence": "MSNAMYNKMWHQTQEDLGSLLVKEAEKRTEPLGTQAFILQLLATFYVNYVQIFRDLEDVYDQMVHPQKRILIRKILDGVMGRILELKHEMVELELTEFQYFDDILQDLKLAPQQLDIPIPKYFLKEKLEVVKGREKILSQILADTGFSLSDKKYPIKPMPLEEAVKVIQVSERARQGRLRAMFMKQIYLQDCRAKQARLSGEKFADMGAAALRIQKVWRGFRQCKRTEREREEEMIFLGMNPPPSFHEVSDAVLQADRVAHLRNEVQMRHEEEYRDALVTIQDNLRLMEGPDIKENLQDQIRHWFIECRNLTGSFPDYPKEEEGGSAVIFSNKTPQQVIEDILESQEEEEKSKKKKKKKESKPEKEKEKKETKEKNKEEEEEWKMSPSVFLPTMEEGNNTYRDLWKNRDESWNFPQGYDPEMIKEVKRKEVESEIRMQVDELMRQELKNLKLAVNREKESAAKPGKKNKTTESLYKELVEEGLLIQSLKVNLSDYIGEYSYLGTTLRQVSIEPMPSLLDVRQLVTLYGILPLGSAAVHEKAPLVKSLLLAGPSGVGKKMLVHAICTETGANLFDLSAANIAGKYPGKSGLQMMLHLVFKVARQLQPSVVWIGDTEKIFYKKVPQAEKAMEPKRLKKQLPKILKLLKPEDRILIVGTTHRPFDAELQSFCRVYQKIILVPRPDYASRYVLWKQILQRNGGVITEALNVSCLAKISDGFTQGDIVHVVKQVLTERRVRQQQYKPLMAVEFVAALTSMSPVYQEEEDSFKNWYAKTPMGKKRALVLTGGNPENEKDKGKKKENKGKKEKMKK", "length": 809, "header": "tr|F1SM09-1|F1SM09_PIG Isoform 1 of IQ motif containing with AAA domain 1 OS=Sus scrofa OX=9823 GN=IQCA1 PE=4 SV=5 CANONICAL=F1SM09-1" }, "locus": { "chromosome": "15", "start_pos": 136321406, "end_pos": 136153986, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017774.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017774.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017293.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017293.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM09", "url": "https://www.uniprot.org/uniprotkb/F1SM09" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F1SM09", "url": "https://www.uniprot.org/uniprotkb/F1SM09" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F1SM09", "url": "https://www.uniprot.org/uniprotkb/F1SM09" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 310, "end_pos": 312, "annotation": "n_glycosylation_sequon" }, { "start_pos": 332, "end_pos": 334, "annotation": "n_glycosylation_sequon" }, { "start_pos": 398, "end_pos": 400, "annotation": "n_glycosylation_sequon" }, { "start_pos": 468, "end_pos": 470, "annotation": "n_glycosylation_sequon" }, { "start_pos": 491, "end_pos": 493, "annotation": "n_glycosylation_sequon" }, { "start_pos": 706, "end_pos": 708, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SM09-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 809, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SM09-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SM09" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SM09", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM09" }, { "id": "SM00382", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00382" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AAA+ ATPase", "eco_id": "ECO_0000259", "start_pos": 543, "end_pos": 682, "start_aa": "Leu", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 310, "end_pos": 312 }, { "start_pos": 332, "end_pos": 334 }, { "start_pos": 398, "end_pos": 400 }, { "start_pos": 468, "end_pos": 470 }, { "start_pos": 491, "end_pos": 493 }, { "start_pos": 706, "end_pos": 708 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"authors" ] } ] }, { "uniprot_canonical_ac": "F1SM12-1", "uniprot_ac": "F1SM12", "uniprot_id": "F1SM12_PIG", "mass": { "chemical_mass": 50050.0, "monoisotopic_mass": 50050.0 }, "refseq": { "ac": "XP_020930929", "name": "ankyrin repeat and SOCS box protein 18 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930929" }, "gene_names": [ { "name": "ASB18", "type": "recommended", "evidence": [ { "id": "F1SM12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM12" } ] }, { "name": "ASB18", "type": "synonym", "evidence": [ { "id": "XP_020930929", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930929" } ] } ], "protein_names": [ { "name": "Ankyrin repeat and SOCS box containing 18", "type": "synonym", "evidence": [ { "id": "F1SM12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM12/entry#names_and_taxonomy" } ] }, { "name": "ankyrin repeat and SOCS box protein 18 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020930929", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930929" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SM12", "url": "https://www.uniprot.org/uniprotkb/F1SM12" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ASB18", "url": "https://www.uniprot.org/uniprotkb/F1SM12", "locus": { "chromosome": "15", "start_pos": 136049740, "end_pos": 136116017, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016318", "url": "https://www.ensembl.org/id/ENSSSCG00000016318" } ] } } ], "crossref": [ { "id": "F1SM12", "url": "https://alphafold.ebi.ac.uk/entry/F1SM12", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016318", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016318", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03723", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03723", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621336", "url": "https://www.ncbi.nlm.nih.gov/gene/100621336", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036036", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036036", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051573", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051573", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621336", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621336", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DARNGCG", "url": "https://omabrowser.org/oma/group/DARNGCG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SM12", "url": "https://www.orthodb.org/?gene=F1SM12", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24136", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24136", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24136:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24136:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198:SF173", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198:SF173", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07525", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07525", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020930929", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930929", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2RFV2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFV2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFV2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM12", "url": "https://www.uniprot.org/uniprotkb/F1SM12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM12-1", "url": "https://www.uniprot.org/uniprotkb/F1SM12-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSISARLPDYPVTSDLVTRLKSALEAGDEERVRALACTEVRPVDAVIELANDDWMKDPSAQLPPGVLLGDMDRLKPLMDQFFQDANVVFEIKKDEMEWQGKSSGTFGLSGLWTLEYKRELTTPLCIAAAHGHTACVRHLLGRGADPDASPGGRGALHEACLGGHTACARLLLQHRADADLLSAEGLAPLHLCRTAASLGCAQALLEHGASVRRAGGAGLDTPLHVAARHGLDEHALLYLGRGASVDARNGRGETALSVACGAARRPDEHARCLRLCALLLRGGAAADARDEDERSPLHKACGRARHDLARLLLRHGADVGALDYGGATPLACVLQTAACAREAAPHRTVQALLNHGSPTVWPDAFSKVLKTCAPAPTTVEVLFNSYPQLRVSESWKEVIPEEVFQVHQAFYQSLLALAHAPRSLQHLCRCAIRKVFGGKCFCLVPLLPLPPSLQDFLLLEPEGVLH", "length": 466, "header": "tr|F1SM12-1|F1SM12_PIG Isoform 1 of Ankyrin repeat and SOCS box containing 18 OS=Sus scrofa OX=9823 GN=ASB18 PE=4 SV=5 CANONICAL=F1SM12-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RFV2-1", "url": "https://www.uniprot.org/uniprotkb/F1SM12/entry#A0A5G2RFV2-1", "sequence": { "sequence": "MERRPEPVGGKLQIFQKMEKEPQTRAGSPVLEYHAALITGDMDRLKPLMDQFFQDANVVFEIKKDEMEWQGKSSGTFGLSGLWTLEYKRELTTPLCIAAAHGHTACVRHLLGRGADPDASPGGRGALHEACLGGHTACARLLLQHRADADLLSAEGLAPLHLCRTAASLGCAQALLEHGASVRRAGGAGLDTPLHVAARHGLDEHALLYLGRGASVDARNGRGETALSVACGAARRPDEHARCLRLCALLLRGGAAADARDEDERSPLHKACGRARHDLARLLLRHGADVGALDYGGATPLACVLQTAACAREAAPHRTVQALLNHGSPTVWPDAFSKVLKTCAPAPTTVEVLFNSYPQLRVSESWKEVIPEEVFQVHQAFYQSLLALAHAPRSLQHLCRCAIRKVFGGKCFCLVPLLPLPPSLQDFLLLEPEGVLH", "length": 437, "header": "tr|A0A5G2RFV2-1|A0A5G2RFV2_PIG Computationally mapped isoform of Ankyrin repeat and SOCS box containing 18 OS=Sus scrofa OX=9823 GN=ASB18 PE=3 SV=1 CANONICAL=F1SM12-1" }, "locus": { "chromosome": "15", "start_pos": 136096390, "end_pos": 136050807, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089924.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089924.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069974.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069974.1" } ] } }, { "isoform_ac": "F1SM12-1", "url": "https://www.uniprot.org/uniprotkb/F1SM12/entry#F1SM12-1", "sequence": { "sequence": "MSISARLPDYPVTSDLVTRLKSALEAGDEERVRALACTEVRPVDAVIELANDDWMKDPSAQLPPGVLLGDMDRLKPLMDQFFQDANVVFEIKKDEMEWQGKSSGTFGLSGLWTLEYKRELTTPLCIAAAHGHTACVRHLLGRGADPDASPGGRGALHEACLGGHTACARLLLQHRADADLLSAEGLAPLHLCRTAASLGCAQALLEHGASVRRAGGAGLDTPLHVAARHGLDEHALLYLGRGASVDARNGRGETALSVACGAARRPDEHARCLRLCALLLRGGAAADARDEDERSPLHKACGRARHDLARLLLRHGADVGALDYGGATPLACVLQTAACAREAAPHRTVQALLNHGSPTVWPDAFSKVLKTCAPAPTTVEVLFNSYPQLRVSESWKEVIPEEVFQVHQAFYQSLLALAHAPRSLQHLCRCAIRKVFGGKCFCLVPLLPLPPSLQDFLLLEPEGVLH", "length": 466, "header": "tr|F1SM12-1|F1SM12_PIG Isoform 1 of Ankyrin repeat and SOCS box containing 18 OS=Sus scrofa OX=9823 GN=ASB18 PE=4 SV=5 CANONICAL=F1SM12-1" }, "locus": { "chromosome": "15", "start_pos": 136116017, "end_pos": 136050807, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017771.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017771.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017290.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017290.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM12", "url": "https://www.uniprot.org/uniprotkb/F1SM12" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621336", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621336", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZU92-1", "protein_name": "Ankyrin repeat and SOCS box-containing 18", "gene_name": "Asb18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGWDPPPDYPLSSDLVRRLKSALATGDRDTVQELICTEVEPVDAVLELANDDWMKEPSAKLPTGALLGDLDHIQSLTDQCFWDANVVFEISTEEMEWQVTSLATFGLSGLWTLEYKRELTTPLCIAAAHGHESCVRHLLSRKADPDASPGGRGALHEACLGSHTACARLLLQHGADPDLLSSEGLAPLHLCRTPASLGCAQELLEHGATVQLEGGPNRDTPLHVAAQRGLDKHAQLYLGCGARVDARNGRGETALSAACGAAARSPEEHARCLRLCALLLRGGAATDMRDEDERSPLHKACGHARPGLCTLLLRNGADADALDYGGASPLARALQTATCAPPTAPQRTVQALLNHGSRSVWPDAFPKVLRTCAPVPAVIEVLFNSYTQLRVSESWREAIPEEVYQMHKPFYRSLFALAHTPRCLQHFCRCAIRKLFGKECIHLVPQLPLPETLQNYLLLEPEGVLR", "length": 467 }, "evidence": [ { "id": "F1SM12", "url": "https://omabrowser.org/oma/group/F1SM12/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N349-1", "protein_name": "Ankyrin repeat and SOCS box containing 18", "gene_name": "ASB18", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSVSDRLPDYPVNSDFVKKLKAALEGRDEARLKDLICADVRHVDAVIELANDDWMKDPSAQLPPGVLVGDLEHLKPLMDKFFQDANVVFEIKKDEMVWQVKSPATFGLSGLWTLEYKRELTTPLCIAAAQGHTACVRHLLGRGADPDASPGGRGALHEACLGSHTACARLLLQHRADPDLLSAEGLAPLHLCRTAASLGCAQALLEHGASVQLEGGTSRDTPLHVAAQRGLDEHARLYLNRGARVDARNGHGETALSAACGAALRPDEHARCLRLCTLLLRHGAAADTRDEDERSPLHKACGHARPGLARLLLLHGADARALDYGGASPLARVLQTAACAPEGEPQLTVQELLNHGSPTVWPDAFPKVLKSCAAVPTVIEVLFNSYSQLRVSESWKDVIPEEVFQMHQAFYRSLFALAHTPRCLQHLCRCAIRKSFGRKCFSLVPLLPLPESLQNYLLLEPEGVLH", "length": 466 }, "evidence": [ { "id": "F1SM12", "url": "https://omabrowser.org/oma/group/F1SM12/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6ZVZ8-1", "protein_name": "Ankyrin repeat and SOCS box protein 18", "gene_name": "ASB18", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSNSDYLPDYPLNSDLVKRLKSALDAKDEERVRDLICTEITPVDAVIELANDDWMKDPSAQLPTGMLLGDLDHLKPLMDQFFQDANVVFEINKDEMEWQVKSPATFGLSGLWTLEYKRELTTPLCIAAAHGHTACVRHLLGRGADPDASPGGRGALHEACLGGHTACVRLLLQHRADPDLLSAEGLAPLHLCRTAASLGCAQALLEHGASVQRVGGTGRDTPLHVAAQRGLDEHARLYLGRGAHVDARNGRGETALSAACGAARRPDEHGRCLRLCALLLRRGAEADARDEDERSPLHKACGHASHSLARLLLRHGADAGALDYGGASPLGRVLQTASCALQASPQRTVQALLNHGSPTVWPDAFPKVLKTCASVPAVIEVLFNSYPQLCLSESWKEVIPEEVFQMHKPFYQSLFALALTPRCLQHLCRCALRRLFGKRCFDLIPLLPLPKPLQNYLLLEPQGVLH", "length": 466 }, "evidence": [ { "id": "F1SM12", "url": "https://omabrowser.org/oma/group/F1SM12/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8VHA6-1", "protein_name": "Ankyrin repeat and SOCS box protein 18", "gene_name": "Asb18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSWDSPPDYPLSSDIVRRLKSALATGDEDTVQKLICTEVEPVDAVIELANDDWMKEPSAELPTGVLLGDLDHIRLLMDQCFWDANAVFEISNGEMEWQVTSLATFGLSGLWTLEYQRELTTPLCIAAAHGHESCVRHLLSRKADPNASPGGRGALHEACLGNHTACARLLLQHGADPDLLNSEGLAPLHLCRTPASLGCARELLEHGATVQLEGGPGRDTPLHVAAQRGLDEHAQLYLGFGARVDARNGRGETALSAACGAAARSPDEHARCLRLCALLLRGGAAADARDEDERSPLHKACGHARPGLCTLLLRHGADAGALDYGGASPLARALQTATCAPPTAPQRTVQVLLNHGSRSVWPDAFPKVLRTCAQVPEVIEVLFNSYTQLPVSESWREAIPEEVYQMHKPFYRSLFALAHTPRCLQHLCRCTIRKLFGKESVHLVPQLPLPETLQNYLLLEPEGVLC", "length": 467 }, "evidence": [ { "id": "F1SM12", "url": "https://omabrowser.org/oma/group/F1SM12/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F1SM12", "url": "https://www.uniprot.org/uniprotkb/F1SM12" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F1SM12", "url": "https://www.uniprot.org/uniprotkb/F1SM12" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SM12-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 466, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SM12-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SM12" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SM12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM12" }, { "id": "PS50225", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50225" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SOCS box", "eco_id": "ECO_0000259", "start_pos": 421, "end_pos": 457, "start_aa": "Pro", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SM23-1", "uniprot_ac": "F1SM23", "uniprot_id": "F1SM23_PIG", "mass": { "chemical_mass": 138766.0, "monoisotopic_mass": 138766.0 }, "refseq": { "ac": "XP_020931862", "name": "ubiquitin carboxyl-terminal hydrolase 40 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931862" }, "gene_names": [ { "name": "USP40", "type": "recommended", "evidence": [ { "id": "F1SM23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ] }, { "name": "USP40", "type": "synonym", "evidence": [ { "id": "XP_020931862", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931862" } ] } ], "protein_names": [ { "name": "Ubiquitin carboxyl-terminal hydrolase 40", "type": "recommended", "evidence": [ { "id": "F1SM23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM23/entry#names_and_taxonomy" } ] }, { "name": "3.4.19.12", "type": "synonym", "evidence": [ { "id": "F1SM23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM23/entry#names_and_taxonomy" } ] }, { "name": "Deubiquitinating enzyme 40", "type": "synonym", "evidence": [ { "id": "F1SM23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM23/entry#names_and_taxonomy" } ] }, { "name": "Ubiquitin thioesterase 40", "type": "synonym", "evidence": [ { "id": "F1SM23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM23/entry#names_and_taxonomy" } ] }, { "name": "Ubiquitin-specific-processing protease 40", "type": "synonym", "evidence": [ { "id": "F1SM23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM23/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin carboxyl-terminal hydrolase 40 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020931862", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931862" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "USP40", "url": "https://www.uniprot.org/uniprotkb/F1SM23", "locus": { "chromosome": "15", "start_pos": 133870834, "end_pos": 133952863, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016306", "url": "https://www.ensembl.org/id/ENSSSCG00000016306" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016306", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016306", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02659", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02659", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100154213", "url": "https://www.ncbi.nlm.nih.gov/gene/100154213", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001394", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001394", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018200", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018200", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028889", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028889", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057763", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057763", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154213", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154213", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SM23", "url": "https://www.orthodb.org/?gene=F1SM23", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24006", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24006", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24006:SF842", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24006:SF842", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00443", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00443", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25822", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25822", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020931862", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931862", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM23-1", "url": "https://www.uniprot.org/uniprotkb/F1SM23-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM25", "url": "https://www.uniprot.org/uniprotkb/F1SM25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM25-1", "url": "https://www.uniprot.org/uniprotkb/F1SM25-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFGDLFEEDYSSVSNNHYGKGKKLKTKTLEPSAPREFTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIVNQVVCKDCKNVSEKQEDFLDLTVAVKNVSSLEDALWNMYVEEEVFDYDNLYHCGTCDKLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYMYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEDKSNPDVNLEDLQSEKEIDDPLMILKAILLQEESNQIPVDQLGQKLLKKKGVSWNKKYRKQYGPLRKFLQLHSQMFQLSSDERTVSLLKDRSLQAESDFQRSDQKTSTSESPGLNDRPSCPHWFDINDAKVQPIKEKDIEQQFQGKESAYMLFYRKSQLQRPPEARANPRYRVPCHLLNEMDAANIELQMKRAECDSTNNSFELHLHLGPHYHFFNGALHPVVSQTESMWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSIAKFVPAGLHVYQTLDGDDLTLCETEIADGEDIFVWNGVEVGGIQIPTGSDCEPLLLNVLHLGTSSEGEESQQLVESPHVFPSNAELGTVFAALSVPEGVVLINSTTSLGEESWTALAKEDLKKTFREQGLRNGSTVLIQDSNDDSSFLTKQGKWITSTNEIDWLQVKNLCQLESEEEQVKISATLNTVVFDIRTKAIKELKLMKELAENSCLRPIDRKGKLLCPVPDSYTLKEAELKPGSLLGLCPGKAPTSSQLFLFFAVGSDVQPGTEMEIIVEETVSVRGCLKIMLEKSGLSGDTWHLRKMDWCFEAGEPLCEEDATLKELMICSGDTLLLIEGKLPPLGFLKVPIWWYQPRGPWRHWHHQDQMDCTFAQGAPGDRQAEVSLHYLGDIEISEDATLGELKSQALTLPNFSEFPVPSPAFLRAWTVEYKRPGRLLRVHQQQLKEYKLGKRTEICLEPLQKEEHLGPQDVLLRTQMRLPGKRAYALPVDLVWDTARGWTAGSLRQRVANFCSLPVEKIEIAKYFPEKFEWLPISSWNQQITKKKKKKKQDNLQGAPYYLKDGDTIGIKNLLLEDDDDFSTDGDDAGRGQQELLALGRKQSHEALRVQSSDNVSGAEMPARPRGPEASLSIRVGSFR", "length": 1222, "header": "tr|F1SM23-1|F1SM23_PIG Isoform 1 of Ubiquitin carboxyl-terminal hydrolase 40 OS=Sus scrofa OX=9823 GN=USP40 PE=3 SV=3 CANONICAL=F1SM23-1" }, "isoforms": [ { "isoform_ac": "F1SM23-1", "url": "https://www.uniprot.org/uniprotkb/F1SM23/entry#F1SM23-1", "sequence": { "sequence": "MFGDLFEEDYSSVSNNHYGKGKKLKTKTLEPSAPREFTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTIVNQVVCKDCKNVSEKQEDFLDLTVAVKNVSSLEDALWNMYVEEEVFDYDNLYHCGTCDKLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYMYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEDKSNPDVNLEDLQSEKEIDDPLMILKAILLQEESNQIPVDQLGQKLLKKKGVSWNKKYRKQYGPLRKFLQLHSQMFQLSSDERTVSLLKDRSLQAESDFQRSDQKTSTSESPGLNDRPSCPHWFDINDAKVQPIKEKDIEQQFQGKESAYMLFYRKSQLQRPPEARANPRYRVPCHLLNEMDAANIELQMKRAECDSTNNSFELHLHLGPHYHFFNGALHPVVSQTESMWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSIAKFVPAGLHVYQTLDGDDLTLCETEIADGEDIFVWNGVEVGGIQIPTGSDCEPLLLNVLHLGTSSEGEESQQLVESPHVFPSNAELGTVFAALSVPEGVVLINSTTSLGEESWTALAKEDLKKTFREQGLRNGSTVLIQDSNDDSSFLTKQGKWITSTNEIDWLQVKNLCQLESEEEQVKISATLNTVVFDIRTKAIKELKLMKELAENSCLRPIDRKGKLLCPVPDSYTLKEAELKPGSLLGLCPGKAPTSSQLFLFFAVGSDVQPGTEMEIIVEETVSVRGCLKIMLEKSGLSGDTWHLRKMDWCFEAGEPLCEEDATLKELMICSGDTLLLIEGKLPPLGFLKVPIWWYQPRGPWRHWHHQDQMDCTFAQGAPGDRQAEVSLHYLGDIEISEDATLGELKSQALTLPNFSEFPVPSPAFLRAWTVEYKRPGRLLRVHQQQLKEYKLGKRTEICLEPLQKEEHLGPQDVLLRTQMRLPGKRAYALPVDLVWDTARGWTAGSLRQRVANFCSLPVEKIEIAKYFPEKFEWLPISSWNQQITKKKKKKKQDNLQGAPYYLKDGDTIGIKNLLLEDDDDFSTDGDDAGRGQQELLALGRKQSHEALRVQSSDNVSGAEMPARPRGPEASLSIRVGSFR", "length": 1222, "header": "tr|F1SM23-1|F1SM23_PIG Isoform 1 of Ubiquitin carboxyl-terminal hydrolase 40 OS=Sus scrofa OX=9823 GN=USP40 PE=3 SV=3 CANONICAL=F1SM23-1" }, "locus": { "chromosome": "15", "start_pos": 133951609, "end_pos": 133872484, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017759.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017759.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017278.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017278.3" } ] } }, { "isoform_ac": "F1SM25-1", "url": "https://www.uniprot.org/uniprotkb/F1SM23/entry#F1SM25-1", "sequence": { "sequence": "MFRFVVLFSFICILQLLEFWEGDMVLSIAKFVPAGLHVYQTLDGDDLTLCETEIADGEDIFVWNGVEVGGIQIPTGSDCEPLLLNVLHLGTSSEGEESQQLVESPHVFPSNAELGTVFAALSVPEGVVLINSTTSLGEESWTALAKEDLKKTFREQGLRNGSTVLIQDSNDDSSFLTKQGKWITSTNEIDWLQVKNLCQLESEEEQVKISATLNTVVFDIRTKAIKELKLMKELAENSCLRPIDRKGKLLCPVPDSYTLKEAELKPGSLLGLCPGKAPTSSQLFLFFAVGSDVQPGTEMEIIVEETVSVRGCLKIMLEKSGLSGDTWHLRKMDWCFEAGEPLCEEDATLKELMICSGDTLLLIEGKLPPLGFLKVPIWWYQPRGPWRHWHHQDQMDCTFAQGGNWRTNSTWFANTAELQQPACHKEK", "length": 427, "header": "tr|F1SM25-1|F1SM25_PIG Computationally mapped isoform of Ubiquitin specific peptidase 40 OS=Sus scrofa OX=9823 GN=USP40 PE=4 SV=5 CANONICAL=F1SM23-1" }, "locus": { "chromosome": "15", "start_pos": 133912724, "end_pos": 133887209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017757.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017757.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017276.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017276.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154213", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154213", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "pmid": "" }, { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "pmid": "" }, { "name": "regulation of protein stability", "id": "GO:0031647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031647", "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "F1SM23", "url": "https://www.uniprot.org/uniprotkb/F1SM23" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1197, "end_pos": 1199, "annotation": "n_glycosylation_sequon" }, { "start_pos": 177, "end_pos": 179, "annotation": "n_glycosylation_sequon" }, { "start_pos": 194, "end_pos": 196, "annotation": "n_glycosylation_sequon" }, { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" }, { "start_pos": 522, "end_pos": 524, "annotation": "n_glycosylation_sequon" }, { "start_pos": 688, "end_pos": 690, "annotation": "n_glycosylation_sequon" }, { "start_pos": 717, "end_pos": 719, "annotation": "n_glycosylation_sequon" }, { "start_pos": 996, "end_pos": 998, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SM23", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM23" }, { "id": "PS50235", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50235" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "USP", "eco_id": "ECO_0000259", "start_pos": 41, "end_pos": 480, "start_aa": "Ser", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1197, "end_pos": 1199 }, { "start_pos": 177, "end_pos": 179 }, { "start_pos": 194, "end_pos": 196 }, { "start_pos": 39, "end_pos": 41 }, { "start_pos": 522, "end_pos": 524 }, { "start_pos": 688, "end_pos": 690 }, { "start_pos": 717, "end_pos": 719 }, { "start_pos": 996, "end_pos": 998 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SM26-1", "uniprot_ac": "F1SM26", "uniprot_id": "F1SM26_PIG", "mass": { "chemical_mass": 192286.0, "monoisotopic_mass": 192286.0 }, "refseq": {}, "gene_names": [ { "name": "MROH2A", "type": "recommended", "evidence": [ { "id": "F1SM26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM26" } ] } ], "protein_names": [ { "name": "Maestro heat like repeat family member 2A", "type": "synonym", "evidence": [ { "id": "F1SM26", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM26/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SM26", "url": "https://www.uniprot.org/uniprotkb/F1SM26" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MROH2A", "url": "https://www.uniprot.org/uniprotkb/F1SM26", "locus": { "chromosome": "15", "start_pos": 134103631, "end_pos": 134053685, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016305", "url": "https://www.ensembl.org/id/ENSSSCG00000016305" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016305", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016305", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045206", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045206", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048465", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048465", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055406", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055406", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055408", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055408", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056282", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056282", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23120:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23120:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21047", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21047", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23210", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23210", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23221", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23221", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SM26", "url": "https://www.uniprot.org/uniprotkb/F1SM26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM26-1", "url": "https://www.uniprot.org/uniprotkb/F1SM26-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCIKQRTELFLVVCFCSIQERILKKEFEEEMAEAAIESSEDPSEETEELEPLEPEDNGTFQQVSNLLNIMDGESVKTDTAGAGLDMRKMLASVIITEKATTEPSVVMNALIRCLQVPEISTQRKINIYSILQEIIQQEGELEERCVQRLVAIASREMRDILEMEGYLRAEVASDTLVALSRNHFSLVMYELQHHLKPLSLTDEFVILTLAKLANGNVFEFMPYMGITLATVFTMLRLANEAKMRQAICSAMETFCETVQFYLRHLEDSVYPVMTEEQFAMKLFPMYRYFVTVWLRNHNLEVKLGVIKSLKPMLSLLLPNDDLREQVYDYIPLLLAEYQGSLEALFITQVLRQILEMSVTTNTPIPPMQLHTIFTELHVQVCSRAPTQQQYSSQNLTEIVHCFIALARSYPKELMKFFLSQMEMSKEAIRVGTLNLIRAVVSADEPRMSIRTIYLATRVVKNTLSDTRSKVRMAILRIISQLALSGFQDRIKGWGLKYVSVQLTLSTYKLTNHRESCYQRDLEEKMVHKVTMDTVRVITSSVSGMTNEFWVRLLCYIMETDYTEALTPICISLTNLAERQLHTKDVEANATGKGRHVDLPAPQKLLARLLVLMSSPYKGEGRGIAMLNLLRTLSQSIAPSMADMWELEIPLLVKYLEEHTEFTWNQKTWEDKLIQFLRNSLKKTRGSNWSLRLSKELNNQIESFDSPSLEKGFLYRALGLTLAMGLEADKVEVLLLELLYRTDYSNDFDREGVILCFGLCARGQVKTVLNVLHDFEERIQESEQSWQRKDHPWRRETVKGALMVLYSCVASYCHPQMLLSYVDNPITTKIIHHYSSSCQDVCLKIAFMKSVVQVTGAVRNIKDLEDFPFAHKATLTGIIMAIIKAEPPDSLVSPVRTMAMDALSYLSKLRPYYSTEENSELMDIGIHSVISLQPPGENNESIKTLYVNALHALEQLMEGLMQRQLDPKGLQEMVHLLEKWILSEREWEREKAMNLHLHLMQIYVQSVGVCIPLKLGQFGSLVGLIAPCTCDSHRRTRLASMDVLSSLLDLHASQTCSSWGASKELELEKCKEDLQGSDTEKLVSASSRIAKVACLQFNCDEVVALIQKLCENIGAMDLQHDKASVTWIGIFLQMRVKELEDKVAEILGAILVHLPVVDQPEVRRLLIEGILLLAHHHQETVLTSLLRQPLPMESHLTEVWLAVAENVPFARTMLHGLMGRLQSRFTPRVNATSKADIWRLAAVDPLMTLCTIHLLIEKMDDKLPDLFPELVYTLLLQLSSSQGPEAVSPVLKTWRLVHKGTLPEEINPQRVAIKSMQLLFRRLRGDLLLYILEEQDVWTLLESSSTFLQGVSLLARLCLRNAEGYQQRLSELVLRGMASEVLSCRISSTAVCFMRDPILYREKLLKPAVLMLEKGVDQEDEALRVLSLRALGNMALGAPRKVRQYRKLLLEKCLCSLRGPVSPSVTSEGMEALAKVLAELREGDVGSAFDAISERCRTFFDNESELLRLKAFVLFGKLAKVVGISKKHFFKEEVKKAWVPLMLHCQDPCSDAAQACVATMFQCVQFWGWKALEGSLDQSNAIEAKEMTVFQITLCSMLTQKKPAVLYRFLLETMTYVRSNLSRIRIAACNLAGIIMNHMTAHYLKKLDFPSLRNSLQELQLDSDPGVWKAALETLKILDSCSQHRLLASPKGTS", "length": 1693, "header": "tr|F1SM26-1|F1SM26_PIG Isoform 1 of Maestro heat like repeat family member 2A OS=Sus scrofa OX=9823 GN=MROH2A PE=4 SV=5 CANONICAL=F1SM26-1" }, "isoforms": [ { "isoform_ac": "F1SM26-1", "url": "https://www.uniprot.org/uniprotkb/F1SM26/entry#F1SM26-1", "sequence": { "sequence": "MCIKQRTELFLVVCFCSIQERILKKEFEEEMAEAAIESSEDPSEETEELEPLEPEDNGTFQQVSNLLNIMDGESVKTDTAGAGLDMRKMLASVIITEKATTEPSVVMNALIRCLQVPEISTQRKINIYSILQEIIQQEGELEERCVQRLVAIASREMRDILEMEGYLRAEVASDTLVALSRNHFSLVMYELQHHLKPLSLTDEFVILTLAKLANGNVFEFMPYMGITLATVFTMLRLANEAKMRQAICSAMETFCETVQFYLRHLEDSVYPVMTEEQFAMKLFPMYRYFVTVWLRNHNLEVKLGVIKSLKPMLSLLLPNDDLREQVYDYIPLLLAEYQGSLEALFITQVLRQILEMSVTTNTPIPPMQLHTIFTELHVQVCSRAPTQQQYSSQNLTEIVHCFIALARSYPKELMKFFLSQMEMSKEAIRVGTLNLIRAVVSADEPRMSIRTIYLATRVVKNTLSDTRSKVRMAILRIISQLALSGFQDRIKGWGLKYVSVQLTLSTYKLTNHRESCYQRDLEEKMVHKVTMDTVRVITSSVSGMTNEFWVRLLCYIMETDYTEALTPICISLTNLAERQLHTKDVEANATGKGRHVDLPAPQKLLARLLVLMSSPYKGEGRGIAMLNLLRTLSQSIAPSMADMWELEIPLLVKYLEEHTEFTWNQKTWEDKLIQFLRNSLKKTRGSNWSLRLSKELNNQIESFDSPSLEKGFLYRALGLTLAMGLEADKVEVLLLELLYRTDYSNDFDREGVILCFGLCARGQVKTVLNVLHDFEERIQESEQSWQRKDHPWRRETVKGALMVLYSCVASYCHPQMLLSYVDNPITTKIIHHYSSSCQDVCLKIAFMKSVVQVTGAVRNIKDLEDFPFAHKATLTGIIMAIIKAEPPDSLVSPVRTMAMDALSYLSKLRPYYSTEENSELMDIGIHSVISLQPPGENNESIKTLYVNALHALEQLMEGLMQRQLDPKGLQEMVHLLEKWILSEREWEREKAMNLHLHLMQIYVQSVGVCIPLKLGQFGSLVGLIAPCTCDSHRRTRLASMDVLSSLLDLHASQTCSSWGASKELELEKCKEDLQGSDTEKLVSASSRIAKVACLQFNCDEVVALIQKLCENIGAMDLQHDKASVTWIGIFLQMRVKELEDKVAEILGAILVHLPVVDQPEVRRLLIEGILLLAHHHQETVLTSLLRQPLPMESHLTEVWLAVAENVPFARTMLHGLMGRLQSRFTPRVNATSKADIWRLAAVDPLMTLCTIHLLIEKMDDKLPDLFPELVYTLLLQLSSSQGPEAVSPVLKTWRLVHKGTLPEEINPQRVAIKSMQLLFRRLRGDLLLYILEEQDVWTLLESSSTFLQGVSLLARLCLRNAEGYQQRLSELVLRGMASEVLSCRISSTAVCFMRDPILYREKLLKPAVLMLEKGVDQEDEALRVLSLRALGNMALGAPRKVRQYRKLLLEKCLCSLRGPVSPSVTSEGMEALAKVLAELREGDVGSAFDAISERCRTFFDNESELLRLKAFVLFGKLAKVVGISKKHFFKEEVKKAWVPLMLHCQDPCSDAAQACVATMFQCVQFWGWKALEGSLDQSNAIEAKEMTVFQITLCSMLTQKKPAVLYRFLLETMTYVRSNLSRIRIAACNLAGIIMNHMTAHYLKKLDFPSLRNSLQELQLDSDPGVWKAALETLKILDSCSQHRLLASPKGTS", 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"database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM26", "url": "https://www.uniprot.org/uniprotkb/F1SM26" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": 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"MDSVEKTAHRSEHKSRKFLKSLIRKQPQELLLVMGTGVSAAVAPGIPALCSWRSCIEAVIEAAEQLEVLHPGDVAEFRRKVTKDRDLLVVAHDLIRKMSPRTGDTKPNFFQDCLMEVFDDLERHIQNPLVLQSILSLMERGAMVLTTNYDNLLEIFGQQQSKPMESLDLKDKTKVLQWARGHIRYGVLHIHGLYTDPCGMVLDPSGYKDVTQDPEVMEVLQNLYRTKSFLFVGCGETLRDQIFQALFLYSVPNRVDLEHYMVVLKESEDHFFKHQADMLLHGIKVVSYGDCFDYFPAYVQDLASQICQQPSPDAERVDSTTSLGNACQDCAKRKLEENGIEVSKKPRQSDTDDAGGS", "length": 357, "header": "tr|F1SM57-1|F1SM57_PIG Isoform 1 of Family with sequence similarity 118 member A OS=Sus scrofa OX=9823 GN=FAM118A PE=3 SV=3 CANONICAL=F1SM57-1" }, "locus": { "chromosome": "5", "start_pos": 4093402, "end_pos": 4071785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000015.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000015.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000015.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000015.3" } ] } }, { "isoform_ac": "I3LVE8-1", "url": "https://www.uniprot.org/uniprotkb/F1SM57/entry#I3LVE8-1", "sequence": { "sequence": "MDSVEKTAHRSEHKSRKFLKSLIRKQPQELLLVMGTGVSAAVAPGIPALCSWRSCIEAVIEAAEQLEVLHPGDVAEFRRKVTKDRDLLVVAHDLIRKMSPRTGDTKPNFFQDCLMEVFDDLERHIQNPLVLQSILSLMERGAMVLTTNYDNLLEIFGQQQSKPMESLDLKDKTKVLQWARGHIRYGVLHIHGLYTDPCGMVLDPSGYKDVTQDPEVMEVLQNLYRTKSFLFVGCGETLRDQIFQALFLYSVPNRVDLEHYMVVLKESEDHFFKHQADMLLHGIKVVSYGDCFDYFPAYVQDLASQICQQPSPGNACQDCAKRKLEENGIEVSKKPRQSDTDDAGGS", "length": 346, "header": "tr|I3LVE8-1|I3LVE8_PIG Computationally mapped isoform of Family with sequence similarity 118 member A OS=Sus scrofa OX=9823 GN=FAM118A PE=3 SV=2 CANONICAL=F1SM57-1" }, "locus": { "chromosome": "5", "start_pos": 4093402, "end_pos": 4071785, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022845.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022845.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028100.2", "url": "https://www.ensembl.org/id/ENSSSCP00000028100.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM57", "url": "https://www.uniprot.org/uniprotkb/F1SM57" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739727", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739727", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K3T5-1", "protein_name": "Family with sequence similarity 118, member A", "gene_name": "Fam118a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKACEDSQMESVEKTTNRSEQKCRKFLKSLIRKQPQDLLLVIGTGVSAAVAPGIRALCSWRSCIEAVIEAAEQLEVLHPGDVAEFRRKVMKDRDLLVVAHDLIRKMSPRTGDTKPNFFQDCLMEVFDSLEQHIQNPVVLQSILSLMDRGTMVLTTNYDNLLEIFGQQQSKPMESLDLKDKTKVLQWARGHIKYGVLHIHGLYTDPCGMVLDPSGYKDVTQDAEVMEVLQNLYRTKSFLFVGCGETLRDQIFQALFLYSVPNKVDLEHYMVVLKENEDHFFKHQADMLLHGIKVVSYGDCFELFPGYVQDLATQICKQRSPDAERVDSTTLLGNACQDCAKRKLEENGIEVTKKVRQSDTDDAGGS", "length": 366 }, "evidence": [ { "id": "F1SM57", "url": "https://omabrowser.org/oma/group/F1SM57/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7JBW0-1", "protein_name": "Protein FAM118A isoform X1", "gene_name": "Fam118a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": 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"MESVEKTTNRSEQKCRKFLKSLIRKQPQDLLLVIGTGVSAAVAPGIRALCSWRSCIEAVIEAAEQLEVLHPGDVAEFRRKVMKDRDLLVVAHDLIRKMSPRTGDTKPNFFQDCLMEVFDSLEQHIQNPVVLRSILSLMDRGTMVLTTNYDNLLEIFGQQQSKPMESLDLKDKTKVLQWARGHIKYGVLHIHGLYTDPCGMVLDPSGYKDVTQDPEVMEVLQNLYRTKSFLFVGCGETLRDQIFQALFLYSVPNKVDLEHYMVVLKENEDHFFKHQADMLLHGIKVVSYGDCFDLFPGYVQDLATQICKQRSPDAERVDSTTLLGNACQDCAKRKLEENGIEVTKKVRQSDTDDAGGS", "length": 357 }, "evidence": [ { "id": "F1SM57", "url": "https://omabrowser.org/oma/group/F1SM57/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NWS6-1", "protein_name": "Protein FAM118A", "gene_name": "FAM118A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDSVEKTTNRSEQKSRKFLKSLIRKQPQELLLVIGTGVSAAVAPGIPALCSWRSCIEAVIEAAEQLEVLHPGDVAEFRRKVTKDRDLLVVAHDLIRKMSPRTGDAKPSFFQDCLMEVFDDLEQHIRSPVVLQSILSLMDRGAMVLTTNYDNLLEAFGRRQNKPMESLDLKDKTKVLEWARGHMKYGVLHIHGLYTDPCGVVLDPSGYKDVTQDAEVMEVLQNLYRTKSFLFVGCGETLRDQIFQALFLYSVPNKVDLEHYMLVLKENEDHFFKHQADMLLHGIKVVSYGDCFDHFPGYVQDLATQICKQQSPDADRVDSTTLLGNACQDCAKRKLEENGIEVSKKRTQSDTDDAGGS", "length": 357 }, "evidence": [ { "id": "F1SM57", "url": "https://omabrowser.org/oma/group/F1SM57/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1SM57", "url": "https://www.uniprot.org/uniprotkb/F1SM57" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], 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"F1SM62_PIG", "mass": { "chemical_mass": 45415.0, "monoisotopic_mass": 45415.0 }, "refseq": {}, "gene_names": [ { "name": "RIBC2", "type": "recommended", "evidence": [ { "id": "F1SM62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM62" } ] } ], "protein_names": [ { "name": "RIB43A domain with coiled-coils 2", "type": "synonym", "evidence": [ { "id": "F1SM62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM62/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SM62", "url": "https://www.uniprot.org/uniprotkb/F1SM62" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RIBC2", "url": "https://www.uniprot.org/uniprotkb/F1SM62", "locus": { "chromosome": "5", "start_pos": 3966440, "end_pos": 3975830, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024718", "url": "https://www.ensembl.org/id/ENSSSCG00000024718" } ] } } ], "crossref": [ { "id": "F1SM62", "url": "https://alphafold.ebi.ac.uk/entry/F1SM62", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024718", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024718", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "9CPC", "url": "https://www.ncbi.nlm.nih.gov/Structure/icn3d/?mmdbid=9CPC&bu=0", "database": "iCn3D", "categories": [ "3D Structure" ] }, { "id": "IPR008805", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008805", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR14517", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14517", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14517:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14517:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "pdb_00009cpc", "url": "https://www.rcsb.org/structure/pdb_00009cpc", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "9CPC", "url": "https://www.rcsb.org/structure/9CPC", "database": "PDB", "categories": [ "3D Structure" ] }, { "id": "PF05914", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05914", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SM62", "url": "https://www.uniprot.org/uniprotkb/F1SM62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM62-1", "url": "https://www.uniprot.org/uniprotkb/F1SM62-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "GDFAVMEVAQPKDLEEDFGQAKKRHAELCRQKRIFNARNRIFGGDIDAWNVQVCDQKIREATEKARQETFAAEMRQNDKITCILEDRARRDRKTLCKAISDFQQSFQKPETRREFDLSDPLALKKDLPARQSDNDARNTVSGMQKFMGEDLNFHQRRKFQEEQNREWSLQQQREWKIAREDQKHAEDLYLETRLQFDETAKHLQNLEGTTRKAVCAAVKEFNKNQALESAEKKRQERKQEQEDNLAEITNLLRGDLLSEDPQQAASSFGPHRVVPDRWKGMTQEQLEQIRLVQKQQVQEKLRLQEEERQRDMDWDRQRVQKARATLLSERQLQRQQRALRRALDGSNLSLAKEQLLQKKYMKEIYTNQPTEDYFTQFNTRSR", "length": 382, "header": "tr|F1SM62-1|F1SM62_PIG Isoform 1 of RIB43A domain with coiled-coils 2 OS=Sus scrofa OX=9823 GN=RIBC2 PE=1 SV=4 CANONICAL=F1SM62-1" }, "isoforms": [ { "isoform_ac": "F1SM62-1", "url": "https://www.uniprot.org/uniprotkb/F1SM62/entry#F1SM62-1", "sequence": { "sequence": "GDFAVMEVAQPKDLEEDFGQAKKRHAELCRQKRIFNARNRIFGGDIDAWNVQVCDQKIREATEKARQETFAAEMRQNDKITCILEDRARRDRKTLCKAISDFQQSFQKPETRREFDLSDPLALKKDLPARQSDNDARNTVSGMQKFMGEDLNFHQRRKFQEEQNREWSLQQQREWKIAREDQKHAEDLYLETRLQFDETAKHLQNLEGTTRKAVCAAVKEFNKNQALESAEKKRQERKQEQEDNLAEITNLLRGDLLSEDPQQAASSFGPHRVVPDRWKGMTQEQLEQIRLVQKQQVQEKLRLQEEERQRDMDWDRQRVQKARATLLSERQLQRQQRALRRALDGSNLSLAKEQLLQKKYMKEIYTNQPTEDYFTQFNTRSR", "length": 382, "header": "tr|F1SM62-1|F1SM62_PIG Isoform 1 of RIB43A domain with coiled-coils 2 OS=Sus scrofa OX=9823 GN=RIBC2 PE=1 SV=4 CANONICAL=F1SM62-1" }, "locus": { "chromosome": "5", "start_pos": 3975830, "end_pos": 3966509, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000010.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000010.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000010.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000010.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM62", "url": "https://www.uniprot.org/uniprotkb/F1SM62" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] }, { "title": "Structural diversity of axonemes across mammalian motile cilia.", "journal": "Nature", "date": "2025", "authors": "Leung Miguel Ricardo, Sun Chen, Zeng Jianwei, Anderson Jacob R, Niu Qingwei, Huang Wei, Noteborn Willem E M, Brown Alan, Zeev-Ben-Mordehai Tzviya, Zhang Rui", "evidence": [ { "database": "UniProtKB", "id": "F1SM62", "url": "https://www.uniprot.org/uniprotkb/F1SM62" } ], "reference": [ { "type": "PubMed", "id": "39743588", "url": "https://glygen.org/publication/PubMed/39743588" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "flagellated sperm motility", "id": "GO:0030317", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030317", "evidence": [ { "database": "UniProtKB", "id": "F1SM62", "url": "https://www.uniprot.org/uniprotkb/F1SM62" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "sperm flagellum", "id": "GO:0036126", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036126", "evidence": [ { "database": "UniProtKB", "id": "F1SM62", "url": "https://www.uniprot.org/uniprotkb/F1SM62" } ], "pmid": "" }, { "name": "axonemal A tubule inner sheath", "id": "GO:0160111", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160111", "evidence": [ { "database": "UniProtKB", "id": "F1SM62", "url": "https://www.uniprot.org/uniprotkb/F1SM62" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 347, "end_pos": 349, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SM62-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 382, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SM62-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SM62" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], 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"start_pos": 3296307, "end_pos": 3292022, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000005", "url": "https://www.ensembl.org/id/ENSSSCG00000000005" } ] } } ], "crossref": [ { "id": "F1SM77", "url": "https://alphafold.ebi.ac.uk/entry/F1SM77", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000005", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000005", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518729", "url": "https://www.ncbi.nlm.nih.gov/gene/100518729", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR018785", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018785", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042426", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042426", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518729", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518729", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CDMHELV", "url": "https://omabrowser.org/oma/group/CDMHELV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SM77", "url": "https://www.orthodb.org/?gene=F1SM77", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31849", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31849", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31849:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31849:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10170", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10170", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003126001", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126001", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SM77", "url": "https://www.uniprot.org/uniprotkb/F1SM77", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM77-1", "url": "https://www.uniprot.org/uniprotkb/F1SM77-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MACEAEHSPLGMFECQLCALTAPYSYVGQRPPYTQSIVLLEESYVMKDPFTSDKDRFLILGSRCSLCGRLVCVGPECSLFYCRRFCLPCAQENAAAFPPEVQQDLEKKKSPRKRPSSQHGSRT", "length": 123, "header": "tr|F1SM77-1|F1SM77_PIG Isoform 1 of Cysteine-rich DPF motif domain-containing protein 1 OS=Sus scrofa OX=9823 GN=CDPF1 PE=3 SV=1 CANONICAL=F1SM77-1" }, "isoforms": [ { "isoform_ac": "F1SM77-1", "url": "https://www.uniprot.org/uniprotkb/F1SM77/entry#F1SM77-1", "sequence": { "sequence": "MACEAEHSPLGMFECQLCALTAPYSYVGQRPPYTQSIVLLEESYVMKDPFTSDKDRFLILGSRCSLCGRLVCVGPECSLFYCRRFCLPCAQENAAAFPPEVQQDLEKKKSPRKRPSSQHGSRT", "length": 123, "header": "tr|F1SM77-1|F1SM77_PIG Isoform 1 of Cysteine-rich DPF motif domain-containing protein 1 OS=Sus scrofa OX=9823 GN=CDPF1 PE=3 SV=1 CANONICAL=F1SM77-1" }, "locus": { "chromosome": "5", "start_pos": 3294190, "end_pos": 3292148, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000006.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000006.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000006.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000006.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM77", "url": "https://www.uniprot.org/uniprotkb/F1SM77" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518729", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518729", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7IAG9-1", "protein_name": "Cysteine-rich DPF motif domain-containing protein 1", "gene_name": "Cdpf1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASEAEPRLLGMFECQLCALTAPYSYVGQKPPDTHAVVLLEESYIMKDPFSSDKARFLVLGSRCSVCGKLVCVGPDCSLFYSKRVCLPCVQENISAFPQEIQQDVEKRKGASKKPSSHP", "length": 119 }, "evidence": [ { "id": "F1SM77", "url": "https://omabrowser.org/oma/group/F1SM77/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0VCH3-1", "protein_name": "Cysteine-rich DPF motif domain-containing protein 1", "gene_name": "CDPF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MACETERTPLGVFKCQLCALTAPYSYQGRQPPDSQSVVLLEESYVMRDPFTPDKGRFLVVGSRCSMCGRLVCVGPECSLFYSKRFCLPCVQDNVDAFPQEIQQDLEKRKVPFTRPASQRSS", "length": 121 }, "evidence": [ { "id": "F1SM77", "url": "https://omabrowser.org/oma/group/F1SM77/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5RGZ1-1", "protein_name": "Cysteine-rich DPF motif domain-containing protein 1", "gene_name": "cdpf1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLTEGSALGVFSCQLCEVSSPYSFYGQKPPNTRAIVLLEECFGIKDPFSPEREKFLILGSKCSLCSKTVCVGTVRRSCDSQSEAKL", "length": 87 }, "evidence": [ { "id": "F1SM77", "url": "https://omabrowser.org/oma/group/F1SM77/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6NVV7-1", "protein_name": "Cysteine-rich DPF motif domain-containing protein 1", "gene_name": "CDPF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASHVECRPLGVFECELCTLTAPYSYVGQKPPNTQSMVLLEESYVMKDPFTSDKDRFLVLGSCCSLCSRLVCVGPECSLFYSKRFCLPCVRENINAFPQEIRQDLEKRKAPSKRTPSQPGSRT", "length": 123 }, "evidence": [ { "id": "F1SM77", "url": "https://omabrowser.org/oma/group/F1SM77/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R3A2-1", "protein_name": "Cysteine-rich DPF motif domain-containing protein 1", "gene_name": "Cdpf1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASETEPRPLGTFECQLCALSAPYSYVGQKPPDTQAVVLLEESYIMKDPFSSDKARFLVLGSRCSVCSRLVCVGPDCSLFYSKRVCLPCVQENMSAFPQEIQQDVEKRKSTSKKHSNRP", "length": 119 }, "evidence": [ { "id": "F1SM77", "url": "https://omabrowser.org/oma/group/F1SM77/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VHN3-1", "protein_name": "Cysteine-rich DPF motif domain-containing protein 1", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDPDDDLVLENEAEEIERLQLPEELKKPIDPEEEDERVARIEFNCSGCEMHEMVHYFGRKPPFALGVIYPEDNYVMRDPFQPPPPRWQSKPEYYIAMGTKCSICSKTVCKDPGCSFYYTASFCLPCGKEELKNWPPEAQARIRKQMSVSQGRQT", "length": 154 }, "evidence": [ { "id": "F1SM77", "url": "https://omabrowser.org/oma/group/F1SM77/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SM77-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 123, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": 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"authors" ] } ] }, { "uniprot_canonical_ac": "F1SM81-1", "uniprot_ac": "F1SM81", "uniprot_id": "F1SM81_PIG", "mass": { "chemical_mass": 52803.0, "monoisotopic_mass": 52803.0 }, "refseq": {}, "gene_names": [ { "name": "TTC38", "type": "recommended", "evidence": [ { "id": "F1SM81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM81" } ] } ], "protein_names": [ { "name": "Tetratricopeptide repeat protein 38", "type": "recommended", "evidence": [ { "id": "F1SM81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM81/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SM81", "url": "https://www.uniprot.org/uniprotkb/F1SM81" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TTC38", "url": 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Classification" ] }, { "id": "PTHR16263", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16263", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16263:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16263:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A287AH70", "url": "https://www.uniprot.org/uniprotkb/A0A287AH70", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AH70-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AH70-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANX1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANX1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANX1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANX1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM81", "url": "https://www.uniprot.org/uniprotkb/F1SM81", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SM81-1", "url": "https://www.uniprot.org/uniprotkb/F1SM81-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAAPLRDCQAWKDTGLPLSTTSNEACKLFDATLTQYVKWTNDQSLGGIEGCLSKLKAADPTFAMGHAIANGLVLIGTGNSVRLDRELDLAVAKMVEISKTQPLTQREQLHVAAVETFAKGNFPKACDLWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARVYPFWTPDIPLSSYVKGIYSFGLMETNFYDRAEKLAKEALSIDPTDAWSVHTIAHIHEMKAEVQDGLEFMQRSETHWKESDMLACHNYWHWALYLIEKGEPEAALTMYDDHILPSLRASGAMLDVVDSCSMLYRLQMEGVSVGERWQDVLAVTRKHSRDHILLFNDAHFLMASLGARDPQTTQELLTTLQDASESPGENCQHLLARDVGLPLCQALVEAQNGNPDRVVELLLPIRYRLVQIGGSNAQTFQRDVFNQLLIHAALNCSSGVHKNVARSLLMERDALKPNSPLTARLIRKAAAVHLLQ", "length": 472, "header": "tr|F1SM81-1|F1SM81_PIG Isoform 1 of Tetratricopeptide repeat protein 38 OS=Sus scrofa OX=9823 GN=TTC38 PE=1 SV=2 CANONICAL=F1SM81-1" }, "isoforms": [ { "isoform_ac": "A0A287AH70-1", "url": "https://www.uniprot.org/uniprotkb/F1SM81/entry#A0A287AH70-1", "sequence": { "sequence": "MLGISIFVAWGVGVRVFVWRAPWSKSPSCCVQAWKDTGLPLSTTSNEACKLFDATLTQYVKWTNDQSLGGIEGCLSKLKAADPTFAMGHAIANGLVLIGTGNSVRLDRELDLAVAKMVEISKTQPLTQREQLHVAAVETFAKGNFPKACDLWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARVYPFWTPDIPLSSYVKGIYSFGLMETNFYDRAEKLAKEALSIDPTDAWSVHTIAHIHEMKAEVQDGLEFMQRSETHWKESDMLACHNYWHWALYLIEKGEPEAALTMYDDHILPSLRASGAMLDVVDSCSMLYRLQMEGVSVGERWQDVLAVTRKHSRDHILLFNDAHFLMASLGARDPQTTQELLTTLQDASESPGENCQHLLARDVGLPLCQALVEAQNGNPDRVVELLLPIRYRLVQIGGSNAQRDVFNQLLIHAALNCSSGVHKNVARSLLMERDALKPNSPLTARLIRKAAAVHLLQ", "length": 490, "header": "tr|A0A287AH70-1|A0A287AH70_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 38 OS=Sus scrofa OX=9823 GN=TTC38 PE=1 SV=1 CANONICAL=F1SM81-1" }, "locus": { "chromosome": "5", "start_pos": 3269797, "end_pos": 3249205, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064304.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064304.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043228.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043228.1" } ] } }, { "isoform_ac": "A0A287ANX1-1", "url": "https://www.uniprot.org/uniprotkb/F1SM81/entry#A0A287ANX1-1", "sequence": { "sequence": "MLGISIFVAWGVGVRVFVWRAPWSKSPSCCVQAWKDTGLPLSTTSNEACKLFDATLTQYVKWTNDQSLGGIEGCLSKLKAADPTFAMGHAIANGLVLIGTGNSVRLDRELDLAVAKMVEISKTQPLTQREQLHVAAVETFAKGNFPKACDLWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARVYPFWTPDIPLSSYVKGIYSFGLMETNFYDRAEKLAKEALSIDPTDAWSVHTIAHIHEMKAEVQDGLEFMQRSETHWKESDMLACHNYWHWALYLIEKILPSLRASGAMLDVVDSCSMLYRLQMEGVSVGERWQDVLAVTRKHSRDHILLFNDAHFLMASLGARDPQTTQELLTTLQDASESPGENCQHLLARDVGLPLCQALVEAQNGNPDRVVELLLPIRYRLVQIGGSNAQRDVFNQLLIHAALNCSSGVHKNVARSLLMERDALKPNSPLTARLIRKAAAVHLLQ", "length": 477, "header": "tr|A0A287ANX1-1|A0A287ANX1_PIG Computationally mapped isoform of Tetratricopeptide repeat protein 38 OS=Sus scrofa OX=9823 GN=TTC38 PE=1 SV=1 CANONICAL=F1SM81-1" }, "locus": { "chromosome": "5", "start_pos": 3269797, "end_pos": 3249205, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052628.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052628.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045763.1", "url": "https://www.ensembl.org/id/ENSSSCP00000045763.1" } ] } }, { "isoform_ac": "F1SM81-1", "url": "https://www.uniprot.org/uniprotkb/F1SM81/entry#F1SM81-1", "sequence": { "sequence": "MAAAAPLRDCQAWKDTGLPLSTTSNEACKLFDATLTQYVKWTNDQSLGGIEGCLSKLKAADPTFAMGHAIANGLVLIGTGNSVRLDRELDLAVAKMVEISKTQPLTQREQLHVAAVETFAKGNFPKACDLWEQILQDHPTDMLALKFSHDAYFYLGYQEQMRDSVARVYPFWTPDIPLSSYVKGIYSFGLMETNFYDRAEKLAKEALSIDPTDAWSVHTIAHIHEMKAEVQDGLEFMQRSETHWKESDMLACHNYWHWALYLIEKGEPEAALTMYDDHILPSLRASGAMLDVVDSCSMLYRLQMEGVSVGERWQDVLAVTRKHSRDHILLFNDAHFLMASLGARDPQTTQELLTTLQDASESPGENCQHLLARDVGLPLCQALVEAQNGNPDRVVELLLPIRYRLVQIGGSNAQTFQRDVFNQLLIHAALNCSSGVHKNVARSLLMERDALKPNSPLTARLIRKAAAVHLLQ", "length": 472, "header": "tr|F1SM81-1|F1SM81_PIG Isoform 1 of Tetratricopeptide repeat protein 38 OS=Sus scrofa OX=9823 GN=TTC38 PE=1 SV=2 CANONICAL=F1SM81-1" }, "locus": { "chromosome": "5", "start_pos": 3270754, "end_pos": 3249205, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000004.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000004.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000004.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000004.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 212, "start_aa": "Thr", "end_pos": 212, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr212", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM81", "url": "https://www.uniprot.org/uniprotkb/F1SM81" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 431, "end_pos": 433, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SM81-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 472, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SM81-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SM81" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 212 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 431, "end_pos": 433 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SM83-1", "uniprot_ac": "F1SM83", "uniprot_id": "F1SM83_PIG", "mass": { "chemical_mass": 68900.0, "monoisotopic_mass": 68900.0 }, "refseq": {}, "gene_names": [ { "name": "GTSE1", "type": "recommended", "evidence": [ { "id": "F1SM83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM83" } ] } ], "protein_names": [ { "name": "G2 and S-phase expressed 1", "type": "synonym", "evidence": [ { "id": "F1SM83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SM83/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SM83", "url": "https://www.uniprot.org/uniprotkb/F1SM83" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GTSE1", "url": "https://www.uniprot.org/uniprotkb/F1SM83", "locus": { "chromosome": "5", "start_pos": 3227816, "end_pos": 3242789, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000002", "url": "https://www.ensembl.org/id/ENSSSCG00000000002" } ] } } ], "crossref": [ { "id": "F1SM83", "url": "https://alphafold.ebi.ac.uk/entry/F1SM83", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000002", "url": 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"MQEPEEKPLPPQRGVVLLADEKFDFDLSLSSSSANEDDEVFFGPIGHRERCVAASLELKELNGQIPKEPPPPPSESRLAWSPLTGEKFVEVYKEAHLLALQIQSSSKNQAAQAAKPEGPGSQGADGFIQESALKINLFEKENEAEKSPRSLKRETYCLSAGAPPGLGLGQTRGPPEPRPAPPPNQAGPQKKVTSKLPPPRASSHRGKSIPWAVEKPVKERPASLSSVKTLHDKEALGTVPADRPLAAQDVSGLPASGGPAVPGKRSLPVPNKVDCVSPLPAKSGDHPSLPAGSSRPDPGQSGRTGLAVPPPALQAGPVAEARGQGQRSGPAAWTAEQPRAPSSGPLARPHTPGQGGPGLSSHLGLAPSSQTQATGGARGRGSCLTSKTKVTATPTDQFKVPKFSAGEPPGGATPRSSRAQRPQSCTAVGGNEVVHSTPARRSLASQSLVGSMGTPVSARRMSALPTPASRRLSSLALVTPQTMPRALASPLCVSARRLASEPQKKSAVRAAPATERQGRVASGLSDTSLDGSFSPASAVPQALSFSPEKSDFTFSKSIATEVRAAAVPGGSGLPVPAVLVDVQLEQLRIGPAAAGDLPLIDFCAPPEASAALGAGGGPLVDLLTNTPGAERGAAAKPPLEAGQLIDLSSPLILLSPEADKENVESPLLKF", "length": 670, "header": "tr|F1SM83-1|F1SM83_PIG Isoform 1 of G2 and S-phase expressed 1 OS=Sus scrofa OX=9823 GN=GTSE1 PE=4 SV=4 CANONICAL=F1SM83-1" }, "isoforms": [ { "isoform_ac": "F1SM83-1", "url": "https://www.uniprot.org/uniprotkb/F1SM83/entry#F1SM83-1", "sequence": { "sequence": "MQEPEEKPLPPQRGVVLLADEKFDFDLSLSSSSANEDDEVFFGPIGHRERCVAASLELKELNGQIPKEPPPPPSESRLAWSPLTGEKFVEVYKEAHLLALQIQSSSKNQAAQAAKPEGPGSQGADGFIQESALKINLFEKENEAEKSPRSLKRETYCLSAGAPPGLGLGQTRGPPEPRPAPPPNQAGPQKKVTSKLPPPRASSHRGKSIPWAVEKPVKERPASLSSVKTLHDKEALGTVPADRPLAAQDVSGLPASGGPAVPGKRSLPVPNKVDCVSPLPAKSGDHPSLPAGSSRPDPGQSGRTGLAVPPPALQAGPVAEARGQGQRSGPAAWTAEQPRAPSSGPLARPHTPGQGGPGLSSHLGLAPSSQTQATGGARGRGSCLTSKTKVTATPTDQFKVPKFSAGEPPGGATPRSSRAQRPQSCTAVGGNEVVHSTPARRSLASQSLVGSMGTPVSARRMSALPTPASRRLSSLALVTPQTMPRALASPLCVSARRLASEPQKKSAVRAAPATERQGRVASGLSDTSLDGSFSPASAVPQALSFSPEKSDFTFSKSIATEVRAAAVPGGSGLPVPAVLVDVQLEQLRIGPAAAGDLPLIDFCAPPEASAALGAGGGPLVDLLTNTPGAERGAAAKPPLEAGQLIDLSSPLILLSPEADKENVESPLLKF", "length": 670, "header": "tr|F1SM83-1|F1SM83_PIG Isoform 1 of G2 and S-phase expressed 1 OS=Sus scrofa OX=9823 GN=GTSE1 PE=4 SV=4 CANONICAL=F1SM83-1" }, "locus": { "chromosome": "5", "start_pos": 3242789, "end_pos": 3228199, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000003.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000003.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000003.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000003.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 466, "start_aa": "Thr", "end_pos": 466, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr466", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": 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"length": 2055, "header": "tr|F1SM99-1|F1SM99_PIG Isoform 1 of Ankyrin repeat domain 12 OS=Sus scrofa OX=9823 GN=ANKRD12 PE=4 SV=2 CANONICAL=F1SM99-1" }, "isoforms": [ { "isoform_ac": "A0A287BHM7-1", "url": "https://www.uniprot.org/uniprotkb/F1SM99/entry#A0A287BHM7-1", "sequence": { "sequence": "MPKSGFAKPVQSENSDSDSNMVEKSYGRKSKDKIASYSKTPKIDRSDVGKEMKEKSSMKRKLPFTISPSRNEERDSDTEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKREVPLSDDDESYTDSEEARSVNPSSVDENIDSETEKDSLICESKQIVPSKAPLPSALDEYEFKDDDDEEINKMIDDRHILRKELRKENESEVEKNSLFAKQEKAFYPKSFKSKKQKPSRVLYSSSESSDEEILQNKKCSTPSSVPETSNSDIQTKKEYGISSEHKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRVTNLTVNTAVDCSEKAREEGNFRKSFSPKDDTSLHLFHISTGKSPKHCCGLSEKQSTPLKQEHSKTCLSPGSSEMSLQPDLVRYDNTESEFLPESSSVKSCKHKDKNKHQKDFHLEFGEKSNAKVKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKNRDGAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKLEKSIKDDKSTKEKHVSKERNFKEEREKVKKESEKSFKEEKIKDLKDERENIPTDKETEFSSLGISASEESVGFHSVEKEIEIEKHIKESKEKFEKRFQTKEKDIEKAERKNSEKEKKIKHEHKSEKDRLDLSECIDRIKEKDKLYSHHTEKCHKESEKVKNFTTIKKTDDRDKSREKMDRKHDKEKPEKERHLAESKEKHSVEKKTKQSDSGDFARSEKSKSKEKDREVDKKEKSRDSVNITNSKHFQEERKSSIADSNKAQHEKTLYLKEKTKDEPLKTPDGKEKDKKDIDRYKERDKHKDKIQLNSSLKLKLEVEKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHRKHKEKIKQKEKERLRNRNCLELKVKDKEKTKHSLAEFKNKELTRSKSSELTDAYTKEKQSKDAISNRSQSVDTKNPVSLGKSSFVSENSLNRSPRSESEKLGLSSRSVSMISVASSEDSCHTTVTTPRPPVEYDSDFMLEGSDSQMSFSQSPFLPVAKSPALHERELDSLAELPERIKASYTSRLPASHIRSASVEDVKLVLSEGRPTVEVRRCSMPSAICEHTKQFQATSEESNQDGLALPREVCASPRPEASSNVPERELSSASNIHSSFAASPAMSVNSKYTSADINVIKSSAPVVTLVDSPIHLEPSNQVGVIQNKAWEIPVDRLGPLSTSDFICSNSCTPDQDSSVQGFCNSENKILKEQNIDFLPLHQTELPGNTCAQDAASFLPSQQPCSSHSQSLSDAESISKHMSLSYVTSQEPGILQQKNAIQMINAVLDTDNESTKDRENTFVLADVQKTDAFTPVYSESTVQEAAPNFEKANSLPVLPLEKDFNGSDASSQPNTHYALSKLLYKSSSSHEVENSTSDIQVISHEKEKLESVVLTHLHVKCDSDLCEINAGVPKGNLHEQDNPKHCSESLKCLLSIEDEESQQSTLSSLENHSQPSAQPEMHKYGHLVKVELEESAEDDKTENQIPQRMTRNKANTVANQSKQILASCPLLPDKDSESSSPRGRIRLTEEDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIQPYSSERANPYFEYLHIRKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRMKLRLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYSVPLDAQSDDSKTSVRDRFNARQFMSWLQDVDDKFDKLKTCLLMRQQHEAAALNAVQRLEWQLKLQELDPATYKSISIYEIQEFYVPLVDVNDDFELTPI", "length": 2032, "header": "tr|A0A287BHM7-1|A0A287BHM7_PIG Computationally mapped isoform of Ankyrin repeat domain 12 OS=Sus scrofa OX=9823 GN=ANKRD12 PE=4 SV=2 CANONICAL=F1SM99-1" }, "locus": { "chromosome": "6", "start_pos": 98790409, "end_pos": 98699804, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053210.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053210.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055866.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055866.2" } ] } }, { "isoform_ac": "F1SM99-1", "url": "https://www.uniprot.org/uniprotkb/F1SM99/entry#F1SM99-1", "sequence": { "sequence": "MPKSGFAKPVQSENSDSDSNMVEKSYGRKSKDKIASYSKTPKIDRSDVGKEMKEKSSMKRKLPFTISPSRNEERDSDTDSDPGHTSENWGERLISSYRTYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKREVPLSDDDESYTDSEEARSVNPSSVDENIDSETEKDSLICESKQIVPSKAPLPSALDEYEFKDDDDEEINKMIDDRHILRKELRKENESEVEKNSLFAKQEKAFYPKSFKSKKQKPSRVLYSSSESSDEEILQNKKCSTPSSVPETSNSDIQTKKEYGISSEHKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRVTNLTVNTAVDCSEKAREEGNFRKSFSPKDDTSLHLFHISTGKSPKHCCGLSEKQSTPLKQEHSKTCLSPGSSEMSLQPDLVRYDNTESEFLPESSSVKSCKHKDKNKHQKDFHLEFGEKSNAKVKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKNRDGAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKLEKSIKDDKSTKEKHVSKERNFKEEREKVKKESEKSFKEEKIKDLKDERENIPTDKETEFSSLGISASEESVGFHSVEKEIEIEKHIKESKEKFEKRFQTKEKDIEKAERKNSEKEKKIKHEHKSEKDRLDLSECIDRIKEKDKLYSHHTEKCHKESEKVKNFTTIKKTDDRDKSREKMDRKHDKEKPEKERHLAESKEKHSVEKKTKQSDSGDFARSEKSKSKEKDREVDKKEKSRDSVNITNSKHFQEERKSSIADSNKAQHEKTLYLKEKTKDEPLKTPDGKEKDKKDIDRYKERDKHKDKIQLNSSLKLKLEVEKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHRKHKEKIKQKEKERLRNRNCLELKVKDKEKTKHSLAEFKNKELTRSKSSELTDAYTKEKQSKDAISNRSQSVDTKNPVSLGKSSFVSENSLNRSPRSESEKLGLSSRSVSMISVASSEDSCHTTVTTPRPPVEYDSDFMLEGSDSQMSFSQSPFLPVAKSPALHERELDSLAELPERIKASYTSRLPASHIRSASVEDVKLVLSEGRPTVEVRRCSMPSAICEHTKQFQATSEESNQDGLALPREVCASPRPEASSNVPERELSSASNIHSSFAASPAMSVNSKYTSADINVIKSSAPVVTLVDSPIHLEPSNQVGVIQNKAWEIPVDRLGPLSTSDFICSNSCTPDQDSSVQGFCNSENKILKEQNIDFLPLHQTELPGNTCAQDAASFLPSQQPCSSHSQSLSDAESISKHMSLSYVTSQEPGILQQKNAIQMINAVLDTDNESTKDRENTFVLADVQKTDAFTPVYSESTVQEAAPNFEKANSLPVLPLEKDFNGSDASSQPNTHYALSKLLYKSSSSHEVENSTSDIQVISHEKEKLESVVLTHLHVKCDSDLCEINAGVPKGNLHEQDNPKHCSESLKCLLSIEDEESQQSTLSSLENHSQPSAQPEMHKYGHLVKVELEESAEDDKTENQIPQRMTRNKANTVANQSKQILASCPLLPDKDSESSSPRGRIRLTEEDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIQPYSSERANPYFEYLHIRKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRMKLRLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYSVPLDAQSDDSKTSVRDRFNARQFMSWLQDVDDKFDKLKTCLLMRQQHEAAALNAVQRLEWQLKLQELDPATYKSISIYEIQEFYVPLVDVNDDFELTPI", "length": 2055, "header": "tr|F1SM99-1|F1SM99_PIG Isoform 1 of Ankyrin repeat domain 12 OS=Sus scrofa OX=9823 GN=ANKRD12 PE=4 SV=2 CANONICAL=F1SM99-1" }, "locus": { "chromosome": "6", "start_pos": 98790409, "end_pos": 98699804, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063849.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063849.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032961.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032961.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SM99", "url": "https://www.uniprot.org/uniprotkb/F1SM99" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519490", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519490", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SM99", "url": "https://www.uniprot.org/uniprotkb/F1SM99" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1032, "end_pos": 1034, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1154, "end_pos": 1156, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1179, "end_pos": 1181, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1531, "end_pos": 1533, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1584, "end_pos": 1586, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1613, "end_pos": 1615, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1690, "end_pos": 1692, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1738, "end_pos": 1740, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1864, "end_pos": 1866, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1938, "end_pos": 1940, "annotation": "n_glycosylation_sequon" }, { "start_pos": 389, "end_pos": 391, "annotation": "n_glycosylation_sequon" }, { "start_pos": 501, "end_pos": 503, "annotation": "n_glycosylation_sequon" }, { "start_pos": 886, "end_pos": 888, "annotation": "n_glycosylation_sequon" }, { "start_pos": 965, "end_pos": 967, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1032, "end_pos": 1034 }, { "start_pos": 1154, "end_pos": 1156 }, { "start_pos": 1179, "end_pos": 1181 }, { "start_pos": 1531, "end_pos": 1533 }, { "start_pos": 1584, "end_pos": 1586 }, { "start_pos": 1613, "end_pos": 1615 }, { "start_pos": 1690, "end_pos": 1692 }, { "start_pos": 1738, "end_pos": 1740 }, { "start_pos": 1864, "end_pos": 1866 }, { "start_pos": 1938, "end_pos": 1940 }, { "start_pos": 389, "end_pos": 391 }, { "start_pos": 501, "end_pos": 503 }, { "start_pos": 886, "end_pos": 888 }, { "start_pos": 965, "end_pos": 967 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], 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"synonym", "evidence": [ { "id": "XP_003129889", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129889" } ] } ], "protein_names": [ { "name": "Chromosome 9 C11orf52 homolog", "type": "synonym", "evidence": [ { "id": "F1SMA8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMA8/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C11orf52 homolog", "type": "synonym", "evidence": [ { "id": "XP_003129889", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129889" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMA8", "url": "https://www.uniprot.org/uniprotkb/F1SMA8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C9H11orf52", "url": "https://www.uniprot.org/uniprotkb/F1SMA8", "locus": {} } ], "crossref": [ { "id": "F1SMA8", "url": "https://alphafold.ebi.ac.uk/entry/F1SMA8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000015035", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015035", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100515398", "url": "https://www.ncbi.nlm.nih.gov/gene/100515398", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR028106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100515398", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515398", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WKCPSPF", "url": "https://omabrowser.org/oma/group/WKCPSPF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SMA8", "url": "https://www.orthodb.org/?gene=F1SMA8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR37342", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37342", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37342:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37342:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15147", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15147", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003129889", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129889", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SMA8", "url": "https://www.uniprot.org/uniprotkb/F1SMA8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMA8-1", "url": "https://www.uniprot.org/uniprotkb/F1SMA8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGNRLCCGGSWSCPSTFQRKKKMGSQARWTLKQQQQQEQQQQQQQQQQQQLRQNGLKGHDIRRRTHEQVLKQPAPQRRSQGLRLEESSLHYADIQVCSRTQPRSAQEMKHLQLENATEYAILHFPQAKPRYDSKNGTLV", "length": 139, "header": "tr|F1SMA8-1|F1SMA8_PIG Isoform 1 of Chromosome 9 C11orf52 homolog OS=Sus scrofa OX=9823 GN=C9H11orf52 PE=4 SV=3 CANONICAL=F1SMA8-1" }, "isoforms": [ { "isoform_ac": "F1SMA8-1", "url": "https://www.uniprot.org/uniprotkb/F1SMA8/entry#F1SMA8-1", "sequence": { "sequence": "MGNRLCCGGSWSCPSTFQRKKKMGSQARWTLKQQQQQEQQQQQQQQQQQQLRQNGLKGHDIRRRTHEQVLKQPAPQRRSQGLRLEESSLHYADIQVCSRTQPRSAQEMKHLQLENATEYAILHFPQAKPRYDSKNGTLV", "length": 139, "header": "tr|F1SMA8-1|F1SMA8_PIG Isoform 1 of Chromosome 9 C11orf52 homolog OS=Sus scrofa OX=9823 GN=C9H11orf52 PE=4 SV=3 CANONICAL=F1SMA8-1" }, "locus": { "chromosome": "9", "start_pos": 39654282, "end_pos": 39647897, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016400.3", "url": "https://www.ensembl.org/id/ENSSSCT00000016400.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015959.3", "url": "https://www.ensembl.org/id/ENSSSCP00000015959.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMA8", "url": "https://www.uniprot.org/uniprotkb/F1SMA8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515398", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515398", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABI0NUJ0-1", "protein_name": "Chromosome 15 C11orf52 homolog", "gene_name": "C15H11orf52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKHFYNSEISYRHKTSRNIKNPREGGVKCLLLPFFPSFHILHVWLFLPLMTVVIVVSFDHCSLYTSHLAEYFTSIFLVNFYSNAMRFKGFPGGSEVKASACNAETWVQSLGQKDPLEKGMATHSSILAWRIPWTEELGGLQFTGLQSRTRLSNFTFMRSCTSTLQRKKKIGSQARRTLRRQQQQPQHEWWRQLNDTKDHDTMGHTYEQVLRQPVSQERSRQSLRSEEGSLYYADIQLYRLPQPRSVQEVKHLQLKNATEYATLRFPQVTPRYDSKNGTLV", "length": 280 }, "evidence": [ { "id": "F1SMA8", "url": "https://omabrowser.org/oma/group/F1SMA8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q96A22-1", "protein_name": "Uncharacterized protein C11orf52", "gene_name": "C11orf52", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGNRVCCGGSWSCPSTFQKKKKTGSQTRRTLKPQPQQLQQNLPKGHETTGHTYERVLQQQGSQERSPGLMSEDSNLHYADIQVCSRPHAREVKHVHLENATEYATLRFPQATPRYDSKNGTLV", "length": 123 }, "evidence": [ { "id": "F1SMA8", "url": "https://omabrowser.org/oma/group/F1SMA8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D8L0-1", "protein_name": "Uncharacterized protein C11orf52 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGNRLCCGGTWSCPSTFQKKSKTGSHPRPTLSILKQQQLWQNGTKDYETTAPTYEQVLYPPASQKKTSNSTSEESDLHYADIHVLRQIRPHSLHTVKCLHSESATEYATLRFPQATPQYDSNNGTLV", "length": 127 }, "evidence": [ { "id": "F1SMA8", "url": "https://omabrowser.org/oma/group/F1SMA8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cell junction", "id": 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45640:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45640:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00011", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00011", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06608", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06608", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287ANY0", "url": "https://www.uniprot.org/uniprotkb/A0A287ANY0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANY0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANY0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3Y3", "url": "https://www.uniprot.org/uniprotkb/A0A287B3Y3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B3Y3-1", "url": 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"chromosome": "9", "start_pos": 39641183, "end_pos": 39631625, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048368.2", "url": "https://www.ensembl.org/id/ENSSSCT00000048368.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050830.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050830.2" } ] } }, { "isoform_ac": "A0A287B6B2-1", "url": "https://www.uniprot.org/uniprotkb/F1SMB6/entry#A0A287B6B2-1", "sequence": { "sequence": "HLLQGECFPASTSGSRKENHWSGFKRAPHWFPAGASELRLSEGKFQAFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALSHDGILNLEAPREAESGPARVIDVQQSPQPNVTAFPSQ", "length": 145, "header": "tr|A0A287B6B2-1|A0A287B6B2_PIG Computationally mapped isoform of Cilia and flagella associated protein 68 OS=Sus scrofa OX=9823 GN= PE=1 SV=2 CANONICAL=F1SMB6-1" }, "locus": { "chromosome": "9", "start_pos": 39660648, "end_pos": 39623884, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043922.3", "url": 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27805158, "end_pos": 27803439, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018373.4", "url": "https://www.ensembl.org/id/ENSSSCT00000018373.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017877.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017877.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., 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{ "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMK5-1", "uniprot_ac": "F1SMK5", "uniprot_id": "F1SMK5_PIG", "mass": { "chemical_mass": 41491.0, 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improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMK5", "url": "https://www.uniprot.org/uniprotkb/F1SMK5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524656", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524656", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9RRY5-1", "protein_name": "Transmembrane protein 229A", "gene_name": "TMEM229A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAGSDANDEGPARRGGAARRPGAPGGRGSEAAASCPEPLSTAEAPAEGAVLPAWMRLYFYGMHGVTLDVLLSAAHRFARRPDLRMLGFSSPYRCLLHSLTHLALEKVYLQQRRCPSAFVFNFLLYPSAHVGLQTLAGALLRRVGGPGGAVAPGALDLALQYVLALYHCQVFLKRFLHLRYQRRQQLRGAPLAPSGARAPATAGGRRRRPRGPRGAGGAPNQGLPDLLRFLFFGMHGFLDEIFFTFFFNLLGPGDGTSSGHTSLWSFFMYGSCSFVVEKLYFHLHYSRGWGTWKRVPFYVIFIYAWELFWGLGLRTWGACSWDYSHYPLNFMGLITLMYLPGWIFLSVYQDLLSNVLWRVQYVPSN", "length": 365 }, "evidence": [ { "id": "F1SMK5", "url": "https://omabrowser.org/oma/group/F1SMK5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "B2RXF0-1", "protein_name": "Transmembrane protein 229A", "gene_name": "TMEM229A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"MSVPGTPGEMEPAGEEERPPPTAEEEDDEEKEVAAAAPASGPARGRSDSSREDADDREEEETMVVRGGGCREQELTYELQQGYRILGEFLQEKHRGLTAPFLQPLGGVAVGEEEAAEGPRSGGRGSRALLQQPRQGMCLLKMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKLALLSRHLREKTTIAVTSRGYYGLEDEKGTACTSTRRRSTSRSLAGLTSGVFESIMVQVLRQEEQLKAKEEKRLREQERKEAEEASQKEIEEWERKLLAQAAPTCMETMWEIPAIGHFLCLAQQILNLPEIVFYELERCLLMPQCNAFLSKIMTSLLSPPHRRPTLHRRPTLPYKTWEAALRQKVQQWYTAVGQTENPDNCAEKLGLCPQFFKVLGEVNPLEEKPFHELPFYQKVWLLKGLCDFVYETQKEVQDAVLGQPIHECREVILGYDYLENAYVHFPQFCGADVRIYKQRPFQAPEFPIPPIKIQRVPRIKLEKLKCDYIGASNGEHRCIREGLPSAFRREQEIHFDPTCCPAKMNLDNHDISVEMEVKSNCEIRIRRPCEMQKVDCCKENLEKPGSPGEVTGFGEPLSPGEIRFIENQQKYGEASRVKPEPSPLKENTLKSCQIYVNGSHSDHPEINCHKVVRDILLEQSLQSHKKLKLTKMRAKKKKKKKKKLKDVLNENLQRKREGLHSLAFKSYKPEIQNKLLIIKKKAKHKKHKSGKKSVSKKAITKKRKTVPKSPSVPEFQLICTNLDELRELITKIENELKDLENSRKKSGKWYHRRQAVKELHSTLIRLLNELLPWEPKLMKAFQRNRSRLKKDYDDFRRQPDHDKFTRELWTAEEGEGDAGKESPKVEISNKSIDSIEPLDILEKDHFDSDDMKLSETDFPVARSKLLKKELPSKDVPKTLPKTLKRQSKQISYLDDSTKELSPRKKAKLSTNETIVENVEGDMQIDSLNQSKHTEPLFPESLASLDSTPVSTLQKGTKPIQALLAKNIGNKVTLTNQLPPSTGRSAPAMEKPVISPPEASPIKPALTCHTSTKGPLQMVYKMPCGQWLPIDLHNSSVKIQMQPVLDPKTGEKMMQQVLILPKNFVIQHKEGKAIAKEIPPLQQKGTEQHVSSFPQTANVNSSLTSILISAAGTTQLPNTVFNNTISPLMNVSSSRPQPLSPVTSTSNLLTPPVKTSQSEAGKGKNTISAATFSQPIASPTISSTIQSQLSVTTLSGSTNSSSSLNSFAQQTADSSEAKQELKTVCIRDSQSILVRTRGGNTGVVKVQTNPDQNSPSSLSSSSVFTFAPQLQAFLVPKSTTSSSSAFSPVSATTTTSSLPPFGQTPTSVSIPTGFNTSAGKNLKLALSQPSCSGNLGHMIDKTSLMPSSPLKSSVSSSTLQPSTVNFGQTNANVTYTPAKQQQVDYFTKSHPVTRSEATAGTNGDLISGTPVQKLMLVSAPSVLSGSGTTVNVTLAPTSTGVSAQKLVFINTAIPSGTSTPTIVAEPLKQTLGPPLNKTYVKTSEQPQIVLIPSTVGTPIKINSSPTVSQIKDVKIGLNIGQAIVNTSGSVPAIPSINILQNVTPKGEEKSTKGYVLPFSTSGNSIPVSSNFVSQNITPVNESVVSAARTVNMFSVTGANVSLGSLSVTSTSASVGTRPPVLVSGNDTSSRIMPILSNKLCTSNLGNTVAISTVKTGHLASSVLISTTQPTVSPKCLTSALQIPVTVALPTPVTVSPKIINTVPQVATVPGATRSVSLSKRQSRTSVQVQFQSPGVSTTVPTNINTNKPQTDFPSLSPNPGKIMNISSFASLPNQQMSPAFVKSTPSYNSAPCGPAIPTATAPSNVTNVVGGQFGEPCIQQKIVINTSTPLAPGTQIMINGTRFIVPPQGLGAGSHVLLISTNPKYGTPLVLNSGQGMQPIPVDNQVQKITLASNNSLSGQPIKHSLRSSTKIVNSLGNTGSLPTVHAVPQIINPTSKVSVPPPAPAVSLTSVIKSPPATLLAKTSLVSAICSSNPPLPSSTSVFHLDTSVKKLLVSPEGAILNTINTPASKVSSLSSSLSQIVVSANRNPASVFPAFRSPGLEKPDTAAS", "length": 2097, "header": "tr|F1SMM2-1|F1SMM2_PIG Isoform 1 of Bromodomain containing 10 OS=Sus scrofa OX=9823 GN=BRD10 PE=4 SV=3 CANONICAL=F1SMM2-1" }, "isoforms": [ { "isoform_ac": "F1SMM2-1", "url": "https://www.uniprot.org/uniprotkb/F1SMM2/entry#F1SMM2-1", "sequence": { "sequence": "MSVPGTPGEMEPAGEEERPPPTAEEEDDEEKEVAAAAPASGPARGRSDSSREDADDREEEETMVVRGGGCREQELTYELQQGYRILGEFLQEKHRGLTAPFLQPLGGVAVGEEEAAEGPRSGGRGSRALLQQPRQGMCLLKMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKLALLSRHLREKTTIAVTSRGYYGLEDEKGTACTSTRRRSTSRSLAGLTSGVFESIMVQVLRQEEQLKAKEEKRLREQERKEAEEASQKEIEEWERKLLAQAAPTCMETMWEIPAIGHFLCLAQQILNLPEIVFYELERCLLMPQCNAFLSKIMTSLLSPPHRRPTLHRRPTLPYKTWEAALRQKVQQWYTAVGQTENPDNCAEKLGLCPQFFKVLGEVNPLEEKPFHELPFYQKVWLLKGLCDFVYETQKEVQDAVLGQPIHECREVILGYDYLENAYVHFPQFCGADVRIYKQRPFQAPEFPIPPIKIQRVPRIKLEKLKCDYIGASNGEHRCIREGLPSAFRREQEIHFDPTCCPAKMNLDNHDISVEMEVKSNCEIRIRRPCEMQKVDCCKENLEKPGSPGEVTGFGEPLSPGEIRFIENQQKYGEASRVKPEPSPLKENTLKSCQIYVNGSHSDHPEINCHKVVRDILLEQSLQSHKKLKLTKMRAKKKKKKKKKLKDVLNENLQRKREGLHSLAFKSYKPEIQNKLLIIKKKAKHKKHKSGKKSVSKKAITKKRKTVPKSPSVPEFQLICTNLDELRELITKIENELKDLENSRKKSGKWYHRRQAVKELHSTLIRLLNELLPWEPKLMKAFQRNRSRLKKDYDDFRRQPDHDKFTRELWTAEEGEGDAGKESPKVEISNKSIDSIEPLDILEKDHFDSDDMKLSETDFPVARSKLLKKELPSKDVPKTLPKTLKRQSKQISYLDDSTKELSPRKKAKLSTNETIVENVEGDMQIDSLNQSKHTEPLFPESLASLDSTPVSTLQKGTKPIQALLAKNIGNKVTLTNQLPPSTGRSAPAMEKPVISPPEASPIKPALTCHTSTKGPLQMVYKMPCGQWLPIDLHNSSVKIQMQPVLDPKTGEKMMQQVLILPKNFVIQHKEGKAIAKEIPPLQQKGTEQHVSSFPQTANVNSSLTSILISAAGTTQLPNTVFNNTISPLMNVSSSRPQPLSPVTSTSNLLTPPVKTSQSEAGKGKNTISAATFSQPIASPTISSTIQSQLSVTTLSGSTNSSSSLNSFAQQTADSSEAKQELKTVCIRDSQSILVRTRGGNTGVVKVQTNPDQNSPSSLSSSSVFTFAPQLQAFLVPKSTTSSSSAFSPVSATTTTSSLPPFGQTPTSVSIPTGFNTSAGKNLKLALSQPSCSGNLGHMIDKTSLMPSSPLKSSVSSSTLQPSTVNFGQTNANVTYTPAKQQQVDYFTKSHPVTRSEATAGTNGDLISGTPVQKLMLVSAPSVLSGSGTTVNVTLAPTSTGVSAQKLVFINTAIPSGTSTPTIVAEPLKQTLGPPLNKTYVKTSEQPQIVLIPSTVGTPIKINSSPTVSQIKDVKIGLNIGQAIVNTSGSVPAIPSINILQNVTPKGEEKSTKGYVLPFSTSGNSIPVSSNFVSQNITPVNESVVSAARTVNMFSVTGANVSLGSLSVTSTSASVGTRPPVLVSGNDTSSRIMPILSNKLCTSNLGNTVAISTVKTGHLASSVLISTTQPTVSPKCLTSALQIPVTVALPTPVTVSPKIINTVPQVATVPGATRSVSLSKRQSRTSVQVQFQSPGVSTTVPTNINTNKPQTDFPSLSPNPGKIMNISSFASLPNQQMSPAFVKSTPSYNSAPCGPAIPTATAPSNVTNVVGGQFGEPCIQQKIVINTSTPLAPGTQIMINGTRFIVPPQGLGAGSHVLLISTNPKYGTPLVLNSGQGMQPIPVDNQVQKITLASNNSLSGQPIKHSLRSSTKIVNSLGNTGSLPTVHAVPQIINPTSKVSVPPPAPAVSLTSVIKSPPATLLAKTSLVSAICSSNPPLPSSTSVFHLDTSVKKLLVSPEGAILNTINTPASKVSSLSSSLSQIVVSANRNPASVFPAFRSPGLEKPDTAAS", "length": 2097, "header": "tr|F1SMM2-1|F1SMM2_PIG Isoform 1 of Bromodomain containing 10 OS=Sus scrofa OX=9823 GN=BRD10 PE=4 SV=3 CANONICAL=F1SMM2-1" }, "locus": { "chromosome": "1", "start_pos": 216225501, "end_pos": 216115981, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005737.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005737.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005595.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005595.3" } ] } }, { "isoform_ac": "I3LH63-1", "url": "https://www.uniprot.org/uniprotkb/F1SMM2/entry#I3LH63-1", "sequence": { "sequence": "MSVPGTPGEMEPAGEEERPPPTAEEEDDEEKEVAAAAPASGPARGRSDSSREDADDREEEETMVVRGGGCREQELTYELQQGYRILGEFLQEKHRGLTAPFLQPLGGVAVGEEEAAEGPRSGGRGSRALLQQPRQGMCLLKMEEKFASGQYGGITEFVADFRLMLETCYRLHGVDHWISKQGQKLEMMLEQKLALLSRHLREKTTIAVTSRGYYGLEDEKGTACTSTRRRSTSRSLAGLTSGVFESIMVQVLRQEEQLKAKEEKRLREQERKEAEEASQKEIEEWERKLLAQAAPTCMETMWEIPAIGHFLCLAQQILNLPEIVFYELERCLLMPQCNAFLSKIMTSLLSPPHRRPTLHRRPTLPYKTWEAALRQKVQQWYTAVGQTENPDNCAEKLGLCPQFFKVLGEVNPLEEKPFHELPFYQKVWLLKGLCDFVYETQKEVQDAVLGQPIHECREVILGYDYLENAYVHFPQFCGADVRIYKQRPFQAPEFPIPPIKIQRVPRIKLEKLKCDYIGASNGEHRCIREGLPSAFRREQEIHFDPTCCPAKMNLDNHDISVEMEVKSNCEIRIRRPCEMQKVDCCKENLEKPGSPGEVTGFGEPLSPGEIRFIENQQKYGEASRVKPEPSPLKENTLKSCQIYVNGSHSDHPEINCHKVVRDILLEQSLQSHKKLKLTKMRAKKKKKKKKKLKDVLNENLQRKREGLHSLAFKSYKPEIQNKLLIIKKKAKHKKHKSGKKSVSKKAITKKRKTVPKSPSVPEFQGKWYHRRQAVKELHSTLIRLLNELLPWEPKLMKAFQRNRSRLKKDYDDFRRQPDHDKFTRELWTAEEGEGDAGKESPKVEISNKSIDSIEPLDILEKDHFDSDDMKLSETDFPVARSKLLKKELPSKDVPKTLPKTLKRQSKQISYLDDSTKELSPRKKAKLSTNETIVENVEGDMQIDSLNQSKHTEPLFPESLASLDSTPVSTLQKGTKPIQALLAKNIGNKVTLTNQLPPSTGRSAPAMEKPVISPPEASPIKPALTCHTSTKGPLQMVYKMPCGQWLPIDLHNSSVKIQMQPVLDPKTGEKMMQQVLILPKNFVIQHKEGKAIAKEIPPLQQKGTEQHVSSFPQTANVNSSLTSILISAAGTTQLPNTVFNNTISPLMNVSSSRPQPLSPVTSTSNLLTPPVKTSQSEAGKGKNTISAATFSQPIASPTISSTIQSQLSVTTLSGSTNSSSSLNSFAQQTADSSEAKQELKTVCIRDSQSILVRTRGGNTGVVKVQTNPDQNSPSSLSSSSVFTFAPQLQAFLVPKSTTSSSSAFSPVSATTTTSSLPPFGQTPTSVSIPTGFNTSAGKNLKLALSQPSCSGNLGHMIDKTSLMPSSPLKSSVSSSTLQPSTVNFGQTNANVTYTPAKQQQVDYFTKSHPVTRSEATAGTNGDLISGTPVQKLMLVSAPSVLSGSGTTVNVTLAPTSTGVSAQKLVFINTAIPSGTSTPTIVAEPLKQTLGPPLNKTYVKTSEQPQIVLIPSTVGTPIKINSSPTVSQIKDVKIGLNIGQAIVNTSGSVPAIPSINILQNVTPKGEEKSTKGYVLPFSTSGNSIPVSSNFVSQNITPVNESVVSAARTVNMFSVTGANVSLGSLSVTSTSASVGTRPPVLVSGNDTSSRIMPILSNKLCTSNLGNTVAISTVKTGHLASSVLISTTQPTVSPKCLTSALQIPVTVALPTPVTVSPKIINTVPQVATVPGATRSVSLSKRQSRTSVQVQFQSPGVSTTVPTNINTNKPQTDFPSLSPNPGKIMNISSFASLPNQQMSPAFVKSTPSYNSAPCGPAIPTATAPSNVTNVVGGQFGEPCIQQKIVINTSTPLAPGTQIMINGTRFIVPPQGLGAGSHVLLISTNPKYGTPLVLNSGQGMQPIPVDNQVQKITLASNNSLSGQPIKHSLRSSTKIVNSLGNTGSLPTVHAVPQIINPTSKVSVPPPAPAVSLTSVIKSPPATLLAKTSLVSAICSSNPPLPSSTSVFHLDTSVKKLLVSPEGAILNTINTPASKVSSLSSSLSQIVVSANRNPASVFPAFRSPGLEKPDTAAS", "length": 2067, "header": "tr|I3LH63-1|I3LH63_PIG Computationally mapped isoform of Bromodomain containing 10 OS=Sus scrofa OX=9823 GN=BRD10 PE=4 SV=2 CANONICAL=F1SMM2-1" }, "locus": { "chromosome": "1", "start_pos": 216225501, "end_pos": 216115981, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030906.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030906.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023408.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023408.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 6, "start_aa": "Thr", "end_pos": 6, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr6", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMM2", "url": "https://www.uniprot.org/uniprotkb/F1SMM2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520352", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520352", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1081, "end_pos": 1083, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1147, "end_pos": 1149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1169, "end_pos": 1171, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1177, "end_pos": 1179, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1246, "end_pos": 1248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1362, "end_pos": 1364, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1419, "end_pos": 1421, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1478, "end_pos": 1480, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1523, "end_pos": 1525, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1549, "end_pos": 1551, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1572, "end_pos": 1574, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1588, "end_pos": 1590, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1622, "end_pos": 1624, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1627, "end_pos": 1629, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1646, "end_pos": 1648, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1672, "end_pos": 1674, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1811, "end_pos": 1813, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1851, "end_pos": 1853, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1872, "end_pos": 1874, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1886, "end_pos": 1888, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1941, "end_pos": 1943, "annotation": "n_glycosylation_sequon" }, { "start_pos": 645, "end_pos": 647, "annotation": "n_glycosylation_sequon" }, { "start_pos": 832, "end_pos": 834, "annotation": "n_glycosylation_sequon" }, { "start_pos": 877, "end_pos": 879, "annotation": "n_glycosylation_sequon" }, { "start_pos": 959, "end_pos": 961, "annotation": "n_glycosylation_sequon" }, { "start_pos": 976, "end_pos": 978, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMM2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMM2" }, { "id": "SM00297", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00297" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Bromo", "eco_id": "ECO_0000259", "start_pos": 75, "end_pos": 198, "start_aa": "Leu", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 6 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1081, "end_pos": 1083 }, { "start_pos": 1147, "end_pos": 1149 }, { "start_pos": 1169, "end_pos": 1171 }, { "start_pos": 1177, "end_pos": 1179 }, { "start_pos": 1246, "end_pos": 1248 }, { "start_pos": 1362, "end_pos": 1364 }, { "start_pos": 1419, "end_pos": 1421 }, { "start_pos": 1478, "end_pos": 1480 }, { "start_pos": 1523, "end_pos": 1525 }, { "start_pos": 1549, "end_pos": 1551 }, { "start_pos": 1572, "end_pos": 1574 }, { "start_pos": 1588, "end_pos": 1590 }, { "start_pos": 1622, "end_pos": 1624 }, { "start_pos": 1627, "end_pos": 1629 }, { "start_pos": 1646, "end_pos": 1648 }, { "start_pos": 1672, "end_pos": 1674 }, { "start_pos": 1811, "end_pos": 1813 }, { "start_pos": 1851, "end_pos": 1853 }, { "start_pos": 1872, "end_pos": 1874 }, { "start_pos": 1886, "end_pos": 1888 }, { "start_pos": 1941, "end_pos": 1943 }, { "start_pos": 645, "end_pos": 647 }, { "start_pos": 832, "end_pos": 834 }, { "start_pos": 877, "end_pos": 879 }, { "start_pos": 959, "end_pos": 961 }, { "start_pos": 976, "end_pos": 978 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMM3-1", "uniprot_ac": "F1SMM3", "uniprot_id": "F1SMM3_PIG", "mass": { "chemical_mass": 124724.0, "monoisotopic_mass": 124724.0 }, "refseq": { "ac": "XP_020919591", "name": "ran-binding protein 6 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919591" }, "gene_names": [ { "name": "RANBP6", "type": "recommended", "evidence": [ { "id": "F1SMM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMM3" } ] }, { "name": "RANBP6", "type": "synonym", "evidence": [ { "id": "XP_020919591", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919591" } ] } ], "protein_names": [ { "name": "Ran-binding protein 6", "type": "recommended", "evidence": [ { "id": "F1SMM3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMM3/entry#names_and_taxonomy" } ] }, { "name": "ran-binding protein 6 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020919591", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919591" } ] } ], "function": [ { "annotation": "May function in nuclear protein import as nuclear transport receptor.", "evidence": [ { "database": "UniProtKB", "id": "F1SMM3", "url": "https://www.uniprot.org/uniprotkb/F1SMM3#function" }, { "database": "UniProtKB", "id": "ARBA00057287", "url": "https://www.uniprot.org/uniprotkb/ARBA00057287#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMM3", "url": "https://www.uniprot.org/uniprotkb/F1SMM3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RANBP6", "url": "https://www.uniprot.org/uniprotkb/F1SMM3", "locus": { "chromosome": "1", "start_pos": 216112209, "end_pos": 215807795, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005204", "url": "https://www.ensembl.org/id/ENSSSCG00000005204" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005204", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005204", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518819", "url": "https://www.ncbi.nlm.nih.gov/gene/100518819", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000357", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000357", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040122", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040122", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041389", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041389", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041653", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041653", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057672", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057672", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NDSCYQD", "url": "https://omabrowser.org/oma/group/NDSCYQD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2R634", "url": "https://www.orthodb.org/?gene=A0A5G2R634", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SMM3", "url": "https://www.orthodb.org/?gene=F1SMM3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10527", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10527", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02985", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02985", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13513", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13513", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18808", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18808", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18829", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18829", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25780", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25780", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020919591", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020919591", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R634", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R634", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R634-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R634-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMM3", "url": "https://www.uniprot.org/uniprotkb/F1SMM3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMM3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMM3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASGSAGVPAAVSGKQEFYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGFEVRQMAAALLRRLLSSGFEEVYPNLPSDVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIHSKNVVLWEVALHVFWHFPGIFGNQERHDLDIIKRLLDQCIQDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAIPHILAMMVDLQDDEDWVNADEMEEDDFDSNAVAAESALDRLACGLGGKLVLPMTKEHIMQMLQSPDWKYRHAGLMALSAIGEGCHQQMESILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPNFQKKFHETVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYLDSMVRNLHSILVIKLQELIRNGTKLALEQLVTTIASVADTIEEKFVPYYDIFMPSLKHIVELAVQKELKLLKGKTIECISHVGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMIPAWARMCKILGNDFQQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSGLEAKATACQMLVYYAKELREGFVGYTEQVVKLMVPLLKFYFHDNVRVAAAESMPFLLECARIRGPEYLSQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLNDEHLEELGEILKAKLEGHFKNQELRQVKRREENYDQQVEMSLQDEDECDVYILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSNRPWPDRQWGLCIFDDIIEHCSPTSFKYVEHFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAVGKILRFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVLGPNNSNLPKIISIIAEGKINETINYEEPCAKRLANVVRQVQTSEELWLECISQLDNEQQEALEELLNFA", "length": 1105, "header": "tr|F1SMM3-1|F1SMM3_PIG Isoform 1 of Ran-binding protein 6 OS=Sus scrofa OX=9823 GN=RANBP6 PE=1 SV=1 CANONICAL=F1SMM3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R634-1", "url": "https://www.uniprot.org/uniprotkb/F1SMM3/entry#A0A5G2R634-1", "sequence": { "sequence": "MAASGSAGVPAAVSGKQEFYQLLKNLINPSCMVRRQAEEIYENIPGSSSKGEGCSLYYTWTDGYRFCT", "length": 68, "header": "tr|A0A5G2R634-1|A0A5G2R634_PIG Computationally mapped isoform of RAN binding protein 6 OS=Sus scrofa OX=9823 GN=RANBP6 PE=4 SV=1 CANONICAL=F1SMM3-1" }, "locus": { "chromosome": "1", "start_pos": 216108920, "end_pos": 216107602, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101268.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101268.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076920.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076920.1" } ] } }, { "isoform_ac": "F1SMM3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMM3/entry#F1SMM3-1", "sequence": { "sequence": "MAASGSAGVPAAVSGKQEFYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGFEVRQMAAALLRRLLSSGFEEVYPNLPSDVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIHSKNVVLWEVALHVFWHFPGIFGNQERHDLDIIKRLLDQCIQDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAIPHILAMMVDLQDDEDWVNADEMEEDDFDSNAVAAESALDRLACGLGGKLVLPMTKEHIMQMLQSPDWKYRHAGLMALSAIGEGCHQQMESILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPNFQKKFHETVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYLDSMVRNLHSILVIKLQELIRNGTKLALEQLVTTIASVADTIEEKFVPYYDIFMPSLKHIVELAVQKELKLLKGKTIECISHVGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMIPAWARMCKILGNDFQQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSGLEAKATACQMLVYYAKELREGFVGYTEQVVKLMVPLLKFYFHDNVRVAAAESMPFLLECARIRGPEYLSQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLNDEHLEELGEILKAKLEGHFKNQELRQVKRREENYDQQVEMSLQDEDECDVYILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSNRPWPDRQWGLCIFDDIIEHCSPTSFKYVEHFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAVGKILRFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVLGPNNSNLPKIISIIAEGKINETINYEEPCAKRLANVVRQVQTSEELWLECISQLDNEQQEALEELLNFA", "length": 1105, "header": "tr|F1SMM3-1|F1SMM3_PIG Isoform 1 of Ran-binding protein 6 OS=Sus scrofa OX=9823 GN=RANBP6 PE=1 SV=1 CANONICAL=F1SMM3-1" }, "locus": { "chromosome": "1", "start_pos": 216110916, "end_pos": 216107602, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005736.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005736.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005594.1", "url": "https://www.ensembl.org/id/ENSSSCP00000005594.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMM3", "url": "https://www.uniprot.org/uniprotkb/F1SMM3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D4A634-1", "protein_name": "Ran-binding protein 6", "gene_name": "Ranbp6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAGSAGLPATISDKQEFYQLLKNLINPSCMVRRQAEEVYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPSEVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDENGTNHWPEGLKFLIDSIHSKNVVLWEVALHVFWHFPGIFGNQDRHDLDIIKRLLDQCIQDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDDDWVNADEMEEDDFDSNAVAAESALDRLACGLGGKVVLPMTKEHIMQMLQSHDWKCRHAGLMALSAIGEGCHQQMEPILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPSFQKKFHEIVITALLRTMENQGNQRVQSQAASALVIFIEDCPKSLLILYLENMVKSLQSILVIKLQELIRNGTKLALEQLVTTIASVADVIEENFIPYYDIFMPSLKHVVELAVQKELKLLRGKTIECISHVGLAVGKEKFMQDASNVMQILLKTQSDLNNMEEDDPQTSYMVSAWARMCKILGKDFEQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDEGWQFVNLGDQQSFGIKTSGLEAKATACQMLVYYAKELREGFVEYTEQVVKMMVPLLKFYFHDNVRMAAAEAMPFLLECARIRGSEYLSQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLNDEHLEELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDEDECDVYILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKIMKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLNFLCDLIESNHPVVIGPNNSNLPKIISIIAEGKINETISLEDPCAKRLANVVRQIQTSEELWLECTSQLDDEQQEALQELLSSA", "length": 1105 }, "evidence": [ { "id": "F1SMM3", "url": "https://omabrowser.org/oma/group/F1SMM3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O60518-1", "protein_name": "Ran-binding protein 6", "gene_name": "RANBP6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAATASAGVPATVSEKQEFYQLLKNLINPSCMVRRQAEEIYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPADVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDEDGTNHWPEGLKFLIDSIYSKNVVLWEVALHVFWHFPGIFGTQERHDLDIIKRLLDQCIQDQEHPAIRTLSARAAAAFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDEDWVNADEMEEDDFDSNAVAAESALDRLACGLGGKVVLPMTKEHIMQMLQSPDWKYRHAGLMALSAIGEGCHQQMESILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPNFQKKFHETVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYVDSMVKNLHSVLVIKLQELIRNGTKLALEQLVTTIASVADTIEEKFVPYYDIFMPSLKHIVELAVQKELKLLRGKTIECISHIGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMVSAWARMCKILGKDFQQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSGLEAKATACQMLVYYAKELREGFVEYTEQVVKLMVPLLKFYFHDNVRVAAAESMPFLLECARIRGPEYLAQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLNDEHLEELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDEDECDVYILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPKIISIIAEGKINETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLNFA", "length": 1105 }, "evidence": [ { "id": "F1SMM3", "url": "https://omabrowser.org/oma/group/F1SMM3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BIV3-1", "protein_name": "Ran-binding protein 6", "gene_name": "Ranbp6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGSAGLPATVSEKQEFYQLLKNLINPSCMVRRQAEEVYENIPGLCKTTFLLDAVRNRRAGYEVRQMAAALLRRLLSSGFEEVYPNLPPEVQRDVKIELILAVKLETHASMRKKLCDIFAVLARNLIDESGTNHWPEGLKFLIDSIHSKNVVLWEVALHVFWHFPGIFGNQDRHDLDIIKRLLDQCIQDQEHPAIRTLSARAAATFVLANENNIALFKDFADLLPGILQAVNDSCYQDDDSVLESLVEIADTVPKYLGPYLEDTLQLSLKLCGDSRLSNLQRQLALEVIVTLSETATPMLKKHTNIIAQAVPHILAMMVDLQDDDDWVNADEMEEDDFDSNAVAAESALDRLACGLGGKVVLPMTKEHIMQMLQSPDWKCRHAGLMALSAIGEGCHQQMEPILDETVNSVLLFLQDPHPRVRAAACTTLGQMATDFAPSFQKKFHEIVITALLRTMENQGNQRVQSHAASALVIFIEDCPKSLLILYLENMVKSLHSILVIKLQELIRNGTKLALEQLVTTIASVADAIEESFIPYYDIFMPSLKHVVELAVQKELKLLRGKTIECISHVGLAVGKEKFMQDASNVMQLLLKTQSDLNNMEDDDPQTSYMVSAWARMCKILGKDFEQYLPLVIEPLIKTASAKPDVALLDTQDVENMSDDDGWQFVNLGDQQSFGIKTSGLEAKATACQMLVYYAKELREGFVEYTEQVVKMMVPLLKFYFHDNVRVAAAEAMPFLLECARIRGSEYLSQMWQFICDPLIKAIGTEPDTDVLSEIMNSFAKSIEVMGDGCLNDEHLEELGGILKAKLEGHFKNQELRQVKRQEENYDQQVEMSLQDEDECDVYILTKVSDILHSLFSTYKEKILPWFEQLLPLIVNLICSSRPWPDRQWGLCIFDDIIEHCSPTSFKYVEYFRWPMLLNMRDNNPEVRQAAAYGLGVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNVDEVLPHWLSWLPLHEDKEEAIQTLNFLCDLIESNHPVVIGPNNSNLPKIISIIAEGKINETISHEDPCAKRLANVVRQIQTSEELWLECTSQLDDEQQEALHELLSFA", "length": 1105 }, "evidence": [ { "id": "F1SMM3", "url": "https://omabrowser.org/oma/group/F1SMM3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SMM3", "url": "https://www.uniprot.org/uniprotkb/F1SMM3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SMM3", "url": "https://www.uniprot.org/uniprotkb/F1SMM3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "nuclear localization sequence binding", "id": "GO:0008139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008139", "evidence": [ { "database": "UniProtKB", "id": "F1SMM3", "url": 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"Protein Classification", "Other" ] }, { "id": "F1SMM9", "url": "https://www.uniprot.org/uniprotkb/F1SMM9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMM9-1", "url": "https://www.uniprot.org/uniprotkb/F1SMM9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSVPQRKTWNKSKKTVKVTRSYPTFPSLNAWEEFRGLFPVDGEPNPGVGLGVEEGLLCQMVHSPEFSLFPESVMFESNFVQVKKGRSWVDIYKASNTMALGVTSSVPCLPLPNILLMASVKWHQGQSQTWNRPSAAPKIILKRILPLKFVELQVCDRLQRVLRLRTVMEKIYYLRLHPDHPETVFHFWIRLVQILQNGLSITTKDPRILVTHCLVPKNSCSPSGDAKLVQKKPQASQPSESLMQLMAKGESEALSQIFADLHQHNQFSSRSSKKTENKKHSSEKNSPSEDSIPCTRDLSWRDSFTYGEWERENPSGPQPLSLLSTLAASTGPQLSPIIGSSI", "length": 343, "header": "tr|F1SMM9-1|F1SMM9_PIG Isoform 1 of Golgi associated RAB2 interactor 1B OS=Sus scrofa OX=9823 GN=GARIN1B PE=3 SV=3 CANONICAL=F1SMM9-1" }, "isoforms": [ { "isoform_ac": "F1SMM9-1", "url": "https://www.uniprot.org/uniprotkb/F1SMM9/entry#F1SMM9-1", "sequence": { "sequence": "MSSVPQRKTWNKSKKTVKVTRSYPTFPSLNAWEEFRGLFPVDGEPNPGVGLGVEEGLLCQMVHSPEFSLFPESVMFESNFVQVKKGRSWVDIYKASNTMALGVTSSVPCLPLPNILLMASVKWHQGQSQTWNRPSAAPKIILKRILPLKFVELQVCDRLQRVLRLRTVMEKIYYLRLHPDHPETVFHFWIRLVQILQNGLSITTKDPRILVTHCLVPKNSCSPSGDAKLVQKKPQASQPSESLMQLMAKGESEALSQIFADLHQHNQFSSRSSKKTENKKHSSEKNSPSEDSIPCTRDLSWRDSFTYGEWERENPSGPQPLSLLSTLAASTGPQLSPIIGSSI", "length": 343, "header": "tr|F1SMM9-1|F1SMM9_PIG Isoform 1 of Golgi associated RAB2 interactor 1B OS=Sus scrofa OX=9823 GN=GARIN1B PE=3 SV=3 CANONICAL=F1SMM9-1" }, "locus": { "chromosome": "18", "start_pos": 19898372, "end_pos": 19882069, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018054.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018054.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017568.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017568.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMM9", "url": "https://www.uniprot.org/uniprotkb/F1SMM9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SMM9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 343, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SMM9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SMM9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMM9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMM9" }, { "id": "PF12480", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12480" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Golgi associated RAB2 interactor protein-like Rab2B-binding", "eco_id": "ECO_0000259", "start_pos": 140, "end_pos": 207, "start_aa": "Ile", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": 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"length": 1504, "header": "tr|A0A8W4F7Q3-1|A0A8W4F7Q3_PIG Computationally mapped isoform of Kielin cysteine rich BMP regulator OS=Sus scrofa OX=9823 GN=KCP PE=4 SV=1 CANONICAL=F1SMP8-1" }, "locus": { "chromosome": "18", "start_pos": 19741489, "end_pos": 19711165, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098931.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098931.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075311.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075311.1" } ] } }, { "isoform_ac": "F1SMN7-1", "url": "https://www.uniprot.org/uniprotkb/F1SMP8/entry#F1SMN7-1", "sequence": { "sequence": "MAGATAALLPLVLQLMGLALAPGMGRGSVVPRETPGPQALAYSSAPARAPQELWRPLEERLGRLEAEVTQLREQNQVLQGRVRQLESCECHPASPQCWGLGRAWPEGARWEPDACTACVCQDGAARCDPKPGLPRCHGCSHNGQTYGNGETFSTDACTTCRCLEGAVTCSQKPCPRGPCLEPGACCPHCEPGCEYEGQLYEEGANFPSSSNPCLQCSCLTSLVRCVPMKCPPVPCPEPVLRPGHCCPTCQGCTEGGSHQEHGQEWTTPGDPCRICQCLEGHIRCRQHECASLCPYPARPLPGTCCPVCDGCFLNGQEYRSGEPVGSGDPCSHCRCANGSVQCEPLPCPATPCRYPGRIPGKCCPVCDGCEYQGHQYQSQETFRLQESGRCVHCTCQAGEVSCEERECPVAPCALPDSGPQLCPACVLDGEEFAEGVQWEPDGQPCMACSCQAGVPMCRALLCSPAPCQHPTRPLGACCPSCESCTYHGQVYANGQNFTDADSPCHACRCEDGTVTCSLVNCPPTTCARPQRGPGQCCPRCPDCVLEKQVFVDGERFSHPRDPCQECQCQEGQAHCQPRVCPTASCAHPLPGPCCQHNCNGCAFGGKEYPNGADFPHPSDPCRLCRCLSGNVQCLARRCPPLLCPEPAMLPGKCCPQCPATPSSCPRPGSKVPAHHQEHFSPPDDPCHLCLCLDGSVSCQRLPCPPVPCTHPRQGPCCPSCDGCQYQGKEFTSGERFPSPTARCHVCLCWEGSVRCEPRVCAPAQCPFPARGDCCPTCDGCEYLGESYLSSQEFPDPRESCSRCTCLGGFVTCGRRPCEPLGCSHPLTLPGHCCPTCQGCLYHGVTAAPGETLPDPLDPTCSLCTCQEGSMSCRKKPCPPALCPHPSPGPCFCPVCHSCLSHGREHQDGETFEGPPGSCERCRCQAGQVSCARLPCPPLPCPLQVTEQGSCCPRCRGCLVRGEEHPEGSSWEPPDSPCSSCMCHEGVITCARIQCVTSCAQPRQGPSDCCPRCSDCEHKGRKYEPGESFQPGADPCEVCICELQPEGPPSVRCHRRQCPSLVGCPASQLLPPGPQHCCPTCAQALSHCTEGLLGSELALPGPCYTCQCQDLTWLCIQRACPELSCPLLERHTPSGSCCPVCQECVVDVDGRRVADGESWQDPSNACITCTCRRGHVDCHLEECQALSCPHGWAKVREAGRCCERCQAPAQSCLHQGQQVASGEHWAVDACTSCSCVAGTVRCHSQRCPLLFCNPDEAPALNPGSCCPHCLPRPASCMAFGDPHYRTFDGRLLHFQGSCSYVLAKDCRGGNFSVHVTNDDRGRSGVSWTQEVAVLLGDVTVQLLQGRVVTVDGRPVALPSLREPLLYAELRGRTVILHAQSGLQVLWDGQSQVEVRVPGSYRGQVCGLCGNFNGFAQDDLRGPEGMLLSTEAAFGNSWQVPEGPGPGRPCSKGREVDPCRAAGYRARREANARCGVLKSSTFSRCHAVVPPEPFFAACVYDLCACGLGSAADTCLCDVLEAYASHCRQAGVTPAWRGPTLCVVGCPLDRGFMFDECGPPCPRTCFNQHVPLGELAAHCVRPCVPGCQCPAGLVEHEAHCIPPEACPQVLLTGDQLPSTLPSPSREPQGPP", "length": 1628, "header": "tr|F1SMN7-1|F1SMP8_PIG Computationally mapped isoform of Kielin cysteine rich BMP regulator OS=Sus scrofa OX=9823 GN=KCP PE=4 SV=5 CANONICAL=F1SMP8-1" }, "locus": { "chromosome": "18", "start_pos": 19741489, "end_pos": 19711165, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018046.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018046.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017560.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017560.5" } ] } }, { "isoform_ac": "F1SMP8-1", "url": "https://www.uniprot.org/uniprotkb/F1SMP8/entry#F1SMP8-1", "sequence": { "sequence": "MAGATAALLPLVLQLMGLALAPGMGRGSVVPRETPGPQALAYSSAPARAPQELWRPLEERLGRLEAEVTQLREQNQVLQGRVRQLESCECHPASPQCWGLGRAWPEGARWEPDACTACVCQDGAARCDPKPGLPRCHGCSHNGQTYGNGETFSTDACTTCRCLAGTVRCQGPSCSELNCLESYTPPGECCPVCRPGCEYEGQLYEEGANFPSSSNPCLQCSCLTSLVRCVPMKCPPVPCPEPVLRPGHCCPTCQGCTEGGSHQEHGQEWTTPGDPCRICQCLEGHIRCRQHECASLCPYPARPLPGTCCPVCDGCFLNGQEYRSGEPVGSGDPCSHCRCANGSVQCEPLPCPATPCRYPGRIPGKCCPVCDGCEYQGHQYQSQETFRLQESGRCVHCTCQAGEVSCEERECPVAPCALPDSGPQLCPACVLDGEEFAEGVQWEPDGQPCMACSCQAGVPMCRALLCSPAPCQHPTRPLGACCPSCESCTYHGQVYANGQNFTDADSPCHACRCEDGTVTCSLVNCPPTTCARPQRGPGQCCPRCPDCVLEKQVFVDGERFSHPRDPCQECQCQEGQAHCQPRVCPTASCAHPLPGPCCQHNCNGCAFGGKEYPNGADFPHPSDPCRLCRCLSGNVQCLARRCPPLLCPEPAMLPGKCCPQCPATPSSCPRPGSKVPAHHQEHFSPPDDPCHLCLCLDGSVSCQRLPCPPVPCTHPRQGPCCPSCDGCQYQGKEFTSGERFPSPTARCHVCLCWEGSVRCEPRVCAPAQCPFPARGDCCPTCDGCEYLGESYLSSQEFPDPRESCSRCTCLGGFVTCGRRPCEPLGCSHPLTLPGHCCPTCQGCLYHGVTAAPGETLPDPLDPTCSLCTCQEGSMSCRKKPCPPALCPHPSPGPCFCPVCHSCLSHGREHQDGETFEGPPGSCERCRCQAGQVSCARLPCPPLPCPLQVTEQGSCCPRCRGCLVRGEEHPEGSSWEPPDSPCSSCMCHEGVITCARIQCVTSCAQPRQGPSDCCPRCSDCEHKGRKYEPGESFQPGADPCEVCICELQPEGPPSVRCHRRQCPSLVGCPASQLLPPGPQHCCPTCAQALSHCTEGLLGSELALPGPCYTCQCQDLTWLCIQRACPELSCPLLERHTPSGSCCPVCQAPAQSCLHQGQQVASGEHWAVDACTSCSCVAGTVRCHSQRCPLLFCNPDEAPALNPGSCCPHCLPRPASCMAFGDPHYRTFDGRLLHFQGSCSYVLAKDCRGGNFSVHVTNDDRGRSGVSWTQEVAVLLGDVTVQLLQGRVVTVDGRPVALPSLREPLLYAELRGRTVILHAQSGLQVLWDGQSQVEVRVPGSYRGQVCGLCGNFNGFAQDDLRGPEGMLLSTEAAFGNSWQVPEGPGPGRPCSKGREVDPCRAAGYRARREANARCGVLKSSTFSRCHAVVPPEPFFAACVYDLCACGLGSAADTCLCDVLEAYASHCRQAGVTPAWRGPTLCVVGCPLDRGFMFDECGPPCPRTCFNQHVPLGELAAHCVRPCVPGCQCPAGLVEHEAHCIPPEACPQVLLTGDQLPSTLPSPSREPQGPP", "length": 1568, "header": "tr|F1SMP8-1|F1SMP8_PIG Isoform 1 of Kielin cysteine rich BMP regulator OS=Sus scrofa OX=9823 GN=KCP PE=4 SV=5 CANONICAL=F1SMP8-1" }, "locus": { "chromosome": "18", "start_pos": 19741489, "end_pos": 19711165, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018044.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018044.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017558.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017558.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1470, "start_aa": "Thr", "end_pos": 1470, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1470", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 586, "start_aa": "Thr", "end_pos": 586, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr586", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 664, "start_aa": "Thr", "end_pos": 664, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr664", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMN7", "url": "https://www.uniprot.org/uniprotkb/F1SMN7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F1SMP8", "url": "https://www.uniprot.org/uniprotkb/F1SMP8" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SMP8", "url": "https://www.uniprot.org/uniprotkb/F1SMP8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of BMP signaling pathway", "id": "GO:0030513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030513", "evidence": [ { "database": "UniProtKB", "id": "F1SMP8", "url": "https://www.uniprot.org/uniprotkb/F1SMP8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1249, "end_pos": 1251, "annotation": "n_glycosylation_sequon" }, { "start_pos": 341, "end_pos": 343, "annotation": "n_glycosylation_sequon" }, { "start_pos": 500, "end_pos": 502, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMP8" }, { "id": "PS50184", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50184" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "VWFC", "eco_id": "ECO_0000259", "start_pos": 137, "end_pos": 194, "start_aa": "His", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SMP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMP8" }, { "id": "PS51233", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51233" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "VWFD", "eco_id": "ECO_0000259", "start_pos": 1213, "end_pos": 1389, "start_aa": "Ala", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 586, 664, 1470 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1249, "end_pos": 1251 }, { "start_pos": 341, "end_pos": 343 }, { "start_pos": 500, "end_pos": 502 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"https://www.uniprot.org/uniprotkb/F1SMD1" } ] } ], "protein_names": [ { "name": "DAB2 interacting protein", "type": "synonym", "evidence": [ { "id": "F1SMD1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMD1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMD1", "url": "https://www.uniprot.org/uniprotkb/F1SMD1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DAB2IP", "url": "https://www.uniprot.org/uniprotkb/F1SMD1", "locus": { "chromosome": "1", "start_pos": 261859830, "end_pos": 261659785, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005524", "url": "https://www.ensembl.org/id/ENSSSCG00000005524" } ] } } ], "crossref": [ { "id": "F1SMD1", "url": 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Classification" ] }, { "id": "IPR008936", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008936", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021887", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021887", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039360", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039360", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057606", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057606", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10194", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10194", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10194:SF26", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10194:SF26", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00616", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00616", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12004", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12004", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25321", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25321", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2Q9F3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9F3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q9F3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9F3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UP53", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UP53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0ABB5UP53-1", "url": "https://www.uniprot.org/uniprotkb/A0ABB5UP53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMD1", "url": "https://www.uniprot.org/uniprotkb/F1SMD1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMD1-1", "url": "https://www.uniprot.org/uniprotkb/F1SMD1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"length": 1196, "header": "tr|F1SMD1-1|F1SMD1_PIG Isoform 1 of DAB2 interacting protein OS=Sus scrofa OX=9823 GN=DAB2IP PE=1 SV=4 CANONICAL=F1SMD1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q9F3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMD1/entry#A0A5G2Q9F3-1", "sequence": { "sequence": "MEPDSLLDQDDSFESPQERPGSRRSLPGSLSEKSPSMEPSAATPFRVTGFLSRRLKGSIKRTKSQPKLDRNHSFRHILPGFRSAAAAAAAASAADNERSHLMPRLKESRSHESLLSPSSAVEALALSMEEEVVIKPVHSSILGQDYCFEVTTSSGSKCFSCRSAAERDKWMENLRRAVHPNKDNSRRVEHILKLWVIEAKDLPAKKKYLCELCLDDVLYARTTGKLKTDNVFWGEHFEFHNLPPLRTVTVHLYRETDKKKKKERNSYLGLVSLPAASVAGRQFVEKWYPVVTPNPKGGKGPGPMIRIKARYQTITILPMEMYKEFAEHITNHYLGLCAALEPILSAKTKEEMASALVHILQSTGKVKDFLTDLMMSEVDRCGNEHLIFRENTLATKAIEEYLKLVGQKYLQDALGEFIKALYESDENCEVDPSKCSAADLPEHQGNLKMCCELAFCKIINSYCVFPRELKEVFASWRQECSSRGRPDISERLISASLFLRFLCPAIMSPSLFHLLQEYPDDRTARTLTLIAKVTQNLANFAKFGSKEEYMSFMNQFLEHEWTNMQRFLLEISNPETISNTAGFEGYIDLGRELSSLHSLLWEAVSQLEQSIVSKLGPLPRILRDVHTALSTPGSGQLTGTNDLASTPGSGSSSISAGLQKMVIENDLSGLIDFTRLPSPTPENKDLFFVTRSSGVQPSPARSSSYSEANEPDLQMANGGKSLSMVDLQDARALDGEAGSPAGPDALAADGQVPTAQLVAGWPARAAPVSLAGLATVRRAGQTPTTPGTSEGAPGRPQLLAPLSFQNPVYQMAAGLPLSPRGLGDSGSEGHSSLSSHSNSEELAAAAKLGSFSSATAAAAEDLGRRPGELARRQMSLTEKGGQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPRGRTPPTLLSTLQYPRPSSGTLASASPDWAGPGARLRQQSSSSKGDSPELKPRAVHKQGPSPVSPNALDRTAAWLLTMNAQLLEDEALGPDPPHRDRLRSKEELSQAEKDLAVLQDKLRISTKKLEEYETLFKCQEETTQKLVLEYQARLEEGEERLRRQQEDKDIQMKGIISRLMSVEEELKKDHAEMQAAVDSKQKIIDAQEKRIASLDANARLMSALTQLKERYSMQARNGISPTNPTKLQITENGEFRNSSNC", "length": 1168, "header": "tr|A0A5G2Q9F3-1|F1SMD1_PIG Computationally mapped isoform of DAB2 interacting protein OS=Sus scrofa OX=9823 GN=DAB2IP PE=1 SV=2 CANONICAL=F1SMD1-1" }, "locus": { "chromosome": "1", "start_pos": 261857021, "end_pos": 261659886, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090283.3", "url": "https://www.ensembl.org/id/ENSSSCT00000090283.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060572.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060572.2" } ] } }, { "isoform_ac": "A0ABB5UP53-1", "url": "https://www.uniprot.org/uniprotkb/F1SMD1/entry#A0ABB5UP53-1", "sequence": { "sequence": "MEPDSLLDQDDSFESPQERPGSRRSLPGSLSEKSPSMEPSAATPFRVTGFLSRRLKGSIKRTKSQPKLDRNHSFRHILPGFRSAAAAAAAASAADNERSHLMPRLKESRSHESLLSPSSAVEALALSMEEEVVIKPVHSSILGQDYCFEVTTSSGSKCFSCRSAAERDKWMENLRRAVHPNKDNSRRVEHILKLWVIEAKDLPAKKKYLCELCLDDVLYARTTGKLKTDNVFWGEHFEFHNLPPLRTVTVHLYRETDKKKKKERNSYLGLVSLPAASVAGRQFVEKWYPVVTPNPKGGKGPGPMIRIKARYQTITILPMEMYKEFAEHITNHYLGLCAALEPILSAKTKEEMASALVHILQSTGKVKDFLTDLMMSEVDRCGNEHLIFRENTLATKAIEEYLKLVGQKYLQDALGEFIKALYESDENCEVDPSKCSAADLPEHQGNLKMCCELAFCKIINSYCVFPRELKEVFASWRQECSSRGRPDISERLISASLFLRFLCPAIMSPSLFHLLQEYPDDRTARTLTLIAKVTQNLANFAKFGSKEEYMSFMNQFLEHEWTNMQRFLLEISNPETISNTAGFEGYIDLGRELSSLHSLLWEAVSQLEQSIVSKLGPLPRILRDVHTALSTPGSGQLTGTNDLASTPGSGSSSISAGLQKMVIENDLSGSSGVQPSPARSSSYSEANEPDLQMANGGKSLSMVDLQDARALDGEAGSPAGPDALAADGQVPTAQLVAGWPARAAPVSLAGLATVRRAGQTPTTPGTSEGAPGRPQLLAPLSFQNPVYQMAAGLPLSPRGLGDSGSEGHSSLSSHSNSEELAAAAKLGSFSSATAAAAEDLGRRPGELARRQMSLTEKGGQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPRGRTPPTLLSTLQYPRPSSGTLASASPDWAGPGARLRQQSSSSKGDSPELKPRAVHKQGPSPVSPNALDRTAAWLLTMNAQLLEDEALGPDPPHRDRLRSKEELSQAEKDLAVLQDKLRISTKKLEEYETLFKCQEETTQKLVLEYQARLEEGEERLRRQQEDKDIQMKGIISRLMSVEEELKKDHAEMQAAVDSKQKIIDAQEKRIASLDANARLMSALTQLKERYSMQARNGISPTNPTKLQITENGEFRNSSNC", "length": 1146, "header": "tr|A0ABB5UP53-1|A0ABB5UP53_PIG Computationally mapped isoform of DAB2 interacting protein OS=Sus scrofa OX=9823 GN=DAB2IP PE=1 SV=1 CANONICAL=F1SMD1-1" }, "locus": { "chromosome": "1", "start_pos": 261857021, "end_pos": 261659886, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000107586.1", "url": "https://www.ensembl.org/id/ENSSSCT00000107586.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081976.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081976.1" } ] } }, { "isoform_ac": "F1SMD1-1", "url": "https://www.uniprot.org/uniprotkb/F1SMD1/entry#F1SMD1-1", "sequence": { "sequence": "MSAGGSARKSTGRPSYYYRLLRRPRLQRQRSRSRSRTRPARESPQERPGSRRSLPGSLSEKSPSMEPSAATPFRVTGFLSRRLKGSIKRTKSQPKLDRNHSFRHILPGFRSAAAAAAAASAADNERSHLMPRLKESRSHESLLSPSSAVEALALSMEEEVVIKPVHSSILGQDYCFEVTTSSGSKCFSCRSAAERDKWMENLRRAVHPNKDNSRRVEHILKLWVIEAKDLPAKKKYLCELCLDDVLYARTTGKLKTDNVFWGEHFEFHNLPPLRTVTVHLYRETDKKKKKERNSYLGLVSLPAASVAGRQFVEKWYPVVTPNPKGGKGPGPMIRIKARYQTITILPMEMYKEFAEHITNHYLGLCAALEPILSAKTKEEMASALVHILQSTGKVKDFLTDLMMSEVDRCGNEHLIFRENTLATKAIEEYLKLVGQKYLQDALGEFIKALYESDENCEVDPSKCSAADLPEHQGNLKMCCELAFCKIINSYCVFPRELKEVFASWRQECSSRGRPDISERLISASLFLRFLCPAIMSPSLFHLLQEYPDDRTARTLTLIAKVTQNLANFAKFGSKEEYMSFMNQFLEHEWTNMQRFLLEISNPETISNTAGFEGYIDLGRELSSLHSLLWEAVSQLEQSIVSKLGPLPRILRDVHTALSTPGSGQLTGTNDLASTPGSGSSSISAGLQKMVIENDLSGLIDFTRLPSPTPENKDLFFVTRSSGVQPSPARSSSYSEANEPDLQMANGGKSLSMVDLQDARALDGEAGSPAGPDALAADGQVPTAQLVAGWPARAAPVSLAGLATVRRAGQTPTTPGTSEGAPGRPQLLAPLSFQNPVYQMAAGLPLSPRGLGDSGSEGHSSLSSHSNSEELAAAAKLGSFSSATAAAAEDLGRRPGELARRQMSLTEKGGQPTVPRQNSAGPQRRIDQPPPPPPPPPPAPRGRTPPTLLSTLQYPRPSSGTLASASPDWAGPGARLRQQSSSSKGDSPELKPRAVHKQGPSPVSPNALDRTAAWLLTMNAQLLEDEALGPDPPHRDRLRSKEELSQAEKDLAVLQDKLRISTKKLEEYETLFKCQEETTQKLVLEYQARLEEGEERLRRQQEDKDIQMKGIISRLMSVEEELKKDHAEMQAAVDSKQKIIDAQEKRIASLDANARLMSALTQLKERYSMQARNGISPTNPTKLQITENGEFRNSSNC", "length": 1196, "header": "tr|F1SMD1-1|F1SMD1_PIG Isoform 1 of DAB2 interacting protein OS=Sus scrofa OX=9823 GN=DAB2IP PE=1 SV=4 CANONICAL=F1SMD1-1" }, "locus": { "chromosome": "1", "start_pos": 261857021, "end_pos": 261732429, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006075.6", "url": "https://www.ensembl.org/id/ENSSSCT00000006075.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005920.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005920.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 708, "start_aa": "Thr", "end_pos": 708, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr708", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9F3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9F3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": 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"PS50018", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50018" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ras-GAP", "eco_id": "ECO_0000259", "start_pos": 376, "end_pos": 567, "start_aa": "Thr", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 708 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1192, "end_pos": 1194 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SFK5-1", "uniprot_ac": "F1SFK5", "uniprot_id": "F1SFK5_PIG", "mass": { "chemical_mass": 101696.0, "monoisotopic_mass": 101696.0 }, "refseq": { "ac": "XP_013848582", "name": "vam6/Vps39-like protein isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013848582" }, "gene_names": [ { "name": "VPS39", "type": "recommended", "evidence": [ { "id": "F1SFK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ] }, { "name": "VPS39", "type": "synonym", "evidence": [ { "id": "XP_013848582", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013848582" } ] } ], "protein_names": [ { "name": "VPS39 subunit of HOPS complex", "type": "synonym", "evidence": [ { "id": "F1SFK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFK5/entry#names_and_taxonomy" } ] }, { "name": "vam6/Vps39-like protein isoform X3", "type": "synonym", "evidence": [ { "id": "XP_013848582", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013848582" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "VPS39", "url": "https://www.uniprot.org/uniprotkb/F1SFK5", "locus": { "chromosome": "1", "start_pos": 129198761, "end_pos": 129144344, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004731", "url": "https://www.ensembl.org/id/ENSSSCG00000004731" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004731", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004731", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513254", "url": "https://www.ncbi.nlm.nih.gov/gene/100513254", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000547", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000547", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001180", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001180", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019453", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019453", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032914", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032914", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EEYCNQV", "url": "https://omabrowser.org/oma/group/EEYCNQV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12894", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12894", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12894:SF49", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12894:SF49", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00780", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00780", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10366", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10366", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF10367", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10367", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013848582", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013848582", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8D1GYV1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1GYV1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1GYV1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1GYV1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1KT51", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KT51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1KT51-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1KT51-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SFK5-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVSADVASPESGSCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGDEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKSLAIPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGTAPVPAGEEEGELGEYRRKLLLFLEISGYYDPARLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT", "length": 886, "header": "tr|F1SFK5-1|F1SFK5_PIG Isoform 1 of VPS39 subunit of HOPS complex OS=Sus scrofa OX=9823 GN=VPS39 PE=3 SV=3 CANONICAL=F1SFK5-1" }, "isoforms": [ { "isoform_ac": "A0A8D1GYV1-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK5/entry#A0A8D1GYV1-1", "sequence": { "sequence": "MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGDEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDMKNNRIYGKNNIGADLGKPRQLYPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKSLAIPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGTAPVPAGEEEGELGEYRRKLLLFLEISGYYDPARLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT", "length": 898, "header": "tr|A0A8D1GYV1-1|A0A8D1GYV1_PIG Computationally mapped isoform of VPS39 subunit of HOPS complex OS=Sus scrofa OX=9823 GN=VPS39 PE=3 SV=1 CANONICAL=F1SFK5-1" }, "locus": { "chromosome": "1", "start_pos": 129196628, "end_pos": 129144486, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051894.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051894.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032735.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032735.2" } ] } }, { "isoform_ac": "A0A8D1KT51-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK5/entry#A0A8D1KT51-1", "sequence": { "sequence": "MLIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGDEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKSLAIPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGTAPVPAGEEEGELGEYRRKLLLFLEISGYYDPARLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT", "length": 809, "header": "tr|A0A8D1KT51-1|A0A8D1KT51_PIG Computationally mapped isoform of VPS39 subunit of HOPS complex OS=Sus scrofa OX=9823 GN=VPS39 PE=3 SV=1 CANONICAL=F1SFK5-1" }, "locus": { "chromosome": "1", "start_pos": 129196628, "end_pos": 129154150, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062609.3", "url": "https://www.ensembl.org/id/ENSSSCT00000062609.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032354.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032354.1" } ] } }, { "isoform_ac": "F1SFK5-1", "url": "https://www.uniprot.org/uniprotkb/F1SFK5/entry#F1SFK5-1", "sequence": { "sequence": "MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVSADVASPESGSCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGDEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKSLAIPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGTAPVPAGEEEGELGEYRRKLLLFLEISGYYDPARLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT", "length": 886, "header": "tr|F1SFK5-1|F1SFK5_PIG Isoform 1 of VPS39 subunit of HOPS complex OS=Sus scrofa OX=9823 GN=VPS39 PE=3 SV=3 CANONICAL=F1SFK5-1" }, "locus": { "chromosome": "1", "start_pos": 129196628, "end_pos": 129144486, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005227.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005227.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005101.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005101.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZF81-1", "protein_name": "VPS39 subunit of HOPS complex", "gene_name": "VPS39", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDIGCNRFEVTLEKSNKNFSKKIQQNSFFQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHSDNGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGAENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLAIPYLEHIIHVWEETGAHFHNCLIQLYCEKVQGLMKEYLNSFPADKSPVPAGEEGGDLGDYRKKLLLFLEKSSCYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENYCHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT", "length": 880 }, "evidence": [ { "id": "F1SFK5", "url": "https://omabrowser.org/oma/group/F1SFK5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "B0G127-1", "protein_name": "Tetratricopeptide-like helical domain-containing protein", "gene_name": "vps39", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKVDMNAFVSQNLFDKFPQRIECIEQWEYKGKKHLFIGTTEGHVLVYDVIEKENQHGNIQVSVIIRDTKLVSKKPITQMSIFDDYNKLLVLTDGDLKVYDLIQFDVTTGITLMKAKGCSTYAVSYQPGSLSLVAAVKKKLVLYGWDGSDFYELKEFNMPDIAKHIDYRGNFIIVCFKKVYNIINTQDGSVINVDADKLTFTTFLQENEFLMVKGSMSFFINTAGNPVRRHSITWQDAPSSMSIYQPFAISIEPRLVEVQILPDPNDPKTISQSLFLPACKSISAKRDIYVSSATSIWRLQPLPILDLVDQMVTKQEYETAINLLQTSKDIIPGIKERLIKIKTSAAYHLFSKEQFQAAMGYFISAQVDPLKIISLYPGLLPAHLQDKLSTPFNIRDIENNPRALPELEHYLVEFRKNKIEYSSPPELLNSGYTLQELVDTTLLKVYIKHKASLIPHFFHLKNHCHIEESERVLLEEKKLTELILFYKSKDLHRKALTLLAKSSNISPNDTISYLSQLGEKHIGIILEHSKWVLQKCPEDALKIFTVDRKDPLSPDDVIPHLKQCAPSLLRPYLEHIINDPISPNKNPEYHNQLVFEYLGSILELIKQTPNSAIVREPGLIPAGKESGELGELRTKIIQFLENSKYYLPEKMLSRFPSNDLYEERAILLSKIGRHEQALAIYAHKLKNFAMAEEYCDRHYNKDSEESRDVYLSLLNVYLKPTDANTSPLLDPALKLLNKHYRSINTPKALSLLPLNTPIDQLYPFFESVIRDNTKTKRDNQIVKNLFKSENFKIKDELSQLKTGVIKITEDLTCPICNKIFLGTQAFVARPDGTALHYHHKNDKQHQSWFE", "length": 851 }, "evidence": [ { "id": "F1SFK5", "url": "https://omabrowser.org/oma/group/F1SFK5/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "E9PT04-1", "protein_name": "VPS39 subunit of HOPS complex", "gene_name": "Vps39", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLLSRCRSWRSFHCRLTAWLPGEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDAKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIVAVLPRYVEIRTLEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPTLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKQKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSIWVLRDFPEDGLKIFTEDLPEVESLPRDRVLNFLIENFKALAIPYLEHIIHVWEETGTRFHNCLIQLYCEKVQNLMKDYLLSLPTGKSPVPAGEEAGELGESRQKLLTFLEISSSYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTKMAKEYCHKHYDQNKEGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPQANLQAALQVLELHYSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNSADT", "length": 873 }, "evidence": [ { "id": "F1SFK5", "url": "https://omabrowser.org/oma/group/F1SFK5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8L5Y0-1", "protein_name": "Vacuolar sorting protein 39", "gene_name": "VPS39", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVHNAYDSFQLLKDCPARIDAVESYGSKLFAGCYDGSLRIYSPPESSASDPSELHQETYVLEKTVAGFSKKPIVAMEVLASRELLLSLSESIAFHGLPNLETVAVITKAKGANAYSWDDRRGFLCFSRQKRVCVFKHDGGGGFVEVRDYGVPDTVKSISWCGENICLGIKKEYVILNTANGTLSEVFPSGRVAPPLVISLPSGELILGKENIGVFVDQNGKLLQTERICWSEAPTSIVIQNPYAIALLPRRVEVRLLRSPYPLIQTIVLQNIRRLVKSNNAVIVGLDNSVYVLFPVSIGAQIVQLTASGNFEEALALCKVLPPDESSLRAAKESSIHTRFAHYLFENGSYEEAMEHFLASQVDITHVLSMYPSIILPKTTIIPQPDKMVDISGDEASLSRGSSGISDDMESSSPRYFLESEDNADLESKKMSHNTLMALIKYLLKRRPAVIEKATSEGTEEVISDAVGKTYGANDSSKSKKSSKGRGMIPLNSGAREMAAILDTALLQALLHTGQSGAAIELLKGVNYSDVKICEEILMKSKNYSALLELFKSNSMHHEALKLLNQLADESKTNQSQTDVTQIFSPELIIEYLKPLCRTDPMLVLEYSMLVLESCPTQTIDLFLSGNISADLVNSYLKQHAPNMQGRYLELMMAMNDTAVSGNLQNEMVQIYLSEVLDLYAAKSAQQKWDEKDHPPERKKLLSALESISGYSPQPLLKRLPRDALYEERAVILGKMNQHELALSIYVHKLHAPDLALAYCDRIYESVTYLPSGKPSSNIYLTVLQIYLNPKKSAKDFAKRIVALGSFESSDTTKMMDSVLSSKAKGGRSKKIVAIEGAEDMRVGLSSSTDSGRSDVDTEEPLEEGDSTVMISEVLDLLSQRWERINGAQALKLLPRETKLHNLLPFLAPLLRNSSEAHRNFSVIKSLRQSENLQVKEELYKHRKGVAQVTSESMCSLCNKKIGTSVFAVYPNGKTLVHFVCFRDSQGMKAVSKTTHGRRR", "length": 1000 }, "evidence": [ { "id": "F1SFK5", "url": "https://omabrowser.org/oma/group/F1SFK5/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8R5L3-1", "protein_name": "Vam6/Vps39-like protein", "gene_name": "Vps39", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIVAVLPRYVEIRTLEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPTLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLNFLIENFKALAIPYLEHIIHVWEETGSQFHNCLIQLYCEKVQSLMKDYLLSLPTGKSPVPAGEEGGELGEYRQKLLMFLEISSHYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTKMAKEYCHKHYDQNKEGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPQANLQAALQVLELHYSKLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNSADT", "length": 886 }, "evidence": [ { "id": "F1SFK5", "url": "https://omabrowser.org/oma/group/F1SFK5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96JC1-1", "protein_name": "Vam6/Vps39-like protein", "gene_name": "VPS39", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPADVASPESGSCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEHIIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDRNKDGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHSKLDTTKALNLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT", "length": 886 }, "evidence": [ { "id": "F1SFK5", "url": "https://omabrowser.org/oma/group/F1SFK5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VEA2-1", "protein_name": "Vacuolar protein sorting-associated protein 39 homolog", "gene_name": "Vps39", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MHQAYSVHSILKQGVQIESIAAYGNHVILGTRSGQLIMYSVDEETGVDMRMFNKNFSRKPITQMEVIASENLLFVLTDLQVQVCDIRRIESNFAFMHSAPDTKGCTLFTMDVDTPKSTTGRVATVIRVCCAIRRRLVFFFWKEDKLNSLELIIELSDVPRTLCWVGHAVCVGFKDEYVVYDISGKAPKKHNLFLTSSSISRDPCICLIRNNMLGISKDSYLVVVDPSQYKESDGINNSTDVRPAAMDSNSSLTPLLWSSPLLDLVWDEPFAVGRVNNAIEVRSLVGKDTLVQTIPELQKTKFLVHADKGTIFAAATSELWCIRMVEIPIQRQQLLQQKKFQLAIELTQISDEPAADRAQTIRQIHMLYAKELFTNKEFSAAMKEFEKAAIDPYDVIRLFPNLVPEPKPGTEDVTVPTSSTPALEDSDLENAYLALIEYLAWARQREVVKLRDTKSSSKSLLEIIDTTLLKCYLQTNDSLVAPLLRLNQCHLEESEKTLKKHNKISELIILYQMKGKHKEALKLLREQASIEGSVLQGRKRTIRYLQELGGDHLPLIFEFADWVLNDNPEEGLTIFTDELIEVESLPRAKVLDFFISKHKALVIPYLEHVITEWKDGNTLLHNVLLKQYREKVQRLLAQQEKGEEVPELIPMRAKLYKMLEESNDYSPDRLLEEFPTNILLEERALILGRLKKHDNVLSIYIHVLGDVAKATAYAEAHYKEDKHIFHTLIKCILIPPTQPLYDGVPLHPDFSQVNREVALEILNTHATRIDPFEIFEHLPDDMPMPQLEKYLEKSIRKMMADKHEMQMMCGFLEAESTRLENALEEQRNISFELNESSVCSECKKRFQTQSAFVRYPNGHIVHLSCHDRLARAAAQQ", "length": 876 }, "evidence": [ { "id": "F1SFK5", "url": "https://omabrowser.org/oma/group/F1SFK5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 9, "go_terms": [ { "name": "autophagosome maturation", "id": "GO:0097352", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097352", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "vacuole fusion", "id": "GO:0097576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097576", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "endosome to lysosome transport", "id": "GO:0008333", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008333", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "endosomal vesicle fusion", "id": "GO:0034058", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034058", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "endocytic recycling", "id": "GO:0032456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032456", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "late endosome to lysosome transport", "id": "GO:1902774", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902774", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "autophagosome-lysosome fusion", "id": "GO:0061909", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061909", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "late endosome membrane", "id": "GO:0031902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031902", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "AP-3 adaptor complex", "id": "GO:0030123", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030123", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "lysosomal HOPS complex", "id": "GO:1902501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902501", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": "UniProtKB", "id": "F1SFK5", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 242, "end_pos": 244, "annotation": "n_glycosylation_sequon" }, { "start_pos": 432, "end_pos": 434, "annotation": "n_glycosylation_sequon" }, { "start_pos": 72, "end_pos": 74, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SFK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SFK5" }, { "id": "PS50219", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50219" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CNH", "eco_id": "ECO_0000259", "start_pos": 15, "end_pos": 294, "start_aa": "Pro", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 242, "end_pos": 244 }, { "start_pos": 432, "end_pos": 434 }, { "start_pos": 72, "end_pos": 74 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SCV0-1", "uniprot_ac": "F1SCV0", "uniprot_id": "F1SCV0_PIG", "mass": { "chemical_mass": 28868.0, "monoisotopic_mass": 28868.0 }, "refseq": { "ac": "XP_001926428", "name": "zinc finger protein 511 isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926428" }, "gene_names": [ { "name": "ZNF511", "type": "recommended", "evidence": [ { "id": "F1SCV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCV0" } ] }, { "name": "ZNF511", "type": "synonym", "evidence": [ { "id": "XP_001926428", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926428" } ] } ], "protein_names": [ { "name": "Zinc finger protein 511", "type": "synonym", "evidence": [ { "id": "F1SCV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCV0/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 511 isoform 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}, { "id": "PTHR21354", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21354", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21354:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21354:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_001926428", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001926428", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BDM1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDM1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BDM1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BDM1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBH9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBH9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RBH9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RBH9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCV0", "url": "https://www.uniprot.org/uniprotkb/F1SCV0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCV0-1", "url": "https://www.uniprot.org/uniprotkb/F1SCV0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQLPPALHVRLAGAAGAAEPLPVERDPAAGAAPFTFAARQVRFPREHEFFEDGDVQRHLYLQDVLTQVAGAPERPRVPEFTCHVAGCCQVFDVLEDYEHHYHTLHRNVCSFCKRAFPSGHLLDTHILEWHDSLFQILAERQDMYQCLVEGCPERFRTSRDRKEHLVTGHLYPADFRFDKPRKSKGPATPGATQVPAEALVDDGVTSQGDAMEVCSEHLEPSPEPSGEKRAYGHRVPSTICFGQGASRGFKSSKKRSKQ", "length": 258, "header": "tr|F1SCV0-1|F1SCV0_PIG Isoform 1 of Zinc finger protein 511 OS=Sus scrofa OX=9823 GN=ZNF511 PE=4 SV=1 CANONICAL=F1SCV0-1" }, "isoforms": [ { "isoform_ac": "A0A287BDM1-1", "url": "https://www.uniprot.org/uniprotkb/F1SCV0/entry#A0A287BDM1-1", "sequence": { "sequence": "MQLPPALHVRLAGAAGAAEPLPVERDPAAGAAPFTFAARQVRFPREHEFFEDGDVQRHLYLQDVLTQVAGAPERPRVPEFTCHVAGCCQVFDVLEDYEHHYHTLHRNVCSFCKRAFPSGHLLDTHILEWHDSLFQILAERQDMYQCLVEGCPERFRTSRDRKEHLVTGHLYPADFRFDKPRKSKGPATPGATQVPAEALVDDGVTSQGDAMEVCSEHLEPSPEPSGEKRAYGHRNCCWVGALASEGGESLTLAACLEPPASLAALPGVQQHQKGARSVPLPRGPEVGQRDLVCNCSGVPSTICFGQGASRGFKSSKKRSKQ", "length": 321, "header": "tr|A0A287BDM1-1|A0A287BDM1_PIG Computationally mapped isoform of Zinc finger protein 511 OS=Sus scrofa OX=9823 GN=ZNF511 PE=4 SV=2 CANONICAL=F1SCV0-1" }, "locus": { "chromosome": "14", "start_pos": 141258267, "end_pos": 141253443, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042599.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042599.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054622.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054622.2" } ] } }, { "isoform_ac": "A0A5G2RBH9-1", "url": "https://www.uniprot.org/uniprotkb/F1SCV0/entry#A0A5G2RBH9-1", "sequence": { "sequence": "MQLPPALHVRLAGAAGAAEPLPVERDPAAGAAPFTFAARQVRFPREHEFFEDGDVQRHLYLQDVLTQVAGAPERPRVPEFTCHVAGCCQVFDVLEDYEHHYHTLHRNVCSFCKRAFPSGHLLDTHILEWHDSLFQILAERQDMYQCLVEGCPERFRTSRDRKEHLVTGHLYPADFRFDKPRKSKGPATPGATQVPAEALVDDGVTSQGDAMEVCSEHLEPSPEPSGEKRAYGHRLGTWPPETTWAGTGDLRGTSTFLPLETPGRGREGRGTDQAIRTPHQRKIEDIMDENSTWSPRRGAAERSLISLHEVEGSIPGLVGLRIWRCRELQCRSQTRLGSGVAVVV", "length": 344, "header": "tr|A0A5G2RBH9-1|A0A5G2RBH9_PIG Computationally mapped isoform of Zinc finger protein 511 OS=Sus scrofa OX=9823 GN=ZNF511 PE=4 SV=1 CANONICAL=F1SCV0-1" }, "locus": { "chromosome": "14", "start_pos": 141260938, "end_pos": 141253443, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083626.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083626.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067968.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067968.1" } ] } }, { "isoform_ac": "F1SCV0-1", "url": "https://www.uniprot.org/uniprotkb/F1SCV0/entry#F1SCV0-1", "sequence": { "sequence": "MQLPPALHVRLAGAAGAAEPLPVERDPAAGAAPFTFAARQVRFPREHEFFEDGDVQRHLYLQDVLTQVAGAPERPRVPEFTCHVAGCCQVFDVLEDYEHHYHTLHRNVCSFCKRAFPSGHLLDTHILEWHDSLFQILAERQDMYQCLVEGCPERFRTSRDRKEHLVTGHLYPADFRFDKPRKSKGPATPGATQVPAEALVDDGVTSQGDAMEVCSEHLEPSPEPSGEKRAYGHRVPSTICFGQGASRGFKSSKKRSKQ", "length": 258, "header": "tr|F1SCV0-1|F1SCV0_PIG Isoform 1 of Zinc finger protein 511 OS=Sus scrofa OX=9823 GN=ZNF511 PE=4 SV=1 CANONICAL=F1SCV0-1" }, "locus": { "chromosome": "14", "start_pos": 141258267, "end_pos": 141253443, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011788.4", "url": "https://www.ensembl.org/id/ENSSSCT00000011788.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000011486.2", "url": "https://www.ensembl.org/id/ENSSSCP00000011486.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 188, "start_aa": "Thr", "end_pos": 188, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr188", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCV0", "url": "https://www.uniprot.org/uniprotkb/F1SCV0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152871", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152871", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZW74-1", "protein_name": "Zinc finger protein 511", "gene_name": "ZFP511", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLLSALRHRLRERPPLPPVPPPASAPPRPPFAFSPRRLRLGPQHPLLEDGDVQRHLYLREALTGRAEEAERPRVSEFYCHISGCSQVFDTLEGYEHHYNALHRNVCSFCRRSFPSGHLLDIHISEWHDSLFQIMAEKQNMYKCLVEGCVEKFKSSKDRKDHLVTVHLYPADFRFDRPKKAKSGAKHVSCPTDHDGSVLMDVSVETSEQLQADHMEVVPSESMEVPQPAASPSLPEKRLYKSRIPSTICFGQGATRGFKGPRKKV", "length": 264 }, "evidence": [ { "id": "F1SCV0", "url": "https://omabrowser.org/oma/group/F1SCV0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4AAR5-1", "protein_name": "Zinc finger protein 511", "gene_name": "Zfp511", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLPPALYSRLAGEPGAAEPLPVERNPAAGEAPFRYAPRPVRFPRDHEFFEDMLTQVSETPEKSMVPEFTCQVAGCCQVFAAIEDYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQILAQRQDMYQCLVESCPEKFKTSQDRKDHMVRLHLYPADFRFDKPKTNRGPAMPAAADTAARALRDDSDAMEVCLEPAAPPPCRRTYSHRIPSTVCFGQGAARGFKSTKKKNKHH", "length": 239 }, "evidence": [ { "id": "F1SCV0", "url": "https://omabrowser.org/oma/group/F1SCV0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3IAN2-1", "protein_name": "Zinc finger protein 511 isoform X1", "gene_name": "Znf511", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLLPTALYSRLAGAPGAAEPLPVERNPAAGAAPFLFTPRLVRFPRDHEFFEDGDVQRHLYLQDMLTQVSETPEKSMVPEFTCQVAGCCQVFAALEDYQHHYHMSHGNTCSLCSRAFPSGHLLDVHILEWHDSLFQILAQRQDMYQCLVEGCPEKFRTSQDRKDHMVRLHLYPADFRFDKPKTNRGPAMPAAADPPARALKDDSDAMEICSEPAAPPPCRRTYSHRIPSTVCFGQGAARGFKSTKKRNKHP", "length": 250 }, "evidence": [ { "id": "F1SCV0", "url": "https://omabrowser.org/oma/group/F1SCV0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q6P0X2-1", "protein_name": "Zinc finger protein 511", "gene_name": "Znf511", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLPPALYSRLAGEPGAAEPLPVERNPAAGEAPFRFAPRAVRFPRDHEFFEDGDVQRHLYLQDMLTQVSETPEKSMVPEFTCQVAGCCQVFAAIEDYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQILAQRQDMYQCLVESCPEKFKTSQDRKDHMVRLHLYPADFRFDKPKTNRGPAMPAAADAATRAPTDDSDAMEICSEPAAPPPCRRTYSHRSV", "length": 227 }, "evidence": [ { "id": "F1SCV0", "url": "https://omabrowser.org/oma/group/F1SCV0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7ZZ00-1", "protein_name": "Zinc finger protein 511", "gene_name": "znf511", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLQPEIIEFLASTTPQILAKNIPVTENRESKRHDIQQKAEAGEEKAVSPFEFRPQRLRFAVEDEYFEDGDINRHMYLQNIVTSFVDDKQPPTISEFRCHIAGCKQLFDTLEGYEHHYNALHRNVCSNCKRSFPSNRLLEIHILEWHDSLFQIMAEKQCMYECLVEGCGLKFKTSKERKDHLIRTHSYPADFRFDKSKKIGRTTEKKTQQKKDAHMEVSATVLQQESSESMDFSLTPEPVETEPMQAANLKPRYSYKVPSSICFGQGSVRGFRGRRKK", "length": 277 }, "evidence": [ { "id": "F1SCV0", "url": "https://omabrowser.org/oma/group/F1SCV0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8NB15-2", "protein_name": "Zinc finger protein 511", "gene_name": "ZNF511", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQLPPALCARLAAGPGAAEPLPVERDPAAGAAPFRFVARPVRFPREHQFFEDGDVQRHLYLQDVIMQVADVPEKPRVPAFACQVAGCCQVFDALDDYEHHYHTLHGNVCSFCKRAFPSGHLLDAHILEWHDSLFQILSERQDMYQCLVEGCTEKFKTSRDRKDHMVRMHLYPADFRFDKPKKSRSPASAEAPGDSGERSEGEAMEICSEPVAASPAPAGERRIYRHRIPSTICFGQGAARGFKSNKKKTKQC", "length": 252 }, "evidence": [ { "id": "F1SCV0", "url": "https://omabrowser.org/oma/group/F1SCV0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SCV0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCV0" }, { "id": "PS00028", "database": "PROSITE", "url": "https://prosite.expasy.org/PS00028" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 82, "end_pos": 105, "start_aa": "Cys", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 188 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": 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[ "Protein Classification" ] }, { "id": "IPR013761", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013761", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036390", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036390", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046328", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046328", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100510890", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510890", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MSWTELF", "url": "https://omabrowser.org/oma/group/MSWTELF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8W4F8R2", "url": "https://www.orthodb.org/?gene=A0A8W4F8R2", 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"database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLDSVTHGTFLPNANFCDPLMSWTDLFSSEEYYPAFEHQTACDPYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRSQGYSFFNDAEETKAAIKDYADSSCLKTSGIKSQDCHNHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEDKL", "length": 255, "header": "tr|F1SGT0-1|F1SGT0_PIG Isoform 1 of ETS-related transcription factor Elf-5 OS=Sus scrofa OX=9823 GN=ELF5 PE=3 SV=2 CANONICAL=F1SGT0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RGU4-1", "url": "https://www.uniprot.org/uniprotkb/F1SGT0/entry#A0A5G2RGU4-1", "sequence": { "sequence": "MTTTEDQSPAPPGGTSEQRVMLDSVTHGTFLPNANFCDPLMSWTDLFSSEEYYPAFEHQTACDPYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRSQGQHLEGWTSRGGAGIGTKGH", "length": 158, "header": "tr|A0A5G2RGU4-1|A0A5G2RGU4_PIG Computationally mapped isoform of E74 like ETS transcription factor 5 OS=Sus scrofa OX=9823 GN=ELF5 PE=3 SV=2 CANONICAL=F1SGT0-1" }, "locus": { "chromosome": "2", "start_pos": 26473804, "end_pos": 26444304, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090199.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090199.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070480.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070480.2" } ] } }, { "isoform_ac": "A0A8D0Q274-1", "url": "https://www.uniprot.org/uniprotkb/F1SGT0/entry#A0A8D0Q274-1", "sequence": { "sequence": "MLDSVTHGTFLPNANFCDPLMSWTDLFSSEEYYPAFEHQTDADSSCLKTSGIKSQDCHNHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEDKL", "length": 160, "header": "tr|A0A8D0Q274-1|A0A8D0Q274_PIG Computationally mapped isoform of E74 like ETS transcription factor 5 OS=Sus scrofa OX=9823 GN=ELF5 PE=3 SV=1 CANONICAL=F1SGT0-1" }, "locus": { "chromosome": "2", "start_pos": 26485228, "end_pos": 26464689, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040051.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040051.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059553.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059553.2" } ] } }, { "isoform_ac": "A0A8W4F8R2-1", "url": "https://www.uniprot.org/uniprotkb/F1SGT0/entry#A0A8W4F8R2-1", "sequence": { "sequence": "MTTTEDQSPAPPGGTSEQRVMLDSVTHGTFLPNANFCDPLMSWTDLFSSEEYYPAFEHQTACDPYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRSQGYSFFNDAEETKAAIKDYADSSCLKTSGIKSQDCHNHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEDKL", "length": 275, "header": "tr|A0A8W4F8R2-1|A0A8W4F8R2_PIG Computationally mapped isoform of ETS-related transcription factor Elf-5 OS=Sus scrofa OX=9823 GN=ELF5 PE=3 SV=1 CANONICAL=F1SGT0-1" }, "locus": { "chromosome": "2", "start_pos": 26485228, "end_pos": 26444304, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106781.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106781.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075210.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075210.1" } ] } }, { "isoform_ac": "F1SGT0-1", "url": "https://www.uniprot.org/uniprotkb/F1SGT0/entry#F1SGT0-1", "sequence": { "sequence": "MLDSVTHGTFLPNANFCDPLMSWTDLFSSEEYYPAFEHQTACDPYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRSQGYSFFNDAEETKAAIKDYADSSCLKTSGIKSQDCHNHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEDKL", "length": 255, "header": "tr|F1SGT0-1|F1SGT0_PIG Isoform 1 of ETS-related transcription factor Elf-5 OS=Sus scrofa OX=9823 GN=ELF5 PE=3 SV=2 CANONICAL=F1SGT0-1" }, "locus": { "chromosome": "2", "start_pos": 26485228, "end_pos": 26464689, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014527.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014527.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014134.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014134.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100510890", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510890", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MET4-1", "protein_name": "ETS-related transcription factor Elf-5", "gene_name": "Elf5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLDSVTHSTFLPNTSFCDPLMSWTDLFSNEEYYPTFEHQTACDSYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRSQGYSFFNDAEETKTTIKDYADSSCLKTSGIKSQDCHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEDKL", "length": 253 }, "evidence": [ { "id": "F1SGT0", "url": "https://omabrowser.org/oma/group/F1SGT0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I6A588-1", "protein_name": "ETS-related transcription factor Elf-5", "gene_name": "Elf5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLDSVTHSTFLPNASFCDPLMSWTDLFNNEEYYPAFEHQTAACDSYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRSQGYSFFNDAEETKTAIKDYADSSCLKTSGIKSQDCHTRTNLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEEKL", "length": 254 }, "evidence": [ { "id": "F1SGT0", "url": "https://omabrowser.org/oma/group/F1SGT0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0ZVP9-1", "protein_name": "E74 like ETS transcription factor 5", "gene_name": "ELF5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPVYLKITLLILPFHLQLMYRCLKVMLDSVTPSTFLSNTMVCDPLMSWTEIFGTTEDDYPTCDHQTDSDSFWTSIHPEHWSKHNVCEWLQFCCDQYKLDANCISFSHFNISGLQLCNMTQEEFLDAAGICGEYLYFILQNIRMHGTSFFTDLEETKLSNKDCDLLTKLPPDSGVPSSLLTLFCSSVPVRDKACMRAGGISSQECHSHGRTNLQSSHLWEFVRDLLLSPEENGGILEWEDRGQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQENKI", "length": 307 }, "evidence": [ { "id": "F1SGT0", "url": "https://omabrowser.org/oma/group/F1SGT0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q58DT0-1", "protein_name": "ETS-related transcription factor Elf-5", "gene_name": "ELF5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLDSVTHSTFLPNTSFCDPLMSWTDLFSNEEYYPAFEHQTACDSYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCGMTQEEFMEAAGVCGEYLYFILQSIRSQGYSFFNDPDETKATLKDYADSSCLKTSGIKSQDCHSHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEDKL", "length": 255 }, "evidence": [ { "id": "F1SGT0", "url": "https://omabrowser.org/oma/group/F1SGT0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8VDK3-1", "protein_name": "ETS-related transcription factor Elf-5", "gene_name": "Elf5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLDSVTHSTFLPNASFCDPLMPWTDLFSNEDYYPAFEHQTACDSYWTSVHPEYWTKRHVWEWLQFCCDQYKLDANCISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRSQGYSFFNDAEETKTGIKDYADSSCLKTSGIKSQDCHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEEKL", "length": 253 }, "evidence": [ { "id": "F1SGT0", "url": "https://omabrowser.org/oma/group/F1SGT0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UKW6-1", "protein_name": "ETS-related transcription factor Elf-5", "gene_name": "ELF5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPSLPHSHRVMLDSVTHSTFLPNASFCDPLMSWTDLFSNEEYYPAFEHQTACDSYWTSVHPEYWTKRHVWEWLQFCCDQYKLDTNCISFCNFNISGLQLCSMTQEEFVEAAGLCGEYLYFILQNIRTQGYSFFNDAEESKATIKDYADSNCLKTSGIKSQDCHSHSRTSLQSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVDRRLVYKFGKNAHGWQEDKL", "length": 265 }, "evidence": [ { "id": "F1SGT0", "url": "https://omabrowser.org/oma/group/F1SGT0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "sequence-specific double-stranded DNA binding", "id": "GO:1990837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990837", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "sequence-specific DNA binding", "id": "GO:0043565", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043565", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SGT0", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SGT0" }, { "id": "PS51433", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51433" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PNT", "eco_id": "ECO_0000259", "start_pos": 33, "end_pos": 119, "start_aa": "Tyr", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 154, "end_pos": 156 }, { "start_pos": 83, "end_pos": 85 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"F1SJ92_PIG", "mass": { "chemical_mass": 47221.0, "monoisotopic_mass": 47221.0 }, "refseq": { "ac": "XP_005656334", "name": "proline-serine-threonine phosphatase-interacting protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656334" }, "gene_names": [ { "name": "PSTPIP1", "type": "recommended", "evidence": [ { "id": "F1SJ92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ] }, { "name": "PSTPIP1", "type": "synonym", "evidence": [ { "id": "XP_005656334", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656334" } ] } ], "protein_names": [ { "name": "Proline-serine-threonine phosphatase-interacting protein 1", "type": "recommended", "evidence": [ { "id": "F1SJ92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SJ92/entry#names_and_taxonomy" } ] }, { "name": "proline-serine-threonine phosphatase-interacting protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005656334", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656334" } ] } ], "function": [ { "annotation": "Involved in regulation of the actin cytoskeleton. May regulate WAS actin-bundling activity. Bridges the interaction between ABL1 and PTPN18 leading to ABL1 dephosphorylation. May play a role as a scaffold protein between PTPN12 and WAS and allow PTPN12 to dephosphorylate WAS. Has the potential to physically couple CD2 and CD2AP to WAS. Acts downstream of CD2 and CD2AP to recruit WAS to the T-cell:APC contact site so as to promote the actin polymerization required for synapse induction during T-cell activation. Down-regulates CD2-stimulated adhesion through the coupling of PTPN12 to CD2. Also has a role in innate immunity and the inflammatory response. Recruited to inflammasomes by MEFV. Induces formation of pyroptosomes, large supramolecular structures composed of oligomerized PYCARD dimers which form prior to inflammatory apoptosis. Binding to MEFV allows MEFV to bind to PYCARD and facilitates pyroptosome formation. Regulates endocytosis and cell migration in neutrophils.", "evidence": [ { "database": "UniProtKB", "id": "A0A8D1F6U9", "url": "https://www.uniprot.org/uniprotkb/A0A8D1F6U9#function" }, { "database": "UniProtKB", "id": "ARBA00057396", "url": "https://www.uniprot.org/uniprotkb/ARBA00057396#function" }, { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PSTPIP1", "url": "https://www.uniprot.org/uniprotkb/F1SJ92", "locus": { "chromosome": "7", "start_pos": 57146751, "end_pos": 57102757, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001867", "url": "https://www.ensembl.org/id/ENSSSCG00000001867" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001867", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001867", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07671", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07671", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd11824", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11824", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100152628", "url": "https://www.ncbi.nlm.nih.gov/gene/100152628", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027267", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027267", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030777", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030777", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR031160", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031160", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "F1SJ92", "url": "https://www.orthodb.org/?gene=F1SJ92", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23065", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23065", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23065:SF51", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23065:SF51", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00018", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00018", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00611", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00611", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005656334", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005656334", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8D1F6U9", "url": "https://www.uniprot.org/uniprotkb/A0A8D1F6U9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1F6U9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1F6U9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SJ92-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ92-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMPQLQFKDAFWCRDFTAHTGYEVLLQRLLDGRKMCKDVEELLRQRAQAEERYGKELVQIARKAGGQTEINSLRASFDSLKQQMENVGSSHIQLALALREELRSLEEFRERQKEQRKKFEAVMDRVQKSKLSLYKKAMESKKTYEQKCRDADDAEQIFERISANGQQKQVEKSQNKAKQCKDSAMEAERVYRQNIEQLEKVRGEWEQEHRTTCEAFQLQEFDRLTILRNALWVHCNQLSMQCVKDDELYEEVRVTLEGCSVDADIDGFIQAKSTGTEPPAPVPYQNYYDREISPSCGSPGVQPSCGMIKRFSGLLHGSPKNASPAASAETLTPIPDRNEGVYAAINVQEVPGPPTLPAQDYRALYDYTAQNPDELDITAGDILEVILEGEDGWWTVQRNGQRGFVPGSYLEKL", "length": 413, "header": "tr|F1SJ92-1|F1SJ92_PIG Isoform 1 of Proline-serine-threonine phosphatase-interacting protein 1 OS=Sus scrofa OX=9823 GN=PSTPIP1 PE=4 SV=3 CANONICAL=F1SJ92-1" }, "isoforms": [ { "isoform_ac": "A0A8D1F6U9-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ92/entry#A0A8D1F6U9-1", "sequence": { "sequence": "MMPQLQFKDAFWCRDFTAHTGYEVLLQRLLDGRKMCKDVEELLRQRAQAEERYGKELVQIARKAGGQTEINSLRASFDSLKQQMENVGSSHIQLALALREELRSLEEFRERQKEQRKKFEAVMDRVQKSKLSLYKKAMESKKTYEQKCRDADDAEQIFERISANGQQKQVEKSQNKAKQCKDSAMEAERVYRQNIEQLEKVRGEWEQEHRTTCEAFQLQEFDRLTILRNALWVHCNQLSMQCVKDDELYEEVRVTLEGCSVDADIDGFIQAKSTGTEPPAPVPYQNYYDREISPSCGSPGVQPSCGMIKRVPTAAPSPLGEAGAQKSWRPRGSAGSRFSGLLHGSPKNASPAASAASTETLTPIPDRNEGVYAAINVQEVPGPPTLPAQDYRALYDYTAQNPDELDITAGDILEVILEGEDGWWTVQRNGQRGFVPGSYLEKL", "length": 443, "header": "tr|A0A8D1F6U9-1|A0A8D1F6U9_PIG Computationally mapped isoform of Proline-serine-threonine phosphatase-interacting protein 1 OS=Sus scrofa OX=9823 GN=PSTPIP1 PE=4 SV=1 CANONICAL=F1SJ92-1" }, "locus": { "chromosome": "7", "start_pos": 57145061, "end_pos": 57103182, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073396.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073396.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064705.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064705.1" } ] } }, { "isoform_ac": "F1SJ92-1", "url": "https://www.uniprot.org/uniprotkb/F1SJ92/entry#F1SJ92-1", "sequence": { "sequence": "MMPQLQFKDAFWCRDFTAHTGYEVLLQRLLDGRKMCKDVEELLRQRAQAEERYGKELVQIARKAGGQTEINSLRASFDSLKQQMENVGSSHIQLALALREELRSLEEFRERQKEQRKKFEAVMDRVQKSKLSLYKKAMESKKTYEQKCRDADDAEQIFERISANGQQKQVEKSQNKAKQCKDSAMEAERVYRQNIEQLEKVRGEWEQEHRTTCEAFQLQEFDRLTILRNALWVHCNQLSMQCVKDDELYEEVRVTLEGCSVDADIDGFIQAKSTGTEPPAPVPYQNYYDREISPSCGSPGVQPSCGMIKRFSGLLHGSPKNASPAASAETLTPIPDRNEGVYAAINVQEVPGPPTLPAQDYRALYDYTAQNPDELDITAGDILEVILEGEDGWWTVQRNGQRGFVPGSYLEKL", "length": 413, "header": "tr|F1SJ92-1|F1SJ92_PIG Isoform 1 of Proline-serine-threonine phosphatase-interacting protein 1 OS=Sus scrofa OX=9823 GN=PSTPIP1 PE=4 SV=3 CANONICAL=F1SJ92-1" }, "locus": { "chromosome": "7", "start_pos": 57145061, "end_pos": 57103182, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002092.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002092.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002042.2", "url": "https://www.ensembl.org/id/ENSSSCP00000002042.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "pmid": "" }, { "name": "plasma membrane", 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"https://www.ebi.ac.uk/QuickGO/term/GO:0001931", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "pmid": "" }, { "name": "inflammatory response", "id": "GO:0006954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006954", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "pmid": "" }, { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "F1SJ92", "url": "https://www.uniprot.org/uniprotkb/F1SJ92" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SHY6-1", "uniprot_ac": "F1SHY6", "uniprot_id": "F1SHY6_PIG", "mass": { "chemical_mass": 76264.0, "monoisotopic_mass": 76264.0 }, "refseq": {}, "gene_names": [ { "name": "AMER3", "type": "recommended", "evidence": [ { "id": "F1SHY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHY6" } ] } ], "protein_names": [ { "name": "APC membrane recruitment protein 3", "type": "synonym", "evidence": [ { "id": "F1SHY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SHY6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SHY6", "url": "https://www.uniprot.org/uniprotkb/F1SHY6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AMER3", "url": "https://www.uniprot.org/uniprotkb/F1SHY6", "locus": { "chromosome": "15", "start_pos": 57044524, "end_pos": 57038328, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016391", "url": "https://www.ensembl.org/id/ENSSSCG00000016391" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016391", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016391", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR019003", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019003", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GAPLSMC", "url": "https://omabrowser.org/oma/group/GAPLSMC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22237", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22237", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22237:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22237:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09422", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09422", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SHY6", "url": "https://www.uniprot.org/uniprotkb/F1SHY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SHY6-1", "url": "https://www.uniprot.org/uniprotkb/F1SHY6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELKRGKTFIKSSLQISHQKPPESAATALAREDAGSWSVSRGGQQWPHSERGPQVSPSAQGYDRCSDRGAQPDADGGPIAPCGAAFKLMRNSKTHDSIPGAHRAAPTATGQLVGSASFPGPPSSQRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTENLASLEAKGKGLSSPEGPSEAGGQQGKAFFLLGEGPGLDSLGQDLSDSELLPDSPFDLCRALCEDVASLKSFDSLTGCGEIFADESSVPSLELNEGLESPARASQAPDSKASRGPFQGSVEQLASPARNELSGFAKFWDHVNHSVRQQQRALLGPWLGGPPGSDTDQPRPSAAGLAELPLYPHSGSKASSIDTGTPKSERPESVSTSDEGYYDSFSPGLEEDKKEAPSPGTPAATFPRDSYSGDALYELFYDPSEGPGGPSLDDDLCMSESLSGPALGAPLSMCSFHVGAEENLAPAPGPDLLSQGFLQSSWRGKECLLKLCDTELAITMGIVNWLRRGPERRASPASVPGEPISPPEGLVEKPGAGSGKVGLGPVKMEDREPQALEAGRTSASSAPSRQELWACSGIKSPHAGVSGVLAEAKQRPSSLSRDPSQECVQVSGEEGTQGCPEGSFSSVGSAASEATNMSSKNKVPNPSAWLGCQEPRLPGNLGCFQGAWRPGLGESTLDSELTLSDCVAQVAALQIHPDCQPPRQSMSSGLCGQPQARGPDIL", "length": 725, "header": "tr|F1SHY6-1|F1SHY6_PIG Isoform 1 of APC membrane recruitment protein 3 OS=Sus scrofa OX=9823 GN=AMER3 PE=3 SV=2 CANONICAL=F1SHY6-1" }, "isoforms": [ { "isoform_ac": "F1SHY6-1", "url": "https://www.uniprot.org/uniprotkb/F1SHY6/entry#F1SHY6-1", "sequence": { "sequence": "MELKRGKTFIKSSLQISHQKPPESAATALAREDAGSWSVSRGGQQWPHSERGPQVSPSAQGYDRCSDRGAQPDADGGPIAPCGAAFKLMRNSKTHDSIPGAHRAAPTATGQLVGSASFPGPPSSQRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTENLASLEAKGKGLSSPEGPSEAGGQQGKAFFLLGEGPGLDSLGQDLSDSELLPDSPFDLCRALCEDVASLKSFDSLTGCGEIFADESSVPSLELNEGLESPARASQAPDSKASRGPFQGSVEQLASPARNELSGFAKFWDHVNHSVRQQQRALLGPWLGGPPGSDTDQPRPSAAGLAELPLYPHSGSKASSIDTGTPKSERPESVSTSDEGYYDSFSPGLEEDKKEAPSPGTPAATFPRDSYSGDALYELFYDPSEGPGGPSLDDDLCMSESLSGPALGAPLSMCSFHVGAEENLAPAPGPDLLSQGFLQSSWRGKECLLKLCDTELAITMGIVNWLRRGPERRASPASVPGEPISPPEGLVEKPGAGSGKVGLGPVKMEDREPQALEAGRTSASSAPSRQELWACSGIKSPHAGVSGVLAEAKQRPSSLSRDPSQECVQVSGEEGTQGCPEGSFSSVGSAASEATNMSSKNKVPNPSAWLGCQEPRLPGNLGCFQGAWRPGLGESTLDSELTLSDCVAQVAALQIHPDCQPPRQSMSSGLCGQPQARGPDIL", "length": 725, "header": "tr|F1SHY6-1|F1SHY6_PIG Isoform 1 of APC membrane recruitment protein 3 OS=Sus scrofa OX=9823 GN=AMER3 PE=3 SV=2 CANONICAL=F1SHY6-1" }, "locus": { "chromosome": "15", "start_pos": 57042408, "end_pos": 57040234, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017847.3", "url": "https://www.ensembl.org/id/ENSSSCT00000017847.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017366.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017366.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 404, "start_aa": "Thr", "end_pos": 404, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr404", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SHY6", "url": "https://www.uniprot.org/uniprotkb/F1SHY6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D3ZHS8-1", "protein_name": "APC membrane recruitment protein 3", "gene_name": "Amer3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELRRGKTFIKSSVQISHEKLIDSPAKEDPDTWSLSLGEQQRAHGERSSQTSPCAQGYGRCPNKEVLSDPEGGPVPLCGNTFKLVRKSKTHDNVPGAVKAAAPTGQMVGSTSFTETPGGQRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRSKKCFRNLFHMRRSKTENLASLSAKGKNLSPPGVPAQQGKPFFSMGEGLGLDSLCQDLSDSEFLHDSPFDLCSALCEDVASLKSFDSLTGCGEIFADGSSVPSVELKDGPESPAHSPQALDSKTPCGPSQGSMEQLMSPAQNEASDFTKFWDSVNRSVQQQQRALLGPWLMSPQGTETDQPRLDSSGLAELPLFPCRGPPSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEEKKEAASPATPAAAFPRDSYSGDALYELFYDPSEAPVGPILDDDCVSESLSGPALGTPLSMCSFRVGAEENLAPAPGPDLLSQGFLQSTWKGKECLLKLCDTELAITMGIVNWLRRTPQATAPTPASTPASTPAIVLREPAAPPDPHRVLRGTSADMKGREDQALDMGKDVQCFSPSRQVPWAHSGTKDLLIREREVQGEPARGINTPSKDGSLEEGTQNVSEGRSSSEVTTTTSISRNSKAVNTATRLSSQKELGTPGNLRCSQGSLRPGPGGSALDPGPMLVGCVAALQIYPDSHSPRQDKGNGLLWKPQAWGPNAVLKKPTSSKRNEAAACGLSSSASPQDQRCHDLFLDLNQLTLEPSRLGTQACASVDSLPQQLCPRAPEQVPHRGSVGS", "length": 784 }, "evidence": [ { "id": "F1SHY6", "url": "https://omabrowser.org/oma/group/F1SHY6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MRJ5-1", "protein_name": "APC membrane recruitment protein 3", "gene_name": "AMER3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MELKRGKTFIKSSLQTDHEKPPDPAATALTTEDAISLGGQQLPHSERGPQVSPSTQGYNRCSDREAQPDTNGGPAALCGTTFKLVRKSKNHDSVPRADRAATATGQLVGSASFPGTPSSQRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTENLPSTKGEGLSSPEGPSETGGQRGIAFLPLGEELGLDGQCQDLSDSEFLPDSSFDLCRALCEDVASLKSFDSLTGCGEIFADESSVPSLELNEGLASPAQRSQASDSKTFRGPFQGSIEQLASPAQNEMSDFAKFWDHVNHSVRQQQHALLGPWLGGPQASDTDQPRPDAARLAELPLCPCRDPHSSSKASSTDTGTPKSERPESVSTSDEGYYDSFSPGLEEDKKEAPSPGTPTAAFPRDSYSGDALYELFYDPAEGPGSPSLDDDLCVSESPSGPAPGAPLSMCSFHVGAEENLAPVPGPDLLSQGFLQSSWRGKECLLKLCDTELAITMGIINWLRRGPELRALPASALREPATPSGGLVEKPGAGSEKMGLGPVKLDGRGPQALDAGRISVSSIPSRKELWACSGPKGLLAGVSKVLAGAKQETKSSSCDPSLECVPVSGERGTQGHPEGSFSPLGSAAAMGSNTFRKNKVPHPSVWPGSQEPRLPRNLGCFQGPWRPGPGGSTMDSKLTLTGCVAQVEALQINPDCQSPAAHPPRQNTGSGLCGKPQARGPDILQQEQPNGFPNLAAICGLPSLANPLHIPQDQRCPGSILDLSQLREEPTTLNVQAHVSVEDRPLQLNSRAMEQAAQRRQLDL", "length": 807 }, "evidence": [ { "id": "F1SHY6", "url": "https://omabrowser.org/oma/group/F1SHY6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6NS69-1", "protein_name": "APC membrane recruitment protein 3", "gene_name": "Amer3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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isoform of CD200 receptor 1 OS=Sus scrofa OX=9823 GN=CD200R1 PE=3 SV=2 CANONICAL=F1SLU1-1" }, "locus": { "chromosome": "13", "start_pos": 146993446, "end_pos": 146953369, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032815.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032815.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028917.2", "url": "https://www.ensembl.org/id/ENSSSCP00000028917.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SLU1", "url": "https://www.uniprot.org/uniprotkb/F1SLU1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-198933", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-198933", "resource": "Reactome", "description": "Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "F1SLU1", "url": "https://www.uniprot.org/uniprotkb/F1SLU1" } ], "pmid": "" }, { "name": 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"id": "F1SLU1", "url": "https://www.uniprot.org/uniprotkb/F1SLU1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 174, "end_pos": 176, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 203, "end_pos": 205, "annotation": "n_glycosylation_sequon" }, { "start_pos": 24, "end_pos": 26, "annotation": "n_glycosylation_sequon" }, { "start_pos": 71, "end_pos": 73, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SLU1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 213, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": 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"database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FL20", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL20", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FL20-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FL20-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FML6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FML6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FML6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FML6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FRD5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FRD5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FRD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FRD5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SE81", "url": "https://www.uniprot.org/uniprotkb/F1SE81", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SE81-1", "url": "https://www.uniprot.org/uniprotkb/F1SE81-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIYYFPLQTLQLTGLEAFATAFLSPVFLTIAPFWKLVNKKWTLALLRIITLGGIASFQAPNATLRLAVLSLGLSSSLVVQAVTWWTGSGVQRYLRVWGFILGQILLLVLRIWYTSLNPIWVYPMANRMILTLSAIATMDRIYSDSDCRQPEGKKTDEAAKAMASRPNWVLAGAAFGSLTFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGAVLLSLASGLMLSPCSWFPGSSFAWWITGATSAAGLLYLPTWAAAVSGCVLAVFTASVWPQVLGHLISSGSSPGKAMTTAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGAVMLIIGLDMLFGPKKSLDSLLQTKNSPKVLFRKSEKYAKLFLWLLVGVGLLGLGLRLKAYEKKLGKGAPATEVSAAIWPFRFGFDNDGWSNLERSAQLLNQTGADFITILESDASKPYIGNNDLTMWLGEKLGFYTDFGPSARDHTWGIMVLSRYPIVKSEHHLLPSPEGEIAPAITLTVTISNRLVDFVVTHFGNDEDDLDRKLQAIAVSKLLKNSSEQVIFLGYITSKPGSRDYRQLIEHGNVKDIDSTDRDRWCEYIMYRGLIRLGYARISRAELSDSEIQMAKFRIPDDPINYRDNQKVVTDHRKVPEKIHFNPRFGSYKEGHNAENNHHFHMSTPKYFL", "length": 672, "header": "tr|F1SE81-1|F1SE81_PIG Isoform 1 of PGAP2-interacting protein OS=Sus scrofa OX=9823 GN=CWH43 PE=3 SV=4 CANONICAL=F1SE81-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FL20-1", "url": "https://www.uniprot.org/uniprotkb/F1SE81/entry#A0A8W4FL20-1", "sequence": { "sequence": "QGYVSWSLCHDLGPMIYYFPLQTLQLTGLEAFATAFLSPVFLTIAPFWKLVNKKWTLALLRIITLGGIASFQAPNATLRLAVLSLGLSSSLVVQAVTWWTGSGVQRYLRVWGFILGQILLLVLRIWYTSLNPIWVYPMANRMILTLSAIATMDRIYSDSDCRQPEGKKTDEAAKAMASRPNWVLAGAAFGSLTFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFG", "length": 225, "header": "tr|A0A8W4FL20-1|A0A8W4FL20_PIG Computationally mapped isoform of Cell wall biosis 43 C-terminal homolog OS=Sus scrofa OX=9823 GN=CWH43 PE=4 SV=1 CANONICAL=F1SE81-1" }, "locus": { "chromosome": "8", "start_pos": 38883483, "end_pos": 38873311, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105824.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105824.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079902.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079902.1" } ] } }, { "isoform_ac": "A0A8W4FML6-1", "url": "https://www.uniprot.org/uniprotkb/F1SE81/entry#A0A8W4FML6-1", "sequence": { "sequence": "THGTWRFPGYVSWSLCHDLGPMIYYFPLQTLQLTGLEAFATAFLSPVFLTIAPFWKLVNKKWTLALLRIITLGGIASFQAPNATLRLAVLSLGLSSSLVVQAVTWWTGSGVQRYLRVWGFILGQILLLVLRIWYTSLNPIWVYPMANRMILTLSAIATMDRIYSDSDCRQPEGKKTDEAAKAMASRPNWVLAGAAFGSLTFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGAVLLSLASGLMLSPCSWFPGSSFAWWITGATSAAGLLYLPTWAAAVSGCVLAVFTASVWPQVLGHLISSGSSPGKAMTTAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGAVMLIIGLDMLFGPKKSLDSLLQTKNSPKVLFRKSEKYAKLFLWLLVGVGLLGLGLRLKAYEKKLGKGAPATEVSAAIWPFRFGFDNDGWSNLERSAQLLNQTGADFITILESDASKPYIGNNDLTMWLGEKLGFYTDFGPSARDHTWGIMVLSRYPIVKSEHHLLPSPEGEIAPAITLTVTISNRLVDFVVTHFGNDEDDLDRKLQAIAVSKLLKNSSEQVIFLGYITSKPGSRDYRQLIEHGNVKDIDSTDRDRWCEYIMYRGLIRLGYARISRAELSDSEIQMAKFRIPDDPINYRDNQKVVTDHRKVPEKIHFNPRFGSYKEGHNAENNHHFHMSTPKYFL", "length": 693, "header": "tr|A0A8W4FML6-1|A0A8W4FML6_PIG Computationally mapped isoform of PGAP2-interacting protein OS=Sus scrofa OX=9823 GN=CWH43 PE=3 SV=1 CANONICAL=F1SE81-1" }, "locus": { "chromosome": "8", "start_pos": 38943480, "end_pos": 38872789, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101968.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101968.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080433.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080433.1" } ] } }, { "isoform_ac": "A0A8W4FRD5-1", "url": "https://www.uniprot.org/uniprotkb/F1SE81/entry#A0A8W4FRD5-1", "sequence": { "sequence": "SSWAWQGKGRNSVSRSQGRPESGTGQPARARYVSWSLCHDLGPMIYYFPLQTLQLTGLEAFATAFLSPVFLTIAPFWKLVNKKWTLALLRIITLGGIASFQAPNATLRLAVLSLGLSSSLVVQAVTWWTGSGVQRYLRVWGFILGQILLLVLRIWYTSLNPIWVYPMANRMILTLSAIATMDRIYSDSDCRQPEGKKTDEAAKAMASRPNWVLAGAAFGSLTFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGAVLLSLASGLMLSPCSWFPGSSFAWWITGATSAAGLLYLPTWAAAVSGCVLAVFTASVWPQVLGHLISSGSSPGKAMTTAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGAVMLIIGLDMLFGPKKSLDSLLQTKNSPKVLFRKSEKYAKLFLWLLVGVGLLGLGLRLKAYEKKLGKGAPATEVSAAIWPFRFGFDNDGWSNLERSAQLLNQTGADFITILESDASKPYIGNNDLTMWLGEKLGFYTDFGPSARDHTWGIMVLSRYPIVKSEHHLLPSPEGEIAPAITLTVTISNRLVDFVVTHFGNDEDDLDRKLQAIAVSKLLKNSSEQVIFLGYITSKPGSRDYRQLIEHGNVKDIDSTDRDRWCEYIMYRGLIRLGYARISRAELSDSEIQMAKFRIPDDPINYRDNQKVVTDHRKVPEKIHFNPRFGSYKEGHNAENNHHFHMSTPKYFL", "length": 715, "header": "tr|A0A8W4FRD5-1|A0A8W4FRD5_PIG Computationally mapped isoform of PGAP2-interacting protein OS=Sus scrofa OX=9823 GN=CWH43 PE=3 SV=1 CANONICAL=F1SE81-1" }, "locus": { "chromosome": "8", "start_pos": 38943480, "end_pos": 38873207, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092743.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092743.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081161.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081161.1" } ] } }, { "isoform_ac": "F1SE81-1", "url": "https://www.uniprot.org/uniprotkb/F1SE81/entry#F1SE81-1", "sequence": { "sequence": "MIYYFPLQTLQLTGLEAFATAFLSPVFLTIAPFWKLVNKKWTLALLRIITLGGIASFQAPNATLRLAVLSLGLSSSLVVQAVTWWTGSGVQRYLRVWGFILGQILLLVLRIWYTSLNPIWVYPMANRMILTLSAIATMDRIYSDSDCRQPEGKKTDEAAKAMASRPNWVLAGAAFGSLTFLTHWVFGEVSLVSRWAVSGHPHPGPDPNPFGGAVLLSLASGLMLSPCSWFPGSSFAWWITGATSAAGLLYLPTWAAAVSGCVLAVFTASVWPQVLGHLISSGSSPGKAMTTAMIFYLLEIFFCAWCTAFKFVPGGVYARERSDVLLGAVMLIIGLDMLFGPKKSLDSLLQTKNSPKVLFRKSEKYAKLFLWLLVGVGLLGLGLRLKAYEKKLGKGAPATEVSAAIWPFRFGFDNDGWSNLERSAQLLNQTGADFITILESDASKPYIGNNDLTMWLGEKLGFYTDFGPSARDHTWGIMVLSRYPIVKSEHHLLPSPEGEIAPAITLTVTISNRLVDFVVTHFGNDEDDLDRKLQAIAVSKLLKNSSEQVIFLGYITSKPGSRDYRQLIEHGNVKDIDSTDRDRWCEYIMYRGLIRLGYARISRAELSDSEIQMAKFRIPDDPINYRDNQKVVTDHRKVPEKIHFNPRFGSYKEGHNAENNHHFHMSTPKYFL", "length": 672, "header": "tr|F1SE81-1|F1SE81_PIG Isoform 1 of PGAP2-interacting protein OS=Sus scrofa OX=9823 GN=CWH43 PE=3 SV=4 CANONICAL=F1SE81-1" }, "locus": { "chromosome": "8", "start_pos": 38943480, "end_pos": 38873436, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009664.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009664.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009415.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009415.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SE81", "url": "https://www.uniprot.org/uniprotkb/F1SE81" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SE81", "url": "https://www.uniprot.org/uniprotkb/F1SE81" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F1SE81", "url": "https://www.uniprot.org/uniprotkb/F1SE81" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "GPI anchor biosynthetic process", "id": "GO:0006506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006506", "evidence": [ { "database": "UniProtKB", "id": "F1SE81", "url": "https://www.uniprot.org/uniprotkb/F1SE81" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 428, "end_pos": 430, "annotation": "n_glycosylation_sequon" }, { "start_pos": 544, "end_pos": 546, "annotation": "n_glycosylation_sequon" }, { "start_pos": 61, "end_pos": 63, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SE81-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 672, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SE81-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SE81" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SE81" }, { "id": "PF23226", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23226" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PGAP2IP C-terminal nuclease-like", "eco_id": "ECO_0000259", "start_pos": 401, "end_pos": 630, "start_aa": "Val", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SE81" }, { "id": "PF23022", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23022" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PGAP2IP first transmembrane", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 122, "start_aa": "Met", "end_aa": "Tyr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SE81", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SE81" }, { "id": "PF23021", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23021" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PGAP2IP second transmembrane", "eco_id": "ECO_0000259", "start_pos": 165, "end_pos": 343, "start_aa": "Arg", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 428, "end_pos": 430 }, { "start_pos": 544, "end_pos": 546 }, { "start_pos": 61, "end_pos": 63 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SH73-1", "uniprot_ac": "F1SH73", "uniprot_id": "F1SH73_PIG", "mass": { "chemical_mass": 61556.0, "monoisotopic_mass": 61556.0 }, "refseq": {}, "gene_names": [ { "name": "IRAK3", "type": "recommended", "evidence": [ { "id": "F1SH73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SH73" } ] } ], "protein_names": [ { "name": "Interleukin 1 receptor associated kinase 3", "type": "synonym", "evidence": [ { "id": "F1SH73", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SH73/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Putative inactive protein kinase which regulates signaling downstream of immune receptors including IL1R and Toll-like receptors. Inhibits dissociation of IRAK1 and IRAK4 from the Toll-like receptor signaling complex by either inhibiting the phosphorylation of IRAK1 and IRAK4 or stabilizing the receptor complex. Upon IL33-induced lung inflammation, positively regulates expression of IL6, CSF3, CXCL2 and CCL5 mRNAs in dendritic cells.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QF58", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF58#function" }, { "database": "UniProtKB", "id": "ARBA00055022", "url": "https://www.uniprot.org/uniprotkb/ARBA00055022#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SH73", "url": "https://www.uniprot.org/uniprotkb/F1SH73" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IRAK3", "url": "https://www.uniprot.org/uniprotkb/F1SH73", "locus": { "chromosome": "5", "start_pos": 30609921, "end_pos": 30526793, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000475", "url": 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SV=4 CANONICAL=F1SH73-1" }, "locus": { "chromosome": "5", "start_pos": 30598951, "end_pos": 30526954, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000513.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000513.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000505.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000505.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SH73", "url": "https://www.uniprot.org/uniprotkb/F1SH73" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-9020702", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9020702", "resource": "Reactome", "description": "Interleukin-1 signaling" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 21, "go_terms": [ { "name": "negative regulation of cytokine-mediated signaling pathway", "id": "GO:0001960", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001960", "evidence": [ { "database": "UniProtKB", "id": "F1SH73", "url": "https://www.uniprot.org/uniprotkb/F1SH73" } ], "pmid": "" }, { "name": "interleukin-1-mediated signaling pathway", "id": "GO:0070498", 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"pmid": "" }, { "name": "response to exogenous dsRNA", "id": "GO:0043330", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043330", "evidence": [ { "database": "UniProtKB", "id": "F1SH73", "url": "https://www.uniprot.org/uniprotkb/F1SH73" } ], "pmid": "" }, { "name": "negative regulation of protein catabolic process", "id": "GO:0042177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042177", "evidence": [ { "database": "UniProtKB", "id": "F1SH73", "url": "https://www.uniprot.org/uniprotkb/F1SH73" } ], "pmid": "" }, { "name": "lipopolysaccharide-mediated signaling pathway", "id": "GO:0031663", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031663", "evidence": [ { "database": "UniProtKB", "id": "F1SH73", "url": "https://www.uniprot.org/uniprotkb/F1SH73" } ], "pmid": "" }, { "name": "negative regulation of interleukin-12 production", "id": "GO:0032695", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032695", "evidence": [ { "database": "UniProtKB", "id": "F1SH73", "url": 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"https://www.uniprot.org/uniprotkb/F1SA96-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "LDFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWANIILPRLLRNGDGSDSPVAVTVFFGANDSALKDENPKQHVPLAEFAANLKSMVQQLRAAGVPAAGLVLITPPPLCEAAWEQECLRQGSKLNRLNAVVGEYARACVQVAQDCGTDALDLWTLMQKDNQDFSSYLSDGLHLSPKGNEFVFSHLWPLIEKKVSSLPLRFPYWRDVAEATPERSLLGGGDQ", "length": 224, "header": "tr|F1SA96-1|F1SA96_PIG Isoform 1 of Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Sus scrofa OX=9823 GN=IAH1 PE=1 SV=4 CANONICAL=F1SA96-1" }, "isoforms": [ { "isoform_ac": "A0A287B3A3-1", "url": "https://www.uniprot.org/uniprotkb/F1SA96/entry#A0A287B3A3-1", "sequence": { "sequence": "MGEREKCDVLNRGFSGYNTRWANIILPRLLRNGDGSDSPVAVTVFFGANDSALKDENPKQHVPLAEFAANLKSMVQQLRAAGVPAAGLVLITPPPLCEAAWEQECLRQGSKLNRLNAVVGEYARACVQVAQDCGTDALDLWTLMQKDNQDFSSYLSDGLHLSPKGNEFVFSHLWPLIEKKVSSLPLRFPYWRDVAEATPERSLLGGGDQ", "length": 209, "header": "tr|A0A287B3A3-1|A0A287B3A3_PIG Computationally mapped isoform of Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Sus scrofa OX=9823 GN=IAH1 PE=1 SV=1 CANONICAL=F1SA96-1" }, "locus": { "chromosome": "3", "start_pos": 126864120, "end_pos": 126854310, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039242.1", "url": "https://www.ensembl.org/id/ENSSSCT00000039242.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050751.1", "url": "https://www.ensembl.org/id/ENSSSCP00000050751.1" } ] } }, { "isoform_ac": "A0A287BPE6-1", "url": "https://www.uniprot.org/uniprotkb/F1SA96/entry#A0A287BPE6-1", "sequence": { "sequence": "MALCEAVARGSSGSWPRVLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWANIILPRLLRNGDGSDSPVAVTVFFGANDSALKDENPKQHVPLAEFAANLKSMVQQLRAAGVPAAGLVLITPPPLCEAAWEQECLRQGSKLNRLNAVVGEYARACVQVAQDCGTDALDLWTLMQKDNQDFSSYLSDGLHLSPKGNEFVFSHLWPLIEKKVSSLPLRFPYWRDVAEATPERSLLGGGDQ", "length": 249, "header": "tr|A0A287BPE6-1|A0A287BPE6_PIG Computationally mapped isoform of Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Sus scrofa OX=9823 GN=IAH1 PE=1 SV=1 CANONICAL=F1SA96-1" }, "locus": { "chromosome": "3", "start_pos": 126865722, "end_pos": 126854310, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045200.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045200.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058046.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058046.1" } ] } }, { "isoform_ac": "F1SA96-1", "url": "https://www.uniprot.org/uniprotkb/F1SA96/entry#F1SA96-1", "sequence": { "sequence": "LDFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWANIILPRLLRNGDGSDSPVAVTVFFGANDSALKDENPKQHVPLAEFAANLKSMVQQLRAAGVPAAGLVLITPPPLCEAAWEQECLRQGSKLNRLNAVVGEYARACVQVAQDCGTDALDLWTLMQKDNQDFSSYLSDGLHLSPKGNEFVFSHLWPLIEKKVSSLPLRFPYWRDVAEATPERSLLGGGDQ", "length": 224, "header": "tr|F1SA96-1|F1SA96_PIG Isoform 1 of Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Sus scrofa OX=9823 GN=IAH1 PE=1 SV=4 CANONICAL=F1SA96-1" }, "locus": { "chromosome": "3", "start_pos": 126864783, "end_pos": 126854310, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009452.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009452.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009209.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009209.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA96", "url": "https://www.uniprot.org/uniprotkb/F1SA96" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622648", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622648", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q2TAA2-1", "protein_name": "Isoamyl acetate-hydrolyzing esterase 1 homolog", "gene_name": "IAH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MALCEAAGCGSALLWPRLLLFGDSITQFSFQQGGWGASLADRLVRKCDVLNRGFSGYNTRWAKIILPRLIRKGNSLDIPVAVTIFFGANDSALKDENPKQHIPLEEYAANLKSMVQYLKSVDIPENRVILITPTPLCETAWEEQCIIQGCKLNRLNSVVGEYANACLQVAQDCGTDVLDLWTLMQDSQDFSSYLSDGLHLSPKGNEFLFSHLWPLIEKKVSSLPLLLPYWRDVAEAKPELSLLGDGDH", "length": 248 }, "evidence": [ { "id": "F1SA96", "url": "https://omabrowser.org/oma/group/F1SA96/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q3SZ16-1", "protein_name": "Isoamyl acetate-hydrolyzing esterase 1 homolog", "gene_name": "IAH1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MALCEAVASGSPLVWPRVLLFGDSITQFSFQQGGWGASLADMLVRKCDVLNRGFSGYNTRWAKIILPRLVRKGSGLDSPVAVTIFFGANDSALKDENPKQHVPLEEFVANLRSMVRYLRSVDVPEGRLILITPPPLCEAAWAQECLQQGCKLNRLNSVVGEYARACLQVAQDCGADALDLWSLMQKDGQDFSSYLSDGLHLSPKGNEFVFSHLWPLIEKKVSSLPFLLPYWRDIAEARPELSLLGDGDH", "length": 249 }, "evidence": [ { "id": "F1SA96", "url": "https://omabrowser.org/oma/group/F1SA96/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q503L4-1", "protein_name": "Isoamyl acetate-hydrolyzing esterase 1 homolog", "gene_name": "iah1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9DB29-1", "protein_name": "Isoamyl acetate-hydrolyzing esterase 1 homolog", "gene_name": "Iah1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSLCERAASGSALLWPRVLLFGDSITQFSFQQGGWGSLLADRLVRKCDVLNRGFSGYNTRWAKIILPRLIRKGPGMENPVAVTIFFGANDSSLKDENPKQHVPLDEYSANLRDMVQYLRSVDVPRERVILITPPPLCEAAWEKECVLKGCKLNRLNSVVGEYANACLQVARDCGTDVLDLWTLMQKDSQDFSSYLSDGLHLSPMGNEFLFLNLCPLLDKKVSSLPWLLPYWKDVEEAKPELSLLGDGDY", "length": 249 }, "evidence": [ { "id": "F1SA96", "url": "https://omabrowser.org/oma/group/F1SA96/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "1-alkyl-2-acetylglycerophosphocholine esterase activity", "id": "GO:0003847", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003847", "evidence": [ { "database": "UniProtKB", "id": "F1SA96", "url": 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"pdb_chain": "global", "start_pos": 1, "end_pos": 224, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SA96-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SA96" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SA96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA96" }, { "id": "PF13472", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13472" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SGNH hydrolase-type esterase", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 182, "start_aa": "Gln", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMI1-1", "uniprot_ac": "F1SMI1", "uniprot_id": "F1SMI1_PIG", "mass": { "chemical_mass": 142570.0, "monoisotopic_mass": 142570.0 }, "refseq": { "ac": "XP_020930164", "name": "astrotactin-2 isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930164" }, "gene_names": [ { "name": "ASTN2", "type": "recommended", "evidence": [ { "id": "F1SMI1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ] }, { "name": "ASTN2", "type": "synonym", "evidence": [ { "id": "XP_020930164", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930164" } ] } ], "protein_names": [ { "name": "Astrotactin-2", "type": "recommended", "evidence": [ { "id": "F1SMI1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMI1/entry#names_and_taxonomy" } ] }, { "name": "astrotactin-2 isoform X4", "type": "synonym", "evidence": [ { "id": "XP_020930164", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930164" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ASTN2", "url": "https://www.uniprot.org/uniprotkb/F1SMI1", "locus": { "chromosome": "1", "start_pos": 256825486, "end_pos": 257740977, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005502", "url": "https://www.ensembl.org/id/ENSSSCG00000005502" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005502", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005502", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00063", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00063", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100523883", "url": "https://www.ncbi.nlm.nih.gov/gene/100523883", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003961", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003961", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020864", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020864", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026995", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026995", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040510", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040510", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040685", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040685", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045574", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045574", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100523883", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523883", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VXCPEEL", "url": "https://omabrowser.org/oma/group/VXCPEEL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287B967", "url": "https://www.orthodb.org/?gene=A0A287B967", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16592", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16592", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16592:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16592:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01823", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01823", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18411", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18411", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18577", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18577", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19441", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19441", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19743", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19743", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020930164", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930164", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B967", "url": "https://www.uniprot.org/uniprotkb/A0A287B967", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B967-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B967-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RMD9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMD9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RMD9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RMD9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMI1-1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAAGARRSTGPSSGLRGRLRLGFHPAPPPLLLLFLLLLPPPQLLAGATAAASREPDSPCRLKTVTVSTLPALRESDIGWSGTRAGSGTGTGTGAGAAAAAAAASPGSAGSTGTAAESRLLLFVRNELPGRIAVQDDLDNTELPFFTLEMSGTAADISLVHWRQQWLENGTLYFHVSMSSSGQLARATAPTLQEPSEIVEEQMHIVHISVMGGLIALLLLLLVFTVALYAQRRWQKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRSSRLQAHNSVIGVPIRETPILDDYDYEEDEDPPRRANHVSREDEFGSQVTHTLDSLGRSGEEKGDFEKKGGISFGRTKGTSGSEADDETQLTFYTEQYRSRRRSKGLLKSPVNKTALTLIAVSSCILAMVCGSQMSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDPETGECSCHEGYAPDPVHRHLCVRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSSGCVCPEELKPMKDGSGCYDHSKGIDCSDGFNGGCEQLCLQQTLPLPYDATSSTIFMFCGCVEEYKLAPDGKSCLMLSDVCEGPKCLKADSKFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLSAGFTSVLKILTKESSREELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTELGSKKELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCDLSAFDASGLPNCSPLPQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAHIQSRVDTVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYGESKGR", "length": 1289, "header": "tr|F1SMI1-1|F1SMI1_PIG Isoform 1 of Astrotactin-2 OS=Sus scrofa OX=9823 GN=ASTN2 PE=3 SV=3 CANONICAL=F1SMI1-1" }, "isoforms": [ { "isoform_ac": "A0A287B967-1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1/entry#A0A287B967-1", "sequence": { "sequence": "MAAAGARRSTGPSSGLRGRLRLGFHPAPPPLLLLFLLLLPPPQLLAGATAAASREPDSPCRLKTVTVSTLPALRESDIGWSGTRAGSGTGTGTGAGAAAAAAAASPGSAGSTGTAAESRLLLFVRNELPGRIAVQDDLDNTELPFFTLEMSGTAADISLVHWRQQWLENGTLYFHVSMSSSGQLARATAPTLQEPSEIVEEQMHIVHISVMGGLIALLLLLLVFTVALYAQRRWQKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRSSRLQAHNSVIGVPIRETPILDDYDYEEDEDPPRRANHVSREDEFGSQVTHTLDSLGRSGEEKGDFEKKAAAEATQEPVESLMQKFKESFRANTPIEICQLQPAPRSASAGRRKRRSRSRGGISFGRTKGTSGSEADDETQLTFYTEQYRSRRRSKGLLKSPVNKTALTLIAVSSCILAMVCGSQMSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDPETGECSCHEGYAPDPVHRHLCVRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSSGCVCPEELKPMKDGSGCYDHSKGIDCSDGFNGGCEQLCLQQTLPLPYDATSSTIFMFCGCVEEYKLAPDGKSCLMLSDVCEGPKCLKADSKFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLSAGFTSVLKILTKESSREELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTELGSKKELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCDLSAFDASGLPNCSPLPQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAHIQSRVDTVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYGESKGR", "length": 1340, "header": "tr|A0A287B967-1|A0A287B967_PIG Computationally mapped isoform of Astrotactin-2 OS=Sus scrofa OX=9823 GN=ASTN2 PE=3 SV=1 CANONICAL=F1SMI1-1" }, "locus": { "chromosome": "1", "start_pos": 257740543, "end_pos": 256826060, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044339.2", "url": "https://www.ensembl.org/id/ENSSSCT00000044339.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053030.1", "url": "https://www.ensembl.org/id/ENSSSCP00000053030.1" } ] } }, { "isoform_ac": "A0A5G2RMD9-1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1/entry#A0A5G2RMD9-1", "sequence": { "sequence": "MSGTAADISLVHWRQQWLENGTLYFHVSMSSSGQLARATAPTLQEPSEIVEEQMHIVHISVMGGLIALLLLLLVFTVALYAQRRWQKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRSSRLQAHNSVIGVPIRETPILDDYDYEEDEDPPRRANHVSREDEFGSQVTHTLDSLGRSGEEKGDFEKKAAAEATQEPVESLMQKFKESFRANTPIEICQLQPAPRSASAGRRKRRSRSRGGISFGRTKGTSGSEADDETQLTFYTEQYRSRRRSKGLLKSPVNKTALTLIAVSSCILAMVCGSQMSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDPETGECSCHEGYAPDPVHRHLCVRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSSGCVCPEELKPMKDGSGCYDHSKGIDCSDGFNGGCEQLCLQQTLPLPYDATSSTIFMFCGCVEEYKLAPDGKSCLMLSDVCEGPKCLKADSKFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLSAGFTSVLKILTKESSREELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTELGSKKELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCDLSAFDASGLPNCSPLPQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAHIQSRVDTVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTCLTRKVSPF", "length": 1193, "header": "tr|A0A5G2RMD9-1|A0A5G2RMD9_PIG Computationally mapped isoform of Astrotactin-2 OS=Sus scrofa OX=9823 GN=ASTN2 PE=3 SV=2 CANONICAL=F1SMI1-1" }, "locus": { "chromosome": "1", "start_pos": 257608543, "end_pos": 256825802, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072503.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072503.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073734.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073734.2" } ] } }, { "isoform_ac": "F1SMI1-1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1/entry#F1SMI1-1", "sequence": { "sequence": "MAAAGARRSTGPSSGLRGRLRLGFHPAPPPLLLLFLLLLPPPQLLAGATAAASREPDSPCRLKTVTVSTLPALRESDIGWSGTRAGSGTGTGTGAGAAAAAAAASPGSAGSTGTAAESRLLLFVRNELPGRIAVQDDLDNTELPFFTLEMSGTAADISLVHWRQQWLENGTLYFHVSMSSSGQLARATAPTLQEPSEIVEEQMHIVHISVMGGLIALLLLLLVFTVALYAQRRWQKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRSSRLQAHNSVIGVPIRETPILDDYDYEEDEDPPRRANHVSREDEFGSQVTHTLDSLGRSGEEKGDFEKKGGISFGRTKGTSGSEADDETQLTFYTEQYRSRRRSKGLLKSPVNKTALTLIAVSSCILAMVCGSQMSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDPETGECSCHEGYAPDPVHRHLCVRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSSGCVCPEELKPMKDGSGCYDHSKGIDCSDGFNGGCEQLCLQQTLPLPYDATSSTIFMFCGCVEEYKLAPDGKSCLMLSDVCEGPKCLKADSKFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLSAGFTSVLKILTKESSREELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTELGSKKELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCDLSAFDASGLPNCSPLPQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAHIQSRVDTVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYGESKGR", "length": 1289, "header": "tr|F1SMI1-1|F1SMI1_PIG Isoform 1 of Astrotactin-2 OS=Sus scrofa OX=9823 GN=ASTN2 PE=3 SV=3 CANONICAL=F1SMI1-1" }, "locus": { "chromosome": "1", "start_pos": 257740543, "end_pos": 256826060, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006050.4", "url": "https://www.ensembl.org/id/ENSSSCT00000006050.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005896.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005896.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 951, "start_aa": "Thr", "end_pos": 951, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr951", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523883", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523883", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JYU3-1", "protein_name": "Astrotactin-2", "gene_name": "Astn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAGARRSPGPGLGLRGRPRLRFHPGPPPPPPLPLLLLFLLLLPPPPLLAGATAAAASREPDSPCRLKTVTVSTLPALRESDIGWSGARAGAAAGAGAGTGAGAGASAAAAAAAAASPGSAGSAGTAAESRLLLFVRNELPGRIAVQDDLDNTELPFFTLEMSGTAADISLVHWRQQWLENGTLYFHVSMSSSGQLAQATAPTLQEPSEIVEEQLHILHISVMGGLIALLLLLLVFTVALYAQRRWQKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRSTRLQAHNSVIGVPIRETPILDDYDYEEEEDPPRRANHVSREDEFDSQMTHALDSLGRPGEEKVEFEKKGGISFGRTKGTSGSEADDETQLTFYTEQYRSRRRSKGLLKSPVNKTALTLIAVSSCILAMVCGNQMSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDPETGECSCHEGYAPDPVHRHLCIRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSSGCVCPEELKPMKDGSGCYDHSKGIDCSDGFNGGCEQLCLQQTMPLPYDATSSTIFMFCGCVEEYKLAPDGKSCLMLSDVCDGPKCLKSDSKFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLSAGFTNVLKILTKESSRDELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTELGSKKELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKNALMSSYWCSGKGDVIDDWCRCDLSAFDASGLPNCSPLPQPVLRLSPTVEPSSTVVSLEWIDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAYIQSRVDTIPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYGETKGR", "length": 1302 }, "evidence": [ { "id": "F1SMI1", "url": "https://omabrowser.org/oma/group/F1SMI1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V1AM31-1", "protein_name": "Astrotactin-2", "gene_name": "ASTN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPPRRRSASPAPLPPVPPALLVLAVLLGGGPGAAAVAAAAASREPPGPCRVKTVTVSTLPVLRENDISWSGAPPPAAADSRLLLFVRSELPGRVAVQDDLDNTELPFFTLEMSGTVADISLVHWKQQWLENGTLYFHVSMSSAEQLSRATPPSLQEPSEIVEEQMHILHISVMGGLIALLLLLLVFTVALYAQRRWHKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRNSRLQAHNSVIGVPIRETPILDDYEDEEEEETPQRAEPSTREDEFGSQVTRTLESLGRGGEEKPDYEKKAPEVTQETVESLMQKFKESFRTNTPIEIGQLQPALRSTSVGRRKRRSRPRGGIGFGRAKGNSGSEADDETQLTFYTEQYRSRRRSKGSMKSPVNKTALTLIAVSSCILAMVCGSQLSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDQETGECSCHEGYAPDPMHRHLCVRTDWGHSEGPWPYTTLERGYDLVTGEQAPEKILRSTYSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSTGCVCPEDLRPMKDGTGCYDYSKGIDCSDGFNGGCEQLCLQQTLPLPHDPSSSTIFMFCGCVEEYKLAPDGKSCLMLSDICEGPKCLKSDAKFNDTLFGEMLHGYNNRSQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIKYDEAMGYPMVQHWRVRSNLYRVKLSSITLSSGFANILKILNKDSSREELLSFIQQFGSHYIAEALYGSEFSCTIHFPSKKVQQQLWLQYQKETTELGNKKELKSMPFITYLSGLLTAQMLSDDHLISGVEIHCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYALIQDNDTRQAFKGALMSSYWCSGKGDVIEDWCRCDLNAFDENGLPNCSPLPQPVLRLSPSVEPSSTVVSLEWLDVQPAIGTKVSDYVLHHKKVDEYTDTDLYTGESLSFADDLLSGLATSCVAAGRSHGDVPETSLYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDSKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLEKVSSHCSTLLRSAYIQSRTETMPYLFCRSEEVRPPGMVWYSILKDTKVTCEEKMVSMLRNTYGESKGR", "length": 1303 }, "evidence": [ { "id": "F1SMI1", "url": "https://omabrowser.org/oma/group/F1SMI1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O75129-1", "protein_name": "Astrotactin-2", "gene_name": "ASTN2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAGARLSPGPGSGLRGRPRLCFHPGPPPLLPLLLLFLLLLPPPPLLAGATAAASREPDSPCRLKTVTVSTLPALRESDIGWSGARAGAGAGTGAGAAAAAASPGSPGSAGTAAESRLLLFVRNELPGRIAVQDDLDNTELPFFTLEMSGTAADISLVHWRQQWLENGTLYFHVSMSSSGQLAQATAPTLQEPSEIVEEQMHILHISVMGGLIALLLLLLVFTVALYAQRRWQKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRSSRLQTHNSVIGVPIRETPILDDYDCEEDEEPPRRANHVSREDEFGSQVTHTLDSLGHPGEEKVDFEKKAAAEATQETVESLMQKFKESFRANTPIEIGQLQPPLRSTSAGKRKRRSKSRGGISFGRAKGTSGSEADDETQLTFYTEQYRSRRRSKGLLKSPVNKTALTLIAVSSCILAMVCGSQMSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDPETGECSCHEGYAPDPVHRHLCVRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSSGCVCPEELKPMKDGSGCYDHSKGIDCSDGFNGGCEQLCLQQTLPLPYDATSSTIFMFCGCVEEYKLAPDGKSCLMLSDVCEGPKCLKPDSKFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLAAGFTNVLKILTKESSREELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTELGSKKELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCDLSAFDANGLPNCSPLLQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQMAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAYIQSRVETVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYGESKGR", "length": 1339 }, "evidence": [ { "id": "F1SMI1", "url": "https://omabrowser.org/oma/group/F1SMI1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q80Z10-1", "protein_name": "Astrotactin-2", "gene_name": "Astn2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGARRSPGRGLGLRGRPRLGFHPGPPPPPPPPLLLLFLLLLPPPPLLAGATAAAASREPDSPCRLKTVTVSTLPALRESDIGWSGARTGAAAGAGAGTGAGAGAAAAAASAASPGSAGSAGTAAESRLLLFVRNELPGRIAVQDDLDNTELPFFTLEMSGTAADISLVHWRQQWLENGTLYFHVSMSSSGQLAQATAPTLQEPSEIVEEQMHILHISVMGGLIALLLLLLVFTVALYAQRRWQKRRRIPQKSASTEATHEIHYIPSVLLGPQARESFRSSRLQTHNSVIGVPIRETPILDDYDYEEEEEPPRRANHVSREDEFGSQMTHALDSLGRPGEEKVEFEKKAAAEATQETVESLMQKFKESFRANTPVEIGQLQPASRSSTSAGKRKRRNKSRGGISFGRTKGTSGSEADDETQLTFYTEQYRSRRRSKGLLKSPVNKTALTLIAVSSCILAMVCGNQMSCPLTVKVTLHVPEHFIADGSSFVVSEGSYLDISDWLNPAKLSLYYQINATSPWVRDLCGQRTTDACEQLCDPDTGECSCHEGYAPDPVHRHLCVRSDWGQSEGPWPYTTLERGYDLVTGEQAPEKILRSTFSLGQGLWLPVSKSFVVPPVELSINPLASCKTDVLVTEDPADVREEAMLSTYFETINDLLSSFGPVRDCSRNNGGCTRNFKCVSDRQVDSSGCVCPEELKPMKDGSGCYDHSKGIDCSDGFNGGCEQLCLQQTLPLPYDTTSSTIFMFCGCVEEYKLAPDGKSCLMLSDVCEGPKCLKPDSKFNDTLFGEMLHGYNNRTQHVNQGQVFQMTFRENNFIKDFPQLADGLLVIPLPVEEQCRGVLSEPLPDLQLLTGDIRYDEAMGYPMVQQWRVRSNLYRVKLSTITLSAGFTNVLKILTKESSRDELLSFIQHYGSHYIAEALYGSELTCIIHFPSKKVQQQLWLQYQKETTELGSKKELKSMPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRRPGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKNALMSSYWCSGKGDVIDDWCRCDLSAFDASGLPNCSPLPQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKVDEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYKFTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQTAYNTLMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLRSAYIQSRVDTIPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYGETKGR", "length": 1352 }, "evidence": [ { "id": "F1SMI1", "url": "https://omabrowser.org/oma/group/F1SMI1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "endosome", "id": "GO:0005768", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005768", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "cell cortex", "id": "GO:0005938", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005938", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "perikaryon", "id": "GO:0043204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043204", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "late endosome", "id": "GO:0005770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005770", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "clathrin-coated vesicle", "id": "GO:0030136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030136", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "cell pole", "id": "GO:0060187", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060187", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "neuron migration", "id": "GO:0001764", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001764", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "neuron cell-cell adhesion", "id": "GO:0007158", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007158", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "inositol 1,3,4,5 tetrakisphosphate binding", "id": "GO:0043533", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043533", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1SMI1", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1011, "end_pos": 1013, "annotation": "n_glycosylation_sequon" }, { "start_pos": 169, "end_pos": 171, "annotation": "n_glycosylation_sequon" }, { "start_pos": 383, "end_pos": 385, "annotation": "n_glycosylation_sequon" }, { "start_pos": 454, "end_pos": 456, "annotation": "n_glycosylation_sequon" }, { "start_pos": 720, "end_pos": 722, "annotation": "n_glycosylation_sequon" }, { "start_pos": 733, "end_pos": 735, "annotation": "n_glycosylation_sequon" }, { "start_pos": 970, "end_pos": 972, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMI1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMI1" }, { "id": "SM00457", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00457" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MACPF", "eco_id": "ECO_0000259", "start_pos": 801, "end_pos": 985, "start_aa": "Tyr", "end_aa": "Trp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 951 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1011, "end_pos": 1013 }, { "start_pos": 169, "end_pos": 171 }, { "start_pos": 383, "end_pos": 385 }, { "start_pos": 454, "end_pos": 456 }, { "start_pos": 720, "end_pos": 722 }, { "start_pos": 733, "end_pos": 735 }, { "start_pos": 970, "end_pos": 972 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SA52-1", "uniprot_ac": "F1SA52", "uniprot_id": "F1SA52_PIG", "mass": { "chemical_mass": 85010.0, "monoisotopic_mass": 85010.0 }, "refseq": { "ac": "XP_003123210", "name": "KN motif and ankyrin repeat domain-containing protein 3 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123210" }, "gene_names": [ { "name": "KANK3", "type": "recommended", "evidence": [ { "id": "F1SA52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA52" } ] }, { "name": "KANK3", "type": "synonym", "evidence": [ { "id": "XP_003123210", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123210" } ] } ], "protein_names": [ { "name": "KN motif and ankyrin repeat domain-containing protein 3 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003123210", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123210" } ] }, { "name": "KN motif and ankyrin repeat domains 3", "type": "synonym", "evidence": [ { "id": "F1SA52", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA52/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SA52", "url": "https://www.uniprot.org/uniprotkb/F1SA52" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KANK3", "url": "https://www.uniprot.org/uniprotkb/F1SA52", "locus": { "chromosome": "2", "start_pos": 70953543, "end_pos": 70938787, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013598", "url": "https://www.ensembl.org/id/ENSSSCG00000013598" } ] } } ], "crossref": [ { "id": "F1SA52", "url": "https://alphafold.ebi.ac.uk/entry/F1SA52", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013598", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013598", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513584", "url": "https://www.ncbi.nlm.nih.gov/gene/100513584", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021939", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021939", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047184", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047184", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513584", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513584", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SDAWVTE", "url": "https://omabrowser.org/oma/group/SDAWVTE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BGK1", "url": "https://www.orthodb.org/?gene=A0A287BGK1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SA52", "url": "https://www.orthodb.org/?gene=F1SA52", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24168", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24168", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24168:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24168:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12075", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12075", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003123210", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003123210", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BGK1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGK1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BGK1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BGK1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA52", "url": "https://www.uniprot.org/uniprotkb/F1SA52", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA52-1", "url": "https://www.uniprot.org/uniprotkb/F1SA52-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKFALNQNLPDLGGPRLCPGETGGARSPSSPYSVETPYGFHLDLDFLKYVEELERGPTARRVPGPPPARRPRAPRGGLAGARSPGAWTSSESLASDDGGPSGALSPGAPSGLQLTPLSPRAPVRNPRVEHTLLETSRRLELAQAHAHEGAPSLARAVPRSPLGSGHSSPALNPALASPGPAQLQLVREQMAAALRRLRELEDQARALPALQEQVRALRAEKARLLAARRQPEPDGEAEARPDKLAQLRRLTERLATSERGVRARASPGAEDPDGSASRRSEGALQVLDGAPQMREEGTQTVRETQEAGAQVVWETQETGVEAVPETLEAEAWVTEALLGLPVATERELELLRASLEHQREVSELLRGRLCELEEAREAAEEAEAAAAAARPQPHEAATQTPWACVEKATQTDVPVEVHAPMQENPPGPTDGDRAVAPAGTLKSIMKRKDGTPGAQTSPGPKSLQFVGVLNGEYESSSSEGDSGSEDGATEPQRSSSSSSGDDSGGGSDSGTPGPPSGEEARDPEPEAEPEPQPVAQGRCELSPRLREACAALHRHLTRPRGGARDGGAARLVAQEWFRVSSQRRSQSEPVAQVLGAVARMGPELLEHVVNLADGNGNTALHYSVSHGNLAIASLLLDTGVCKIDHQNRAGYSAVMLAALTSVGREEDMAVVQRLFRMGNVNAKASQTGQTALMLAISHGRQDMVAALLACGADVNAQDADGATALMCASEYGRLDTVRMLLAQPGCDPALLDNEGTSALAIALEAEQDEVAALLHAHLSSSQPSPLLSPDSPMAMPGEEGGSDTGEDP", "length": 809, "header": "tr|F1SA52-1|F1SA52_PIG Isoform 1 of KN motif and ankyrin repeat domains 3 OS=Sus scrofa OX=9823 GN=KANK3 PE=1 SV=1 CANONICAL=F1SA52-1" }, "isoforms": [ { "isoform_ac": "A0A287BGK1-1", "url": "https://www.uniprot.org/uniprotkb/F1SA52/entry#A0A287BGK1-1", "sequence": { "sequence": "MVWCRWSPAGMPLDGVGLGRETRSVCPVSPGLPHLTPLHAPVMPTDLGGPRLCPGETGGARSPSSPYSVETPYGFHLDLDFLKYVEELERGPTARRVPGPPPARRPRAPRGGLAGARSPGAWTSSESLASDDGGPSGALSPGAPSGLQLTPLSPRAPVRNPRVEHTLLETSRRLELAQAHAHEGAPSLARAVPRSPLGSGHSSPALNPALASPGPAQLQLVREQMAAALRRLRELEDQARALPALQEQVRALRAEKARLLAARRQPEPDGEAEARPDKLAQLRRLTERLATSERGVRARASPGAEDPDGSASRRSEGALQVLDGAPQMREEGTQTVRETQEAGAQVVWETQETGVEAVPETLEAEAWVTEALLGLPVATERELELLRASLEHQREVSELLRGRLCELEEAREAAEEAEAAAAAARPQPHEAATQTPWACVEKATQTDVPVEVHAPMQENPPGPTDGDRAVAPAGTLKSIMKRKDGTPGAQTSPGPKSLQFVGVLNGEYESSSSEGDSGSEDGATEPQRSSSSSSGDDSGGGSDSGTPGPPSGEEARDPEPEAEPEPQPVAQGRCELSPRLREACAALHRHLTRPRGGARDGGAARLVAQEWFRVSSQRRSQSEPVAQVLGAVARMGPELLEHVVNLADGNGNTALHYSVSHGNLAIASLLLDTGVCKIDHQNRAGYSAVMLAALTSVGREEDMAVVQRLFRMGNVNAKASQTGQTALMLAISHGRQDMVAALLACGADVNAQDADGATALMCASEYGRLDTVRMLLAQPGCDPALLDNEGTSALAIALEAEQDEVAALLHAHLSSSQPSPLLSPDSPMAMPGEEGGSDTGEDP", "length": 843, "header": "tr|A0A287BGK1-1|A0A287BGK1_PIG Computationally mapped isoform of KN motif and ankyrin repeat domains 3 OS=Sus scrofa OX=9823 GN=KANK3 PE=1 SV=1 CANONICAL=F1SA52-1" }, "locus": { "chromosome": "2", "start_pos": 70953331, "end_pos": 70943771, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051764.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051764.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055716.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055716.1" } ] } }, { "isoform_ac": "F1SA52-1", "url": "https://www.uniprot.org/uniprotkb/F1SA52/entry#F1SA52-1", "sequence": { "sequence": "MAKFALNQNLPDLGGPRLCPGETGGARSPSSPYSVETPYGFHLDLDFLKYVEELERGPTARRVPGPPPARRPRAPRGGLAGARSPGAWTSSESLASDDGGPSGALSPGAPSGLQLTPLSPRAPVRNPRVEHTLLETSRRLELAQAHAHEGAPSLARAVPRSPLGSGHSSPALNPALASPGPAQLQLVREQMAAALRRLRELEDQARALPALQEQVRALRAEKARLLAARRQPEPDGEAEARPDKLAQLRRLTERLATSERGVRARASPGAEDPDGSASRRSEGALQVLDGAPQMREEGTQTVRETQEAGAQVVWETQETGVEAVPETLEAEAWVTEALLGLPVATERELELLRASLEHQREVSELLRGRLCELEEAREAAEEAEAAAAAARPQPHEAATQTPWACVEKATQTDVPVEVHAPMQENPPGPTDGDRAVAPAGTLKSIMKRKDGTPGAQTSPGPKSLQFVGVLNGEYESSSSEGDSGSEDGATEPQRSSSSSSGDDSGGGSDSGTPGPPSGEEARDPEPEAEPEPQPVAQGRCELSPRLREACAALHRHLTRPRGGARDGGAARLVAQEWFRVSSQRRSQSEPVAQVLGAVARMGPELLEHVVNLADGNGNTALHYSVSHGNLAIASLLLDTGVCKIDHQNRAGYSAVMLAALTSVGREEDMAVVQRLFRMGNVNAKASQTGQTALMLAISHGRQDMVAALLACGADVNAQDADGATALMCASEYGRLDTVRMLLAQPGCDPALLDNEGTSALAIALEAEQDEVAALLHAHLSSSQPSPLLSPDSPMAMPGEEGGSDTGEDP", "length": 809, "header": "tr|F1SA52-1|F1SA52_PIG Isoform 1 of KN motif and ankyrin repeat domains 3 OS=Sus scrofa OX=9823 GN=KANK3 PE=1 SV=1 CANONICAL=F1SA52-1" }, "locus": { "chromosome": "2", "start_pos": 70953331, "end_pos": 70943070, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014852.4", "url": "https://www.ensembl.org/id/ENSSSCT00000014852.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014451.2", "url": "https://www.ensembl.org/id/ENSSSCP00000014451.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 430, "start_aa": "Thr", "end_pos": 430, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr430", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 512, "start_aa": "Thr", "end_pos": 512, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr512", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA52", "url": "https://www.uniprot.org/uniprotkb/F1SA52" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513584", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513584", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F7FCJ4-1", "protein_name": "KN motif and ankyrin repeat domains 3", "gene_name": "Kank3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKFVLNQNLPDLGGPSLYPGPTGSARSPSSPYSVETPYGFHLDLDFLKYVEEIERGPASRRAPGPPHARRPRASGKGLAGARSPGAWTSSESLASDDGGASGALSPGAFPGLSLPPLSPRSFSRNPRVEHTLLETSRRLEQAQAQERALSPARAATRSPRGSGRSSPAPNPALASPSPVLASPGPAQLQLVREQMAVALRRLRELEDQARALPELQEQVRALRAEKARLLAGRVQPEQDVEIEVRPDKLSQLRRLTERLATSDRGVRSRASPRAEDPDGLAARRSEGALQVLDPASRTPDGEPQTREAGTEVVPETREVDAQAVPETREAGVEVVPETVEVDTWVTEALLGLPEAAERELELLRTSLEHQRGVSELLRGRLRELEEAHEAIVTRSQSREVATQTTLGYTEKTTQTELPVESQPRPTAGDEMAPAGILKSIMKKKDGTPGAQSSQGPKSLQFVGVLNGEYESSSSEDASNSDDEDDVAELPRSSSSGSGDDSSGGSDAGTPGPHNDQDAGDCELEMHPEQKTGREGRCELNPRLREACIALNQQLMRPRGVTSRDALMPTLSWSCQNAARLVAQEWFRVSSQKRCQAEPVAGVLRGVKSLGPELLAHVVNLADGNGNTALHYSVSHGNLAISSLLLDTGVCDVNHQNRAGYSALMLAALTSVGKEEEDMAVVQRLFSMGDVNAKASQTGQTALMLAISHGHQDMVAALLECGADVNVQDADGATALMCASEYGRLDTVQLLLAQPGCDLTILDNEGTSALAIALEAEQDEVAALLHAHLTSNHHDSQEQSTPGSPTATLQRDTGPQPL", "length": 818 }, "evidence": [ { "id": "F1SA52", "url": "https://omabrowser.org/oma/group/F1SA52/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6NY19-2", "protein_name": "KN motif and ankyrin repeat domain-containing protein 3", "gene_name": "KANK3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKFALNQNLPDLGGPRLCPVPAAGGARSPSSPYSVETPYGFHLDLDFLKYIEELERGPAARRAPGPPTSRRPRAPRPGLAGARSPGAWTSSESLASDDGGAPGILSQGAPSGLLMQPLSPRAPVRNPRVEHTLRETSRRLELAQTHERAPSPGRGVPRSPRGSGRSSPAPNLAPASPGPAQLQLVREQMAAALRRLRELEDQARTLPELQEQVRALRAEKARLLAGRAQPEPDGEAETRPDKLAQLRRLTERLATSERGGRARASPRADSPDGLAAGRSEGALQVLDGEVGSLDGTPQTREVAAEAVPETREAGAQAVPETREAGVEAAPETVEADAWVTEALLGLPAAAERELELLRASLEHQRGVSELLRGRLRELEEAREAAEEAAAGARAQLREATTQTPWSCAEKAAQTESPAEAPSLTQESSPGSMDGDRAVAPAGILKSIMKKRDGTPGAQPSSGPKSLQFVGVLNGEYESSSSEDASDSDGDSENGGAEPPGSSSGSGDDSGGGSDSGTPGPPSGGDIRDPEPEAEAEPQQVAQGRCELSPRLREACVALQRQLSRPRGVASDGGAVRLVAQEWFRVSSQRRSQAEPVARMLEGVRRLGPELLAHVVNLADGNGNTALHYSVSHGNLAIASLLLDTGACEVNRQNRAGYSALMLAALTSVRQEEEDMAVVQRLFCMGDVNAKASQTGQTALMLAISHGRQDMVATLLACGADVNAQDADGATALMCASEYGRLDTVRLLLTQPGCDPAILDNEGTSALAIALEAEQDEVAALLHAHLSSGQPDTQSESPPGSQTATPGEGECGDNGENPQVQ", "length": 821 }, "evidence": [ { "id": "F1SA52", "url": "https://omabrowser.org/oma/group/F1SA52/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1P7-1", "protein_name": "KN motif and ankyrin repeat domain-containing protein 3", "gene_name": "Kank3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKFVLNQNLPDLGGPPLYPGPTGSARSPSSPYSVETPYGFHLDLDFLKYVEEIERGPASRRTPGPPHARRPRASRTGLAGARSPGAWTSSESLASDDGGASGALSPGAFPGLSLPPLSPRSLSRNPRVEHTLLETSRRLEQAQARERALSPARAVTRSPRGSGRSSPAPNPALASPGPAQLQLVREQMAAALRRLRELEDQARALPELQEQVRALRAEKARLLAGRVQPEQEVEIEARPDKLAQLRRLTERLATSDRGVRSRASPRAEDPDGLAARRSEGALQVLDPGSRTPDGEPRTRETGTEVVPETREVDAQAVPETGEAGVEVVPETVEVDTWVTEELLGLPEAAERELELLRTSLEHQRGVSELLRGRLRELEEAHEAAVTRPQSRDVAAQTTLGCTEKTTQTELPVENQPRPTAGDEMAPVGILKSIMKKKDGIPGAQSSQGPKSLQFVGVLNGEYESSSSEDGNSDDEDGVAEHPRSSSSGSDDSSGGSDAGTPGPHNDKDAGDCELETHPELTAGREGRCELNPRLREACIALNQQLNRPRGVTSRDGNAARLVAQEWFRVSSQKRSQAESVAGVLRGVKSLGPELLAYVVNLADGNGNTALHYSVSHGNLAISSLLLDTGVCDVNHQNRAGYSALMLAALTSVGQEEEDMAVAQRLFSMGDVNAKASQTGQTALMLAISHGHQDMVAALLECGADVNVQDADGATALMCASEYGRLDTVQLLLAQPGCDLTILDNEGTSALAIALEAEQDEVAALLHAHLTSNHQGQSSTGSPTAKECNDK", "length": 791 }, "evidence": [ { "id": "F1SA52", "url": "https://omabrowser.org/oma/group/F1SA52/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SA52", "url": "https://www.uniprot.org/uniprotkb/F1SA52" } ], "pmid": "" }, { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "F1SA52", "url": "https://www.uniprot.org/uniprotkb/F1SA52" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of actin filament polymerization", "id": "GO:0030837", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030837", "evidence": [ { "database": "UniProtKB", "id": "F1SA52", "url": "https://www.uniprot.org/uniprotkb/F1SA52" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SA52-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 809, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SA52-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SA52" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 430, 512 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SA76-1", "uniprot_ac": "F1SA76", "uniprot_id": "F1SA76_PIG", "mass": { "chemical_mass": 49498.0, "monoisotopic_mass": 49498.0 }, "refseq": { "ac": "XP_001924900", "name": "repulsive guidance molecule A isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001924900" }, "gene_names": [ { "name": "RGMA", "type": "recommended", "evidence": [ { "id": "F1SA76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA76" } ] }, { "name": "RGMA", "type": "synonym", "evidence": [ { "id": "XP_001924900", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001924900" } ] } ], "protein_names": [ { "name": "Repulsive guidance molecule BMP co-receptor a", "type": "synonym", "evidence": [ { "id": "F1SA76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA76/entry#names_and_taxonomy" } ] }, { "name": "repulsive guidance molecule A isoform X2", "type": "synonym", "evidence": [ { "id": "XP_001924900", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001924900" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SA76", "url": "https://www.uniprot.org/uniprotkb/F1SA76" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RGMA", "url": "https://www.uniprot.org/uniprotkb/F1SA76", "locus": { "chromosome": "7", "start_pos": 85968888, "end_pos": 85921594, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002267", "url": "https://www.ensembl.org/id/ENSSSCG00000002267" } ] } } ], "crossref": [ { "id": "ENSSSCG00000002267", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002267", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156429", "url": "https://www.ncbi.nlm.nih.gov/gene/100156429", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR010536", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010536", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040287", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040287", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156429", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156429", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LCWLCLL", "url": "https://omabrowser.org/oma/group/LCWLCLL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BPV6", "url": "https://www.orthodb.org/?gene=A0A287BPV6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SA76", "url": "https://www.orthodb.org/?gene=F1SA76", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31428", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31428", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31428:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31428:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06534", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06534", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF06535", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06535", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001924900", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001924900", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BPV6", "url": "https://www.uniprot.org/uniprotkb/A0A287BPV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BPV6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BPV6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA76", "url": "https://www.uniprot.org/uniprotkb/F1SA76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA76-1", "url": "https://www.uniprot.org/uniprotkb/F1SA76-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSATAGSHAPAPDDTPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPHLRTLPPPGDSQERSDSPEICHYEKSFHNRAAAPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPAAFADGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRGSAEGPGTRRPAAASPAPSAPDTFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTREPPGRAAAAGLPLAPRPLLGSLLLLPLLLVLLEAA", "length": 453, "header": "tr|F1SA76-1|F1SA76_PIG Isoform 1 of Repulsive guidance molecule BMP co-receptor a OS=Sus scrofa OX=9823 GN=RGMA PE=3 SV=3 CANONICAL=F1SA76-1" }, "isoforms": [ { "isoform_ac": "A0A287BPV6-1", "url": "https://www.uniprot.org/uniprotkb/F1SA76/entry#A0A287BPV6-1", "sequence": { "sequence": "MHVKLLQGERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSATAGSHAPAPDDTPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPHLRTLPPPGDSQERSDSPEICHYEKSFHNRAAAPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPAAFADGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRGSAEGPGTRRPAAASPAPSAPDTFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTREPPGRAAAAGLPLAPRPLLGSLLLLPLLLVLLEAA", "length": 456, "header": "tr|A0A287BPV6-1|A0A287BPV6_PIG Computationally mapped isoform of Repulsive guidance molecule BMP co-receptor a OS=Sus scrofa OX=9823 GN=RGMA PE=3 SV=1 CANONICAL=F1SA76-1" }, "locus": { "chromosome": "7", "start_pos": 85967183, "end_pos": 85935056, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060872.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060872.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058136.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058136.1" } ] } }, { "isoform_ac": "F1SA76-1", "url": "https://www.uniprot.org/uniprotkb/F1SA76/entry#F1SA76-1", "sequence": { "sequence": "MQPPRERLVVTGRAGWMGMGRGAGRSALGFWPTLAFLLCSFPAATSPCKILKCNSEFWSATAGSHAPAPDDTPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPHLRTLPPPGDSQERSDSPEICHYEKSFHNRAAAPNYTHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPAAFADGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRGSAEGPGTRRPAAASPAPSAPDTFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYERTREPPGRAAAAGLPLAPRPLLGSLLLLPLLLVLLEAA", "length": 453, "header": "tr|F1SA76-1|F1SA76_PIG Isoform 1 of Repulsive guidance molecule BMP co-receptor a OS=Sus scrofa OX=9823 GN=RGMA PE=3 SV=3 CANONICAL=F1SA76-1" }, "locus": { "chromosome": "7", "start_pos": 85967183, "end_pos": 85921887, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002525.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002525.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002462.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002462.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA76", "url": "https://www.uniprot.org/uniprotkb/F1SA76" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156429", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156429", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A188-1", "protein_name": "Repulsive guidance molecule BMP co-receptor a", "gene_name": "Rgma", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQPPRERLVVTGRAGWMGMGRGAGRSALGLWPTLAFLLCSFPAAISPCKILKCNSEFWSATSSGSHAPASDDVPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPRVRTLPPAGDSQERSDSPEICHYEKSFHKHSAAPNYTHCGLFGDPHLRTFTDHFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPSAFADGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRANAESPRRPAAASPSPVVPETFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDGKMLHSNKDKLHLFERTRELPGAVAAAAFPLAPEMLPGTVTLLVLLPLFW", "length": 449 }, "evidence": [ { "id": "F1SA76", "url": "https://omabrowser.org/oma/group/F1SA76/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BFA9-1", "protein_name": "Repulsive guidance molecule BMP co-receptor a", "gene_name": "RGMA", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQPPRERLVVTGRAGWMGMGRGAGRPALGFWPTLAFLLCSFPAASSSCKILKCNSEFWSATAGSHAPAADDAPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHSCSKDGPTSQPHLRTLPPPGDSQERSDSPEICHYEKSFHNRAAAPNYRHCGLFGDPHLRTFTDRFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPAAFADGSKNGGEKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRAGAAEGPGAPQPPAASPAPPAPDTFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDVKMLHSNKDKLHLYARTREPPGRAGAAPGPPPAPWPLLGTLLLLALLPALLGAA", "length": 455 }, "evidence": [ { "id": "F1SA76", "url": "https://omabrowser.org/oma/group/F1SA76/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q1LVM8-1", "protein_name": "Repulsive guidance molecule A", "gene_name": "rgma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MHSKRERRGALSRAGWMVMGKGAGPSALQVCQFLALFLSLFPAATLQCKILKCNSEFWASTSSSGPEEEFCTALRAYNSCVRRTARTCRGDLAYHSAQHGIEDLMSQHNCSKEGPTTQPRARTVPPPVLSPPQTDIHIPSDEPEVCHYERSLPHNAAPPNYTHCGFFGDPHLRTFNDDFQTCKVEGAWPLIHNKYLSVQVTNTPVVVGSSATATSKLTIIFNSFQECVDQKTYRAETEDLPAAFIDGSKNGGEGHGANTLRVVEKVPGQHVEIQARYIGTTIVVRKVGHYLTFAVRMPEEVVNSVEDQDNQDLYLCLHGCPANQRIDFRTFKARAAESHGVGRGRPGNPSHGFTYQSAMAKCKERLPVEDLYFQSCVFDLLSSGDINFTLAAYYAFEDVKMLHSNKNKYHLFEKDTIFNSASRKLAFSVLIFISFVIVQLWTDSCFICL", "length": 449 }, "evidence": [ { "id": "F1SA76", "url": "https://omabrowser.org/oma/group/F1SA76/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6PCX7-1", "protein_name": "Repulsive guidance molecule A", "gene_name": "Rgma", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQPPRERLVVTGRAGWMGMGRGAGRSALGLWPTLAFLLCSFPAAISPCKILKCNSEFWSATSSGSHAPASDDVPEFCAALRTYALCTRRTARTCRGDLAYHSAVHGIEDLMSQHNCSKDGPTSQPRVRTLPPAGDSQERSDSPEICHYEKSFHKHSAAPNYTHCGLFGDPHLRTFTDHFQTCKVQGAWPLIDNNYLNVQVTNTPVLPGSAATATSKLTIIFKNFQECVDQKVYQAEMDELPSAFADGSKNGGDKHGANSLKITEKVSGQHVEIQAKYIGTTIVVRQVGRYLTFAVRMPEEVVNAVEDRDSQGLYLCLRGCPLNQQIDFQAFRANAESPRRPAAASPSPVVPETFPYETAVAKCKEKLPVEDLYYQACVFDLLTTGDVNFTLAAYYALEDGKMLHSNKDKLHLFERTRELPGAVAAAAAAATTFPLAPQILLGTIPLLVLLPVLW", "length": 454 }, "evidence": [ { "id": "F1SA76", "url": "https://omabrowser.org/oma/group/F1SA76/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96B86-1", "protein_name": "Repulsive guidance molecule A", "gene_name": "RGMA", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Repulsive guidance molecule C-terminal", "eco_id": "ECO_0000259", "start_pos": 159, "end_pos": 406, "start_aa": "Asn", "end_aa": "Ser", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SA76", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SA76" }, { "id": "PF06535", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06535" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Repulsive guidance molecule N-terminal", "eco_id": "ECO_0000259", "start_pos": 48, "end_pos": 117, "start_aa": "Cys", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 114, "end_pos": 116 }, { "start_pos": 159, "end_pos": 161 }, { "start_pos": 389, "end_pos": 391 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SCQ7-1", "uniprot_ac": "F1SCQ7", "uniprot_id": "F1SCQ7_PIG", "mass": { "chemical_mass": 61014.0, "monoisotopic_mass": 61014.0 }, "refseq": {}, "gene_names": [ { "name": "ZFP69", "type": "recommended", "evidence": [ { "id": "F1SCQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ] } ], "protein_names": [ { "name": "Zinc finger protein 69 homolog", "type": "recommended", "evidence": [ { "id": "F1SCQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7/entry#names_and_taxonomy" } ] }, { "name": "Zinc finger protein 642", "type": "synonym", "evidence": [ { "id": "F1SCQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" } ] }, { "annotation": "Putative transcription factor that appears to regulate lipid metabolism.", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7#function" }, { "database": "UniProtKB", "id": "ARBA00059194", "url": "https://www.uniprot.org/uniprotkb/ARBA00059194#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZFP69", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7", "locus": { "chromosome": "6", "start_pos": 170660884, "end_pos": 170675879, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000063595", "url": "https://www.ensembl.org/id/ENSSSCG00000063595" } ] } } ], "crossref": [ { "id": "ENSSSCG00000003981", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003981", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003309", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003309", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "F1SCQ7", "url": "https://www.orthodb.org/?gene=F1SCQ7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SCQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLQQLLITLPAEASTWVKLCHPEKATEGAPLWEDVTKMLEGEALLSQDANETQGKSLKVEVTPRDPTAEPQEQLTFRDVSVDFTQEEWGQLAPAHRHLYREVMLENYGNLVSVARYQLSKPSVISQLEKGEEPWMTEKEGPGDPSSGLTSKTETSVSTAENDIVQEQLYHSMMMERLMRDDVIYSTLREVSKYDYELERQQDSCGRDMRQTIWTHKKRGQETSKFGRSITSSNIVIEQRHHKCDMPKKRNKYKSNLINHPMSYIRTKTYECNICEKVFKQPIHLTEHMRIHTGEKPFRCKECGRAFSQSASLNTHQRIHTGEKPFECEECGKAFRHRSSLNQHHRTHTGEKPYVCDKCQKAFSQNISLIQHLRTHSGEKPFTCNECGKTFRQIRHLSEHVRIHTGEKPYACTACCKTFSHRAYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECKRCGKAYRHDSSFKKHQRHHTGEKPYECNECGKAFSYNSSLTRHHEIHRRNAFQDNM", "length": 524, "header": "tr|F1SCQ7-1|F1SCQ7_PIG Isoform 1 of Zinc finger protein 69 homolog OS=Sus scrofa OX=9823 GN=ZFP69 PE=3 SV=2 CANONICAL=F1SCQ7-1" }, "isoforms": [ { "isoform_ac": "F1SCQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7/entry#F1SCQ7-1", "sequence": { "sequence": "MLQQLLITLPAEASTWVKLCHPEKATEGAPLWEDVTKMLEGEALLSQDANETQGKSLKVEVTPRDPTAEPQEQLTFRDVSVDFTQEEWGQLAPAHRHLYREVMLENYGNLVSVARYQLSKPSVISQLEKGEEPWMTEKEGPGDPSSGLTSKTETSVSTAENDIVQEQLYHSMMMERLMRDDVIYSTLREVSKYDYELERQQDSCGRDMRQTIWTHKKRGQETSKFGRSITSSNIVIEQRHHKCDMPKKRNKYKSNLINHPMSYIRTKTYECNICEKVFKQPIHLTEHMRIHTGEKPFRCKECGRAFSQSASLNTHQRIHTGEKPFECEECGKAFRHRSSLNQHHRTHTGEKPYVCDKCQKAFSQNISLIQHLRTHSGEKPFTCNECGKTFRQIRHLSEHVRIHTGEKPYACTACCKTFSHRAYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECKRCGKAYRHDSSFKKHQRHHTGEKPYECNECGKAFSYNSSLTRHHEIHRRNAFQDNM", "length": 524, "header": "tr|F1SCQ7-1|F1SCQ7_PIG Isoform 1 of Zinc finger protein 69 homolog OS=Sus scrofa OX=9823 GN=ZFP69 PE=3 SV=2 CANONICAL=F1SCQ7-1" }, "locus": { "chromosome": "6", "start_pos": 170675529, "end_pos": 170661103, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004403.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004403.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004302.2", "url": "https://www.ensembl.org/id/ENSSSCP00000004302.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "pmid": "" }, { "name": "lipid metabolic process", "id": "GO:0006629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006629", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "pmid": "" }, { "name": "regulation of lipid metabolic process", "id": "GO:0019216", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019216", "evidence": [ { "database": "UniProtKB", "id": "F1SCQ7", "url": "https://www.uniprot.org/uniprotkb/F1SCQ7" } ], "pmid": "" } ] } ] }, 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12959:SF11", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12959:SF11", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04113", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04113", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-162791", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162791", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R301", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R301", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R301-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R301-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R561", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R561", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R561-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R561-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5K6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5K6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5K6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5K6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5R5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5R5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5R5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5R5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8I9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8I9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8I9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8I9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RJW9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RJW9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RJW9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RJW9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD35", "url": "https://www.uniprot.org/uniprotkb/F1SD35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SD35-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPEVTSPTLFLLEAGHPRGRDYWEAEAAAGMAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFIQAPSGAELWVWFQDTVTDVDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGLANGTDHSFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHMRPVCRNARCTSVSWELRQTLSVVFDAFVTGQGKKDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENEAPPVPFLHAQRYVSGYGLQNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 609, "header": "tr|F1SD35-1|F1SD35_PIG Isoform 1 of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=1 SV=4 CANONICAL=F1SD35-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R301-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35/entry#A0A5G2R301-1", "sequence": { "sequence": "MAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFIQAPSGAELWVWFQDTVTELPTRLIEEKRCLGQEAAATQSFPRRALLRGRTVAAREEAGVERAGRLPGRGGLPWSVDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGLANGTDHSFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHMRPVCRNARCTSVSWELRQTLSVVFDAFVTGQGKKDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENEAPPVPFLHAQRYVSGYGLQNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 634, "header": "tr|A0A5G2R301-1|A0A5G2R301_PIG Computationally mapped isoform of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=1 SV=1 CANONICAL=F1SD35-1" }, "locus": { "chromosome": "17", "start_pos": 47749660, "end_pos": 47735380, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083703.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083703.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071567.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071567.1" } ] } }, { "isoform_ac": "A0A5G2R561-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35/entry#A0A5G2R561-1", "sequence": { "sequence": "MAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFIQAPSVCHLYLRPKDWSNWEALNRVLLKDPRTAPSVDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGLANGTDHSFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHMRPVCRNARCTSVSWELRQTLSVVFDAFVTGQGKKDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENEAPPVPFLHAQRYVSGYGLQNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 594, "header": "tr|A0A5G2R561-1|A0A5G2R561_PIG Computationally mapped isoform of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=1 SV=1 CANONICAL=F1SD35-1" }, "locus": { "chromosome": "17", "start_pos": 47749660, "end_pos": 47735380, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091346.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091346.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069310.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069310.1" } ] } }, { "isoform_ac": "A0A5G2R5K6-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35/entry#A0A5G2R5K6-1", "sequence": { "sequence": "MAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENEAPPVPFLHAQRYVSGYGLQNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 384, "header": "tr|A0A5G2R5K6-1|A0A5G2R5K6_PIG Computationally mapped isoform of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=1 SV=1 CANONICAL=F1SD35-1" }, "locus": { "chromosome": "17", "start_pos": 47749660, "end_pos": 47735380, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067605.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067605.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065870.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065870.1" } ] } }, { "isoform_ac": "A0A5G2R5R5-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35/entry#A0A5G2R5R5-1", "sequence": { "sequence": "MAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEGTDHSFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHMRPVCRNARCTSVSWELRQTLSVVFDAFVTGQGKKDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENEAPPVPFLHAQRYVSGYGLQNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 476, "header": "tr|A0A5G2R5R5-1|A0A5G2R5R5_PIG Computationally mapped isoform of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=1 SV=1 CANONICAL=F1SD35-1" }, "locus": { "chromosome": "17", "start_pos": 47749660, "end_pos": 47735380, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075364.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075364.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071665.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071665.1" } ] } }, { "isoform_ac": "A0A5G2R8I9-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35/entry#A0A5G2R8I9-1", "sequence": { "sequence": "MAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFIQAPSGTDHSFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHMRPVCRNARCTSVSWELRQTLSVVFDAFVTGQGKKDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENEAPPVPFLHAQRYVSGYGLQNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 522, "header": "tr|A0A5G2R8I9-1|A0A5G2R8I9_PIG Computationally mapped isoform of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=1 SV=1 CANONICAL=F1SD35-1" }, "locus": { "chromosome": "17", "start_pos": 47749660, "end_pos": 47735380, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085844.2", "url": "https://www.ensembl.org/id/ENSSSCT00000085844.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072628.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072628.1" } ] } }, { "isoform_ac": "A0A5G2RJW9-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35/entry#A0A5G2RJW9-1", "sequence": { "sequence": "MAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFIQAPSGAELWVWFQDTVTDVDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGLANGTDHSFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHMRPVCRNARCTSVSWELRQTLSVVFDAFVTGQGKKDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENGYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 511, "header": "tr|A0A5G2RJW9-1|A0A5G2RJW9_PIG Computationally mapped isoform of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=4 SV=1 CANONICAL=F1SD35-1" }, "locus": { "chromosome": "17", "start_pos": 47749660, "end_pos": 47735380, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083444.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083444.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072260.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072260.1" } ] } }, { "isoform_ac": "F1SD35-1", "url": "https://www.uniprot.org/uniprotkb/F1SD35/entry#F1SD35-1", "sequence": { "sequence": "MAPEVTSPTLFLLEAGHPRGRDYWEAEAAAGMAAAVPLFLSVLLLLGPGSWSQAESPRDSLREELVITPLPSGDVAATFQFRTRWDLDLQREEVSHYRLFPKALGQLISKYSLRELHLSLTQGFWRTRYWGTPFIQAPSGAELWVWFQDTVTDVDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGLANGTDHSFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHMRPVCRNARCTSVSWELRQTLSVVFDAFVTGQGKKDWSLFRMFSRTLTEPCPLAAESRVYVDITSYSQDNETLEVYPLPLTTYQDVILGTRRTYAVYDLLDSAVINNSRSLNLQLKWKRPPENEAPPVPFLHAQRYVSGYGLQNGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPARDRLQPHLLEMLIQLPANSVTKVSIHFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWDESPLFNTLFPVSDGSSHFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 609, "header": "tr|F1SD35-1|F1SD35_PIG Isoform 1 of Phosphatidylinositol glycan anchor biosynthesis class T OS=Sus scrofa OX=9823 GN=PIGT PE=1 SV=4 CANONICAL=F1SD35-1" }, "locus": { "chromosome": "17", "start_pos": 47749660, "end_pos": 47735287, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008097.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008097.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007881.3", "url": "https://www.ensembl.org/id/ENSSSCP00000007881.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 185, "start_aa": "Thr", "end_pos": 185, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr185", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SD35", "url": "https://www.uniprot.org/uniprotkb/F1SD35" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-162791", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-162791", "resource": "Reactome", "description": "Attachment of GPI anchor to uPAR" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6GIH3-1", "protein_name": "Phosphatidylinositol glycan anchor biosynthesis, class T", "gene_name": "Pigt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAMPLGLSLLLLVLVGQGCCGRVEGPRDSLREELVITPLPSGDVAATFQFRTRWDSDLQREGVSHYRLFPKALGQLISKYSLRELHLSFTQGFWRTRYWGPPFLQAPSGAELWVWFQDTVTDVDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGLANDTDHYFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHIRPICRNAHCTSISWELRQTLSVVFDAFITGQGKKDWSLFRMFSRTLTEACPLASQSLVYVDITGYSQDNETLEVSPPPTSTYQDVILGTRKTYAVYDLFDTAMINNSRNLNIQLKWKRPPDNEALPVPFLHAQRYVSGYGLQKGELSTLLYNSHPYRAFPVLLLDAVPWYLRLYVHTLTITSKGKDNKPIGQTPQILHTDGLVESLFPIETSQAISTICIALNILILQAPTEQLSYIHYQPAQDRQQPHLLEMLIQLPANSVTKVSIQFERALLKWTEYTPDPNHGFYVSPSVLSALVPSMVAAKPVDWEESPLFNTLFPVSDGSSYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPKSGGLAKRLANLIRRARGVPPL", "length": 625 }, "evidence": [ { "id": "F1SD35", "url": "https://omabrowser.org/oma/group/F1SD35/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G182-1", "protein_name": "GPI transamidase component PIG-T homolog", "gene_name": "pigT", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGLKFLVVILILSIFVNSNEATKTTKNDDDNSSYATFNETQSFFEELLIKPLPKGKLMTHVQFTTEWNSNFLEKSTFQHYDLFPRSIGDLITRVGIEEFTLVFTQGRWSYSEWGYPVRAAPVGVELIAWMKPLEKGIDAQWRELTHSLSGLFCASMQFLYQVPHHTSSPNRSFRPEGESNIYNYNGGDEDSFSSSSSSSSTTTTTTPAIKLNNGTIVPLELRYGILPRESVCTENLTPWVKLLPCREQSGLGKLLNPHKLYDVHYHSMSITIRKICKNNNNNNNTDNDSSCLSPTLEIVQSLTIVNDLNNNQHQQETIETNLDNLFGLKGNTGLSACPLASRSKIYIQKQPSLNTNLKITNIGANSNNIEQQQQQQQSDSFKNGEKETDNFYIYDLMKYSTNKPLKLKMNWSKNFKRKFETPVVAHSHLTGYGQERGGIATQIFNTENYAINITYFQAIPWYLRLYFHTLKFNIETSGEKSIDNTNRKEDSPFLLYKNISPAETRSSPSTIELSFEMPPNSVASMSIEFDKVFLHYTEHPPDANRGFDLGSGVVTAFIKSSNANEGDAIHLEWSNETYNNNNNNNNNNNNNNRNNDKSSIIPVRIYTEGLLITLPTPDFSMLYNVITLTGTVFALFFGSMINILIRRFKNTFTGNDFVSDRPIAKIYRRILRFIDGK", "length": 677 }, "evidence": [ { "id": "F1SD35", "url": "https://omabrowser.org/oma/group/F1SD35/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "F1P2G6-1", "protein_name": "Phosphatidylinositol glycan anchor biosynthesis class T", "gene_name": "PIGT", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLAVGLVLLLAAGLGQGTTRGVLREELLLRPLPVGDVAAVFQFRTRWDADLQQGAVSHYRLFPKALGQLVAAHGVRELHLALTQGFWSTQSWGQPPLGAPAGAELWVWFQDTVPDVDKAWKELSNILSGIFCASLNFIDSTNTVTPTASFKPLGVANGTDHRLLRYAVLPREVVCTENLTPWKKLLPCGSKAGLAVLLKAERLFHSSYHSQAVHIRPICRDASCLAVSWELRQTLTVVFDSFTSGQGKKDWSLFKMFSRTLTDACPLASESKVYVDISPKNKEKQLLEVTPTPTSVHEAIVQGDKTTYAVYDLLSPVLFNTSRSLNVQLKWKRPEDSSELSTPIMHAQRYVSGYGLQTGEISTLIYNTHPYRAFPVILLETVPWYLRLYVHTLTIITKGKENKPSYMHYQPAQDRKRPHLLEMLIQLPANSATKITIQFERALLKWTEYPPDPNHGFYVSSSVLSALVPSVIAMKDVNVEESPLFTSLFPSSDGSSYFLRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHVEEPSRGGLAKRLANVIRRLRGVPPI", "length": 571 }, "evidence": [ { "id": "F1SD35", "url": "https://omabrowser.org/oma/group/F1SD35/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P38875-1", "protein_name": "GPI transamidase component GPI16", "gene_name": "GPI16", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MILTLAYFMLGTLLLGVFAEDTVSQIGINDSLWYPYDEALVLKPLPNNDLLLSFAFQLQSEPFDPAVSSMSYDAYEHYTTFPRAIPPLLESTATRQFHLRFTRGFWDALSWGQLPHAGKEAGASGVELWSQVQAMDQEQAFHNWKKLSNSLSGLFCSSLNFIDESRTTFPRRSYASDIGAPLFNSTEKLYLMRASLPNEPICTENLTPFIKLLPTRGKSGLTSLLDGHKLFDSLWNSISLDIATICSEDEDALCHYEMDARIEMVTHVPSALARGERPIPKPLDGNTLRCDTDKPFDSYQCFPLPEPSQTHFKLSQLFARPINNGNLFANRPTRICAEVDRSTWTAFLSVDDTIFSTHDNCFDLSNDQNEGGSGYDFILESTDTTKVTPIVPVPIHVSRSLTGNGQDRGGMRIVFHNDNDTPVKLIYFESLPWFMRVYLSSLQITSTTSPQLQENDIILDKYYLQAADRKRPGHLEFTMLIPANTDIVMTYQFDKALLQFAEYPPDANHGFEIDAAVITVLSLESSSSLYEMRTSTLLLSLSTPDFSMPYNVIILTSTIMGLIFGMLYNLMVKRMVTVEEADKITLQSGLKYKLLKLKEKFLGKKKTKTD", "length": 610 }, "evidence": [ { "id": "F1SD35", "url": "https://omabrowser.org/oma/group/F1SD35/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q8BXQ2-1", "protein_name": "GPI-anchor transamidase component PIGT", "gene_name": "Pigt", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAMPLGLPLRLLVLLLVGRGCCGCAEGPRDSLREELVITPLPSGDVAATFQFRTRWDSDLQREGVSHYRLFPKALGQLISKYSLRELHLSFTQGFWRTRYWGPPFLQAPSGAELWVWFQDTVTDVDKSWRELSNVLSGIFCASLNFIDATNTVTPTASFKPLGLANDTDDYFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHIRPICRNAHCTSISWELRQTLSVVFDAFITGQGKKDWSLFRMFSRTLTEACPLASQSLVYVDITGYSQDNETLEVSPPPTSTYQDVILGTRKTYAVYDLFDTAMINNSRNLNIQLKWKRPPDNEALPVPFLHAQRYVSGYGLQKGELSTLLYNSHPYRAFPVLLLDVVPWYLRLYVHTLTITSKGKENKPSYIHYQPAQDRQQPHLLEMLIQLPANSVTKVSIQFERALLKWTEYTPDPNHGFYVSPSVLSALVPSVVAAKPVDWEGSPLFNTLFPVSDGSSYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPKSGGLAKRLANLIRRARGVPPL", "length": 582 }, "evidence": [ { "id": "F1SD35", "url": "https://omabrowser.org/oma/group/F1SD35/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q969N2-1", "protein_name": "GPI-anchor transamidase component PIGT", "gene_name": "PIGT", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAMPLALLVLLLLGPGGWCLAEPPRDSLREELVITPLPSGDVAATFQFRTRWDSELQREGVSHYRLFPKALGQLISKYSLRELHLSFTQGFWRTRYWGPPFLQAPSGAELWVWFQDTVTDVDKSWKELSNVLSGIFCASLNFIDSTNTVTPTASFKPLGLANDTDHYFLRYAVLPREVVCTENLTPWKKLLPCSSKAGLSVLLKADRLFHTSYHSQAVHIRPVCRNARCTSISWELRQTLSVVFDAFITGQGKKDWSLFRMFSRTLTEPCPLASESRVYVDITTYNQDNETLEVHPPPTTTYQDVILGTRKTYAIYDLLDTAMINNSRNLNIQLKWKRPPENEAPPVPFLHAQRYVSGYGLQKGELSTLLYNTHPYRAFPVLLLDTVPWYLRLYVHTLTITSKGKENKPSYIHYQPAQDRLQPHLLEMLIQLPANSVTKVSIQFERALLKWTEYTPDPNHGFYVSPSVLSALVPSMVAAKPVDWEESPLFNSLFPVSDGSNYFVRLYTEPLLVNLPTPDFSMPYNVICLTCTVVAVCYGSFYNLLTRTFHIEEPRTGGLAKRLANLIRRARGVPPL", "length": 578 }, "evidence": [ { "id": "F1SD35", "url": "https://omabrowser.org/oma/group/F1SD35/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W3G0-1", "protein_name": "Phosphatidylinositol glycan anchor biosynthesis class T", "gene_name": "PIG-T", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MYPVAFVLLLLVAPNADANLGRDDERFHEELVVRPLSGDHVNTYFQFTTRWHYGEKDNLYHTQLTPRVIAELLQQFAVKELHIGLTQGLWRYETWGYPIVEATSGAEMWAWFSGANLTNRDVDRQWKELANVFSGVLCASLNFVDNTNSIAPRHLIRPQFMPANGQRFVRYATLPREIVCTENLTPWKKLLPCGSASGFASLLNSGHVHNTKYHSLGLKVRVLCEDHDEDNCIVELTQTANLVYDLRLFELSNNDFSLRRLFGMGLNGYCELAESSKIYVQRNELGERYQLVPEPVHEVKTTRGGHSVVYSVYDMHEQFKEAGERLFNVAWLAPKSANRRRNLAKPSLPPVTVHRYLLGHGQERGRIVTEVTNSHYDALPIMLQEVIPWYVHAYLHTLSIRRKPQRVNEYGGQRLTFKLLHYTPGKQRELPSHLEIGFMLPGQTSALISIDVDYLLLKWLEYPPDANHGHYIGSAIVSSQLPMGRNYTALPPEGHLFEHSFNATRPSYVLSLHTEALIVSLPTPDFSMPYNVICLACTVVALAFGPIHSVATKMIIVGRQTSAPKNFVKKIFNQLFRRGKATDETAAEGEGLPAAGAAATGVASGRAAISPGSPSGDQPLLEDLDEEEEEEQD", "length": 633 }, "evidence": [ { "id": "F1SD35", "url": "https://omabrowser.org/oma/group/F1SD35/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GPI anchor binding", "id": "GO:0034235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034235", "evidence": [ { "database": "UniProtKB", "id": "F1SD35", "url": "https://www.uniprot.org/uniprotkb/F1SD35" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasmic vesicle", "id": "GO:0031410", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031410", "evidence": [ { "database": "UniProtKB", "id": "F1SD35", "url": "https://www.uniprot.org/uniprotkb/F1SD35" } ], "pmid": "" }, { "name": "GPI-anchor transamidase complex", "id": "GO:0042765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042765", "evidence": [ { "database": "UniProtKB", "id": "F1SD35", "url": "https://www.uniprot.org/uniprotkb/F1SD35" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "attachment of GPI anchor to protein", "id": "GO:0016255", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016255", "evidence": [ { "database": "UniProtKB", "id": "F1SD35", "url": "https://www.uniprot.org/uniprotkb/F1SD35" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 195, "end_pos": 197, "annotation": "n_glycosylation_sequon" }, { "start_pos": 216, "end_pos": 218, "annotation": "n_glycosylation_sequon" }, { "start_pos": 322, "end_pos": 324, "annotation": "n_glycosylation_sequon" }, { "start_pos": 358, "end_pos": 360, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 185 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 195, "end_pos": 197 }, { "start_pos": 216, "end_pos": 218 }, { "start_pos": 322, "end_pos": 324 }, { "start_pos": 358, "end_pos": 360 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SBS9-1", "uniprot_ac": "F1SBS9", "uniprot_id": "F1SBS9_PIG", "mass": { "chemical_mass": 86918.0, "monoisotopic_mass": 86918.0 }, "refseq": { "ac": "XP_003480864", "name": "DENN domain-containing protein 1C", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480864" }, "gene_names": [ { "name": "DENND1C", "type": "recommended", "evidence": [ { "id": "F1SBS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ] }, { "name": "DENND1C", "type": "synonym", "evidence": [ { "id": "XP_003480864", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480864" } ] } ], "protein_names": [ { "name": "DENN domain containing 1C", "type": "synonym", "evidence": [ { "id": "F1SBS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBS9/entry#names_and_taxonomy" } ] }, { "name": "DENN domain-containing protein 1C", "type": "synonym", "evidence": [ { "id": "XP_003480864", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480864" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DENND1C", "url": "https://www.uniprot.org/uniprotkb/F1SBS9", "locus": { "chromosome": "2", "start_pos": 72620209, "end_pos": 72610566, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013546", "url": "https://www.ensembl.org/id/ENSSSCG00000013546" } ] } } ], "crossref": [ { "id": "ENSSSCG00000013546", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013546", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100737024", "url": "https://www.ncbi.nlm.nih.gov/gene/100737024", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001194", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001194", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005112", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005112", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005113", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005113", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040032", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040032", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043153", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043153", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737024", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737024", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QQECRTD", "url": "https://omabrowser.org/oma/group/QQECRTD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SBS9", "url": "https://www.orthodb.org/?gene=F1SBS9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13196", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13196", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13196:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13196:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02141", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02141", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03455", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03455", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8876198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003480864", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480864", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BJE9", "url": "https://www.uniprot.org/uniprotkb/A0A287BJE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJE9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJE9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJW7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJW7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJW7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJW7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SBS9-1", "url": "https://www.uniprot.org/uniprotkb/F1SBS9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSTAEGDPPAVFDWFFEAAYPASLQEDPPILRQFPPDFRDREAMQMVPKFCFPFDVEREPPSSAVQHFTFALTDLTGTRRFGFCRLRAGAHSCLCILSHLPWFEVFYKLLNTVGDLLAQDQVSEVEELLLNLLQQPLPGTPGLELGSEVTTSRAHAIPPPAPGKSKPLSCFVAPDSGRLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLISSKLSTLTSCVHASCALLYPMHWEHVLIPTLPPHLLDYCCAPMPYLIGVHASLAERVREKGLEDVVMMNVDSNTLETPFDDVQALPPDVVSLLRLRLRKVALAPGEGVSRLFLKAQALLFGGYRDALVCSPGQPVTFDEKAFLAQKPGAPLQAFHQRAVHLQLFKQFIEGRLEKLNKGEGFSDLFEQEITCSCASSGTLRSYQLWADNLKKGGGALLHSVKAKTQPAVRNMYRSAKSGLKGVQSLLMYKDGDSGLQRGGSLRTPSLTSRSDRLQQRLPITQHFGQNRPLRPSRRLRLEERPSESLGEGTPPLSPGDAQEPWAEEALDGSFLGSGEELDLLSEILDSLSTRATRTSSLRPSQSLDCCHRGDPDSCFSLPDLSGRPRWQADDETPPEPRPLSLPVSPPSLHTPQLLDAGTSSEHPISQLPPEASGEIASPSGPSTASADPSSKGDSVSSLTEPQSLTLHLSPPHKASEDPIAQENPSSQLSTQPHPPESPQRPVPTKPNSDTTWTSQPLDSSSDPGSPENPRAQPSEVLQVEHTHLQPPKELGGPGRPASTWQEPATRSRPRVSELKKCFEA", "length": 797, "header": "tr|F1SBS9-1|F1SBS9_PIG Isoform 1 of DENN domain containing 1C OS=Sus scrofa OX=9823 GN=DENND1C PE=4 SV=3 CANONICAL=F1SBS9-1" }, "isoforms": [ { "isoform_ac": "A0A287BJE9-1", "url": "https://www.uniprot.org/uniprotkb/F1SBS9/entry#A0A287BJE9-1", "sequence": { "sequence": "MGSTAEGDPPAVFDWFFEAAYPASLQEDPPILRQFPPDFRDREAMQMVPKFCFPFDVEREPPSSAVQHFTFALTDLTGTRRFGFCRLRAGAHSCLCILSHLPWFEVFYKLLNTVGDLLAQDQVSEVEELLLNLLQQPLPGTPGLELGSEVTTSRAHAIPPPAPGKSKPLSCFVAPDSGRLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLISSKLSTLTSCVHASCALLYPMHWEHVLIPTLPPHLLDYCCAPMPYLIGVHASLAERVREKGLEDVVMMNVDSNTLETPFDDVQALPPDVGQPVTFDEKAFLAQKPGAPLQAFHQRAVHLQLFKQFIEGRLEKLNKGEGFSDLFEQEITCSCASSGTLRSYQLWADNLKKGGGALLHSVKAKTQPAVRNMYRSAKSGLKGVQSLLMYKDGDSGLQRGGSLRTPSLTSRSDRLQQRLPITQHFGQNRPLRPSRRLRLEERPSESLGEGTPPLSPGDAQEPWAEEALDGSFLGSGEELDLLSEILDSLSTRATRTSSLRPSQSLDCCHRGDPDSCFSLPDLSGRPRWQADDETPPEPRPLSLPVSPPSLHTPQLLDAGTSSEHPISQLPPEASGEIASPSGPSTASADPSSKGDSVSSLTEPQSLTLHLSPPHKASEDPIAQENPSSQLSTQPHPPESPQRPVPTKPNSDTTWTSQPLDSSSDPGSPENPRAQPSEVLQVEHTHLQPPKELGGPGRPASTWQEPATRSRPRVSELKKCFEA", "length": 755, "header": "tr|A0A287BJE9-1|A0A287BJE9_PIG Computationally mapped isoform of DENN domain containing 1C OS=Sus scrofa OX=9823 GN=DENND1C PE=4 SV=3 CANONICAL=F1SBS9-1" }, "locus": { "chromosome": "2", "start_pos": 72620154, "end_pos": 72610675, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041117.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041117.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056196.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056196.3" } ] } }, { "isoform_ac": "A0A5G2QJW7-1", "url": "https://www.uniprot.org/uniprotkb/F1SBS9/entry#A0A5G2QJW7-1", "sequence": { "sequence": "MGSTAEAGLAAYRSSQARSQIRAAAARGDPPAVFDWFFEAAYPASLQEDPPILRQFPPDFRDREAMQMVPKFCFPFDVEREPPSSAVQHFTFALTDLTGTRRFGFCRLRAGAHSCLCILSHLPWFEVFYKLLNTVGDLLAQDQVSEVEELLLNLLQQPLPGTPGLELGSEVTTSRAHAIPPPAPGKSKPLSCFVAPDSGRLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLISSKLSTLTSCVHASCALLYPMHWEHVLIPTLPPHLLDYCCAPMPYLIGVHASLAERVREKGLEDVVMMNVDSNTLETPFDDVQALPPDVVSLLRLRLRKVALAPGEGVSRLFLKAQALLFGGYRDALVCSPGQPVTFDEKAFLAQKPGAPLQAFHQRAVHLQLFKQFIEGRLEKLNKGEGFSDLFEQEITCSCASSGTLRSYQLWADNLKKGGGALLHSVKAKTQPAVRNMYRSAKSGLKGVQSLLMYKDGDSGLQRGGSLRTPSLTSRSDRLQQRLPITQHFGQNRPLRPSRRLRLEERPSESLGEGTPPLSPGDAQEPWAEEALDGSFLGSGEELDLLSEILDSLSTRATRTSSLRPSQSLDCCHRGDPDSCFSLPDLSGRPRWQADDETPPEPRPLSLPVSPPSLHTPQLLDAGTSSEHPISQLPPEASGEIASPSGPSTASADPSSKGDSVSSLTEPQSLTLHLSPPHKASEDPIAQENPSSQLSTQPHPPESPQRPVPTKPNSDTTWTSQPLDSSSDPGSPENPRAQPSEVLQVEHTHLQPPKELGGPGRPASTWQEPATRSRPRVSELKKCFEA", "length": 818, "header": "tr|A0A5G2QJW7-1|A0A5G2QJW7_PIG Computationally mapped isoform of DENN domain containing 1C OS=Sus scrofa OX=9823 GN=DENND1C PE=4 SV=1 CANONICAL=F1SBS9-1" }, "locus": { "chromosome": "2", "start_pos": 72620154, "end_pos": 72610675, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076506.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076506.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062352.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062352.1" } ] } }, { "isoform_ac": "F1SBS9-1", "url": "https://www.uniprot.org/uniprotkb/F1SBS9/entry#F1SBS9-1", "sequence": { "sequence": "MGSTAEGDPPAVFDWFFEAAYPASLQEDPPILRQFPPDFRDREAMQMVPKFCFPFDVEREPPSSAVQHFTFALTDLTGTRRFGFCRLRAGAHSCLCILSHLPWFEVFYKLLNTVGDLLAQDQVSEVEELLLNLLQQPLPGTPGLELGSEVTTSRAHAIPPPAPGKSKPLSCFVAPDSGRLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLISSKLSTLTSCVHASCALLYPMHWEHVLIPTLPPHLLDYCCAPMPYLIGVHASLAERVREKGLEDVVMMNVDSNTLETPFDDVQALPPDVVSLLRLRLRKVALAPGEGVSRLFLKAQALLFGGYRDALVCSPGQPVTFDEKAFLAQKPGAPLQAFHQRAVHLQLFKQFIEGRLEKLNKGEGFSDLFEQEITCSCASSGTLRSYQLWADNLKKGGGALLHSVKAKTQPAVRNMYRSAKSGLKGVQSLLMYKDGDSGLQRGGSLRTPSLTSRSDRLQQRLPITQHFGQNRPLRPSRRLRLEERPSESLGEGTPPLSPGDAQEPWAEEALDGSFLGSGEELDLLSEILDSLSTRATRTSSLRPSQSLDCCHRGDPDSCFSLPDLSGRPRWQADDETPPEPRPLSLPVSPPSLHTPQLLDAGTSSEHPISQLPPEASGEIASPSGPSTASADPSSKGDSVSSLTEPQSLTLHLSPPHKASEDPIAQENPSSQLSTQPHPPESPQRPVPTKPNSDTTWTSQPLDSSSDPGSPENPRAQPSEVLQVEHTHLQPPKELGGPGRPASTWQEPATRSRPRVSELKKCFEA", "length": 797, "header": "tr|F1SBS9-1|F1SBS9_PIG Isoform 1 of DENN domain containing 1C OS=Sus scrofa OX=9823 GN=DENND1C PE=4 SV=3 CANONICAL=F1SBS9-1" }, "locus": { "chromosome": "2", "start_pos": 72620154, "end_pos": 72610675, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014794.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014794.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014393.3", "url": "https://www.ensembl.org/id/ENSSSCP00000014393.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 141, "start_aa": "Thr", "end_pos": 141, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr141", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100737024", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737024", "resource": "KEGG Pathway" }, { "id": "R-SSC-8876198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "resource": "Reactome", "description": "RAB GEFs exchange GTP for GDP on RABs" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M2BFQ0-1", "protein_name": "DENN domain-containing protein 1B isoform X1", "gene_name": "dennd1c", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGSRIKKNPDKTFYWFFQASCPIARDKDPDVLFQFPEDFNDEESRKSLPRFCFPYDIERVKDSVAVQHFTFVLTDLEGCQRFGFCRLTSSSQTCLCILSYLPWFEVFYKLLNNLAECSSKGQTNEMTELLSALYKHPVPPANGSITLQMGAKLMIGSEMPGICGHAPKGEESAGIPYFIAPDPKALPSIPESRNLTELVVAVDVGNLLQLYASMLFERRILIYCSKLSTLTACVHACNGMLFPMYWQHIFIPVLPPHLLDYCCAPMPYLIGIHSSLAERVKSRALEDVVILNIDTNTLESPHEDLKKIPADVVAGLKVRLKRQAAAAGSGVAHAFLRAQALLFGGYRDALQAPADGPVVFCTELFLNHKSPSMREFLESAVHLQCFKEFIDGRLEMLNEGKEPSDVFEEELLQCGASSGGAKLCRQWVGNLKKGGGALIVTWKSTANKATKYHSKFGLKNLLSSKDQPEACTLQRGGSVCEPHTYRLIQSDCLQNRLPITQHFGKSRPRRPAQKHHRQKEQKTPVNNTTYEDSAADAVDQCSGSSDVQEEEEEDFSLLADAEEMDLLGEIFDTLSAQSSREPGLLYGTRSLDLFRSDSSEFISHKGLANPSQESLSPSFANSGSLMSWEEELEEGPDGEGEGPGGGEEEGTVNEEKGTFNEEEESIIMIDGSENELNELEKDLTELGETLRSDLQDLEDASVESSQEVQENTQDYTQMNGTMEESLDTETIAEERTETQTDKEEEELQNETPDASNGHTHEESISLKVKIDQREEPEEKSAEAQLPKVSSTVALFQSKVLVDSPVCRGKENSPKSPLRSLKINVGSAKAMQSEEECTKSPVTSNAEEQEQAPVKVSELKKRFEH", "length": 864 }, "evidence": [ { "id": "F1SBS9", "url": "https://omabrowser.org/oma/group/F1SBS9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E1BFU9-1", "protein_name": "DENN domain containing 1C", "gene_name": "DENND1C", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSTAEGGPPALFDWFFEAAYPASLQEDPPILRQFPPDFQDQESMQMVPKFCFPFDVERETPSTAVQHFTFVLTDLTGTRRFGFCRLRAGALSCLCILSHLPWFEVFYKLLNTVGDLLAQDQVSEVDELLLNLLQQPLPGTQASVGLELGSGVRIASAEGLQSPVPGKNMSLSCFVAPDSSRLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLTSSKLSTLTSCVHASCALLYPMHWEHVLIPTLPPHLLDYCCAPMPYLIGVHASLAERVREKALEDVVILNVDSNTLETPFDDVQALPPDVVSLLRLRLRKVALAPGEGVSRLFLKAQALLFGGYRDALVCSPGQPVTFSEEAFLAQKPGAPLQAFHRRAVHLQLFKQFIEGRLEKLNTGEGFSDLFEQEITCSGASSGTLRSYQLWADNLKKGGGALLHSVKAKTQPAVRNMYRSAKSGLKGMQSLLMYKEGDSGLQRGGSLRAPSLTSRSDRLQQRLPITQHFGQNRPLRPRSRPSRRLRLEEKPSESLEERTPSLSPEDAQDPWAEEALDGSFLGSGEELDLLSEILDSLSTRATRTGSLRPSQSLDCCHREDLDSCLSLPDIPGRSSWQADDDKPPEPQHLSLLPLHTPQPLGATSSRKHPTCQLPSETGPEIESPSQSLTASADPSSKGDPGSSPTEPQPPHFSPPHEATEDPTAQEDPCSQLLAAPSQPSPPESPRPEPNLGVTWTSQALDSVSDPGSSENPGASPSEGLLAVHLQPLEEPEAPRSPAAPASNWQEPQARSGPRVAELKKCFEG", "length": 798 }, "evidence": [ { "id": "F1SBS9", "url": "https://omabrowser.org/oma/group/F1SBS9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "M0RBQ8-1", "protein_name": "DENN domain containing 1C", "gene_name": "Dennd1c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGSTEIRHPSAVFDWFFEAGRPNSLEEDPLILRKFPPDFQEQEAMQMVPRFCFPFDIEREPPSPAVQHFTFALTDLVGNRRFGFCRLRAGAWSCLCILSHLPWFEVFYKILNTVGDLLAQNQVTEAEELLQNLQQHPYLGPGFSGGPKTDSSITSWSECGILPPALGNSKLLSCFVAPDAAGLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLTASKLSTLTACVHASCALLYPMRWEHVLIPTLPPHLLDYCCAPMPYLIGVHSSLAERVREKALEDVVVLNADSNTLETPFDDVQALPPDVVSLLRLRLRKVALSPGEGVSRLFLKAQALLFGGYRDALVCIPGQPVTFSEEAFLAQKPGAPLQAFHKKAVHLQLFKQFIESRLEKLNAGEGFSDQFEQEIIACCGASSGTLRSYQLWADSLKKGSDALLHSVKAKTRPAVRNMYRSAKSGLKGMQNLLMIKDGDSCLQRGGSLRTPSLTSRSDRLQQRLPISQHFGQNRPLRPSRRLKPEGGPSEPLQERSPTLNSRDTQNPWAEDTLDGSFLGSGEELDLLSEILDSLSVEIKSGGQLRASQSLDCCQQGASESCSSLPDIPVGSPWQLEEDRRSQDPQLQSLPGDLSPLQDTPFSEVVSYSKNCPQPPSDISSLPTSSATSADPPSQRDPGPSSSSKLDPTPSQSPCSRTLRVPTQPTPPKSQLLASTEPNSDTVQKLQPIQSPLCSQSKENPRNQPPQVLLSQACIQPLKELGAPTSYVSHVGKHQEPQDRQPRVADLKKCFEN", "length": 786 }, "evidence": [ { "id": "F1SBS9", "url": "https://omabrowser.org/oma/group/F1SBS9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CFK6-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "Dennd1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSTETRHPPAMFDWFFEAGCPNSLEEDPPILRQFPPDFQEQEAMQMVPRFCFPFDIEREPPSPAVQHFTFALTDLVGNRRFGFCRLRAGARSCLCILSHFPWFEVFYKILNNVGDLLAQNQVAEAEELLQNLQQHPLLGPRFSGRSEMDSSITVRSECGILPPALGNSKLLSCFVAPDAASLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLTASKLSTLTACVHASCALLYPMRWEHVLIPTLPPHLLDYCCAPMPYLIGVHGSLAERVREKALEDVVVLNADSNTLETPFDDVQALPPDVVSLLRLRLRKVALSPGEGVSRLFLKVQALLFGGYRDALVCIPGQPVTFSEEAFLAQKPGAPLQAFHKKAVHLQLFKQFIESRLEKLNAGEGFSDQFEQEIIACRGASSGTLRSYQLWVDSLKKGSDALLHSMKTKTQPAVRNMYRSGDSLQEYCASKAKSGLKGMQNLLTIKDGDSGLQRGGSLRTPSLTSRSDRLQQRLPISQHFGQNRPLRPSRRLKTEEGPSEPLRERSPTLSPGDTQNPWAEDTLDGSFLGSGEELDLLSEILDSLNVETKSGDLQRASQSLDCCQRGAASESCSSLPDIPVGLPWQLEEDKRSQDPQPWSLPGDLSLLQDTPFSEVVSYSKNSCSQPFQQSPPSQGDPGPSLSKLDPRPSQSPCPKLLRVPTRHSPPESPQLLVSTEPNSDAVQRLQSISSPSCSHSAENPRNQPPQVLLGQACVQPLEELGAPTYVSHVSTQQRPQDKQPRVADLKKCFEN", "length": 786 }, "evidence": [ { "id": "F1SBS9", "url": "https://omabrowser.org/oma/group/F1SBS9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IV53-1", "protein_name": "DENN domain-containing protein 1C", "gene_name": "DENND1C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MESRAEGGSPAVFDWFFEAACPASLQEDPPILRQFPPDFRDQEAMQMVPKFCFPFDVEREPPSPAVQHFTFALTDLAGNRRFGFCRLRAGTQSCLCILSHLPWFEVFYKLLNTVGDLLAQDQVTEAEELLQNLFQQSLSGPQASVGLELGSGVTVSSGQGIPPPTRGNSKPLSCFVAPDSGRLPSIPENRNLTELVVAVTDENIVGLFAALLAERRVLLTASKLSTLTSCVHASCALLYPMRWEHVLIPTLPPHLLDYCCAPMPYLIGVHASLAERVREKALEDVVVLNVDANTLETTFNDVQALPPDVVSLLRLRLRKVALAPGEGVSRLFLKAQALLFGGYRDALVCSPGQPVTFSEEVFLAQKPGAPLQAFHRRAVHLQLFKQFIEARLEKLNKGEGFSDQFEQEITGCGASSGALRSYQLWADNLKKGGGALLHSVKAKTQPAVKNMYRSAKSGLKGVQSLLMYKDGDSVLQRGGSLRAPALPSRSDRLQQRLPITQHFGKNRPLRPSRRRQLEEGTSEPPGAGTPPLSPEDEGCPWAEEALDSSFLGSGEELDLLSEILDSLSMGAKSAGSLRPSQSLDCCHRGDLDSCFSLPNIPRWQPDDKKLPEPEPQPLSLPSLQNASSLDATSSSKDSRSQLIPSESDQEVTSPSQSSTASADPSIWGDPKPSPLTEPLILHLTPSHKAAEDSTAQENPTPWLSTAPTEPSPPESPQILAPTKPNFDIAWTSQPLDPSSDPSSLEDPRARPPKALLAERAHLQPREEPGALNSPATPTSNCQKSQPSSRPRVADLKKCFEG", "length": 801 }, "evidence": [ { "id": "F1SBS9", "url": "https://omabrowser.org/oma/group/F1SBS9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "clathrin-coated vesicle", "id": "GO:0030136", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030136", "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "pmid": "" }, { "name": "phosphatidylinositol phosphate binding", "id": "GO:1901981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901981", "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "endocytosis", "id": "GO:0006897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006897", "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "pmid": "" }, { "name": "endocytic recycling", "id": "GO:0032456", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032456", "evidence": [ { "database": "UniProtKB", "id": "F1SBS9", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 188, "end_pos": 190, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SBS9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SBS9" }, { "id": "PS50211", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50211" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UDENN", "eco_id": "ECO_0000259", "start_pos": 13, "end_pos": 395, "start_aa": "Phe", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 141 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 188, "end_pos": 190 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SIM4-1", "uniprot_ac": "F1SIM4", "uniprot_id": "F1SIM4_PIG", "mass": { "chemical_mass": 83833.0, "monoisotopic_mass": 83833.0 }, "refseq": { "ac": "XP_020934895", "name": "engulfment and cell motility protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934895" }, "gene_names": [ { "name": "ELMO1", "type": "recommended", "evidence": [ { "id": "F1SIM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIM4" } ] }, { "name": "ELMO1", "type": "synonym", "evidence": [ { "id": "XP_020934895", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934895" } ] } ], "protein_names": [ { "name": "Engulfment and cell motility 1", "type": "synonym", "evidence": [ { "id": "F1SIM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SIM4/entry#names_and_taxonomy" } ] }, { "name": "engulfment and cell motility protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020934895", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934895" } ] } ], "function": [ { "annotation": "Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in association with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.", "evidence": [ { "database": "UniProtKB", "id": "F1SIM4", "url": "https://www.uniprot.org/uniprotkb/F1SIM4#function" }, { "database": "UniProtKB", "id": "ARBA00024863", "url": "https://www.uniprot.org/uniprotkb/ARBA00024863#function" }, { "database": "UniProtKB", "id": "A0A8W4FFF3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFF3#function" }, { "database": "UniProtKB", "id": "A0A8W4FDE0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDE0#function" }, { "database": "UniProtKB", "id": "A0A4X1W6I3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6I3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SIM4", "url": "https://www.uniprot.org/uniprotkb/F1SIM4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ELMO1", "url": "https://www.uniprot.org/uniprotkb/F1SIM4", "locus": { "chromosome": "18", "start_pos": 37347283, "end_pos": 36786378, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000058042", "url": "https://www.ensembl.org/id/ENSSSCG00000058042" } ] } } ], "crossref": [ { "id": "cd13359", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13359", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100522109", "url": "https://www.ncbi.nlm.nih.gov/gene/100522109", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006816", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006816", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024574", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024574", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050868", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050868", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CPHMKDL", "url": "https://omabrowser.org/oma/group/CPHMKDL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SIM4", "url": "https://www.orthodb.org/?gene=F1SIM4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12771", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12771", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12771:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12771:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04727", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04727", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF11841", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11841", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF16457", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16457", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26964", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26964", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2029482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-4420097", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4420097", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8849471", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8849471", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9958810", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9958810", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020934895", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020934895", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1W6I3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6I3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W6I3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W6I3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDE0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDE0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDE0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDE0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFF3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FFF3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FFF3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIM4", "url": "https://www.uniprot.org/uniprotkb/F1SIM4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SIM4-1", "url": "https://www.uniprot.org/uniprotkb/F1SIM4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPPADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDVSILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNCRRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTQNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 727, "header": "tr|F1SIM4-1|F1SIM4_PIG Isoform 1 of Engulfment and cell motility 1 OS=Sus scrofa OX=9823 GN=ELMO1 PE=1 SV=3 CANONICAL=F1SIM4-1" }, "isoforms": [ { "isoform_ac": "A0A4X1W6I3-1", "url": "https://www.uniprot.org/uniprotkb/F1SIM4/entry#A0A4X1W6I3-1", "sequence": { "sequence": "MPPPADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDVSILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQVGVESSVDILDCPLTEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNCRRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTQNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 742, "header": "tr|A0A4X1W6I3-1|A0A4X1W6I3_PIG Computationally mapped isoform of Engulfment and cell motility 1 OS=Sus scrofa OX=9823 GN=ELMO1 PE=1 SV=1 CANONICAL=F1SIM4-1" }, "locus": { "chromosome": "18", "start_pos": 37334871, "end_pos": 36886524, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095013.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095013.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077355.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077355.1" } ] } }, { "isoform_ac": "A0A8W4FDE0-1", "url": "https://www.uniprot.org/uniprotkb/F1SIM4/entry#A0A8W4FDE0-1", "sequence": { "sequence": "MPPPADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDVSILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNCRRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTQNDTIIHLLIYSPSRHFSIY", "length": 702, "header": "tr|A0A8W4FDE0-1|A0A8W4FDE0_PIG Computationally mapped isoform of Engulfment and cell motility 1 OS=Sus scrofa OX=9823 GN=ELMO1 PE=4 SV=1 CANONICAL=F1SIM4-1" }, "locus": { "chromosome": "18", "start_pos": 37343826, "end_pos": 36886524, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105637.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105637.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077425.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077425.1" } ] } }, { "isoform_ac": "A0A8W4FFF3-1", "url": "https://www.uniprot.org/uniprotkb/F1SIM4/entry#A0A8W4FFF3-1", "sequence": { "sequence": "MQNVSLASRRKEEEVRAAAAGGAAAGGPGKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDVSILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNCRRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTQNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 730, "header": "tr|A0A8W4FFF3-1|A0A8W4FFF3_PIG Computationally mapped isoform of Engulfment and cell motility 1 OS=Sus scrofa OX=9823 GN=ELMO1 PE=1 SV=1 CANONICAL=F1SIM4-1" }, "locus": { "chromosome": "18", "start_pos": 37334871, "end_pos": 36786661, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094116.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094116.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077970.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077970.1" } ] } }, { "isoform_ac": "F1SIM4-1", "url": "https://www.uniprot.org/uniprotkb/F1SIM4/entry#F1SIM4-1", "sequence": { "sequence": "MPPPADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDVSILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNCRRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTQNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 727, "header": "tr|F1SIM4-1|F1SIM4_PIG Isoform 1 of Engulfment and cell motility 1 OS=Sus scrofa OX=9823 GN=ELMO1 PE=1 SV=3 CANONICAL=F1SIM4-1" }, "locus": { "chromosome": "18", "start_pos": 37334871, "end_pos": 36886524, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102419.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102419.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080421.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080421.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SIM4", "url": "https://www.uniprot.org/uniprotkb/F1SIM4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2029482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029482", "resource": "Reactome", "description": "Regulation of actin dynamics for phagocytic cup formation" }, { "id": "R-SSC-4420097", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4420097", "resource": "Reactome", "description": "VEGFA-VEGFR2 Pathway" }, { "id": "R-SSC-8849471", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8849471", "resource": "Reactome", "description": "PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases" }, { "id": "R-SSC-9958810", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9958810", "resource": "Reactome", "description": "SRC activates STAT3 in a quantitative manner, through Cadherin-11 (CDH11), RAC1 and gp130 (IL6ST)" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABI0P508-1", "protein_name": "Engulfment and cell motility 1", "gene_name": "ELMO1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPPPADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDVSILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFIQKNDFPQIICVWAKLLSSYLTLWDSMDHSLPGSSLHGILQNHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNCRRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 767 }, "evidence": [ { "id": "F1SIM4", "url": "https://omabrowser.org/oma/group/F1SIM4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HRA7-1", "protein_name": "Engulfment and cell motility protein 1 isoform X1", "gene_name": "Elmo1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPPPADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDISILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRYIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAELEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMLSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 727 }, "evidence": [ { "id": "F1SIM4", "url": "https://omabrowser.org/oma/group/F1SIM4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BPU7-1", "protein_name": "Engulfment and cell motility protein 1", "gene_name": "Elmo1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPPPSDIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDISILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGTDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRYIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 727 }, "evidence": [ { "id": "F1SIM4", "url": "https://omabrowser.org/oma/group/F1SIM4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q92556-1", "protein_name": "Engulfment and cell motility protein 1", "gene_name": "ELMO1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPPPADIVKVAIEWPGAYPKLMEIDQKKPLSAIIKEVCDGWSLANHEYFALQHADSSNFYITEKNRNEIKNGTILRLTTSPAQNAQQLHERIQSSSMDAKLEALKDLASLSRDVTFAQEFINLDGISLLTQMVESGTERYQKLQKIMKPCFGDMLSFTLTAFVELMDHGIVSWDTFSVAFIKKIASFVNKSAIDISILQRSLAILESMVLNSHDLYQKVAQEITIGQLIPHLQGSDQEIQTYTIAVINALFLKAPDERRQEMANILAQKQLRSIILTHVIRAQRAINNEMAHQLYVLQVLTFNLLEDRMMTKMDPQDQAQRDIIFELRRIAFDAESEPNNSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIVLENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETCNDFHPMFFTHDRSFEEFFCICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRALTTKPSSLDQFKSKLQNLSYTEILKIRQSERMNQEDFQSRPILELKEKIQPEILELIKQQRLNRLVEGTCFRKLNARRRQDKFWYCRLSPNHKVLHYGDLEESPQGEVPHDSLQDKLPVADIKAVVTGKDCPHMKEKGALKQNKEVLELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLGKDMMSDLTRNDLDTLLSMEIKLRLLDLENIQIPDAPPPIPKEPSNYDFVYDCN", "length": 727 }, "evidence": [ { "id": "F1SIM4", "url": "https://omabrowser.org/oma/group/F1SIM4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VKB2-1", "protein_name": "Ced-12", "gene_name": "Ced-12", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MIPKKTTVKDSHIVKIAVEREDHIAQLINLDQRHPLASKIQEICNGWSISDHQNYALQFYEPTNRKYVTEKNRNEIKNGSVLQLQYSPSKTACDAMEVLLNGSPQEKALRLKELTSLSTDHTFALEFIKEKGLDTLIKMIEDGGQTNEDILKYSLASFVELMEHGTVSWEVPENSFVARNIEIVRNFQKYPTNCGESALSNLENIVMCSNKHVLVAEDIKLQDILRLLQDVNSPVMRQNAIALLNALFVKADEGRRRTIAQTISAKQFRLALIGNGLGTEMTHQLYVLQTLTLGLLEKRMRMKMNAQDQDAHEKIKELRRIAFDDNTNALNQNDDHIRRGGGSGAGNVNFSQYYKKLGFKCDINPAQDFIETPPGILALDCMVYFARNYTQQYAKIVRENSCRADEHECPFGRTSIELVKVLCDILRIGEPPAEQSGDFQPMFFTHDSPFEEFFCICVITLNRTWKDMRATAEDFSTTFSVVREQIQRTLKGRPENLDDFRNKIALLTYQQITTLRQQERTSKEECDSTASAIVKLKEKISPQILELIKQQRLSFLVEGTHFAKYLRGTRTKDKFWYARLSPNHKVIHYGDCDEKTIPTMEELPKKLPISEIKQLLEGKECPHMKETRIRKSAVNLAFSITFENMEHSTLDFVAPDESIFNYWTDGINALLGQPMVSKQKNEDFDTLLSMEIKLRLLDTEGVDISKDPPPIPEDPENYDFCFES", "length": 724 }, "evidence": [ { "id": "F1SIM4", "url": "https://omabrowser.org/oma/group/F1SIM4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { 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"pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "phagocytosis, engulfment", "id": "GO:0006911", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006911", "evidence": [ { "database": "UniProtKB", "id": "F1SIM4", "url": "https://www.uniprot.org/uniprotkb/F1SIM4" } ], "pmid": "" }, { "name": "actin filament organization", "id": "GO:0007015", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007015", "evidence": [ { "database": "UniProtKB", "id": "F1SIM4", "url": "https://www.uniprot.org/uniprotkb/F1SIM4" } ], "pmid": "" }, { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "F1SIM4", "url": "https://www.uniprot.org/uniprotkb/F1SIM4" } ], "pmid": "" }, { "name": "Rac protein signal transduction", "id": "GO:0016601", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016601", "evidence": [ { "database": "UniProtKB", "id": "F1SIM4", "url": 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[ { "id": "F1SK35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK35/entry#names_and_taxonomy" } ] }, { "name": "Cellular retinaldehyde-binding protein", "type": "synonym", "evidence": [ { "id": "F1SK35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK35/entry#names_and_taxonomy" } ] }, { "name": "retinaldehyde-binding protein 1 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020954617", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954617" } ] } ], "function": [ { "annotation": "Soluble retinoid carrier essential the proper function of both rod and cone photoreceptors. Participates in the regeneration of active 11-cis-retinol and 11-cis-retinaldehyde, from the inactive 11-trans products of the rhodopsin photocycle and in the de novo synthesis of these retinoids from 11-trans metabolic precursors. The cycling of retinoids between photoreceptor and adjacent pigment epithelium cells is known as the 'visual cycle'.", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35#function" }, { "database": "UniProtKB", "id": "ARBA00059298", "url": "https://www.uniprot.org/uniprotkb/ARBA00059298#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RLBP1", "url": "https://www.uniprot.org/uniprotkb/F1SK35", "locus": { "chromosome": "7", "start_pos": 54776113, "end_pos": 54889014, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000001836", "url": "https://www.ensembl.org/id/ENSSSCG00000001836" } ] } } ], "crossref": [ { "id": "ENSSSCG00000001836", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000001836", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00170", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00170", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100521278", "url": "https://www.ncbi.nlm.nih.gov/gene/100521278", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001251", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001251", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011074", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011074", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036273", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036273", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036865", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036865", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IETCTLI", "url": "https://omabrowser.org/oma/group/IETCTLI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10174", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10174", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10174:SF200", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10174:SF200", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00650", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00650", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03765", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03765", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2187335", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2187335", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2453902", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2453902", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020954617", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020954617", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287BNP8", "url": "https://www.uniprot.org/uniprotkb/A0A287BNP8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BNP8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BNP8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TYG3", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TYG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1TYG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1TYG3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U3G9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U3G9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1U3G9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1U3G9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SK35-1", "url": "https://www.uniprot.org/uniprotkb/F1SK35-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEGAGTFRMVPEEEQELRAQLERLTTKDHGPVFGQCSQLPRHTLQKAKDELNEREETREEVVRELQELVQAEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSLEAIRCTVEAGYPGVLSTRDKYGRVVMLFNIENWDAEEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAGLRASDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSDFFQEFDEDILPSDFGGTLPKYDGKVVAEQLFGPRAQAENTAF", "length": 317, "header": "tr|F1SK35-1|F1SK35_PIG Isoform 1 of Retinaldehyde-binding protein 1 OS=Sus scrofa OX=9823 GN=RLBP1 PE=1 SV=2 CANONICAL=F1SK35-1" }, "isoforms": [ { "isoform_ac": "A0A287BNP8-1", "url": "https://www.uniprot.org/uniprotkb/F1SK35/entry#A0A287BNP8-1", "sequence": { "sequence": "MSEGAGTFRMVPEEEQELRAQLERLTTKDHGPVFGQCSQLPRHTLQKAKDELNEREETREEVVRELQELVQAEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSLEAIRCTVEAGYPGVLSTRDKYGRVVMLFNIENWDAEEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAGLRASDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSDFFQEFDEDILPSDFGGTLPKLVLCEDTGRILLDRKISTSKDTQPRHIFSLLFF", "length": 328, "header": "tr|A0A287BNP8-1|A0A287BNP8_PIG Computationally mapped isoform of Retinaldehyde binding protein 1 OS=Sus scrofa OX=9823 GN=RLBP1 PE=1 SV=2 CANONICAL=F1SK35-1" }, "locus": { "chromosome": "7", "start_pos": 54796332, "end_pos": 54776116, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049467.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049467.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057706.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057706.2" } ] } }, { "isoform_ac": "A0A4X1TYG3-1", "url": "https://www.uniprot.org/uniprotkb/F1SK35/entry#A0A4X1TYG3-1", "sequence": { "sequence": "MGTGRQRRGLKMLDSPELRCPKEELLPWQEGNCLDRPGQKKWSLSLSEPSESPRGSMSEGAGTFRMVPEEEQELRAQLERLTTKDHGPVFGQCSQLPRHTLQKAKDELNEREETREEVVRELQELVQAEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSLEAIRCTVEAGYPGVLSTRDKYGRVVMLFNIENWDAEEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAGLRASDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSDFFQEFDEDILPSDFGGTLPKLVLCEDTGRILLDRKISTSKDTQPRHIFSLLFF", "length": 384, "header": "tr|A0A4X1TYG3-1|A0A4X1TYG3_PIG Computationally mapped isoform of Retinaldehyde binding protein 1 OS=Sus scrofa OX=9823 GN=RLBP1 PE=1 SV=1 CANONICAL=F1SK35-1" }, "locus": { "chromosome": "7", "start_pos": 54889014, "end_pos": 54776116, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057356.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057356.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041134.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041134.1" } ] } }, { "isoform_ac": "A0A4X1U3G9-1", "url": "https://www.uniprot.org/uniprotkb/F1SK35/entry#A0A4X1U3G9-1", "sequence": { "sequence": "MGTGRQRRGLKMLDSPELRCPGAEGREGNCLDRPGQKKWSLSLSEPSESPRGSMSEGAGTFRMVPEEEQELRAQLERLTTKDHGPVFGQCSQLPRHTLQKAKDELNEREETREEVVRELQELVQAEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSLEAIRCTVEAGYPGVLSTRDKYGRVVMLFNIENWDAEEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAGLRASDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSDFFQEFDEDILPSDFGGTLPKLVLCEDTGRILLDRKISTSKDTQPRHIFSLLFF", "length": 381, "header": "tr|A0A4X1U3G9-1|A0A4X1U3G9_PIG Computationally mapped isoform of Retinaldehyde binding protein 1 OS=Sus scrofa OX=9823 GN=RLBP1 PE=1 SV=1 CANONICAL=F1SK35-1" }, "locus": { "chromosome": "7", "start_pos": 54889014, "end_pos": 54776116, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046543.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046543.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058384.2", "url": "https://www.ensembl.org/id/ENSSSCP00000058384.2" } ] } }, { "isoform_ac": "F1SK35-1", "url": "https://www.uniprot.org/uniprotkb/F1SK35/entry#F1SK35-1", "sequence": { "sequence": "MSEGAGTFRMVPEEEQELRAQLERLTTKDHGPVFGQCSQLPRHTLQKAKDELNEREETREEVVRELQELVQAEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSLEAIRCTVEAGYPGVLSTRDKYGRVVMLFNIENWDAEEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAAGLRASDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSDFFQEFDEDILPSDFGGTLPKYDGKVVAEQLFGPRAQAENTAF", "length": 317, "header": "tr|F1SK35-1|F1SK35_PIG Isoform 1 of Retinaldehyde-binding protein 1 OS=Sus scrofa OX=9823 GN=RLBP1 PE=1 SV=2 CANONICAL=F1SK35-1" }, "locus": { "chromosome": "7", "start_pos": 54796332, "end_pos": 54784809, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002058.4", "url": "https://www.ensembl.org/id/ENSSSCT00000002058.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002009.3", "url": "https://www.ensembl.org/id/ENSSSCP00000002009.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2187335", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2187335", "resource": "Reactome", "description": "The retinoid cycle in cones (daylight vision)" }, { "id": "R-SSC-2453902", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2453902", "resource": "Reactome", "description": "The canonical retinoid cycle in rods (twilight vision)" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M1C6-1", "protein_name": "Retinaldehyde-binding protein 1", "gene_name": "Rlbp1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEKEETREEVVRELQELVQAQAASGEELALAVAERVQARDSAFLLRFIRARKFDVGRAYELLKGYVNFRLQYPELFDSLSMEAVRCTIEAGYPGVLSSRDKYGRVVMIFNIENWHCEEVTFDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPKYDGKVVAEQLFGPRIQVENTAL", "length": 317 }, "evidence": [ { "id": "F1SK35", "url": "https://omabrowser.org/oma/group/F1SK35/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3Z956-1", "protein_name": "Retinaldehyde-binding protein 1", "gene_name": "Rlbp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEREETRDEAVRELQELVQAQAASGEELAVAVAERVQARDSAFLLRFIRARKFDVGRAYELLKGYVNFRLQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRVVMLFNIENWHCEEVTFDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPKYDGKVVAEQLFGPRVEVENTAL", "length": 317 }, "evidence": [ { "id": "F1SK35", "url": "https://omabrowser.org/oma/group/F1SK35/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P10123-1", "protein_name": "Retinaldehyde-binding protein 1", "gene_name": "RLBP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSEGAGTFRMVPEEEQELRAQLERLTTKDHGPVFGPCSQLPRHTLQKAKDELNEKEETREEAVRELQELVQAEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTVEAGYPGVLSTRDKYGRVVMLFNIENWDSEEITFDEILQAYCVILEKLLENEETQINGFCIIENFKGFTMQQAAGLRPSDLRKMVDMLQDSFPARFKAIHFIYQPWYFTTTYNVVKPFLKSKLLQRVFVHGEDLSSFYQEFDEDILPSDFGGTLPKYDGKAVAEQLFGPRDQTENTAF", "length": 317 }, "evidence": [ { "id": "F1SK35", "url": "https://omabrowser.org/oma/group/F1SK35/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P12271-1", "protein_name": "Retinaldehyde-binding protein 1", "gene_name": "RLBP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSEGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDFGGTLPKYDGKAVAEQLFGPQAQAENTAF", "length": 317 }, "evidence": [ { "id": "F1SK35", "url": "https://omabrowser.org/oma/group/F1SK35/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q86JC9-1", "protein_name": "Cellular retinaldehyde-binding/triple function domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSGYVGNLSPEQEHQLGIIKSKIAEINDPVVEKEIQQLDDSMTLRFLRARKWNLKDSFDMLYEALKFRATFQDVGVEGITESMVVNELKSGKSYFHGVDKGGRPVCIVKTSRHDSYNRDLNESMRYCVYVMENGKSMLKDGIETCTLIFDMSDFSSKNMDYPLVKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFVKTKQLVDYIPKDQLESSYGGTSTFKYTYEGKEVK", "length": 247 }, "evidence": [ { "id": "F1SK35", "url": "https://omabrowser.org/oma/group/F1SK35/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Z275-1", "protein_name": "Retinaldehyde-binding protein 1", "gene_name": "Rlbp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDGVGTFRMVPEEEQELRAQLEQLTTKDHGPVFGPCSQLPRHTLQKAKDELNEKEETREEAVRELQELVQAQAASGEELALAVAERVQARDSAFLLRFIRARKFDVGRAYELLKGYVNFRLQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRVVMLFNIENWHCEEVTFDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQQAAGLRPSDLKKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENILPADFGGTLPKYDGKVVAEQLFGPRAEVENTAL", "length": 317 }, "evidence": [ { "id": "F1SK35", "url": "https://omabrowser.org/oma/group/F1SK35/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "phosphatidylinositol bisphosphate binding", "id": "GO:1902936", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902936", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "pmid": "" }, { "name": "11-cis retinal binding", "id": "GO:0005502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005502", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "pmid": "" }, { "name": "retinol binding", "id": "GO:0019841", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019841", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "visual perception", "id": "GO:0007601", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007601", "evidence": [ { "database": "UniProtKB", "id": "F1SK35", "url": "https://www.uniprot.org/uniprotkb/F1SK35" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SK35", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SK35" }, { "id": "PS50191", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50191" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CRAL-TRIO", "eco_id": "ECO_0000259", "start_pos": 136, "end_pos": 297, "start_aa": "Ile", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ 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"count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQ46-1", "uniprot_ac": "F1SQ46", "uniprot_id": "F1SQ46_PIG", "mass": { "chemical_mass": 32695.0, "monoisotopic_mass": 32695.0 }, "refseq": { "ac": "XP_003355623", "name": "Y-box-binding protein 3 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355623" }, "gene_names": [ { "name": "YBX3", "type": "recommended", "evidence": [ { "id": "F1SQ46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ46" } ] }, { "name": "YBX3", "type": "synonym", "evidence": [ { "id": "XP_003355623", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355623" } ] } ], "protein_names": [ { "name": "Y-box binding protein 3", "type": "synonym", "evidence": [ { "id": "F1SQ46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ46/entry#names_and_taxonomy" } ] }, { "name": "Y-box-binding protein 3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003355623", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355623" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQ46", "url": "https://www.uniprot.org/uniprotkb/F1SQ46" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "YBX3", "url": "https://www.uniprot.org/uniprotkb/F1SQ46", "locus": { "chromosome": "5", "start_pos": 61361279, "end_pos": 61337862, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000633", "url": "https://www.ensembl.org/id/ENSSSCG00000000633" } ] } } ], "crossref": [ { "id": "F1SQ46", "url": "https://alphafold.ebi.ac.uk/entry/F1SQ46", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000633", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000633", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04458", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04458", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100518125", "url": "https://www.ncbi.nlm.nih.gov/gene/100518125", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002059", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002059", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011129", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011129", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012340", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012340", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR019844", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019844", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050181", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050181", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518125", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518125", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FYPQFRQ", "url": "https://omabrowser.org/oma/group/FYPQFRQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SQ46", "url": "https://www.orthodb.org/?gene=F1SQ46", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LQF8", "url": "https://www.orthodb.org/?gene=I3LQF8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11544", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11544", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00313", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00313", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003355623", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355623", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QPK7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPK7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPK7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ46", "url": "https://www.uniprot.org/uniprotkb/F1SQ46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ46-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ46-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQF8", "url": "https://www.uniprot.org/uniprotkb/I3LQF8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQF8-1", "url": "https://www.uniprot.org/uniprotkb/I3LQF8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSEAGEATTTSTTSTTTTTTTLPQAPAEAAAAAPQDPAPKSPAGSGAPQAAAPAPAALVAGNPGGDAAPAAPTAPGTAAPASSAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNAGEIGEMKDGVPEGTQLQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQAANGPNQPPARRGYRRPYNYRRRPRPPNAPSQDGKETKAGEAPSDNPAPATEQSSAE", "length": 312, "header": "tr|F1SQ46-1|F1SQ46_PIG Isoform 1 of Y-box binding protein 3 OS=Sus scrofa OX=9823 GN=YBX3 PE=1 SV=2 CANONICAL=F1SQ46-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QPK7-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ46/entry#A0A5G2QPK7-1", "sequence": { "sequence": "MSEAGEATTTSTTSTTTTTTTLPQAPAEAAAAAPQDPAPKSPAGSGAPQAAAPAPAALVAGNPGGDAAPAAPTAPGTAAPASSAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRYTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFEPPATDGQFSGARSQLRRPQYRPQYRRRFPPYHVGQTFDRRSRVFPHPNRMQAGEIGEMKDGVPEGTQLQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQAANGPNQPPARRGYRRPYNYRRRPRPPNAPSQDGKETKAGEAPSDNPAPATEQSSAE", "length": 370, "header": "tr|A0A5G2QPK7-1|F1SQ46_PIG Computationally mapped isoform of Y-box binding protein 3 OS=Sus scrofa OX=9823 GN=YBX3 PE=1 SV=1 CANONICAL=F1SQ46-1" }, "locus": { "chromosome": "5", "start_pos": 61359047, "end_pos": 61338072, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086287.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086287.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065996.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065996.1" } ] } }, { "isoform_ac": "F1SQ46-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ46/entry#F1SQ46-1", "sequence": { "sequence": "MSEAGEATTTSTTSTTTTTTTLPQAPAEAAAAAPQDPAPKSPAGSGAPQAAAPAPAALVAGNPGGDAAPAAPTAPGTAAPASSAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNAGEIGEMKDGVPEGTQLQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQAANGPNQPPARRGYRRPYNYRRRPRPPNAPSQDGKETKAGEAPSDNPAPATEQSSAE", "length": 312, "header": "tr|F1SQ46-1|F1SQ46_PIG Isoform 1 of Y-box binding protein 3 OS=Sus scrofa OX=9823 GN=YBX3 PE=1 SV=2 CANONICAL=F1SQ46-1" }, "locus": { "chromosome": "5", "start_pos": 61359047, "end_pos": 61338072, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000680.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000680.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000665.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000665.2" } ] } }, { "isoform_ac": "I3LQF8-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ46/entry#I3LQF8-1", "sequence": { "sequence": "MSEAGEATTTSTTSTTTTTTTLPQAPAEAAAAAPQDPAPKSPAGSGAPQAAAPAPAALVAGNPGGDAAPAAPTAPGTAAPASSAAAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGFEPPATDGQFSGARSQLRRPQYRPQYRRRFPPYHVGQTFDRRSRVFPHPNRMQAGEIGEMKDGVPEGTQLQGPVHRNPTYRPRYRSRGPPRPRPAPAVGEAEDKENQQAANGPNQPPARRGYRRPYNYRRRPRPPNAPSQDGKETKAGEAPSDNPAPATEQSSAE", "length": 380, "header": "tr|I3LQF8-1|F1SQ46_PIG Computationally mapped isoform of Y-box binding protein 3 OS=Sus scrofa OX=9823 GN=YBX3 PE=1 SV=1 CANONICAL=F1SQ46-1" }, "locus": { "chromosome": "5", "start_pos": 61359047, "end_pos": 61338072, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027246.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027246.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026338.1", "url": "https://www.ensembl.org/id/ENSSSCP00000026338.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 73, "start_aa": "Thr", "end_pos": 73, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr73", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LQF8", "url": "https://www.uniprot.org/uniprotkb/I3LQF8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518125", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518125", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZPU8-1", "protein_name": "Y-box binding protein 3", "gene_name": "YBX3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSEAAETGTASGTAPAAAAPAPPPPPPAAAPPDVKPKSPVSGAAPGASGGEVAPAASGSAAATTAAAAAGETEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYFGRRRGPPRSGVEGEIKDGVTEGGQIHQQVQRNPTYRPRYRRGPLRPRPAPVAGEAENKENQHEAGAVSQQPLRRGYRRPYNYRRRPRPPNTPAQDGKETKVTETPAENPAPVTEQSGAE", "length": 291 }, "evidence": [ { "id": "F1SQ46", "url": "https://omabrowser.org/oma/group/F1SQ46/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F6PS38-1", "protein_name": "Y-box binding protein 3", "gene_name": "YBX3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSEAGEATSTTSTAAAAPSSSAPITTAAALPQAPAEAAPQDPAPKSPAGGGAPPAPAPAALVSGNPGGDAAPGTAAPASSAAVGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRYVCVSLHTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYAGEEEEEGSGSSEGLEAPAAAGQFSAARSQPRRPQFRPQYRRRFPPYHVGQTFDRRSRVFPHPSRMQAGEIGEMKDGVPEGAQLQGPVHRNPTYRARYRRGPPRPRPAPAVGEAEDKENQQAANGPNQPPARRGYQRPYNYRRRPRPPNAPSQDGKETKAGEAPSENPAPAPEQSSAE", "length": 372 }, "evidence": [ { "id": "F1SQ46", "url": "https://omabrowser.org/oma/group/F1SQ46/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P16989-1", "protein_name": "Y-box-binding protein 3", "gene_name": "YBX3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.uniprot.org/uniprotkb/F1SUX3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "VNKQDSMDTSVQEPPLDYSFRNIHVTQDLLSEEPRTGLRPLRHSKSGKSMTQSLWLNNNVLTDLRDFSHVVSQLLEHPENLAWIDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQRLGEVNKLAVLPRLRSLTLHGNPIEEEKGYRQYVLCTVPRVTTFDFSGVTKADRATAQVWKRMHVKPRKARRTEHDAR", "length": 193, "header": "tr|F1SUX3-1|F1SUX3_PIG Isoform 1 of Leucine-rich repeat-containing protein 51 OS=Sus scrofa OX=9823 GN=LRRC51 PE=4 SV=4 CANONICAL=F1SUX3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V2A4-1", "url": "https://www.uniprot.org/uniprotkb/F1SUX3/entry#A0A4X1V2A4-1", "sequence": { "sequence": "MVEFQASVTDLLSEEPRTGLRPLRHSKSGKSMTQSLWLNNNVLTDLRDFSHVVSQLLEHPENLAWIDLSFNDLTSIDPVLTTFFNLSVLYLHGNSIQRLGEVNKLAVLPRLRSLTLHGNPIEEEKGYRQYVLCTVPRVTTFDFSGVTKADRATAQVWKRMHVKPRKARRTEHDAR", "length": 175, "header": "tr|A0A4X1V2A4-1|F1SUX3_PIG Computationally mapped isoform of Leucine-rich repeat-containing protein 51 OS=Sus scrofa OX=9823 GN=LRRC51 PE=4 SV=1 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Transcript", "id": "ENSSSCT00000016154.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016154.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015722.4", "url": "https://www.ensembl.org/id/ENSSSCP00000015722.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V2A4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V2A4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SUX3", "url": "https://www.uniprot.org/uniprotkb/F1SUX3" } ], "pmid": "" }, { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "F1SUX3", "url": "https://www.uniprot.org/uniprotkb/F1SUX3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": 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"https://www.ncbi.nlm.nih.gov/gene/100621913", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR018958", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018958", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039231", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039231", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WQFLAET", "url": "https://omabrowser.org/oma/group/WQFLAET/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR31854", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31854", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31854:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31854:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09346", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09346", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020951952", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951952", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1V3P6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V3P6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V3P6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V3P6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V3P9", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V3P9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V3P9-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V3P9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA68", "url": "https://www.uniprot.org/uniprotkb/I3LA68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LA68-1", "url": "https://www.uniprot.org/uniprotkb/I3LA68-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEETPPPLLGSSKPHLEKLTLGITRILESSPGVTEVTIVEKVPAERHMISSWEQKNNCLLPEDLKNFYLMTNGFHMTWSVKLDEHTIPLGSMAINSISKLTQLNQSSMYSLPNAPTLADLEDDTQEAGENQPEKPHFDSRSVIFELDPCNGNGKVCLVYKRGKPALAQDSEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFNMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNKTLIPKKKGPPQPAGGQKGPSGPPSTSKSSSGSGNPVRK", "length": 294, "header": "tr|I3LA68-1|I3LA68_PIG Isoform 1 of Tubulin polyglutamylase complex subunit 2 OS=Sus scrofa OX=9823 GN=TPGS2 PE=4 SV=4 CANONICAL=I3LA68-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V3P6-1", "url": "https://www.uniprot.org/uniprotkb/I3LA68/entry#A0A4X1V3P6-1", "sequence": { "sequence": "MEETPPPLLGSSKPHLEKLTLGITRILESSPGVTEVTIVEKVPAERHMISSWEQKNNCLLPEDLKNFYLMTNGFHMTWSVKLDEHTIPLGSMAINSISKLTQLNQSSMYSLPNAPTLADLEDDTQEDNL", "length": 129, "header": "tr|A0A4X1V3P6-1|I3LA68_PIG Computationally mapped isoform of Tubulin polyglutamylase complex subunit 2 OS=Sus scrofa OX=9823 GN=TPGS2 PE=4 SV=1 CANONICAL=I3LA68-1" }, "locus": { "chromosome": "6", "start_pos": 120669965, "end_pos": 120590034, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070657.1", "url": "https://www.ensembl.org/id/ENSSSCT00000070657.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062269.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062269.1" } ] } }, { "isoform_ac": "A0A4X1V3P9-1", "url": "https://www.uniprot.org/uniprotkb/I3LA68/entry#A0A4X1V3P9-1", "sequence": { "sequence": "MEETPPPLLGSSKPHLEKLTLGITRILESSPGVTEVTIVEKVPAERHMISSWEQKNNCLLPEDLKNFYLMTNGFHMTWSVKLDAGENQPEKPHFDSRSVIFELDPCNGNGKVCLVYKRGKPALAQDSEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFNMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNKTLIPKKKGPPQPAGGQKGPSGPPSTSKSSSGSGNPVRK", "length": 251, "header": "tr|A0A4X1V3P9-1|I3LA68_PIG Computationally mapped isoform of Tubulin polyglutamylase complex subunit 2 OS=Sus scrofa OX=9823 GN=TPGS2 PE=4 SV=1 CANONICAL=I3LA68-1" }, "locus": { "chromosome": "6", "start_pos": 120669965, "end_pos": 120607034, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042150.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042150.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057562.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057562.2" } ] } }, { "isoform_ac": "I3LA68-1", "url": "https://www.uniprot.org/uniprotkb/I3LA68/entry#I3LA68-1", "sequence": { "sequence": "MEETPPPLLGSSKPHLEKLTLGITRILESSPGVTEVTIVEKVPAERHMISSWEQKNNCLLPEDLKNFYLMTNGFHMTWSVKLDEHTIPLGSMAINSISKLTQLNQSSMYSLPNAPTLADLEDDTQEAGENQPEKPHFDSRSVIFELDPCNGNGKVCLVYKRGKPALAQDSEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFNMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNKTLIPKKKGPPQPAGGQKGPSGPPSTSKSSSGSGNPVRK", "length": 294, "header": "tr|I3LA68-1|I3LA68_PIG Isoform 1 of Tubulin polyglutamylase complex subunit 2 OS=Sus scrofa OX=9823 GN=TPGS2 PE=4 SV=4 CANONICAL=I3LA68-1" }, "locus": { "chromosome": "6", "start_pos": 120669965, "end_pos": 120607034, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028255.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028255.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020935.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020935.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V3P6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V3P6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YB54-1", "protein_name": "Tubulin polyglutamylase complex subunit 2", "gene_name": "TPGS2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEEKPSAGIRPHLDKLTLGVTRILETSPGVSDVTLVEKEPADRHAIISWEQKNACILPEDLKNFYLMTDGFQMTWSVKIDDTPMPLGSMVINSISKLCRLGGSSMYTVPNAPSLADLEDDTDEEGKVLLTGNEDKPEKPHFDSRSLIFELDPCNGNGKVCLVYRHTKPVVSPDTEIWFLDRALYWHFLTKTFTAYYRLLITHLGLPQWQYAFTSYGVSPQAKQWFNMYKPITINTTLLSEEADSFVNKLDPSKIFKSKNKTPVMKKKQPSQPAGVQKSNTSMPSTKTSSLAGNSSRKRDPQI", "length": 302 }, "evidence": [ { "id": "I3LA68", "url": "https://omabrowser.org/oma/group/I3LA68/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q66JT5-1", "protein_name": "Tubulin polyglutamylase complex subunit 2", "gene_name": "Tpgs2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEETTPPLQAGSKPHLEKLTLGVTRILESSPGVTEVSIIEKLPAERHVISSWEQKNNCVMPEDVRNFYLMTNGFHMTWSVKLDEHIIPLGSMVINGISKLTQLIQSSVYSLPNAPTLADLEDDTQEGNEDHQLEKPHFDCRSAIFELDSCNGNGKVCLVYKNGKPGLAHDTEIWFLDRALYWHFLTDTFIAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFSMYKPITYNTSLLTEESDNFANKLDPSKVFKSKNKILIPKKKGPVPPASGQKGPGPLPPPTSKPTTGSGNPVRK", "length": 296 }, "evidence": [ { "id": "I3LA68", "url": "https://omabrowser.org/oma/group/I3LA68/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q68CL5-2", "protein_name": "Tubulin polyglutamylase complex subunit 2", "gene_name": "TPGS2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEEASSPGLGCSKPHLEKLTLGITRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHMTWSVKLDEHIIPLGSMAINSISKLTQLTQSSMYSLPNAPTLADLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKQWFSMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNKIVIPKKKGPVQPAGGQKGPSGPSGPSTSSTSKSSSGSGNPTRK", "length": 300 }, "evidence": [ { "id": "I3LA68", "url": "https://omabrowser.org/oma/group/I3LA68/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VTS1-1", "protein_name": "Knr4/Smi1-like domain-containing protein", "gene_name": "Dmel\\CG6931", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MMNKKLSPEDAFYENLTLGLIRTLSNVPRVCNVTLERRQPLNACQLVNWEQRHCVYLPEDMKKFYLSSDGFILNWSYQYAPNDIRRVGHIHFPHLLQVTLLRENIETTSSHSSNSTAVPNSNSDVVGAAGSSQSLPAPIATGKDKWGNATPIITAKSKIFEINNVNEVAKVCMLYESTSSNNPKFYLLELSTLSWQFLADTFSEYLRMAIAHLGLPYWELCFSTCGLPSWTEQLFLLLAPHLLEEHEPRRGRVLNPACEHPYNIIDPNIFRGKPKSVAKATATSTKQNHK", "length": 290 }, "evidence": [ { "id": "I3LA68", "url": "https://omabrowser.org/oma/group/I3LA68/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LA68-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 294, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LA68-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LA68" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LA68", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LA68" }, { "id": "SM00860", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00860" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Knr4/Smi1-like", "eco_id": "ECO_0000259", "start_pos": 43, "end_pos": 186, "start_aa": "Pro", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 104, "end_pos": 106 }, { "start_pos": 255, "end_pos": 257 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SN13-1", "uniprot_ac": "F1SN13", "uniprot_id": "F1SN13_PIG", "mass": { "chemical_mass": 122344.0, "monoisotopic_mass": 122344.0 }, "refseq": { "ac": "XP_020930571", "name": "coiled-coil domain-containing protein 150 isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930571" }, "gene_names": [ { "name": "CCDC150", "type": "recommended", "evidence": [ { "id": "F1SN13", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN13" } ] }, { "name": "CCDC150", "type": "synonym", "evidence": [ { "id": "XP_020930571", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930571" } ] } ], "protein_names": [ { "name": "Coiled-coil domain containing 150", "type": "synonym", "evidence": [ { "id": "F1SN13", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN13/entry#names_and_taxonomy" } ] }, { "name": "coiled-coil domain-containing protein 150 isoform X4", "type": "synonym", "evidence": [ { "id": "XP_020930571", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930571" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SN13", "url": "https://www.uniprot.org/uniprotkb/F1SN13" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC150", "url": "https://www.uniprot.org/uniprotkb/F1SN13", "locus": { "chromosome": "15", "start_pos": 100634779, "end_pos": 100539414, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016069", "url": "https://www.ensembl.org/id/ENSSSCG00000016069" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016069", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016069", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154260", "url": "https://www.ncbi.nlm.nih.gov/gene/100154260", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR038807", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038807", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "TCRYNPG", "url": "https://omabrowser.org/oma/group/TCRYNPG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35352", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35352", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35352:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35352:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_020930571", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930571", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287B1E8", "url": "https://www.uniprot.org/uniprotkb/A0A287B1E8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B1E8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B1E8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VFG1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFG1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VFG1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFG1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN13", "url": "https://www.uniprot.org/uniprotkb/F1SN13", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN13-1", "url": "https://www.uniprot.org/uniprotkb/F1SN13-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHK7", "url": "https://www.uniprot.org/uniprotkb/I3LHK7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LHK7-1", "url": "https://www.uniprot.org/uniprotkb/I3LHK7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDCAMHMETTVSRPVISPTHINATASETFTVLQQRMRIVEEQTSSLRDDLIMLDFGEKRGQLETPECLEQPVSQSIISPIQKEIICSGKTDILWKNCEFLVNRMCRLESLIQSLKMNIFRLQTEKELNPQKTAFLKDRLNTIQEEHSRDLKLLQLEVMNLRQQLRDVKEEEDKAQDEVQRLTVTLERASETKKNAAIIEEELKITKRKMNLKIQELRRQLSQEKHLRETLEKSGSAMLLKIQEMASTVEMERKQVQILQQNCIALRNSIQTTQELLAQEQQQKGELETATSQLKSDLVSRDDLISKLVEENKNLQMSFSKEHEENAYLRSEIMSLHEASEKAQALNEQLTRNCSELNSMLQTVRMENTRIIANHQAILQEEQKMMTKTFQEQNLLLDAAHASITSELQTVQNEKTQLQVHLDHLILEHNQCTQKAQDAEKRTAVQKELLESTIVRLRDELEASMQEKNSLLEEKERLQSKVNKAEKEVAQEKSNLEEELAKNKLARQQVENVLGKITESKNKLAYEKGKLQIKVKQLEEQLHSFTETSSQNDHLRKLNKALEGKYAQVKSILEKNEEELSRAVKGRDAALKESQKLKGDLEALEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERALNQQRVQKLEAEVDQWQARMLVVDAQHNSEMEPLQKALDIAREDNRKLAMSLEQALQTNNHLQTKLDHVQEKLENKEQELQNLETFKERMNEESKMEAELHAERIEALRKQFQTERETAKKAAQREMTELKKALDEANFRSVEVSRTNRELRQKLTELEKMLNSSKEKIKNQKAQIKLHLSAKANNVQNMERMKQIETELRQMELIKDQYQKKNYEQSLSIQKFVSEMTNLQKEMQLLAKSQYDTSARNKQQELRLELERKVRQELEHRCQELEETVRHLKKCKEATENKLKEASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEEDQDKSHDNMSSQSALHRWENKQNLRLVPKKCHSELEKK", "length": 1046, "header": "tr|F1SN13-1|F1SN13_PIG Isoform 1 of Coiled-coil domain containing 150 OS=Sus scrofa OX=9823 GN=CCDC150 PE=4 SV=3 CANONICAL=F1SN13-1" }, "isoforms": [ { "isoform_ac": "A0A287B1E8-1", "url": "https://www.uniprot.org/uniprotkb/F1SN13/entry#A0A287B1E8-1", "sequence": { "sequence": "MSFSKEHEENAYLRSEIMSLHEASEKAQALNEQLTRNCSELNSMLQTVRMENTRIIANHQAILQEEQKMMTKTFQEQNLLLDAAHASITSELQTVQNEKTQLQVHLDHLILEHNQCTQKAQDAEKRTAVQKELLESTIVRLRDELEASMQEKNSLLEEKERLQSKVNKAEKEVAQEKSNLEEELAKNKVDINALTHNLQTLEEKNKQLADQMASLELEQATSDYHWLARQQVENVLGKITESKNKLAYEKGKLQIKVKQLEEQLHSFTETSSQNDHLRKLNKALEGKYAQVKSILEKNEEELSRAVKGRDAALKESQKLKGDLEALEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERALNQQRVQKLEAEVDQWQARMLVVDAQHNSEMEPLQKALDIAREDNRKLAMSLEQALQTNNHLQTKLDHVQEKLENKEQELQNLETFKERMNEESKMEAELHAERIEALRKQFQTERETAKKAAQREMTELKKALDEANFRSVEVSRTNRELRQKLTELEKMLNSSKEKIKNQKAQIKLHLSAKANNVQNMERMKQIETELRQMELIKDQYQKKNYEQSLSIQKFVSEMTNLQKEMQLLAKSQYDTSARNKQQELRLELERKVRQELEHRCQELEETVRHLKKCKEATENKLKEASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEEDQDKSHDNMSSQSALHRWENKQNLRLVPKKCHSELEKK", "length": 769, "header": "tr|A0A287B1E8-1|A0A287B1E8_PIG Computationally mapped isoform of Coiled-coil domain containing 150 OS=Sus scrofa OX=9823 GN=CCDC150 PE=4 SV=2 CANONICAL=F1SN13-1" }, "locus": { "chromosome": "15", "start_pos": 100634351, "end_pos": 100565830, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063572.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063572.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000050052.2", "url": "https://www.ensembl.org/id/ENSSSCP00000050052.2" } ] } }, { "isoform_ac": "A0A4X1VFG1-1", "url": "https://www.uniprot.org/uniprotkb/F1SN13/entry#A0A4X1VFG1-1", "sequence": { "sequence": "MPPRKKKSPERPASSKFLESYRPHVNYVKERTSSLGLPSVIPNPVRRVTFAPTLTSVRASQETGDSRISLKTLLNAIKTMEGRLEGKIDILASRPLLDDESSNFLNRDSVKSILEKNEEELSRAVKGRDAALKESQKLKGDLEALEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERALNQQRVQKLEAEVDQWQARMLVVDAQHNSEMEPLQKALDIAREDNRKLAMSLEQALQTNNHLQTKLDHVQEKLENKEQELQNLETFKERMNEESKMEAELHAERIEALRKQFQTERETAKKAAQREMTELKKALDEANFRSVEVSRTNRELRQKLTELEKMLNSSKEKIKNQKAQIKLHLSAKANNVQNMERMKQIETELRQMELIKDQYQKKNYEQSLSIQKFVSEMTNLQKEMQLLAKSQYDTSARNKQQELRLELERKVRQELEHRCQELEETVRHLKKCKEATENKLKEASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEEDQDKSHDNMSSQSALHRWENKQNLRLVPKKCHSELEKK", "length": 588, "header": "tr|A0A4X1VFG1-1|F1SN13_PIG Computationally mapped isoform of Coiled-coil domain containing 150 OS=Sus scrofa OX=9823 GN=CCDC150 PE=4 SV=1 CANONICAL=F1SN13-1" }, "locus": { "chromosome": "15", "start_pos": 100634351, "end_pos": 100599867, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090241.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090241.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070945.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070945.1" } ] } }, { "isoform_ac": "F1SN13-1", "url": "https://www.uniprot.org/uniprotkb/F1SN13/entry#F1SN13-1", "sequence": { "sequence": "MDCAMHMETTVSRPVISPTHINATASETFTVLQQRMRIVEEQTSSLRDDLIMLDFGEKRGQLETPECLEQPVSQSIISPIQKEIICSGKTDILWKNCEFLVNRMCRLESLIQSLKMNIFRLQTEKELNPQKTAFLKDRLNTIQEEHSRDLKLLQLEVMNLRQQLRDVKEEEDKAQDEVQRLTVTLERASETKKNAAIIEEELKITKRKMNLKIQELRRQLSQEKHLRETLEKSGSAMLLKIQEMASTVEMERKQVQILQQNCIALRNSIQTTQELLAQEQQQKGELETATSQLKSDLVSRDDLISKLVEENKNLQMSFSKEHEENAYLRSEIMSLHEASEKAQALNEQLTRNCSELNSMLQTVRMENTRIIANHQAILQEEQKMMTKTFQEQNLLLDAAHASITSELQTVQNEKTQLQVHLDHLILEHNQCTQKAQDAEKRTAVQKELLESTIVRLRDELEASMQEKNSLLEEKERLQSKVNKAEKEVAQEKSNLEEELAKNKLARQQVENVLGKITESKNKLAYEKGKLQIKVKQLEEQLHSFTETSSQNDHLRKLNKALEGKYAQVKSILEKNEEELSRAVKGRDAALKESQKLKGDLEALEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERALNQQRVQKLEAEVDQWQARMLVVDAQHNSEMEPLQKALDIAREDNRKLAMSLEQALQTNNHLQTKLDHVQEKLENKEQELQNLETFKERMNEESKMEAELHAERIEALRKQFQTERETAKKAAQREMTELKKALDEANFRSVEVSRTNRELRQKLTELEKMLNSSKEKIKNQKAQIKLHLSAKANNVQNMERMKQIETELRQMELIKDQYQKKNYEQSLSIQKFVSEMTNLQKEMQLLAKSQYDTSARNKQQELRLELERKVRQELEHRCQELEETVRHLKKCKEATENKLKEASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEEDQDKSHDNMSSQSALHRWENKQNLRLVPKKCHSELEKK", "length": 1046, "header": "tr|F1SN13-1|F1SN13_PIG Isoform 1 of Coiled-coil domain containing 150 OS=Sus scrofa OX=9823 GN=CCDC150 PE=4 SV=3 CANONICAL=F1SN13-1" }, "locus": { "chromosome": "15", "start_pos": 100634351, "end_pos": 100539595, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017497.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017497.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017025.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017025.3" } ] } }, { "isoform_ac": "I3LHK7-1", "url": "https://www.uniprot.org/uniprotkb/F1SN13/entry#I3LHK7-1", "sequence": { "sequence": "MDCAMHMETTVSRPVISPTHINATASETFTVLQQRMRIVEEQTSSLRDDLIMLDFGEKRGQLETPECLEQPVSQSIISPIQKEIICSGKTDILWKNCEFLVNRMCRLESLIQSLKMNIFRLQTEKELNPQKTAFLKDRLNTIQEEHSRDLKLLQLEVMNLRQQLRDVKEEEDKAQDEKNAAIIEEELKITKRKMNLKIQECCLQLTNESCCTIWETDLKSRKMKVTSTNEYLLRKENHGLGEETCGCLMGGGGSGRDRELGLIRHNLE", "length": 268, "header": "tr|I3LHK7-1|I3LHK7_PIG Computationally mapped isoform of Coiled-coil domain containing 150 OS=Sus scrofa OX=9823 GN=CCDC150 PE=4 SV=3 CANONICAL=F1SN13-1" }, "locus": { "chromosome": "15", "start_pos": 100558757, "end_pos": 100539595, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023088.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023088.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023554.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023554.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VFG1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VFG1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9TFD9-1", "protein_name": "Coiled-coil domain containing 150", "gene_name": "CCDC150", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLQSMGVTELDVHMETTMSRPVLSPTRINATASETFTVLQQRMRIVEEQTSSLRDDLIMLDFGDKRGQLETPECSVSQNITRPIQNEIICSGKTNILWKNCEFLVNRMCRLESLIQSLKMNIFRLQTEKDLNPQKTDFLKERLNTIQEEHSKDLKLLQLEVMNLRQQLRDVKEEEDKAQDEVQRLTATLEIASETKKNAAIIEEELKTTKRKMNLKIQELRRQLSQEKHLRESLEKSGSALLLRIQEMEATVEVERKQVQILQENCIALRSSIQTTQELLAQEQQQKGELETASSQLKSDLVSRDDIISKLVEENKNIQMSFNKEHEGNAYLRSEIVSLHEASEKAQILNDQLTRKCSELSSMLQTVKMENTRIIADHQAILQEEQKMMTQTFQEQNLLLDAAHASITSELQTVQNEKTQLQMHLDHLILEHNQCIQKAQEAEKRATVQKELLESTIARLRGDLEASTQEKKSLLEEKDRLQKEVNKTEKEVAEEKCNLEKELAKNKVDINALTCNVQTLEEKNKQLTDKIASLELEQASSDYHWLAQQQVENVLGKITDSKNKLAYEKGKLQTKVKQLEEQLHSLTETSSQNDHLRKLNKALEGKYAQVKSLLEKNEEELSQAVKGRDAALKESQKLKGDLETLEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERALNQQRVQKLEAEVDQWQARMLVVDAQHNSEMEPLQKALDVAREDNRKLAMSLEQALQTNNHLQTKLDHVQEKLESKELERQNLETFKERMSEESKIEAELHAERIDALRKQFQIERETAKKAAQREVTEMKKALDEANFRSVEVSRTNRELRQKLTELEKLLNSSKEKIKNQRAQIKLHLSAKANNAQNVERMKQIETELRQMELIKDQYQKKNYEQSLSIQKFVSEMTNLQKEMQLLARSQYDTSARNKQQELRLEAERKLRQELENRCQELEETIRHLKKCKEATENKLKEASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWREEDQDKRHNSMSNQSALHRWENKRNRLVPKKCHSEQERK", "length": 1087 }, "evidence": [ { "id": "F1SN13", "url": "https://omabrowser.org/oma/group/F1SN13/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1M7H6-1", "protein_name": "Coiled-coil domain containing 150", "gene_name": "Ccdc150", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METNLLAAGRSYGLVDGLGVHMETTVCRPVLSPTHINATASETFTVLQQKMRIVEEQTSSLRDDLIMLGYGDRRCQLQTSDYLEDPVSQKVTSPIPNEVVCPESRGILWKNYEFLANRMCYLENLIQPLKMNIFHLQTEKDLNPQKAAFLKDQLNTIQGEHFKDLKLLQLEVMNLRQQLKVVKEEEDRAQDEVQRLTATLEIATETKKNAAVIEEELKTTKRKMNLKIQELRRQLAQEEHVRASLEKSASSMLLKVHEMESAVEAERQQVHTLQQKCIDLHSSMQTTQELLAQEQQKSNGLEMTASQLKSDLISRDNLIYKLVEENKSTQMSLKKEHEENTYLKSEVLSLQDISGKAQVLNDQLSKKCSELTSMLKAVKLENSRIIAEHHATLKVEQKMITETFQEQNLLLDTAHASITGELQTVQNDKAQLQMHLDHLILEHNQCLQKAQEAEKRTMAQKELLESTIARLRGELEASMQEKKSLLEKNEWFQREQVNKSEKGVAKEKCNLEKELAESKEDTNVLNQNLQILVEENKHLTDKMASLEHHKATSDYQGFAQQKVEKALEKITESKNKLAYEKGKLQIKVKQLEEQLHTFTETRLHNDHLQRQNKALEVKHAQIKSLLGKNEEELAEAVKCRDAALKESQKLKGDLEALEDRENKKVGNFQKQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERSLNQQRVQKLEAEVDQWQARMLIVEAQHSNEMEPLQKSLDVTREDNRKLAMSLEQALQTNGHLQSKLDHLQEKLESKERERQNLEAFKERVAEESKVEAELHAERIEALRKQFQTERETAKKVSHREVSELKKALDEANFRSVEVSRTNRELRHKATELEKVVNSNKEKLKNQRAQIRMHLSAKANSAQNMERMKQIEMELRQMEIIKDQYQKKNYEQSLSIQRFVSEMNALQKEMEMLAKSQYETSARNKQQELRLVAERKIRQELESRCKDLEDTIRHLRKCKEATENKLKEASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEENQDMRHNIATSQSVLHRWETKQNLGLMPKKYHSDTERKK", "length": 1101 }, "evidence": [ { "id": "F1SN13", "url": "https://omabrowser.org/oma/group/F1SN13/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CDI7-1", "protein_name": "Coiled-coil domain-containing protein 150", "gene_name": "Ccdc150", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METNLLPGGPSYGLLDESGVQMETTVCRPVLSPTHINGTASETFTVLQQKMRIVEEQTSSLRDDLIMLGYGDRRGQLETPNYLEDPASQKAISPIPNEVICPESPGNLWRNYEFLVNRMCYLENLIQSLKMNIFHLQTEKESNPQKTAFLNDQLNIIQGEHSKGLKLLQLEVMNLRQQLKVVKEEEDRAQDEMQRLTATLEIATETKKNAAVIEEELKTTKRKMNLKIQELRRQLAQEKLVRESLETSASSMLLKVQEMGSVVEAERQQVHALQEKCTALHSSMKTTQDLLAQEQRKNEDLGMTISQLKSDLNSRDNLICKLVEENKATQISLKKEHEENIYLKSEILSLQDVSGKAQVLNDQLSKKCSELTSMLQVVKMENSRIIAEHQAILKVEQKMITETFQEQNLLLDAAHASITGELQAVQNEKAQLQIHLDHLILEHNQCLQKSQEAEKRTVVQKELLESTIARLQGELKASLQEKKSLLEKNEWFQREVNKTEKEVAKEKCNLEKELAESKEDINVLNQNLQTLMEENKHLTNKMASLEHHKATSDYQGKVEKALEKITDSKNMLAYEKGKLQTKVKQLEAQLHTFAETMLQKDHLHKLNKALEVKYTQANSELSASKAYLEQTEAHLKEMKSILGKNEEELAQAVKCRDAALKESQKLKGDLKALEDRESKKVGNFQKQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERSLNQQRVQKLEAEVDQWQARMLIVEAQHGSEIEPLQKSLDITREDNRKLAMSLEQALQTNGHLQSKLDHLQEKLESKERERQSLEAFKEQVAEESKVEAELHAERIEALRKQFQTERETAKKASQREVSELKKALDEANFRSVEVSRANRELRHKATELEKVVNSNKEKLKNQRAQIKLHLSAKANNAQNMERMKQIEMELRQMEIIKDQYQKKNYEQSLSIQRFVSEMNTLQKEMELLTKSQYETSARNKQQELRLVAERKMRLELENRCKELEETIRHLKRCKEATENKLKEASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEENQDMMHNVATSQSVLHRWETKQKYHSDTERKK", "length": 1110 }, "evidence": [ { "id": "F1SN13", "url": "https://omabrowser.org/oma/group/F1SN13/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NCX0-1", "protein_name": "Coiled-coil domain-containing protein 150", "gene_name": "CCDC150", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDCKVHMETTVSRPVLSPTHINATASETFTVLQQRMRIVEEQTSSLRDDLIMLDFGEKRGYLEAPDCLEDLDSQKVISPIQNEAICAGKTDILWKNCEFLVNRMCRLESLMQSLKMNIFRLQTEKDLNPQKTAFLKDRLNAIQEEHSKDLKLLHLEVMNLRQQLRAVKEEEDKAQDEVQRLTATLKIASQTKKNAAIIEEELKTTKRKMNLKIQELRRQLAQEKYLRESLEKSASAMLLKIQEMGSTVEVERKQVHILQQNCIALRDSIQSAQELLAQEQKKKEELEIATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAYLRSEIMSLHEASEKAQVLNDQLTKKCSELSCMLQTVTMEKARIIADHQAILQVEQKMMTQTFQEQNLLLDAAHASITNELQTVQNEKTQLQAHLDHLILEHNQCIQKAQDAEKRTAVQKELLESTIARLRGELEASMQEKKSLLEEKERFQREVNKTEKEIVQERCNLEKELAKNKVDINTLTHNLQTLEEENKHLADQMASLELQQVTSDYHGLAQQKVEKITESKNKLAYENGKLQIKVKQLEEQVQSFTDTSLQNDHLRKMNKYLQTKYAQANSELSAKRVHLQQADAHLKEVKSILERSKEELSRTVKCRNAALKESQKLKEDLEAVEDRENKKVGNFQRQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRRDSEIAGLKKERDLNQQRVQKLEAEVDQWQARMLVMEDQHNSEIESLQKALGVAREDNRKLAMSLEQALQTNNHLQTKLDHIQEQLESKELERQNLETFKDRMTEESKVEAELHAERIEALRKQFQTERETTKKVAQREVAELKKALDEANFRSVEVSRTNRELRQKLAELEKILESNKEKIKNQKTQIKLHLSAKANNAQNIERMKQIEKELKQMELIKDQYQKKNYEQSLSIQRFVCEMTNLQKEMQMLAKSQYDASVRNKQQELHLEAERKIRQELENRCQELEETVRHLKKCKEATENTLKEASVESEQITANLEEAHRWFKHRFDGLQLELTKNRLQRPSGEDRWQEKDQDVKHDVMSNQSVLHRWERKQNLRPMPKKYHSEVQRK", "length": 1101 }, "evidence": [ { "id": "F1SN13", "url": "https://omabrowser.org/oma/group/F1SN13/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1016, "end_pos": 1018, "annotation": "n_glycosylation_sequon" }, { "start_pos": 22, "end_pos": 24, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" }, { "start_pos": 831, "end_pos": 833, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1016, "end_pos": 1018 }, { "start_pos": 22, "end_pos": 24 }, { "start_pos": 352, "end_pos": 354 }, { "start_pos": 831, "end_pos": 833 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F2Z5V6-1", "uniprot_ac": "F2Z5V6", "uniprot_id": "F2Z5V6_PIG", "mass": { "chemical_mass": 20528.0, "monoisotopic_mass": 20528.0 }, "refseq": {}, "gene_names": [ { "name": "MYL12A", "type": "recommended", "evidence": [ { "id": "F2Z5V6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5V6" } ] } ], "protein_names": [ { "name": "Myosin light chain 12A", "type": "synonym", "evidence": [ { "id": "F2Z5V6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5V6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F2Z5V6", "url": "https://www.uniprot.org/uniprotkb/F2Z5V6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MYL12A", "url": "https://www.uniprot.org/uniprotkb/F2Z5V6", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000003691", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003691", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00051", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00051", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015070", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015070", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050403", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050403", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:733637", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:733637", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WIPEDYL", "url": "https://omabrowser.org/oma/group/WIPEDYL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VQ69", "url": "https://www.orthodb.org/?gene=A0A4X1VQ69", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F2Z5V6", "url": "https://www.orthodb.org/?gene=F2Z5V6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23049", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23049", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08976", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08976", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13499", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13499", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1VQ69", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ69", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VQ69-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VQ69-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5V6", "url": "https://www.uniprot.org/uniprotkb/F2Z5V6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5V6-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5V6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLTTTMSSKRAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD", "length": 178, "header": "tr|F2Z5V6-1|F2Z5V6_PIG Isoform 1 of Myosin light chain 12A OS=Sus scrofa OX=9823 GN=MYL12A PE=4 SV=2 CANONICAL=F2Z5V6-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VQ69-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5V6/entry#A0A4X1VQ69-1", "sequence": { "sequence": "MSSKRAKTKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLDAMMNEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEATGTIQEDYLRELLTTMGDRFTDEEVDELYREAPIDKKGNFNYIEFTRILKHGAKDKDD", "length": 172, "header": "tr|A0A4X1VQ69-1|F2Z5V6_PIG Computationally mapped isoform of Myosin light chain 12A OS=Sus scrofa OX=9823 GN=MYL12A PE=4 SV=1 CANONICAL=F2Z5V6-1" }, "locus": { "chromosome": "6", "start_pos": 103419216, "end_pos": 103414513, "strand": "+", 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L6K6-1", "uniprot_ac": "I3L6K6", "uniprot_id": "I3L6K6_PIG", "mass": { "chemical_mass": 91118.0, "monoisotopic_mass": 91118.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF711", "type": "recommended", "evidence": [ { "id": "I3L6K6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ] } ], "protein_names": [ { "name": "Zinc finger protein 711", "type": "recommended", "evidence": [ { "id": "I3L6K6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6K6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Transcription regulator required for brain development. Probably acts as a transcription factor that binds to the promoter of target genes and recruits PHF8 histone demethylase, leading to activated expression of genes involved in neuron development, such as KDM5C. May compete with transcription factor ARX for activation of expression of KDM5C.", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6#function" }, { "database": "UniProtKB", "id": "ARBA00059295", "url": "https://www.uniprot.org/uniprotkb/ARBA00059295#function" }, { "database": "UniProtKB", "id": "A0A287AGP9", "url": "https://www.uniprot.org/uniprotkb/A0A287AGP9#function" }, { "database": "UniProtKB", "id": "A0A4X1W2G8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2G8#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF711", "url": "https://www.uniprot.org/uniprotkb/I3L6K6", "locus": { "chromosome": "X", "start_pos": 68499321, "end_pos": 68475636, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021601", "url": "https://www.ensembl.org/id/ENSSSCG00000021601" } ] } } ], "crossref": [ { "id": "I3L6K6", "url": "https://alphafold.ebi.ac.uk/entry/I3L6K6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021601", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021601", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100152061", "url": "https://www.ncbi.nlm.nih.gov/gene/100152061", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006794", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006794", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050826", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050826", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24377", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24377", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24384", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24384", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24384:SF189", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24384:SF189", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394:SF29", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394:SF29", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04704", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04704", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AGP9", "url": "https://www.uniprot.org/uniprotkb/A0A287AGP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AGP9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGP9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W2G8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2G8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W2G8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2G8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6K6-1", "url": "https://www.uniprot.org/uniprotkb/I3L6K6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSGGGSLGLHTSDSRMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEEDLEEDDGDHILTSELITETVRVPEQVFVADLVTGPDGHLEHVVQDCVSGVDSPTMVSEEVLVTNSDTETVIQAAGVPGSTVTIKTEDDDDDDVKSTSEDYLMISLDDVGEKLEHMGNTPLKIGSDGSQEDVKEDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESEYTSGHSVAGVLDQSRMQREKMVYMAVKDSSQEEDDISCAEIADEVYMEVIVGEEEGTSLPETQLEDSDVNKTIVSVVWAAAYGDERRVSRRYEDCQSSGNTLDSTLENRSSTAAQYLQICDSVNTNKVLKQKAKKRRRGETRQWQTAVIIGPDGQPLTVYPCHICTKKFKSRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKHGNNLPYKCEHCPQAFGDEKELQRHLDLFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCDKGFHRPSELKKHSDIHKGRKIHQCRHCDFKTSDPFILSGHILSVHTKDQSLKCKRCKRGFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEALM", "length": 806, "header": "tr|I3L6K6-1|I3L6K6_PIG Isoform 1 of Zinc finger protein 711 OS=Sus scrofa OX=9823 GN=ZNF711 PE=3 SV=4 CANONICAL=I3L6K6-1" }, "isoforms": [ { "isoform_ac": "A0A287AGP9-1", "url": "https://www.uniprot.org/uniprotkb/I3L6K6/entry#A0A287AGP9-1", "sequence": { "sequence": "MDSGGGSLGLHTSDSRMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEEDLEEDDGDHILTSELITETVRVPEQVFVADLVTGPDGHLEHVVQDCVSGVDSPTMVSEEVLVTNSDTETVIQAAGVPGSTVTIKTEDDDDDDDDDDDDDDVKSTSEDYLMISLDDVGEKLEHMGNTPLKIGSDGSQEDVKEGGTEIVTESEYTSGHSVAGVLDQSRMQREKMVYMAVKDSSQEEDDIRDERRVSRRYEDCQSSGNTLDSTLENRSSTAAQYLQICDSVNTNKVLKQKAKKRRRGETRQWQTAVIIGPDGQPLTVYPCHICTKKFKSRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKHGNNLPYKCEHCPQAFGDEKELQRHLDLFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCDKGFHRPSELKKHSDIHKGRKIHQCRHCDFKTSDPFILSGHILSVHTKDQSLKCKRCKRGFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEALM", "length": 745, "header": "tr|A0A287AGP9-1|A0A287AGP9_PIG Computationally mapped isoform of Zinc finger protein 711 OS=Sus scrofa OX=9823 GN=ZNF711 PE=3 SV=3 CANONICAL=I3L6K6-1" }, "locus": { "chromosome": "X", "start_pos": 68497816, "end_pos": 68479366, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059957.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059957.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043027.3", "url": "https://www.ensembl.org/id/ENSSSCP00000043027.3" } ] } }, { "isoform_ac": "A0A4X1W2G8-1", "url": "https://www.uniprot.org/uniprotkb/I3L6K6/entry#A0A4X1W2G8-1", "sequence": { "sequence": "MDSGGGSLGLHTSDSRMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEEDLEEDDGDHILTSELITETVRVPEQVFVADLVTGPDGHLEHVVQDCVSGVDSPTMVSEEVLVTNSDTETVIQAAGVPGSTVTIKTEDDDDDDDDDDDDDDVKSTSEDYLMISLDDVGEKLEHMGNTPLKIGSDGSQEDVKEDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESEYTSGHSVAGVLDQSRMQREKMVYMAVKDSSQEEDDIRDERRVSRRYEDCQSSGNTLDSTLENRSSTAAQYLQICDSVNTNKVLKQKAKKRRRGETRQWQTAVIIGPDGQPLTVYPCHICTKKFKSRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKHGNNLPYKCEHCPQAFGDEKELQRHLDLFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCDKGFHRPSELKKHSDIHKGRKIHQCRHCDFKTSDPFILSGHILSVHTKDQSLKCKRCKRGFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEALM", "length": 768, "header": "tr|A0A4X1W2G8-1|I3L6K6_PIG Computationally mapped isoform of Zinc finger protein 711 OS=Sus scrofa OX=9823 GN=ZNF711 PE=3 SV=1 CANONICAL=I3L6K6-1" }, "locus": { "chromosome": "X", "start_pos": 68497816, "end_pos": 68479366, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051424.3", "url": "https://www.ensembl.org/id/ENSSSCT00000051424.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049004.1", "url": "https://www.ensembl.org/id/ENSSSCP00000049004.1" } ] } }, { "isoform_ac": "I3L6K6-1", "url": "https://www.uniprot.org/uniprotkb/I3L6K6/entry#I3L6K6-1", "sequence": { "sequence": "MDSGGGSLGLHTSDSRMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEEDLEEDDGDHILTSELITETVRVPEQVFVADLVTGPDGHLEHVVQDCVSGVDSPTMVSEEVLVTNSDTETVIQAAGVPGSTVTIKTEDDDDDDVKSTSEDYLMISLDDVGEKLEHMGNTPLKIGSDGSQEDVKEDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESEYTSGHSVAGVLDQSRMQREKMVYMAVKDSSQEEDDISCAEIADEVYMEVIVGEEEGTSLPETQLEDSDVNKTIVSVVWAAAYGDERRVSRRYEDCQSSGNTLDSTLENRSSTAAQYLQICDSVNTNKVLKQKAKKRRRGETRQWQTAVIIGPDGQPLTVYPCHICTKKFKSRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQYCVFRCADQSNLKTHIKSKHGNNLPYKCEHCPQAFGDEKELQRHLDLFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCDKGFHRPSELKKHSDIHKGRKIHQCRHCDFKTSDPFILSGHILSVHTKDQSLKCKRCKRGFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEALM", "length": 806, "header": "tr|I3L6K6-1|I3L6K6_PIG Isoform 1 of Zinc finger protein 711 OS=Sus scrofa OX=9823 GN=ZNF711 PE=3 SV=4 CANONICAL=I3L6K6-1" }, "locus": { "chromosome": "X", "start_pos": 68497816, "end_pos": 68479366, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025975.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025975.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019657.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019657.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W2G8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W2G8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045944", "evidence": [ { "database": "UniProtKB", "id": "I3L6K6", "url": "https://www.uniprot.org/uniprotkb/I3L6K6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 338, "end_pos": 340, "annotation": "n_glycosylation_sequon" }, { "start_pos": 376, "end_pos": 378, "annotation": "n_glycosylation_sequon" }, { "start_pos": 646, "end_pos": 648, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], 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like A OS=Sus scrofa OX=9823 GN=FCRLA PE=4 SV=1 CANONICAL=I3L9P5-1" }, "locus": { "chromosome": "4", "start_pos": 88855232, "end_pos": 88846972, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091333.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091333.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067515.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067515.1" } ] } }, { "isoform_ac": "A0A5G2RFN0-1", "url": "https://www.uniprot.org/uniprotkb/I3L9P5/entry#A0A5G2RFN0-1", "sequence": { "sequence": "MLKKVSVLEAAGDLNTVTMKLGYVLTTGVFSFPPPMLWAAQMLLELFPTPVLRATPSAELREGSPVTLSCQTKLPLQRSAARLFFSFYKDGRRVRSRGPSSEFQIPTASEAHSGSYWCEAATEDNQVWKQSPKLEIKVQSPSSSAAPPILNPAAQKSAAPETTSTERPGPLPPLPTPSSKDPGFSSPLEILDPHLRHQVRELLKQMQDIRDLLGHLVMELRSLSGYLKLEITKGPAEYK", "length": 239, "header": "tr|A0A5G2RFN0-1|A0A5G2RFN0_PIG Computationally mapped isoform of Fc receptor like A OS=Sus scrofa OX=9823 GN=FCRLA PE=4 SV=1 CANONICAL=I3L9P5-1" }, "locus": { "chromosome": "4", "start_pos": 88855286, "end_pos": 88846969, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081153.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081153.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073647.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073647.1" } ] } }, { "isoform_ac": "A0A8D1C5Q3-1", "url": "https://www.uniprot.org/uniprotkb/I3L9P5/entry#A0A8D1C5Q3-1", "sequence": { "sequence": "MLKKVSVLEAAGDLNTVTMKLGYVLTTGVFSFPPPMLWAAQMLLGPSSSAAPPILNPAAQKSAAPETTSTERPGPLPPLPTPSSKDPGFSSPLEILDPHLRHQVRELLKQMQDIRDLLGHLVMELRSLSGYLKLEITKGPAEY", "length": 143, "header": "tr|A0A8D1C5Q3-1|A0A8D1C5Q3_PIG Computationally mapped isoform of Fc receptor like A OS=Sus scrofa OX=9823 GN=FCRLA PE=4 SV=1 CANONICAL=I3L9P5-1" }, "locus": { "chromosome": "4", "start_pos": 88855286, "end_pos": 88846972, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091366.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091366.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068918.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068918.1" } ] } }, { "isoform_ac": "I3L9P5-1", "url": "https://www.uniprot.org/uniprotkb/I3L9P5/entry#I3L9P5-1", "sequence": { "sequence": "MKLGYVLTTGVFSFPPPMLWAAQMLLVAASFSGSLRTMASPAASFDALQCKVPLSSQESRCHMDEDLTDLRDVDFQIKGYTFSEPFHLIVSYDWLILQSSVRPIFEGDPLVLRCQAWQNWPLTQITFYRDGSALGPPGPNREFSIAVAQKADSGHYHCSAVFRSPGPGSLETASSVTITVQELFPTPVLRATPSAELREGSPVTLSCQTKLPLQRSAARLFFSFYKDGRRVRSRGPSSEFQIPTASEAHSGSYWCEAATEDNQVWKQSPKLEIKVQSPSSSAAPPILNPAAQKSAAPETTSTERPGPLPPLPTPSSKDPGFSSPLEILDPHLRHQVRELLKQMQDIRDLLGHLVMELRSLSGYLKLEITKGPAEYK", "length": 376, "header": "tr|I3L9P5-1|I3L9P5_PIG Isoform 1 of Fc receptor like A OS=Sus scrofa OX=9823 GN=FCRLA PE=4 SV=3 CANONICAL=I3L9P5-1" }, "locus": { "chromosome": "4", "start_pos": 88855232, "end_pos": 88846969, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024613.4", 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"MDTEDIGSGKLGQILKQIWRQNVMLKQALLGEDHCEGAGGATWIATVVFLGQGLSRALHQLLEHIAGTLRSTCQQLCVLLDKENHCTWTQEIVTFRECLMKINEYLGGTAAFLKKEEKEMCNLCGMHDECAPQQTMSAIQDIKATDIAAREEQNVIETATVSPTSREESHYPNQVQLKKNKTYRSSELVEKENNTSLNGDVTGQEESQNKMFPDNTENENDKQTEHMTVENINGNRRETHDIIQTTEREIQETSESQREEMIISSITCDITNKYVTSLLPSDPESLKQKENIMEKEYLDVLNDNTLPQVSCYITAPSSVLQHLECRIINSMSSLVVSDNEELVSNVITVECSEMEKRIPFPICIAIPFTARYRGNYRDIMVKVSDINFQSSYLTPNSLEGMRGSYKGTYAEVKVYKLGIFSVVSCLKKESFTVTKKGLTLKPSMDSRISLNYPPGVFSSPVLIQLKVQPIDPSLVAYLKTQQDISYSVLSTSPVIHIQHPSTHPFQKPVTVFLPCSPHPDKKNLGSEVDHKGRASTTANRIIPLYLNWTKRTSIRKPGNTCESLKLLGFRSRDSGWFVLDGVMVRTTQSGLISFELCEHLERFIVLRLSSIMENSHLLSFVKSLEEAMFSTTACIVLYHQKDNPHRVVILVVPSKDLNQELRHLRLGGLSGPPEPSRHFQVKEGEQLLLRFTGNIFASSNGKDYGKDYKLIFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIIVYKVPKEKIVHNSDQCLILNENNYQLPICKLPLRLPKHENLINRPQSTKRISTDPLEALWNSLLYWLSEELSEENALCLSASLPLRRSTVQLIKLKAPNDLAEQTYELLCFWKRSLPNSTDKLRLLARHLRKIGRSDLSGELKFKWENKVFTEPPRWSDGAEESPVAPSALEEGL", "length": 918, "header": "tr|I3L9X6-1|I3L9X6_PIG Isoform 1 of Death domain containing 1 OS=Sus scrofa OX=9823 GN=DTHD1 PE=4 SV=2 CANONICAL=I3L9X6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q9E0-1", "url": "https://www.uniprot.org/uniprotkb/I3L9X6/entry#A0A5G2Q9E0-1", "sequence": { "sequence": "MYLDTRYLDVLNDNTLPQVSCYITAPSSVLQHLECRIINSMSSLVVSDNEELVSNVITVECSEMEKRIPFPICIAIPFTARYRGNYRDIMVKVSDINFQSSYLTPNSLEGMRGSYKGTYAEVKVYKLGIFSVVSCLKKESFTVTKKGLTLKPSMDSRISLNYPPGVFSSPVLIQLKVQPIDPSLVAYLKTQQDISYSVLSTSPVIHIQHPSTHPFQKPVTVFLPCSPHPDKKNLGSEVDHKGRASTTANRIIPLYLNWTKRTSIRKPGNTCESLKLLGFRSRDSGWFVLDGVMVRTTQSGLISFELCEHLERFIVLRLSSIMENSHLLSFVKSLEEAMFSTTACIVLYHQKDNPHRVVILVVPSKDLNQELRHLRLGGLSGPPEPSRHFQVKEGEQLLLRFTGNIFASSNGKDYGKDYKLIFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIIVYKVPKEKIVHNSDQCLILNENNYQLPICKLPLRLPKHENLINRPQSTKRISTDPLEALWNSLLYWLSEELSEENALCLSASLPLRRSTVQLIKLKAPNDLAEQTYELLCFWKRSLPNSTDKLRLLARHLRKIGRSDLSGELKFKWENKVFTEPPRWSDGAEESPVAPSALEEGL", "length": 628, "header": "tr|A0A5G2Q9E0-1|I3L9X6_PIG Computationally mapped isoform of Death domain containing 1 OS=Sus scrofa OX=9823 GN=DTHD1 PE=4 SV=2 CANONICAL=I3L9X6-1" }, "locus": { "chromosome": "8", "start_pos": 28072198, "end_pos": 27998780, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091155.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091155.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060557.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060557.1" } ] } }, { "isoform_ac": "I3L9X6-1", "url": "https://www.uniprot.org/uniprotkb/I3L9X6/entry#I3L9X6-1", "sequence": { "sequence": "MDTEDIGSGKLGQILKQIWRQNVMLKQALLGEDHCEGAGGATWIATVVFLGQGLSRALHQLLEHIAGTLRSTCQQLCVLLDKENHCTWTQEIVTFRECLMKINEYLGGTAAFLKKEEKEMCNLCGMHDECAPQQTMSAIQDIKATDIAAREEQNVIETATVSPTSREESHYPNQVQLKKNKTYRSSELVEKENNTSLNGDVTGQEESQNKMFPDNTENENDKQTEHMTVENINGNRRETHDIIQTTEREIQETSESQREEMIISSITCDITNKYVTSLLPSDPESLKQKENIMEKEYLDVLNDNTLPQVSCYITAPSSVLQHLECRIINSMSSLVVSDNEELVSNVITVECSEMEKRIPFPICIAIPFTARYRGNYRDIMVKVSDINFQSSYLTPNSLEGMRGSYKGTYAEVKVYKLGIFSVVSCLKKESFTVTKKGLTLKPSMDSRISLNYPPGVFSSPVLIQLKVQPIDPSLVAYLKTQQDISYSVLSTSPVIHIQHPSTHPFQKPVTVFLPCSPHPDKKNLGSEVDHKGRASTTANRIIPLYLNWTKRTSIRKPGNTCESLKLLGFRSRDSGWFVLDGVMVRTTQSGLISFELCEHLERFIVLRLSSIMENSHLLSFVKSLEEAMFSTTACIVLYHQKDNPHRVVILVVPSKDLNQELRHLRLGGLSGPPEPSRHFQVKEGEQLLLRFTGNIFASSNGKDYGKDYKLIFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIIVYKVPKEKIVHNSDQCLILNENNYQLPICKLPLRLPKHENLINRPQSTKRISTDPLEALWNSLLYWLSEELSEENALCLSASLPLRRSTVQLIKLKAPNDLAEQTYELLCFWKRSLPNSTDKLRLLARHLRKIGRSDLSGELKFKWENKVFTEPPRWSDGAEESPVAPSALEEGL", "length": 918, "header": "tr|I3L9X6-1|I3L9X6_PIG Isoform 1 of Death domain containing 1 OS=Sus scrofa OX=9823 GN=DTHD1 PE=4 SV=2 CANONICAL=I3L9X6-1" }, "locus": { "chromosome": "8", "start_pos": 28072198, "end_pos": 27998526, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028675.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028675.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020840.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020840.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q9E0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q9E0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521908", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521908", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E9PZX1-1", "protein_name": "Death domain containing 1", "gene_name": "Dthd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLKKEEKEMCNLCSMHEDRTPQQTISAIQDTKATDIAPRRELNVMETATVASTNAGESHSTNQVQLTENKTQINSDLGKKENNDPLSGNVIGQEESQSTVFPDNAENEDEKQIEHVTAENINGNKKDIHDAIQTTAREIQETSKSQREKITTSPTAWDVSSKDMNNLYNESESLKQKSNIMEKEYLAVLSDGTDPQVSCYVTAPLHVLQWFDCQITNDMSSFIVSDNEELVSNVITVECSDKDKEIPFPICITIPFKACYKGNYRDIMVKMSDRNFQSSYLIPNLLERMRGSCKGTCASVYVYKLGMFSVVSCLKKQSFTVTKKGLTWKSSMDARISFSYPAGVFTSPVLVQLKIQPVDPSLVSYLKAHQDPSYSVMSTSPLICIQHPSTHPFQKPVTVFLPCSPLPEKKNLESEKDHRRPESATVHRSLQTPSYFNRSKSPSLRKPGNSACETLKLLGFRSRDSGWFGIDDVVVRTVQSGLVSFELCEHLERFIVLNLSSPVDNSLLVSFVKSLEEASLSTTACIVLSHQKDNPHRVVILVVPSKELSLVLKSLRSEGFGGPESSRQFQVREGEQLLLRFTGNIFGSSNGKDYEKDYKLIFHLQRKPRLELHIKEVDEFGNYSCPHYKGTITVYKVPREKIVPNLDQTLHETFYQFPVCKLPLKLPKHEKVINRPQSTKRVSTDPLVALWDNLLHWLAEELAEEGAEVLAASLPLRRSTVQLIKLKHPDDPTEQIHELLCFWKRSLPTSTDKIRLLARHLRKMGRGDLTEELKFKWEHKVFTEPQSWFDVATE", "length": 795 }, "evidence": [ { "id": "I3L9X6", "url": "https://omabrowser.org/oma/group/I3L9X6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMT9-1", "protein_name": "Death domain-containing protein 1", "gene_name": "DTHD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MHDECTPQQTMSSIQDTKAADIAARGELNVIETATVSPTNGEESHYTNQVQLEKNKTHMSSALVEKENNTSLNGRVLGQEESQNKMFPDNAENEDDKQIEHMTVENINGNREETHGIIQTTETEIQETSESPREEMTTSSIICDISKKYINSTLPNDSENIKHKNNIMEKEYLDVLSDVTGPQVSCYITAPSYVLQQLECRIINHMSSLIVGDNEELVSNVITIECSDKEKRVPFPIGIAIPFTARYRGNYRDIMVKVCDINLQSSYLNPNSLEGMKGGYKGTCASVKVYKLGIFSVVSCLKKESFTVTKKGLALKSSMDSRISLNYPPGVFTSPVLVQLKIQPVDPALVAHLKAQQDTFYSVQSTSPLIHIQHPSTYPFQKPVTLFLPCSPYLDKNNLGSEIDHKRRASATINRITPSYFNRTKIASIRKPRKNASECLKLLGFRSQDSGWCGLDDVVKTIQSGLVSVELYEHLERFIVLHLSSTMDNSHLVTFVKSLEEAMLSTTACIVLSHQKDNPHRIAVLVVPSKDLSQVLKDLHLEGFGGPPEPSRHFQVREGEQLLLRFTGNIFASSNGKDYGKDYTLIFHLQRKPRLELQIKEVDEFGNYSCPHYKGTIVVYKVPKGKIVPNLNQSLVINENHSQLPICKLPLKLPKHKKLINRPQSTKRVSKDPVEALWDNLLHWLAEELSEENAESLSSTLPLRRSTIQLIKLKNPDDLTEQIHEFLCFWKKSLPTFTDKLRLLARHLRKIGRSDLAEELKFKWENKVFTEPQQCFDVAPE", "length": 781 }, "evidence": [ { "id": "I3L9X6", "url": "https://omabrowser.org/oma/group/I3L9X6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3L9X6", "url": "https://www.uniprot.org/uniprotkb/I3L9X6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" }, { "start_pos": 193, "end_pos": 195, "annotation": "n_glycosylation_sequon" }, { "start_pos": 194, "end_pos": 196, "annotation": "n_glycosylation_sequon" }, { "start_pos": 547, "end_pos": 549, "annotation": "n_glycosylation_sequon" }, { "start_pos": 732, "end_pos": 734, "annotation": "n_glycosylation_sequon" }, { "start_pos": 861, "end_pos": 863, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L9X6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9X6" }, { "id": "PS50017", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50017" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Death", "eco_id": "ECO_0000259", "start_pos": 822, "end_pos": 886, "start_aa": "Leu", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L9X6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9X6" }, { "id": "PS51145", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51145" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ZU5", "eco_id": "ECO_0000259", "start_pos": 427, "end_pos": 598, "start_aa": "Lys", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 180, "end_pos": 182 }, { "start_pos": 193, "end_pos": 195 }, { "start_pos": 194, "end_pos": 196 }, { "start_pos": 547, "end_pos": 549 }, { "start_pos": 732, "end_pos": 734 }, { "start_pos": 861, "end_pos": 863 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQE5-1", "uniprot_ac": "F1SQE5", "uniprot_id": "F1SQE5_PIG", "mass": { "chemical_mass": 93366.0, "monoisotopic_mass": 93366.0 }, "refseq": {}, "gene_names": [ { "name": "TTLL3", "type": "recommended", "evidence": [ { "id": "F1SQE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ] } ], "protein_names": [ { "name": "Actin related protein 2/3 complex subunit 4", "type": "synonym", "evidence": [ { "id": "F1SQE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Actin-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA. The Arp2/3 complex promotes homologous recombination (HR) repair in response to DNA damage by promoting nuclear actin polymerization, leading to drive motility of double-strand breaks (DSBs).", "evidence": [ { "database": "UniProtKB", "id": "A0A5K1VDV6", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VDV6#function" }, { "database": "UniProtKB", "id": "ARBA00060055", "url": "https://www.uniprot.org/uniprotkb/ARBA00060055#function" }, { "database": "UniProtKB", "id": "A0A5G2REK8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REK8#function" }, { "database": "UniProtKB", "id": "A0A8W4FP97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP97#function" }, { "database": "UniProtKB", "id": "A0A5G2QAE1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAE1#function" }, { "database": "UniProtKB", "id": "A0A5G2QG21", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG21#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TTLL3", "url": "https://www.uniprot.org/uniprotkb/F1SQE5", "locus": { "chromosome": "13", "start_pos": 66123977, "end_pos": 66056890, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011552", "url": "https://www.ensembl.org/id/ENSSSCG00000011552" } ] } } ], "crossref": [ { "id": "F1SQE5", "url": "https://alphafold.ebi.ac.uk/entry/F1SQE5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011552", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011552", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "ENSSSCG00000011553", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011553", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR004344", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004344", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008384", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008384", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034666", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034666", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051437", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051437", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR22629", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22629", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22629:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22629:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45870", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45870", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45870:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45870:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03133", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03133", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05856", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05856", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8955332", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8955332", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "67180", "url": "https://www.rhea-db.org/rhea/67180", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZXR9", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXR9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZXR9-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZXR9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAE1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAE1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAE1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAE1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG21", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG21", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG21-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG21-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2REK8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REK8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2REK8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2REK8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RM86", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RM86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RM86-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RM86-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VDV6", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VDV6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5K1VDV6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5K1VDV6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FP97", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FP97-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP97-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQE5-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQVSGATQLLSTGEPGATHLGFTACYGRDRGPVGSWPRRPQPPESRTSSPASWPWSRHSELRLPEEAAAGCQSWEGSLALARLLGCALESSPDRSHAQGAAEPRPRGPSPTKTQEDATPPPDGSLVLWRGFSKASQYMGRLRNAKIHVERAVKQKKVFMIQGRYPVIRCLLRRRGWVEKKMVHHLGNNLPPSQKDLDSSVMGDSDTTEDEDEDEVEAFRPAQLFTFDDILEFDDLHGTHALMSRMVRNEVPYFIWTTRRDVLDCRLLSKDQMINHYARAGSFTTKVGLCLNLRNLLWFDEADADSFFPRCYCLGAEDDKKAFIEDFWLTAARNVLKLVVKSEWKSYSIQAEEEEAPGDKQLKKQEKKTVTVSPEFVDEALCVCEEHLSNLAHVDIDKDLEAPLYLSPEGWSLFLQRYYQVVHEGAELRHLDTQVQRCEDILQQLRAVVPQMDMEGDCNIWIVKPGAKSRGRGIVCMDHLEEMLKLVDSNPMMMKDGKWVVQKYIERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQRHLENSCHRHPLLPSDNMWSSKKFQAHLQEIGAPNAWSTIIVPGMKAAVIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQADTLRVVIDRRLDRSCDTGAFELIYKQPAVEVPQYVGIRLLVEGSTIKKPLAMCHQRTAVRPALSHLLTQRGSGEASYHFPSLHSKGRLPSPHVLQPQGQVLRLQHSKLVGSEALSTTGKALMTLPTAKVLISLPPNPELKLPSNALKPREVGFEL", "length": 827, "header": "tr|F1SQE5-1|F1SQE5_PIG Isoform 1 of Actin related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=4 SV=4 CANONICAL=F1SQE5-1" }, "isoforms": [ { "isoform_ac": "A0A286ZXR9-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#A0A286ZXR9-1", "sequence": { "sequence": "MVQSGRPGGDCGCASRERAGVAGLATSVLPLSGPASARDELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF", "length": 163, "header": "tr|A0A286ZXR9-1|A0A286ZXR9_PIG Computationally mapped isoform of Actin related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=1 SV=2 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66092289, "end_pos": 66080384, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064812.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064812.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036314.3", "url": "https://www.ensembl.org/id/ENSSSCP00000036314.3" } ] } }, { "isoform_ac": "A0A5G2QAE1-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#A0A5G2QAE1-1", "sequence": { "sequence": "MGFAGVTCLPHYPQNFCREDEVLFWTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNVSEGPSCFPSRSRKTSGLC", "length": 210, "header": "tr|A0A5G2QAE1-1|F1SQE5_PIG Computationally mapped isoform of Actin related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=4 SV=2 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66089710, "end_pos": 66057007, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082283.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082283.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060971.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060971.2" } ] } }, { "isoform_ac": "A0A5G2QG21-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#A0A5G2QG21-1", "sequence": { "sequence": "TCVLVDASQTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNVSEGPSCFPSRSRKTSGLC", "length": 194, "header": "tr|A0A5G2QG21-1|F1SQE5_PIG Computationally mapped isoform of Actin related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=4 SV=2 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66089710, "end_pos": 66081714, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073715.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073715.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063193.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063193.2" } ] } }, { "isoform_ac": "A0A5G2REK8-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#A0A5G2REK8-1", "sequence": { "sequence": "MVTSWIHCCCTTIGIPLLANFKAPRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNVSEGPSCFPSRSRKTSGLC", "length": 170, "header": "tr|A0A5G2REK8-1|A0A5G2REK8_PIG Computationally mapped isoform of Actin-related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=1 SV=2 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66089710, "end_pos": 66085291, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072662.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072662.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069322.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069322.2" } ] } }, { "isoform_ac": "A0A5G2RM86-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#A0A5G2RM86-1", "sequence": { "sequence": "MSQIRSDSGLVLHLKQKPGSSPSSRVRNGSQVPVPRWAGRDQVPEREQAWSLGLSRVSPALGAEDFWLTAARNVLKLVVKSEWKSYSIQAEEEEAPGDKQLKKQEKKTVTVSPEFVDEALCVCEEHLSNLAHVDIDKDLEAPLYLSPEGWSLFLQRYYQVVHEGAELRHLDTQVQRCEDILQQLRAVVPQMDMEGDCNIWIVKPGAKSRGRGIVCMDHLEEMLKLVDSNPMMMKDGKWVVQKYIERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQRHLENSCHRHPLLPSDNMWSSKKFQAHLQEIGAPNAWSTIIVPGMKAAVIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQADTLRVVIDRRLDRSCDTGAFELIYKQPLTTSPASTARAGCLLPMCSNPRGRSSDCSTASWWALRPCRPQARP", "length": 484, "header": "tr|A0A5G2RM86-1|A0A5G2RM86_PIG Computationally mapped isoform of Actin related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=4 SV=2 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66123392, "end_pos": 66102552, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076080.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076080.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073639.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073639.2" } ] } }, { "isoform_ac": "A0A5K1VDV6-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#A0A5K1VDV6-1", "sequence": { "sequence": "MGLTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNVLLSFGEDSPRRLNTWAGSEMPRSTWRELSRSERVAGRGF", "length": 209, "header": "tr|A0A5K1VDV6-1|A0A5K1VDV6_PIG Computationally mapped isoform of Actin-related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=1 SV=2 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66096512, "end_pos": 66084307, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012642.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012642.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012310.5", "url": "https://www.ensembl.org/id/ENSSSCP00000012310.5" } ] } }, { "isoform_ac": "A0A8W4FP97-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#A0A8W4FP97-1", "sequence": { "sequence": "MAVREDGSKDDKKAKVTSESLTDDGRSLSSDFKLQESKTTTAVLAGKLPKCQVFLASPSPARDIDGTVRTSGRRLRLRFSRKGRRRGAGHFRTSAFRPSQRPRWSSKELLLQPVTISRNEKEKVLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITNFHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNVSEGPSCFPSRSRKTSGLC", "length": 249, "header": "tr|A0A8W4FP97-1|A0A8W4FP97_PIG Computationally mapped isoform of Actin-related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=1 SV=1 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66089710, "end_pos": 66080191, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092385.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092385.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080743.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080743.1" } ] } }, { "isoform_ac": "F1SQE5-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE5/entry#F1SQE5-1", "sequence": { "sequence": "MQVSGATQLLSTGEPGATHLGFTACYGRDRGPVGSWPRRPQPPESRTSSPASWPWSRHSELRLPEEAAAGCQSWEGSLALARLLGCALESSPDRSHAQGAAEPRPRGPSPTKTQEDATPPPDGSLVLWRGFSKASQYMGRLRNAKIHVERAVKQKKVFMIQGRYPVIRCLLRRRGWVEKKMVHHLGNNLPPSQKDLDSSVMGDSDTTEDEDEDEVEAFRPAQLFTFDDILEFDDLHGTHALMSRMVRNEVPYFIWTTRRDVLDCRLLSKDQMINHYARAGSFTTKVGLCLNLRNLLWFDEADADSFFPRCYCLGAEDDKKAFIEDFWLTAARNVLKLVVKSEWKSYSIQAEEEEAPGDKQLKKQEKKTVTVSPEFVDEALCVCEEHLSNLAHVDIDKDLEAPLYLSPEGWSLFLQRYYQVVHEGAELRHLDTQVQRCEDILQQLRAVVPQMDMEGDCNIWIVKPGAKSRGRGIVCMDHLEEMLKLVDSNPMMMKDGKWVVQKYIERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHLCNNSIQRHLENSCHRHPLLPSDNMWSSKKFQAHLQEIGAPNAWSTIIVPGMKAAVIHALQTSQDTVQCRKASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQADTLRVVIDRRLDRSCDTGAFELIYKQPAVEVPQYVGIRLLVEGSTIKKPLAMCHQRTAVRPALSHLLTQRGSGEASYHFPSLHSKGRLPSPHVLQPQGQVLRLQHSKLVGSEALSTTGKALMTLPTAKVLISLPPNPELKLPSNALKPREVGFEL", "length": 827, "header": "tr|F1SQE5-1|F1SQE5_PIG Isoform 1 of Actin related protein 2/3 complex subunit 4 OS=Sus scrofa OX=9823 GN=TTLL3 PE=4 SV=4 CANONICAL=F1SQE5-1" }, "locus": { "chromosome": "13", "start_pos": 66123496, "end_pos": 66095856, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012643.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012643.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012311.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012311.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAE1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAE1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8955332", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8955332", "resource": "Reactome", "description": "Carboxyterminal post-translational modifications of tubulin" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" }, { "name": "protein-glycine ligase activity, initiating", "id": "GO:0070736", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070736", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" }, { "name": "ligase activity", "id": "GO:0016874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016874", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "actin filament polymerization", "id": "GO:0030041", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030041", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" }, { "name": "Arp2/3 complex-mediated actin nucleation", "id": "GO:0034314", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034314", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" }, { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" }, { "name": "flagellated sperm motility", "id": "GO:0030317", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030317", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" }, { "name": "axoneme assembly", "id": "GO:0035082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035082", "evidence": [ { "database": "UniProtKB", "id": "F1SQE5", "url": "https://www.uniprot.org/uniprotkb/F1SQE5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF00884", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1663150", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1663150", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9840310", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9840310", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QBQ3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBQ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QBQ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBQ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4X3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4X3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4X3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4X3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9H5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9H5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9H5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9H5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDG1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDG1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDG1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDG1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGB9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGB9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGB9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGB9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L814", "url": "https://www.uniprot.org/uniprotkb/I3L814", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L814-1", "url": "https://www.uniprot.org/uniprotkb/I3L814-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLHLGSSWSGLALTIGVLLGSKPSAYGDLSASRPNILLLMADDLGIGDLGCYGNHTIRTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGMVSSTGSRVLQWVAASGGLPPNETTFAKILKDKGYVTGLVGKWHLGLNCESSEDHCHHPLNHGFDLFYGMPFSMMGDCLPSDISEKRVILERQVNVCCHIVALAALTLALGKLTRLTPGSWTPVVCSALAAALLFLCSCVLSPLIAHADCFLMRNRTITEQPMRFHRTTALMLREVSSFLKRNKQGPFLLFVSFLHVHSPLITTEPFRGRSLHGRYGDNVEEMDWMVGQVLDVLDTEGLSNGTLVYFSSDHGGSLEAHFGNQQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIQEPTSLMDVFPTVVQLGGGQVPHDRVIDGRDLLPLLLGTVQHSDHEFLMHYCERFLHAARWHQRDRGTVWKVHFVTPVFQPDGAGACYNRMVCPCFGDQVTHHEPPLLFDLSRDPSEAHPLTPDTEPLFHQVVERVKEAVRDHQQTLSPVPLQLDRLDNVWKPWLQPCCGQFPLCWCDREADPQ", "length": 585, "header": "tr|I3L814-1|I3L814_PIG Isoform 1 of Arylsulfatase E (chondrodysplasia punctata 1) OS=Sus scrofa OX=9823 GN=ARSE PE=1 SV=4 CANONICAL=I3L814-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QBQ3-1", "url": "https://www.uniprot.org/uniprotkb/I3L814/entry#A0A5G2QBQ3-1", "sequence": { "sequence": "MCRREFPSWTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGMVSSTGSRVLQWVAASGGLPPNETTFAKILKDKGYVTGLVGKWHLGLNCESSEDHCHHPLNHGFDLFYGMPFSMMGDCLPSDISEKRVILERQVNVCCHIVALAALTLALGKLTRLTPGSWTPVVCSALAAALLFLCSCVLSPLIAHADCFLMRNRTITEQPMRFHRTTALMLREVSSFLKRNKQGPFLLFVSFLHVHSPLITTEPFRGRSLHGRYGDNVEEMDWMVGQVLDVLDTEGLSNGTLVYFSSDHGGSLEAHFGNQQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIQEPTSLMDVFPTVVQLGGGQVPHDRVIDGRDLLPLLLGTVQHSDHEFLMHYCERFLHAARWHQRDRGTVWKVHFVTPVFQPDGAGACYNRMVCPCFGDQVTHHEPPLLFDLSRDPSEAHPLTPDTEPLFHQVVERVKEAVRDHQQTLSPVPLQLDRLDNVWKPWLQPCCGQFPLCWCDREADPQ", "length": 536, "header": "tr|A0A5G2QBQ3-1|I3L814_PIG Computationally mapped isoform of Arylsulfatase E (chondrodysplasia punctata 1) OS=Sus scrofa OX=9823 GN=ARSE PE=1 SV=3 CANONICAL=I3L814-1" }, "locus": { "chromosome": "X", "start_pos": 149291, "end_pos": 131847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071026.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071026.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061933.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061933.2" } ] } }, { "isoform_ac": "A0A5G2R4X3-1", "url": "https://www.uniprot.org/uniprotkb/I3L814/entry#A0A5G2R4X3-1", "sequence": { "sequence": "MLHLGSSWSGLALTIGVLLGSKPSAYGDLSASRPNILLLMADDLGIGDLGCYGNHTIRTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGKWHLGLNCESSEDHCHHPLNHGFDLFYGMPFSMMGDCLPSDISEKRVILERQVNVCCHIVALAALTLALGKLTRLTPGSWTPVVCSALAAALLFLCSCVLSPLIAHADCFLMRNRTITEQPMRFHRTTALMLREVSSFLKRNKQGPFLLFVSFLHVHSPLITTEPFRGRSLHGRYGDNVEEMDWMVGQVLDVLDTEGLSNGTLVYFSSDHGGSLEAHFGNQQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIQEPTSLMDVFPTVVQLGGGQVPHDRVIDGRDLLPLLLGTVQHSDHEFLMHYCERFLHAARWHQRDRGTVWKVHFVTPVFQPDGAGACYNRMVCPCFGDQVTHHEPPLLFDLSRDPSEAHPLTPDTEPLFHQVVERVKEAVRDHQQTLSPVPLQLDRLDNVWKPWLQPCCGQFPLCWCDREADPQ", "length": 544, "header": "tr|A0A5G2R4X3-1|A0A5G2R4X3_PIG Computationally mapped isoform of Arylsulfatase E (chondrodysplasia punctata 1) OS=Sus scrofa OX=9823 GN=ARSE PE=1 SV=2 CANONICAL=I3L814-1" }, "locus": { "chromosome": "X", "start_pos": 151655, "end_pos": 131847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086789.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086789.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069240.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069240.2" } ] } }, { "isoform_ac": "A0A5G2R9H5-1", "url": "https://www.uniprot.org/uniprotkb/I3L814/entry#A0A5G2R9H5-1", "sequence": { "sequence": "EGIPFPSHRAASGLALTIGVLLGSKPSAYGDLSASRPNILLLMADDLGIGDLGCYGNHTIRTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGMVSSTGSRVLQWVAASGGLPPNETTFAKILKDKGYVTGLVGKWHLGLNCESSEDHCHHPLNHGFDLFYGMPFSMMGDCLPSDISEKRVILERQVNVCCHIVALAALTLALGKLTRLTPGSWTPVVCSALAAALLFLCSCVLSPLIAHADCFLMRNRTITEQPMRFHRTTALMLREVSSFLKRNKQGPFLLFVSFLHVHSPLITTEPFRGRSLHGRYGDNVEEMDWMVGQVLDVLDTEGLSNGTLVYFSSDHGGSLEAHFGNQQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIQEPTSLMDVFPTVVQLGGGQVPHDRVIDGRDLLPLLLGTVQHSDHEFLMHYCERFLHAARWHQRDRGTVWKVHFVTPVFQPDGAGACYNRMVCPCFGDQVTHHEPPLLFDLSRDPSEAHPLTPDTEPLFHQVVERVKEAVRDHQQTLSPVPLQLDRLDNVWKPWLQPCCGQFPLCWCDREADPQ", "length": 588, "header": "tr|A0A5G2R9H5-1|A0A5G2R9H5_PIG Computationally mapped isoform of Arylsulfatase E (chondrodysplasia punctata 1) OS=Sus scrofa OX=9823 GN=ARSE PE=1 SV=2 CANONICAL=I3L814-1" }, "locus": { "chromosome": "X", "start_pos": 151454, "end_pos": 131847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078478.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078478.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070779.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070779.2" } ] } }, { "isoform_ac": "A0A8W4FDG1-1", "url": "https://www.uniprot.org/uniprotkb/I3L814/entry#A0A8W4FDG1-1", "sequence": { "sequence": "MLHLGSSWTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGKWHLGLNCESSEDHCHHPLNHGFDLFYGMPFSMMGDCLPSDISEKRVILERQVNVCCHIVALAALTLALGKLTRLTPGSWTPVVCSALAAALLFLCSCVLSPLIAHADCFLMRNRTITEQPMRFHRTTALMLREVSSFLKRNKQGPFLLFVSFLHVHSPLITTEPFRGRSLHGRYGDNVEEMDWMVGQVLDVLDTEGLSNGTLVYFSSDHGGSLEAHFGNQQYGGWNGIYKGGTVWKVHFVTPVFQPDGAGACYNRMVCPCFGDQVTHHEPPLLFDLSRDPSEAHPLTPDTEPLFHQVVERVKEAVRDHQQTLSPVPLQLDRLDNVWKPWLQPCCGQFPLCWCDREADPQ", "length": 399, "header": "tr|A0A8W4FDG1-1|A0A8W4FDG1_PIG Computationally mapped isoform of Arylsulfatase E (chondrodysplasia punctata 1) OS=Sus scrofa OX=9823 GN=ARSE PE=1 SV=1 CANONICAL=I3L814-1" }, "locus": { "chromosome": "X", "start_pos": 151655, "end_pos": 131847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093722.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093722.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077300.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077300.1" } ] } }, { "isoform_ac": "A0A8W4FGB9-1", "url": "https://www.uniprot.org/uniprotkb/I3L814/entry#A0A8W4FGB9-1", "sequence": { "sequence": "KKREDMLHLGSSWTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGMVSSTGSRVLQWVAASGGLPPNETTFAKILKDKGYVTGLVGKWHLGLNCESSEDHCHHPLNHGFDLFYGMPFSMMGDCLPSDISEKRVILERQVNVCCHIVALAALTLALGKLTRLTPGSWTPVVCSALAAALLFLCSCVLSPLIAHADCFLMRNRTITEQPMRFHRTTALMLREVSSFLKRNKQGPFLLFVSFLHVHSPLITTEPFRGRSLHGRYGDNVEEMDWMVGQVLDVLDTEGLSNGTLVYFSSDHGGSLEAHFGNQQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIQEPTSLMDVFPTVVQLGGGQVPHDRVIDGRDLLPLLLGTVQHSDHEFLMHYCERFLHAARWHQRDRGTVWKVHFVTPVFQPDGAGACYNRMVCPCFGDQVTHHEPPLLFDLSRDPSEAHPLTPDTEPLFHQVVERVKEAVRDHQQTLSPVPLQLDRLDNVWKPWLQPCCGQFPLCWCDREADPQ", "length": 540, "header": "tr|A0A8W4FGB9-1|A0A8W4FGB9_PIG Computationally mapped isoform of Arylsulfatase E (chondrodysplasia punctata 1) OS=Sus scrofa OX=9823 GN=ARSE PE=1 SV=1 CANONICAL=I3L814-1" }, "locus": { "chromosome": "X", "start_pos": 151670, "end_pos": 131847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000106009.1", "url": "https://www.ensembl.org/id/ENSSSCT00000106009.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078479.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078479.1" } ] } }, { "isoform_ac": "I3L814-1", "url": "https://www.uniprot.org/uniprotkb/I3L814/entry#I3L814-1", "sequence": { "sequence": "MLHLGSSWSGLALTIGVLLGSKPSAYGDLSASRPNILLLMADDLGIGDLGCYGNHTIRTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGMVSSTGSRVLQWVAASGGLPPNETTFAKILKDKGYVTGLVGKWHLGLNCESSEDHCHHPLNHGFDLFYGMPFSMMGDCLPSDISEKRVILERQVNVCCHIVALAALTLALGKLTRLTPGSWTPVVCSALAAALLFLCSCVLSPLIAHADCFLMRNRTITEQPMRFHRTTALMLREVSSFLKRNKQGPFLLFVSFLHVHSPLITTEPFRGRSLHGRYGDNVEEMDWMVGQVLDVLDTEGLSNGTLVYFSSDHGGSLEAHFGNQQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIQEPTSLMDVFPTVVQLGGGQVPHDRVIDGRDLLPLLLGTVQHSDHEFLMHYCERFLHAARWHQRDRGTVWKVHFVTPVFQPDGAGACYNRMVCPCFGDQVTHHEPPLLFDLSRDPSEAHPLTPDTEPLFHQVVERVKEAVRDHQQTLSPVPLQLDRLDNVWKPWLQPCCGQFPLCWCDREADPQ", "length": 585, "header": "tr|I3L814-1|I3L814_PIG Isoform 1 of Arylsulfatase E (chondrodysplasia punctata 1) OS=Sus scrofa OX=9823 GN=ARSE PE=1 SV=4 CANONICAL=I3L814-1" }, "locus": { "chromosome": "X", "start_pos": 151655, "end_pos": 131847, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025117.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025117.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020172.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020172.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QBQ3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QBQ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-1663150", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1663150", "resource": "Reactome", "description": "The activation of arylsulfatases" }, { "id": "R-SSC-9840310", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9840310", "resource": "Reactome", "description": "Glycosphingolipid catabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "P51690-1", "protein_name": "Arylsulfatase L", "gene_name": "ARSL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLHLHHSCLCFRSWLPAMLAVLLSLAPSASSDISASRPNILLLMADDLGIGDIGCYGNNTMRTPNIDRLAEDGVKLTQHISAASLCTPSRAAFLTGRYPVRSGMVSSIGYRVLQWTGASGGLPTNETTFAKILKEKGYATGLIGKWHLGLNCESASDHCHHPLHHGFDHFYGMPFSLMGDCARWELSEKRVNLEQKLNFLFQVLALVALTLVAGKLTHLIPVSWMPVIWSALSAVLLLASSYFVGALIVHADCFLMRNHTITEQPMCFQRTTPLILQEVASFLKRNKHGPFLLFVSFLHVHIPLITMENFLGKSLHGLYGDNVEEMDWMVGRILDTLDVEGLSNSTLIYFTSDHGGSLENQLGNTQYGGWNGIYKGGKGMGGWEGGIRVPGIFRWPGVLPAGRVIGEPTSLMDVFPTVVRLAGGEVPQDRVIDGQDLLPLLLGTAQHSDHEFLMHYCERFLHAARWHQRDRGTMWKVHFVTPVFQPEGAGACYGRKVCPCFGEKVVHHDPPLLFDLSRDPSETHILTPASEPVFYQVMERVQQAVWEHQRTLSPVPLQLDRLGNIWRPWLQPCCGPFPLCWCLREDDPQ", "length": 589 }, "evidence": [ { "id": "I3L814", "url": "https://omabrowser.org/oma/group/I3L814/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "I3L814", "url": "https://www.uniprot.org/uniprotkb/I3L814" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3L814", "url": "https://www.uniprot.org/uniprotkb/I3L814" } ], "pmid": "" }, { "name": "arylsulfatase activity", "id": "GO:0004065", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004065", "evidence": [ { "database": "UniProtKB", "id": "I3L814", "url": "https://www.uniprot.org/uniprotkb/I3L814" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "I3L814", "url": "https://www.uniprot.org/uniprotkb/I3L814" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3L814", "url": "https://www.uniprot.org/uniprotkb/I3L814" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 121, "end_pos": 123, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 340, "end_pos": 342, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L814", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L814" }, { "id": "PF00884", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00884" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sulfatase N-terminal", "eco_id": "ECO_0000259", "start_pos": 34, "end_pos": 419, "start_aa": "Pro", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 121, "end_pos": 123 }, { "start_pos": 254, "end_pos": 256 }, { "start_pos": 340, "end_pos": 342 }, { "start_pos": 54, "end_pos": 56 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036772", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036772", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WTLPKVM", "url": "https://omabrowser.org/oma/group/WTLPKVM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24252", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24252", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24252:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24252:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00089", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00089", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF09272", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09272", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6806942", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6806942", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8852405", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8852405", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020952810", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020952810", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AX79", "url": "https://www.uniprot.org/uniprotkb/A0A287AX79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AX79-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AX79-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCY8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R148", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R148", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R148-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R148-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6R5-1", "url": "https://www.uniprot.org/uniprotkb/I3L6R5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEKEGGQPVSCCSGPKVAALTVGTVLLLTGIGAASWAIVTVLLRSDQEPLYPVQVGPGDSRLTVFDETEGTWRLLCSSRSNARVAGLSCEEMGFLRSLTHSELDVRTAGANGTSGFFCVDEGRLPQARRLLEVLSVCDCPRGHFLATTCQDCGHRKLPVDRIVGGQDTSLGRWPWQVSLRYDGAHLCGGSLLSKDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGLQMGVQAVIYHGDYLPFRDPNSEENSNDIALVHLSSSLVLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL", "length": 417, "header": "tr|I3L6R5-1|I3L6R5_PIG Isoform 1 of Serine protease hepsin OS=Sus scrofa OX=9823 GN=HPN PE=4 SV=2 CANONICAL=I3L6R5-1" }, "isoforms": [ { "isoform_ac": "A0A287AX79-1", "url": "https://www.uniprot.org/uniprotkb/I3L6R5/entry#A0A287AX79-1", "sequence": { "sequence": "MAEKEGGQPVSCCSGPKVAALTVGTVLLLTGIGAASWAIVQVGPGDSRLTVFDETEGTWRLLCSSRSNARVAGLSCEEMGFLRSLTHSELDVRTAGANGTSGFFCVDEGRLPQARRLLEVLSVCDCPRGHFLATTCQDCGHRKLPVDRIVGGQDTSLGRWPWQVSLRYDGAHLCGGSLLSKDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGLQMGVQAVIYHGDYLPFRDPNSEENSNDIALVHLSSSLVLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL", "length": 403, "header": "tr|A0A287AX79-1|A0A287AX79_PIG Computationally mapped isoform of Serine protease hepsin OS=Sus scrofa OX=9823 GN=HPN PE=4 SV=1 CANONICAL=I3L6R5-1" }, "locus": { "chromosome": "6", "start_pos": 44627734, "end_pos": 44609456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047523.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047523.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048757.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048757.2" } ] } }, { "isoform_ac": "A0A5G2QCY8-1", "url": "https://www.uniprot.org/uniprotkb/I3L6R5/entry#A0A5G2QCY8-1", "sequence": { "sequence": "MAEKEVQVGPGDSRLTVFDETEGTWRLLCSSRSNARVAGLSCEEMGFLRRNRVLSRWRVFAGAVAQTSPHGLQMGVQAVIYHGDYLPFRDPNSEENSNDIALVHLSSSLVLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL", "length": 259, "header": "tr|A0A5G2QCY8-1|I3L6R5_PIG Computationally mapped isoform of Serine protease hepsin OS=Sus scrofa OX=9823 GN=HPN PE=4 SV=1 CANONICAL=I3L6R5-1" }, "locus": { "chromosome": "6", "start_pos": 44627734, "end_pos": 44609456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082725.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082725.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059905.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059905.1" } ] } }, { "isoform_ac": "A0A5G2R148-1", "url": "https://www.uniprot.org/uniprotkb/I3L6R5/entry#A0A5G2R148-1", "sequence": { "sequence": "MAEKEGFPSAHENVSFLRASISSVLFGDLSLEPRRVPGGQPVSCCSGPKVAALTVGTVLLLTGIGAASWAIVTVLLRSDQEPLYPVQVGPGDSRLTVFDETEGTWRLLCSSRSNARVAGLSCEEMGFLRSLTHSELDVRTAGANGTSGFFCVDEGRLPQARRLLEVLSVCDCPRGHFLATTCQDCGHRKLPVDRIVGGQDTSLGRWPWQVSLRYDGAHLCGGSLLSKDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGLQMGVQAVIYHGDYLPFRDPNSEENSNDIALVHLSSSLVLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL", "length": 449, "header": "tr|A0A5G2R148-1|A0A5G2R148_PIG Computationally mapped isoform of Serine protease hepsin OS=Sus scrofa OX=9823 GN=HPN PE=4 SV=1 CANONICAL=I3L6R5-1" }, "locus": { "chromosome": "6", "start_pos": 44627734, "end_pos": 44609456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086034.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086034.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070838.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070838.1" } ] } }, { "isoform_ac": "I3L6R5-1", "url": "https://www.uniprot.org/uniprotkb/I3L6R5/entry#I3L6R5-1", "sequence": { "sequence": "MAEKEGGQPVSCCSGPKVAALTVGTVLLLTGIGAASWAIVTVLLRSDQEPLYPVQVGPGDSRLTVFDETEGTWRLLCSSRSNARVAGLSCEEMGFLRSLTHSELDVRTAGANGTSGFFCVDEGRLPQARRLLEVLSVCDCPRGHFLATTCQDCGHRKLPVDRIVGGQDTSLGRWPWQVSLRYDGAHLCGGSLLSKDWVLTAAHCFPERNRVLSRWRVFAGAVAQTSPHGLQMGVQAVIYHGDYLPFRDPNSEENSNDIALVHLSSSLVLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL", "length": 417, "header": "tr|I3L6R5-1|I3L6R5_PIG Isoform 1 of Serine protease hepsin OS=Sus scrofa OX=9823 GN=HPN PE=4 SV=2 CANONICAL=I3L6R5-1" }, "locus": { "chromosome": "6", "start_pos": 44627734, "end_pos": 44609456, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029557.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029557.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019717.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019717.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QCY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCY8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6806942", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6806942", "resource": "Reactome", "description": "MET Receptor Activation" }, { "id": "R-SSC-8852405", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8852405", "resource": "Reactome", "description": "Signaling by MST1" } ], "orthologs": [ { "uniprot_canonical_ac": "A8DZG9-1", "protein_name": "3.4.21.106", "gene_name": "hpn", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNMSEKKVGRPGMSIFSPCRVVAAVSLILIILGGLGAAIWALVTYLRTTEDTGLFDVQVSAADQRLRVFDSTQWRWKYVCSSSVNQLIANITCEEMGFVRAVNFSVTCAPESGGDRDFFCVKESELTYGKKIKTALYPCKCDKGQILEVICQDCGRRMLPEERIVGGVDARQGSWPWQVSLQYDGVHQCGGSIISDRWIISAAHCFPERYRHASRWRVLMGSIYNTPIRKNVVIAEVKTVVYHSSYLPFVDANIDDNSRDIAVISLTKPLQFTDYIQPVCLPTYGQRLADGQMGTVTGWGNVEYYGTQANVLQEAHVPIISDAVCNGPDYYDNQVTTTMFCAGYEKGGTDSCQGDSGGPFVAADVLSKTSRYRLLGVVSWGTGCAMAKKPGVYTRVSRFLPWISTAMRMYENSPGVHKMARAATP", "length": 425 }, "evidence": [ { "id": "I3L6R5", "url": "https://omabrowser.org/oma/group/I3L6R5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O35453-1", "protein_name": "Serine protease hepsin", "gene_name": "Hpn", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKEDEEPGAHRGGSTCSRPQPGKGGRTAACCSRPKVAALIVGTLLFLTGIGAASWAIVTILLQSDQEPLYQVQLSPGDSRLAVFDKTEGTWRLLCSSRSNARVAGLGCEEMGFLRALAHSELDVRTAGANGTSGFFCVDEGGLPLAQRLLDVISVCDCPRGRFLTATCQDCGRRKLPVDRIVGGQDSSLGRWPWQVSLRYDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVARTSPHAVQLGVQAVIYHGGYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALVDGKVCTVTGWGNTQFYGQQAMVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISGTSRWRLCGIVSWGTGCALARKPGVYTKVTDFREWIFKAIKTHSEASGMVTQP", "length": 436 }, "evidence": [ { "id": "I3L6R5", "url": "https://omabrowser.org/oma/group/I3L6R5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P05981-1", "protein_name": "Serine protease hepsin", "gene_name": "HPN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQKEGGRTVPCCSRPKVAALTAGTLLLLTAIGAASWAIVAVLLRSDQEPLYPVQVSSADARLMVFDKTEGTWRLLCSSRSNARVAGLSCEEMGFLRALTHSELDVRTAGANGTSGFFCVDEGRLPHTQRLLEVISVCDCPRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIKTHSEASGMVTQL", "length": 417 }, "evidence": [ { "id": "I3L6R5", "url": "https://omabrowser.org/oma/group/I3L6R5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q05511-1", "protein_name": "Serine protease hepsin", "gene_name": "Hpn", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKEGGRTAPCCSRPKVAALTVGTLLFLTGIGAASWAIVTILLRSDQEPLYQVQLSPGDSRLLVLDKTEGTWRLLCSSRSNARVAGLGCEEMGFLRALAHSELDVRTAGANGTSGFFCVDEGGLPLAQRLLDVISVCDCPRGRFLTATCQDCGRRKLPVDRIVGGQDSSLGRWPWQVSLRYDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVARTSPHAVQLGVQAVIYHGGYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQALVDGKVCTVTGWGNTQFYGQQAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGYPEGGIDACQGDSGGHFVCEDRISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAIKTHSEATGMVTQP", "length": 416 }, "evidence": [ { "id": "I3L6R5", "url": "https://omabrowser.org/oma/group/I3L6R5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "serine-type exopeptidase activity", "id": "GO:0070008", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070008", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "serine-type peptidase activity", "id": "GO:0008236", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008236", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 12, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "positive regulation of gene expression", "id": "GO:0010628", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010628", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "protein processing", "id": "GO:0016485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016485", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "positive regulation of hepatocyte proliferation", "id": "GO:2000347", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000347", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "positive regulation of plasminogen activation", "id": "GO:0010756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010756", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "positive regulation of cell growth", "id": "GO:0030307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030307", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "negative regulation of apoptotic process", "id": "GO:0043066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043066", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "negative regulation of epithelial cell proliferation", "id": "GO:0050680", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050680", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "regulation of cell shape", "id": "GO:0008360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008360", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "host-mediated activation of viral transcription", "id": "GO:0043923", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043923", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "negative regulation of epithelial to mesenchymal transition", "id": "GO:0010719", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010719", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "basement membrane disassembly", "id": "GO:0034769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034769", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "nuclear membrane", "id": "GO:0031965", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031965", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3L6R5", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 112, "end_pos": 114, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-6800198", "name": "HPN heterodimer cleaves pro-MST1 to form MST1 dimer", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6800198", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6800198" } ] }, { "id": "R-SSC-6800200", "name": "HPN heterodimer cleaves pro-HGF to form HGF dimer", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, plasma membrane", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6800200", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6800200" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L6R5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6R5" }, { "id": "PS50240", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50240" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase S1", "eco_id": "ECO_0000259", "start_pos": 163, "end_pos": 405, "start_aa": "Ile", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 112, "end_pos": 114 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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{ "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SUT1-1", "uniprot_ac": "F1SUT1", "uniprot_id": "F1SUT1_PIG", "mass": { "chemical_mass": 25408.0, "monoisotopic_mass": 25408.0 }, "refseq": { "ac": "XP_005667152", "name": "pleckstrin homology domain-containing family B member 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667152" }, "gene_names": [ { "name": "PLEKHB1", "type": "recommended", "evidence": [ { "id": "F1SUT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUT1" } ] }, { "name": "PLEKHB1", "type": "synonym", "evidence": [ { "id": "XP_005667152", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667152" } ] } ], "protein_names": [ { "name": "Pleckstrin homology domain containing B1", "type": "synonym", "evidence": [ { "id": "F1SUT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUT1/entry#names_and_taxonomy" } ] }, { "name": "pleckstrin homology domain-containing family B member 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005667152", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667152" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SUT1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLEKHB1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1", "locus": { "chromosome": "9", "start_pos": 8117815, "end_pos": 8102056, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014827", "url": "https://www.ensembl.org/id/ENSSSCG00000014827" } ] } } ], "crossref": [ { "id": "ENSSSCG00000014827", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014827", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13265", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13265", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513608", "url": "https://www.ncbi.nlm.nih.gov/gene/100513608", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HFNVRDV", "url": "https://omabrowser.org/oma/group/HFNVRDV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SUT1", "url": "https://www.orthodb.org/?gene=F1SUT1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14309", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14309", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14309:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14309:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005667152", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667152", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AS74", "url": "https://www.uniprot.org/uniprotkb/A0A287AS74", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AS74-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AS74-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD24", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD24", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD24-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD24-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ13", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ13", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ13-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ13-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9Z9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9Z9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F9Z9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F9Z9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUT1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUT1-1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGQECHDVQPPEGRSRDGLLTVNLREGTRLHLCAETRDDALAWKTALLEANSTPAPAGATVPPRSRRVCPKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVVVREDPYYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 224, "header": "tr|F1SUT1-1|F1SUT1_PIG Isoform 1 of Pleckstrin homology domain containing B1 OS=Sus scrofa OX=9823 GN=PLEKHB1 PE=1 SV=3 CANONICAL=F1SUT1-1" }, "isoforms": [ { "isoform_ac": "A0A287AS74-1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1/entry#A0A287AS74-1", "sequence": { "sequence": "MCLEQRLGRRQAGWPLFVYSHSFKRFLGGSPREERGGTSLWRAAEARCVLWLLRQVPPDSALESPFEEMALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGQECHDVQPPEGRSRDGLLTVNLREGTRLHLCAETRDDALAWKTALLEANSTPAPAGATVPPRSRRVCPKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVVVREDPYYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 292, "header": "tr|A0A287AS74-1|A0A287AS74_PIG Computationally mapped isoform of Pleckstrin homology domain containing B1 OS=Sus scrofa OX=9823 GN=PLEKHB1 PE=1 SV=2 CANONICAL=F1SUT1-1" }, "locus": { "chromosome": "9", "start_pos": 8116666, "end_pos": 8104683, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045022.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045022.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046770.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046770.2" } ] } }, { "isoform_ac": "A0A5G2QD24-1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1/entry#A0A5G2QD24-1", "sequence": { "sequence": "MRLWVRSLALLSGFRIQRSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGQECHDVQPPEGRSRDGLLTVNLREGTRLHLCAETRDDALAWKTALLEANSTPAPAGATVPPRSRRVCPKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVVVREDPYYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 229, "header": "tr|A0A5G2QD24-1|F1SUT1_PIG Computationally mapped isoform of Pleckstrin homology domain containing B1 OS=Sus scrofa OX=9823 GN=PLEKHB1 PE=1 SV=1 CANONICAL=F1SUT1-1" }, "locus": { "chromosome": "9", "start_pos": 8116666, "end_pos": 8106204, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074117.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074117.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059945.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059945.1" } ] } }, { "isoform_ac": "A0A5G2QQ13-1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1/entry#A0A5G2QQ13-1", "sequence": { "sequence": "YLPPVPPDSALESPFEEMALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGQECHDVQPPEGRSRDGLLTVNLREGTRLHLCAETRDDALAWKTALLEANSTPAPAGATVPPRSRRVCPKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVVVREDPYYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 241, "header": "tr|A0A5G2QQ13-1|F1SUT1_PIG Computationally mapped isoform of Pleckstrin homology domain containing B1 OS=Sus scrofa OX=9823 GN=PLEKHB1 PE=1 SV=2 CANONICAL=F1SUT1-1" }, "locus": { "chromosome": "9", "start_pos": 8116666, "end_pos": 8104061, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082056.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082056.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066985.2", "url": "https://www.ensembl.org/id/ENSSSCP00000066985.2" } ] } }, { "isoform_ac": "A0A8W4F9Z9-1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1/entry#A0A8W4F9Z9-1", "sequence": { "sequence": "MSPAAPVPPDSALESPFEEMALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGQECHDVQPPEGRSRDGLLTVNLREGTRLHLCAETRDDALAWKTALLEANSTPAPAGATVPPRSRRVCPKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVVVREDPYYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 243, "header": "tr|A0A8W4F9Z9-1|A0A8W4F9Z9_PIG Computationally mapped isoform of Pleckstrin homology domain containing B1 OS=Sus scrofa OX=9823 GN=PLEKHB1 PE=1 SV=1 CANONICAL=F1SUT1-1" }, "locus": { "chromosome": "9", "start_pos": 8116666, "end_pos": 8102326, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098977.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098977.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075122.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075122.1" } ] } }, { "isoform_ac": "F1SUT1-1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1/entry#F1SUT1-1", "sequence": { "sequence": "MALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGQECHDVQPPEGRSRDGLLTVNLREGTRLHLCAETRDDALAWKTALLEANSTPAPAGATVPPRSRRVCPKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVVVREDPYYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 224, "header": "tr|F1SUT1-1|F1SUT1_PIG Isoform 1 of Pleckstrin homology domain containing B1 OS=Sus scrofa OX=9823 GN=PLEKHB1 PE=1 SV=3 CANONICAL=F1SUT1-1" }, "locus": { "chromosome": "9", "start_pos": 8116666, "end_pos": 8104887, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016179.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016179.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015746.3", "url": "https://www.ensembl.org/id/ENSSSCP00000015746.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD24", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD24" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7FN91-1", "protein_name": "Pleckstrin homology domain-containing family B member 1 isoform X1", "gene_name": "Plekhb1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKVGQECHDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPAPAGATVPPRSRRVCPKVRCTTLSWKPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVIVREDPCYSAGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 224 }, "evidence": [ { "id": "F1SUT1", "url": "https://omabrowser.org/oma/group/F1SUT1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0ABZ3NNR8-1", "protein_name": "Pleckstrin homology domain containing B1", "gene_name": "PLEKHB1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCYPRTEGQIGDPPVSLGSGLERKDDFLWELCAPFCHPRRFPLGSAFLIPLSPRLLGICPPAGAFWKCCSDGPGTMSPAAPVPPDSTLESPFEEMALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGQECHDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALLEANSTPAPAGATVPPRSRRVCPKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHETTYVRSYYGPPYVGPGVTHVVVREDPCYSAGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 319 }, "evidence": [ { "id": "F1SUT1", "url": "https://omabrowser.org/oma/group/F1SUT1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9QYE9-1", "protein_name": "Pleckstrin homology domain-containing family B member 1", "gene_name": "Plekhb1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSPATPVPPDSILESPFEEMALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPAPAGATVPPRSRRVCPKVRCTTLSWNPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVIVREDPCYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 243 }, "evidence": [ { "id": "F1SUT1", "url": "https://omabrowser.org/oma/group/F1SUT1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UF11-1", "protein_name": "Pleckstrin homology domain-containing family B member 1", "gene_name": "PLEKHB1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSPAAPVPPDSALESPFEEMALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHFNVRDIKIGPECHDVQPPEGRSRDGLLTVNLREGGRLHLCAETKDDALAWKTALLEANSTPAPAGATVPPRSRRVCSKVRCVTRSWSPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYAGPGVTHVIVREDPCYSAGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 243 }, "evidence": [ { "id": "F1SUT1", "url": "https://omabrowser.org/oma/group/F1SUT1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9WU68-1", "protein_name": "Pleckstrin homology domain-containing family B member 1", "gene_name": "Plekhb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANSTPAPAGATVPPRSRRVCPKVRCTSLSWKPCKVERRIWVRVYSPYQDYYEVVPPNAHEATYVRSYYGPPYGPGVTHVIVREDPCYSSGAPLAMGMLAGAATGAALGSLMWSPCWF", "length": 223 }, "evidence": [ { "id": "F1SUT1", "url": "https://omabrowser.org/oma/group/F1SUT1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SUT1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of cell differentiation", "id": "GO:0045595", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045595", "evidence": [ { "database": "UniProtKB", "id": "F1SUT1", "url": "https://www.uniprot.org/uniprotkb/F1SUT1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 108, "end_pos": 110, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SUT1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUT1" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 2, "end_pos": 109, "start_aa": "Ala", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 108, "end_pos": 110 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L9Q5-1", "uniprot_ac": "I3L9Q5", "uniprot_id": "I3L9Q5_PIG", "mass": { "chemical_mass": 89935.0, "monoisotopic_mass": 89935.0 }, "refseq": { "ac": "XP_020918150", "name": "X-ray radiation resistance-associated protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918150" }, "gene_names": [ { "name": "XRRA1", "type": "recommended", "evidence": [ { "id": "I3L9Q5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5" } ] }, { "name": "XRRA1", "type": "synonym", "evidence": [ { "id": "XP_020918150", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918150" } ] } ], "protein_names": [ { "name": "X-ray radiation resistance-associated protein 1", "type": "recommended", "evidence": [ { "id": "I3L9Q5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5/entry#names_and_taxonomy" } ] }, { "name": "X-ray radiation resistance-associated protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020918150", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918150" } ] } ], "function": [ { "annotation": "May be involved in the response of cells to X-ray radiation.", "evidence": [ { "database": "UniProtKB", "id": "I3L9Q5", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5#function" }, { "database": "UniProtKB", "id": "ARBA00056245", "url": "https://www.uniprot.org/uniprotkb/ARBA00056245#function" }, { "database": "UniProtKB", "id": "A0A5G2QFA6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFA6#function" }, { "database": "UniProtKB", "id": "A0A5G2QGM0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGM0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L9Q5", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "XRRA1", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5", "locus": { "chromosome": "9", "start_pos": 9155210, "end_pos": 9280639, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021702", "url": "https://www.ensembl.org/id/ENSSSCG00000021702" } ] } } ], "crossref": [ { "id": "I3L9Q5", "url": "https://alphafold.ebi.ac.uk/entry/I3L9Q5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021702", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021702", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518139", "url": "https://www.ncbi.nlm.nih.gov/gene/100518139", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518139", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518139", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FCQEPTS", "url": "https://omabrowser.org/oma/group/FCQEPTS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L9Q5", "url": "https://www.orthodb.org/?gene=I3L9Q5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22710", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22710", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22710:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22710:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_020918150", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918150", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QFA6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFA6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFA6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFA6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGM0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGM0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGM0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGM0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZU0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QZU0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QZU0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9Q5", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9Q5-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASSGVYKLDDGKPYLSNCFPAKSLLRMPEEAGRGHWLVARKCGPKKKPKAVVAAPAEGQESRKVSFEVGGKKGSWQENQVDVPGHVLDQAFLLKHHCVKNPSDLCSINVSGLKFSQAKDKDFKHFNSVIYINASENLLPLEAFHTFPALKELELAFNCIKTVYVKYGDFKSLEFLDLSFNSLTVEAICDLGILPHLRVLLLTGNGLTSLPPNLAVTEQEASVTSLTSKRYILRFPALETLMLDDNKLSHPSCFASLAGLRRLKKLSLDQNRIFRIPYLQQVQLRDGSGDWVGGRRSPRKGPQSRLQPKLWMFEASDDQPDYTVLPMKKDVDRTEVVFSSYPGFSTSETTKVCALPPVFEILPVNSLKARNQTLAPPFPELRCLSLAYNKIAKEDAVLPVALFPSLCELIFHNNPLVAHTRGVPPLLKSFLQERLGIHLIRRKIVKAKHHILMPRRDSRKVKTQVPKVPKQPLLLHHPPVTTIQSSSKEGLESEAELMKELPTSNSGSVKREMPIEGLEGLSLSHRTFVPLPPICSDSTVQSEETAHQSDAPGRLSPDRLSDEDIKSTESVFLTQVSGLSSCIFQRDDSETKEKGRSPPPTAPGEARKTRKKLQSASLPRKYHGYEELLTARPDPDFIEPKGIQKNTQALKRMFKHPLPYRPGRPRLDAPQKRYVPKEKRTQRIPVPPPRKTRAQLLDDILIRMRDPRHLTEAPLGAVLQQRTEQRLVNQKQYLEAKRLLKEFRARYRRLVRTSLRTVLGATAPPQARPALSEAQPKFSRFLELMDEFYQEPTASDSKG", "length": 799, "header": "tr|I3L9Q5-1|I3L9Q5_PIG Isoform 1 of X-ray radiation resistance-associated protein 1 OS=Sus scrofa OX=9823 GN=XRRA1 PE=4 SV=2 CANONICAL=I3L9Q5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QFA6-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5/entry#A0A5G2QFA6-1", "sequence": { "sequence": "MASSGVYKLDDGKPYLSNCFPAKSLLRMPEEGRGHWLVARKCGPKKKPKAVVAAPAEGQESRKVSFEVGGKKGSWQENQVDVPGHVLDQAFLLKHHCVKNPSDLCSINVSGLKFSQAKDKDFKHFNSVIYINASENLLPLEAFHTFPALKELELAFNCIKTVYVKYGDFKSLEFLDLSFNSLTVEAICDLGILPHLRVLLLTGNGLTSLPPNLAVTEQEASVTSLTSKRYILRFPALETLMLDDNKLSHPSCFASLAGLRRLKKLSLDQNRIFRIPYLQQVQLRDGSGDWVGGRRSPRKGPQSRLQPKLWMFEASDDQPDYTVLPMKKDVDRTEVVFSSYPGFSTSETTKVCALPPVFEILPVNSLKARNQTLAPPFPELRCLSLAYNKIAKEDAVLPVALFPSLCELIFHNNPLVAHTRGVPPLLKSFLQERLGIHLIRRKIVKAKHHILMPRRDSRKVKTQVPKVPKQPLLLHHPPVTTIQSSSKEGLESEAELMKELPTSNSGSVKREMPIEGLEGLSLSHRTFVPLPPICSDSTVQSEETAHQSDAPGRLSPDRLSDEDIKSTESVFLTQVSGLSSCIFQRDDSETKEKGRSPPPTAPGEARKTRKKLQSASLPRKYHGYEELLTARPDPDFIEPKGIQKNTQALKRMFKHPLPYRPGRPRLDAPQKRYVPKEKRTQRIPVPPPRKTRAQLLDDILIRMRDPRHLTEAPLGAVLQQRTEQRLVNQKQYLEAKRLLKEFRARYRRLVRTSLRTVLGATAPPQARPALSEAQPKFSRFLELMDEFYQEPTASDSKG", "length": 798, "header": "tr|A0A5G2QFA6-1|I3L9Q5_PIG Computationally mapped isoform of X-ray radiation resistance-associated protein 1 OS=Sus scrofa OX=9823 GN=XRRA1 PE=4 SV=2 CANONICAL=I3L9Q5-1" }, "locus": { "chromosome": "9", "start_pos": 9274808, "end_pos": 9179209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075384.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075384.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063407.2", "url": "https://www.ensembl.org/id/ENSSSCP00000063407.2" } ] } }, { "isoform_ac": "A0A5G2QGM0-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5/entry#A0A5G2QGM0-1", "sequence": { "sequence": "MASSGVYKLDDGKPYLSNCFPAKSLLRMPEEGRGHWLVARKCGPKKKPKAVVAAPAEGQESRKVSFEVGGKKGSWQENQVDVPGHVLDQAFLLKHHCVKNPSDLCSINAKDKDFKHFNSVIYINASENLLPLEAFHTFPALKELELAFNCIKTVYVKYGDFKSLEFLDLSFNSLTVEAICDLGILPHLRVLLLTGNGLTSLPPNLAVTEQEASVTSLTSKRYILRFPALETLMLDDNKLSHPSCFASLAGLRRLKKLSLDQNRIFRIPYLQQVQLRDGSGDWVGGRRSPRKGPQSRLQPKLWMFEASDDQPDYTVLPMKKDVDRTGVPPLLKSFLQERLGIHLIRRKIVKAKHHILMPRRDSRKVKTQVPKVPKQPLLLHHPPVTTIQSSSKEGLESEAELMKELPTSNSGSVKREMPIEGLEGLSLSHRTFVPLPPICSDSTVQSEETAHQSDAPGRLSPDRLSDEDIKSTESVFLTQVSGLSSCIFQRDDSETKEKGRSPPPTAPGEARKTRKKLQSASLPRKYHGYEELLTARPDPDFIEPKGIQKNTQALKRMFKHPLPYRPGRPRLDAPQKRYVPKEKRELFCSNGQSSGW", "length": 596, "header": "tr|A0A5G2QGM0-1|I3L9Q5_PIG Computationally mapped isoform of X-ray radiation resistance-associated protein 1 OS=Sus scrofa OX=9823 GN=XRRA1 PE=4 SV=1 CANONICAL=I3L9Q5-1" }, "locus": { "chromosome": "9", "start_pos": 9274808, "end_pos": 9179424, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076726.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076726.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062958.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062958.1" } ] } }, { "isoform_ac": "A0A5G2QZU0-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5/entry#A0A5G2QZU0-1", "sequence": { "sequence": "MLDDNKLSHPSCFASLAGLRRLKKLSLDQNRIFRIPYLQQVQLRDGSGDWVGGRRSPRKGPQSRLQPKLWMFEASDDQPDYTVLPMKKDVDRTEVVFSSYPGFSTSEIAKEDAVLPVALFPSLCELIFHNNPLVAHTRGVPPLLKSFLQERLGIHLIRRKIVKAKHHILMPRRDSRKVKTQVPKVPKQPLLLHHPPVTTIQSSSKEGLESEAELMKELPTSNSGSVKREMPIEGLEGLSLSHRTFVPLPPICSDSTVQSEETAHQSDAPGRLSPDRLSDEDIKSTESVFLTQVSGLSSCIFQRDDSETKEKGRSPPPTAPGEARKTRKKLQSASLPRKYHGYEELLTARPDPDFIEPKGIQKNTQALKRMFKHPLPYRPGRPRLDAPQKRYVPKEKRTQRIPVPPPRKTRAQLLDDILIRMRDPRHLTEAPLGAVLQQRTEQRLVNQKQYLEAKRLLKEFRARYRRLVRTSLRTVLGATAPPQARPALSEAQPKFSRFLELMDEFYQEPTASDSKG", "length": 516, "header": "tr|A0A5G2QZU0-1|I3L9Q5_PIG Computationally mapped isoform of X-ray radiation resistance-associated protein 1 OS=Sus scrofa OX=9823 GN=XRRA1 PE=4 SV=1 CANONICAL=I3L9Q5-1" }, "locus": { "chromosome": "9", "start_pos": 9240970, "end_pos": 9179209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083872.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083872.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070413.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070413.1" } ] } }, { "isoform_ac": "I3L9Q5-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5/entry#I3L9Q5-1", "sequence": { "sequence": "MASSGVYKLDDGKPYLSNCFPAKSLLRMPEEAGRGHWLVARKCGPKKKPKAVVAAPAEGQESRKVSFEVGGKKGSWQENQVDVPGHVLDQAFLLKHHCVKNPSDLCSINVSGLKFSQAKDKDFKHFNSVIYINASENLLPLEAFHTFPALKELELAFNCIKTVYVKYGDFKSLEFLDLSFNSLTVEAICDLGILPHLRVLLLTGNGLTSLPPNLAVTEQEASVTSLTSKRYILRFPALETLMLDDNKLSHPSCFASLAGLRRLKKLSLDQNRIFRIPYLQQVQLRDGSGDWVGGRRSPRKGPQSRLQPKLWMFEASDDQPDYTVLPMKKDVDRTEVVFSSYPGFSTSETTKVCALPPVFEILPVNSLKARNQTLAPPFPELRCLSLAYNKIAKEDAVLPVALFPSLCELIFHNNPLVAHTRGVPPLLKSFLQERLGIHLIRRKIVKAKHHILMPRRDSRKVKTQVPKVPKQPLLLHHPPVTTIQSSSKEGLESEAELMKELPTSNSGSVKREMPIEGLEGLSLSHRTFVPLPPICSDSTVQSEETAHQSDAPGRLSPDRLSDEDIKSTESVFLTQVSGLSSCIFQRDDSETKEKGRSPPPTAPGEARKTRKKLQSASLPRKYHGYEELLTARPDPDFIEPKGIQKNTQALKRMFKHPLPYRPGRPRLDAPQKRYVPKEKRTQRIPVPPPRKTRAQLLDDILIRMRDPRHLTEAPLGAVLQQRTEQRLVNQKQYLEAKRLLKEFRARYRRLVRTSLRTVLGATAPPQARPALSEAQPKFSRFLELMDEFYQEPTASDSKG", "length": 799, "header": "tr|I3L9Q5-1|I3L9Q5_PIG Isoform 1 of X-ray radiation resistance-associated protein 1 OS=Sus scrofa OX=9823 GN=XRRA1 PE=4 SV=2 CANONICAL=I3L9Q5-1" }, "locus": { "chromosome": "9", "start_pos": 9274808, "end_pos": 9179209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030717.2", "url": "https://www.ensembl.org/id/ENSSSCT00000030717.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020768.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020768.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 601, "start_aa": "Thr", "end_pos": 601, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr601", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFA6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFA6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518139", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518139", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K0N1-1", "protein_name": "X-ray radiation resistance-associated protein 1", "gene_name": "Xrra1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLSGPKCCVLRREVKRQVKKQKQKEGKESLPKSKIREMVSSGIYKMDNGKPCLNNCFPAKSLLRLPEEGRGHWLVARKGSMKKGVAKASTEGQENQKKVSFDTGLKKISRRDSQAEIGGHILDRSFLLKHHSARKPSELCTINVSGMKFSKAKEKDFKHFTSVIYINASENLLPLDVFHTFPTLKELELAFNGIKMVYVKYGDFKTLEFLDLSFNSLTEEAICDLGILPHLRVLLLTGNGLTSLPPNMAVKEQEASVTSLTSKKYILRFPALETLMLDDNKLSNPSCFASLAGLRRLKKLSLDQNKIFRIPYLQQVQLRDGTGDWVTEGPNSQKELQPQMWIFETPDEQPNYTVLPMKKDVDRTEVVFSSYPGFSTSETTKVCSLPPIFEILPVKSLKARNQTLAPPFPELRYLSLAYNKIAKEDAVLPAALFPSLCELIFHNNPLVAHTRGIPPLLKSFLQDRLGIRLVRKKLVKPKHHMLMPRKESRKVKTYIPKVSKHSLVPHHLSTITDNRPSSLLPEPELSTENTSHEALFTNEGPEGPPVTHRAFVPMPPICSDSTVHSDIVSHQSRTAGLMSPEHPSDDDAKSTESIFLTQVNELPSSTVHRDNLEAEESHQRRPSTAPRETKRTRRKQTATSLHNKYDGYEELLTVKPDPAFVEPKGIQKNAQALHRMLKQPLICRSSKPRLDTFQKPYIPKEKRVARIPIPPPRKTRAQLLDDILIRMRDPRNVTEAPLGAVLQRRGQQRLVNQKQYREAKRLLKEFRARYRQLVRSSLRTVFTSSPPPRPPTRRALSAGQPKLGRFLEFMDEFCQEPTAGDSKE", "length": 825 }, "evidence": [ { "id": "I3L9Q5", "url": "https://omabrowser.org/oma/group/I3L9Q5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3U3V8-1", "protein_name": "X-ray radiation resistance-associated protein 1", "gene_name": "Xrra1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSSGMYKMDNGKPCLNNCFPAKSLLRLPEEGRGHWIVVRKGSMKKGAAKASTEGQESQKKVSFDTGLKKISRRDSQADVLGHILDRSFLLKHHSARKPSDLCTINVSGMKFSKAKEKDFKHFTSVIYINASENLLPLDVFHTFPVLKELELAFNGIKMVYVKYGDFKTLEFLDLSFNSLTEEAICDLGILPHLRVLLLTGNGLTSLPPNMAVKEQEASMTSLTSKKYILRFPALETLMLDDNKLSNPSCFASLAGLRRLKKLSLDQNKIVRIPYLQQIQLRDGSGDWVTEGPNPQKELQPQMWIFETPDEQPNYTVLPMKKDVDRTEVVFSSYPGFSTSETAKVCSLPPMFEILPVKSLKARNQTLAPPFPELRYLSLAYNKIAKEDAVLPAALFPSLCELVFHNNPLVAHTRGIPPLLKSFLQDRLGIRLVRKKLVKPKHHMLMPRKESRKVKTYIPKVPKHSLVPHHLNMITDSPPSSLMPEPEHSTEDTSHEALFANEGPEGPSLTHRAFVPMPPICSDSTVHSEAVSHQSHTAGLVSSEHPSDDDAKSTESIFLTQVNELPSSTAHRENLEAVNDQRRPSTAPRETKRTRRKQTATSLHNKYDGYEELLTVKPDPAFLEPKGIQKNAQALHRMLKQPLICRSSKPRLDTFQKPYVPKEKRAGRIPILPPRKTRAQLLDDILIRMRDPRNVTEAPLGTVLQRRAQQRLVNQKQYREAKRLLKEFRARYRQLVRSSLRTVFAASPPPRPPTRRALSAGQPKLGRFLEFMDEFCQEPTASDSKE", "length": 786 }, "evidence": [ { "id": "I3L9Q5", "url": "https://omabrowser.org/oma/group/I3L9Q5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P2D8-1", "protein_name": "X-ray radiation resistance-associated protein 1", "gene_name": "XRRA1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAFSGIYKLDDGKPYLNNCFPARNLLRVPEEGQGHWLVVQKGNLKKKPKGLVGAQAERRESLKATSFEFKGKKESRRENQVDLPGHILDQAFLLKHHCVRKPSDLCTINAKENDFKHFHSVIYINASENLLPLEAFHTFPALKELDLAFNGIKTIYVKYGDFKLLEFLDLSFNSLTVEAICDLGILPHLRVLLLTGNGLTSLPPNLAVAEQEASVTSLTSKRYILRFPALETLMLDDNRLSNPSCFASLAGLRRLKKLSLDENRIIRIPYLQQVQLYDESVDWNGGRGSPHKEPQFMLQSKPRMLEDSDEQLDYTVLPMKKDVDRTEVVFSSYPGFSTSETTKICSLPPIFEILPVKSLKARNQTLAPPFPELRYLSLAYNKIAKEDAVLPVALFPSLCEFVFHNNPLVAHTRGVPPLLKSFLQERLGIHLIRRKIVKPKHHVLMSRKESWKVKSEIPKVPKQPLVLHHPRMTTTKSPSKDMLEPEAELAEDLPTTKSTSVESEMPTENLEGHSPSCRTFVPLPPICSNSTVHSEETLSHLSDTTVRLSPERPSDEDSKSTESIFLTQVSELPSSVIHKDDLELKEKDQKKPPTAPREVKGTRRKLPTAFLPSKYHGYEELLTAKPDPAFIEPKGIQKNAQALQQMLKHPLLCHSSKPKLDTLQKPYVHKEKRAQRIPIPPPKKTRAQLLDDIFIRLRDPRNITEAPLGAVLHQWTERRLVNHKQYLEAKRLLKEFQARYRQLVSGSLRTVFGTTPLPMACPALSESQPKFGHFLEFMDEFCQEPTASDSQG", "length": 792 }, "evidence": [ { "id": "I3L9Q5", "url": "https://omabrowser.org/oma/group/I3L9Q5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L9Q5", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3L9Q5", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "I3L9Q5", "url": "https://www.uniprot.org/uniprotkb/I3L9Q5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 109, "end_pos": 111, "annotation": "n_glycosylation_sequon" }, { "start_pos": 133, "end_pos": 135, "annotation": "n_glycosylation_sequon" }, { "start_pos": 371, "end_pos": 373, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L9Q5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 799, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L9Q5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L9Q5" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 601 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 109, "end_pos": 111 }, { "start_pos": 133, "end_pos": 135 }, { "start_pos": 371, "end_pos": 373 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SV46-1", "uniprot_ac": "F1SV46", "uniprot_id": "F1SV46_PIG", "mass": { "chemical_mass": 97208.0, "monoisotopic_mass": 97208.0 }, "refseq": {}, "gene_names": [ { "name": "MAP7D1", "type": "recommended", "evidence": [ { "id": "F1SV46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV46" } ] } ], "protein_names": [ { "name": "MAP7 domain containing 1", "type": "synonym", "evidence": [ { "id": "F1SV46", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SV46", "url": "https://www.uniprot.org/uniprotkb/F1SV46" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MAP7D1", "url": "https://www.uniprot.org/uniprotkb/F1SV46", "locus": { "chromosome": "6", "start_pos": 92325584, "end_pos": 92297987, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003637", "url": "https://www.ensembl.org/id/ENSSSCG00000003637" } ] } } ], "crossref": [ { "id": "F1SV46", "url": "https://alphafold.ebi.ac.uk/entry/F1SV46", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003637", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003637", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR008604", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008604", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051483", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051483", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15073", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15073", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15073:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15073:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05672", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05672", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A286ZJM7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJM7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJM7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJM7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFD5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFD5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFD5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R161", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R161", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R161-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R161-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5C6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5C6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5C6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5C6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJB8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FJB8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FJB8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV46", "url": "https://www.uniprot.org/uniprotkb/F1SV46", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV46-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L992", "url": "https://www.uniprot.org/uniprotkb/I3L992", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L992-1", "url": "https://www.uniprot.org/uniprotkb/I3L992-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESGSRSEPGAGAPPAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQGRGGSPGRAPARGGAGASLANGPRPDRTHPSAAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKRLEEIMKRTRKSEAAETKKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVVQPPQVTGRAPCLLDPRPYLPAALPGLLSPVLSSPSSARGPLTLGLGHGFP", "length": 887, "header": "tr|F1SV46-1|F1SV46_PIG Isoform 1 of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=5 CANONICAL=F1SV46-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJM7-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#A0A286ZJM7-1", "sequence": { "sequence": "MESGSRSEPGAGAPPAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKRLEEIMKRTRKSEAAETKKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVVQPPQVTGRAPCLLDPRPYLPAALPGLLSPVLSSPSSARGPLTLGLGHGFP", "length": 855, "header": "tr|A0A286ZJM7-1|A0A286ZJM7_PIG Computationally mapped isoform of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=2 CANONICAL=F1SV46-1" }, "locus": { "chromosome": "6", "start_pos": 92322070, "end_pos": 92299178, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041983.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041983.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031764.2", "url": "https://www.ensembl.org/id/ENSSSCP00000031764.2" } ] } }, { "isoform_ac": "A0A5G2QFD5-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#A0A5G2QFD5-1", "sequence": { "sequence": "MELLPGARNEVPTHHRSQQLAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKPLEPDCSSSLKQKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVVQPPQVTGRAPCLLDPRPYLPAALPGLLSPVLSSPSSARGPLTLGLGHGFP", "length": 854, "header": "tr|A0A5G2QFD5-1|F1SV46_PIG Computationally mapped isoform of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=2 CANONICAL=F1SV46-1" }, "locus": { "chromosome": "6", "start_pos": 92322070, "end_pos": 92308855, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073554.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073554.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060753.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060753.2" } ] } }, { "isoform_ac": "A0A5G2R161-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#A0A5G2R161-1", "sequence": { "sequence": "MESGSRSEPGAGAPPAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRKTNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKRLEEIMKRTRKSEAAETKKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVVQPPQVTGRAPCLLDPRPYLPAALPGLLSPVLSSPSSARGPLTLGLGHGFP", "length": 818, "header": "tr|A0A5G2R161-1|F1SV46_PIG Computationally mapped isoform of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=1 CANONICAL=F1SV46-1" }, "locus": { "chromosome": "6", "start_pos": 92322070, "end_pos": 92299178, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072180.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072180.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064247.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064247.1" } ] } }, { "isoform_ac": "A0A5G2R5C6-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#A0A5G2R5C6-1", "sequence": { "sequence": "MCSAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKPLEPDCSSSLKQKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVVQPPQVTGRAPCLLDPRPYLPAALPGLLSPVLSSPSSARGPLTLGLGHGFP", "length": 837, "header": "tr|A0A5G2R5C6-1|A0A5G2R5C6_PIG Computationally mapped isoform of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=2 CANONICAL=F1SV46-1" }, "locus": { "chromosome": "6", "start_pos": 92322070, "end_pos": 92311569, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087307.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087307.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072434.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072434.2" } ] } }, { "isoform_ac": "A0A8W4FJB8-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#A0A8W4FJB8-1", "sequence": { "sequence": "MELLPGARNEVPTHHRSQQLAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKRLEEIMKRTRKSEAAETKKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVVQPPQVTGRAPCLLDPRPYLPAALPGLLSPVLSSPSSARGPLTLGLGHGFP", "length": 860, "header": "tr|A0A8W4FJB8-1|A0A8W4FJB8_PIG Computationally mapped isoform of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=1 CANONICAL=F1SV46-1" }, "locus": { "chromosome": "6", "start_pos": 92322070, "end_pos": 92308855, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000101242.1", "url": "https://www.ensembl.org/id/ENSSSCT00000101242.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079560.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079560.1" } ] } }, { "isoform_ac": "F1SV46-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#F1SV46-1", "sequence": { "sequence": "MESGSRSEPGAGAPPAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQGRGGSPGRAPARGGAGASLANGPRPDRTHPSAAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKRLEEIMKRTRKSEAAETKKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVVQPPQVTGRAPCLLDPRPYLPAALPGLLSPVLSSPSSARGPLTLGLGHGFP", "length": 887, "header": "tr|F1SV46-1|F1SV46_PIG Isoform 1 of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=5 CANONICAL=F1SV46-1" }, "locus": { "chromosome": "6", "start_pos": 92322070, "end_pos": 92299178, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004033.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004033.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003942.5", "url": "https://www.ensembl.org/id/ENSSSCP00000003942.5" } ] } }, { "isoform_ac": "I3L992-1", "url": "https://www.uniprot.org/uniprotkb/F1SV46/entry#I3L992-1", "sequence": { "sequence": "MESGSRSEPGAGAPPAVAARTPPEPRPSPEGDPSPPPPPPPMSALVPDTPPDTPPAMKNVASPKQLPLEPESPPGLVGPKPASQQEEPPLSEVKSRGPTPPATGPRDARPPRRSSQPSPTAVPASDSTPTKQDVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGRGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQAVPVCPRSASASPLTPLCSAPRSGHRCVPAGERGERRKASAGGSPAPGRLRPETSLVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRLRPRLSAGNADVSPKSKARPSSPSTSWHRPASPCLSPGPGHALPPKPPSPRGTTASPKGRVRRKDEAKESPSVVGPEDKNQNKGKASDEKEPAAPASPAPSPVPSPTPAQPQKEQPTAEIPADTAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRLREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQREEQERQERKKRLEEIMKRTRKSEAAETKKQDRKEAKTNNSSPVIDPVKAMEARPSGLQKEAVQKEELVPQEPQWSLPNKESPGSLVNGLQPLPAHQENGFSPKGPSGDKSLGRTPEALLPFPEAEAFLKKAVKSFKGLPWIQAQL", "length": 814, "header": "tr|I3L992-1|I3L992_PIG Computationally mapped isoform of MAP7 domain containing 1 OS=Sus scrofa OX=9823 GN=MAP7D1 PE=1 SV=3 CANONICAL=F1SV46-1" }, "locus": { "chromosome": "6", "start_pos": 92322139, "end_pos": 92299178, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026759.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026759.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020604.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020604.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 558, "start_aa": "Thr", "end_pos": 558, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr558", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 589, "start_aa": "Thr", "end_pos": 589, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr589", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 99, "start_aa": "Thr", "end_pos": 99, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr99", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFD5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFD5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "microtubule cytoskeleton", "id": "GO:0015630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015630", "evidence": [ { "database": "UniProtKB", "id": "F1SV46", "url": "https://www.uniprot.org/uniprotkb/F1SV46" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "F1SV46", "url": "https://www.uniprot.org/uniprotkb/F1SV46" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "F1SV46", "url": "https://www.uniprot.org/uniprotkb/F1SV46" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" }, { "start_pos": 742, "end_pos": 744, "annotation": "n_glycosylation_sequon" }, { "start_pos": 743, "end_pos": 745, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SV46-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 887, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SV46-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SV46" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 99, 558, 589 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 286, "end_pos": 288 }, { "start_pos": 742, "end_pos": 744 }, { "start_pos": 743, "end_pos": 745 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": 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"phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L7S0-1", "uniprot_ac": "I3L7S0", "uniprot_id": "I3L7S0_PIG", "mass": { "chemical_mass": 90043.0, "monoisotopic_mass": 90043.0 }, "refseq": { "ac": "XP_020921319", "name": "progesterone-induced-blocking factor 1 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921319" }, "gene_names": [ { "name": "PIBF1", "type": "recommended", "evidence": [ { "id": "I3L7S0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7S0" } ] }, { "name": "PIBF1", "type": "synonym", "evidence": [ { "id": "XP_020921319", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921319" } ] } ], "protein_names": [ { "name": "Progesterone immunomodulatory binding factor 1", "type": "synonym", "evidence": [ { "id": "I3L7S0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#names_and_taxonomy" } ] }, { "name": "progesterone-induced-blocking factor 1 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020921319", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921319" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L7S0", "url": "https://www.uniprot.org/uniprotkb/I3L7S0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PIBF1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0", "locus": { "chromosome": "11", "start_pos": 45362887, "end_pos": 45076062, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024722", "url": "https://www.ensembl.org/id/ENSSSCG00000024722" } ] } } ], "crossref": [ { "id": "I3L7S0", "url": "https://alphafold.ebi.ac.uk/entry/I3L7S0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024722", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024722", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622391", "url": "https://www.ncbi.nlm.nih.gov/gene/100622391", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026205", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026205", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622391", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622391", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KCERDTF", "url": "https://omabrowser.org/oma/group/KCERDTF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QT03", "url": "https://www.orthodb.org/?gene=A0A5G2QT03", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR18950", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18950", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR18950:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18950:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_020921319", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020921319", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZLY6", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLY6-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLY6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMN1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMN1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMN1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZL5", "url": "https://www.uniprot.org/uniprotkb/A0A287AZL5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AZL5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AZL5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFN3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QT03", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QT03", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QT03-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QT03-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGQ0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGQ0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7S0", "url": "https://www.uniprot.org/uniprotkb/I3L7S0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7S0-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGS5", "url": "https://www.uniprot.org/uniprotkb/I3LGS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGS5-1", "url": "https://www.uniprot.org/uniprotkb/I3LGS5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREELAAMKQILTNMRSKRKENKLLFTKMESKNVTENQKSKTSNVPREHEDNIFIPKPTVFTKKEAPEWSKTQKMKT", "length": 757, "header": "tr|I3L7S0-1|I3L7S0_PIG Isoform 1 of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=4 CANONICAL=I3L7S0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLY6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#A0A286ZLY6-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREELAAMKQILTNMRSKRKENKLLFTKMESKNVTENQKSKTSNVPREHEDNIFIPKPTVFTKKEAPDGLKNPTAVAQVTGGAGLIPNPAKWVKDLVA", "length": 778, "header": "tr|A0A286ZLY6-1|A0A286ZLY6_PIG Computationally mapped isoform of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=2 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45362812, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051035.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051035.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032571.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032571.2" } ] } }, { "isoform_ac": "A0A287AMN1-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#A0A287AMN1-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREELAAMKQILTNMRSKRKENKLLFTKMESKNVTENQKSKTSNVPREHEDNIFIPKPTVFKNRSSYHGAVG", "length": 752, "header": "tr|A0A287AMN1-1|A0A287AMN1_PIG Computationally mapped isoform of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=2 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45362726, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046867.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046867.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045143.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045143.2" } ] } }, { "isoform_ac": "A0A287AZL5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#A0A287AZL5-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTEMGSFLNL", "length": 231, "header": "tr|A0A287AZL5-1|A0A287AZL5_PIG Computationally mapped isoform of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=3 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45095289, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045708.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045708.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049338.3", "url": "https://www.ensembl.org/id/ENSSSCP00000049338.3" } ] } }, { "isoform_ac": "A0A5G2QFN3-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#A0A5G2QFN3-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREHTEVPGPGIGPAPRQ", "length": 698, "header": "tr|A0A5G2QFN3-1|I3L7S0_PIG Computationally mapped isoform of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=1 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45303036, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075303.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075303.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060844.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060844.1" } ] } }, { "isoform_ac": "A0A5G2QT03-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#A0A5G2QT03-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREELAAMKQILTNMRSKRKENKLLFTKMESKNVTENQKSKTSNVPREHEDNIFIPKPTVFVQFPVRSSWLGIQCCRSCGVGCRCSWDSTLGPRTSMCHGYS", "length": 782, "header": "tr|A0A5G2QT03-1|A0A5G2QT03_PIG Computationally mapped isoform of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=1 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45319380, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076691.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076691.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067962.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067962.1" } ] } }, { "isoform_ac": "A0A5G2RGQ0-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#A0A5G2RGQ0-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREELAAMKQILTNMRSKRKENKLLFTKMESKNVTENLL", "length": 719, "header": "tr|A0A5G2RGQ0-1|A0A5G2RGQ0_PIG Computationally mapped isoform of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=2 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45312550, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072847.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072847.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070419.2", "url": "https://www.ensembl.org/id/ENSSSCP00000070419.2" } ] } }, { "isoform_ac": "I3L7S0-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#I3L7S0-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREELAAMKQILTNMRSKRKENKLLFTKMESKNVTENQKSKTSNVPREHEDNIFIPKPTVFTKKEAPEWSKTQKMKT", "length": 757, "header": "tr|I3L7S0-1|I3L7S0_PIG Isoform 1 of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=4 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45332370, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026633.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026633.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020077.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020077.4" } ] } }, { "isoform_ac": "I3LGS5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7S0/entry#I3LGS5-1", "sequence": { "sequence": "MSRKVAKSSKKLNISSSLESEDISLETTVPTDDISSSEERDGKIKITRQLIERKELLHNIQLLKIELSQKNMMIDNLKVDYLTKIEELEEKLNDALHQKQLLTLRLDSQLNFQQKDARKYQELMKQEMETILLRQKQLEETNLQLREKAGDIRRNLRDFELTEEQYMKLKSFPEDQLSIPEYVSIRFYDLVNPLRKEISELRLKKNELLEELSENKGQLKQLTETYEEDRRNYSELQIRCQRLALELADTKQLIQQGDYRKENYDKVKSERDALEQEAVELRRKHEILEASHISQAKERSELSKEVTTLQQTVTLLQKDKEYLNRQNMELSVRCAHEEDRLERLQAQLEETKKAREEMYEKYVTSRDHYKTEYENKLRDELEQIRLKTNQEIDQLRSASREMYERENRSLREARDNALAEKDRAVMAEKDALEKHDQLLDRYRELQLSTESKVTEFLHQSKLKSFESERAQLIQEETARNLTQCQLECEKYQKKLEVLTKEFYGLQSSSEKRITELQAQNSEHQARLDIYEKLEKELDEIIMQTAEIENEDEAERILFSYGYGANVPTTAKRRLKQSVHLARRVLQLEKQNSLVLRDLEHQKNQVTQLSQELDRANSLLNQTQQPYRYLIESVRQRDSKIDSLKECITQLEKDVSNLNKEKSALQQMKNQMALDLEQLLNHREEFLKSCWAKIIGF", "length": 696, "header": "tr|I3LGS5-1|I3LGS5_PIG Computationally mapped isoform of Progesterone immunomodulatory binding factor 1 OS=Sus scrofa OX=9823 GN=PIBF1 PE=4 SV=3 CANONICAL=I3L7S0-1" }, "locus": { "chromosome": "11", "start_pos": 45286113, "end_pos": 45077556, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025113.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025113.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023269.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023269.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QFN3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFN3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622391", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622391", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MK89-1", "protein_name": "Progesterone immunomodulatory binding factor 1", "gene_name": "PIBF1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"categories": [ "Protein Classification" ] }, { "id": "PF00106", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00106", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231089", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231089", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QGL0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QGL0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSI2", "url": "https://www.uniprot.org/uniprotkb/F1SSI2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSI2-1", "url": "https://www.uniprot.org/uniprotkb/F1SSI2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSWELFLWLLALCVLLALVVQLLRFLRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFLSMAYLWQYIPTWAWWLTSKIGKKRIENFKSGVDADSSYFKIWKKKHD", "length": 339, "header": "tr|F1SSI2-1|F1SSI2_PIG Isoform 1 of Dehydrogenase/reductase 7 OS=Sus scrofa OX=9823 GN=DHRS7 PE=1 SV=1 CANONICAL=F1SSI2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QGL0-1", "url": "https://www.uniprot.org/uniprotkb/F1SSI2/entry#A0A5G2QGL0-1", "sequence": { "sequence": "MSWELFLWLLALCVLLALVVQLLRFLRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFLSMAYLWQYIPTWAWWLTSKIGKKRIENLWVWP", "length": 324, "header": "tr|A0A5G2QGL0-1|F1SSI2_PIG Computationally mapped isoform of Dehydrogenase/reductase 7 OS=Sus scrofa OX=9823 GN=DHRS7 PE=1 SV=2 CANONICAL=F1SSI2-1" }, "locus": { "chromosome": "1", "start_pos": 189170407, "end_pos": 189151964, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077244.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077244.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061136.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061136.2" } ] } }, { "isoform_ac": "F1SSI2-1", "url": "https://www.uniprot.org/uniprotkb/F1SSI2/entry#F1SSI2-1", "sequence": { "sequence": "MSWELFLWLLALCVLLALVVQLLRFLRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFLSMAYLWQYIPTWAWWLTSKIGKKRIENFKSGVDADSSYFKIWKKKHD", "length": 339, "header": "tr|F1SSI2-1|F1SSI2_PIG Isoform 1 of Dehydrogenase/reductase 7 OS=Sus scrofa OX=9823 GN=DHRS7 PE=1 SV=1 CANONICAL=F1SSI2-1" }, "locus": { "chromosome": "1", "start_pos": 189170407, "end_pos": 189153766, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005603.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005603.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005463.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005463.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGL0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGL0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152785", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152785", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A0T8-1", "protein_name": "Dehydrogenase/reductase 7", "gene_name": "Dhrs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWELLLWLLALCAVILPLVQFLRFLRADADLTLLWAEWQGRRPEWELTDMVVWITGASSGIGEELAFQLSKLGVCLVLSARRGQELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRSLVLETNLEVFKELMNLNYLGTVSLTKCVLPHMVERKQGKIVTVNSLAGIASVSLSSGYCASKHALRGFFNALHSELGKYPGITLCNVYPGPVQSNVVKNALTEELTKPMRENIDQSYKMPTSRCVRLMLISMANDLKEVWISDQPILLGAYIWQYMPTWALWLTCKLGEKRIQNFRNNLDPDSQYTLWKPKRD", "length": 338 }, "evidence": [ { "id": "F1SSI2", "url": "https://omabrowser.org/oma/group/F1SSI2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3IAP8-1", "protein_name": "Dehydrogenase/reductase SDR family member 7", "gene_name": "LOC100752553", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSWELLLWLLALCALILPLVQFLRFLRADADLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELALQLSKLGVSLVLSARRVQELERVKRRCLETGNLKEKDILVLPLDLTDTDSHEAATKAVLQEFGKIDILVNNGGRSQRSLVLETNLDVFKELINLNYLGTVSLTKCVLPHMVERKQGKIVTVNSAAGIASVALSSGYCASKHALRGFFNALQCELIQYPGITFCNVYPGPVQSDIVKNALTEEVTKPMRNGIDQSYKMPTSRCVRLMLISMANDLKEVWISDHPVLMGTYMWQYMPTWALWLTSKLGKKRIQNFKNGLDPDTSYNIWKTKRD", "length": 338 }, "evidence": [ { "id": "F1SSI2", "url": "https://omabrowser.org/oma/group/F1SSI2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9CXR1-1", "protein_name": "Dehydrogenase/reductase SDR family member 7", "gene_name": "Dhrs7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSWELLLWLLALCALILPLVQLLRFLRADADLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRSLVLETNLDVFKELINLNYIGTVSLTKCVLPHMIERKQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSELGQYPGITFCNVYPGPVQSDIVKNAFTEEVTKSMRNNIDQSYKMPTSRCVRLMLISMANDLKEVWISDHPVLLGAYIWQYMPTWAAWLNCKLGKERIQNFKNNLDPDLPYKFLKAKKD", "length": 338 }, "evidence": [ { "id": "F1SSI2", "url": "https://omabrowser.org/oma/group/F1SSI2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y394-1", "protein_name": "Dehydrogenase/reductase SDR family member 7", "gene_name": "DHRS7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNWELLLWLLVLCALLLLLVQLLRFLRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAGEVTKTIGNNGDQSHKMTTSRCVRLMLISMANDLKEVWISEQPFLLVTYLWQYMPTWAWWITNKMGKKRIENFKSGVDADSSYFKIFKTKHD", "length": 339 }, "evidence": [ { "id": "F1SSI2", "url": "https://omabrowser.org/oma/group/F1SSI2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "F1SSI2", "url": "https://www.uniprot.org/uniprotkb/F1SSI2" } ], "pmid": "" }, { "name": "all-trans-retinol dehydrogenase (NADP+) activity", "id": "GO:0052650", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0052650", "evidence": [ { "database": "UniProtKB", "id": "F1SSI2", "url": "https://www.uniprot.org/uniprotkb/F1SSI2" } ], "pmid": "" }, { "name": "carbonyl reductase (NADPH) activity", "id": "GO:0004090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004090", "evidence": [ { "database": "UniProtKB", "id": "F1SSI2", "url": "https://www.uniprot.org/uniprotkb/F1SSI2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SSI2", "url": "https://www.uniprot.org/uniprotkb/F1SSI2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 114, "end_pos": 116, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], 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"IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026003", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026003", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056235", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056235", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057412", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057412", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR20938", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20938", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20938:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20938:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12765", "url": 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"Protein" ] }, { "id": "F1STY6", "url": "https://www.uniprot.org/uniprotkb/F1STY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STY6-1", "url": "https://www.uniprot.org/uniprotkb/F1STY6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "LRLTKPSKSAALHIDLCKATSPADALQYLLQFARKPVEAESVEGVVRILLEHYYKENDPSVRLKIASLLGLLSKTAGFSPDCIMDDAINILQNEKSHQVLAQLLDTLLAIGTKLPENQAVQMRLVDVACKHLTDTSHGVRNKCLQLLGNLGSLEKTVAKDAEGLAVRDVQKIIGDYFSDQDPRVRTAAIKAMLQLHERGLKLHQTIYNQACKLLSDDYEQVRSAAVQLIWVVSQLYLKGHIVPIPSSNEEIRLVDDAFGKICHMVSDGSWVVRVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWGDDAPKEEVDTGAVNLIESGACGAFVHGLEDEMYEVRIAAVEALCMLAQSSPSFAEKCLDFLVDMFNDEIEEVRLQSIHTMRKISNNITLREDQLDTVLAVLEDSSRDIREALHELLCCTNVSTKEGIHLALVELLKNLTKYPTDRDSIWKCLKFLGSRHPTLVLPLVPELLSTHPYFDTAEPDMDDPAYIAVLVLIFNAAKTCPTMPALFSDHTFRHYAYLRDSLSHLVPALRLPGRKLVSSALSPNITPHEDPSHQFLQQSLERVYSLQHLDPQGTQELLEFTIRDLQRLGELQSELAGVADFSATYLRCQLLLIKALQEKLWNVAAPLYLKQSDLASAAAKQIMEETYKMEFMYSGVESKQVVIIHHMRLQAKALQLIVIARTTRGVDPLFGMCEKFLQEVDFFQRCFIADLPHLQDSFVDKLLDLMPRLMTSKPAEVVKILHTMLRQCTFLHLPLPEQIHKASATIIEPAGESDNPLRFTSGLVVALDVDATLEHVQDPQSTVKVQVLYPDGQAQIIHPKPADFRNPGPGRHRLITQVYLSHTAWTEPCQVEVRLLLAYNSNSRIPKSPWIEGGEMSPPVETSIEGTIPFSKPVKVYIMPKPARR", "length": 937, "header": "tr|F1STY6-1|F1STY6_PIG Isoform 1 of Integrator complex subunit 4 OS=Sus scrofa OX=9823 GN=INTS4 PE=3 SV=5 CANONICAL=F1STY6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QGW5-1", "url": "https://www.uniprot.org/uniprotkb/F1STY6/entry#A0A5G2QGW5-1", "sequence": { "sequence": "MPALKQLTSFMSHIFRDLQRLGELQSELAGVADFSATYLRCQLLLIKIMEETYKMEFMYSGVESKQVVIIHHMRLQAKALQLIVIARTTRGVDPLFGMCEKFLQEVDFFQRCFIADLPHLQDSFVDKLLDLMPRLMTSKPAEVVKILHTMLRQCTFLHLPLPEQIHKASATIIEPAGESDNPLRFTSGLVVALDVDATLEHVQDPQSTVKVQVLYPDGQAQIIHPKPADFRNPGPGRHRLITQVYLSHTAWTEPCQVEVRLLLAYNSNSRIPKSPWIEGGEMSPPVETSIEGTIPFSKPVKVYIMPKPARR", "length": 311, "header": "tr|A0A5G2QGW5-1|F1STY6_PIG Computationally mapped isoform of Integrator complex subunit 4 OS=Sus scrofa OX=9823 GN=INTS4 PE=3 SV=1 CANONICAL=F1STY6-1" }, "locus": { "chromosome": "9", "start_pos": 12346016, "end_pos": 12313485, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089688.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089688.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064018.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064018.1" } ] } }, { "isoform_ac": "F1STY6-1", "url": "https://www.uniprot.org/uniprotkb/F1STY6/entry#F1STY6-1", "sequence": { "sequence": "LRLTKPSKSAALHIDLCKATSPADALQYLLQFARKPVEAESVEGVVRILLEHYYKENDPSVRLKIASLLGLLSKTAGFSPDCIMDDAINILQNEKSHQVLAQLLDTLLAIGTKLPENQAVQMRLVDVACKHLTDTSHGVRNKCLQLLGNLGSLEKTVAKDAEGLAVRDVQKIIGDYFSDQDPRVRTAAIKAMLQLHERGLKLHQTIYNQACKLLSDDYEQVRSAAVQLIWVVSQLYLKGHIVPIPSSNEEIRLVDDAFGKICHMVSDGSWVVRVQAAKLLGSMEQVSSHFLEQTLDKKLMSDLRRKRTAHERAKELYSSGEFSSGRKWGDDAPKEEVDTGAVNLIESGACGAFVHGLEDEMYEVRIAAVEALCMLAQSSPSFAEKCLDFLVDMFNDEIEEVRLQSIHTMRKISNNITLREDQLDTVLAVLEDSSRDIREALHELLCCTNVSTKEGIHLALVELLKNLTKYPTDRDSIWKCLKFLGSRHPTLVLPLVPELLSTHPYFDTAEPDMDDPAYIAVLVLIFNAAKTCPTMPALFSDHTFRHYAYLRDSLSHLVPALRLPGRKLVSSALSPNITPHEDPSHQFLQQSLERVYSLQHLDPQGTQELLEFTIRDLQRLGELQSELAGVADFSATYLRCQLLLIKALQEKLWNVAAPLYLKQSDLASAAAKQIMEETYKMEFMYSGVESKQVVIIHHMRLQAKALQLIVIARTTRGVDPLFGMCEKFLQEVDFFQRCFIADLPHLQDSFVDKLLDLMPRLMTSKPAEVVKILHTMLRQCTFLHLPLPEQIHKASATIIEPAGESDNPLRFTSGLVVALDVDATLEHVQDPQSTVKVQVLYPDGQAQIIHPKPADFRNPGPGRHRLITQVYLSHTAWTEPCQVEVRLLLAYNSNSRIPKSPWIEGGEMSPPVETSIEGTIPFSKPVKVYIMPKPARR", "length": 937, "header": "tr|F1STY6-1|F1STY6_PIG Isoform 1 of Integrator complex subunit 4 OS=Sus scrofa OX=9823 GN=INTS4 PE=3 SV=5 CANONICAL=F1STY6-1" }, "locus": { "chromosome": "9", "start_pos": 12429389, "end_pos": 12313485, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016238.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016238.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015804.5", "url": "https://www.ensembl.org/id/ENSSSCP00000015804.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QGW5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QGW5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6807505", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "resource": "Reactome", "description": "RNA polymerase II transcribes snRNA genes" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1STY6", "url": "https://www.uniprot.org/uniprotkb/F1STY6" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1STY6", "url": "https://www.uniprot.org/uniprotkb/F1STY6" } ], "pmid": "" }, { "name": "integrator complex", "id": "GO:0032039", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032039", "evidence": [ { "database": "UniProtKB", "id": "F1STY6", "url": "https://www.uniprot.org/uniprotkb/F1STY6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "snRNA processing", "id": "GO:0016180", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016180", "evidence": [ { "database": "UniProtKB", "id": "F1STY6", "url": "https://www.uniprot.org/uniprotkb/F1STY6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 415, "end_pos": 417, "annotation": "n_glycosylation_sequon" }, { "start_pos": 449, "end_pos": 451, "annotation": "n_glycosylation_sequon" }, { "start_pos": 466, "end_pos": 468, "annotation": "n_glycosylation_sequon" }, { "start_pos": 576, "end_pos": 578, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1STY6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 937, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1STY6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1STY6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1STY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STY6" }, { "id": "PF24493", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24493" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "INTS4 8 helical bundle", "eco_id": "ECO_0000259", "start_pos": 586, "end_pos": 788, "start_aa": "Gln", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1STY6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STY6" }, { "id": "PF25458", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25458" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Integrator complex subunit 4/Protein SIEL C-terminal Ig-like", "eco_id": "ECO_0000259", "start_pos": 797, "end_pos": 934, "start_aa": "Thr", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 415, "end_pos": 417 }, { "start_pos": 449, "end_pos": 451 }, { "start_pos": 466, "end_pos": 468 }, { "start_pos": 576, "end_pos": 578 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRD0-1", "uniprot_ac": "F1SRD0", "uniprot_id": "F1SRD0_PIG", "mass": { "chemical_mass": 93469.0, "monoisotopic_mass": 93469.0 }, "refseq": { "ac": "XP_005669509", "name": "CUB domain-containing protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669509" }, "gene_names": [ { "name": "CDCP1", "type": "recommended", "evidence": [ { "id": "F1SRD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRD0" } ] }, { "name": "CDCP1", "type": "synonym", "evidence": [ { "id": "XP_005669509", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669509" } ] } ], "protein_names": [ { "name": "CUB domain containing protein 1", "type": "synonym", "evidence": [ { "id": "F1SRD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRD0/entry#names_and_taxonomy" } ] }, { "name": "CUB domain-containing protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005669509", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669509" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRD0", "url": "https://www.uniprot.org/uniprotkb/F1SRD0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CDCP1", "url": "https://www.uniprot.org/uniprotkb/F1SRD0", "locus": { "chromosome": "13", "start_pos": 28257417, "end_pos": 28319215, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011298", "url": "https://www.ensembl.org/id/ENSSSCG00000011298" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011298", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011298", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512497", "url": "https://www.ncbi.nlm.nih.gov/gene/100512497", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR038811", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038811", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056266", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056266", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056268", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056268", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056269", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056269", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056965", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056965", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512497", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512497", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "IACETGR", "url": "https://omabrowser.org/oma/group/IACETGR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRD0", "url": "https://www.orthodb.org/?gene=F1SRD0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14477", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14477", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14477:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14477:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF23665", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23665", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23667", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23667", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23668", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23668", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25142", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25142", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005669509", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669509", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QHG6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHG6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHG6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYP7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRC9", "url": "https://www.uniprot.org/uniprotkb/F1SRC9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRC9-1", "url": "https://www.uniprot.org/uniprotkb/F1SRC9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRD0", "url": "https://www.uniprot.org/uniprotkb/F1SRD0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRD0-1", "url": "https://www.uniprot.org/uniprotkb/F1SRD0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGLNFGVTVAVLGVLLLSASRLSSGVEVYEIALPHGSGITVFIKPGTPTLPMKLCHIISSRRKETTLSIKSGDKIVFYFSCQDPENHFVIEIQKNIDCMAGPCPFGEVQLQPSTSVLPSLNRTFIWDVRAHKNIGLELQFSHPRLRQIGPRESCPDGVSHSISGRIDTSLVRIGTFCRNGTVSRIKMQEGVKMALHLPWFHDRNISGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPDGFPEDELMTWQFIIPAHLRASVSFLHFNVSNCVKKEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQNPGILRLQFQVLVQRPQDESNKTYVVDLSNEQAMSLTIEPRLSKQSRKFVPGCFVCLDSRTCSTNLTLTSGSKHKISFLCDDLTRLWINAEKTITCMDHRYCHRKSYSLQVPWYILQLPVQLHDFSWKLLVPKDSLSLALVPAQKLQQHTHERACNTSFSYLLASAVPGQELYFGFFCSGGSIEQIQVKQNVSVTLRTFAPNFQQEASRQNLTVSFIPHFKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFLKERTGVVCQTGRAFMIIQEQRARAEEIFSLEEEVLPKPSFHHHSFWVNISNCSPASGKQLDLLFWVSLSPRTTDLTVIIIAVVGGGALLLFALGLIICFVKKNRKKKITKGPAVGIYNGNVNTQMPMQPKKFQKRRKDNDSHVYAVIDDTMVYGHLLQDANGSFLQPEVDTYRPFQGPTGDRPPSPPPICSRAPTAKLTTEEPSPGFLPESESEPYAFSHPKDGNISNGNTDTPLLDAHKPTEPGE", "length": 837, "header": "tr|F1SRD0-1|F1SRD0_PIG Isoform 1 of CUB domain containing protein 1 OS=Sus scrofa OX=9823 GN=CDCP1 PE=4 SV=3 CANONICAL=F1SRD0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QHG6-1", "url": "https://www.uniprot.org/uniprotkb/F1SRD0/entry#A0A5G2QHG6-1", "sequence": { "sequence": "MKLCHIISSRRKETTLSIKSGDKIVFYFSCQDPENHFVIEIQKNIDCMAGPCPFGEVQLQPSTSVLPSLNRTFIWDVRAHKNIGLELQFSHPRLRQIGPRESCPDGVSHSISGRIDTSLVRIGTFCRNGTVSRIKMQEGVKMALHLPWFHDRNISGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPDGFPEDELMTWQFIIPAHLRASVSFLHFNVSNCVKKEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQNPGILRLQFQVLVQRPQDESNKTYVVDLSNEQAMSLTIEPRLSKQSRKFVPGCFVCLDSRTCSTNLTLTSGSKHKISFLCDDLTRLWINAEKTITCMDHRYCHRKSYSLQVPWYILQLPVQLHDFSWKLLVPKDSLSLALVPAQKLQQHTHERACNTSFSYLLASAVPGQELYFGFFCSGGSIEQIQVKQNVSVTLRTFAPNFQQEASRQNLTVSFIPHFKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFLKERTGVVCQTGRAFMIIQEQRARAEEIFSLEEEVLPKPSFHHHSFWVNISNCSPASGKQLDLLFWVSLSPRTTDLTVIIIAVVGGGALLLFALGLIICFVKKNRKKKITKGPAVGIYNGNVNTQMPMQPKKFQKRRKDNDSHVYAVIDDTMVYGHLLQDANGSFLQPEVDTYRPFQGPTGDRPPSPPPICSRAPTAKLTTEEPSPGFLPESESEPYAFSHPKDGNISNGNTDTPLLDAHKPTEPGE", "length": 785, "header": "tr|A0A5G2QHG6-1|F1SRD0_PIG Computationally mapped isoform of CUB domain containing protein 1 OS=Sus scrofa OX=9823 GN=CDCP1 PE=4 SV=1 CANONICAL=F1SRD0-1" }, "locus": { "chromosome": "13", "start_pos": 28292294, "end_pos": 28260387, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067842.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067842.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063794.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063794.1" } ] } }, { "isoform_ac": "A0A5G2QYP7-1", "url": "https://www.uniprot.org/uniprotkb/F1SRD0/entry#A0A5G2QYP7-1", "sequence": { "sequence": "MTNPRPESFLVPFSDSVSDILLHSRWDMEVYEIALPHGSGITVFIKPGTPTLPMKLCHIISSRRKETTLSIKSGDKIVFYFSCQDPENHFVIEIQKNIDCMAGPCPFGEVQLQPSTSVLPSLNRTFIWDVRAHKNIGLELQFSHPRLRQIGPRESCPDGVSHSISGRIDTSLVRIGTFCRNGTVSRIKMQEGVKMALHLPWFHDRNISGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPDGFPEDELMTWQFIIPAHLRASVSFLHFNVSNCVKKEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQNPGILRLQFQVLVQRPQDESNKTYVVDLSNEQAMSLTIEPRLSKQSRKFVPGCFVCLDSRTCSTNLTLTSGSKHKISFLCDDLTRLWINAEKTITCMDHRYCHRKSYSLQVPWYILQLPVQLHDFSWKLLVPKDSLSLALVPAQKLQQHTHERACNTSFSYLLASAVPGQELYFGFFCSGGSIEQIQVKQNVSVTLRTFAPNFQQEASRQNLTVSFIPHFKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFLKERTGVVCQTGRAFMIIQEQRARAEEIFSLEEEVLPKPSFHHHSFWVNISNCSPASGKQLDLLFWVSLSPRTTDLTVIIIAVVGGGALLLFALGLIICFVKKNRKKKITKGPAVGIYNGNVNTQMPMQPKKFQKRRKDNDSHVYAVIDDTMVYGHLLQDANGSFLQPEVDTYRPFQGPTGDRPPSPPPICSRAPTAKLTTEEPSPGFLPESESEPYAFSHPKDGNISNGNTDTPLLDAHKPTEPGE", "length": 838, "header": "tr|A0A5G2QYP7-1|F1SRD0_PIG Computationally mapped isoform of CUB domain containing protein 1 OS=Sus scrofa OX=9823 GN=CDCP1 PE=4 SV=1 CANONICAL=F1SRD0-1" }, "locus": { "chromosome": "13", "start_pos": 28318074, "end_pos": 28260387, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000085364.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085364.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069268.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069268.1" } ] } }, { "isoform_ac": "F1SRC9-1", "url": "https://www.uniprot.org/uniprotkb/F1SRD0/entry#F1SRC9-1", "sequence": { "sequence": "MAGLNFGVTVAVLGVLLLSASRLSSGVEVYEIALPHGSGITVFIKPGTPTLPMKLCHIISSRRKETTLSIKSGDKIVFYFSCQDPENHFVIEIQKNIDCMAGPCPFGEVQLQPSTSVLPSLNRTFIWDVRAHKNIGLELQFSHPRLRQIGPRESCPDGVSHSISGRIDTSLVRIGTFCRNGTVSRIKMQEGVKMALHLPWFHDRNISGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPDGFPEDELMTWQFIIPAHLRASVSFLHFNVSNCVKKEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQNPGILRLQFQVLVQRPQDESNKTYVVDLSNEQAMSLTIEPRLSKQSRKFVPGCFVCLDSRTCSTNLTLTSGSKHKISFLCDDLTRLWINAEKTITCMDHRYCHRKSYSLQVPWYILQLPVQLHDFSWKLLVPKDSLSLALVPAQKLQQHTHERACNTSFSYLLASAVPGQELYFGFFCSGGSIEQIQVKQNVSVTLRTFAPNFQQEASRQNLTVSFIPHFKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFLKERTGVVCQTGRAFMIIQEQRARAEEIFSLEEEVLPKPSFHHHSFWVNISNCSPASGKQLDLLFWVSLSPRTTVGKRRSPRARLWVSTMVTSIPRCRCSQKSFRRDGRTMTPMCMPSSMTPWCMGTCCRMPTGPSSSLRWTPTGPSRAPQGTAHPPHPPYAPGPRLQS", "length": 759, "header": "tr|F1SRC9-1|F1SRC9_PIG Computationally mapped isoform of CUB domain containing protein 1 OS=Sus scrofa OX=9823 GN=CDCP1 PE=4 SV=5 CANONICAL=F1SRD0-1" }, "locus": { "chromosome": "13", "start_pos": 28319094, "end_pos": 28260533, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012369.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012369.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012046.5", "url": "https://www.ensembl.org/id/ENSSSCP00000012046.5" } ] } }, { "isoform_ac": "F1SRD0-1", "url": "https://www.uniprot.org/uniprotkb/F1SRD0/entry#F1SRD0-1", "sequence": { "sequence": "MAGLNFGVTVAVLGVLLLSASRLSSGVEVYEIALPHGSGITVFIKPGTPTLPMKLCHIISSRRKETTLSIKSGDKIVFYFSCQDPENHFVIEIQKNIDCMAGPCPFGEVQLQPSTSVLPSLNRTFIWDVRAHKNIGLELQFSHPRLRQIGPRESCPDGVSHSISGRIDTSLVRIGTFCRNGTVSRIKMQEGVKMALHLPWFHDRNISGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPDGFPEDELMTWQFIIPAHLRASVSFLHFNVSNCVKKEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQNPGILRLQFQVLVQRPQDESNKTYVVDLSNEQAMSLTIEPRLSKQSRKFVPGCFVCLDSRTCSTNLTLTSGSKHKISFLCDDLTRLWINAEKTITCMDHRYCHRKSYSLQVPWYILQLPVQLHDFSWKLLVPKDSLSLALVPAQKLQQHTHERACNTSFSYLLASAVPGQELYFGFFCSGGSIEQIQVKQNVSVTLRTFAPNFQQEASRQNLTVSFIPHFKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFLKERTGVVCQTGRAFMIIQEQRARAEEIFSLEEEVLPKPSFHHHSFWVNISNCSPASGKQLDLLFWVSLSPRTTDLTVIIIAVVGGGALLLFALGLIICFVKKNRKKKITKGPAVGIYNGNVNTQMPMQPKKFQKRRKDNDSHVYAVIDDTMVYGHLLQDANGSFLQPEVDTYRPFQGPTGDRPPSPPPICSRAPTAKLTTEEPSPGFLPESESEPYAFSHPKDGNISNGNTDTPLLDAHKPTEPGE", "length": 837, "header": "tr|F1SRD0-1|F1SRD0_PIG Isoform 1 of CUB domain containing protein 1 OS=Sus scrofa OX=9823 GN=CDCP1 PE=4 SV=3 CANONICAL=F1SRD0-1" }, "locus": { "chromosome": "13", "start_pos": 28319094, "end_pos": 28260387, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012368.6", "url": "https://www.ensembl.org/id/ENSSSCT00000012368.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012045.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012045.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QHG6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHG6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512497", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512497", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A2R8PY98-1", "protein_name": "CUB domain-containing protein 1", "gene_name": "cdcp1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGSSAVPVLIGLILLHIHKISECQTIEVTPDPSTNVIFSKKPGQGLDCTVCKNEDSSQSCDSSLRLTESKTTSVSFNCSQPGDVFTVEINQDIDCSSSACSSIAVHPDATRFLEFSRSFTWDVKVHSSKMFHLDFPAPGMRQIKPSESCPDQHTYSITSYQRTGPISIGSFCRNGTISRIQVWYRGRISLEVPKGTPLNPSDFRVSIGPASTGLVEVDVKLPRAESSVDFFTPNYGTGYYNAYKVKWNFAVEPIVNFTVEFKAYAPPECQKKEVTVDYALGEKTSFTTKPTDIQPNNKQGDFSLTLNNCDAKSTPKVPGLSMHIMVGVFRGGIPYLCTVDLQNEEGLSLEIVNTNPQSYCEMRSNSVVQEKIVVPVGSKVDLYFLDCPAQDLRLTATKTIDFSGVSARSVSRTPLIIPPMKWSLPVALNEFSWLLRVPDQTTLDLTSAQRNLHQSVPDKPCKEKVSLLVSESLGSSIGQFCSPADGAIQKIQIRGNVSITVSPNTVKDLSQETDPFLNITLSPEITENVIYTVSPLISGPAYLASPYWPDAMQPSSSASWIINVPPEYRANLWFTNVSKPTCDSGHAELEISPLDSSAETQEWREDQSFPDSIVQQTSFYLNMSNCEPASGRYALLTKIIVQKESKKILAIILAVVGAVLALLIVALVVVCVIRKKHKPSGNRSSIYIPKGKPVLPGNATFPKSRTDNESHVYASIDETIYNRHLDTNHPADSNNGTWTNGHQVDTYRPFLGPTDSIPTDQDLPDGYSLDRGRDKDVFQPFLTPPNTFNLPRPRSPLISQGSLGFEDRRMVDNELNTFKAAGDINPIRLSTDECKLRPQMDSDSDSYHEPEYEEAM", "length": 856 }, "evidence": [ { "id": "F1SRD0", "url": "https://omabrowser.org/oma/group/F1SRD0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0Z218-1", "protein_name": "CUB domain containing protein 1", "gene_name": "CDCP1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGGRALLAVLAVLIAASAQHLKREASFTISLRAADNITVTIKLKPGVLPACLIRVKSGPRPELKIRPGENVTLSFTCNTPEKYLMMEIQKNIDCVSGPCPFGDVHLYPPGLPRLNRIFIWDVKASTKAGLELKFSAPLRQIQPGEMCPDLVSYNINSCIDKATVNIGTFCRNGSVSRVKLLGGVIMSLHLPWNLTVATSGFNIANRSSIKRLCIIESILKGESSIMLMSPNYPLGFPEDELMTWQFVVPSNMRASVFFHDYSLSNCERKEERVEYYIPGSVSNPEVFKLSDSQPANIAGSFNMSLQGCDQDAQNPGVLRLLFQVIVQHPQIDENVTHLVDLSKERNMTVTIHFEGWPRRTPLVSEPMCLICKDPRTCDRVLTLASGATYKISFLCKDLSHLRITAEKGISCVGLRWCESRIYSLSVPKTITQLPVQLHKFIWKLIAPEEINIEITSPSLKLRQHLPEQNCNTSYSYSIISATPETEMNVGIFCPGGAIEKIQLRNNITISLKTFGKGFLNESNHQDLKMSFVPHIKVQAWSHCLDQSLSESVRWLIPAGRKDSCCRWLRGNSAAMSVIITDTEEMIDECTFTVSPDSKAKTYLQTPNSHYGLPPYVSISWYIIVPSKQVARLGFSTDRMGITCETGRAYVNIKEQMPGAEETVRREDELLPQPRNMHYNFWVNISNCKPVDPMQLSLKFWVTFVEKQIDLAVIVGVLAGFGVLAAIGLTVCCIKKKKKKSQNPMVGVYNTNVNTQMPGKQRLFKKDRKTNESHVYAVIDDAMVYGHLLKESNGSVTPEVDVYQPFDGPMGSLPPSPPPFSFRKDVKHSPNTEEPPLLAETDHDAYTFAHQKSGELEDNGEGNAKNNGDTSMSLLENKERDSLEE", "length": 885 }, "evidence": [ { "id": "F1SRD0", "url": "https://omabrowser.org/oma/group/F1SRD0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZVA1-1", "protein_name": "CUB domain containing protein 1", "gene_name": "Cdcp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARSACGFSVALLGTLLLGTACLLRGTASEIALPRGSDITVHIKLVSPALPVKFCYIVVSRQHVTELTIRPGERKSFTFSCNNPEKHYVLKIEKNIDCMSGPCPFGEVRLQPSKSELPILNRTYIWDVRAHKSIGLELQFATPRLRQIGPGESCADGVTHSISGHIDATEVRIGTFCSNGTVSRIKMQEGVKMALHLPWFHPRNISGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPGGFPEDELMTWQFVVPAHLRASVSFLNFNVSNCERKEERVEYYIPGSTTNPEVFRLEDQQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQRPQNESNITYMVDLSQERTMSLTIEPRPVKHGRRFVPGCFVCLDSRTCSTNVTLTAGSKHKISFLCDDLARLWMNVEKTLSCLDHRYYYGKSFNLQVPKDILQLPVQLHDFSWKLLVPKDRLGLMLVPGQKLQQHTRERPCNTSFGYQVASTTPGQDLYFGSFCPGGSIEKIQVKQNSSVTLRTYAPGFQQEVSKQVLTVSLIPYFKEEGIFTVTPDSKNKVYLRSPNWDRGLPALSSVSWNISVPSNQVACLTFFRERSGLACQSGRAFMIIQEQQTRAEEIFSLEEEVLPKPSFHHHSFWVNISNCSPMNGKQLDLLFWVTLTPRTVDLTVIIGAAGGGALLLFALGLIICLVKKKKKVDKGPAVGIYNGNANTQMPQTQKFQKRRKDNDSHVYAVIEDTMVYGHLLQDSGGSFIQAEVDTYRPFQGPMGDCPPTPPPIFSRTPTAKFTADKLAPSSPPESESEPYTFSHPNKGEVGVRDTGIPLLNIQGPMETEE", "length": 832 }, "evidence": [ { "id": "F1SRD0", "url": "https://omabrowser.org/oma/group/F1SRD0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HP50-1", "protein_name": "CUB domain-containing protein 1", "gene_name": "Cdcp1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARSACGFSVALLGALLLGTAHLPHGTEASEISLPHGSGITVRIRLANPALPVKPCHIVMSRQPITELLVKPGERKSFTFNCINPEKHFVLEIEKNIDCMSGPCPFGEVRLQPSTSELPTLNRTFIWDVRAHKSIGLELQFSTPRLRQIGPGERCADGVTHSISGRIDATEVRIGTFCSNGTVSRIKMQEGVKMALHVPWNIPRNISGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPGGFPEDELMTWQFVVPEHLRASVSFLNFNVSNCERKEERVEYYIPGSTTNPEVFRLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQRPQNESNKTYVVDLSQERTMSLTIEPRPVKHGRRFVPGCFVCLESRTCSTNVTLTAGTKHKISFLCDDLTRLWVNAEKTLSCLDYYYCYKKSFHLQVPKDILQLPVQLHDFSWKLLVPKDRLGLMLVPGQKLQQHTRERACNTSLGYVIASTTPGQDLYFGSFCPGGSIEKIQVKQNSSVTLRTYAPSSQQEVSRQGLTVSFIPYFKEEGIFTVTPDTKNKVYLRTPSWDRGLPALSSVSWNISVPSNQVACLTFFKERSGVVCQSGRAYMIIQEQQTRAEEVFSLEEEVLPKPSFHHHSFWVNISNCSPMNGKQLDLLFWVTLTPRTVDLAVIIGAAGGGALLLFALGLIICFVRKKKKINKGPAVGIYNGNVNTQIPQIQNFQKRRKDNDSHVYAVIDDTMVYGHLLQDSGGSFIQPEVDTYRPFQGPMGDCPPSPPPVFSRTPTAKFTADEPAPNSPPESESEPYTFSHPNKGEVGVRETDIPLLNIQGPVETEE", "length": 833 }, "evidence": [ { "id": "F1SRD0", "url": "https://omabrowser.org/oma/group/F1SRD0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3N093-1", "protein_name": "CUB domain containing protein 1", "gene_name": "CDCP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASLNCGVAVALLGILLLGAARLPRGVAYEIDLPRGSGITVLLKPATQALPVKLCYIMSKRWETTLSIKAGEKKVFSFSCQDPHNYFVIEIQKNIDCVSGQCPFGEVYLQPSTSVLPTLNRTFIWDIKASKNVSLELQFSLSRLRQIGLTENCPDGVTHRISGRVDASTMVRIGTFCGNGTVSRIKMQEGVNLALDLPWFHSRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPAGFPEDELMTWQFVIPAPLRASVSFLQFNVSNCVKKEERVEYYIPGSTTNPEVFKLEDQQPGNMAGNFNLSLQGCDQDAQNPGILRLQFQVSVQHPQNDSNKTYVVDLSKERTMSLSIEPRPNKLKREFVPSCFVCLNSRTCSTNLTLTAGSKHTISFLCDDLTRLWINAEKTISCLDHRYCHRMRYSLQLPPSVFQLPVQLHDFTWKLLVPKDRLSLALVPAQKLQQHTHERVCNTSFSYLVASAVPGQNLYFGSFCSGGSIEQIQVKENISVTLRTFAPNFQHESAKQDLTVSFIPHFKEESVFTVTPDTKNKVYLRTPNWDRGLPSLASVSWNISVPRNQVACLTFLKERTGVVCQTGRAFMIIQEQRAHAEEIFSLEEEVLPKPSFRYHSFWVNISNCSPMSGKQLDLLFWVSLTPRTTDLTVIILTVVGGGALLLFALGFIICFVKKNKKKKITKGPAVGIYNGNVNTQMPMQRKKFQKGRKDNDSHVYAVIDDTMVYGHLLQDASGPFIQAEVDTYRPFQGPTGDFPPSPPPTNSKAPTVKLATDEPPPGSPSESESEPYTFSHPKDGKVSNRSTDTPLLDAHEPTEPGE", "length": 836 }, "evidence": [ { "id": "F1SRD0", "url": "https://omabrowser.org/oma/group/F1SRD0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5U462-1", "protein_name": "CUB domain-containing protein 1", "gene_name": "Cdcp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAHSACGFSVALLGALLLGTARLLRGTEASEIALPQRSGVTVSIKLGNPALPVKICYIVMSRQHITELIIRPGERKSFTFSCSNPEKHFVLKIEKNIDCMSGPCPFGEVHLQPSTSELPILNRTFIWDVRAHKSIGLELQFATPRLRQIGPGESCADGVTHSISGHIDATEVRIGTFCSNGTVSRIKMQEGVKMALHLPWFHRRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPGGFPEDELMTWQFVVPAHLRASVSFLNFNVSNCERKEERVEYYIPGSTTNPEVFRLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQRPQDESNKTYMVDLSRERTMSLTIEPRPVKHGRRFVPGCFVCLESRTCSTNVTLTAGSIHKISFLCDDLTRLWVNVEKTLSCLDHRYCYRQSFKLQVPDYILQLPVQLHDFSWKLLVPKDKLSLMLVPGQKLQQHTQERPCNTSFGYHVTSTTPGQDLYFGSFCSGGSIEKIQVKQNSSVTLRAYAPSFQQEVSKQGLIVSYTPYFKEEGIFTVTPDTKNKVYLRSPNWDRGLPALSSVSWNISVPSNQVACLTVLKERSGLACQSGRAFMIIQEQQSRAEEIFSLEEEVLPKPSFHHHSFWVNISNCSPMNGKQLDLLFWVTLTPRTVDLAVVIGAAGGGALLLFALVLIICFVKKKKKVDKGPAVGIYNGNVNTQMPQTQKFPKGRKDNDSHVYAVIEDTMVYGHLLQDSGGSFIQPEVDTYRPFQGPMGDCPPTPPPLFSRTPTAKFTAEELAPSSPPESESEPYTFSHPNKGEIGVRETDIPLLHTQGPVETEE", "length": 833 }, "evidence": [ { "id": "F1SRD0", "url": "https://omabrowser.org/oma/group/F1SRD0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H5V8-1", "protein_name": "CUB domain-containing protein 1", "gene_name": "CDCP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGLNCGVSIALLGVLLLGAARLPRGAEAFEIALPRESNITVLIKLGTPTLLAKPCYIVISKRHITMLSIKSGERIVFTFSCQSPENHFVIEIQKNIDCMSGPCPFGEVQLQPSTSLLPTLNRTFIWDVKAHKSIGLELQFSIPRLRQIGPGESCPDGVTHSISGRIDATVVRIGTFCSNGTVSRIKMQEGVKMALHLPWFHPRNVSGFSIANRSSIKRLCIIESVFEGEGSATLMSANYPEGFPEDELMTWQFVVPAHLRASVSFLNFNLSNCERKEERVEYYIPGSTTNPEVFKLEDKQPGNMAGNFNLSLQGCDQDAQSPGILRLQFQVLVQHPQNESNKIYVVDLSNERAMSLTIEPRPVKQSRKFVPGCFVCLESRTCSSNLTLTSGSKHKISFLCDDLTRLWMNVEKTISCTDHRYCQRKSYSLQVPSDILHLPVELHDFSWKLLVPKDRLSLVLVPAQKLQQHTHEKPCNTSFSYLVASAIPSQDLYFGSFCPGGSIKQIQVKQNISVTLRTFAPSFQQEASRQGLTVSFIPYFKEEGVFTVTPDTKSKVYLRTPNWDRGLPSLTSVSWNISVPRDQVACLTFFKERSGVVCQTGRAFMIIQEQRTRAEEIFSLDEDVLPKPSFHHHSFWVNISNCSPTSGKQLDLLFSVTLTPRTVDLTVILIAAVGGGVLLLSALGLIICCVKKKKKKTNKGPAVGIYNDNINTEMPRQPKKFQKGRKDNDSHVYAVIEDTMVYGHLLQDSSGSFLQPEVDTYRPFQGTMGVCPPSPPTICSRAPTAKLATEEPPPRSPPESESEPYTFSHPNNGDVSSKDTDIPLLNTQEPMEPAE", "length": 836 }, "evidence": [ { "id": "F1SRD0", "url": "https://omabrowser.org/oma/group/F1SRD0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 122, "end_pos": 124, "annotation": "n_glycosylation_sequon" }, { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" }, { "start_pos": 205, "end_pos": 207, "annotation": "n_glycosylation_sequon" }, { "start_pos": 213, "end_pos": 215, "annotation": "n_glycosylation_sequon" }, { "start_pos": 270, "end_pos": 272, "annotation": "n_glycosylation_sequon" }, { "start_pos": 310, "end_pos": 312, "annotation": "n_glycosylation_sequon" }, { "start_pos": 342, "end_pos": 344, "annotation": "n_glycosylation_sequon" }, { "start_pos": 386, "end_pos": 388, "annotation": "n_glycosylation_sequon" }, { "start_pos": 477, "end_pos": 479, "annotation": "n_glycosylation_sequon" }, { "start_pos": 512, "end_pos": 514, "annotation": "n_glycosylation_sequon" }, { "start_pos": 532, "end_pos": 534, "annotation": "n_glycosylation_sequon" }, { "start_pos": 577, "end_pos": 579, "annotation": "n_glycosylation_sequon" }, { "start_pos": 639, "end_pos": 641, "annotation": "n_glycosylation_sequon" }, { "start_pos": 642, "end_pos": 644, "annotation": "n_glycosylation_sequon" }, { "start_pos": 730, "end_pos": 732, "annotation": "n_glycosylation_sequon" }, { "start_pos": 752, "end_pos": 754, "annotation": "n_glycosylation_sequon" }, { "start_pos": 816, "end_pos": 818, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRD0" }, { "id": "PF23667", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23667" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CDCP1 first CUB", "eco_id": "ECO_0000259", "start_pos": 31, "end_pos": 99, "start_aa": "Glu", "end_aa": "Cys", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SRD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRD0" }, { "id": "PF25142", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25142" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CDCP1 fourth CUB", "eco_id": "ECO_0000259", "start_pos": 345, "end_pos": 432, "start_aa": "Tyr", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SRD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRD0" }, { "id": "PF23668", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23668" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CDCP1 second and fifth CUB", "eco_id": "ECO_0000259", "start_pos": 109, "end_pos": 213, "start_aa": "Val", "end_aa": "Asn", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SRD0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRD0" }, { "id": "PF23665", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23665" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CDCP1 third and sixth CUB", "eco_id": "ECO_0000259", "start_pos": 219, "end_pos": 322, "start_aa": "Arg", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 122, "end_pos": 124 }, { "start_pos": 180, "end_pos": 182 }, { "start_pos": 205, "end_pos": 207 }, { "start_pos": 213, "end_pos": 215 }, { "start_pos": 270, "end_pos": 272 }, { "start_pos": 310, "end_pos": 312 }, { "start_pos": 342, "end_pos": 344 }, { "start_pos": 386, "end_pos": 388 }, { "start_pos": 477, "end_pos": 479 }, { "start_pos": 512, "end_pos": 514 }, { "start_pos": 532, "end_pos": 534 }, { "start_pos": 577, "end_pos": 579 }, { "start_pos": 639, "end_pos": 641 }, { "start_pos": 642, "end_pos": 644 }, { "start_pos": 730, "end_pos": 732 }, { "start_pos": 752, "end_pos": 754 }, { "start_pos": 816, "end_pos": 818 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SUS5-1", "uniprot_ac": "F1SUS5", "uniprot_id": "F1SUS5_PIG", "mass": { "chemical_mass": 77991.0, "monoisotopic_mass": 77991.0 }, "refseq": { "ac": "XP_003127683", "name": "F-box only protein 42", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127683" }, "gene_names": [ { "name": "FBXO42", "type": "recommended", "evidence": [ { "id": "F1SUS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUS5" } ] }, { "name": "FBXO42", "type": "synonym", "evidence": [ { "id": "XP_003127683", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127683" } ] } ], "protein_names": [ { "name": "F-box only protein 42", "type": "synonym", "evidence": [ { "id": "XP_003127683", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127683" } ] }, { "name": "F-box protein 42", "type": "synonym", "evidence": [ { "id": "F1SUS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUS5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SUS5", "url": "https://www.uniprot.org/uniprotkb/F1SUS5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FBXO42", "url": "https://www.uniprot.org/uniprotkb/F1SUS5", "locus": { "chromosome": "6", "start_pos": 75364450, "end_pos": 75446085, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024794", "url": "https://www.ensembl.org/id/ENSSSCG00000024794" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024794", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024794", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22110", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22110", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100521974", "url": "https://www.ncbi.nlm.nih.gov/gene/100521974", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052821", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052821", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521974", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521974", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AWLLHIH", "url": "https://omabrowser.org/oma/group/AWLLHIH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SUS5", "url": "https://www.orthodb.org/?gene=F1SUS5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46432", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46432", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46432:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46432:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12937", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12937", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13415", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13415", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003127683", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127683", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ64", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJ64-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ64-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUS5", "url": "https://www.uniprot.org/uniprotkb/F1SUS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUS5-1", "url": "https://www.uniprot.org/uniprotkb/F1SUS5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASSSDSEDDSFMAVDQEETVLEGTMEQDEEPHPVLEAEETRHNRSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRNMDEAPCVNGRWGTLRPRAQRQTPSSSREGSLSPARGDGSPILNGGSLSPGSAAVGGSSLDSPVQAISPSTPSTTEGYDLKMGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASTSNHMDGVDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPSALRRSLEAIKAMSSKGPPASAALSPPLGSSPGSPGSQNLSSGETVPVPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 717, "header": "tr|F1SUS5-1|F1SUS5_PIG Isoform 1 of F-box protein 42 OS=Sus scrofa OX=9823 GN=FBXO42 PE=4 SV=1 CANONICAL=F1SUS5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJ64-1", "url": "https://www.uniprot.org/uniprotkb/F1SUS5/entry#A0A5G2QJ64-1", "sequence": { "sequence": "MASSSDSEDDSFMAVDQEETVLEGTMEQDEEPHPVLEAEETRHNRSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEHGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELCFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRNMDEAPCVNGRWGTLRPRAQRQTPSSSREGSLSPARGDGSPILNGGSLSPGSAAVGGSSLDSPVQAISPSTPSTTEGYDLKMGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASTSNHMDGVDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPSALRRSLEAIKAMSSKGPPASAALSPPLGSSPGSPGSQNLSSGETVPVPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 687, "header": "tr|A0A5G2QJ64-1|F1SUS5_PIG Computationally mapped isoform of F-box protein 42 OS=Sus scrofa OX=9823 GN=FBXO42 PE=4 SV=1 CANONICAL=F1SUS5-1" }, "locus": { "chromosome": "6", "start_pos": 75414986, "end_pos": 75368940, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084593.1", "url": "https://www.ensembl.org/id/ENSSSCT00000084593.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062065.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062065.1" } ] } }, { "isoform_ac": "F1SUS5-1", "url": "https://www.uniprot.org/uniprotkb/F1SUS5/entry#F1SUS5-1", "sequence": { "sequence": "MASSSDSEDDSFMAVDQEETVLEGTMEQDEEPHPVLEAEETRHNRSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRNMDEAPCVNGRWGTLRPRAQRQTPSSSREGSLSPARGDGSPILNGGSLSPGSAAVGGSSLDSPVQAISPSTPSTTEGYDLKMGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASTSNHMDGVDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPSALRRSLEAIKAMSSKGPPASAALSPPLGSSPGSPGSQNLSSGETVPVPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 717, "header": "tr|F1SUS5-1|F1SUS5_PIG Isoform 1 of F-box protein 42 OS=Sus scrofa OX=9823 GN=FBXO42 PE=4 SV=1 CANONICAL=F1SUS5-1" }, "locus": { "chromosome": "6", "start_pos": 75414986, "end_pos": 75368940, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032385.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032385.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027934.1", "url": "https://www.ensembl.org/id/ENSSSCP00000027934.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 378, "start_aa": "Thr", "end_pos": 378, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr378", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJ64", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJ64" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521974", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521974", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MKA4-1", "protein_name": "F-box only protein 42", "gene_name": "Fbxo42", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASSSDSEDDSFMAVDQEETVLEGTMEQEEESHPVLEVEETRHNRSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIGDKMIVFGGSLGSRQMSNEVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGTLSPGTAAVGGASLDSPVQVVSPSTPSASEGYDLKMGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASNSSHVDGTDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPSALRRSLEAIKAMSSKGPSASATLSPPLGSSPSSPGNQNLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 717 }, "evidence": [ { "id": "F1SUS5", "url": "https://omabrowser.org/oma/group/F1SUS5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4AE47-1", "protein_name": "F-box protein 42", "gene_name": "Fbxo42", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVSWPWTKKKLHWKGQWSKMRTHTQYWRLRKQDIIGPCLSCQKRFWSISCPSSHHIRNTKPQLWSASSGIGLSKVQVFQRGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIGDKMIVFGGSLGSRQMSNEVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTAAVGGASLDSPVQVVSPSTPSASDGYDLKVGLSLVPRRGSLPDQKDLRLSSIDVNWDLKSASTSSRVDSTDSRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPSSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 715 }, "evidence": [ { "id": "F1SUS5", "url": "https://omabrowser.org/oma/group/F1SUS5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BIU5-1", "protein_name": "F-box protein 42", "gene_name": "FBXO42", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MASSSDSEDDSFMAVDQEETVLEGTMEQDEEPRAALEVVEMQHNRSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFIKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSSDVWVLDLEQWAWSKPSISGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPVLNGGSLSPGSAAVSGSSLDSPVQAVSPSTPSTTEGYDLKMGLSLAPRRGSLPDQKDLRLGSIDLNWDLKAASSGNHVDGVGSRTAGGSLRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPPASAALSPPLGSSPGSPGSQNLGSGEAVPVPRPGPAQGDGHALPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVRGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 717 }, "evidence": [ { "id": "F1SUS5", "url": "https://omabrowser.org/oma/group/F1SUS5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6P3S6-1", "protein_name": "F-box only protein 42", "gene_name": "FBXO42", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASSSDSEDDSFMAVDQEETVLEGTMDQDEEPHPVLEAEETRHNRSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIDDKMIVFGGSLGSRQMSNDVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDATILILGGCGGPNALFKDAWLLHMHSGPWAWQPLKVENEEHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISPSTPSAPEGYDLKIGLSLAPRRGSLPDQKDLRLGSIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPGSPGSQSLSSGETVPIPRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFNSSSVVGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 717 }, "evidence": [ { "id": "F1SUS5", "url": "https://omabrowser.org/oma/group/F1SUS5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6PDJ6-1", "protein_name": "F-box only protein 42", "gene_name": "Fbxo42", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSSDSEDDSVMAVDQEETALEGTMEQDEDPHPVLEVEETRHNRSMSELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDANQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMAGHSSCVIGDKMIVFGGSLGSRQMSNEVWVLDLEQWAWSKPNISGPSPHPRGGQSQIVIDDTTLLILGGCGGPNALFKDAWLLHMHPGPWAWQPLKVENEDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCVNGRWGTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGNLSPGTVAVGGASLDSPVQVVSPSTPSASDGYDLKVGLSLAPRRGSLPDQKDLRLSSIDLNWDLKSASSSSHVDSIDNRTVAGSVRHPPEQTNGVHTPPHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPSSPGSQSLSSGETVPNSRPGPAQGDGHSLPPIARRLGHHPPQSLNVGKPLYQSMNCKPMQMYVLDIKDTKEKGRVKWKVFTSSSVVGPPETSLHTVVQGRGELIVFGGLMDKKQNVKYYPKTNALYFVRAKR", "length": 717 }, "evidence": [ { "id": "F1SUS5", "url": "https://omabrowser.org/oma/group/F1SUS5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "SCF ubiquitin ligase complex", "id": "GO:0019005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019005", "evidence": [ { "database": "UniProtKB", "id": "F1SUS5", "url": "https://www.uniprot.org/uniprotkb/F1SUS5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "F1SUS5", "url": "https://www.uniprot.org/uniprotkb/F1SUS5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 130, "end_pos": 132, "annotation": "n_glycosylation_sequon" }, { "start_pos": 274, "end_pos": 276, "annotation": "n_glycosylation_sequon" }, { "start_pos": 44, "end_pos": 46, "annotation": "n_glycosylation_sequon" }, { "start_pos": 520, "end_pos": 522, "annotation": "n_glycosylation_sequon" }, { "start_pos": 592, "end_pos": 594, "annotation": "n_glycosylation_sequon" }, { "start_pos": 666, "end_pos": 668, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SUS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUS5" }, { "id": "PS50181", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50181" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000259", "start_pos": 44, "end_pos": 93, "start_aa": "Asn", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 378 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 130, "end_pos": 132 }, { "start_pos": 274, "end_pos": 276 }, { "start_pos": 44, "end_pos": 46 }, { "start_pos": 520, "end_pos": 522 }, { "start_pos": 592, "end_pos": 594 }, { "start_pos": 666, "end_pos": 668 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F2Z5R2-1", "uniprot_ac": "F2Z5R2", "uniprot_id": "F2Z5R2_PIG", "mass": { "chemical_mass": 20479.0, "monoisotopic_mass": 20479.0 }, "refseq": { "ac": "NP_001274775", "name": "GTP-binding protein Rheb", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274775" }, "gene_names": [ { "name": "RHEB", "type": "recommended", "evidence": [ { "id": "F2Z5R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2" } ] }, { "name": "RHEB", "type": "synonym", "evidence": [ { "id": "NP_001274775", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274775" } ] } ], "protein_names": [ { "name": "GTP-binding protein Rheb", "type": "recommended", "evidence": [ { "id": "F2Z5R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#names_and_taxonomy" } ] }, { "name": "GTP-binding protein Rheb", "type": "synonym", "evidence": [ { "id": "NP_001274775", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274775" } ] }, { "name": "Ras homolog enriched in brain", "type": "synonym", "evidence": [ { "id": "NP_001274775", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001274775" }, { "id": "F2Z5R2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Small GTPase that acts as an allosteric activator of the canonical mTORC1 complex, an evolutionarily conserved central nutrient sensor that stimulates anabolic reactions and macromolecule biosynthesis to promote cellular biomass generation and growth. In response to nutrients, growth factors or amino acids, specifically activates the protein kinase activity of MTOR, the catalytic component of the mTORC1 complex: acts by causing a conformational change that allows the alignment of residues in the active site of MTOR, thereby enhancing the phosphorylation of ribosomal protein S6 kinase (RPS6KB1 and RPS6KB2) and EIF4EBP1 (4E-BP1). RHEB is also required for localization of the TSC-TBC complex to lysosomal membranes. In response to starvation, RHEB is inactivated by the TSC-TBC complex, preventing activation of mTORC1. Has low intrinsic GTPase activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0W8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0W8#function" }, { "database": "UniProtKB", "id": "ARBA00054514", "url": "https://www.uniprot.org/uniprotkb/ARBA00054514#function" }, { "database": "UniProtKB", "id": "A0A5G2RAT2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAT2#function" }, { "database": "UniProtKB", "id": "F2Z5R2", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2#function" }, { "database": "UniProtKB", "id": "A0A287ARU9", "url": "https://www.uniprot.org/uniprotkb/A0A287ARU9#function" }, { "database": "UniProtKB", "id": "A0A287A6X6", "url": "https://www.uniprot.org/uniprotkb/A0A287A6X6#function" }, { "database": "UniProtKB", "id": "A0A8W4FI86", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI86#function" }, { "database": "UniProtKB", "id": "A0A5G2QJA7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJA7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F2Z5R2", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RHEB", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2", "locus": { "chromosome": "18", "start_pos": 5822257, "end_pos": 5779212, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016434", "url": "https://www.ensembl.org/id/ENSSSCG00000016434" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016434", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016434", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04137", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04137", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100516050", "url": "https://www.ncbi.nlm.nih.gov/gene/100516050", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001806", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001806", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100516050", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516050", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SARHNEN", "url": "https://omabrowser.org/oma/group/SARHNEN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { 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"https://www.uniprot.org/uniprotkb/A0A5G2RAT2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RAT2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RAT2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI86", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI86-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI86-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5R2", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5R2-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 184, "header": "tr|F2Z5R2-1|F2Z5R2_PIG Isoform 1 of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=3 CANONICAL=F2Z5R2-1" }, "isoforms": [ { "isoform_ac": "A0A287A6X6-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#A0A287A6X6-1", "sequence": { "sequence": "MPQSKSRKIAILGYRSVAFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 160, "header": "tr|A0A287A6X6-1|A0A287A6X6_PIG Computationally mapped isoform of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=1 CANONICAL=F2Z5R2-1" }, "locus": { "chromosome": "18", "start_pos": 5821836, "end_pos": 5779439, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053926.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053926.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039517.1", "url": "https://www.ensembl.org/id/ENSSSCP00000039517.1" } ] } }, { "isoform_ac": "A0A287ARU9-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#A0A287ARU9-1", "sequence": { "sequence": "ICRYVLTIALFAGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 179, "header": "tr|A0A287ARU9-1|A0A287ARU9_PIG Computationally mapped isoform of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=1 CANONICAL=F2Z5R2-1" }, "locus": { "chromosome": "18", "start_pos": 5821836, "end_pos": 5802785, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050990.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050990.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046792.1", "url": "https://www.ensembl.org/id/ENSSSCP00000046792.1" } ] } }, { "isoform_ac": "A0A5G2QJA7-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#A0A5G2QJA7-1", "sequence": { "sequence": "GTLLRRKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 172, "header": "tr|A0A5G2QJA7-1|F2Z5R2_PIG Computationally mapped isoform of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=2 CANONICAL=F2Z5R2-1" }, "locus": { "chromosome": "18", "start_pos": 5821836, "end_pos": 5801995, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090920.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090920.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064547.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064547.2" } ] } }, { "isoform_ac": "A0A5G2R0W8-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#A0A5G2R0W8-1", "sequence": { "sequence": "LKYCTKAASSGVQGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 180, "header": "tr|A0A5G2R0W8-1|F2Z5R2_PIG Computationally mapped isoform of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=1 CANONICAL=F2Z5R2-1" }, "locus": { "chromosome": "18", "start_pos": 5821836, "end_pos": 5781305, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072507.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072507.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067856.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067856.1" } ] } }, { "isoform_ac": "A0A5G2RAT2-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#A0A5G2RAT2-1", "sequence": { "sequence": "RTFGYRGQVSYERNPRALFGSLLDAASGRSRKAGKEKFLLSRCPIFLREKIRSGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 220, "header": "tr|A0A5G2RAT2-1|A0A5G2RAT2_PIG Computationally mapped isoform of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=1 CANONICAL=F2Z5R2-1" }, "locus": { "chromosome": "18", "start_pos": 5821836, "end_pos": 5779980, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088061.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088061.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074440.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074440.1" } ] } }, { "isoform_ac": "A0A8W4FI86-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#A0A8W4FI86-1", "sequence": { "sequence": "MVPRRIRFCCTTAGTARKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 183, "header": "tr|A0A8W4FI86-1|A0A8W4FI86_PIG Computationally mapped isoform of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=1 CANONICAL=F2Z5R2-1" }, "locus": { "chromosome": "18", "start_pos": 5821836, "end_pos": 5802564, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102229.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102229.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079157.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079157.1" } ] } }, { "isoform_ac": "F2Z5R2-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5R2/entry#F2Z5R2-1", "sequence": { "sequence": "MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 184, "header": "tr|F2Z5R2-1|F2Z5R2_PIG Isoform 1 of GTP-binding protein Rheb OS=Sus scrofa OX=9823 GN=RHEB PE=1 SV=3 CANONICAL=F2Z5R2-1" }, "locus": { "chromosome": "18", "start_pos": 5821836, "end_pos": 5779439, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017895.3", "url": "https://www.ensembl.org/id/ENSSSCT00000017895.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017414.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017414.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJA7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJA7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516050", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516050", "resource": "KEGG Pathway" }, { "id": "R-SSC-1632852", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1632852", "resource": "Reactome", "description": "Macroautophagy" }, { "id": "R-SSC-165159", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-165159", "resource": "Reactome", "description": "MTOR signalling" }, { "id": "R-SSC-166208", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-166208", "resource": "Reactome", "description": "mTORC1-mediated signalling" }, { "id": "R-SSC-380972", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-380972", "resource": "Reactome", "description": "Energy dependent regulation of mTOR by LKB1-AMPK" }, { "id": "R-SSC-5628897", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5628897", "resource": "Reactome", "description": "TP53 Regulates Metabolic Genes" }, { "id": "R-SSC-8943724", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8943724", "resource": "Reactome", "description": "Regulation of PTEN gene transcription" }, { "id": "R-SSC-9639288", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9639288", "resource": "Reactome", "description": "Amino acids regulate mTORC1" } ], "orthologs": [ { "uniprot_canonical_ac": "F2Z4I1-1", "protein_name": "GTP-binding protein Rheb", "gene_name": "RHEB", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKIDGAASQGKSSCSVM", "length": 184 }, "evidence": [ { "id": "F2Z5R2", "url": "https://omabrowser.org/oma/group/F2Z5R2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P25378-1", "protein_name": "GTP-binding protein RHB1", "gene_name": "RHB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MEYATMSSSNSTHNFQRKIALIGARNVGKTTLTVRFVESRFVESYYPTIENEFTRIIPYKSHDCTLEILDTAGQDEVSLLNIKSLTGVRGIILCYSIINRASFDLIPILWDKLVDQLGKDNLPVILVGTKADLGRSTKGVKRCVTKAEGEKLASTIGSQDKRNQAAFIECSAELDYNVEETFMLLLKQMERVEGTLGLDAENNNKCSIM", "length": 209 }, "evidence": [ { "id": "F2Z5R2", "url": "https://omabrowser.org/oma/group/F2Z5R2/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q15382-1", "protein_name": "GTP-binding protein Rheb", "gene_name": "RHEB", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKMDGAASQGKSSCSVM", "length": 184 }, "evidence": [ { "id": "F2Z5R2", "url": "https://omabrowser.org/oma/group/F2Z5R2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q550Q4-1", "protein_name": "GTP-binding 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"XP_013843307", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843307", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QK99", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QK99-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QK99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUH5", "url": "https://www.uniprot.org/uniprotkb/F1SUH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUH5-1", "url": "https://www.uniprot.org/uniprotkb/F1SUH5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAESHCELLPPAPGGLGAGLGGSLCRRCSAGLGTLAQRPGNVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRERDSKTSQVPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLVNIGSSYNYGSEDQSEFLCVVSKELHNSPYGTASEPSEKAKILQERGSRM", "length": 234, "header": "tr|F1SUH5-1|F1SUH5_PIG Isoform 1 of Potassium channel tetramerization domain containing 5 OS=Sus scrofa OX=9823 GN=KCTD5 PE=4 SV=2 CANONICAL=F1SUH5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QK99-1", "url": "https://www.uniprot.org/uniprotkb/F1SUH5/entry#A0A5G2QK99-1", "sequence": { "sequence": "MAESHCELLPPAPGGLGAGLGGSLCRRCSAGLGTLAQRPGNVSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNYLRHGKLVINKDLAEEGAGEARVPRAAVSGGGAHADGLHHVRWLEVRAAGEHRLLLQLRERGPVRVPLRGLQGAAQLPVWHGQRAQREGQDLARTGFEDVRDTVLTAEDRAFYLFPRCRDPPCRGSLAVRRNLLLTISLEIWV", "length": 247, "header": "tr|A0A5G2QK99-1|F1SUH5_PIG Computationally mapped isoform of Potassium channel tetramerization domain containing 5 OS=Sus scrofa OX=9823 GN=KCTD5 PE=4 SV=1 CANONICAL=F1SUH5-1" }, "locus": { "chromosome": "3", "start_pos": 39429559, "end_pos": 39405515, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084269.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084269.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065238.1", "url": 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"id": "PTHR23186:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23186:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15279", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15279", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013841404", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013841404", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QMC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QMC9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQQ4", "url": "https://www.uniprot.org/uniprotkb/F1SQQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQQ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SQQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDDLQSQNLSMDMTDSAPALASNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSGAVHSNLFQGAEDPEAQPQLLDLRIPSQPQEPSLPFEAVLQNLFPSQGALGPPPCQPPPGYAPVPPQPFNAPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPVPQSSESKFSPGCPKAPSSFGLQPFRGGPPAVQKEELKPFELLQPREYFQLSRHTVIKMGSENEALDLSMKSVPWLKAGDVSAPACQEDAALDLSLATHRRSEPPPPPETLCDSSGAVDGPGHAAMETPPGGGVEVPFAPATPHEAAAAAAMERHLGGSDAAEPPRQPSGEVKAENNIELGSESQAAKVIVSVEDTVPTIFCGKIKGLSGVSTKNFSFKREDAMLQGYDISSQAEESAGSAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK", "length": 531, "header": "tr|F1SQQ4-1|F1SQQ4_PIG Isoform 1 of Retinoic acid induced 2 OS=Sus scrofa OX=9823 GN=RAI2 PE=4 SV=1 CANONICAL=F1SQQ4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QMC9-1", "url": "https://www.uniprot.org/uniprotkb/F1SQQ4/entry#A0A5G2QMC9-1", "sequence": { "sequence": "MDDLQSQNLSMDMTDSAPALASNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSGAVHSNLFQGAEDPEAQPQLLDLRIPSQPQEPSLPFEAVLQNLFPSQGALGPPPCQPPPGYAPVPPQPFNAPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPVPQSSESKFSPGCPKAPSSFGLQPFRGGPPAVQKEELKPFELLQPREYFQLSRHTVIKMGSENEALDLSMKSVPWLKAGDVSAPACQEDAALDLSLATHRRSEPPPPPETLCDSSGAVDGPGHAAMETPPGGGVEVPFAPATPHEAAAAAAMERHLGGSDAAEPPRQPSGEVKAENNIELGSESQAAKVIVSVEDTVPTIFCGKIKGLSGVSTKNFSFKREDAMLQGYDISSQAEESAGSAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRKAVGSLCWMTEKPCRSKALPKATQNKRRVGGLGGNRREVPGPGERGLGAGSRREAIAFPGSFSPVVLTSGRRSSPGDIQQCLEMLLVAALGGGGAPGVWWGDQDAAKPRDRTLGSPQSREPSNPTVNGAEAQSPR", "length": 665, "header": "tr|A0A5G2QMC9-1|F1SQQ4_PIG Computationally mapped isoform of Retinoic acid induced 2 OS=Sus scrofa OX=9823 GN=RAI2 PE=4 SV=1 CANONICAL=F1SQQ4-1" }, "locus": { "chromosome": "X", "start_pos": 14248739, "end_pos": 14245964, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076885.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076885.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065773.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065773.1" } ] } }, { "isoform_ac": "F1SQQ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SQQ4/entry#F1SQQ4-1", "sequence": { "sequence": "MDDLQSQNLSMDMTDSAPALASNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSGAVHSNLFQGAEDPEAQPQLLDLRIPSQPQEPSLPFEAVLQNLFPSQGALGPPPCQPPPGYAPVPPQPFNAPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPVPQSSESKFSPGCPKAPSSFGLQPFRGGPPAVQKEELKPFELLQPREYFQLSRHTVIKMGSENEALDLSMKSVPWLKAGDVSAPACQEDAALDLSLATHRRSEPPPPPETLCDSSGAVDGPGHAAMETPPGGGVEVPFAPATPHEAAAAAAMERHLGGSDAAEPPRQPSGEVKAENNIELGSESQAAKVIVSVEDTVPTIFCGKIKGLSGVSTKNFSFKREDAMLQGYDISSQAEESAGSAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK", "length": 531, "header": "tr|F1SQQ4-1|F1SQQ4_PIG Isoform 1 of Retinoic acid induced 2 OS=Sus scrofa OX=9823 GN=RAI2 PE=4 SV=1 CANONICAL=F1SQQ4-1" }, "locus": { "chromosome": "X", "start_pos": 14248739, "end_pos": 14247147, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013294.2", "url": "https://www.ensembl.org/id/ENSSSCT00000013294.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012938.1", "url": "https://www.ensembl.org/id/ENSSSCP00000012938.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QMC9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QMC9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154649", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154649", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AAA9U1J6-1", "protein_name": "Retinoic acid induced 2", "gene_name": "RAI2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDDLQSQNLAMDMSDSSPTLTNNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGVALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNQSGNATYVMTAQGPVQLPVVLEQHVFQHLNSPLVLPPEAPGSSSTIHNNLFQGARDPEAQPQLLDLRIPSQPQEPPLPFEAVLHNLFPAQGALGPPPCQPPPGYTPVPPQPFNSPLSPLVPPATLLVPYPVIVPLPVPLPIPIPIPVPQSSEAKFSPTCPKPPSAFGLHPFKGPQSPLQKEEVKPFDLFQPREYFQLGRHTVIKMGSENEALDLSMKSVPWLKAGEVSPAMDQEDTALDLSLSAHRKPEPPPETLYDSSGSVDSPGHPVLEKLPSGMEVPFAPTTTQEAASVMESHGGGSDATEPPSQPSGEVKAENLVSESQAAKVIVSVEDTVPTIFCGKIKGLSGVSTKNFSFRREDSVFQGSDANSPGEEALGNMEALRKPTKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK", "length": 523 }, "evidence": [ { "id": "F1SQQ4", "url": "https://omabrowser.org/oma/group/F1SQQ4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0LJM4-1", "protein_name": "Retinoic acid induced 2", "gene_name": "Rai2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDLQSQNLSMDMTDSPPTLANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSNAIHNNLFQGAEDSEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPTQGSLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPVPVPQSSESKFSPSFPKPPSSFGLHSFKGTQTTLEKDELKPLDILQPKEYFQLSRHTVIKMGGENEALDLSMKSVPWLKAGEASPPVFQEDAALDLSLAAHRKAEVPPETLYNTSGSADIQGHTLLEKRPSGMEMPFAPAKSREASAMMDSHSSSSNGTEMVSQPIHPGSELKPENNIEIVSESQAAKVIVSVEDAVPAIFCGKIKGLSGVSTKNFSFKREDSVLQGYDINSQEDESLGNTEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK", "length": 529 }, "evidence": [ { "id": "F1SQQ4", "url": "https://omabrowser.org/oma/group/F1SQQ4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BTV9-1", "protein_name": "Retinoic acid induced 2", "gene_name": "RAI2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEELYKETPNLPMDVTSPPAAMANNKLENGVAQLITAEAWNINSADLMKKALSPLVTVPAPSILTPPAESQSGVALKVAATVLQPICLGDSPVVLPIHLQVAGSAAPQMPASNATPYVMTTQGPVPLPVLLEQHVFQHLNSPLVLPPGTACPASPLHGSLFPGASAPVSQPQLLDPKPSGPGQEPVLPPVFQTPGFAAVLQDLFPSGQGALGSAPCQPPPDYATLPPQAFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPVPIPMPHGAEAKVAPDPPKPPVFTPQPCKGTQTPLEKEETKPFDLVHQRDFSQLSRHTVIKMGSENEALDLSMKGPPVPRACEAAPPPPSPDDGALDLSLSSCRKPGGPHGETAGSGPSAEGSPQDKPATPFAPSKAPEAAGKAEGRVVGPGSGELLRPPQKWLVEPAGRAACEPKAGGNNIEIVSTSQTAKVIVSVKDAVPAIFCGKIKGLSGVSTKNFSFKRDMPQDSVLQCYDVKSQPEPRDNAEALRKPVKNRSVKLKKMNSPEIHILPIKKQRLAAFFPRK", "length": 548 }, "evidence": [ { "id": "F1SQQ4", "url": "https://omabrowser.org/oma/group/F1SQQ4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9QVY8-1", "protein_name": "Retinoic acid-induced protein 2", "gene_name": "Rai2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDDLQSQNLSMDMTDSPPTLANNRLENRMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSNAIHNNLFQGAEDSEAQPQLLDLRIPSQPQEPALPFEAVLQNLFPTQGSLGPPPCQPPPGYAPVPPQPFNSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPVPVPQSTESKFSPTFPKPPSSFGLHSFKGTQTTLEKDELKPLDILQSKEYFQLSRHTVIKMGSENEALDLSMKSVPWLKAGEASPPVFQEDAALDLSLAAHRKAEAPPETLYNNSGSADIQGHTILEKLSSGMEMPFAPAKCSEASAMMESHSSNSNGTEMVSQPSHPGSELKAENNIEILSESQAAKVIVSVEDAVPAIFCGKIKGLSGVSTKNFSFKREDSVLQGYDINSQGEESLGNAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK", "length": 529 }, "evidence": [ { "id": "F1SQQ4", "url": "https://omabrowser.org/oma/group/F1SQQ4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y5P3-1", "protein_name": "Retinoic acid-induced protein 2", "gene_name": "RAI2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDDLQSQNLSMDMTDSPPALANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSSTIHNNLFQGAEDPEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPSQGTLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPIPMPQSSESKFSSSFPKPPSSFGLHPFKGTQTPLEKDELKPFDILQPKEYFQLSRHTVIKMGSENEALDLSMKSVPWLKAGEVSPPIFQEDAALDLSVAAHRKSEPPPETLYDSGASVDSSGHTVMEKLPSGMEISFAPATSHEAPAMMDSHISSSDAATEMLSQPNHPSGEVKAENNIEMVGESQAAKVIVSVEDAVPTIFCGKIKGLSGVSTKNFSFKREDSVLQGYDINSQGEESMGNAEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK", "length": 530 }, "evidence": [ { "id": "F1SQQ4", "url": "https://omabrowser.org/oma/group/F1SQQ4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SQQ4", "url": "https://www.uniprot.org/uniprotkb/F1SQQ4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "animal organ development", "id": "GO:0048513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048513", "evidence": [ { "database": "UniProtKB", "id": "F1SQQ4", "url": "https://www.uniprot.org/uniprotkb/F1SQQ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 109, "end_pos": 111, "annotation": "n_glycosylation_sequon" }, { "start_pos": 41, "end_pos": 43, "annotation": "n_glycosylation_sequon" }, { "start_pos": 466, "end_pos": 468, "annotation": "n_glycosylation_sequon" }, { "start_pos": 501, "end_pos": 503, "annotation": "n_glycosylation_sequon" }, { "start_pos": 8, "end_pos": 10, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SQQ4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 531, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SQQ4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SQQ4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 109, "end_pos": 111 }, { "start_pos": 41, "end_pos": 43 }, { "start_pos": 466, "end_pos": 468 }, { "start_pos": 501, "end_pos": 503 }, { "start_pos": 8, "end_pos": 10 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU90-1", "uniprot_ac": "F1SU90", "uniprot_id": "F1SU90_PIG", "mass": { "chemical_mass": 62863.0, "monoisotopic_mass": 62863.0 }, "refseq": {}, "gene_names": [ { "name": "TMEM87B", "type": "recommended", "evidence": [ { "id": "F1SU90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ] } ], "protein_names": [ { "name": "Transmembrane protein 87B", "type": "synonym", "evidence": [ { "id": "F1SU90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM87B", "url": "https://www.uniprot.org/uniprotkb/F1SU90", "locus": { "chromosome": "3", "start_pos": 44279435, "end_pos": 44327730, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026954", "url": "https://www.ensembl.org/id/ENSSSCG00000026954" } ] } } ], "crossref": [ { "id": "F1SU90", "url": "https://alphafold.ebi.ac.uk/entry/F1SU90", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026954", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026954", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100737870", "url": "https://www.ncbi.nlm.nih.gov/gene/100737870", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009637", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009637", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053937", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053937", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR054101", "url": "https://www.ebi.ac.uk/interpro/entry/IPR054101", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737870", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737870", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RTENCTP", "url": "https://omabrowser.org/oma/group/RTENCTP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SU99", "url": "https://www.orthodb.org/?gene=F1SU99", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21229", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21229", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21229:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21229:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06814", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06814", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21901", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21901", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QN09", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN09", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QN09-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN09-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNN4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNN4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QNN4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNN4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPC2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPC2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPC2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPC2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0A6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0A6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0A6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0A6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU90-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU99", "url": "https://www.uniprot.org/uniprotkb/F1SU99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU99-1", "url": "https://www.uniprot.org/uniprotkb/F1SU99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIG4", "url": "https://www.uniprot.org/uniprotkb/I3LIG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LIG4-1", "url": "https://www.uniprot.org/uniprotkb/I3LIG4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASAARAGFWFLPTGGPVLRVALCLLCWGPAAVGAVPELGLWAATVNDKSGPLIFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLEYHTCHNQYSELEELSRKHKLSVDEDFCGHYFKNRECWTTKTEKLDCNSDLQLFPSLHNKEQITNTRNVSNQEGSMDVVARTQRDGFHIFIVSIKTEKTDADWNLNVSLSMMGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYAEYQNINSTGLSTQGLLIFAELISSVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGLLYFIFAAIEGVMRVIGGSNHLADLVLLASLPLSLLDSGLCWWIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 551, "header": "tr|F1SU90-1|F1SU90_PIG Isoform 1 of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=3 CANONICAL=F1SU90-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QN09-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#A0A5G2QN09-1", "sequence": { "sequence": "MFCRTAGFWFLPTGGPVLRVALCLLCWGPAAVGAVPELGLWAATVNDKSGPLIFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLEYHTCHNQYSELEELSRKHKLSVDEDFCGHYFKNRECWTTKTEKLDCNSDLQLFPSLHNKEQITNTRNVSNQEGSMSLSMMGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYAEYQNINSTGLSTQGLLIFAELISSVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGLLYFIFAAIEGVMRVIGGSNHLAVVLGDIILAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 517, "header": "tr|A0A5G2QN09-1|F1SU90_PIG Computationally mapped isoform of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=2 CANONICAL=F1SU90-1" }, "locus": { "chromosome": "3", "start_pos": 44327632, "end_pos": 44282836, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081670.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081670.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065433.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065433.2" } ] } }, { "isoform_ac": "A0A5G2QNN4-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#A0A5G2QNN4-1", "sequence": { "sequence": "MASAARAGFWFLPTGGPVLRVALCLLCWGPAAVGAVPELGLWAATVNDKSGPLIFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLEYHTCHNQYSELEELSRKHKLSVDEDFCGHYFKNRECWTTKTEKLDCNSDLQLFPSLHNKEQITNTRNVSNQEGSMDVVARTQRDGFHIFIVSIKTEKTDADWNLNVSLSMMGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYAEYQNINSTGLSTQGLLIFAELISSVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGLLYFIFAAIEGVMRVIGGSNHLAVVLGDIILAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFVRDLLEVALISLHIRNFRFAVFFWFC", "length": 528, "header": "tr|A0A5G2QNN4-1|F1SU90_PIG Computationally mapped isoform of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=1 CANONICAL=F1SU90-1" }, "locus": { "chromosome": "3", "start_pos": 44327632, "end_pos": 44285629, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089097.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089097.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059917.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059917.1" } ] } }, { "isoform_ac": "A0A5G2QPC2-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#A0A5G2QPC2-1", "sequence": { "sequence": "MILILCFWPASLCLFLILACAGGFFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 209, "header": "tr|A0A5G2QPC2-1|F1SU90_PIG Computationally mapped isoform of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=2 CANONICAL=F1SU90-1" }, "locus": { "chromosome": "3", "start_pos": 44300279, "end_pos": 44282836, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084201.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084201.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065916.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065916.2" } ] } }, { "isoform_ac": "A0A5G2R0A6-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#A0A5G2R0A6-1", "sequence": { "sequence": "MASAARAGFWFLPTGGPVLRVALCLLCWGPAAVGAVPELGLWAATVNDKSGPLIFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLEYHTCHNQYSELEELSRKHKLSVDEDFCGHYFKNRECWTTKTEKLDCNSDLQLFPSLHNKEQITNTRNVSNQEGSMDVVARTQRDGFHIFIVSIKTEKTDADWNLNVSLSMMGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYAEYQNINSTGLSTQGLLIFAELISSVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGLLYFIFAAIEGVMRVIGGSNHLAVVLGDIILAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 549, "header": "tr|A0A5G2R0A6-1|F1SU90_PIG Computationally mapped isoform of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=1 CANONICAL=F1SU90-1" }, "locus": { "chromosome": "3", "start_pos": 44327632, "end_pos": 44282836, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076820.1", "url": "https://www.ensembl.org/id/ENSSSCT00000076820.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070547.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070547.1" } ] } }, { "isoform_ac": "F1SU90-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#F1SU90-1", "sequence": { "sequence": "MASAARAGFWFLPTGGPVLRVALCLLCWGPAAVGAVPELGLWAATVNDKSGPLIFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLEYHTCHNQYSELEELSRKHKLSVDEDFCGHYFKNRECWTTKTEKLDCNSDLQLFPSLHNKEQITNTRNVSNQEGSMDVVARTQRDGFHIFIVSIKTEKTDADWNLNVSLSMMGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYAEYQNINSTGLSTQGLLIFAELISSVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGLLYFIFAAIEGVMRVIGGSNHLADLVLLASLPLSLLDSGLCWWIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 551, "header": "tr|F1SU90-1|F1SU90_PIG Isoform 1 of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=3 CANONICAL=F1SU90-1" }, "locus": { "chromosome": "3", "start_pos": 44327632, "end_pos": 44282836, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008876.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008876.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008650.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008650.4" } ] } }, { "isoform_ac": "F1SU99-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#F1SU99-1", "sequence": { "sequence": "MASAARAGFWFLPTGGPVLRVALCLLCWGPAAVGAVPELGLWAATVNDKSGPLIFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLEYHTCHNQYSELEELSRKHKLSVDEDFCGHYFKNRECWTTKTEKLDCNSDLQLFPSLHNKEQITNTRNVSNQEGSMDVVARTQRDGFHIFIVSIKTEKTDADWNLNVSLSMMGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYAEYQNINSTGLSTQGLLIFAELISSVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGLLYFIFAAIEGVMRVIGANDSDLVLLASLPLSLLDSGLCWWIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 549, "header": "tr|F1SU99-1|F1SU99_PIG Computationally mapped isoform of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=2 CANONICAL=F1SU90-1" }, "locus": { "chromosome": "3", "start_pos": 44327632, "end_pos": 44282836, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008875.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008875.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008649.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008649.3" } ] } }, { "isoform_ac": "I3LIG4-1", "url": "https://www.uniprot.org/uniprotkb/F1SU90/entry#I3LIG4-1", "sequence": { "sequence": "MASAARAGFWFLPTGGPVLRVALCLLCWGPAAVGAVPELGLWAATVNDSCSGPVKFTIEWHLEYHTCHNQYSELEELSRKHKLSVDEDFCGHYFKNRECWTTKTEKLDCNSDLQLFPSLHNKEQITNTRNVSNQEGSMDVVARTQRDGFHIFIVSIKTEKTDADWNLNVSLSMMGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYAEYQNINSTGLSTQGLLIFAELISSVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVVGLGLLYFIFAAIEGVMRVIGGSNHLAVVLGDIILAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAILASVVFMVWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRVSKTVSNGTAKLTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 525, "header": "tr|I3LIG4-1|I3LIG4_PIG Computationally mapped isoform of Transmembrane protein 87B OS=Sus scrofa OX=9823 GN=TMEM87B PE=3 SV=3 CANONICAL=F1SU90-1" }, "locus": { "chromosome": "3", "start_pos": 44327632, "end_pos": 44282836, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029355.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029355.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023869.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023869.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QN09", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN09" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100737870", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737870", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2M5R1-1", "protein_name": "Transmembrane protein 87B isoform X1", "gene_name": "Tmem87b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAACRSSAWLPPGLLGRLPAPAQLLRVALCLLCWAPAAVDAVPELGLWTRTVNDKSGPLIFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLKYHTCHNEYSDLEEELSQKHALNADTDFCAYFKNIDCWTTKSENLDCNSDLQAFPSLNNKELTGSRNVSSQEGSMDVVAKTQKDGFHIFIISIKTEKTDAVWNLNVSLSMVGPHGYISASDWPLMIFYMVMCIVYILYGVLWLMWSACYWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAIEGVMRVIGGSKHLAVVLSDITLAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEVEEFMVTSENLTEGIKLRASKTVSNGTAKPTCDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEIAEKMFSSEKIM", "length": 555 }, "evidence": [ { "id": "F1SU90", "url": "https://omabrowser.org/oma/group/F1SU90/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4A7B6-1", "protein_name": "Transmembrane protein 87B", "gene_name": "Tmem87b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAACRSMASLLPGLLCRLPAGAQMLRVALCLLCWVPAAVDAVPELGLWTRTVNDKSGPLIFRKTMFNSTDIRFSVKSFSCSGPVKFTIEWHLKYHTCHNEYPELEEELFQKHELHADGDVCAYFKNIDCWTTKSENLDCSSDSQAFPSLNNKELTGIRNISSQEGSMDVVARTQKDGFHIFIVSIKTEKTDAIWDLNVSLSMVGPHGYISASDWPLMIFYMVMCIVYILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNINSTGLSTQGLLIFAELISALKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAIEGVMRVIGGSKHLAVALTDIVLAVIDSISVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEVEEFMVTSENLTEGIKLRASKTVSNGTAKPTSENFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEIAEKMFSSEKIM", "length": 555 }, "evidence": [ { "id": "F1SU90", "url": "https://omabrowser.org/oma/group/F1SU90/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8BKU8-1", "protein_name": "Transmembrane protein 87B", "gene_name": "Tmem87b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAACRSEAGLLPSLLCRRPAGAQLLRVALCLLCWVPAAVDAVPELGLWTRTVNDKSGPLVFRKTMFNSTEIKFSVKSFSCSGPVKFTIEWHLKYHTCHNDYPDLEEELSQRHELHADPDVCAYFKNIDCWTTKSENLDCSSDSQAFPSLNNKELTGIRNISSQEGSTDVVARTQKDGFHIFIVSIKTEKTDAVWDLNVSLSMVGPHGYISASDWPLMIFYMVMCIVYILYGVLWLLWSACYWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNINSTGLSTQGLLIFAELISAVKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAIEGVMRVIGGSKHLAVVLTDIVLAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFTNTLIFAVLASIVFMVWTTKTFRIAKCQSDWMELWVDDAFWSFLFSVILIVIMFLWRPSANNQRYAFMPLIDDSDDEVEEFMVTSENLTEGIKLRASKTVSNGTAKPTSDNFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEIAEKMFSSEKIM", "length": 555 }, "evidence": [ { "id": "F1SU90", "url": "https://omabrowser.org/oma/group/F1SU90/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96K49-1", "protein_name": "Transmembrane protein 87B", "gene_name": "TMEM87B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVAACRSVAGLLPRRRRCFPARAPLLRVALCLLCWTPAAVRAVPELGLWLETVNDKSGPLIFRKTMFNSTDIKLSVKSFHCSGPVKFTIVWHLKYHTCHNEHSNLEELFQKHKLSVDEDFCHYLKNDNCWTTKNENLDCNSDSQVFPSLNNKELINIRNVSNQERSMDVVARTQKDGFHIFIVSIKTENTDASWNLNVSLSMIGPHGYISASDWPLMIFYMVMCIVYILYGILWLTWSACYWKDILRIQFWIAAVIFLGMLEKAVFYSEYQNISNTGLSTQGLLIFAELISAIKRTLARLLVIIVSLGYGIVKPRLGTVMHRVIGLGLLYLIFAAVEGVMRVIGGSNHLAVVLDDIILAVIDSIFVWFIFISLAQTMKTLRLRKNTVKFSLYRHFKNTLIFAVLASIVFMGWTTKTFRIAKCQSDWMERWVDDAFWSFLFSLILIVIMFLWRPSANNQRYAFMPLIDDSDDEIEEFMVTSENLTEGIKLRASKSVSNGTAKPATSENFDEDLKWVEENIPSSFTDVALPVLVDSDEEIMTRSEMAEKMFSSEKIM", "length": 555 }, "evidence": [ { "id": "F1SU90", "url": "https://omabrowser.org/oma/group/F1SU90/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VQ34-1", "protein_name": "GOST seven transmembrane domain-containing protein", "gene_name": "Dmel\\CG17660", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MQGSATLLVVALALLLGPASTAGKSDPGMVDVLVTTDLPSIREQRPLLANTKIYAQIKGCTSNVESNLTITFRLTEHPCIFDDRTLQAIAQNATLQKNATINNVITEITRTYPCNGLIVLAINKDKVVEGSAIPTPEPKHPMLEHKHPLSPTTNPIASVKEDGIYEIEVNIAAGPSAQFSAVVHIEFLGPHGFISAIDWPFLPFYLIMCIVYVIFGIIWLFVSFAQWRDLLRIQFWIGGVILLGMLEKAFFYAEYQTLTNKGVAVQHAELVAEFVSCAKRTLARMLVIIMSLGFGIVKPRLGPMLHRVVGVGTLYFVLACVESYLRITNVKTDRSELLVASIPLAVLDTGICWWIFTSLVQTTRTLRLRRNMVKLSLYRHFTNTLIFAVIASVIFMLFALRLRRVENCTPGWRDIWVDTGFWHILFSVLLLVIMILWRPTNNNQRYAFTPLLDNPEDEDDEDEEDQFVADAYGVKMRGQNGTPKTSTTSRNATTTEEDDLRWVEENIPSSMADSALPILDSDEEIINTKFEVSKMQ", "length": 536 }, "evidence": [ { "id": "F1SU90", "url": "https://omabrowser.org/oma/group/F1SU90/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ], "pmid": "" }, { "name": "Golgi cisterna membrane", "id": "GO:0032580", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032580", "evidence": [ { "database": "UniProtKB", "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "retrograde transport, endosome to Golgi", "id": "GO:0042147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042147", "evidence": [ { "database": "UniProtKB", "id": "F1SU90", "url": "https://www.uniprot.org/uniprotkb/F1SU90" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 154, "end_pos": 156, "annotation": "n_glycosylation_sequon" }, { "start_pos": 192, "end_pos": 194, "annotation": "n_glycosylation_sequon" }, { "start_pos": 269, "end_pos": 271, "annotation": "n_glycosylation_sequon" }, { "start_pos": 479, "end_pos": 481, "annotation": "n_glycosylation_sequon" }, { "start_pos": 494, "end_pos": 496, "annotation": "n_glycosylation_sequon" }, { "start_pos": 61, "end_pos": 63, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SU90-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 551, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SU90-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SU90" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SU90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU90" }, { "id": "PF06814", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06814" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "GOST seven transmembrane", "eco_id": "ECO_0000259", "start_pos": 210, "end_pos": 455, "start_aa": "Pro", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SU90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU90" }, { "id": "PF21901", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21901" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TMEM87A/B GOLD", "eco_id": "ECO_0000259", "start_pos": 37, "end_pos": 180, "start_aa": "Pro", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 154, "end_pos": 156 }, { "start_pos": 192, "end_pos": 194 }, { "start_pos": 269, "end_pos": 271 }, { "start_pos": 479, "end_pos": 481 }, { "start_pos": 494, "end_pos": 496 }, { "start_pos": 61, "end_pos": 63 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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}, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8C8-1", "uniprot_ac": "I3L8C8", "uniprot_id": "I3L8C8_PIG", "mass": { "chemical_mass": 17450.0, "monoisotopic_mass": 17450.0 }, "refseq": {}, "gene_names": [ { "name": "LDLRAD1", "type": "recommended", "evidence": [ { "id": "I3L8C8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8C8" } ] } ], "protein_names": [ { "name": "Low density lipoprotein receptor class A domain containing 1", "type": "synonym", "evidence": [ { "id": "I3L8C8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8C8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8C8", "url": "https://www.uniprot.org/uniprotkb/I3L8C8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LDLRAD1", "url": "https://www.uniprot.org/uniprotkb/I3L8C8", "locus": { "chromosome": "6", "start_pos": 158303012, "end_pos": 158292616, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027641", "url": "https://www.ensembl.org/id/ENSSSCG00000027641" } ] } } ], "crossref": [ { "id": "I3L8C8", "url": "https://alphafold.ebi.ac.uk/entry/I3L8C8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000027641", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027641", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00112", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00112", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002172", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002172", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023415", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023415", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036055", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036055", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050685", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050685", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057430", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057430", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24270", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24270", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00057", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00057", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF25241", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25241", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QQ08", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ08", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ08-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ08-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8C8", "url": "https://www.uniprot.org/uniprotkb/I3L8C8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8C8-1", "url": "https://www.uniprot.org/uniprotkb/I3L8C8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNKIFPQGEGNAAAGPKALSGGEGAQACVTPLNRTGFLCHNRRSCIPASRVCDGVPTCAHGEDEEEALCRDVPQSLPSFLVAHCGDPAFWIYSDQKCDGFNNCGDCSDELSPVTTCPPCGPEWWRCPSTVFKYCTCIPRSLCRDHVQHCSDWSDEYSCPGP", "length": 161, "header": "tr|I3L8C8-1|I3L8C8_PIG Isoform 1 of Low density lipoprotein receptor class A domain containing 1 OS=Sus scrofa OX=9823 GN=LDLRAD1 PE=4 SV=3 CANONICAL=I3L8C8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQ08-1", "url": "https://www.uniprot.org/uniprotkb/I3L8C8/entry#A0A5G2QQ08-1", "sequence": { "sequence": "MNKIFPQGEGNAAAGPKALSGGEGDVPQSLPSFLVAHCGDPAFWIYSDQKCDGFNNCGDCSDELSPVTTCPPCGPEWWRCPSTVFKYCTCIPRSLCRDHVQHCSDWSDEYSCPGP", "length": 115, "header": "tr|A0A5G2QQ08-1|I3L8C8_PIG Computationally mapped isoform of Low density lipoprotein receptor class A domain containing 1 OS=Sus scrofa OX=9823 GN=LDLRAD1 PE=4 SV=1 CANONICAL=I3L8C8-1" }, "locus": { "chromosome": "6", "start_pos": 158302012, "end_pos": 158292886, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068732.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068732.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066980.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066980.1" } ] } }, { "isoform_ac": "I3L8C8-1", "url": "https://www.uniprot.org/uniprotkb/I3L8C8/entry#I3L8C8-1", "sequence": { "sequence": "MNKIFPQGEGNAAAGPKALSGGEGAQACVTPLNRTGFLCHNRRSCIPASRVCDGVPTCAHGEDEEEALCRDVPQSLPSFLVAHCGDPAFWIYSDQKCDGFNNCGDCSDELSPVTTCPPCGPEWWRCPSTVFKYCTCIPRSLCRDHVQHCSDWSDEYSCPGP", "length": 161, "header": "tr|I3L8C8-1|I3L8C8_PIG Isoform 1 of Low density lipoprotein receptor class A domain containing 1 OS=Sus scrofa OX=9823 GN=LDLRAD1 PE=4 SV=3 CANONICAL=I3L8C8-1" }, "locus": { "chromosome": "6", "start_pos": 158302012, "end_pos": 158292886, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024167.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024167.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020288.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020288.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQ08", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ08" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3L8C8", "url": "https://www.uniprot.org/uniprotkb/I3L8C8" } ], "pmid": "" }, { "name": "endomembrane system", "id": "GO:0012505", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0012505", "evidence": [ { "database": 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"strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030672", "url": "https://www.ensembl.org/id/ENSSSCG00000030672" } ] } } ], "crossref": [ { "id": "I3L9Y4", "url": "https://alphafold.ebi.ac.uk/entry/I3L9Y4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030672", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030672", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050888", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050888", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24406", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24406", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QQ65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQ65-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ65-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6V8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6V8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6V8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6V8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9Y4-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "PALVLMAASLGDTSHRRREKRRQLDARRSKCRIRLGGHMEQWCLLKEQLGFSLHSQLAKFLLDRYTSSGCRLCAGPEPVPPKGLQYLVLLSHAHSRECSLVPGLRGPGGQNGGLVWECSAGHTFSWGPSSGPTPPEEPSPVPLPSTDQRNWCPEARSGQEPAGLESEHDDRTQEANLARGVEPPLETFPPIGEEDGEEEDEDEEEMLSDASLWTYSSSPDDSEPDAPILPPSPVTHALKEGEIPSAPEAVPTPLAVPSSSASSLSSGAPLPVEVRIQPELSGTPQAAQQTELLASPGSQAKSALASACDEDTAQIGPKRIRKAAKRELLPCDFPGCGRIFSNRQYLNVRDHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHVKLHSDTRDYICEFCARSFRTSSNLVIHRRIHTGEKPLQCEICGFTCRQKASLNWHRRKHAETAAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPLESCSSISAPASLEASEGSRPSMAPQAPTLLPQ", "length": 521, "header": "tr|I3L9Y4-1|I3L9Y4_PIG Isoform 1 of Zinc finger protein 692 OS=Sus scrofa OX=9823 GN=ZNF692 PE=3 SV=3 CANONICAL=I3L9Y4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQ65-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4/entry#A0A5G2QQ65-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCP00000067036.1" } ] } }, { "isoform_ac": "A0A5G2R6V8-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4/entry#A0A5G2R6V8-1", "sequence": { "sequence": "MAASLGDTSHRRREKRRQLDARRSKCRIRLGGHMEQWCLLKEQLGFSLHSQLAKFLLDRYTSSGCRLCAGPEPVPPKGLQYLVLLSHAHSRECSLVPGLRGPGGQNGGLVWECSAGHTFSWGPSSGPTPPEEPSPVPLPSTDQRNWCPEARSGQEPAGLESEHDDRTQEANLASSEPDAPILPPSPVTHALKEGEIPSAPEAVPTPLAVPSSSASSLSSGAPLPVEVRIQPELSGTPQAAQQTELLASPGSQAKSALASACDEDTAQIGPKRIRKAAKRELLPCDFPGCGRIFSNRQYLNVRDHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHVKLHSDTRDYICEFCARSFRTSSNLVIHRRIHTGEKPLQCEICGFTCRQKASLNWHRRKHAETAAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPLESCSSISAPASLEASEGSRPSMAPQAPTLLPQ", "length": 474, "header": "tr|A0A5G2R6V8-1|A0A5G2R6V8_PIG Computationally mapped isoform of Zinc finger protein 692 OS=Sus scrofa OX=9823 GN=ZNF692 PE=3 SV=1 CANONICAL=I3L9Y4-1" }, "locus": { "chromosome": "2", "start_pos": 52296970, "end_pos": 52289430, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069406.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069406.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072987.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072987.1" } ] } }, { "isoform_ac": "I3L9Y4-1", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4/entry#I3L9Y4-1", "sequence": { "sequence": "PALVLMAASLGDTSHRRREKRRQLDARRSKCRIRLGGHMEQWCLLKEQLGFSLHSQLAKFLLDRYTSSGCRLCAGPEPVPPKGLQYLVLLSHAHSRECSLVPGLRGPGGQNGGLVWECSAGHTFSWGPSSGPTPPEEPSPVPLPSTDQRNWCPEARSGQEPAGLESEHDDRTQEANLARGVEPPLETFPPIGEEDGEEEDEDEEEMLSDASLWTYSSSPDDSEPDAPILPPSPVTHALKEGEIPSAPEAVPTPLAVPSSSASSLSSGAPLPVEVRIQPELSGTPQAAQQTELLASPGSQAKSALASACDEDTAQIGPKRIRKAAKRELLPCDFPGCGRIFSNRQYLNVRDHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHVKLHSDTRDYICEFCARSFRTSSNLVIHRRIHTGEKPLQCEICGFTCRQKASLNWHRRKHAETAAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPLESCSSISAPASLEASEGSRPSMAPQAPTLLPQ", "length": 521, "header": "tr|I3L9Y4-1|I3L9Y4_PIG Isoform 1 of Zinc finger protein 692 OS=Sus scrofa OX=9823 GN=ZNF692 PE=3 SV=3 CANONICAL=I3L9Y4-1" }, "locus": { "chromosome": "2", "start_pos": 52296970, "end_pos": 52289250, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024881.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024881.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020848.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020848.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 133, "start_aa": "Thr", "end_pos": 133, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr133", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQ65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQ65" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "DNA-binding transcription activator activity, RNA polymerase II-specific", "id": "GO:0001228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001228", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "regulation of primary metabolic process", "id": "GO:0080090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0080090", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "regulation of macromolecule metabolic process", "id": "GO:0060255", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060255", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" }, { "name": "regulation of gluconeogenesis", "id": "GO:0006111", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006111", "evidence": [ { "database": "UniProtKB", "id": "I3L9Y4", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L9Y4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 521, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L9Y4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L9Y4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L9Y4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9Y4" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 363, "end_pos": 392, "start_aa": "Phe", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 133 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L9E6-1", "uniprot_ac": "I3L9E6", "uniprot_id": "I3L9E6_PIG", "mass": { "chemical_mass": 75803.0, "monoisotopic_mass": 75803.0 }, "refseq": { "ac": "XP_003359024", "name": "C2 domain-containing protein 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359024" }, "gene_names": [ { "name": "C2CD2", "type": "recommended", "evidence": [ { "id": "I3L9E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9E6" } ] }, { "name": "C2CD2", "type": "synonym", "evidence": [ { "id": "XP_003359024", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359024" } ] } ], "protein_names": [ { "name": "C2 calcium dependent domain containing 2", "type": "synonym", "evidence": [ { "id": "I3L9E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9E6/entry#names_and_taxonomy" } ] }, { "name": "C2 domain-containing protein 2", "type": "synonym", "evidence": [ { "id": "XP_003359024", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359024" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L9E6", "url": "https://www.uniprot.org/uniprotkb/I3L9E6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C2CD2", "url": "https://www.uniprot.org/uniprotkb/I3L9E6", "locus": { "chromosome": "13", "start_pos": 205246716, "end_pos": 205313717, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025821", "url": "https://www.ensembl.org/id/ENSSSCG00000025821" } ] } } ], "crossref": [ { "id": "ENSSSCG00000025821", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025821", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21682", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21682", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100628208", "url": "https://www.ncbi.nlm.nih.gov/gene/100628208", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039934", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039934", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040885", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040885", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100628208", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628208", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QEKVVTC", "url": "https://omabrowser.org/oma/group/QEKVVTC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L9E6", "url": "https://www.orthodb.org/?gene=I3L9E6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21119", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21119", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21119:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21119:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18696", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18696", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003359024", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359024", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QQD5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQD5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QQD5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQD5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6Y1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6Y1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6Y1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6Y1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAB8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FAB8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FAB8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9E6", "url": "https://www.uniprot.org/uniprotkb/I3L9E6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9E6-1", "url": "https://www.uniprot.org/uniprotkb/I3L9E6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSLGSWLGEVQWLVLVGLFVVALGTVGLYLAQWALASARPRSPRRAAEPGEGQRPESDALLAWILTLNSWRSQWQAAWVTALNDEAKRKGGPLNLSFQADPLQQPLELAVQEVSSVARSAQEKVVFCHVVGDSIQFLVSAGPASAGDAGRPVYGVRLSPLHLQLELHMKEKREDIQIKWSFISAPEMAVGTQPKAPGEDQAVGTDAVSESLKDALKHLVSSASPSVVLSTKPADVREIQHPQRTPSTQESCPPKPPRAHELKLLVRNIRASLLSRPGASGSIRPVCVVQLNDPAQKFSSAVSRTTTALTWDEEFAFELNAKSRELHLQISEDGPSSEGLLAMTTVPLDLFKKQPSGPQSFTLTSGSSWGSSALGSVTAEFSYVEPSEAKSWQIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRFDAGRATPPSSESPLRTPVKVKVVEKDISVQAIACHGAPVSKTFSSSDTELLVLNGTDLVAEVAIRQLSESSKLKLKSPRKKSTIIISGVSKTSLSQDNDAALMLDYAASMDSARQEDTLDQPSAAAAASDPPVEEQEEEGAAAVAAASAGAPPALEPQESELDCWDLEKEPQAGAWGGQGPPDLDGDELSESSLSVSELEPGAAKKHKGGILRKGAKLFFRRRHQQKDPGLSQSHNDLVFLQQPEGGRRKGATLARILNRKLLSRHRGQSTVNGAPEDPGP", "length": 709, "header": "tr|I3L9E6-1|I3L9E6_PIG Isoform 1 of C2 calcium dependent domain containing 2 OS=Sus scrofa OX=9823 GN=C2CD2 PE=1 SV=2 CANONICAL=I3L9E6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QQD5-1", "url": "https://www.uniprot.org/uniprotkb/I3L9E6/entry#A0A5G2QQD5-1", "sequence": { "sequence": "MSSLGSWLGEVQWLVLVGLFVVALGTVGLYLAQWALASARPRSPRRAAEPGEGQRPESDALLAWILTLNSWRSQWQAAWVTALNDEAKRKGGPLNLSFQADPLQQPLELAVQEVSSVARSAQEKVVFCHVVGDSIQFLVSAGPASAGDAGRPVYGVRLSPLHLQLELHMKEKREDIQIKWSFISAPEMAVGTQPKAPGEDQAVGTDAVSESLKDALKHLVSSASPSVVLSTKPADVREIQHPQRTPSTQESCPPKPPRAHELKLLVRNIRASLLSRPGASGSIRPVCVVQLNDPAQKFSSAVSRTTTALTWDEEFAFELNAKSRELHLQISEDGPSSEGLLAMTTVPLDLFKKQPSGPQSFTLTSGSSWGSSALGSVTAEVRGHSLWGHIQLDLLGTKEDRTCNLMVPSRIHFQSPLRTPVKVKVVEKDISVQAIACHGAPVSKTFSSSDTELLVLNGTDLVAEVAIRQLSESSKLKLKSPRKKSTIIISGVSKTSLSQDNDAALMLDYAASMDSARQEDTLDQPSAAAAASDPPVEEQEEEGAAAVAAASAGAPPALEPQESELDCWDLEKEPQAGAWGGQGPPDLDGDELSESSLSVSELEPGAAKKHKGGILRKGAKLFFRRRHQQKDPGLSQSHNDLVFLQQPEGGRRKGATLARILNRKLLSRHRGQSTVNGAPEDPGP", "length": 684, "header": "tr|A0A5G2QQD5-1|I3L9E6_PIG Computationally mapped isoform of C2 calcium dependent domain containing 2 OS=Sus scrofa OX=9823 GN=C2CD2 PE=1 SV=1 CANONICAL=I3L9E6-1" }, "locus": { "chromosome": "13", "start_pos": 205313471, "end_pos": 205250688, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078925.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078925.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066942.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066942.1" } ] } }, { "isoform_ac": "A0A5G2R6Y1-1", "url": "https://www.uniprot.org/uniprotkb/I3L9E6/entry#A0A5G2R6Y1-1", "sequence": { "sequence": "MSSLGSWLGEVQWLVLVGLFVVALGTVGLYLAQWALASARPRSPRRAAEPGEGQRPESDALLAWILTLNSWRSQWQAAWVTALNDEAKRKGGPLNLSFQADPLQQPLELAVQEVSSVARSAQEKVVFCHVVGDSIQFLVSAGPASAGDAGRPVYGVRLSPLHLQLELHMKEKREDIQIKWSFISAPEMAVGTQPKAPGEDQAVGTDAVSESLKDALKHLVSSASPSVVLSTKPADVREIQHPQRTPSTQESCPPKPPRAHELKLLVRNIRASLLSRPGASGSIRPVCVVQLNDPAQKFSSAVSRTTTALTWDEEFAFELNAKSRELHLQISEDGPSSEGLLAMTTVPLDLFKKQPSGPQSFTLTSGSSWGSSALGSVTAEFSYVEPSEAKSWQIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRFDAGRATPPSSESPLRTPVKVKVVEKDISVQAIACHGAPVSKTFSSSDTELLVLNGTDLVAEVAIRQLSESSKLKLKSPRKKSTIIISGVSKTSLSQDNDAALMLDYAASMDSARQEDTLDQPSAAAAASDPPVEEQEEEGAAAVAAASAGAPPALEPQESELDCWDLEKEPQAGAWGGQGPPDLDGDELSESSLSVSELEPGAAKKHKEDRYANQH", "length": 644, "header": "tr|A0A5G2R6Y1-1|A0A5G2R6Y1_PIG Computationally mapped isoform of C2 calcium dependent domain containing 2 OS=Sus scrofa OX=9823 GN=C2CD2 PE=1 SV=1 CANONICAL=I3L9E6-1" }, "locus": { "chromosome": "13", "start_pos": 205313471, "end_pos": 205257554, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067423.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067423.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069887.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069887.1" } ] } }, { "isoform_ac": "A0A8W4FAB8-1", "url": "https://www.uniprot.org/uniprotkb/I3L9E6/entry#A0A8W4FAB8-1", "sequence": { "sequence": "MSSLGSWLGEVQWLVLVGLFVVALGTVGLYLAQWALASARPRSPRRAAEPGEGQRPESDALLAWILTLNSWRSQWQAAWVTALNDEAKRKGGPLNLSFQADPLQQPLELAVQEVSSVARSAQEKVVFCHVVGDSIQFLVSAGPASAGDAGRPVYGVRLSPLHLQLELHMKEKREDIQIKWSFISAPEMAVGTQPKAPGEDQAVGTDAVSESLKDALKHLVSSASPSVVLSTKPADVREIQHPQRTPSTQESCPPKPPRAHELKLLVRNIRASLLSRPGASGSIRPVCVVQLNDPAQKFSSAVSRTTTALTWDEEFAFELNAKSRELHLQISEDGPSSEGLLAMTTVPLDLFKKQPSGPQSFTLTSGSSWGSSALGSVTAEVRGHSLWGHIQLDLLGTKEDRTCNLMVPSRIHFQSPLRTPVKVKVVEKDISVQAIACHGAPVSKTFSSSDTELLVLNGTDLVAEVAIRQLSESSKLKLKSPRKKSTIIISGVSKTSLSQDNDAALMLDYAASMDSARQEDTLDQPSAAAAASDPPVEEQEEEGAAAVAAASAGAPPALEPQESELDCWDLEKEPQAGAWGGQGPPDLDGDELSESSLSVSELEPGAAKKEDLSHFRTVCRGGGQGAEAFPV", "length": 631, "header": "tr|A0A8W4FAB8-1|A0A8W4FAB8_PIG Computationally mapped isoform of C2 calcium dependent domain containing 2 OS=Sus scrofa OX=9823 GN=C2CD2 PE=1 SV=1 CANONICAL=I3L9E6-1" }, "locus": { "chromosome": "13", "start_pos": 205313471, "end_pos": 205259660, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105295.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105295.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075242.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075242.1" } ] } }, { "isoform_ac": "I3L9E6-1", "url": "https://www.uniprot.org/uniprotkb/I3L9E6/entry#I3L9E6-1", "sequence": { "sequence": "MSSLGSWLGEVQWLVLVGLFVVALGTVGLYLAQWALASARPRSPRRAAEPGEGQRPESDALLAWILTLNSWRSQWQAAWVTALNDEAKRKGGPLNLSFQADPLQQPLELAVQEVSSVARSAQEKVVFCHVVGDSIQFLVSAGPASAGDAGRPVYGVRLSPLHLQLELHMKEKREDIQIKWSFISAPEMAVGTQPKAPGEDQAVGTDAVSESLKDALKHLVSSASPSVVLSTKPADVREIQHPQRTPSTQESCPPKPPRAHELKLLVRNIRASLLSRPGASGSIRPVCVVQLNDPAQKFSSAVSRTTTALTWDEEFAFELNAKSRELHLQISEDGPSSEGLLAMTTVPLDLFKKQPSGPQSFTLTSGSSWGSSALGSVTAEFSYVEPSEAKSWQIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRFDAGRATPPSSESPLRTPVKVKVVEKDISVQAIACHGAPVSKTFSSSDTELLVLNGTDLVAEVAIRQLSESSKLKLKSPRKKSTIIISGVSKTSLSQDNDAALMLDYAASMDSARQEDTLDQPSAAAAASDPPVEEQEEEGAAAVAAASAGAPPALEPQESELDCWDLEKEPQAGAWGGQGPPDLDGDELSESSLSVSELEPGAAKKHKGGILRKGAKLFFRRRHQQKDPGLSQSHNDLVFLQQPEGGRRKGATLARILNRKLLSRHRGQSTVNGAPEDPGP", "length": 709, "header": "tr|I3L9E6-1|I3L9E6_PIG Isoform 1 of C2 calcium dependent domain containing 2 OS=Sus scrofa OX=9823 GN=C2CD2 PE=1 SV=2 CANONICAL=I3L9E6-1" }, "locus": { "chromosome": "13", "start_pos": 205313471, "end_pos": 205250688, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030786.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030786.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020658.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020658.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QQD5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QQD5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100628208", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100628208", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2L2I7-1", "protein_name": "C2 domain-containing protein 2 isoform X1", "gene_name": "c2cd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSSMEGVFSWVGDWQWLFMVTLFLASVVTLVVYLVLYFSNEAHDGKTHLNHVDSEEADGILCWVLSLKNWRSQWRRAWFRSLNEEACRSQSGIQLTFEDDGVQSSELAVDQISSFTKTRGQKNVLCQVVGNKLQFSLSAFPSSTTSQTPLRYSVKISPLHLQLALQMKEVNGEVEISWRVLHLDSVDLQLMPSFAQGDCQSLSDAAVTDRLRQVLNGAQASVSLSSRPAESAEVKEVRNKTLQATSPPKPPRAHEWKLLVKNIRVTFTQEDGAAGGMNPQCILQLDDPPQKINSSVLSNKSNPTWDQPFIFELSGRSKELNIQVVDNGKPVESGLLGQVSVPFDLVRKHPKGQQTFSLKTKDQVTGSITTEFTYLEPNEVRTWQTPTPAPTKRVEMDRTVMPCGTVVTTVTAVRSKPGRPLPPESKSPSKNKLAERRVSEQPSILGAKVSKALSSSDTELLILNGTDPVAEAAIRQLHESAKQKLKSPVKKSTIIISGVSKAPLSQDEEMSLMAGYAAAMDASMSGATEGTNSDPLPPEKVEENSIIEATESLVGANGTDHVEDWESQTGEDPDADKTSLSLCISETGSKKGKGSFLHKSAKLFFRRRHQRKEPGMSQSHNDLQYLEHPEAAVMGDREKRTATFRRIINRKLLPKSKSKTNGMLKEPPT", "length": 669 }, "evidence": [ { "id": "I3L9E6", "url": "https://omabrowser.org/oma/group/I3L9E6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0YBE3-1", "protein_name": "C2 calcium dependent domain containing 2", "gene_name": "C2CD2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAWPAGGLAELRWYALVALFVAALATLAVYLVQYALLALRRRRGKRRPPRQPPAAPRDELLEEGGSALAWALSLGSWRRQWRRAWVAALRGEAAARAVSAGLQDSQLLTFEEDDPAEPLELTVKQVVSVVKSVQEKVVSCNAVGDSITFIVSISSSSPTAAESRLYSVKLSPLHLQLHLYVKDKGDDVKVEWLLVNVDETNFEIQPMVQEEQGEGTCAISETLRDVLKNLFSSVTPSVVLSTRPTDIKEVQNVQNTSAIPQGTSPPKPPRAHELKLLVKNITVNLTDHSAAGSTNLVCVAQLNDPMQKFSSSVAKNAANPFWKEEFVFELSAKSKTLLLQIVEDGKLDSSSSARATIPLDLFRKQPSGHQSFALSSRASDGSPGLRPGRGSITAEFLFIEPSELKTWQASSPVPSTKVEKDRTVMPCGTVVTTVTAVKTKPRLEGRSSPLSTGSPVKTPVKVKVIEKDFSVQALHSHGAPVSKTLSSSDTELLILNGSDPVAEAAIRQLSESAKQKLKSPRKKSTIIISGVSKTSLSQDSEAALMMDYAAAMDSSCKEADPPPAGEEVIAKVTSDEKLLSGASETVPDTDPQQSAHTAWALENGSQQWDSNTLLDQSCEEMSGSSLSVSETGSVKKSKGGILRKSAKLFFRRRHHQKDPGMSQSHNDLTYLQQPLSEETRKKGGTLSRILNRKLLSKNKSKSKLNGASAELFA", "length": 713 }, "evidence": [ { "id": "I3L9E6", "url": "https://omabrowser.org/oma/group/I3L9E6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E9Q3C1-1", "protein_name": "C2 domain-containing protein 2", "gene_name": "C2cd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSWLSEVQWLFLVSLFVAALGTVGLYLAQWALAKARPPPRRRAEPDELRRRESDTLLSWILTRDSWGNQWQAAWVTALNYEAEKRGGPLRLSFQKDPRPQSLQLTVEKVSSVVKSTQEKVVICHVVGETLQFLVSAGPASATGSECQLYDVHLSPFHLKVEFHMEEKREDIQIRWSFTHVPETAIKIQPQAPGEKQALGVNMLSEALEDLFKHLVNAASPSVFLSTKPTQVKEAQSLQCPSSTAQEPCPPKPPRAHELKLQVKNIRVSLINHPGASGLSHVCVAQLNDPEQRFISTLVRNTTDLSWEEEFTFELNAKSKELVLQISQDGCSSEGLLGIATIHLDLFRKQPNGPQTFRLISGTEPDSLVLGSVTAEFSYVEPGELKSWPAPPPVSAAKIEKDRTVMPCGTVVTTVTAVKTKPRFDTGRATPLNSESPVRTPVTVKVIEKDISVQAISCHSAPVSKTFSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHNAALMLDYAASMDSTNQGDATSALCHPEATEASATTPPEENEPAQTLPALKPRENDLDSWELEKESPVASWSGPALQEPDGDELSESSLSTSELGAMKKHKGGLLRKGAKLFFRRRHQQKDPGLSQSHNDLVFLQQPEGRQKKGATLGRLLNRKLLTRHRGKHTMNGVPREPCI", "length": 696 }, "evidence": [ { "id": "I3L9E6", "url": "https://omabrowser.org/oma/group/I3L9E6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y426-1", "protein_name": "C2 domain-containing protein 2", "gene_name": "C2CD2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAMARLGSWLGEAQWLALVSLFVAALATVGLYLAQWALARARPQPQRRAVEPGEGPRPGSDALLSWILTLGSWRSQWQAAWVTALNEEAERKGGPPFLSFEEDPRQQALELVVQEVSSVLRSAEEKVVVCHVVGQAIQFLVSETPALGAGCRLYDMRLSPFHLQLEFHMKEKREDLQISWSFISVPEMAVNIQPKALGEDQVAETSAMSDVLKDILKHLAGSASPSVVLITKPTTVKEAQNLQCAASTAQESCPPKPPRAHELKLLVRNIHVLLLSEPGASGHINAVCVVQLNDPVQRFSSTLTKNTPDLMWEEEFTFELNAKSKELHLQISEAGRSSEGLLATATVPLDLFKKQPSGPQSFTLTSGSACGSSVLGSVTAEFSYMEPGELKSWPIPPPVPAAKIEKDRTVMPCGTVVTTVTAVKTKPRVDVGRASPLSSDSPVKTPIKVKVIEKDISVQAIACRSAPVSKTLSSSDTELLVLNGSDPVAEVAIRQLSESSKLKLKSPRKKSTIIISGISKTSLSQDHDAALMQGYTASVDSTHQEDAPSHPERAAASAPPEEAESAQASLAPKPQEDELDSWDLEKEPQAAAWSSQVLLDPDGDELSESSMSVLEPGTAKKHKGGILRKGAKLFFRRRHQQKDPGMSQSHNDLVFLEQPEGSRRKGITLTRILNKKLLSRHRNKNTMNGAPVEPCT", "length": 696 }, "evidence": [ { "id": "I3L9E6", "url": "https://omabrowser.org/oma/group/I3L9E6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 482, "end_pos": 484, "annotation": "n_glycosylation_sequon" }, { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L9E6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9E6" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 244, "end_pos": 361, "start_aa": "Arg", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 482, "end_pos": 484 }, { "start_pos": 95, "end_pos": 97 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SN72-1", "uniprot_ac": "F1SN72", "uniprot_id": "F1SN72_PIG", "mass": { "chemical_mass": 104646.0, "monoisotopic_mass": 104646.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF618", "type": "recommended", "evidence": [ { "id": "F1SN72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN72" } ] } ], "protein_names": [ { "name": "Zinc finger protein 618", "type": "recommended", "evidence": [ { "id": "F1SN72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN72/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Regulates UHRF2 function as a specific 5-hydroxymethylcytosine (5hmC) reader by regulating its chromatin localization.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QVM2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVM2#function" }, { "database": "UniProtKB", "id": "ARBA00054031", "url": "https://www.uniprot.org/uniprotkb/ARBA00054031#function" }, { "database": "UniProtKB", "id": "A0A5G2R5N3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5N3#function" }, { "database": "UniProtKB", "id": "F1SN72", "url": "https://www.uniprot.org/uniprotkb/F1SN72#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SN72", "url": "https://www.uniprot.org/uniprotkb/F1SN72" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF618", "url": "https://www.uniprot.org/uniprotkb/F1SN72", "locus": { "chromosome": "1", "start_pos": 254672964, "end_pos": 254477872, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005484", "url": "https://www.ensembl.org/id/ENSSSCG00000005484" } ] } } ], "crossref": [ { "id": "F1SN72", "url": "https://alphafold.ebi.ac.uk/entry/F1SN72", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005484", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005484", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR012337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018473", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018473", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24383", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24383", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24383:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24383:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10683", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10683", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QVM2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVM2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVM2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVM2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5N3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5N3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5N3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5N3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN72", "url": "https://www.uniprot.org/uniprotkb/F1SN72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN72-1", "url": "https://www.uniprot.org/uniprotkb/F1SN72-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNQPGGAAAPQADGASAAGRKSTASRERLKRSQKSAKVEGPEPAPAEASLSAEQGTMTEVKVKTELPDDYIQEVIWQGEAKEEKKAVGKDGPGDVPAEICVVIGGVRNQQTLDGKAPEGSPHGGSGRSRYSGTWIFDQALRYASGSYECGICGKKYKYYNCFQTHVRAHRDTEATSGEGASQGNNFRYTCDICGKKYKYYSCFQEHRDLHAVDVFSVEGAPENRADPFDQGVVATDEVKEEPPEPFQKIGPKTGNYTCEFCGKQYKYYTPYQEHVALHAPISTAPGWEPPDDPDTGSECSHPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSPASKATAAESAFSRRVEGKAQNHFEETNSSSQNSSEPYTCGACGIQFQFYNNLLEHMQSHAADNENNIASNQSRSPPAVVEEKWKPQAQRNSANNTTTSGLTPNSMIPEKERQNIAERLLRVMCADLGALSVVSGKEFLKLAQTLVDSGARYGFSVTEILGNFNTLALKHLPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTAYQAEGNHIKSYVLGVKGADIRDSGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVSASAFSKAGMCLRCSACALNSVVQSVLSKRTLQARSMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPPPCWNSVTDSLLLVHERYEQICEFYSRAKKMNLIQSLNKHLLSNLAAILTPVKQAVIELSNESQPTLQLVLPTYVRLEKLFTAKANDAGTVSKLCHLFLEALKENFKVHPAHKVAMILDPQQKLRPVPPYQHEEIIGKVCELINEVKESWTEEADFEPAAKKPRSAPGDNPAAQDDDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVNMCEQALLIKRRRLLSPEDMNKLMFLKSNML", "length": 953, "header": "tr|F1SN72-1|F1SN72_PIG Isoform 1 of Zinc finger protein 618 OS=Sus scrofa OX=9823 GN=ZNF618 PE=3 SV=4 CANONICAL=F1SN72-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QVM2-1", "url": "https://www.uniprot.org/uniprotkb/F1SN72/entry#A0A5G2QVM2-1", "sequence": { "sequence": "MNQPGGAAAPQADGASAAGRKSTASRERLKRSQKSAKVEGPEPAPAEASLSAEQGTMTEVKVKTELPDDYIQEVIWQGEAKEEKKAVGKDGPGDVPAEICVVIGGVRNQQTLGSYECGICGKKYKYYNCFQTHVRAHRDTEATSGEGASQGNNFRYTCDICGKKYKYYSCFQEHRDLHAVDVFSVEGAPENRADPFDQGVVATDEVKEEPPEPFQKIGPKTGNYTCEFCGKQYKYYTPYQEHVALHAPISTAPGWEPPDDPDTGSECSHPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSPASKATAESAFSRRVEGKAQNHFEETNSSSQNSSEPYTCGACGIQFQFYNNLLEHMQSHAADNENNIASNQSRSPPAVVEEKWKPQAQRNSANNTTTSGLTPNSMIPEKERQNIAERLLRVMCADLGALSVVSGKEFLKLAQTLVDSGARYGFSVTEILGNFNTLALKHLPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTAYQAEGNHIKSYVLGVKGADIRDSGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVSASAFSKAGMCLRCSACALNSVVQSVLSKRTLQARSMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPPPCWNSVTDSLLLVHERYEQICEFYSRAKKMNLIQSLNKHLLSNLAAILTPVKQAVIELSNESQPTLQLVLPTYVRLEKLFTAKANDAGTVSKLCHLFLEALKENFKVHPAHKVAMILDPQQKLRPVPPYQHEEIIGKVCELINEVKESWTEEADFEPAAKKPRSAPGDNPAAQDDDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVNMCEQALLIKRRRLLSPEDMNKLMFLKSNML", "length": 920, "header": "tr|A0A5G2QVM2-1|F1SN72_PIG Computationally mapped isoform of Zinc finger protein 618 OS=Sus scrofa OX=9823 GN=ZNF618 PE=3 SV=1 CANONICAL=F1SN72-1" }, "locus": { "chromosome": "1", "start_pos": 254672961, "end_pos": 254477962, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068251.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068251.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065983.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065983.1" } ] } }, { "isoform_ac": "A0A5G2R5N3-1", "url": "https://www.uniprot.org/uniprotkb/F1SN72/entry#A0A5G2R5N3-1", "sequence": { "sequence": 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"MNQPGGAAAPQADGASAAGRKSTASRERLKRSQKSAKVEGPEPAPAEASLSAEQGTMTEVKVKTELPDDYIQEVIWQGEAKEEKKAVGKDGPGDVPAEICVVIGGVRNQQTLDGKAPEGSPHGGSGRSRYSGTWIFDQALRYASGSYECGICGKKYKYYNCFQTHVRAHRDTEATSGEGASQGNNFRYTCDICGKKYKYYSCFQEHRDLHAVDVFSVEGAPENRADPFDQGVVATDEVKEEPPEPFQKIGPKTGNYTCEFCGKQYKYYTPYQEHVALHAPISTAPGWEPPDDPDTGSECSHPEVSPSPRFVAAKTQTNQSGKKAPASVVRCATLLHRTPPATQTQTFRTPNSGSPASKATAAESAFSRRVEGKAQNHFEETNSSSQNSSEPYTCGACGIQFQFYNNLLEHMQSHAADNENNIASNQSRSPPAVVEEKWKPQAQRNSANNTTTSGLTPNSMIPEKERQNIAERLLRVMCADLGALSVVSGKEFLKLAQTLVDSGARYGFSVTEILGNFNTLALKHLPRMYNQVKVKVTCALGSNACLGIGVTCHSQSVGPDSCYILTAYQAEGNHIKSYVLGVKGADIRDSGDLVHHWVQNVLSEFVMSEIRTVYVTDCRVSASAFSKAGMCLRCSACALNSVVQSVLSKRTLQARSMHEVIELLNVCEDLAGSTGLAKETFGSLEETSPPPCWNSVTDSLLLVHERYEQICEFYSRAKKMNLIQSLNKHLLSNLAAILTPVKQAVIELSNESQPTLQLVLPTYVRLEKLFTAKANDAGTVSKLCHLFLEALKENFKVHPAHKVAMILDPQQKLRPVPPYQHEEIIGKVCELINEVKESWTEEADFEPAAKKPRSAPGDNPAAQDDDRLGKNEVYDYLQEPLFQATPDLFQYWSCVTQKHTKLAKLAFWLLAVPAVGARSGCVNMCEQALLIKRRRLLSPEDMNKLMFLKSNML", "length": 953, "header": 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"Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-937072", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-937072", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9645460", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9645460", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-975163", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-975163", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001230996", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230996", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QVY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVY8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVY8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVY8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0S4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0S4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0S4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0S4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8H0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R8H0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R8H0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEQ9", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEQ9-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEQ9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNY4-1", "url": "https://www.uniprot.org/uniprotkb/F1SNY4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GLB8", "url": "https://www.uniprot.org/uniprotkb/K7GLB8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GLB8-1", "url": "https://www.uniprot.org/uniprotkb/K7GLB8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLSAEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREVSGGAMAVVAVLLSNRLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKLKQVGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGELSQPTPAPAPAAGGRVYPVSVPYSSTQSTSKTSVTLSLVMPSQGQLVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPTHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVATAP", "length": 504, "header": "tr|F1SNY4-1|F1SNY4_PIG Isoform 1 of TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Sus scrofa OX=9823 GN=TAB1 PE=1 SV=3 CANONICAL=F1SNY4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QVY8-1", "url": "https://www.uniprot.org/uniprotkb/F1SNY4/entry#A0A5G2QVY8-1", "sequence": { "sequence": "MNSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLSAEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREVSGGAMAVVAVLLSNRLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKLKQVGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGELSQPTPAPAPAAGGRVYPVSVPYSSTQGQLVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPTHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVATAP", "length": 480, "header": "tr|A0A5G2QVY8-1|F1SNY4_PIG Computationally mapped isoform of TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Sus scrofa OX=9823 GN=TAB1 PE=1 SV=1 CANONICAL=F1SNY4-1" }, "locus": { "chromosome": "5", "start_pos": 8851697, "end_pos": 8829480, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087726.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087726.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066093.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066093.1" } ] } }, { "isoform_ac": "A0A5G2R0S4-1", "url": "https://www.uniprot.org/uniprotkb/F1SNY4/entry#A0A5G2R0S4-1", "sequence": { "sequence": "MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLSAEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREVSGGAMAVVAVLLSNRLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKLKQVGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGELSQPTPAPAPAAGGRVYPVSVPYSSTQSTSKTSVTLSLVMPSQGQLVNGAHSASTLDEATPTLTKGLSKNVRGDLRAIPRCYFKLLDILPLLVQ", "length": 465, "header": "tr|A0A5G2R0S4-1|F1SNY4_PIG Computationally mapped isoform of TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Sus scrofa OX=9823 GN=TAB1 PE=1 SV=1 CANONICAL=F1SNY4-1" }, "locus": { "chromosome": "5", "start_pos": 8852720, "end_pos": 8826840, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076376.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076376.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067811.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067811.1" } ] } }, { "isoform_ac": "A0A5G2R8H0-1", "url": "https://www.uniprot.org/uniprotkb/F1SNY4/entry#A0A5G2R8H0-1", "sequence": { "sequence": "MGSQRRVYTRSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLSAEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREVSGGAMAVVAVLLSNRLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKLKQVGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGELSQPTPAPAPAAGGRVYPVSVPYSSTQSTSKTSVTLSLVMPSQGQLVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPTHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVATAP", "length": 504, "header": "tr|A0A5G2R8H0-1|A0A5G2R8H0_PIG Computationally mapped isoform of TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Sus scrofa OX=9823 GN=TAB1 PE=1 SV=1 CANONICAL=F1SNY4-1" }, "locus": { "chromosome": "5", "start_pos": 8841221, "end_pos": 8829480, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083883.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083883.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066908.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066908.1" } ] } }, { "isoform_ac": "A0A8W4FEQ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SNY4/entry#A0A8W4FEQ9-1", "sequence": { "sequence": "MNSLWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLSAEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREVSGGAMAVVAVLLSNRLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKLKQVGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGELSQPTPAPAPAAGGRVYPVSVPYSSTQSTSKTSGQLVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPTHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVATAP", "length": 482, "header": "tr|A0A8W4FEQ9-1|A0A8W4FEQ9_PIG Computationally mapped isoform of TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Sus scrofa OX=9823 GN=TAB1 PE=1 SV=2 CANONICAL=F1SNY4-1" }, "locus": { "chromosome": "5", "start_pos": 8841696, "end_pos": 8829480, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097715.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097715.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077744.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077744.1" } ] } }, { "isoform_ac": "F1SNY4-1", "url": "https://www.uniprot.org/uniprotkb/F1SNY4/entry#F1SNY4-1", "sequence": { "sequence": "MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLSAEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREVSGGAMAVVAVLLSNRLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKLKQVGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGELSQPTPAPAPAAGGRVYPVSVPYSSTQSTSKTSVTLSLVMPSQGQLVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPTHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVATAP", "length": 504, "header": "tr|F1SNY4-1|F1SNY4_PIG Isoform 1 of TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Sus scrofa OX=9823 GN=TAB1 PE=1 SV=3 CANONICAL=F1SNY4-1" }, "locus": { "chromosome": "5", "start_pos": 8852720, "end_pos": 8829480, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000093.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000093.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000091.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000091.3" } ] } }, { "isoform_ac": "K7GLB8-1", "url": "https://www.uniprot.org/uniprotkb/F1SNY4/entry#K7GLB8-1", "sequence": { "sequence": "MGSQRRVYTRSVSLTRAPRWSAHLETQLSLAFGDSGRFQVSWGRVCRVAMEPCKPFCKCLFIPPPCHLPGGSGTLRVVLGACRVWVGEEDAEVGSALGQTVMHWGFLVSLQEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLSAEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREVSGGAMAVVAVLLSNRLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKLKQVGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGELSQPTPAPAPAAGGRVYPVSVPYSSTQSTSKTSVTLSLVMPSQGQLVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPTHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVATAP", "length": 604, "header": "tr|K7GLB8-1|K7GLB8_PIG Computationally mapped isoform of TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 OS=Sus scrofa OX=9823 GN=TAB1 PE=1 SV=2 CANONICAL=F1SNY4-1" }, "locus": { "chromosome": "5", "start_pos": 8841221, "end_pos": 8829480, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000035948.4", "url": "https://www.ensembl.org/id/ENSSSCT00000035948.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028647.2", "url": "https://www.ensembl.org/id/ENSSSCP00000028647.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 376, "start_aa": "Thr", "end_pos": 376, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr376", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QVY8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVY8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153785", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153785", "resource": "KEGG Pathway" }, { "id": "R-SSC-168638", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-168638", "resource": "Reactome", "description": "NOD1/2 Signaling Pathway" }, { "id": "R-SSC-2871837", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2871837", "resource": "Reactome", "description": "FCERI mediated NF-kB activation" }, { "id": "R-SSC-445989", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-445989", "resource": "Reactome", "description": "TAK1-dependent IKK and NF-kappa-B activation" }, { "id": "R-SSC-450302", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-450302", "resource": "Reactome", "description": "activated TAK1 mediates p38 MAPK activation" }, { "id": "R-SSC-450321", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-450321", "resource": "Reactome", "description": "JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1" }, { "id": "R-SSC-5357956", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5357956", "resource": "Reactome", "description": "TNFR1-induced NF-kappa-B signaling pathway" }, { "id": "R-SSC-5607764", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5607764", "resource": "Reactome", "description": "CLEC7A (Dectin-1) signaling" }, { "id": "R-SSC-5689880", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689880", "resource": "Reactome", "description": "Ub-specific processing proteases" }, { "id": "R-SSC-9020702", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9020702", "resource": "Reactome", "description": "Interleukin-1 signaling" }, { "id": "R-SSC-937042", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-937042", "resource": "Reactome", "description": "IRAK2 mediated activation of TAK1 complex" }, { "id": "R-SSC-937072", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-937072", "resource": "Reactome", "description": "TRAF6-mediated induction of TAK1 complex within TLR4 complex" }, { "id": "R-SSC-9645460", "name": "", "url": 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"MGGGKNRACARLLCCASSPPGALWIISGSVEAALAIHFATPRDWRAAGSSKMAAQRRSLLQSEQQPSWTDDLPLCHFSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNTEHTDADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLLPQYQKILERLKALEKEISGGAMAVVAVLLNNKLYVANVGTNRALLCRSTVDGLQVTQLNVDHTAENEDELFRLSQLGLDAGKIKQVGVICGQESTRRIGDYKVKYGYTDIDLLSTAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEVAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGEMSQPTPTPAPGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQMVNGSHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVMTAP", "length": 553 }, "evidence": [ { "id": "F1SNY4", "url": "https://omabrowser.org/oma/group/F1SNY4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F6QID7-1", "protein_name": "TGF-beta-activated kinase 1 and MAP3K7-binding protein 1", "gene_name": "TAB1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNTEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKALEKEISGGAMAVVAVLLNNRLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGVICGQESTRRIGDYKVKYGYTDVDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGEMSQSAPSPAPASGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQLVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVVTAP", "length": 504 }, "evidence": [ { "id": "F1SNY4", "url": "https://omabrowser.org/oma/group/F1SNY4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q15750-1", "protein_name": "TGF-beta-activated kinase 1 and MAP3K7-binding protein 1", "gene_name": "TAB1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPLGEMSQPTPSPAPAAGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQMVNGAHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVVTAP", "length": 504 }, "evidence": [ { "id": "F1SNY4", "url": "https://omabrowser.org/oma/group/F1SNY4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CF89-1", "protein_name": "TGF-beta-activated kinase 1 and MAP3K7-binding protein 1", "gene_name": "Tab1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAQRRSLLQSEQQPSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDNWLKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNTEHTEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKALEREISGGAMAVVAVLLNSKLYVANVGTNRALLCKSTVDGLQVTQLNMDHTTENEDELFRLSQLGLDAGKIKQMGVICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERAKFCPRHEDMTLLVRNFGYPLGEMSQPTPTPAPGGRVYPVSVPYSSAQSTSKTSVTLSLVMPSQGQMVNGSHSASTLDEATPTLTNQSPTLTLQSTNTHTQSSSSSSDGGLFRSRPAHSLPPGEDGRVEPYVDFAEFYRLWSVDHGEQSVMTAP", "length": 502 }, "evidence": [ { "id": "F1SNY4", "url": "https://omabrowser.org/oma/group/F1SNY4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "kinase activator activity", "id": "GO:0019209", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019209", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "protein serine/threonine phosphatase activity", "id": "GO:0004722", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004722", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "kinase activity", "id": "GO:0016301", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016301", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "protein serine/threonine kinase activator activity", "id": "GO:0043539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043539", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "positive regulation of intracellular signal transduction", "id": "GO:1902533", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902533", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "canonical NF-kappaB signal transduction", "id": "GO:0007249", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007249", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "non-canonical NF-kappaB signal transduction", "id": "GO:0038061", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038061", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "regulation of MAPK cascade", "id": "GO:0043408", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043408", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" }, { "name": "positive regulation of cGAS/STING signaling pathway", "id": "GO:0141111", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0141111", "evidence": [ { "database": "UniProtKB", "id": "F1SNY4", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 34, "end_pos": 36, "annotation": "n_glycosylation_sequon" }, { "start_pos": 436, "end_pos": 438, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SNY4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNY4" }, { "id": "PS51746", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51746" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PPM-type phosphatase", "eco_id": "ECO_0000259", "start_pos": 28, "end_pos": 365, "start_aa": "Gly", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 376 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 34, "end_pos": 36 }, { "start_pos": 436, "end_pos": 438 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8J2-1", "uniprot_ac": "I3L8J2", "uniprot_id": "I3L8J2_PIG", "mass": { "chemical_mass": 18956.0, "monoisotopic_mass": 18956.0 }, "refseq": { "ac": "XP_003481250", "name": "galectin-related protein isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481250" }, "gene_names": [ { "name": "LGALSL", "type": "recommended", "evidence": [ { "id": "I3L8J2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8J2" } ] }, { "name": "LGALSL", "type": "synonym", "evidence": [ { "id": "XP_003481250", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481250" } ] } ], "protein_names": [ { "name": "Galectin", "type": "recommended", "evidence": [ { "id": "I3L8J2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8J2/entry#names_and_taxonomy" } ] }, { "name": "galectin-related protein isoform X2", "type": "synonym", "evidence": [ { "id": "XP_003481250", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481250" } ] } ], "function": [ { "annotation": "Does not bind lactose, and may not bind carbohydrates.", "evidence": [ { "database": "UniProtKB", "id": "I3L8J2", "url": "https://www.uniprot.org/uniprotkb/I3L8J2#function" }, { "database": "UniProtKB", "id": "ARBA00003397", "url": "https://www.uniprot.org/uniprotkb/ARBA00003397#function" }, { "database": "UniProtKB", "id": "A0A8D0V1W3", "url": "https://www.uniprot.org/uniprotkb/A0A8D0V1W3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8J2", "url": "https://www.uniprot.org/uniprotkb/I3L8J2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LGALSL", "url": "https://www.uniprot.org/uniprotkb/I3L8J2", "locus": { "chromosome": "3", "start_pos": 77472166, "end_pos": 77479361, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030005", "url": "https://www.ensembl.org/id/ENSSSCG00000030005" } ] } } ], "crossref": [ { "id": "I3L8J2", "url": "https://alphafold.ebi.ac.uk/entry/I3L8J2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030005", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030005", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00070", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00070", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100270690", "url": "https://www.ncbi.nlm.nih.gov/gene/100270690", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001079", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001079", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044156", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044156", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100270690", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100270690", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CISGEKG", "url": "https://omabrowser.org/oma/group/CISGEKG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A8D0V1W3", "url": "https://www.orthodb.org/?gene=A0A8D0V1W3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3L8J2", "url": "https://www.orthodb.org/?gene=I3L8J2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11346", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11346", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11346:SF98", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11346:SF98", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00337", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00337", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003481250", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481250", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QW65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QW65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QW65-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QW65-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0V1W3", "url": "https://www.uniprot.org/uniprotkb/A0A8D0V1W3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D0V1W3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D0V1W3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8J2", "url": "https://www.uniprot.org/uniprotkb/I3L8J2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8J2-1", "url": "https://www.uniprot.org/uniprotkb/I3L8J2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAGSVADSDAVVKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG", "length": 172, "header": "tr|I3L8J2-1|I3L8J2_PIG Isoform 1 of Galectin OS=Sus scrofa OX=9823 GN=LGALSL PE=1 SV=1 CANONICAL=I3L8J2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QW65-1", "url": "https://www.uniprot.org/uniprotkb/I3L8J2/entry#A0A5G2QW65-1", "sequence": { "sequence": "MAGSVADSDAVVKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPERWKFFVNTHVSECLWMDTNFLIFTTAFKHYLQSTQ", "length": 100, "header": "tr|A0A5G2QW65-1|I3L8J2_PIG Computationally mapped isoform of Galectin OS=Sus scrofa OX=9823 GN=LGALSL PE=1 SV=1 CANONICAL=I3L8J2-1" }, "locus": { "chromosome": "3", "start_pos": 77478945, "end_pos": 77475210, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075779.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075779.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069194.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069194.1" } ] } }, { "isoform_ac": "A0A8D0V1W3-1", "url": "https://www.uniprot.org/uniprotkb/I3L8J2/entry#A0A8D0V1W3-1", "sequence": { "sequence": "MCGGGPRDRGDRHTPLRRAAAGQKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG", "length": 183, "header": "tr|A0A8D0V1W3-1|A0A8D0V1W3_PIG Computationally mapped isoform of Galectin OS=Sus scrofa OX=9823 GN=LGALSL PE=1 SV=1 CANONICAL=I3L8J2-1" }, "locus": { "chromosome": "3", "start_pos": 77478733, "end_pos": 77475172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086057.1", "url": "https://www.ensembl.org/id/ENSSSCT00000086057.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071794.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071794.1" } ] } }, { "isoform_ac": "I3L8J2-1", "url": "https://www.uniprot.org/uniprotkb/I3L8J2/entry#I3L8J2-1", "sequence": { "sequence": "MAGSVADSDAVVKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG", "length": 172, "header": "tr|I3L8J2-1|I3L8J2_PIG Isoform 1 of Galectin OS=Sus scrofa OX=9823 GN=LGALSL PE=1 SV=1 CANONICAL=I3L8J2-1" }, "locus": { "chromosome": "3", "start_pos": 77478945, "end_pos": 77475172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030136.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030136.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020352.1", "url": "https://www.ensembl.org/id/ENSSSCP00000020352.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QW65", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QW65" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100270690", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100270690", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B4F7A3-1", "protein_name": "Galectin", "gene_name": "Lgalsl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYSSASLGPSVLLLLQTVKLTFLPLGWNSLKEAIPGLPLLLPPPSQDLAPDPPQQSQDAEGATALPGLQPWSNGRRAGHAEQAAVPGPRPRPVPGPRFPSRALPPLNATPGRRTAALATVIPSPPRPPRRTPPLPLPGLRPRQPGACARAGVCARPARTRARRRVPGARCRNMAGSVADSDAVVKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG", "length": 344 }, "evidence": [ { "id": "I3L8J2", "url": "https://omabrowser.org/oma/group/I3L8J2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q3ZCW2-1", "protein_name": "Galectin-related protein", "gene_name": "LGALSL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAGSVADSDAVVKLDDGHLNNSLSSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG", "length": 172 }, "evidence": [ { "id": "I3L8J2", "url": "https://omabrowser.org/oma/group/I3L8J2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5ZHQ2-1", "protein_name": "Galectin-related protein", "gene_name": "LGALSL", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGTVAERDAPKIEDGHLNNSLGSPVQADVYFPRLIVPFCGHIKGGMRPGKKILVMGIVDLNPESFGISLTCGESEDPPADVAIELKAVFTDRQFIRNSCVAGEWGEEQSSIPYFPFIPDQPFRVEILCEHPRFRIFVDGHQLFDFYHRIETLSAIDTIKINGDLQLTKLG", "length": 171 }, "evidence": [ { "id": "I3L8J2", "url": "https://omabrowser.org/oma/group/I3L8J2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8VED9-1", "protein_name": "Galectin-related protein", "gene_name": "Lgalsl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAGSVADSDAVVKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG", "length": 172 }, "evidence": [ { "id": "I3L8J2", "url": "https://omabrowser.org/oma/group/I3L8J2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "I3L8J2", "url": "https://www.uniprot.org/uniprotkb/I3L8J2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 20, "end_pos": 22, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L8J2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 172, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L8J2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L8J2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L8J2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8J2" }, { "id": "PS51304", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51304" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Galectin", "eco_id": "ECO_0000259", "start_pos": 40, "end_pos": 172, "start_aa": "Phe", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 20, "end_pos": 22 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L7Q5-1", "uniprot_ac": "I3L7Q5", "uniprot_id": "I3L7Q5_PIG", "mass": { "chemical_mass": 92125.0, "monoisotopic_mass": 92125.0 }, "refseq": { "ac": "XP_013850160", "name": "EVI5-like protein isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013850160" }, "gene_names": [ { "name": "EVI5L", "type": "recommended", "evidence": [ { "id": "I3L7Q5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5" } ] }, { "name": "EVI5L", "type": "synonym", "evidence": [ { "id": "XP_013850160", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013850160" } ] } ], "protein_names": [ { "name": "EVI5-like protein isoform X4", "type": "synonym", "evidence": [ { "id": "XP_013850160", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013850160" } ] }, { "name": "Ecotropic viral integration site 5 like", "type": "synonym", "evidence": [ { "id": "I3L7Q5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L7Q5", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EVI5L", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5", "locus": { "chromosome": "2", "start_pos": 71332650, "end_pos": 71365836, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013585", "url": "https://www.ensembl.org/id/ENSSSCG00000013585" } ] } } ], "crossref": [ { "id": "I3L7Q5", "url": "https://alphafold.ebi.ac.uk/entry/I3L7Q5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013585", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013585", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100519944", "url": "https://www.ncbi.nlm.nih.gov/gene/100519944", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050302", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050302", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519944", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519944", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2R7P1", "url": "https://www.orthodb.org/?gene=A0A5G2R7P1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3L7Q5", "url": "https://www.orthodb.org/?gene=I3L7Q5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47219", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47219", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47219:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47219:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00566", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00566", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27580", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27580", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013850160", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013850160", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R072", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R072", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R072-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R072-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7P1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7P1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7P1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7P1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA82", "url": "https://www.uniprot.org/uniprotkb/F1SA82", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA82-1", "url": "https://www.uniprot.org/uniprotkb/F1SA82-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7Q5", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7Q5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLPTMASPTLSPDSSSQEALSAPTCSPTSDSENLSPDELELLAKLEEQNRLLEADSKSMRSMNGSRRNSGSSLVSSSSASSNLSHLEEDTWILWGRIANEWEEWRRRKEKLLKELIRKGIPHHFRAIVWQLLCSATDMPVKNQYSELLKMSSPCEKLIRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLLLMQMPEEEAFCVFVRLMQEYRLRELFKPSMAELGLCIYQFEYMLQEQLPDLNTHFRSQSFHTSMYASSWFLTLFLTTFPLPVATRVFDIFMYEGLEIVFRVGLALLQVNQTELMQLDMEGMSQYFQRVIPHQFDSCPDKLILKAYQVKYNPKKMKRLEKEYAAMKSKEMEEQIEIKRLRTENRLLKQRIETLEKGQVTRAQEAEENYVIKRELAVVRQQCSSAAEDLQKAQSTIRQLQEQQDNPRLTEDFVAHLETELEQSRLRETETLGALREMQDKVLDMEKRNSSLPDENNVARLQEELKALKVREGEAVASARELKLQLQELSDTWQAHLSRGGRWKESPRKLVLGELQDELMSVRLREAQALAEGRELRQRVVELETQDHIHRNLLNRVEAERAALQEKLQYLAAQNKGLQTQLSESRRKQAEAECKSKEEVMAVRLREADSMAAVAEMRQRIAELEIQREEGRIQGQLNHSDSSQYIRELKDQIEELKAEVRLLKGPPSFEDPLAFDGLSLARHLDEDSLPSSDEELLGVGVGVGAALQDALYPLSPRDARFFRRLERPAKDSEGSSDSDADELTAPYSQGLDN", "length": 801, "header": "tr|I3L7Q5-1|I3L7Q5_PIG Isoform 1 of Ecotropic viral integration site 5 like OS=Sus scrofa OX=9823 GN=EVI5L PE=1 SV=3 CANONICAL=I3L7Q5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R072-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5/entry#A0A5G2R072-1", "sequence": { "sequence": "MFPGEQQALWSRAGGTGCANSDHTCLWPPDRAVTWSCLRLMSLPTMASPTLSPDSSSQEALSAPTCSPTSDSENLSPDELELLAKLEEQNRLLEADSKSMRSMNGSRRNSGSSLVSSSSASSNLSHLEEDTWILWGRIANEWEEWRRRKEKLLKELIRKGIPHHFRAIVWQLLCSATDMPVKNQYSELLKMSSPCEKLIRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLLLMQMPEEEAFCVFVRLMQEYRLRELFKPSMAELGLCIYQFEYMLQEQLPDLNTHFRSQSFHTSMYASSWFLTLFLTTFPLPVATRVFDIFMYEGLEIVFRVGLALLQVNQTELMQLDMEGMSQYFQRVIPHQFDSCPDKLILKAYQVKYNPKKMKRLEKEYAAMKSKEMEEQIEIKRLRTENRLLKQRIETLEKRVTVPCPRCAQGQVTRAQEAEENYVIKRELAVVRQQCSSAAEDLQKAQSTIRQLQEQQDNPRLTEDFVAHLETELEQSRLRETETLGALREMQDKVLDMEKRNSSLPDENNVARLQEELKALKVREGEAVASARELKLQLQELSDTWQAHLSRGGRWKESPRKLVLGELQDELMSVRLREAQALAEGRELRQRVVELETQDHIHRNLLNRVEAERAALQEKLQYLAAQNKGLQTQLSESRRKQAEAECKVPATREGHKSPGYVGPRLQRAGPPPQVRLLKGPPSFEDPLAFDGLSLARHLDEDSLPSSDEELLGVGVGVGAALQDALYPLSPRDARFFRRLERPAKDSEGSSDSDADELTAPYSQGLDN", "length": 814, "header": "tr|A0A5G2R072-1|I3L7Q5_PIG Computationally mapped isoform of Ecotropic viral integration site 5 like OS=Sus scrofa OX=9823 GN=EVI5L PE=1 SV=1 CANONICAL=I3L7Q5-1" }, "locus": { "chromosome": "2", "start_pos": 71353216, "end_pos": 71333831, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000069892.2", "url": "https://www.ensembl.org/id/ENSSSCT00000069892.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070549.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070549.1" } ] } }, { "isoform_ac": "A0A5G2R7P1-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5/entry#A0A5G2R7P1-1", "sequence": { "sequence": 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CANONICAL=I3L7Q5-1" }, "locus": { "chromosome": "2", "start_pos": 71353096, "end_pos": 71333831, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073557.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073557.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073272.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073272.2" } ] } }, { "isoform_ac": "F1SA82-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5/entry#F1SA82-1", "sequence": { "sequence": "MSLLWWQKVAGDLQGRKLFLRAVTWSCLRLMSLPTMASPTLSPDSSSQEALSAPTCSPTSDSENLSPDELELLAKLEEQNRLLEADSKSMRSMNGSRRNSGSSLVSSSSASSNLSHLEEDTWILWGRIANEWEEWRRRKEKLLKELIRKGIPHHFRAIVWQLLCSATDMPVKNQYSELLKMSSPCEKLIRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLLLMQMPEEEAFCVFVRLMQEYRLRELFKPSMAELGLCIYQFEYMLQEQLPDLNTHFRSQSFHTSMYASSWFLTLFLTTFPLPVATRVFDIFMYEGLEIVFRVGLALLQVNQTELMQLDMEGMSQYFQRVIPHQFDSCPDKLILKAYQVKYNPKKMKRLEKEYAAMKSKEMEEQIEIKRLRTENRLLKQRIETLEKGQVTRAQEAEENYVIKRELAVVRQQCSSAAEDLQKAQSTIRQLQEQQDNPRLTEDFVAHLETELEQSRLRETETLGALREMQDKVLDMEKRNSSLPDENNVARLQEELKALKVREGEAVASARELKLQLQELSDTWQAHLSRGGRWKESPRKLVLGELQDELMSVRLREAQALAEGRELRQRVVELETQDHIHRNLLNRVEAERAALQEKLQYLAAQNKGLQTQLSESRRKQAEAECKSKEEVMAVRLREADSMAAVAEMRQRIAELEIQREEGRIQGQLNHSDSSQYIRELKDQIEELKAEVRLLKGPPSFEDPLAFDGLSLARHLDEDSLPSSDEELLGVGVGVGAALQDALYPLSPRDARFFRRLERPAKDSEGSSDSDADELTAPYSQGLDN", "length": 831, "header": "tr|F1SA82-1|I3L7Q5_PIG Computationally mapped isoform of Ecotropic viral integration site 5 like OS=Sus scrofa OX=9823 GN=EVI5L PE=1 SV=3 CANONICAL=I3L7Q5-1" }, "locus": { "chromosome": "2", "start_pos": 71360943, "end_pos": 71333831, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014837.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014837.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014436.4", "url": "https://www.ensembl.org/id/ENSSSCP00000014436.4" } ] } }, { "isoform_ac": "I3L7Q5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5/entry#I3L7Q5-1", "sequence": { "sequence": "MSLPTMASPTLSPDSSSQEALSAPTCSPTSDSENLSPDELELLAKLEEQNRLLEADSKSMRSMNGSRRNSGSSLVSSSSASSNLSHLEEDTWILWGRIANEWEEWRRRKEKLLKELIRKGIPHHFRAIVWQLLCSATDMPVKNQYSELLKMSSPCEKLIRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQGSAFIVGLLLMQMPEEEAFCVFVRLMQEYRLRELFKPSMAELGLCIYQFEYMLQEQLPDLNTHFRSQSFHTSMYASSWFLTLFLTTFPLPVATRVFDIFMYEGLEIVFRVGLALLQVNQTELMQLDMEGMSQYFQRVIPHQFDSCPDKLILKAYQVKYNPKKMKRLEKEYAAMKSKEMEEQIEIKRLRTENRLLKQRIETLEKGQVTRAQEAEENYVIKRELAVVRQQCSSAAEDLQKAQSTIRQLQEQQDNPRLTEDFVAHLETELEQSRLRETETLGALREMQDKVLDMEKRNSSLPDENNVARLQEELKALKVREGEAVASARELKLQLQELSDTWQAHLSRGGRWKESPRKLVLGELQDELMSVRLREAQALAEGRELRQRVVELETQDHIHRNLLNRVEAERAALQEKLQYLAAQNKGLQTQLSESRRKQAEAECKSKEEVMAVRLREADSMAAVAEMRQRIAELEIQREEGRIQGQLNHSDSSQYIRELKDQIEELKAEVRLLKGPPSFEDPLAFDGLSLARHLDEDSLPSSDEELLGVGVGVGAALQDALYPLSPRDARFFRRLERPAKDSEGSSDSDADELTAPYSQGLDN", "length": 801, "header": "tr|I3L7Q5-1|I3L7Q5_PIG Isoform 1 of Ecotropic viral integration site 5 like OS=Sus scrofa OX=9823 GN=EVI5L PE=1 SV=3 CANONICAL=I3L7Q5-1" }, "locus": { "chromosome": "2", "start_pos": 71353096, "end_pos": 71333831, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025675.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025675.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020061.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020061.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R072", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R072" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519944", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519944", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "I3L7Q5", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5" } ], "pmid": "" }, { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "I3L7Q5", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of cilium assembly", "id": "GO:1902018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902018", "evidence": [ { "database": "UniProtKB", "id": "I3L7Q5", "url": "https://www.uniprot.org/uniprotkb/I3L7Q5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 320, "end_pos": 322, "annotation": "n_glycosylation_sequon" }, { "start_pos": 34, "end_pos": 36, "annotation": "n_glycosylation_sequon" }, { "start_pos": 497, "end_pos": 499, "annotation": "n_glycosylation_sequon" }, { "start_pos": 64, "end_pos": 66, "annotation": "n_glycosylation_sequon" }, { "start_pos": 686, "end_pos": 688, "annotation": "n_glycosylation_sequon" }, { "start_pos": 83, "end_pos": 85, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036812", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036812", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050523", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050523", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511331", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511331", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TAPNYWH", "url": "https://omabrowser.org/oma/group/TAPNYWH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SUP1", "url": "https://www.orthodb.org/?gene=F1SUP1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43364", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43364", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43364:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43364:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00248", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00248", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5423646", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5423646", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001230751", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230751", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R0M9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0M9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R0M9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0M9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUP1", "url": "https://www.uniprot.org/uniprotkb/F1SUP1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUP1-1", "url": "https://www.uniprot.org/uniprotkb/F1SUP1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLNAVSRAVARAAVRSSRRPRQSEARPAASAAVMSRPLRATSGSPARPATVLGTMEMGRRMDAPASAAAVRAFLQRGYTELDTAFMYSDGQSESILGGLGLGLGGGDCRVKIATKANPWEGRSLKPDSLRSQLETSLQRLQCPRVDLFYLHAPDHGTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCRSNGWILPTVYQGMYNATTRQVETELFPCLKHFGLRFYAYNPLAGGLLTGKYKYEDKDEKQPLGRFFGNSWAEIYRNRFWKEHHFKAIALVEKALQAAYGTSAPSMTSAALRWMYHHSQLQGDHGDAVILGMSSLEQLEQNLAATEGGPLEPTVVQAFDQAWHMVAHECPNYFR", "length": 369, "header": "tr|F1SUP1-1|F1SUP1_PIG Isoform 1 of Aldo-keto reductase family 7 member A2 OS=Sus scrofa OX=9823 GN=AKR7A2 PE=1 SV=2 CANONICAL=F1SUP1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R0M9-1", "url": "https://www.uniprot.org/uniprotkb/F1SUP1/entry#A0A5G2R0M9-1", "sequence": { "sequence": "MLNAVSRAVARAAVRSSRRPRQSEARPAASAAVMSRPLRATSGSPARPATVLGTMEMGRRMDAPASAAAVRAFLQRGYTELDTAFMYSDGQSESILGGLGLGLGGGDCRVKIATKANPWEGRSLKPDSLRSQLETSLQRLQCPRVDLFYLHAPDHGTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCRSNGWILPTVYQGMYNATTRQVETELFPCLKHFGLRFYAYNPLAGGLLTGKYKYEDKDEKQPLGRFFGNSWAEIYRNRFWKEHHFKAIALVEKALQAAYGTSAPSMTSAALRWMYHHSQLQVSQLPLEAPLLLSWGNQNDL", "length": 336, "header": "tr|A0A5G2R0M9-1|F1SUP1_PIG Computationally mapped isoform of Aldo-keto reductase family 7 member A2 OS=Sus scrofa OX=9823 GN=AKR7A2 PE=1 SV=1 CANONICAL=F1SUP1-1" }, "locus": { "chromosome": "6", "start_pos": 77761603, "end_pos": 77755860, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072543.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072543.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064066.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064066.1" } ] } }, { "isoform_ac": "F1SUP1-1", "url": "https://www.uniprot.org/uniprotkb/F1SUP1/entry#F1SUP1-1", "sequence": { "sequence": "MLNAVSRAVARAAVRSSRRPRQSEARPAASAAVMSRPLRATSGSPARPATVLGTMEMGRRMDAPASAAAVRAFLQRGYTELDTAFMYSDGQSESILGGLGLGLGGGDCRVKIATKANPWEGRSLKPDSLRSQLETSLQRLQCPRVDLFYLHAPDHGTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCRSNGWILPTVYQGMYNATTRQVETELFPCLKHFGLRFYAYNPLAGGLLTGKYKYEDKDEKQPLGRFFGNSWAEIYRNRFWKEHHFKAIALVEKALQAAYGTSAPSMTSAALRWMYHHSQLQGDHGDAVILGMSSLEQLEQNLAATEGGPLEPTVVQAFDQAWHMVAHECPNYFR", "length": 369, "header": "tr|F1SUP1-1|F1SUP1_PIG Isoform 1 of Aldo-keto reductase family 7 member A2 OS=Sus scrofa OX=9823 GN=AKR7A2 PE=1 SV=2 CANONICAL=F1SUP1-1" }, "locus": { "chromosome": "6", "start_pos": 77761603, "end_pos": 77754458, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003878.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003878.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003790.2", "url": "https://www.ensembl.org/id/ENSSSCP00000003790.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R0M9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R0M9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511331", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511331", "resource": "KEGG Pathway" }, { "id": "R-SSC-5423646", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5423646", "resource": "Reactome", "description": "Aflatoxin activation and detoxification" } ], "orthologs": [ { "uniprot_canonical_ac": "O43488-1", "protein_name": "Aflatoxin B1 aldehyde reductase member 2", "gene_name": "AKR7A2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLSAASRVVSRAAVHCALRSPPPEARALAMSRPPPPRVASVLGTMEMGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPWDGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNSWAETYRNRFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAATEEGPLEPAVVDAFNQAWHLVAHECPNYFR", "length": 359 }, "evidence": [ { "id": "F1SUP1", "url": "https://omabrowser.org/oma/group/F1SUP1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CG45-1", "protein_name": "Aflatoxin B1 aldehyde reductase member 2", "gene_name": "Akr7a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRAVSRAVSRAAVRCAWRSGPSVARPLAMSRSPAPRAVSGAPLRPGTVLGTMEMGRRMDASASAATVRAFLERGLNELDTAFMYCDGQSESILGSLGLGLGSGDCTVKIATKANPWDGKSLKPDSVRSQLETSLKRLQCPRVDLFYLHAPDHGTPIVETLQACQQLHQEGKFVELGLSNYASWEVAEIYTLCKSNGWILPTVYQGMYNATTRQVETELLPCLRYFGLRFYAYNPLAGGLLTGKYRYEDKDGKQPEGRFFGNSWSETYRNRFWKEHHFEAIALVEKALKTTYGTSAPSMTSAALRWMYHHSQLQGTRGDAVILGMSSLEQLEQNLAATEEGPLEPAVVEAFNQAWNVVAHECPNYFR", "length": 367 }, "evidence": [ { "id": "F1SUP1", "url": "https://omabrowser.org/oma/group/F1SUP1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CG76-1", "protein_name": "Aflatoxin B1 aldehyde reductase member 2", "gene_name": "Akr7a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLRAASRAVGRAAVRSAQRSGTSVGRPLAMSRPPPPRAASGAPLRPATVLGTMEMGRRMDASASAASVRAFLERGHSELDTAFMYCDGQSENILGGLGLGLGSGDCTVKIATKANPWEGKSLKPDSIRSQLETSLKRLQCPRVDLFYLHAPDHSTPVEETLRACHQLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVEAELLPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNNWAETYRNRFWKEHHFEAIALVEKALQTTYGTNAPRMTSAALRWMYHHSQLQGTRGDAVILGMSSLEQLEQNLAATEEGPLEPAVVEAFDQAWNMVAHECPNYFR", "length": 367 }, "evidence": [ { "id": "F1SUP1", "url": "https://omabrowser.org/oma/group/F1SUP1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "oxidoreductase activity", "id": "GO:0016491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016491", "evidence": [ { "database": "UniProtKB", "id": "F1SUP1", "url": "https://www.uniprot.org/uniprotkb/F1SUP1" } ], "pmid": "" }, { "name": "alcohol dehydrogenase (NADP+) activity", "id": "GO:0008106", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008106", "evidence": [ { "database": "UniProtKB", "id": "F1SUP1", "url": "https://www.uniprot.org/uniprotkb/F1SUP1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SUP1", "url": "https://www.uniprot.org/uniprotkb/F1SUP1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 211, "end_pos": 213, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SUP1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUP1" }, { "id": "PF00248", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00248" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NADP-dependent oxidoreductase", "eco_id": "ECO_0000259", "start_pos": 51, "end_pos": 357, "start_aa": "Val", "end_aa": "Trp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 211, "end_pos": 213 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SPQ0-1", "uniprot_ac": "F1SPQ0", "uniprot_id": "F1SPQ0_PIG", "mass": { "chemical_mass": 58028.0, "monoisotopic_mass": 58028.0 }, "refseq": { "ac": "XP_013843692", "name": "T-complex protein 11-like protein 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843692" }, "gene_names": [ { "name": "TCP11L2", "type": "recommended", "evidence": [ { "id": "F1SPQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0" } ] }, { "name": "TCP11L2", "type": "synonym", "evidence": [ { "id": "XP_013843692", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843692" } ] } ], "protein_names": [ { "name": "T-complex 11 like 2", "type": "synonym", "evidence": [ { "id": "F1SPQ0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0/entry#names_and_taxonomy" } ] }, { "name": "T-complex protein 11-like protein 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_013843692", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843692" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPQ0", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TCP11L2", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0", "locus": { "chromosome": "5", "start_pos": 13934170, "end_pos": 13982999, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024881", "url": "https://www.ensembl.org/id/ENSSSCG00000024881" } ] } } ], "crossref": [ { "id": "ENSSSCG00000024881", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024881", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100620963", "url": "https://www.ncbi.nlm.nih.gov/gene/100620963", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008862", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008862", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620963", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620963", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YVINTMG", "url": "https://omabrowser.org/oma/group/YVINTMG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPQ0", "url": "https://www.orthodb.org/?gene=F1SPQ0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12832", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12832", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12832:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12832:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05794", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05794", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013843692", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843692", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R185", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R185", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R185-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R185-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPQ0", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPQ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDEVMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEETPSALDQTTEWIKESVHEELLSLSEAALTPGAENSSKPSLSPTLVLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKMIACLSLITNNMVGALTEGLPELAIKLKRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPALNAEVQANLVGQFSSIEEEDNPVWSLIDKRIQLYMKSLLCLPSPQKCMPPVPGGLTVIQQELEVLGSQYANIVNLNKQVYGPFYANILRKLLFSEEATGKADASSSTN", "length": 519, "header": "tr|F1SPQ0-1|F1SPQ0_PIG Isoform 1 of T-complex 11 like 2 OS=Sus scrofa OX=9823 GN=TCP11L2 PE=3 SV=4 CANONICAL=F1SPQ0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R185-1", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0/entry#A0A5G2R185-1", "sequence": { "sequence": "MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDEVMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEETPSKYNIWVYIIEREIEK", "length": 273, "header": "tr|A0A5G2R185-1|F1SPQ0_PIG Computationally mapped isoform of T-complex 11 like 2 OS=Sus scrofa OX=9823 GN=TCP11L2 PE=3 SV=1 CANONICAL=F1SPQ0-1" }, "locus": { "chromosome": "5", "start_pos": 13973316, "end_pos": 13958167, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066546.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066546.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070873.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070873.1" } ] } }, { "isoform_ac": "F1SPQ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0/entry#F1SPQ0-1", "sequence": { "sequence": "MPFNGEKHCVGEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDEVMAAARNLSNMTLAHEIAVNENFQLKQDALPENSLAGRVRHIVHQAFWDVLESELNAEPPEYEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDDDIRELKATGNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEETPSALDQTTEWIKESVHEELLSLSEAALTPGAENSSKPSLSPTLVLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKMIACLSLITNNMVGALTEGLPELAIKLKRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPALNAEVQANLVGQFSSIEEEDNPVWSLIDKRIQLYMKSLLCLPSPQKCMPPVPGGLTVIQQELEVLGSQYANIVNLNKQVYGPFYANILRKLLFSEEATGKADASSSTN", "length": 519, "header": "tr|F1SPQ0-1|F1SPQ0_PIG Isoform 1 of T-complex 11 like 2 OS=Sus scrofa OX=9823 GN=TCP11L2 PE=3 SV=4 CANONICAL=F1SPQ0-1" }, "locus": { "chromosome": "5", "start_pos": 13973316, "end_pos": 13936350, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027937.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027937.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021044.4", "url": "https://www.ensembl.org/id/ENSSSCP00000021044.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R185", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R185" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620963", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620963", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A7Z033-1", "protein_name": "T-complex protein 11-like protein 2", "gene_name": "TCP11L2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFNGEKQCVSEDQPSDSDSSRFSESMASLSDYECSRQSFTSDSSSKSSSPASTSPPRVVTFDEVMAAARNLSNMTLAHEIAVNENFQLKQDALPESSLAGRVRHIVHQAFWDVLESELNAEPPEYEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDDDIRELKATSNIVEVLRQIFHVLDLMKMDMVNFTIRSLRPHLQRQLVDYERTKFQEILEETPSALNQTTEWIKESVHEELLSLSEATLTPGAENNSKPSLSPTLVLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKMIACLALITNNMVGALTEGLPELAVRLKRISAVLLEGMNKETFNLKEVLNSIGIQICVEVNKTLMERGLPTLNAEVQDNLVGQFSSIEEEDNPIWSLIDKRIQLYMKSLLCLPSPPRCMPPVPGGLAVVQQELESLGLQYANIVNLNKQVYGPFYANILRKLLFGEEATGKAEASSSTN", "length": 519 }, "evidence": [ { "id": "F1SPQ0", "url": "https://omabrowser.org/oma/group/F1SPQ0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q568Z0-1", "protein_name": "T-complex protein 11-like protein 2", "gene_name": "Tcp11l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPFNGEKQYVNEDQQSDSESSRFSESTASLSDYGCSRQSFTSDSSSKSSSPASTSPPRGIMFDDVMAAAKNLSDMTLAHEIAVNENFQLRPNALPENSLAGQVKRVVHQAFWDVLEADLSAEPPQYEYAIKLFEEIREILLSFLTPGGNRLHSQICEVLDIDLIRQQAEHSAVDIQGLANYVISTMGKICAPVRDEDIRELKATTNIVEMLRQIFRVLDLMRMDMTNFVIRNIRPHIQHHLVEYERNKFQEVLEETPNALSQTTEWLKESIDKELFSETDVAPGAEHSSTPSLSPLTVLNNCYLKLLQWDYQKNVLPETLMTDGPRLQELTEKLNQLKMIACVSLITNNMVGAVTEGLPELANRLKRISAVLLEGMSKQTFNLKEALNSIGVQTCAEVNKALKERGSPTLNAEVQANLVGQFTSLEEKDNPVCALMDKRIQLYMKSLLCLPSTQKSRPPVPGGLDVIQQELEVLGCQYANIVNLNKQVYGPFYANIFRKLLFRDEAMGKIDASLPTN", "length": 517 }, "evidence": [ { "id": "F1SPQ0", "url": "https://omabrowser.org/oma/group/F1SPQ0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5RGW3-1", "protein_name": "T-complex protein 11-like protein 2 isoform X1", "gene_name": "tcp11l2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPLNDERPTSTSSTVASEDQSSDTESSERCDSLTSSSDVDCSRQSFTSDSSSKHNSPSCSPPKILTLDEVMASARDLSNLSLAHEIVVNRNFHLEPPDLPQNSLEKRVKDMVHKAFWDCLESELNDDPPEYDYAIKLLEEIRDTLLSFLNPGANRLRTQIMEVLDMDLIRQQADNNAVDIQGLVSYIINTMGKFCAPVRDDEIKKLKENSGDCVTLFKEIFRVLDLMKMDMVNFTIQSFRPELQRQSVEYERAKFQSILERTPNALEHTTEWIKSSIEEATQIMPPAEKSSDSGQSGRPLPGPSLVLNTAYIKLLTWDDSKGPLPETVMTDEARLQVMQRSLQLYQTVASVLLIVYSSIGGAVSGLPALAERLKKMTVVLLEGMHNTEFKLNEALGNVSVQICCEVNKSLAERNFPALPDELQATLKGQICDVTQENNPVRTLVEGRVQQYLWVVLSSSSSHRTPPPVPPGLTLIQQELMPLSLSFANLVNFNKKVYGPFYFSILKSLLFSDTQNHIPPGPPSSPLKSK", "length": 529 }, "evidence": [ { "id": "F1SPQ0", "url": "https://omabrowser.org/oma/group/F1SPQ0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8K1H7-1", "protein_name": "T-complex protein 11-like protein 2", "gene_name": "Tcp11l2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPFNGEKQCVSEDQQSDSESSRFAEGVASLSDYECSRQSFTSDSSSKSSSPASTSPPRGLMFDDVMAAAKNLSDMTLAHEIAVNENFQLKQNALPENSLAGQVKRVVHQAFWDVLEADLSAEPPQYEYAIKLFEEIREILLSFLTPGGNRLHSQICEVLDIDLIRQQAEHSAVDIQGLANYVITTMGKICAPVRDEDIRELKATTNIVEMLRQIFRVLDLMRMDMMNFVIRNIRPHIQHHLVEYERNKFQEVVEETPNALSQTTEWLKESIDKELLSETDVAPAAEHSSTPSLSPLLVLNNCYLKLLQWDYQKKVLPETLMTDGPRLQELSEKLNQLKMTACVALITNNMVGAVTEGLPELANRLKRISAVLLEGMNKETFNLKEALHSIGVQTCAEVNKALEERGSPTLNAEVQANLVGQLSSLEEKDNPVCTLMDKRIQLYMKGLLCLPSTQKSMPPVPGGLDVIQRELEVLGCQYANIVNLNKQVYGPFYANIFRKLLFRDEAVGKIDASLPTN", "length": 517 }, "evidence": [ { "id": "F1SPQ0", "url": "https://omabrowser.org/oma/group/F1SPQ0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N4U5-1", "protein_name": "T-complex protein 11-like protein 2", "gene_name": "TCP11L2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPFNGEKQCVGEDQPSDSDSSRFSESMASLSDYECSRQSFASDSSSKSSSPASTSPPRVVTFDEVMATARNLSNLTLAHEIAVNENFQLKQEALPEKSLAGRVKHIVHQAFWDVLDSELNADPPEFEHAIKLFEEIREILLSFLTPGGNRLRNQICEVLDTDLIRQQAEHSAVDIQGLANYVISTMGKLCAPVRDNDIRELKATGNIVEVLRQIFHVLDLMQMDMANFTIMSLRPHLQRQLVEYERTKFQEILEETPSALDQTTEWIKESVNEELFSLSESALTPGAENTSKPSLSPTLVLNNSYLKLLQWDYQKKELPETLMTDGARLQELTEKLNQLKIIACLSLITNNMVGAITGGLPELASRLTRISAVLLEGMNKETFNLKEVLNSIGIQTCVEVNKTLMERGLPTLNAEIQANLIGQFSSIEEEDNPIWSLIDKRIKLYMRRLLCLPSPQKCMPPMPGGLAVIQQELEALGSQYANIVNLNKQVYGPFYANILRKLLFNEEAMGKVDASPPTN", "length": 519 }, "evidence": [ { "id": "F1SPQ0", "url": "https://omabrowser.org/oma/group/F1SPQ0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SPQ0", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "F1SPQ0", "url": "https://www.uniprot.org/uniprotkb/F1SPQ0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 227, "end_pos": 229, "annotation": "n_glycosylation_sequon" }, { "start_pos": 289, "end_pos": 291, "annotation": "n_glycosylation_sequon" }, { "start_pos": 302, "end_pos": 304, "annotation": "n_glycosylation_sequon" }, { "start_pos": 401, "end_pos": 403, "annotation": "n_glycosylation_sequon" }, { "start_pos": 71, "end_pos": 73, "annotation": "n_glycosylation_sequon" }, { "start_pos": 74, "end_pos": 76, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 227, "end_pos": 229 }, { "start_pos": 289, "end_pos": 291 }, { "start_pos": 302, "end_pos": 304 }, { "start_pos": 401, "end_pos": 403 }, { "start_pos": 71, "end_pos": 73 }, { "start_pos": 74, "end_pos": 76 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU30-1", "uniprot_ac": "F1SU30", "uniprot_id": "F1SU30_PIG", "mass": { "chemical_mass": 76420.0, "monoisotopic_mass": 76420.0 }, "refseq": { "ac": "XP_005662388", "name": "coiled-coil domain containing 138", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662388" }, "gene_names": [ { "name": "CCDC138", "type": "recommended", "evidence": [ { "id": "F1SU30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU30" } ] }, { "name": "CCDC138", "type": "synonym", "evidence": [ { "id": "XP_005662388", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662388" } ] } ], "protein_names": [ { "name": "Coiled-coil domain containing 138", "type": "synonym", "evidence": [ { "id": "F1SU30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU30/entry#names_and_taxonomy" } ] }, { "name": "coiled-coil domain containing 138", "type": "synonym", "evidence": [ { "id": "XP_005662388", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662388" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU30", "url": "https://www.uniprot.org/uniprotkb/F1SU30" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC138", "url": "https://www.uniprot.org/uniprotkb/F1SU30", "locus": { "chromosome": "3", "start_pos": 47523529, "end_pos": 47470709, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008135", "url": "https://www.ensembl.org/id/ENSSSCG00000008135" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008135", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008135", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511190", "url": "https://www.ncbi.nlm.nih.gov/gene/100511190", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR038798", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038798", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048750", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048750", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048751", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048751", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EWISDHH", "url": "https://omabrowser.org/oma/group/EWISDHH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SU30", "url": "https://www.orthodb.org/?gene=F1SU30", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR34523", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34523", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR34523:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR34523:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21035", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21035", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21037", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21037", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005662388", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005662388", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R1G3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R1G3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU30", "url": "https://www.uniprot.org/uniprotkb/F1SU30", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU30-1", "url": "https://www.uniprot.org/uniprotkb/F1SU30-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MELRVVKPPGQDLVVERLKSRYGLGGGCPTEPGWRRSDGAERPERRRRPPRTPDDVDVFSCGDELGSSLSCDWDERRRGSAPLCSSFKLRTGNCLDDDLDSFRDVKQQEREEEFIGDDHRVSTSRVKTQSHKEIGKAVAWPPDLASHSRNWPGCRSDGSDSPGKRVGAPASGASDRQGVLPLQVNQIYEELFQIHQKLQCETAAQQEFAEELHKRERFLVEREQLLFRHEAALSKIKGVKEEVLTRFQIIKEQHDAEVEHLTEVVKERNKESKRLRSSFDALKELNDSLKKQLHEVSEENRKLEVQAKRVQARLDNLQRKYEFMTIQRLKGNPHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKHEDSGMDGEKPQLTFASQRDDIQEKCVKLLPVMTEQLQWMPFVGAKLHEPFVKFIYWSLRQLDAGAQHSTMTSTLRRLGEDIFKGVVTKGIQGNSSEHSVENKPKTAAFFKSSSLPLRFPSTLIVLKTVTQADHLAQAFDSLCLDLKTDEGKILFLEYQAVPVILSHLKISSKGLLSNVIDSLLQMTVESRSLQPFLEACSTSLFFRTCSMLLRAPKLELHILEKLSIILQKLSKIKSNKKLFELFTIHLMLQELQRTTHPEHAFLCINLNSTLFNLGLTKGNSLASNGSH", "length": 672, "header": "tr|F1SU30-1|F1SU30_PIG Isoform 1 of Coiled-coil domain containing 138 OS=Sus scrofa OX=9823 GN=CCDC138 PE=4 SV=2 CANONICAL=F1SU30-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R1G3-1", "url": "https://www.uniprot.org/uniprotkb/F1SU30/entry#A0A5G2R1G3-1", "sequence": { "sequence": "MELRVVKPPGQDLVVERLKSRYGLGGGCPTEPGWRRSDGAERPERRRRPPRTPDDVDVFSCGDELGSSLSCDWDERRRGSAPLCSSFKLRTGNCLDDDLDSFRDVKQQEREEEFIGDDHRVSTSRVKTQSHKEIGKAVAWPPDLASHSRNWPGCRSDGSDSPGKRVGAPASGASDRQGVLPLQVNQIYEELFQIHQKLQCETAAQQEFAEELHKRERFLVEREQLLFRHEAALSKIKGVKEEVLTRFQIIKEQHDAEVEHLTEVVKERNKESKRLRSSFDALKELNDSLKKQLHEVSEENRKLEVQAKRVQARLDNLQRKYEFMTIQRLKGNPHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKHEDSGMDGEKPQLTFASQRDDIQEKCVKLLPVMTEQLQWMPFVGAKLHEPFVKFIYWSLRQLDAGAQHSTMTSTLRRLGEDIFKGVVTKGIQGNSSEHSVENKPKTAAFFKSSSLPLRFPSTLIVLKTVTQADHLAQAFDSLCLDLKTDEGKILFLEYQAVPVILSHLKISSKGLLSNVIDSLLQMTVESRSSHVSPSPGGKDQPSFDCHPCSLPVPTQEVGRALRLLTWCLLYSSVRVLWSVGFFSGLALV", "length": 633, "header": "tr|A0A5G2R1G3-1|F1SU30_PIG Computationally mapped isoform of Coiled-coil domain containing 138 OS=Sus scrofa OX=9823 GN=CCDC138 PE=4 SV=1 CANONICAL=F1SU30-1" }, "locus": { "chromosome": "3", "start_pos": 47516296, "end_pos": 47470730, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082693.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082693.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070954.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070954.1" } ] } }, { "isoform_ac": "F1SU30-1", "url": "https://www.uniprot.org/uniprotkb/F1SU30/entry#F1SU30-1", "sequence": { "sequence": "MELRVVKPPGQDLVVERLKSRYGLGGGCPTEPGWRRSDGAERPERRRRPPRTPDDVDVFSCGDELGSSLSCDWDERRRGSAPLCSSFKLRTGNCLDDDLDSFRDVKQQEREEEFIGDDHRVSTSRVKTQSHKEIGKAVAWPPDLASHSRNWPGCRSDGSDSPGKRVGAPASGASDRQGVLPLQVNQIYEELFQIHQKLQCETAAQQEFAEELHKRERFLVEREQLLFRHEAALSKIKGVKEEVLTRFQIIKEQHDAEVEHLTEVVKERNKESKRLRSSFDALKELNDSLKKQLHEVSEENRKLEVQAKRVQARLDNLQRKYEFMTIQRLKGNPHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKHEDSGMDGEKPQLTFASQRDDIQEKCVKLLPVMTEQLQWMPFVGAKLHEPFVKFIYWSLRQLDAGAQHSTMTSTLRRLGEDIFKGVVTKGIQGNSSEHSVENKPKTAAFFKSSSLPLRFPSTLIVLKTVTQADHLAQAFDSLCLDLKTDEGKILFLEYQAVPVILSHLKISSKGLLSNVIDSLLQMTVESRSLQPFLEACSTSLFFRTCSMLLRAPKLELHILEKLSIILQKLSKIKSNKKLFELFTIHLMLQELQRTTHPEHAFLCINLNSTLFNLGLTKGNSLASNGSH", "length": 672, "header": "tr|F1SU30-1|F1SU30_PIG Isoform 1 of Coiled-coil domain containing 138 OS=Sus scrofa OX=9823 GN=CCDC138 PE=4 SV=2 CANONICAL=F1SU30-1" }, "locus": { "chromosome": "3", "start_pos": 47522410, "end_pos": 47470730, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008912.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008912.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008686.2", "url": "https://www.ensembl.org/id/ENSSSCP00000008686.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R1G3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R1G3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "D3ZGR6-1", "protein_name": "Coiled-coil domain containing 138", "gene_name": "Ccdc138", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MERRVVKPPGQDMVVERLKSRYGLAGRCSVEESDMTGVWAALMNQQHALSNFDQTKYKRRILTSPDDLDTYSSGDKVGSSPRYYSDERKHPITSLCSSFKHLNANCLDDELDSFHDLKKWETEKELIEDDHRDGGSKITKHSFKEMENDAPPTNMASSRLQTECCSGSVDTPPKHAVYPRPRGSKKQGLLPHQINQIYDELFHIHMKLQNETAAQQKFAEELQKREQFLAEREQLLFRHETALSKIKGVKEEVLTRFQILKEQHSTEIEHLTETLKEKNKENKRMRSSFDTLRELNDNLRKQLNEVSEENKKMEIQAKRVQARLDNLQRKYEFMTVQRLKGDSHAAHEVKSSKQEKVPASKPFKAALNGQVYELIAVFMDWISDCHLSKVEPEEPGVDGEKPPAKPSQRSDIQEKCVKLLPMMTEQLQWMPLVNTKLHEPFVRFIYWSLRQLDAGTQHSTMTSTLRRLGEDIFKGVTMKGTQDNSLEHSVENKAKTAAFFKSSSLSLRFLSTLIVLKTVTQADYLAQAFDSLCLDLKTDEGKTLFLEYQAVPVILRHLRISSKGLLSNVIDSLLQMTVESKSLQPFLEACSNSLFFRTCSVLLRTPKLDLHILEKLSIILQKLSKIKSNKKLFEVFTIHLMLQEIQRTTHPEHAFLCINLNSTLFNLGLTKCNSLVSSIGH", "length": 681 }, "evidence": [ { "id": "F1SU30", "url": "https://omabrowser.org/oma/group/F1SU30/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q0VF22-1", "protein_name": "Coiled-coil domain-containing protein 138", "gene_name": "Ccdc138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERRVVKPPGQDMVVERLKSRYGLAGRCPVEENDMTGVWAALMNQQHELSDFDQTKYKRRIVTSPDGLDTYSSGDKVGSSPRYYSDGRNHPTPPFCSSFKHLNVNCLDDELDSFHDLKKWETEKELMEDDHRDGASKITKQSFKEMETDALMTSMASGLETECCSGSIDSPLKQAVYPRPKVSKKQGLLPHEINQIYDELYHIHMKLQYETTAQKKFAEELQKREQFLAEREQLLFSHETALSKIKGVKEEVLTRFQILKEQHGTEIEHLTEALKEKNKENKRMRSSFDTLRELNDNLRKQLNEVSEENKKMEIQAKRVQARLDNLQRKYEFMTVQRLKGDSHAAHEVKSSKQEKAPAPKPFKAALNGQVYELLTVFMDWISDCHLSKVEPEEPGVDGGKPPAKPSQRSDIQEKCVKLLPMMTEQLQWMPLVSAKLHEPFVRFIYWSLRQLDASARQSTMASTLRRLGEDVFKGVTMKGTQDNSLEHSVENKAKTAVFFKSSSLPLRFLSTLIVLRTVTQADYLAQAFDSLCLDLKTDEGKTLFLEYQAIPVILKHLRISSKGLLSNVIDSLLQMTVESKSLQPFLEACSNSLFFRTCSVLLRTPKLDLHILEKLSIILQKLSKIKSNKKLFEVFTIHLMLQEIQRTTHPEHAFLCINLNSTLFNLGLTKCNSLVTSTSH", "length": 680 }, "evidence": [ { "id": "F1SU30", "url": "https://omabrowser.org/oma/group/F1SU30/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96M89-1", "protein_name": "Coiled-coil domain-containing protein 138", "gene_name": "CCDC138", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPRVVKPPGQDLVVESLKSRYGLGGSCPDEYDFSNFYQSKYKRRTLTSPGDLDIYSGDKVGSSLKYSDESKHCRTPLGSLFKHVNVNCLDDELDSFHDLKKQETEEELIENDYRVSTSKITKQSFKEIEKVALPTNTTSSRPRTECCSDAGDSPLKPVSCPKSKASDKRSLLPHQISQIYDELFQIHLKLQCETAAQQKFAEELQKRERFLLEREQLLFRHENALSKIKGVEEEVLTRFQIIKEQHDAEVEHLTEVLKEKNKETKRLRSSFDALKELNDTLKKQLNEASEENRKIDIQAKRVQARLDNLQRKYEFMTIQRLKGSSHAVHEMKSLKQEKAPVSKTYKVPLNGQVYELLTVFMDWISDHHLSKVKHEESGMDGKKPQLKFASQRNDIQEKCVKLLPLMTEQLQWMPFVNIKLHEPFVKFIYWSLRQLDAGAQHSTMTSTLRRLGEDIFKGVVTKGIQDNSPQHSVENKPKTAAFFKSSNLPLRFLSTLIVLKTVTQADYLAQAFDSLCLDLKTEEGKTLFLEYQAVPVILSHLRISSKGLLSNVIDSLLQMTVESKSLQPFLEACSNSLFFRTCSVLLRAPKLDLQILEKLSIILQKLSKIKSNKKLFELFTIHLMLQEIQRTTNPEHAFLCINLNSTLFNLGLTKCNSLVSSASP", "length": 665 }, "evidence": [ { "id": "F1SU30", "url": "https://omabrowser.org/oma/group/F1SU30/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" }, { "start_pos": 475, "end_pos": 477, "annotation": "n_glycosylation_sequon" }, { "start_pos": 652, "end_pos": 654, "annotation": "n_glycosylation_sequon" }, { "start_pos": 669, "end_pos": 671, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SU30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU30" }, { "id": "PF21035", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21035" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Coiled-coil", "eco_id": "ECO_0000259", "start_pos": 369, "end_pos": 658, "start_aa": "Met", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SU30", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU30" }, { "id": "PF21037", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21037" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Coiled-coil-domain-containing protein 138 coiled-coil", "eco_id": "ECO_0000259", "start_pos": 270, "end_pos": 328, "start_aa": "Lys", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 286, "end_pos": 288 }, { "start_pos": 475, "end_pos": 477 }, { "start_pos": 652, "end_pos": 654 }, { "start_pos": 669, "end_pos": 671 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1STP2-1", "uniprot_ac": "F1STP2", "uniprot_id": "F1STP2_PIG", "mass": { "chemical_mass": 83066.0, "monoisotopic_mass": 83066.0 }, "refseq": {}, "gene_names": [ { "name": "NAALAD2", "type": "recommended", "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ] } ], "protein_names": [ { "name": "N-acetylated-alpha-linked acidic dipeptidase 2", "type": "recommended", "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#names_and_taxonomy" } ] }, { "name": "3.4.17.21", "type": "synonym", "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#names_and_taxonomy" } ] }, { "name": "Glutamate carboxypeptidase III", "type": "synonym", "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#names_and_taxonomy" } ] }, { "name": "N-acetylated-alpha-linked acidic dipeptidase II", "type": "synonym", "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Aminopeptidase with broad substrate specificity. Has lower activity with substrates that have Asp or Glu in the P2' position, or Pro in the P3' position. Lacks activity with substrates that have both Pro in the P3' position and Asp or Glu in the P2' position. Lacks carboxypeptidase activity. Lacks dipeptidyl-peptidase IV type activity.", "evidence": [ { "database": "UniProtKB", "id": "A0A286ZMF8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMF8#function" }, { "database": "UniProtKB", "id": "ARBA00059290", "url": "https://www.uniprot.org/uniprotkb/ARBA00059290#function" } ] }, { "annotation": "Has N-acetylated-alpha-linked-acidic dipeptidase (NAALADase) activity. Also exhibits a dipeptidyl-peptidase IV type activity. Inactivates the peptide neurotransmitter N-acetylaspartylglutamate.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R6C0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6C0#function" }, { "database": "UniProtKB", "id": "ARBA00057657", "url": "https://www.uniprot.org/uniprotkb/ARBA00057657#function" }, { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NAALAD2", "url": "https://www.uniprot.org/uniprotkb/F1STP2", "locus": { "chromosome": "9", "start_pos": 23161832, "end_pos": 23111059, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014933", "url": "https://www.ensembl.org/id/ENSSSCG00000014933" } ] } } ], "crossref": [ { "id": "F1STP2", "url": "https://alphafold.ebi.ac.uk/entry/F1STP2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000014933", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014933", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02121", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02121", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd08022", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08022", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003137", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003137", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007365", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007365", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007484", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007484", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036757", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036757", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039373", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039373", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046450", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046450", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "TEWMEEY", "url": "https://omabrowser.org/oma/group/TEWMEEY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10404", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10404", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10404:SF38", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10404:SF38", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02225", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02225", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04253", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04253", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF04389", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04389", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8963693", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8963693", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZMF8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMF8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZMF8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMF8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R272", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R272", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R272-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R272-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6C0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6C0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6C0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6C0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STP2-1", "url": "https://www.uniprot.org/uniprotkb/F1STP2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAKSRARQYLWLCVVAALASFLGGFTVGWFSKPLKVAVTSTDSPQNLRSQLLSEMKAENIKSFLRSFTELPHLAGTEQNLLLAKKIQTQWQKFGLDSAKLVHYDVLLSYPNKTNANYISVLDEHGVEIFKTSYLEPPPEGYENVKNVVPPYNAFSPQGMPEGELIYVNYARTEDFFKLERELNINCTGKIVIARYGKIFRGNKVKNAMLAGAKGIILYSDPADYSAPGVQPYPKGWNLPGTGVQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEDGVGIPQIPVHPIGYNDAEIILRYLGGTAAPDESWKGSLNVDYNIGPGFAGHDTFRKVKMHVHNINQITRIYNVIGTIKGSVEPDRYIILGGHRDSWVFGGIDPTSGAAVLQEVAQSFGKLMSRGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKTLQERGVAYINSDSSVEGNYTLRVDCTPLLYQLVYKLTKEISSPDDGFESKSLFESWLKKDPSSENKNLPRISKLGSGSDFEAYFQRLGIASGRIRYTKNRKTDNYSSYPVYHTIYETFELVENFYDPKFKKQLAVAQLRGALVYELADSKIIPFNIQDYAKALEIYATSIYKLSKKHDQEFRHYGVSFDSLFSAVKNFSEAASDFHRRLSQVDLNNPVAVRIMNDQLMLLERAFIDPLGLPGRPFYRHIIFAPSSHNKYAGESFPGIYDAMFDIDNKADAHSAWKEVKKHISVAAFTIQAAAGTLKEFL", "length": 740, "header": "tr|F1STP2-1|F1STP2_PIG Isoform 1 of N-acetylated-alpha-linked acidic dipeptidase 2 OS=Sus scrofa OX=9823 GN=NAALAD2 PE=1 SV=3 CANONICAL=F1STP2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMF8-1", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#A0A286ZMF8-1", "sequence": { "sequence": "MAKSRARQYLWLCVVAALASFLGGFTVGWFSKPLKVAVTSTDSPQNLRSQLLSEMKAENIKSFLRSFTELPHLAGTEQNLLLAKKIQTQWQKFGLDSAKLVHYDVLLSYPNKTNANYISVLDEHGVEIFKTSYLEPPPEGYENVKNVVPPYNAFSPQGMPEGELIYVNYARTEDFFKLERELNINCTGKIVIARYGKIFRGNKVKNAMLAGAKGIILYSDPADYSAPGVQPYPKGWNLPGTGVQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEDGVGIPQIPVHPIGYNDAEIILRYLGGTAAPDESWKGSLNVDYNIGPGFAGHDTFRKVKMHVHNINQITRIYNVIGTIKGSVEPGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKTLQERGVAYINSDSSVEGNYTLRVDCTPLLYQLVYKLTKEISSPDDGFESKSLFESWLKKDPSSENKNLPRISKLGSGSDFEAYFQRLGIASGRIRYTKNRKTDNYSSYPVYHTIYETFELVENFYDPKFKKQLAVAQLRGALVYELADSKIIPFNIQDYAKALEIYATSIYKLSKKHDQEFRHYGVSFDSLFSAVKNFSEAASDFHRRLSQVDLNNPVAVRIMNDQLMLLERAFIDPLGLPGRPFYRHIIFAPSSHNKYAGESFPGIYDAMFDIDNKADAHSAWKEVKKHISVAAFTIQAAAGTLKEFL", "length": 700, "header": "tr|A0A286ZMF8-1|A0A286ZMF8_PIG Computationally mapped isoform of Aminopeptidase NAALADL1 OS=Sus scrofa OX=9823 GN=NAALAD2 PE=1 SV=1 CANONICAL=F1STP2-1" }, "locus": { "chromosome": "9", "start_pos": 23160960, "end_pos": 23111100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038305.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038305.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032644.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032644.1" } ] } }, { "isoform_ac": "A0A5G2R272-1", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#A0A5G2R272-1", "sequence": { "sequence": "MAKSRARQYLWLCVVAALASFLGGFTVGWFSKPLKVAVTSTDSPQNLRSQLLSEMKAENIKSFLRSFTELPHLAGTEQNLLLAKKIQTQWQKFGLDSAKLVHYDVLLSYPNKTNANYISVLDEHGVEIFKTSYLEPPPEGYENVKNVVPPYNAFSPQGMPEGELIYVNYARTEDFFKLERELNINCTGKIVIARYGKIFRGNKVKNAMLAGAKGIILYSDPADYSAPGVQPYPKGWNLPGTGVQRGNVLNLNGAGDPLTPGYPAKGTSSLLQVATTNMLENRFLASMMLCLILTIKQMLIQPGKK", "length": 305, "header": "tr|A0A5G2R272-1|F1STP2_PIG Computationally mapped isoform of N-acetylated-alpha-linked acidic dipeptidase 2 OS=Sus scrofa OX=9823 GN=NAALAD2 PE=1 SV=1 CANONICAL=F1STP2-1" }, "locus": { "chromosome": "9", "start_pos": 23160892, "end_pos": 23111100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000071329.2", "url": "https://www.ensembl.org/id/ENSSSCT00000071329.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071199.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071199.1" } ] } }, { "isoform_ac": "A0A5G2R6C0-1", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#A0A5G2R6C0-1", "sequence": { "sequence": "MAKSRARQYLWLCVVAALASFLGGFTVGWFSKPLKVAVTSTDSPQNLRSQLLSEMKAENIKSFLRSFTELPHLAGTEQNLLLAKKIQTQWQKFGLDSAKLVHYDVLLSYPNKTNANYISVLDEHGVEIFKTSYLEPPPEGYENVKNVVPPYNAFSPQGMPEGELIYVNYARTEDFFKLERELNINCTGKIVIARYGKIFRGNKVKNAMLAGAKGIILYSDPADYSAPGVQPYPKGWNLPGTGVQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEDGVGIPQIPVHPIGYNDAEIILRKVKMHVHNINQITRIYNVIGTIKGSVEPDRYIILGGHRDSWVFGGIDPTSGAAVLQEVAQSFGKLMSRGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKTLQERGVAYINSDSSVEGNYTLRVDCTPLLYQLVYKLTKEISSPDDGFESKSLFESWLKKDPSSENKNLPRISKLGSGSDFEAYFQRLGIASGRIRYTKNRKTDNYSSYPVYHTIYETFELVENFYDPKFKKQLAVAQLRGALVYELADSKIIPFNIQDYAKALEIYATSIYKLSKKHDQEFRHYGVSFDSLFSAVKNFSEAASDFHRRLSQVDLNNPVAVRIMNDQLMLLERAFIDPLGLPGRPFYRHIIFAPSSHNKYAGESFPGIYDAMFDIDNKADAHSAWKEVKKHISVAAFTIQAAAGTLKEFL", "length": 707, "header": "tr|A0A5G2R6C0-1|A0A5G2R6C0_PIG Computationally mapped isoform of N-acetylated-alpha-linked acidic dipeptidase 2 OS=Sus scrofa OX=9823 GN=NAALAD2 PE=1 SV=1 CANONICAL=F1STP2-1" }, "locus": { "chromosome": "9", "start_pos": 23160960, "end_pos": 23111100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074649.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074649.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072802.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072802.1" } ] } }, { "isoform_ac": "F1STP2-1", "url": "https://www.uniprot.org/uniprotkb/F1STP2/entry#F1STP2-1", "sequence": { "sequence": "MAKSRARQYLWLCVVAALASFLGGFTVGWFSKPLKVAVTSTDSPQNLRSQLLSEMKAENIKSFLRSFTELPHLAGTEQNLLLAKKIQTQWQKFGLDSAKLVHYDVLLSYPNKTNANYISVLDEHGVEIFKTSYLEPPPEGYENVKNVVPPYNAFSPQGMPEGELIYVNYARTEDFFKLERELNINCTGKIVIARYGKIFRGNKVKNAMLAGAKGIILYSDPADYSAPGVQPYPKGWNLPGTGVQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEDGVGIPQIPVHPIGYNDAEIILRYLGGTAAPDESWKGSLNVDYNIGPGFAGHDTFRKVKMHVHNINQITRIYNVIGTIKGSVEPDRYIILGGHRDSWVFGGIDPTSGAAVLQEVAQSFGKLMSRGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKTLQERGVAYINSDSSVEGNYTLRVDCTPLLYQLVYKLTKEISSPDDGFESKSLFESWLKKDPSSENKNLPRISKLGSGSDFEAYFQRLGIASGRIRYTKNRKTDNYSSYPVYHTIYETFELVENFYDPKFKKQLAVAQLRGALVYELADSKIIPFNIQDYAKALEIYATSIYKLSKKHDQEFRHYGVSFDSLFSAVKNFSEAASDFHRRLSQVDLNNPVAVRIMNDQLMLLERAFIDPLGLPGRPFYRHIIFAPSSHNKYAGESFPGIYDAMFDIDNKADAHSAWKEVKKHISVAAFTIQAAAGTLKEFL", "length": 740, "header": "tr|F1STP2-1|F1STP2_PIG Isoform 1 of N-acetylated-alpha-linked acidic dipeptidase 2 OS=Sus scrofa OX=9823 GN=NAALAD2 PE=1 SV=3 CANONICAL=F1STP2-1" }, "locus": { "chromosome": "9", "start_pos": 23160960, "end_pos": 23111100, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016290.5", "url": "https://www.ensembl.org/id/ENSSSCT00000016290.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015854.3", "url": "https://www.ensembl.org/id/ENSSSCP00000015854.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 379, "start_aa": "Thr", "end_pos": 379, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr379", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R272", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R272" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8963693", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8963693", "resource": "Reactome", "description": "Aspartate and asparagine metabolism" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XXI1-1", "protein_name": "Glutamate carboxypeptidase 2", "gene_name": "NAALAD2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MARNRATLCTRLGCPALLGCFVLGFLTGWLTKPTEKKRDSSDVYQSVRQRLVDEMKAESIRLFLRSFTKLPHLAGTEQNFLLAKQIQGQWKEFGLDSAELVHYDVLLSYPSETQPNYISVIDDRGNEIFNTSSFEPPPQGYENVTDILPPYNAFSVSGTPEADLVYVNYGRTEDFFKLKREMGINCTGKIVIARYGKIFRGNKVKNAVLAGAIGIILYSDPADYYAPGVDPYPDGWNLPDRGVQRGNVLNLNGAGDPLTPGYPAKEYIYRYKVNEGVGIPKIPVHPIGYHDAEVLLYAMGGPAAPDSTWKGALNVSYNIGPGFVRNISTRKVRMHVHTNNKVARIYNVIGIIRGAVEPDRYIILGGHRDSWVFGGIDPSTGAAVLQEVARSFGKMKTEGWRPKRTIIFASWDAEEFGLLGSTEWAEENARVLQERAVAYINTDSSIEGNYTLRVDCTPLLYKLIYNLTKEISSPDEGYENKSLYDSWLEKDPAPENNSYPRINKLGSGSDFEAYFQRLGIASGRVRYTKNRKTDKFSNYPVYHTVYETFELVERFYDPTFKKQLAIAKLRGKLVYELADSQVIPFDCRDYGEALKGYSDRIYKLAKKHEEQLKTYRVSFDPLFSAVGNFSEAAAEFHRRLEHVDRKDPVAVRIMNDQLMFIERAFIDPLGLPGRKFYRHVIFAPSSHNKYAGESFPGIYDAMFDIESKTDLHGAWEEVKRQISIAAFTVQAAAETLKEVA", "length": 740 }, "evidence": [ { "id": "F1STP2", "url": "https://omabrowser.org/oma/group/F1STP2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9TAD7-1", "protein_name": "N-acetylated-alpha-linked acidic dipeptidase 2", "gene_name": "NAALAD2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MATSGRRPYLWIFLAAALASFLAGFTVGWLSKPLKDTATSADSHQNLRWKLISEMKADNIKSFLRSFTKLPHLAGTEQNLLLAKKIQNQWKKFGLDSAELVHYDVLLSYPNETNANYISVTDEHGIEIFNTSYIEPPPDGYENVKNIVPPYNAFSPAGVPEGELVYVNYARTEDFFKLEREMNINCTGKIVIARYGRIFRGNKVKNAMLAGAKGIILYSDPADYSAPGVQPYPKGWNLPGTVAQRGNVLNLDGAGDPLTPGYPAKEYTFRLDVEDGVGIPQIPVHPIGYNDAEIFLRYLGGIASPDESWKGGLNVSYNIGPGFVGHDSFRKVRMHVYNINKITRIYNVIGTIRGSVEPDRYVILGGHRDSWVFGGIDPTSGAATLQEVAQSFGKLLSSGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKTLQERSVAYINSDSSIEGNYTLRVDCTPLLHQLVYKLTKEISSPDDGFESKSLYESWLAKDPSSESKTLPRINKLGSGSDFEAYFQRLGIASGRVRYTKNRKTDTYSSYPIYHTIYETFELVEKFYDPTFKKQLAVAQLRGALVYELADAKIIPFNIQDYAKTLENYARSIYNSSRKHEQACRGHGVSFESLFSAVQNFSEAASDFHRRLSQVDLNNPMVVRIMNDQLMFLERAFIDPLGLPGRPFYRHIIFAPSSRNKYAGESFPGIFDAMFDIENKADPHSAWKEVKKHISIAAFTIQAAAGTLKEFL", "length": 740 }, "evidence": [ { "id": "F1STP2", "url": "https://omabrowser.org/oma/group/F1STP2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D4A2Y7-1", "protein_name": "N-acetylated-alpha-linked acidic dipeptidase 2", "gene_name": "Naalad2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFQDSGCRCRKIGLQRCSYCRPQACSCSQRHSLTQKGMARPRQLRGLGMCITAVLASFIMGFTVGWFTKPLKETTTSSAYHQSIQQKLLSEMKAENIRSFLRSFTKLPHLAGTEQNLLLAKKIQTQWKKFGLDSANLVHYDVLLSYPNETNANYVSIVDEHGAEIFKTSYLEPPPDGYENVTNIVPPYNAFSAHGMPEGELVYVNYARTEDFFKLEREMHINCTGKIVIARYGKIFRGNKVKNAMLAGAMGIILYSDPADYFAPGVQPYPKGWNLPGAAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLPVEEAVGIPNIPVHPIGYNDAERLLRNLGGTAPPDQSWKGSLNVSYNIGPGFSGSEYSRKVRMHVHNINKITRIYNVIGTIRGSTEPDRYVILGGHRDSWVFGGIDPTTGTAVLQEIARSFGKLVNGGWKPRRTIIFASWDAEEFGLLGSTEWAEENAKILQERSIAYINSDSAIEGNYTLRVDCTPLLHQLVYKVAREISSPDDGFESKSLYESWLEKDPSPENKERPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVQNFYDPTFKKQLSVAQLRGALVYELADCVVIPFNIQDYAKALKNYAASIFNLSKKHDQQLRDHGVSFDPLFSAVKNFSEAASDFHRRLTQVDLNNPTAVRIMNDQQMLLERAFIDPLGLPGRPFYRHIIFAPSSHNKYAGESFPGIYDAMFDIENKADTHLAWAEVKKHISIAAFTIQAAAGTLTDVL", "length": 778 }, "evidence": [ { "id": "F1STP2", "url": "https://omabrowser.org/oma/group/F1STP2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7Y228-1", "protein_name": "Probable glutamate carboxypeptidase LAMP1", "gene_name": "LAMP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSKSKSLAFVIAALSYSFFSLFSSPPKSHYHELFISTSFSDNASVALNLHTLTRRPHVAGTVANAEAAEYVRSVFTSSALKSHVVAYQVSLTYPVHRSLVLTPTDSAKPITFLLEQEKLGDNPYANEVMPTFHGYAKSGNVSGPVVYANYGRVEDFVRLKKDMGVNVSGAVVIARYGQIYRGDIVKNAYEAGAVGVVIYTDKRDYGGDEWFPASKWMPPSGVQVGTVYNGLGDPTTPGWASVDGCERLSDEAVELSGDVPLIPSLPVSAADAEVILKTVVGDVSDGDVYPVGPGPGVLNLSYIGETVIAKIENVIGVIEGEEEPDRYVILGNHRDAWTFGAVDPNSGTAVLMEIAQRLDKLQKRGWKPRRTIILCNWDAEEYGLIGSTEWVEENREMLSSRAVAYLNVDCAVSGPGFHASATPQLDELIKVAAQEVRDPDNATQTIYESWIGSSDSVVIRRLGGGGSDYASFVQHVGVPGVDMSFGRGYPVYHSMYDDFTWMEKFGDPMFQRHVAMASVLGLVALRLADEEIIPFNYTSYALELKKSAEDLENEKLGHNIDVSTLIKSIEDLSTAAKHISLEKEAIKGALKVRELNDRLMMAERALTDRDGLSERPWYKHLIYGPSKYDDYGSKSFPGVDDAIDNAKKLNTKASWENVQHQIWRVSRAIRHASLVLKGELI", "length": 681 }, "evidence": [ { "id": "F1STP2", "url": "https://omabrowser.org/oma/group/F1STP2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CZR2-1", "protein_name": "N-acetylated-alpha-linked acidic dipeptidase 2", "gene_name": "Naalad2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MARPRHLRGLGMCITAVLASFIAGFTVGWFIKPLKETTTSAGYHQSIQQKLLSEMKAENIRSFLRSFTKLPHLAGTEQNLLLAKKIQTQWKKFGLDSANLVHYDVLLSYPNETNANYVSIVDEHGVEIFKTSYLEPPPDGYENVTNIIPPYNAFSASGMPEGELVYVNYARTEDFFKLEREMNINCTGKIVIARYGKIFRGNKVKNAMLAGAMGIILYSDPADYFAPDVQPYPKGWNLPGAAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLPVEEAVGIPNIPVHPIGYNDAERLLRNLGGAAPPDKSWKGSLNVSYNIGPGFTGSEYSRNIRMHVNNINKITRIYNVIGTIRGSTEPDRYVILGGHRDSWVFGGIDPTTGTAVLQEIARSFGKLVNGGWRPRRTIIFASWDAEEFGLLGSTEWAEENAKLLQERSIAYINSDSAIEGNYTLRVDCTPLLNQLVYKVAREISSPDDGFESKSLYESWLEKDPSPENKECPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVQNFYDPTFKKQLSVAQLRGALVYELADSVVIPFNIQDYAKALKNYAASIFNISKKHDQQLRNHAVSFDPLFSAVKNFSEAASDFHRRLTQVDLNNPIAVRIMNDQQMLLERAFIDPLGLPGRKFYRHIIFAPSSHNKYAGESFPGIYDAMFDIENKADPSLAWAEVKKHISIAAFTIQAAAGTLTNVL", "length": 740 }, "evidence": [ { "id": "F1STP2", "url": "https://omabrowser.org/oma/group/F1STP2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y3Q0-1", "protein_name": "N-acetylated-alpha-linked acidic dipeptidase 2", "gene_name": "NAALAD2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAESRGRLYLWMCLAAALASFLMGFMVGWFIKPLKETTTSVRYHQSIRWKLVSEMKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVHYDVLLSYPNETNANYISIVDEHETEIFKTSYLEPPPDGYENVTNIVPPYNAFSAQGMPEGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGGIAPPDKSWKGALNVSYSIGPGFTGSDSFRKVRMHVYNINKITRIYNVVGTIRGSVEPDRYVILGGHRDSWVFGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYELVDSKIIPFNIQDYAEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNFSEAASDFHKRLIQVDLNNPIAVRMMNDQLMLLERAFIDPLGLPGKLFYRHIIFAPSSHNKYAGESFPGIYDAIFDIENKANSRLAWKEVKKHISIAAFTIQAAAGTLKEVL", "length": 740 }, "evidence": [ { "id": "F1STP2", "url": "https://omabrowser.org/oma/group/F1STP2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" }, { "name": "apical plasma membrane", "id": "GO:0016324", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016324", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" }, { "name": "carboxypeptidase activity", "id": "GO:0004180", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004180", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" }, { "name": "metallocarboxypeptidase activity", "id": "GO:0004181", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004181", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" }, { "name": "dipeptidase activity", "id": "GO:0016805", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016805", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" }, { "name": "aminopeptidase activity", "id": "GO:0004177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004177", "evidence": [ { "database": "UniProtKB", "id": "F1STP2", "url": "https://www.uniprot.org/uniprotkb/F1STP2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 111, "end_pos": 113, "annotation": "n_glycosylation_sequon" }, { "start_pos": 185, "end_pos": 187, "annotation": "n_glycosylation_sequon" }, { "start_pos": 449, "end_pos": 451, "annotation": "n_glycosylation_sequon" }, { "start_pos": 535, "end_pos": 537, "annotation": "n_glycosylation_sequon" }, { "start_pos": 628, "end_pos": 630, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-5693783", "name": "NAALADases hydrolyse NAAG", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "plasma membrane", "input_participant_list": [ "R-ALL-5693762" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5693783", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5693783" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-5693762", "participant_name": "NAAG [cytosol]", "crossref": [ { "id": "76931", "database": "ChEBI", "url": "" }, { "id": "ZINC000001532510", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1STP2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 740, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1STP2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1STP2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2" }, { "id": "PF02225", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02225" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PA", "eco_id": "ECO_0000259", "start_pos": 162, "end_pos": 250, "start_aa": "Gly", "end_aa": "Asn", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2" }, { "id": "PF04389", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04389" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase M28", "eco_id": "ECO_0000259", "start_pos": 347, "end_pos": 550, "start_aa": "Asn", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1STP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STP2" }, { "id": "PF04253", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04253" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Transferrin receptor-like dimerisation", "eco_id": "ECO_0000259", "start_pos": 617, "end_pos": 737, "start_aa": "Val", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 379 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 111, "end_pos": 113 }, { "start_pos": 185, "end_pos": 187 }, { "start_pos": 449, "end_pos": 451 }, { "start_pos": 535, "end_pos": 537 }, { "start_pos": 628, "end_pos": 630 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F6Q2U8-1", "uniprot_ac": "F6Q2U8", "uniprot_id": "F6Q2U8_PIG", "mass": { "chemical_mass": 74381.0, "monoisotopic_mass": 74381.0 }, "refseq": {}, "gene_names": [ { "name": "ZFP64", "type": "recommended", "evidence": [ { "id": "F6Q2U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8" } ] } ], "protein_names": [ { "name": "ZFP64 zinc finger protein", "type": "synonym", "evidence": [ { "id": "F6Q2U8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F6Q2U8", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZFP64", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8", "locus": { "chromosome": "17", "start_pos": 53426541, "end_pos": 53460095, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000058830", "url": "https://www.ensembl.org/id/ENSSSCG00000058830" } ] } } ], "crossref": [ { "id": "F6Q2U8", "url": "https://alphafold.ebi.ac.uk/entry/F6Q2U8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007481", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007481", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050688", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050688", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24379:SF121", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24379:SF121", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24403", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24403", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24403:SF108", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24403:SF108", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12874", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12874", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13909", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13909", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R3A6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3A6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3A6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3A6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F6Q2U8", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F6Q2U8-1", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNASSEGESFPGSVQIPGGTTVLVELTPDIHICGICKQQFNNLDAFVAHKQSGCQLTSTSGATPSTVQFVSEETVPATQTQTTTRTITSETQTITVSAPEFVFEHGYQTYLPTESNENQTATVISLPAKSRAKKPTAPPAQKRLNCCYPGCQFKTAYGMKDMERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHTRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDAPFQCWLCSAKFKISSDLKRHMRVHSGEKPFKCEFCNVRCTMKGNLKSHIRIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMVKTEALERKDAGRQSSRQVAKLDAKKTFHCDRCDASFMREDSLRSHKRQHSEYSENKSSDVTVLQFQIDPSKQPAAPLAVGHLQVPLQPSQVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVQPALVAQNPEEPGNSRLQILRQVNLIAPPQTSGCPSEAAAMPQPAVLLTTHDQPDGATLHQTLIPTAPGGPQEGSGNQAFITSSGITCTDFEGLNALIQEGTTEVTVVSDGGQNIAVATTAPPIFSTSQQELPKQTYSIIQGGAHPALLCPADSIPD", "length": 679, "header": "tr|F6Q2U8-1|F6Q2U8_PIG Isoform 1 of ZFP64 zinc finger protein OS=Sus scrofa OX=9823 GN=ZFP64 PE=3 SV=1 CANONICAL=F6Q2U8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R3A6-1", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8/entry#A0A5G2R3A6-1", "sequence": { "sequence": "MNASSEGESFPGSVQIPGGTTVLVELTPDIHICGICKQQFNNLDAFVAHKQSGCQLTSTSGATPSTVQFVSEETVPATQTQTTTRTITSETQTITGCQFKTAYGMKDMERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHTRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDAPFQCWLCSAKFKISSDLKRHMRVHSGEKPFKCEFCNVRCTMKGNLKSHIRIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMVKTEALERKDAGRQSSRQVAKLDAKKTFHCDRCDASFMREDSLRSHKRQHSEYSENKSSDVTVLQFQIDPSKQPAAPLAVGHLQVPLQPSQVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVQPALVAQNPEEPGNSRLQILRQVNLIAPPQTSGCPSEAAAMPQPAVLLTTHDQPDGATLHQTLIPTAPGGPQEGSGNQAFITSSGITCTDFEGLNALIQEGTTEVTVVSDGGQNIAVATTAPPIFSTSQQELPKQTYSIIQGGAHPALLCPADSIPD", "length": 625, "header": "tr|A0A5G2R3A6-1|F6Q2U8_PIG Computationally mapped isoform of ZFP64 zinc finger protein OS=Sus scrofa OX=9823 GN=ZFP64 PE=3 SV=1 CANONICAL=F6Q2U8-1" }, "locus": { "chromosome": "17", "start_pos": 53459444, "end_pos": 53426544, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088650.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088650.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071575.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071575.1" } ] } }, { "isoform_ac": "F6Q2U8-1", "url": "https://www.uniprot.org/uniprotkb/F6Q2U8/entry#F6Q2U8-1", "sequence": { "sequence": "MNASSEGESFPGSVQIPGGTTVLVELTPDIHICGICKQQFNNLDAFVAHKQSGCQLTSTSGATPSTVQFVSEETVPATQTQTTTRTITSETQTITVSAPEFVFEHGYQTYLPTESNENQTATVISLPAKSRAKKPTAPPAQKRLNCCYPGCQFKTAYGMKDMERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHTRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDAPFQCWLCSAKFKISSDLKRHMRVHSGEKPFKCEFCNVRCTMKGNLKSHIRIKHSGNNFKCPHCDFLGDSKATLRKHSRVHQSEHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMVKTEALERKDAGRQSSRQVAKLDAKKTFHCDRCDASFMREDSLRSHKRQHSEYSENKSSDVTVLQFQIDPSKQPAAPLAVGHLQVPLQPSQVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVQPALVAQNPEEPGNSRLQILRQVNLIAPPQTSGCPSEAAAMPQPAVLLTTHDQPDGATLHQTLIPTAPGGPQEGSGNQAFITSSGITCTDFEGLNALIQEGTTEVTVVSDGGQNIAVATTAPPIFSTSQQELPKQTYSIIQGGAHPALLCPADSIPD", "length": 679, "header": "tr|F6Q2U8-1|F6Q2U8_PIG Isoform 1 of ZFP64 zinc finger protein OS=Sus scrofa OX=9823 GN=ZFP64 PE=3 SV=1 CANONICAL=F6Q2U8-1" }, "locus": { "chromosome": "17", "start_pos": 53459444, "end_pos": 53426544, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": 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Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3U9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3U9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Cajal body", "id": "GO:0015030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015030", "evidence": [ { "database": "UniProtKB", "id": "I3L632", "url": "https://www.uniprot.org/uniprotkb/I3L632" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "I3L632", "url": "https://www.uniprot.org/uniprotkb/I3L632" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 230, "end_pos": 232, "annotation": "n_glycosylation_sequon" }, { "start_pos": 325, "end_pos": 327, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L632-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 339, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L632-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L632" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 230, "end_pos": 232 }, { "start_pos": 325, "end_pos": 327 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L5T2-1", "uniprot_ac": "I3L5T2", "uniprot_id": "I3L5T2_PIG", "mass": { "chemical_mass": 77392.0, "monoisotopic_mass": 77392.0 }, "refseq": { "ac": "XP_003359023", "name": "ubiquitin-associated and SH3 domain-containing protein A isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359023" }, "gene_names": [ { "name": "UBASH3A", "type": "recommended", "evidence": [ { "id": "I3L5T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" } ] }, { "name": "UBASH3A", "type": "synonym", "evidence": [ { "id": "XP_003359023", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359023" } ] } ], "protein_names": [ { "name": "Ubiquitin-associated and SH3 domain-containing protein A", "type": "recommended", "evidence": [ { "id": "I3L5T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5T2/entry#names_and_taxonomy" } ] }, { "name": "Suppressor of T-cell receptor signaling 2", "type": "synonym", "evidence": [ { "id": "I3L5T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5T2/entry#names_and_taxonomy" } ] }, { "name": "T-cell ubiquitin ligand 1", "type": "synonym", "evidence": [ { "id": "I3L5T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5T2/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin-associated and SH3 domain-containing protein A isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003359023", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359023" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L5T2", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UBASH3A", "url": "https://www.uniprot.org/uniprotkb/I3L5T2", "locus": { "chromosome": "13", "start_pos": 205787056, "end_pos": 205744393, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029511", "url": "https://www.ensembl.org/id/ENSSSCG00000029511" } ] } } ], "crossref": [ { "id": "I3L5T2", "url": "https://alphafold.ebi.ac.uk/entry/I3L5T2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000029511", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029511", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07067", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07067", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14300", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14300", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100627915", "url": "https://www.ncbi.nlm.nih.gov/gene/100627915", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001452", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001452", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013078", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013078", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015940", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015940", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029033", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029033", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051710", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051710", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627915", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627915", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AFNWKHI", "url": "https://omabrowser.org/oma/group/AFNWKHI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L5T2", "url": "https://www.orthodb.org/?gene=I3L5T2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16469", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16469", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16469:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16469:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00300", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00300", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14604", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14604", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22562", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22562", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003359023", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003359023", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R3W7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3W7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R3W7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3W7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5T2", "url": "https://www.uniprot.org/uniprotkb/I3L5T2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5T2-1", "url": "https://www.uniprot.org/uniprotkb/I3L5T2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWKGRHTHTLQREFCKRVSRANRILAFVRQITKGLRFLFSASGSLPLPLRLYLLRSVCGQEEMAAGETQLYAKVTSKLKGRSSSALLEPLLDMGFPAHTALKALAATGRKTVEEASDWLRCHCNDPSLDDPIPQEYALFLCPTGPLLDKLQEFWRESKRQCAKNRAHEVFPHITLCDFFTCEDQKVECLYEALKRAGDRSLGTFPAAVPLVLHSSVSYLGFFVDDGPADIIREFAVMFATEASVLADCTVKPCTKQLHLTLAHKFYPHHQRTLEQLARAVHPGHSCQWTAALYSRDMRFVHYQTLRVLFQYKPQNVDELTLSLGDYIFVDPTQQEEASEGWVIGISQRTGCRGFLPENYTERASECDTWVKHRTYTFSRALDPGSRKDEASSRRNGEPHAPHMSRSASSLQSLQASILRRGVLVVRHGERVDQVFGKSWLQQCSTPDGKYYRPDLNFPRGLPRRSNGIKDFESDPPLSSCGIFQSRMAGEALLESGTSITSVFTSPALRCVQTAKHILEELKLEKKVKIRVEPGIFEWTKWEAGKTTPTLMTLEELKEANFNVSMDYRPAFPLASLLPAESYNDYVHRCAVSMEQIVSTCSQDGGVTLIVGHGSALDSCTRPLLRLPPRDCADFGRLVRKIPFLGMCFCEENKEEGKWELVNPPVKTLTHGSNPAFNWRHWVQDN", "length": 685, "header": "tr|I3L5T2-1|I3L5T2_PIG Isoform 1 of Ubiquitin-associated and SH3 domain-containing protein A OS=Sus scrofa OX=9823 GN=UBASH3A PE=4 SV=2 CANONICAL=I3L5T2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R3W7-1", "url": "https://www.uniprot.org/uniprotkb/I3L5T2/entry#A0A5G2R3W7-1", "sequence": { "sequence": "MWKGRHTHTLQREFCKRVSRANRILAFVRQITKGLRFLFSASGSLPLPLRLYLLRSVCGQEEMAAGETQLYAKVTSKLKGRSSSALLEPLLDMGFPAHTALKALAATGRKTVEEASDWLRCHCNDPSLDDPIPQEYALFLCPTGPLLDKLQEFWRESKRQCAKNRAHEVFPHITLCDFFTCEDQKVECLYEALKRAGDRSLGTFPAAVPLVLHSSVSYLGFFVDDGPADIIREFAVMFATEASVLADCTVKPCTKQLHLTLAHKFYPHHQRTLEQLARAVHPGHSCQWTAALYSRDMRFVHYQTLRVLFQYKPQNVDELTLSLGDYIFVDPTQQEEASEGWVIGISQRTGCRGFLPENYTERASECDTWVKHRTYTFSRALDPGSRKDEASSRRNGEPHAPHMSRSASSLQSLQASILRRGVLVVRHGERVDQVFGKSWLQQCSTPDGKYYRPDLNFPRGLPRRSNGIKDFESDPPLSSCGIFQSRMAGEALLESGTSITSVFTSPALRCVQTAKHILEELKLEKKVKIRVEPGIFEWTKWEAGKTTPTLMTLEELKEANFNVSMDYRSPFWACASAKKTKRKGSGSW", "length": 588, "header": "tr|A0A5G2R3W7-1|I3L5T2_PIG Computationally mapped isoform of Ubiquitin-associated and SH3 domain-containing protein A OS=Sus scrofa OX=9823 GN=UBASH3A PE=4 SV=2 CANONICAL=I3L5T2-1" }, "locus": { "chromosome": "13", "start_pos": 205785904, "end_pos": 205744475, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084344.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084344.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065246.2", "url": "https://www.ensembl.org/id/ENSSSCP00000065246.2" } ] } }, { "isoform_ac": "I3L5T2-1", "url": "https://www.uniprot.org/uniprotkb/I3L5T2/entry#I3L5T2-1", "sequence": { "sequence": "MWKGRHTHTLQREFCKRVSRANRILAFVRQITKGLRFLFSASGSLPLPLRLYLLRSVCGQEEMAAGETQLYAKVTSKLKGRSSSALLEPLLDMGFPAHTALKALAATGRKTVEEASDWLRCHCNDPSLDDPIPQEYALFLCPTGPLLDKLQEFWRESKRQCAKNRAHEVFPHITLCDFFTCEDQKVECLYEALKRAGDRSLGTFPAAVPLVLHSSVSYLGFFVDDGPADIIREFAVMFATEASVLADCTVKPCTKQLHLTLAHKFYPHHQRTLEQLARAVHPGHSCQWTAALYSRDMRFVHYQTLRVLFQYKPQNVDELTLSLGDYIFVDPTQQEEASEGWVIGISQRTGCRGFLPENYTERASECDTWVKHRTYTFSRALDPGSRKDEASSRRNGEPHAPHMSRSASSLQSLQASILRRGVLVVRHGERVDQVFGKSWLQQCSTPDGKYYRPDLNFPRGLPRRSNGIKDFESDPPLSSCGIFQSRMAGEALLESGTSITSVFTSPALRCVQTAKHILEELKLEKKVKIRVEPGIFEWTKWEAGKTTPTLMTLEELKEANFNVSMDYRPAFPLASLLPAESYNDYVHRCAVSMEQIVSTCSQDGGVTLIVGHGSALDSCTRPLLRLPPRDCADFGRLVRKIPFLGMCFCEENKEEGKWELVNPPVKTLTHGSNPAFNWRHWVQDN", "length": 685, "header": "tr|I3L5T2-1|I3L5T2_PIG Isoform 1 of Ubiquitin-associated and SH3 domain-containing protein A OS=Sus scrofa OX=9823 GN=UBASH3A PE=4 SV=2 CANONICAL=I3L5T2-1" }, "locus": { "chromosome": "13", "start_pos": 205785978, "end_pos": 205744475, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027287.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027287.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019382.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019382.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R3W7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R3W7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627915", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627915", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y3K5-1", "protein_name": "Ubiquitin-associated and SH3 domain-containing protein A", "gene_name": "UBASH3A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAVAETQLYAKVSNKHRSKSPSVLLESLLAKGFPAHIAQKALVATGQKSVEDAAKWLHSHCNDPSLDDPIPQEYALYLCPTGHLYNCLQEFWKESKRQCGKNRAHEIFPHITLCDFFTCEDQKVELLYDILKRICNSFAQRFPPTISLSLHSSTSYLGFFVGDSDANVLKEFAVAFSSEASALADCHVKPCLKQLHLTLAHKFCPHHQKTLEQLAKYINPEETCHWVAALYSRDMRFVHYQTLRALFQYKPQNIDELMINAGDFIYVNPTQQSEVSEGWVIGTSHQTGCRGFLPENYTERANESDTWVKHREYAFVPASKFSTQSTNEPNVKLNEEFRNPVMSRSVTDVLSLQLSQNTSLRRGVLVMRHGERVDQVFGKSWLQQCLTANGKYYRADLNFPSSLPKRKDSVKHFEHDPPLSSCGVFQSRLIGEALLDQEVTVSYVYSSPALRCIQTAQHVLQGLKLDQKVKIRVEPGLFEWTKWEASKAIPNFMTLTELTEASYNIDTSYRGNIPLSSLVPSESYEEYVSRSSAVIKEIVTACPSKGVILIVGHGSSLASFTRPLIGLPARDSNDFAQVVRKIPSLGMCFCEELKEEKKWLMVNPPVKTLTHGANAAFNWRNSIMED", "length": 626 }, "evidence": [ { "id": "I3L5T2", "url": "https://omabrowser.org/oma/group/I3L5T2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0L9L6-1", "protein_name": "Ubiquitin-associated and SH3 domain-containing protein A", "gene_name": "Ubash3a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSALASSPPVSRRLVYGKQEGMAAGETQLYAKVSNKLKGRSTSSLLDPLLALGFPTHTALKALAATGMKTAEEAADWLHGHCSDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESRRQCAKNKAHEVFPHVTLCDFFTCEDQKVECLYEALRRAGDRILGSFPALVPLVLHSSISYLGFFINDSPADVIRDFAMAFATEASALADCTIKPCTKQLHLTLAHKFYPHHQRTLEQLARAIQPSHTCQWTAALYSRDMRFVHYQTLKALFQYKPQNADELMLSPGDYIFVDPTQQEEASEGWAIGISHRTGCRGFLPENYTERANEADTWVKHRTYTFSLAMDLNSRKEFEASSRRNGDSHTPSVSRSISDIQALQATIARRGVLVIRHGERVDQVFGKSWLHQCTTTDGKYYRPDLNFPRSLPRRSNGIKDFENDPPLSSCGIFQARLAGEALLDSGVRVTAVFASPALRCVQTAKHILEELKLERRLKIKVEPGIFEWMKWEAGKATLTFLTLEELKEADFNVDLDYRPAFPCCSLLPAESYDQYVERCAVSMGQIINTCPQDMGITLIVSHSSALDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENKEDGKWDLVNPPVKTLTHGANSVFNWRNWISSN", "length": 645 }, "evidence": [ { "id": "I3L5T2", "url": "https://omabrowser.org/oma/group/I3L5T2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HLD8-1", "protein_name": "Ubiquitin-associated and SH3 domain-containing protein A", "gene_name": "Ubash3a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAGETQLYAKVSNKLKGRNTSLLLDPLLTMGFPAHIALKALAATGRKTAEEAADWLHGHCSDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCEDQKVECLYEALRRAGDRILNSFPTLVPLVLHSSISYLGFFINDSPADVIREFATAFATEASVLADCTVKPCTKQLHLTLAHKFYPHHQRTLEQLARAIQPSHTCQWTAALYSRDMRFVHYQTLKALFQYKPQNADELMLSRGDYIFVDPTQQEEASEGWAIGISHRTGCRGFLPENYTERANEADTWVKHRTYTFSLAMDLNSRKDGEASSRRNGEFHTPSVSRNISSIQALQATIMRRGVLVVRHGERVDQVFGKSWLQQCTTTDGKYYRPDLNFPHSLPKRSNGIKDFENDPPLSSCGIFQARLAGEALLDSGIRVTAVFVSPALRCVQTAKHILEELKLEKKLKIRVEPGVFEWMKWEAGKATPTFLTLEELKEANFNVDPDYRPAFPRCSLMPAESYDQYVERCAVSMGQIITTCPQDMGITLIVSHSSALDSCTRPLLRLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVNPPVKTLTHGANSAFNWKNWISSN", "length": 624 }, "evidence": [ { "id": "I3L5T2", "url": "https://omabrowser.org/oma/group/I3L5T2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P57075-1", "protein_name": "Ubiquitin-associated and SH3 domain-containing protein A", "gene_name": "UBASH3A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGETQLYAKVSNKLKSRSSPSLLEPLLAMGFPVHTALKALAATGRKTAEEALAWLHDHCNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESKRQCAKNRAHEVFPHVTLCDFFTCEDQKVECLYEALKRAGDRLLGSFPTAVPLALHSSISYLGFFVSGSPADVIREFAMTFATEASLLAGTSVSRFWIFSQVPGHGPNLRLSNLTRASFVSHYILQKYCSVKPCTKQLHLTLAHKFYPHHQRTLEQLARAIPLGHSCQWTAALYSRDMRFVHYQTLRALFQYKPQNVDELTLSPGDYIFVDPTQQDEASEGWVIGISQRTGCRGFLPENYTDRASESDTWVKHRMYTFSLATDLNSRKDGEASSRCSGEFLPQTARSLSSLQALQATVARKSVLVVRHGERVDQIFGKAWLQQCSTPDGKYYRPDLNFPCSLPRRSRGIKDFENDPPLSSCGIFQSRIAGDALLDSGIRISSVFASPALRCVQTAKLILEELKLEKKIKIRVEPGIFEWTKWEAGKTTPTLMSLEELKEANFNIDTDYRPAFPLSALMPAESYQEYMDRCTASMVQIVNTCPQDTGVILIVSHGSTLDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENKEEGKWELVNPPVKTLTHGANAAFNWRNWISGN", "length": 661 }, "evidence": [ { "id": "I3L5T2", "url": "https://omabrowser.org/oma/group/I3L5T2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q3V3E1-1", "protein_name": "Ubiquitin-associated and SH3 domain-containing protein A", "gene_name": "Ubash3a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAGETQLYAKVSNKLKGRSTPSLLDPLLAMGFPTHTALKALAATGRKTAEAAADWLHGHCNDPSLDDPIPQEYALFLCPTGPLLEKLQEFWRESRRQCAKNRAHEVFPHVTLCDFFTCEDQKVECLYEALRRAGDRILGSFPTLVPLVLHSSISYLGFFINDSPADAIREFAMAFATEAAVLADCTIKPCTKQLHLTLAHKFYPHHQRTLEQLAKAIQPSHSCQWTAALYSRDMRFVHYQTLKALFQYKPQNADELMLSAGDYIFVDPTQQEEASEGWAIGISHRTGCRGFLPENYTERANEADTWVKHRTYTFNLAMDLNSRKDFEASCRGNGEPHTPSMSKSVSSIQALQATISRRGILVVRHGERVDQVFGKSWLQQCTTADGKYYRPDLNFPRSLPRRSNGIKDFENDPPLSSCGIFQARLAGEALLDSGVRVTAVFASPALRCVQTAKHILEELKLEKKLKIRVEPGIFEWMKWEASKATLTFLTLEELKEANFNVDLDYRPALPRCSLMPAESYDQYVERCAVSMGQIINTCPQDMGITLIVSHSSALDSCTRPLLGLPPRECGDFAQLVRKIPSLGMCFCEENREDGKWDLVNPPVKTLTHGANSVFNWRNWISSN", "length": 624 }, "evidence": [ { "id": "I3L5T2", "url": "https://omabrowser.org/oma/group/I3L5T2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L5T2", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3L5T2", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3L5T2", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "I3L5T2", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of T cell receptor signaling pathway", "id": "GO:0050860", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050860", "evidence": [ { "database": "UniProtKB", "id": "I3L5T2", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 358, "end_pos": 360, "annotation": "n_glycosylation_sequon" }, { "start_pos": 562, "end_pos": 564, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L5T2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 685, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L5T2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L5T2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L5T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" }, { "id": "PS50002", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50002" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH3", "eco_id": "ECO_0000259", "start_pos": 300, "end_pos": 365, "start_aa": "Val", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L5T2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5T2" }, { "id": "PS50030", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50030" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UBA", "eco_id": "ECO_0000259", "start_pos": 81, "end_pos": 122, "start_aa": "Arg", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 358, "end_pos": 360 }, { "start_pos": 562, "end_pos": 564 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L7N5-1", "uniprot_ac": "I3L7N5", "uniprot_id": "I3L7N5_PIG", "mass": { "chemical_mass": 82247.0, "monoisotopic_mass": 82247.0 }, "refseq": { "ac": "XP_005659192", "name": "coiled-coil domain-containing protein 170 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659192" }, "gene_names": [ { "name": "CCDC170", "type": "recommended", "evidence": [ { "id": "I3L7N5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7N5" } ] }, { "name": "CCDC170", "type": "synonym", "evidence": [ { "id": "XP_005659192", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659192" } ] } ], "protein_names": [ { "name": "Coiled-coil domain containing 170", "type": "synonym", "evidence": [ { "id": "I3L7N5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7N5/entry#names_and_taxonomy" } ] }, { "name": "coiled-coil domain-containing protein 170 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005659192", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659192" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L7N5", "url": "https://www.uniprot.org/uniprotkb/I3L7N5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC170", "url": "https://www.uniprot.org/uniprotkb/I3L7N5", "locus": { "chromosome": "1", "start_pos": 14657359, "end_pos": 14751051, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004087", "url": "https://www.ensembl.org/id/ENSSSCG00000004087" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004087", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004087", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100516653", "url": "https://www.ncbi.nlm.nih.gov/gene/100516653", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR039139", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039139", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100516653", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516653", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EQRTHNY", "url": "https://omabrowser.org/oma/group/EQRTHNY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L7N5", "url": "https://www.orthodb.org/?gene=I3L7N5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR18863", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18863", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR18863:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR18863:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_005659192", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659192", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1S7W4", "url": "https://www.uniprot.org/uniprotkb/F1S7W4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S7W4-1", "url": "https://www.uniprot.org/uniprotkb/F1S7W4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7N5", "url": "https://www.uniprot.org/uniprotkb/I3L7N5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7N5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7N5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSSGPRRLQPIGPAAFGASPPAPEETYDRLLEVPVTREQLNHYRNVAETARSELAATLVKFESAQAELRDLQSKMRSKEVSCQELKAEMENYKESNARKASLLISLRDRVQELEEESVVLSTSKIRTEIAAHSAVKENQELKKNFVELDEKLQKCLKDNEENKKQVLQSCRKHEKFLAALRDSLDPEKKNEKASDEDLILKVGELCKENALVKGQIVALEETVSVHEMEAEASRETIVRLASEVNREQKKAASCTEEKDKLNQDLLTAVEAKEALEKEVKILQERLLAGQRVWDASKQELSLLKKSSLELEKSCKASLDAAAASQSQYSSFREKIAAHLRGGSGPLKPTEDAILERIREMGSQEESGKQMVTQLEAQISELVEQLGNESGFHQKALQRAQKAENKLETLQGQLTHLEGELVSGDVLRDTLHVEKQKYLQFLDQLSEKMKLDRMAAELGFDMRLEVVLARTEQLVRLESNAVIEHKTIAHNLQRKLKTQKERLESKELHVNLLRQKIAQLEEERQMRSALTVERDEAKVTIRKLQKQVERLQKELSLCRQMNTELKAKLADTNELKIKTLEQTKTIEDLNKSRDTLEKMKEKAEKKLLSVKSELDTAEHEAKENKERAKNMLEVVTSETKTLKKSLEEAEKREKQLVDFREVVSQMLGLNMSSLALPDYEIIKCLERLIHSHQHPFVTCACLKDVPTRQDRHLQGHLQLLH", "length": 721, "header": "tr|I3L7N5-1|I3L7N5_PIG Isoform 1 of Coiled-coil domain containing 170 OS=Sus scrofa OX=9823 GN=CCDC170 PE=4 SV=2 CANONICAL=I3L7N5-1" }, "isoforms": [ { "isoform_ac": "F1S7W4-1", "url": "https://www.uniprot.org/uniprotkb/I3L7N5/entry#F1S7W4-1", "sequence": { "sequence": "MSSSGPRRLQPIGPAAFGASPPAPEETYDRLLEVPVTREQLNHYRNVAETARSELAATLVKFESAQAELRDLQSKMRSKEVSCQELKAEMENYKESNARKASLLISLRDRVQELEEESVVLSTSKIRTEIAAHSAVKENQELKKNFVELDEKLQKCLKDNEENKKQVLQSCRKHEKFLAALRDSLDPEKKNEKASDEDLILKVGELCKENALVKGQIVALEETVSVHEMEAEASRETIVRLASEVNREQKKAASCTEEKDKLNQDLLTAVEAKEALEKEVKILQERLLAGQRVWDASKQELSLLKKSSLELEKSCKASLDAAAASQSQYSSFREKIAAHLRGGSGPLKPTEDAILERIREMGSQEESGKQYLQFLDQLSEKMKLDRMAAELGFDMRLEVVLARTEQLVRLESNAVIEHKTIAHNLQRKLKTQKERLESKELHVNLLRQKIAQLEEERQMRSALTVERDEAKVTIRKLQKQVERLQKELSLCRQMNTELKAKLADTNELKIKTLEQTKTIEDLNKSRDTLEKMKEKAEKKLLSVKSELDTAEHEAKENKERAKNMLEVVTSETKTLKKSLEEAEKREKQLVDFREVVSQMLGLNMSSLALPDYEIIKCLERLIHSHQHPFVTCACLKDVPTRQDRHLQGHLQLLH", "length": 654, "header": "tr|F1S7W4-1|I3L7N5_PIG Computationally mapped isoform of Coiled-coil domain containing 170 OS=Sus scrofa OX=9823 GN=CCDC170 PE=4 SV=3 CANONICAL=I3L7N5-1" }, "locus": { "chromosome": "1", "start_pos": 14750770, "end_pos": 14659700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004518.3", "url": "https://www.ensembl.org/id/ENSSSCT00000004518.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000004416.3", "url": "https://www.ensembl.org/id/ENSSSCP00000004416.3" } ] } }, { "isoform_ac": "I3L7N5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7N5/entry#I3L7N5-1", "sequence": { "sequence": "MSSSGPRRLQPIGPAAFGASPPAPEETYDRLLEVPVTREQLNHYRNVAETARSELAATLVKFESAQAELRDLQSKMRSKEVSCQELKAEMENYKESNARKASLLISLRDRVQELEEESVVLSTSKIRTEIAAHSAVKENQELKKNFVELDEKLQKCLKDNEENKKQVLQSCRKHEKFLAALRDSLDPEKKNEKASDEDLILKVGELCKENALVKGQIVALEETVSVHEMEAEASRETIVRLASEVNREQKKAASCTEEKDKLNQDLLTAVEAKEALEKEVKILQERLLAGQRVWDASKQELSLLKKSSLELEKSCKASLDAAAASQSQYSSFREKIAAHLRGGSGPLKPTEDAILERIREMGSQEESGKQMVTQLEAQISELVEQLGNESGFHQKALQRAQKAENKLETLQGQLTHLEGELVSGDVLRDTLHVEKQKYLQFLDQLSEKMKLDRMAAELGFDMRLEVVLARTEQLVRLESNAVIEHKTIAHNLQRKLKTQKERLESKELHVNLLRQKIAQLEEERQMRSALTVERDEAKVTIRKLQKQVERLQKELSLCRQMNTELKAKLADTNELKIKTLEQTKTIEDLNKSRDTLEKMKEKAEKKLLSVKSELDTAEHEAKENKERAKNMLEVVTSETKTLKKSLEEAEKREKQLVDFREVVSQMLGLNMSSLALPDYEIIKCLERLIHSHQHPFVTCACLKDVPTRQDRHLQGHLQLLH", "length": 721, "header": "tr|I3L7N5-1|I3L7N5_PIG Isoform 1 of Coiled-coil domain containing 170 OS=Sus scrofa OX=9823 GN=CCDC170 PE=4 SV=2 CANONICAL=I3L7N5-1" }, "locus": { "chromosome": "1", "start_pos": 14750770, "end_pos": 14659700, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030322.2", "url": "https://www.ensembl.org/id/ENSSSCT00000030322.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020041.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020041.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1S7W4", "url": "https://www.uniprot.org/uniprotkb/F1S7W4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516653", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516653", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MPS2-1", "protein_name": "Coiled-coil domain-containing protein 170 isoform X1", "gene_name": "Ccdc170", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSHSSSSGSGSLERPSNASPPEETANHPMEFPGTWEQLNHYRNVAENVQSELAATLVKFECAQSELRDLRSKLLSKEVCCQELKAEVESYKENSARKSSLLISLRSRIQELQEESAALSASKIRTETSAHTTMKENQELMKKVLELDEKLQNCLKENEESKKQGLENLRRHEEFRTELCDCLSLDKKHEEASNEDLILKLRELCKENTLLKGQIVTLEETINVHEMEAKANRETISRLAAEVSREQTRAASWAMEKDKLNQDLLSAVDARTALEREAKLFQERLLVAQRAWDASKQELNQLRKNCQHLDLSLKASRDAAATSQSQNSSFREKLTVLLCNGLDMAVPTEDAILERIRELGIQEESKTRMVSQLEAQISELVEQLGNEAELHRKDLQRAQEAESKLEALQGQLSHLEGELLSGDVLRDNLNLEKQKYLQFLDQLSEKMKLGEIADDLGFDMRLDVVLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKEVHMNLLRQKIAQLQQETQARTALAVERDEAHLTVRKLEKKVERMQKELSACREYNTELKAQLADTNELKIKTLEQTKVIEDLSKSRDNLEKLKEKAEKKLMLLKSKLDTAEEEAKADKGRMTAIMELVTSELETLKKSLEEAERREQQLVEFREVVSQTLGLNLTSLAVPDYEIIKCLERVVHSHHHHLVTCACLKDTSAEHDSCPKCCLELLH", "length": 718 }, "evidence": [ { "id": "I3L7N5", "url": "https://omabrowser.org/oma/group/I3L7N5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9S743-1", "protein_name": "Coiled-coil domain containing 170", "gene_name": "CCDC170", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLSKEVSYQELKAEMESYKENNARKSSLLISLRDRVQELEEESAALATSKIRTEITAQSAIKENQELKKKVVELDEKLQKCLKENEENKNQVSQNCRKHEEFLAQLRDCLDPEKNEKASDEDLILKLGELCKENAFVKGQIVALEETINVHEMEAKASRETIMRLASEVNREQKKAASYIEEKGQLSQDLLGAMEAKEALEREVKVFQERLLAGQRVWDASKQELSLLKRSSLELEKSLKASLEATAASQTELSSFREKIAALLRGSSGTLRPSEDAILERIREMGSQEESGKQMVSQLEAQISKLVEQLGNESQFHQKALQRAQKAENQLEALQGRLTHLEEELVSGGVLQDDLHFEKQKYLKFLDQLSEKMKLDQMAAELGFDMRLDVVLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMNFLRQKIAHLEQEKQVRSAVMVERDEANVTIRKLQKKVERLQKELSVCQELNTELKAKLADTSELKIKTLEQTRAIEDLNKSRDKLEKMKEKAEKKLLSVKSELETTEHEAKENKERARNMLEVVTSEMKTLKKSLEEAGKRERQLMDFREVVSQMLGLNMMSLALPDYEIIKCLERLIHAHQHRFVPCACLKDETAKQDRPPQGHVQLLH", "length": 645 }, "evidence": [ { "id": "I3L7N5", "url": "https://omabrowser.org/oma/group/I3L7N5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0LHN4-1", "protein_name": "Coiled-coil domain containing 170", "gene_name": "Ccdc170", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHSSSLGSGSPECPRNASPPEGTADHHPEVPVTREQLNHYRNVAENVQSELAAALVRFECAQSELRELRSKMLSKEVCCQELKAEMESYKENSARKSSLLVSLRGRIQELQEESAAFSASKIRAEASAHAMMKENQELMKKVLELDEKLQDCSKANEESKKQGSETLRRHEEFRTQLRDCLSLDKKCEEAPDEDLVLKLKELCKENTSLKGQLTTLEETVSVHEMEAKANRETILRLAADVSREQTKAASWAEEKDKLNQDLLSAAEARTALEREAMLYQERLLASQRAWDASKQELNQLRKSCQQLDVSLKASREAATASQSQNACFREKLAALLCSRFDIAESTEDAILEKIRVLGIEEENQKRMASQLEAQISELVGKLGNESESHQKALQRAHEAEKKLEALQGQLSHLEGELLSGDVVRDNLNLEKQKYLKFLDQLSEKMKLGHIAADLGFDMRLDVVLARIEQLVHLESNAVIENKTMAHNLQRKLKTQKERLESKEVHMNLLRQKITQLQQEKEARSALAMERDEAHLSVRKLEKKVERMQKELSSCQEYNTELKAKLADTSELKIKTLEQTKAIEDLNQSRGELEKMKENAEKKLMLVMSELETTVQEAQANQERTRAMIELASSELRILKKSLDEAERREQQLADFREVVSSMLGLNVTSLALPDYEIIKCLERLIHSHHHHHHHHHFVPCACLKDMAAEQASPHSAT", "length": 718 }, "evidence": [ { "id": "I3L7N5", "url": "https://omabrowser.org/oma/group/I3L7N5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3YXL0-1", "protein_name": "Coiled-coil domain containing 170", "gene_name": "Ccdc170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSHSSSLGSGSPECPCNSSPPEGTASHRPEVPDTWEQLNHYRNVTENVQSELAAMLVKFECAQSELRELRSKMLSKEACCQELKVEMESYKESSARKSALLTSLRGRMEELQEESAAVSASKSRAEASVHAMMKENQELMKKVLELDEKLQNCSKENEESKKQGSEHLRRHEEFRAQLHDCLSLDKKHEEASDEDLILKLRELYKEPTFLKGQLATLEETVTVHEMEAKANRETIRRLAAEVSREQTKAASWAEEKDKLNQDLLSAVEGRTALEREVKLYQERLLASQRAWDASKQELTQLRKRCQELDVSLKASREATTASQSRNSCFREKLTALLCSRFDTAESTEDAILERIRELGIEEESQRRMASQLEAQISEFVGKLGNESESHQKALQRAHVAEKKLEALQSQLSHLEGELLSGDVVRDNLFLEKQKYLKFLDQLTEKMKLGHVAADLGFDVCLDVVLARIEQLVRLESNAVIENKTMAHNLQRKLKTQKERLESKEVHMNLLRQKIAQLQQEKEARSALAVERDEAHLAMRKLEKKLERMQKELSACQEHNTELKAKLADTNELKIKTLEQTKAIEDLNQSRDELEKMKENAEKKLMLVMSELENTEQEARAHQERSRAMIELASLELKTLRKSLDEAERRGMQLADFREVVSSMLGLNMTSHDPPDYEIIKCLERLLHSHRHHHHHHFVPCACLQDMAAEQGSCSHCRVEIPH", "length": 722 }, "evidence": [ { "id": "I3L7N5", "url": "https://omabrowser.org/oma/group/I3L7N5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E7F1G2-1", "protein_name": "Coiled-coil domain-containing protein 170", "gene_name": "ccdc170", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMDESVIQQHLSHYKQATETAREELAALQAKHNSLQTQLSESQSRVVSQEETLRSLKDAVDRYKEKEARQESLIGSLRERNYNTEQEMISITSTRSIMDIRIQTLTKENQEIKEKIMQLEVESKQYVAECNKAKQEAAEAQRKCEEFISTLANKISVIATGKADPMDYIVSVVDACFKDRERLKNCVCALEESVKLYEVECKASRETVKRLATDVDREQTLSASRANELNSSRQELDLISLRKVSLERENQSAKVSLQEAEAALASAQQLCRHYENLSQDLQNKLQISQNEAKASHRHHGAFMKKVETLLDDHSLPGQHTEQDMLSALTDLCKRETSAQKSQMEMEVRLAEMVEQLSSIKEHQNTSEQKKQELLDRIQSLEDELINARVCKDGMNQDKQQYLRFVEQLSEMLKVDDVAAELGFDMRLEVILTRAQQLSRHEGTALLETKTQTYSLQRKLKEQKSRSESKDLYLELLRRKVQQLEEEKRSRSTLALEKDDAALSCKKLQKRVDRLQAELSTLRFSNTELKAQLSHTNQLQITVMEQKQTIEEQNKNLGKLEKKKVKTEQKLTSVTSELKSQELKARDEIQQAHRLLDTQSSAIADLTHTEKQLLDFYTVVSQMLGVHCTGCIPNYEVLRRLEVLIQSRQCHSTAHLHTCWNSPVSSINVDQSHEFKPQALPAASSPTASLINPH", "length": 693 }, "evidence": [ { "id": "I3L7N5", "url": "https://omabrowser.org/oma/group/I3L7N5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "M9NDT0-1", "protein_name": "Coiled-coil domain-containing protein 170", "gene_name": "CG15165", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPLNPRPTTNGNTPEDWQVFEVLFGADQDPKTIPARMTTMSPLPQPAIPFCQLDTSCSNTGITVTEHHHGLDLTTTLRSELAALSYKKERLTGELAEARAALCSKDADIENLRAQAARQTALIGSLQSRLQNSESREQAVQARCDSTIQTVQREKRSSDERNKELICKIQHLETHMASEESQKEQIKAQLHDLLRRLSITLGMDVCDGNQNSHATPECIISRAEEVMVELQRTKAKVSSTCDTLSSCENELLNLKSLANIEKQRLTAQLDGAGNHNHELEGRCRQYERDLQIQRDRLTESEINGEKLKEELRGFESRCHRLQNNLDRTQGDRLQFLRGLSNLLNVPEPCETLIKDKLREILAENQAMHAQMHSLRDQLNSEHEKLKETQQTTECRLRSGEAQKCELTERLEKCHAEIHTLRKDHMGLSEFLQRLALAMNWGECSAPPALGTDTNLMAENLLERAERLAAHCDHEAPHHHHHHHSPDKGCCDHGHGHGKLRRERSCHDIPLKESSSVYNLQRRVRVLREQVQRRDLHLELLRRKLAIIEDGARGKCMLQGERDEAVCRAKKAAKQVDKLSAQLADARSQIAEVKAQLAEAVEYKITSLERARKIDELTTQICDLEDEKTRLLSQLNALKERLKSSCESNQNRRCRDEALINSMRDDVSRLSSQLSDANQRLSHLQSFRTSVARTLHLRDLPETDLLHRLQALCSAHQEFTMLSKRYETASPVGDHPCPRFDDPIPPSSHCRPPRELSPPPTSFHHKATIHSGSSHHSPPSEHHHGSSSHVHNHHGHGHGHGHSSHSRRQRSKSRDKRLHDECFDTDVHRLHHGCKEELLATGSEDDYDFKSKYC", "length": 853 }, "evidence": [ { "id": "I3L7N5", "url": "https://omabrowser.org/oma/group/I3L7N5/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q8IYT3-1", "protein_name": "Coiled-coil domain-containing protein 170", "gene_name": "CCDC170", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLDCTSHIALGAASPAPEETYDHLSEVPVTREQLNHYRNVAQNARSELAATLVKFECAQSELQDLRSKMLSKEVSCQELKAEMESYKENNARKSSLLTSLRDRVQELEEESAALSTSKIRTEITAHAAIKENQELKKKVVELNEKLQKCSKENEENKKQVSKNCRKHEEFLTQLRDCLDPDERNDKASDEDLILKLRDLRKENEFVKGQIVILEETINVHEMEAKASRETIMRLASEVNREQKKAASCTEEKEKLNQDLLSAVEAKEALEREVKIFQERLLAGQQVWDASKQEVSLLKKSSSELEKSLKASQDAVTTSQSQYFSFREKIAALLRGRLSMTGSTEDTILEKIREMDSREESRDRMVSQLEAQISELVEQLGKESGFHQKALQRAQKAENMLETLQGQLTHLEAELVSGGVLRDNLNFEKQKYLKFLDQLSQKMKLDQMAAELGFDMRLDVVLARTEQLVRLESNAVIENKTIAHNLQRKLKTQKERLESKELHMSLLRQKIAQLEEEKQARTALVVERDNAHLTIRNLQKKVERLQKELNTCRDLHTELKAKLADTNELKIKTLEQTKAIEDLNKSRDQLEKMKEKAEKKLMSVKSELDTTEHEAKENKERARNMIEVVTSEMKTLKKSLEEAEKREKQLADFREVVSQMLGLNVTSLALPDYEIIKCLERLVHSHQHHFVTCACLKDVTTGQERHPQGHLQLLH", "length": 715 }, "evidence": [ { "id": "I3L7N5", "url": "https://omabrowser.org/oma/group/I3L7N5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3L7N5", "url": "https://www.uniprot.org/uniprotkb/I3L7N5" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "I3L7N5", "url": "https://www.uniprot.org/uniprotkb/I3L7N5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "I3L7N5", "url": "https://www.uniprot.org/uniprotkb/I3L7N5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "microtubule cytoskeleton organization", "id": "GO:0000226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000226", "evidence": [ { "database": "UniProtKB", "id": "I3L7N5", "url": "https://www.uniprot.org/uniprotkb/I3L7N5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 388, "end_pos": 390, "annotation": "n_glycosylation_sequon" }, { "start_pos": 590, "end_pos": 592, "annotation": "n_glycosylation_sequon" }, { "start_pos": 670, "end_pos": 672, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 388, "end_pos": 390 }, { "start_pos": 590, "end_pos": 592 }, { "start_pos": 670, "end_pos": 672 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L5H9-1", "uniprot_ac": "I3L5H9", "uniprot_id": "I3L5H9_PIG", "mass": { "chemical_mass": 149758.0, "monoisotopic_mass": 149758.0 }, "refseq": { "ac": "XP_005666369", "name": "pleckstrin homology domain-containing family G member 3 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666369" }, "gene_names": [ { "name": "PLEKHG3", "type": "recommended", "evidence": [ { "id": "I3L5H9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5H9" } ] }, { "name": "PLEKHG3", "type": "synonym", "evidence": [ { "id": "XP_005666369", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666369" } ] } ], "protein_names": [ { "name": "Pleckstrin homology and RhoGEF domain containing G3", "type": "synonym", "evidence": [ { "id": "I3L5H9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5H9/entry#names_and_taxonomy" } ] }, { "name": "pleckstrin homology domain-containing family G member 3 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005666369", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666369" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L5H9", "url": "https://www.uniprot.org/uniprotkb/I3L5H9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLEKHG3", "url": "https://www.uniprot.org/uniprotkb/I3L5H9", "locus": { "chromosome": "7", "start_pos": 88810994, "end_pos": 88764471, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000002276", "url": "https://www.ensembl.org/id/ENSSSCG00000002276" } ] } } ], "crossref": [ { "id": "ENSSSCG00000002276", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000002276", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00160", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00160", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13243", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13243", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100155870", "url": "https://www.ncbi.nlm.nih.gov/gene/100155870", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000219", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000219", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035899", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035899", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055251", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055251", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100155870", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155870", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "PCVEDLM", "url": "https://omabrowser.org/oma/group/PCVEDLM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L5H9", "url": "https://www.orthodb.org/?gene=I3L5H9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45924", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45924", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45924:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45924:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00621", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00621", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22697", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22697", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8980692", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013406", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013406", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013408", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013408", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005666369", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005666369", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AFV8", "url": "https://www.uniprot.org/uniprotkb/A0A287AFV8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AFV8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AFV8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BMJ4", "url": "https://www.uniprot.org/uniprotkb/A0A287BMJ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BMJ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BMJ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRE7", "url": "https://www.uniprot.org/uniprotkb/A0A287BRE7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRE7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BRE7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA61", "url": "https://www.uniprot.org/uniprotkb/F1SA61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SA61-1", "url": "https://www.uniprot.org/uniprotkb/F1SA61-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5H9", "url": "https://www.uniprot.org/uniprotkb/I3L5H9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5H9-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPVSTSLRQDGSQERPVSLTSTTSSSGSSRDSHGAMEEPSGSETSAENGAGSPRARRHPNSNNNSSSWRNMRGSLSPFNSRASVAPAHKLSYLGRVVREIVETERTYVQDLRSIVEDYLLKIIDTPGLLNPEQVSALFGNIESIYALNSQLLRDLDSCNSDPVAVASCFVERSQEFDIYTQYCNNYPNSVAALTECMQDKQQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFDEEEDGFEVVEDAIDTMTCVAWYINDMKRRHEHAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRSEKTFFLFDKALLVTKKRGDHFVYKGHIPCSSLMLIESTRESLCFTVTHYKHSKQQYNIQAKTVEEKRSWTHHIKRLILENHHTTIPQKAKEAILEMDSYYPNRYRHSPERLKKASQDEVSGHMHQGRRQSEPGQPLFSRATLPSGRRGFVMPGLKGRRKSEPSRHLLRQLSEKARAAGMKHAGSVGTLLDFGQPPRAGGLPSEAEGAAREEQEEEEEEEVVEEEEEEQAFQVSLEDLAGHEGSEKGARPEPPGSEEEEEEEEESLAVAEQVADFASSLLAALHCWHYRANALLFSRGAMGKGRRESEDPKSYRRPSSRSPTTAEKFLSFESVSSLPEVEPDPESGTEQEVFAAMEGPSTEEMASDTEAPEVLEMQLDAHQLLLGLDPPGDIVDFMVAESTEDPKALSSEEEEEIGATHEPESLLPPSVLDQASVIAERFVSSFSRRSSLALEDGKSSGFGTPRLTSRSSSVLSLEDSEKGPAPCVSTTDSLDSQLPPEANISAGVASESEPSVNGTEPPSPGCPAEPDRSSGKKESKLSSRDRQLLDKIKSYYENAEHHDAGFSVRRRESLSFIPKGLVRNSVSRINSLPRPDPEPMAQLRHKRQVGSRAASWALFDHPGPGQTGAGDPAPITDAEFRPSSEIVKIWEGMEAPKGSPGKGPGQGQANGFDLHEPLFILEEHELGAITEESAAISPESASPTEPPSAAHLARELKELVKELSSGTQGELVTPLHPRILQLSHVMDSHVSERVKNKVYQLARQYSLRIKSKSVTARPPLQWEKVASTNPQLQEEAGAPLGGKGKRKPVLSLFNHEQPVVQELSPPKPSSARETSPRRFSFSPSASSPKTTSPGAWPLPRSPLSPFDTETFHWPDVRELCSKYASHDEVLQTKGSRPHSLPVNRSRSLPENMVEPPPSGRVGRCGSLNTRRSPAGPEAAEPQPPRGSPPSRLAEEETLYVTADLILEDNRRVIVMEKGPLPGPAAGLEAAGGQGLSSPAALVGQGQEFQESAACRSKDESPRDPVDPSQLGRVRSLREKFQALNSTG", "length": 1359, "header": "tr|I3L5H9-1|I3L5H9_PIG Isoform 1 of Pleckstrin homology and RhoGEF domain containing G3 OS=Sus scrofa OX=9823 GN=PLEKHG3 PE=4 SV=2 CANONICAL=I3L5H9-1" }, "isoforms": [ { "isoform_ac": "A0A287AFV8-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H9/entry#A0A287AFV8-1", "sequence": { "sequence": "MLKDGRGHFGGILKGTGIGCAGMNGEGVGIWLEDLPAVITSSNLPGASPPGSDARMPVSTSLRQDGSQERPVSLTSTTSSSGSSRDSHGAMEEPSGSETSAENGAGSPRARRHPNSNNNSSSWRNMRGSLSPFNSRASVAPAHKLSYLGRVVREIVETERTYVQDLRSIVEDYLLKIIDTPGLLNPEQVSALFGNIESIYALNSQLLRDLDSCNSDPVAVASCFVERSQEFDIYTQYCNNYPNSVAALTECMQDKQQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFDEEEDGFEVVEDAIDTMTCVAWYINDMKRRHEHAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRSEKTFFLFDKALLVTKKRGDHFVYKGHIPCSSLMLIESTRESLCFTVTHYKHSKQQYNIQAKTVEEKRSWTHHIKRLILENHHTTIPQKAKEAILEMDSYYPNRYRHSPERLKKASQDEVSGHMHQGRRQSEPSRHLLRQLSEKARAAGMKGKGRRESEDPKSYRRPSSRSPTTAEKFLSFESVSSLPEVEPDPESGTEQEVFAAMEGPSTEEMASDTEAPEVLEMQLDAHQLLLGLDPPGDIVDFMVAESTEDPKALSSEEEEEIGATHEPESLLPPSVLDQASVIAERFVSSFSRRSSLALEDGKSSGFGTPRLTSRSSSVLSLEDSEKGPAPCVSTTDSLDSQLPPEANISAGVASESEPSVNGTEPPSPGCPAEPDRSSGKKESKLSSRDRQLLDKIKSYYENAEHHDAGFSVRRRESLSFIPKGLVRNSVSRINSLPRPDPEPMAQLRHKRQVGSRAASWALFDHPGPGQTGAGDPAPITDAEFRPSSEIVKIWEGMEAPKGSPGKGPGQGQANGFDLHEPLFILEEHELGAITEESAAISPESASPTEPPSAAHLARELKELVKELSSGTQGELVTPLHPRILQLSHVMDSHVSERVKNKVYQLARQYSLRIKSKSVTARPPLQWEKVASTNPQLQEEAGAPLGGKGKRKPVLSLFNHEQPVVQELSPPKPSSARETSPRRFSFSPSASSPKTTSPGAWPLPRSPLSPFDTETFHWPDVRELCSKYASHDEVLQTKGSRPHSLPVNRSRSLPENMVEPPPSGRVGRCGSLNTRRSPAGPEAAEPQPPRGSPPSRLAEEETLYVTADLILEDNRRVIVMEKGPLPGPAAGLEAAGGQGLSSPAALVGQGQEFQESAACRSKDESPRDPVDPSQLGRVRSLREKFQALNSTG", "length": 1265, "header": "tr|A0A287AFV8-1|A0A287AFV8_PIG Computationally mapped isoform of Pleckstrin homology and RhoGEF domain containing G3 OS=Sus scrofa OX=9823 GN=PLEKHG3 PE=4 SV=3 CANONICAL=I3L5H9-1" }, "locus": { "chromosome": "7", "start_pos": 88810343, "end_pos": 88790316, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039299.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039299.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042730.3", "url": "https://www.ensembl.org/id/ENSSSCP00000042730.3" } ] } }, { "isoform_ac": "A0A287BMJ4-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H9/entry#A0A287BMJ4-1", "sequence": { "sequence": "MPVSTSLRQDGSQERPVSLTSTTSSSGSSRDSHGAMEEPSGSETSAENGAGSPRARRHPNSNNNSSSWRNMRGSLSPFNSRASVAPAHKLSYLGRVVREIVETERTYVQDLRSIVEDYLLKIIDTPGLLNPEQVSALFGNIESIYALNSQLLRDLDSCNSDPVAVASCFVERSQEFDIYTQYCNNYPNSVAALTECMQDKQQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFDEEEDGFEVVEDAIDTMTCVAWYINDMKRRHEHAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRSEKTFFLFDKALLVTKKRGDHFVYKGHIPCSSLMLIESTRESLCFTVTHYKHSKQQYNIQAKTVEEKRSWTHHIKRLILENHHTTIPQKAKEAILEMDSYYPNRYRHSPERLKKASQDEVSGHMHQGRRQSEPSRHLLRQLSEKARAAGMKHAGSVGTLLDFGQPPRAGGLPSEAEGAAREEQEEEEEEEVVEEEEEEQAFQVSLEDLAGHEGSEKGARPEPPGSEEEEEEEEESLAVAEQVADFASSLLAALHCWHYRANALLFSRGAMGKGRRESEDPKSYRRPSSRSPTTAEKFLSFESVSSLPEVEPDPESGTEQEVFAAMEGPSTEEMASDTEAPEVLEMQLDAHQLLLGLDPPGDIVDFMVAESTEDPKALSSEEEEEIGATHEPESLLPPSVLDQASVIAERFVSSFSRRSSLALEDGKSSGFGTPRLTSRSSSVLSLEDSEKGPAPCVSTTDSLDSQLPPEANISAGVASESEPSVNGTEPPSPGCPAEPDRSSGKKESKLSSRDRQLLDKIKSYYENAEHHDAGFSVRRRESLSFIPKGLVRNSVSRINSLPRPDPEPMAQLRHKRQVGSRAASWALFDHPGPGQTGAGDPAPITDAEFRPSSEIVKIWEGMEAPKGSPGKGPGQGQANGFDLHEPLFILEEHELGAITEESAAISPESASPTEPPSAAHLARELKELVKELSSGTQGELVTPLHPRILQLSHVMDSHVSERVKNKVYQLARQYSLRIKSKSVTARPPLQWEKVASTNPQLQEEAGAPLGGKGKRKPVLSLFNHEQPVVQELSPPKPSSARETSPRRFSFSPSASSPKTTSPGAWPLPRSPLSPFDTETFHWPDVRELCSKYASHDEVLQTKGSRPHSLPVNRSRSLPENMVEPPPSGRVGRCGSLNTRRSPAGPEAAEPQPPRGSPPSRLAEEETLYVTADLILEDNRRVIVMEKGPLPGPAAGLEAAGGQGLSSPAALVGQGQEFQESAACRSKDESPRDPVDPSQLGRVRSLREKFQALNSTG", "length": 1329, "header": "tr|A0A287BMJ4-1|A0A287BMJ4_PIG Computationally mapped isoform of Pleckstrin homology and RhoGEF domain containing G3 OS=Sus scrofa OX=9823 GN=PLEKHG3 PE=4 SV=2 CANONICAL=I3L5H9-1" }, "locus": { "chromosome": "7", "start_pos": 88810343, "end_pos": 88794490, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039052.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039052.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057719.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057719.2" } ] } }, { "isoform_ac": "A0A287BRE7-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H9/entry#A0A287BRE7-1", "sequence": { "sequence": "MPVSTSLRQDGSQERPVSLTSTTSSSGSSRDSHGAMEEPSGSETSAENGAGSPRARRHPNSNNNSSSWRNMRGSLSPFNSRASVAPAHKLSYLGRVVREIVETERTYVQDLRSIVESQEFDIYTQYCNNYPNSVAALTECMQDKQQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFDEEEDGFEVVEDAIDTMTCVAWYINDMKRRHEHAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRSEKTFFLFDKALLVTKKRGDHFVYKGHIPCSSLMLIESTRESLCFTVTHYKHSKQQYNIQAKTVEEKRSWTHHIKRLILENHHTTIPQKAKEAILEMDSYYPNRYRHSPERLKKASQDEVSGHMHQGRRQSEPSRHLLRQLSEKARAAGMKGKGRRESEDPKSYRRPSSRSPTTAEKFLSFESVSSLPEVEPDPESGTEQEVFAAMEGPSTEEMASDTEAPEVLEMQLDAHQLLLGLDPPGDIVDFMVAESTEDPKALSSEEEEEIGATHEPESLLPPSVLDQASVIAERFVSSFSRRSSLALEDGKSSGFGTPRLTSRSSSVLSLEDSEKGPAPCVSTTDSLDSQLPPEANISAGVASESEPSVNGTEPPSPGCPAEPDRSSGKKESKLSSRDRQLLDKIKSYYENAEHHDAGFSVRRRESLSFIPKGLVRNSVSRINSLPRPDPEPMAQLRHKRQVGSRAASWALFDHPGPGQTGAGDPAPITDAEFRPSSEIVKIWEGMEAPKGSPGKGPGQGQANGFDLHEPLFILEEHELGAITEESAAISPESASPTEPPSAAHLARELKELVKELSSGTQGELVTPLHPRILQLSHVMDSHVSERVKNKVYQLARQYSLRIKSKSVTARPPLQWEKVASTNPQLQEEAGAPLGGKGKRKPVLSLFNHEQPVVQELSPPKPSSARETSPRRFSFSPSASSPKTTSPGAWPLPRSPLSPFDTETFHWPDVRELCSKYASHDEVLQTKGSRPHSLPVNRSRSLPENMVEPPPSGRVGRCGSLNTRRSPAGPEAAEPQPPRGSPPSRLAEEETLYVTADLILEDNRRVIVMEKGPLPGPAAGLEAAGGQGLSSPAALVGQGQEFQESAACRSKDESPRDPVDPSQLGRVRSLREKFQALNSTG", "length": 1154, "header": "tr|A0A287BRE7-1|A0A287BRE7_PIG Computationally mapped isoform of Pleckstrin homology and RhoGEF domain containing G3 OS=Sus scrofa OX=9823 GN=PLEKHG3 PE=4 SV=2 CANONICAL=I3L5H9-1" }, "locus": { "chromosome": "7", "start_pos": 88810343, "end_pos": 88794490, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048600.2", "url": "https://www.ensembl.org/id/ENSSSCT00000048600.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059211.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059211.2" } ] } }, { "isoform_ac": "F1SA61-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H9/entry#F1SA61-1", "sequence": { "sequence": "MGALLRKANLPGASPPGSDARMPVSTSLRQDGSQERPVSLTSTTSSSGSSRDSHGAMEEPSGSETSAENGAGSPRARRHPNSNNNSSSWRNMRGSLSPFNSRASVAPAHKLSYLGRVVREIVETERTYVQDLRSIVEDYLLKIIDTPGLLNPEQVSALFGNIESIYALNSQLLRDLDSCNSDPVAVASCFVERSQEFDIYTQYCNNYPNSVAALTECMQDKQQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFDEEEDGFEVVEDAIDTMTCVAWYINDMKRRHEHAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRSEKTFFLFDKALLVTKKRGDHFVYKGHIPCSSLMLIESTRESLCFTVTHYKHSKQQYNIQAKTVEEKRSWTHHIKRLILENHHTTIPQKAKEAILEMDSYYPNRYRHSPERLKKASQDEVSGHMHQGRRQSEPSRHLLRQLSEKARAAGMKGKGRRESEDPKSYRRPSSRSPTTAEKFLSFESVSSLPEVEPDPESGTEQEVFAAMEGPSTEEMASDTEAPEVLEMQLDAHQLLLGLDPPGDIVDFMVAESTEDPKALSSEEEEEIGATHEPESLLPPSVLDQASVIAERFVSSFSRRSSLALEDGKSSGFGTPRLTSRSSSVLSLEDSEKGPAPCVSTTDSLDSQLPPEANISAGVASESEPSVNGTEPPSPGCPAEPDRSSGKKESKLSSRDRQLLDKIKSYYENAEHHDAGFSVRRRESLSFIPKGLVRNSVSRINSLPRPDPEPMAQLRHKRQVGSRAASWALFDHPGPGQTGAGDPAPITDAEFRPSSEIVKIWEGMEAPKGSPGKGPGQGQANGFDLHEPLFILEEHELGAITEESAAISPESASPTEPPSAAHLARELKELVKELSSGTQGELVTPLHPRILQLSHVMDSHVSERVKNKVYQLARQYSLRIKSKSVTARPPLQWEKVASTNPQLQEEAGAPLGGKGKRKPVLSLFNHEQPVVQELSPPKPSSARETSPRRFSFSPSASSPKTTSPGAWPLPRSPLSPFDTETFHWPDVRELCSKYASHDEVLQTKGSRPHSLPVNRSRSLPENMVEPPPSGRVGRCGSLNTRRSPAGPEAAEPQPPRGSPPSRLAEEETLYVTADLILEDNRRVIVMEKGPLPGPAAGLEAAGGQGLSSPAALVGQGQEFQESAACRSKDESPRDPVDPSQLGRVRSLREKFQALNSTG", "length": 1231, "header": "tr|F1SA61-1|I3L5H9_PIG Computationally mapped isoform of Pleckstrin homology and RhoGEF domain containing G3 OS=Sus scrofa OX=9823 GN=PLEKHG3 PE=4 SV=5 CANONICAL=I3L5H9-1" }, "locus": { "chromosome": "7", "start_pos": 88810343, "end_pos": 88782455, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000002534.5", "url": "https://www.ensembl.org/id/ENSSSCT00000002534.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000002470.5", "url": "https://www.ensembl.org/id/ENSSSCP00000002470.5" } ] } }, { "isoform_ac": "I3L5H9-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H9/entry#I3L5H9-1", "sequence": { "sequence": "MPVSTSLRQDGSQERPVSLTSTTSSSGSSRDSHGAMEEPSGSETSAENGAGSPRARRHPNSNNNSSSWRNMRGSLSPFNSRASVAPAHKLSYLGRVVREIVETERTYVQDLRSIVEDYLLKIIDTPGLLNPEQVSALFGNIESIYALNSQLLRDLDSCNSDPVAVASCFVERSQEFDIYTQYCNNYPNSVAALTECMQDKQQAKFFRDRQELLQHSLPLGSYLLKPVQRILKYHLLLQEIAKHFDEEEDGFEVVEDAIDTMTCVAWYINDMKRRHEHAVRLQEIQSLLINWKGPDLTTYGELVLEGTFRVHRVRSEKTFFLFDKALLVTKKRGDHFVYKGHIPCSSLMLIESTRESLCFTVTHYKHSKQQYNIQAKTVEEKRSWTHHIKRLILENHHTTIPQKAKEAILEMDSYYPNRYRHSPERLKKASQDEVSGHMHQGRRQSEPGQPLFSRATLPSGRRGFVMPGLKGRRKSEPSRHLLRQLSEKARAAGMKHAGSVGTLLDFGQPPRAGGLPSEAEGAAREEQEEEEEEEVVEEEEEEQAFQVSLEDLAGHEGSEKGARPEPPGSEEEEEEEEESLAVAEQVADFASSLLAALHCWHYRANALLFSRGAMGKGRRESEDPKSYRRPSSRSPTTAEKFLSFESVSSLPEVEPDPESGTEQEVFAAMEGPSTEEMASDTEAPEVLEMQLDAHQLLLGLDPPGDIVDFMVAESTEDPKALSSEEEEEIGATHEPESLLPPSVLDQASVIAERFVSSFSRRSSLALEDGKSSGFGTPRLTSRSSSVLSLEDSEKGPAPCVSTTDSLDSQLPPEANISAGVASESEPSVNGTEPPSPGCPAEPDRSSGKKESKLSSRDRQLLDKIKSYYENAEHHDAGFSVRRRESLSFIPKGLVRNSVSRINSLPRPDPEPMAQLRHKRQVGSRAASWALFDHPGPGQTGAGDPAPITDAEFRPSSEIVKIWEGMEAPKGSPGKGPGQGQANGFDLHEPLFILEEHELGAITEESAAISPESASPTEPPSAAHLARELKELVKELSSGTQGELVTPLHPRILQLSHVMDSHVSERVKNKVYQLARQYSLRIKSKSVTARPPLQWEKVASTNPQLQEEAGAPLGGKGKRKPVLSLFNHEQPVVQELSPPKPSSARETSPRRFSFSPSASSPKTTSPGAWPLPRSPLSPFDTETFHWPDVRELCSKYASHDEVLQTKGSRPHSLPVNRSRSLPENMVEPPPSGRVGRCGSLNTRRSPAGPEAAEPQPPRGSPPSRLAEEETLYVTADLILEDNRRVIVMEKGPLPGPAAGLEAAGGQGLSSPAALVGQGQEFQESAACRSKDESPRDPVDPSQLGRVRSLREKFQALNSTG", "length": 1359, "header": "tr|I3L5H9-1|I3L5H9_PIG Isoform 1 of Pleckstrin homology and RhoGEF domain containing G3 OS=Sus scrofa OX=9823 GN=PLEKHG3 PE=4 SV=2 CANONICAL=I3L5H9-1" }, "locus": { "chromosome": "7", "start_pos": 88810343, "end_pos": 88794490, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032357.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032357.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019278.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019278.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SA61", "url": "https://www.uniprot.org/uniprotkb/F1SA61" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155870", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155870", "resource": "KEGG Pathway" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": 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"length": 1232, "header": "tr|A0A5G2R9T9-1|A0A5G2R9T9_PIG Computationally mapped isoform of Tetratricopeptide repeat domain 21A OS=Sus scrofa OX=9823 GN=TTC21A PE=3 SV=1 CANONICAL=I3L7W7-1" }, "locus": { "chromosome": "13", "start_pos": 23829995, "end_pos": 23797689, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078419.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078419.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073826.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073826.1" } ] } }, { "isoform_ac": "F1SJS4-1", "url": "https://www.uniprot.org/uniprotkb/I3L7W7/entry#F1SJS4-1", "sequence": { "sequence": 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"length": 1271, "header": "tr|F1SJS4-1|I3L7W7_PIG Computationally mapped isoform of Tetratricopeptide repeat domain 21A OS=Sus scrofa OX=9823 GN=TTC21A PE=3 SV=4 CANONICAL=I3L7W7-1" }, "locus": { "chromosome": "13", "start_pos": 23830210, "end_pos": 23797689, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012331.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012331.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012009.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012009.4" } ] } }, { "isoform_ac": "I3L7W7-1", "url": "https://www.uniprot.org/uniprotkb/I3L7W7/entry#I3L7W7-1", "sequence": { "sequence": 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"length": 1275, "header": "tr|I3L7W7-1|I3L7W7_PIG Isoform 1 of Tetratricopeptide repeat domain 21A OS=Sus scrofa OX=9823 GN=TTC21A PE=3 SV=2 CANONICAL=I3L7W7-1" }, "locus": { "chromosome": "13", "start_pos": 23830210, "end_pos": 23797689, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022750.2", "url": "https://www.ensembl.org/id/ENSSSCT00000022750.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020125.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020125.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SJS4", "url": "https://www.uniprot.org/uniprotkb/F1SJS4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "I3L7W7", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" } ], "pmid": "" }, { "name": "intraciliary transport particle A", "id": "GO:0030991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030991", "evidence": [ { "database": "UniProtKB", "id": "I3L7W7", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "flagellated sperm motility", "id": "GO:0030317", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030317", "evidence": [ { "database": "UniProtKB", "id": "I3L7W7", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" } ], "pmid": "" }, { "name": "spermatid development", "id": "GO:0007286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007286", "evidence": [ { "database": "UniProtKB", "id": "I3L7W7", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" } ], "pmid": "" }, { "name": "protein localization to cilium", "id": "GO:0061512", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061512", "evidence": [ { "database": "UniProtKB", "id": "I3L7W7", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" } ], "pmid": "" }, { "name": "intraciliary retrograde transport", "id": "GO:0035721", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035721", "evidence": [ { "database": "UniProtKB", "id": "I3L7W7", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1186, "end_pos": 1188, "annotation": "n_glycosylation_sequon" }, { "start_pos": 195, "end_pos": 197, "annotation": "n_glycosylation_sequon" }, { "start_pos": 264, "end_pos": 266, "annotation": "n_glycosylation_sequon" }, { "start_pos": 4, "end_pos": 6, "annotation": "n_glycosylation_sequon" }, { "start_pos": 575, "end_pos": 577, "annotation": "n_glycosylation_sequon" }, { "start_pos": 677, "end_pos": 679, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L7W7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1275, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L7W7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L7W7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L7W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" }, { "id": "PF25063", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25063" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tetratricopeptide repeat protein 21A/21B C-terminal ARM", "eco_id": "ECO_0000259", "start_pos": 1062, "end_pos": 1270, "start_aa": "Thr", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L7W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" }, { "id": "PF25062", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25062" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tetratricopeptide repeat protein 21A/21B N-terminal ARM repeat", "eco_id": "ECO_0000259", "start_pos": 12, "end_pos": 234, "start_aa": "Ile", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L7W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" }, { "id": "PF25064", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25064" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tetratricopeptide repeat protein 21A/21B fifth ARM repeats", "eco_id": "ECO_0000259", "start_pos": 912, "end_pos": 1028, "start_aa": "Glu", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L7W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7W7" }, { "id": "PF25068", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25068" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tetratricopeptide repeat protein 21A/21B fourth ARM", "eco_id": "ECO_0000259", "start_pos": 734, "end_pos": 871, "start_aa": "Gln", "end_aa": "Leu", 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"total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMT6-1", "uniprot_ac": "F1SMT6", "uniprot_id": "F1SMT6_PIG", "mass": { "chemical_mass": 88294.0, "monoisotopic_mass": 88294.0 }, "refseq": {}, "gene_names": [ { "name": "ECEL1", "type": "recommended", "evidence": [ { "id": "F1SMT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ] } ], "protein_names": [ { "name": "Endothelin converting enzyme like 1", "type": "synonym", "evidence": [ { "id": "F1SMT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMT6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ECEL1", "url": "https://www.uniprot.org/uniprotkb/F1SMT6", "locus": { "chromosome": "15", "start_pos": 132988657, "end_pos": 132997825, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016285", "url": "https://www.ensembl.org/id/ENSSSCG00000016285" } ] } } ], "crossref": [ { "id": "F1SMT6", "url": "https://alphafold.ebi.ac.uk/entry/F1SMT6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016285", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016285", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08662", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08662", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000718", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000718", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008753", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008753", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018497", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018497", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024079", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024079", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042089", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042089", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11733", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11733", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11733:SF195", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11733:SF195", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01431", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01431", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF05649", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05649", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2RFZ3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFZ3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMT6-1", "url": "https://www.uniprot.org/uniprotkb/F1SMT6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "METPYSMTAHYDEFQEVKYVSRCGAGGTRGTSLPPGFPLGAARSATGTRAGLPRWNRREVCLLSGLVFAAGLCAILAAMLALKYLGPGAAGGATCSEGCPERKAFARAARFLAANLDASIDPCQDFYSFACGGWLRRHAIPDDKLTYGTIAAIGEQNEERLRRLLARPGGGPGGAAQRKVRAFFRSCLDMREIERLGPRPMLEVIEDCGGWDLGGAAARPGAAARWDLNRLLYKAQGVYSAAALFSLTVSLDDRNSSRYVIRIDQDGLTLPERTLYLAQDEESEKILAAYRVFMERLLSLLGAEAVEQKAQEILQLEQRLANITVSEYDDLRRDVSSMYNKVTLGQLQKITPHLRWKWLLDQIFQEDFSEDEELVLLATDYMQQVSQLIRSTPRRILHNYLVWRVVVVLSEHLSPPFREALHELAREMEGSDKPQELARVCLGQANRHFGMALGALFVHEHFSAASKAKVQQLVEDIKYILGQRLEELDWMDAETKAAARAKLQYMMVMVGYPDFLLKPEAVDKEYEFEVHEKTYFKNILNSIRFSIQLSVKKIRREVDKSTWLLPPQALNAYYLPNKNQMVFPAGILQPTLYDPDFPQSLNYGGIGTIIGHELTHGYDDWGGQYDRSGNLLHWWTEASYSRFLRKAECIVHLYDNFTVYNQRVNGKHTLGENIADMGGLKLAYYAYQKWVREHGPEHPLHRLKYTHNQLFFIAFAQVCPNWCIKRRSQSIYLQVLTDKHAPEHYRVLGSVSQFEEFGRAFHCPRDSPMNPAHKCSVW", "length": 778, "header": "tr|F1SMT6-1|F1SMT6_PIG Isoform 1 of Endothelin converting enzyme like 1 OS=Sus scrofa OX=9823 GN=ECEL1 PE=4 SV=2 CANONICAL=F1SMT6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RFZ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMT6/entry#A0A5G2RFZ3-1", "sequence": { "sequence": "METPYSMTAHYDEFQEVKYVSRCGAGGTRGTSLPPGFPLGAARSATGTRAGLPRWNRREVCLLSGLVFAAGLCAILAAMLALKYLGPGAAGGATCSEGCPERKAFARAARFLAANLDASIDPCQDFYSFACGGWLRRHAIPDDKLTYGTIAAIGEQNEERLRRLLARPGGGPGGAAQRKVRAFFRSCLDMREIERLGPRPMLEVIEDCGGWDLGGAAARPGAAARWDLNRLLYKAQGVYSAAALFSLTVSLDDRNSSRYVIRIDQDGLTLPERTLYLAQDEESEKVWEHGLVAAGPDLPGGLLRG", "length": 305, "header": "tr|A0A5G2RFZ3-1|A0A5G2RFZ3_PIG Computationally mapped isoform of Endothelin converting enzyme like 1 OS=Sus scrofa OX=9823 GN=ECEL1 PE=4 SV=2 CANONICAL=F1SMT6-1" }, "locus": { "chromosome": "15", "start_pos": 132996310, "end_pos": 132994208, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077159.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077159.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073822.2", "url": "https://www.ensembl.org/id/ENSSSCP00000073822.2" } ] } }, { "isoform_ac": "F1SMT6-1", "url": "https://www.uniprot.org/uniprotkb/F1SMT6/entry#F1SMT6-1", "sequence": { "sequence": "METPYSMTAHYDEFQEVKYVSRCGAGGTRGTSLPPGFPLGAARSATGTRAGLPRWNRREVCLLSGLVFAAGLCAILAAMLALKYLGPGAAGGATCSEGCPERKAFARAARFLAANLDASIDPCQDFYSFACGGWLRRHAIPDDKLTYGTIAAIGEQNEERLRRLLARPGGGPGGAAQRKVRAFFRSCLDMREIERLGPRPMLEVIEDCGGWDLGGAAARPGAAARWDLNRLLYKAQGVYSAAALFSLTVSLDDRNSSRYVIRIDQDGLTLPERTLYLAQDEESEKILAAYRVFMERLLSLLGAEAVEQKAQEILQLEQRLANITVSEYDDLRRDVSSMYNKVTLGQLQKITPHLRWKWLLDQIFQEDFSEDEELVLLATDYMQQVSQLIRSTPRRILHNYLVWRVVVVLSEHLSPPFREALHELAREMEGSDKPQELARVCLGQANRHFGMALGALFVHEHFSAASKAKVQQLVEDIKYILGQRLEELDWMDAETKAAARAKLQYMMVMVGYPDFLLKPEAVDKEYEFEVHEKTYFKNILNSIRFSIQLSVKKIRREVDKSTWLLPPQALNAYYLPNKNQMVFPAGILQPTLYDPDFPQSLNYGGIGTIIGHELTHGYDDWGGQYDRSGNLLHWWTEASYSRFLRKAECIVHLYDNFTVYNQRVNGKHTLGENIADMGGLKLAYYAYQKWVREHGPEHPLHRLKYTHNQLFFIAFAQVCPNWCIKRRSQSIYLQVLTDKHAPEHYRVLGSVSQFEEFGRAFHCPRDSPMNPAHKCSVW", "length": 778, "header": "tr|F1SMT6-1|F1SMT6_PIG Isoform 1 of Endothelin converting enzyme like 1 OS=Sus scrofa OX=9823 GN=ECEL1 PE=4 SV=2 CANONICAL=F1SMT6-1" }, "locus": { "chromosome": "15", "start_pos": 132996310, "end_pos": 132989041, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017733.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017733.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017252.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017252.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "respiratory system process", "id": "GO:0003016", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003016", "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "pmid": "" }, { "name": "protein processing", "id": "GO:0016485", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016485", "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "pmid": "" }, { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "metalloendopeptidase activity", "id": "GO:0004222", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004222", "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SMT6", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" }, { "start_pos": 322, "end_pos": 324, "annotation": "n_glycosylation_sequon" }, { "start_pos": 656, "end_pos": 658, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SMT6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 778, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SMT6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SMT6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" }, { "id": "PF01431", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01431" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase M13 C-terminal", "eco_id": "ECO_0000259", "start_pos": 571, "end_pos": 777, "start_aa": "Asn", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SMT6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMT6" }, { "id": "PF05649", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05649" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase M13 N-terminal", "eco_id": "ECO_0000259", "start_pos": 122, "end_pos": 513, "start_aa": "Pro", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 255, "end_pos": 257 }, { "start_pos": 322, "end_pos": 324 }, { "start_pos": 656, "end_pos": 658 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMU0-1", "uniprot_ac": "F1SMU0", "uniprot_id": "F1SMU0_PIG", "mass": { "chemical_mass": 44144.0, "monoisotopic_mass": 44144.0 }, "refseq": {}, "gene_names": [ { "name": "CCBE1", "type": "recommended", "evidence": [ { "id": "F1SMU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMU0" } ] } ], "protein_names": [ { "name": "Collagen and calcium binding EGF domains 1", "type": "synonym", "evidence": [ { "id": "F1SMU0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMU0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMU0", "url": "https://www.uniprot.org/uniprotkb/F1SMU0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCBE1", "url": "https://www.uniprot.org/uniprotkb/F1SMU0", "locus": { "chromosome": "1", "start_pos": 161556537, "end_pos": 161321273, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004907", "url": "https://www.ensembl.org/id/ENSSSCG00000004907" } ] } } ], "crossref": [ { "id": "F1SMU0", "url": "https://alphafold.ebi.ac.uk/entry/F1SMU0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000004907", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004907", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100510995", "url": "https://www.ncbi.nlm.nih.gov/gene/100510995", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008160", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008160", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050751", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050751", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100510995", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510995", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "VMKAGTC", "url": "https://omabrowser.org/oma/group/VMKAGTC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2R6U5", "url": "https://www.orthodb.org/?gene=A0A5G2R6U5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24034", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24034", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24034:SF76", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24034:SF76", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24637", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24637", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24637:SF396", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24637:SF396", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01391", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01391", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07645", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R6U5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6U5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6U5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6U5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMU0", "url": "https://www.uniprot.org/uniprotkb/F1SMU0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMU0-1", "url": "https://www.uniprot.org/uniprotkb/F1SMU0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVPPPPSRGGAAKGQLGKSLGPLLLLLALGHTWSYREEPEDGDREICSENKIATTRYPCLKPSGELTTCFRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECATSNETLCAHICINTLGSYRCECREGYVQEDDGRTCTKGDKYPNDTGRDEKAENAVRAGTCCATCKELHQMKQTVLQLKQKIALLPNSAANLGKYITGDKVLASNAYLPGPPGLPGGQGPPGSPGPKGSPGFPGIPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVVSISSESTYCPLTGKVSPGPRGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSTEEFPLPQEFSSYPETSDLGSGDDDPKRTERRDSGASRDFYP", "length": 407, "header": "tr|F1SMU0-1|F1SMU0_PIG Isoform 1 of Collagen and calcium binding EGF domains 1 OS=Sus scrofa OX=9823 GN=CCBE1 PE=4 SV=3 CANONICAL=F1SMU0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R6U5-1", "url": "https://www.uniprot.org/uniprotkb/F1SMU0/entry#A0A5G2R6U5-1", "sequence": { "sequence": "MVPPPPSRGGAAKGQLGKSLGPLLLLLALGHTWSYREEPEDGDREICSENKIATTRYPCLKPSGELTTCFRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECATSNETLCAHICINTLGSYRCECREGYVQEDDGRTCTKGDKYPNDTGRDEKAENAVRAGTCCATCKELHQMKQTVLQLKQKIALLPNSAANLGKYITGDKVLASNAYLPGPPGLPGGQGPPGSPGPKGSPGFPGIPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSTEEFPLPQEFSSYPETSDLGSGDDDPKRTERRDSGASRDFYP", "length": 407, "header": "tr|A0A5G2R6U5-1|A0A5G2R6U5_PIG Computationally mapped isoform of Collagen and calcium binding EGF domains 1 OS=Sus scrofa OX=9823 GN=CCBE1 PE=4 SV=1 CANONICAL=F1SMU0-1" }, "locus": { "chromosome": "1", "start_pos": 161551827, "end_pos": 161321411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067151.1", "url": "https://www.ensembl.org/id/ENSSSCT00000067151.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072055.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072055.1" } ] } }, { "isoform_ac": "F1SMU0-1", "url": "https://www.uniprot.org/uniprotkb/F1SMU0/entry#F1SMU0-1", "sequence": { "sequence": "MVPPPPSRGGAAKGQLGKSLGPLLLLLALGHTWSYREEPEDGDREICSENKIATTRYPCLKPSGELTTCFRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYCLDIDECATSNETLCAHICINTLGSYRCECREGYVQEDDGRTCTKGDKYPNDTGRDEKAENAVRAGTCCATCKELHQMKQTVLQLKQKIALLPNSAANLGKYITGDKVLASNAYLPGPPGLPGGQGPPGSPGPKGSPGFPGIPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVVSISSESTYCPLTGKVSPGPRGSPGPPGSFDFLLLMLADIRNDITELQEKVFGHRTHSSTEEFPLPQEFSSYPETSDLGSGDDDPKRTERRDSGASRDFYP", "length": 407, "header": "tr|F1SMU0-1|F1SMU0_PIG Isoform 1 of Collagen and calcium binding EGF domains 1 OS=Sus scrofa OX=9823 GN=CCBE1 PE=4 SV=3 CANONICAL=F1SMU0-1" }, "locus": { "chromosome": "1", "start_pos": 161551827, "end_pos": 161321411, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005413.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005413.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005278.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005278.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMU0", "url": "https://www.uniprot.org/uniprotkb/F1SMU0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100510995", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100510995", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AR48-1", "protein_name": "Collagen and calcium binding EGF domains 1", "gene_name": "Ccbe1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVPPLPLSRGGAVKGQLGKSLGPLLLLLALGHTWTFREEPEDRDREVCSENKITTTKYPCLKSSGELTTCFRKKCCKGYKFVLGQCIPEDYDICAQAPCEQQCTDNFGRVLCTCYPGYRYDRERHQKREKPYCLDIDECATGNTTLCAHTCVNTMGSYHCECREGYILEDDGRTCTRGDKYPNDTGHEEKSENEVKAGTCCATCKEFSQMKQTVLQLKQKISLLPNNAAELGKYVNGDKVLASNTYLPGPPGLPGGQGPPGSPGPKGSPGFPGMPGPPGQPGPRGSMGPMGPSPDLSHIKQGRRGPVGPPGAPGRHGLKGERGAPGPPGSPGPPGSFDFLLLVLADIRNDIAELQEKVFGHRIHSSAEDFPLPQEFSSYPETLDFGSGDDYSRRTEARDSEAPRNFYP", "length": 408 }, "evidence": [ { "id": "F1SMU0", "url": "https://omabrowser.org/oma/group/F1SMU0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0YBY1-1", "protein_name": "Collagen and calcium binding EGF domains 1", "gene_name": "CCBE1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGRPARSLAPLRLLLLVALGHAWTYREEPQDSDREVCSENKIATTRYPCLKPTGELTTCFRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRNREKPYCLDIDECAASNGTLCSHICINTVGSYRCECHEGYTRGEDGRTCTKGDKAGLSEKSENVAKPGTCCASCKEFHQIKQTVLQLKQKVSLLPNNAADLSKQITGEKVLASNAYIPGPPGQPGQQGPPGAPGPKGSQGVPGSPGPPGQPGPRGSMGPMGPSPDISHIKQGRRGPVGPPGAPGRDGSKGERGAPGPKGIPGPPGSFDFLLLMMADIRNDIAELQERVFGRRTHSSTEEFPLPQEFTNYHDTVDFGSGEDYKPRAAPRDSRIQKAAHP", "length": 393 }, "evidence": [ { "id": "F1SMU0", "url": "https://omabrowser.org/oma/group/F1SMU0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9RW55-1", "protein_name": "Collagen and calcium binding EGF domains 1", "gene_name": "CCBE1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVPPPPNRAGAARDRLGRSLGLLLLLLALGHAWSYREEPGDGDREVCSENNIATTKYPCLKPSGELTTCFRKKCCKGYKFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRRREKPYCLDIDECATSNETLCAHICVNTVGSYRCECREGYVQEEDGRTCTKEDKYPNDTGHDDEKVENAVRAATCCATCKELHQVKQTVLQLKQKVALLPNSAADLGKYITGHKALASNAYLPGPPGLPGGQGPPGSPGPKGSPGFPGIPGPPGQPGPRGSMGPVGPSPDLSHIKQGRRGPVGPPGAPGRDGSKGERGAPGPRGSPGPPGSFDFLLIVLAEIRNDITELQEQVFGRRTHSSAEESPSPQELPSYPETLDMGSGDDAPGRTETRASGAARDFYP", "length": 408 }, "evidence": [ { "id": "F1SMU0", "url": "https://omabrowser.org/oma/group/F1SMU0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A8WGB1-1", "protein_name": "Collagen and calcium-binding EGF domain-containing protein 1", "gene_name": "ccbe1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MIYPGRGASLSVAVALVLFSSGAPWTFREEKEDVDREVCSESKIATTKYPCVKSTGEVTTCYRKKCCEGFKFVLGQCIPEDYDVCAGAPCEQQCTDHFGRVVCTCYDGYRYDRERHRNREKPYCLDIDECANNNETVCSQMCVNTPGSYRCDCHSGFYLEDDGKTCTKGERAPLFEKSDNVMKEGTCSATCEDFHQMKMTVLQLKQKMSLLSSNTEINKQMTNEKMMMTTNSFLPGPPGPPGPAGTPGAKGSSGSPGQMGPPGLPGPRGDMGPIGPSPDLSHIKQGRRGPVGPPGAPGRDGMKGERGFPGPSGPPGPPGSFDFLLLMMADIRNDIAELQSKVFSRPLHSSFEDFPSAPDSWRDTPENLDFGSGEDYKSQSPPKSSRKRKLPRNLKNPDWPV", "length": 401 }, "evidence": [ { "id": "F1SMU0", "url": "https://omabrowser.org/oma/group/F1SMU0/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3MI99-1", "protein_name": "Collagen and calcium-binding EGF domain-containing protein 1", "gene_name": "Ccbe1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMW6", "url": "https://www.uniprot.org/uniprotkb/F1SMW6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152588", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152588", "resource": "KEGG Pathway" } ], 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"GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000215", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000215", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023795", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023795", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036186", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036186", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042178", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042178", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519286", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519286", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MEDLYVA", "url": "https://omabrowser.org/oma/group/MEDLYVA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SMW7", "url": "https://www.orthodb.org/?gene=F1SMW7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11461", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11461", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11461:SF61", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11461:SF61", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00079", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00079", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-75205", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75205", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003121745", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121745", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AND4", "url": "https://www.uniprot.org/uniprotkb/A0A287AND4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AND4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AND4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMW7", "url": "https://www.uniprot.org/uniprotkb/F1SMW7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMW7-1", "url": "https://www.uniprot.org/uniprotkb/F1SMW7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSELQQPSEVHFLSDCTSENNQIETMEELYVANTIFALNFFKHLANTSAAQNLFFSPWSISSTMAMVYLGARGNTADQMAKVLQFNKVGVHEGIPVTLESFTSGDVMQHVQKGPYPDAILQAQAAGKIHSSFYSLSSAINASTGAYVLESANKLFGEKSSRFKEEYIRLSKKYYSTEPQEVDFLECAEEARKKINSWVKIQTKGKIPSLLPEGSVDAETKMVLVNAVYFKGKWKTPFQKKLNGLYPFRVNLTKRIPVQMMLLHEKLNIGYLADLKAQILELPYAGDVSMFLLLPDEVAESSTGLELLESEITYDKLNTWISEDTMAEDDVEVYLPQFKLEEHYELKSILSRMGMDEAFSQGQANFLGMSEKNDLYLSQVFHQASVDVNEEGTEAAAGTGAILSGRTGHGGPQFVADHPFLFLIMHKTTKNILFLGRFASP", "length": 440, "header": "tr|F1SMW7-1|F1SMW7_PIG Isoform 1 of Serpin family B member 2 OS=Sus scrofa OX=9823 GN=SERPINB2 PE=1 SV=2 CANONICAL=F1SMW7-1" }, "isoforms": [ { "isoform_ac": "A0A287AND4-1", "url": "https://www.uniprot.org/uniprotkb/F1SMW7/entry#A0A287AND4-1", "sequence": { "sequence": "MSELQQPSEVHFLSDCTSENNQVLQFNKVGVHEGIPVTLESFTSGDVMQHVQKGPYPDAILQAQAAGKIHSSFYSLSSAINASTGAYVLESANKLFGEKSSRFKEEYIRLSKKYYSTEPQEVDFLECAEEARKKINSWVKIQTKGKIPSLLPEGSVDAETKMVLVNAVYFKGKWKTPFQKKLNGLYPFRVNLTKRIPVQMMLLHEKLNIGYLADLKAQILELPYAGDVSMFLLLPDEVAESSTGLELLESEITYDKLNTWISEDTMAEDDVEVYLPQFKLEEHYELKSILSRMGMDEAFSQGQANFLGMSEKNDLYLSQVFHQASVDVNEEGTEAAAGTGAILSGRTGHGGPQFVADHPFLFLIMHKTTKNILFLGRFASP", "length": 381, "header": "tr|A0A287AND4-1|A0A287AND4_PIG Computationally mapped isoform of Serpin family B member 2 OS=Sus scrofa OX=9823 GN=SERPINB2 PE=1 SV=1 CANONICAL=F1SMW7-1" }, "locus": { "chromosome": "1", "start_pos": 157886447, "end_pos": 157872481, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042083.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042083.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045410.1", "url": "https://www.ensembl.org/id/ENSSSCP00000045410.1" } ] } }, { "isoform_ac": "F1SMW7-1", "url": "https://www.uniprot.org/uniprotkb/F1SMW7/entry#F1SMW7-1", "sequence": { "sequence": "MSELQQPSEVHFLSDCTSENNQIETMEELYVANTIFALNFFKHLANTSAAQNLFFSPWSISSTMAMVYLGARGNTADQMAKVLQFNKVGVHEGIPVTLESFTSGDVMQHVQKGPYPDAILQAQAAGKIHSSFYSLSSAINASTGAYVLESANKLFGEKSSRFKEEYIRLSKKYYSTEPQEVDFLECAEEARKKINSWVKIQTKGKIPSLLPEGSVDAETKMVLVNAVYFKGKWKTPFQKKLNGLYPFRVNLTKRIPVQMMLLHEKLNIGYLADLKAQILELPYAGDVSMFLLLPDEVAESSTGLELLESEITYDKLNTWISEDTMAEDDVEVYLPQFKLEEHYELKSILSRMGMDEAFSQGQANFLGMSEKNDLYLSQVFHQASVDVNEEGTEAAAGTGAILSGRTGHGGPQFVADHPFLFLIMHKTTKNILFLGRFASP", "length": 440, "header": "tr|F1SMW7-1|F1SMW7_PIG Isoform 1 of Serpin family B member 2 OS=Sus scrofa OX=9823 GN=SERPINB2 PE=1 SV=2 CANONICAL=F1SMW7-1" }, "locus": { "chromosome": "1", "start_pos": 157886447, "end_pos": 157872481, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005396.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005396.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005261.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005261.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMW7", "url": "https://www.uniprot.org/uniprotkb/F1SMW7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519286", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519286", "resource": "KEGG Pathway" }, { "id": "R-SSC-75205", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-75205", "resource": "Reactome", "description": "Dissolution of Fibrin Clot" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YC35-1", "protein_name": "Serpin family B member 2", "gene_name": "SERPINB2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEALNKANTSFALDFFKHECQEDDNKNILFSPLSISSALATVYLGAKGNTADQMAKVLYFNEAEGARNVTTTIRMQVYSRTDERLSNHRACFQKTEIGKSGNIHAGFKALNLEINQPTKSYLLRSVNQLYGEKSLPFSKEYLQLAKKYYSAEPQSVDFVGAANAIRREINSTVEHQTEGKIKSLLPPGSIDSLTRLVLVNALYFKGNWATKFDAEDTRQRPFRINTHTTKPVPIMHLSDKFNWTYVESAQIDVLELPYVNNELSMFILLPRDITGLQKLINELTFEKLSAWTSPELMEKMKMEVYLPRFTVEEKYDLKSTLSKMGIEDAFTEGQADFRGMSENADLFLSQVFHKCYVEVNEEGTEAAAASSASLASRTLGATVIFVADHPFLFIIRHNKTKCILFLGRFCSP", "length": 412 }, "evidence": [ { "id": "F1SMW7", "url": "https://omabrowser.org/oma/group/F1SMW7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P05120-1", "protein_name": "Plasminogen activator inhibitor 2", "gene_name": "SERPINB2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDLCVANTLFALNLFKHLAKASPTQNLFLSPWSISSTMAMVYMGSRGSTEDQMAKVLQFNEVGANAVTPMTPENFTSCGFMQQIQKGSYPDAILQAQAADKIHSSFRSLSSAINASTGNYLLESVNKLFGEKSASFREEYIRLCQKYYSSEPQAVDFLECAEEARKKINSWVKTQTKGKIPNLLPEGSVDGDTRMVLVNAVYFKGKWKTPFEKKLNGLYPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDEIADVSTGLELLESEITYDKLNKWTSKDKMAEDEVEVYIPQFKLEEHYELRSILRSMGMEDAFNKGRANFSGMSERNDLFLSEVFHQAMVDVNEEGTEAAAGTGGVMTGRTGHGGPQFVADHPFLFLIMHKITNCILFFGRFSSP", "length": 415 }, "evidence": [ { "id": "F1SMW7", "url": "https://omabrowser.org/oma/group/F1SMW7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P12388-1", "protein_name": "Plasminogen activator inhibitor 2, macrophage", "gene_name": "Serpinb2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEELSMANTMFALNLLKQIEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGSYGITTRNPENFSGCDFAQQIQKENYPSAILQAQAGDKIHSAFSSLSSTINTPQGDYLLESANKLFGEKSARFKEEYIQLSKKYYSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDEDTKMVLVNAVYFKGKWKTPFEKKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKDLKTQILELPHTGNISMLLLLPDEIEDASTGLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYELKSILQSMGMEDAFNKGKANFSGMSERNDLFLSEVFHQASVDVTEEGTVAAGGTGAVMTGRTGHGGPQFVADHPFLFFIMDKITHTILFVGRFSSP", "length": 415 }, "evidence": [ { "id": "F1SMW7", "url": "https://omabrowser.org/oma/group/F1SMW7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P29524-1", "protein_name": "Plasminogen activator inhibitor 2 type A", "gene_name": "Serpinb2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEELSMANTMFALNLLKQIEQSNSTQNIFISPWSISSTLAIVFLGAQANTEEQMAKVLNFDKIGSYDLTPGNPENFHGCDFAQHIQRDNYPVAILQAQARDKIHSAFSSLSSTINTPRLGDYLLESANKLFGEKSARFKEEYIQRCKKYYSTEPEAVDFLECANEARKKINSWVKTQTKGEIPNLLPEGSVDEDTKMVLVNTIYFKGRWKTPFQKRLNGLYPFRVNLNESKPVQMMYLREKLNIGYIKDLKTQILELPYIGNISMFLLLPDEIEDSSTGLEMLEREINFDNFNKWISKETLDEDDVLVYIPKFKLAQNYELKPILQRMGMEDAFNKGKADFSGMSESNDLFLSEVFHQATVDVNEEGTVAAGGTGAVMTGRTGHGGPQFVADHPFLFFIMNNITRTILFVGRFSSP", "length": 416 }, "evidence": [ { "id": "F1SMW7", "url": "https://omabrowser.org/oma/group/F1SMW7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase inhibitor activity", "id": "GO:0004867", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004867", "evidence": [ { "database": "UniProtKB", "id": "F1SMW7", "url": "https://www.uniprot.org/uniprotkb/F1SMW7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SMW7", "url": "https://www.uniprot.org/uniprotkb/F1SMW7" } ], "pmid": "" }, { "name": "cornified envelope", "id": "GO:0001533", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001533", "evidence": [ { "database": "UniProtKB", "id": "F1SMW7", "url": "https://www.uniprot.org/uniprotkb/F1SMW7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 250, "end_pos": 252, "annotation": "n_glycosylation_sequon" }, { "start_pos": 46, "end_pos": 48, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMW7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMW7" }, { "id": "SM00093", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00093" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Serpin", "eco_id": "ECO_0000259", "start_pos": 38, "end_pos": 440, "start_aa": "Leu", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 140, "end_pos": 142 }, { "start_pos": 250, "end_pos": 252 }, { "start_pos": 46, "end_pos": 48 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 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{ "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMX7-1", "uniprot_ac": "F1SMX7", "uniprot_id": "F1SMX7_PIG", "mass": { "chemical_mass": 42563.0, 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"https://www.uniprot.org/uniprotkb/F1SMX7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SERPINB8", "url": "https://www.uniprot.org/uniprotkb/F1SMX7", "locus": { "chromosome": "1", "start_pos": 157820657, "end_pos": 157836904, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004888", "url": "https://www.ensembl.org/id/ENSSSCG00000004888" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004888", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004888", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156248", "url": "https://www.ncbi.nlm.nih.gov/gene/100156248", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000215", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000215", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000240", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000240", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023795", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023795", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023796", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023796", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036186", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036186", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042178", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042178", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042185", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042185", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156248", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156248", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RVAHKCF", "url": 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"categories": [ "Protein" ] }, { "id": "F1SMX7-1", "url": "https://www.uniprot.org/uniprotkb/F1SMX7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDLREANGTFAINLLKMLSEEDNLRNVFLSPLSLSSALAMVLLGAKGNTEAQMSQALCLNRVGDVHQSFQSLLKEMNKSTTQCLLRTANRLFGEKTCDFLPAFKESCQNFYEADLEELSFAEDTEECRKHINDWVKEKTEGKISEILGAGTVGPLTKLVLVNAIYFKGKWNKQFDRKYTRGMPFKTNQEKKTVQMMFKQAKFKMGYVDEVHAQVLELPYVGEELSMVILLPDDNTDLAVVEKALTYEKFRAWTNPEKLTEDKVQVFLPRLKLEESYDLEAFLRSLGMIDAFEEAKADFSGMSVRKNVPVSKVMHKCFVEVNEEGTEAAAATAVVRNSRCSRIEPRFCADHPFLFFIRHLETNSILFCGRFSSP", "length": 374, "header": "tr|F1SMX7-1|F1SMX7_PIG Isoform 1 of Serpin B8 OS=Sus scrofa OX=9823 GN=SERPINB8 PE=3 SV=3 CANONICAL=F1SMX7-1" }, "isoforms": [ { "isoform_ac": "F1SMX7-1", "url": "https://www.uniprot.org/uniprotkb/F1SMX7/entry#F1SMX7-1", "sequence": { "sequence": "MEDLREANGTFAINLLKMLSEEDNLRNVFLSPLSLSSALAMVLLGAKGNTEAQMSQALCLNRVGDVHQSFQSLLKEMNKSTTQCLLRTANRLFGEKTCDFLPAFKESCQNFYEADLEELSFAEDTEECRKHINDWVKEKTEGKISEILGAGTVGPLTKLVLVNAIYFKGKWNKQFDRKYTRGMPFKTNQEKKTVQMMFKQAKFKMGYVDEVHAQVLELPYVGEELSMVILLPDDNTDLAVVEKALTYEKFRAWTNPEKLTEDKVQVFLPRLKLEESYDLEAFLRSLGMIDAFEEAKADFSGMSVRKNVPVSKVMHKCFVEVNEEGTEAAAATAVVRNSRCSRIEPRFCADHPFLFFIRHLETNSILFCGRFSSP", "length": 374, "header": "tr|F1SMX7-1|F1SMX7_PIG Isoform 1 of Serpin B8 OS=Sus scrofa OX=9823 GN=SERPINB8 PE=3 SV=3 CANONICAL=F1SMX7-1" }, "locus": { "chromosome": "1", "start_pos": 157832459, "end_pos": 157822507, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005394.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005394.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005259.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005259.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMX7", "url": "https://www.uniprot.org/uniprotkb/F1SMX7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156248", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156248", "resource": "KEGG Pathway" }, { "id": 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"MYTSHEDIGYDFEDDPKEKKTLKPHPDIDGGWAWMMVLSSFFVHILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGVTLIVGPFIGLFINTCGCRRTAIIGGLLNSLGWVLSAYAANVHYLFITFGLAAGFGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMFIQGAVSLNLCVCGALMRPLSPGMDGDVPGGKEPHVIPAHSTESIRSSGQPGGTEEKEGGPGTDDSLGDVPVPEKAAHRKDMCAFRVLKMMSQLTVKIRKGFQDWYSGYFGTASLFTNRMFVAFVFWALFAYSSFVIPFIHLPEIVNLYNLSEENDVFPLTSIIAIVHIFGKVILGIVADLPCISVWNVFLMANFTLVLCIFILPSMHTYASLAVICALIGFSSGYFSLMPVVTEDLVGIEHLANAYGIIICANGISALLGPPFAGWIYDITQKYDFSFYVCGLLYMVGILFLLIQPCIHIIEQSRKKYMDGANA", "length": 507, "header": "tr|F1SMZ2-1|F1SMZ2_PIG Isoform 1 of Solute carrier family 16 member 14 OS=Sus scrofa OX=9823 GN=SLC16A14 PE=4 SV=2 CANONICAL=F1SMZ2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZV57-1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2/entry#A0A286ZV57-1", "sequence": { "sequence": "MYTSHEDIGYDFEDDPKEKKTLKPHPDIDGGWAWMMVLSSFFVHILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGVTLIVGPFIGLFINTCGCRRTAIIGGLLNSLGWVLSAYAANVHYLFITFGLAAGFGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMFIQGAVSLNLCVCGALMRPLSPGMDGDVPGGKEPHVIPAHSTESIRSSGQPGGTEEKEGGPGTDDSLGDVPVPEKAAHRKDMCAFRVLKMMSQLTVKIRKGFQDWYSGYFGTASLFTNRMFVAFVFWALFAYSSFVIPFIHLPEIVNLYNLSEENDVFPLTSIIAIVHIFGKVILGIVADLPCISVWNVFLMANFTLVLCIFILPSMHTYASLAVICALIGFSSGYFSLMPVVTEDLVGIEHLANAYGIIICANGISALLGPPFAGFTWSPLHQDITPCTEWPSRFSLLPEPAGHIAKRAVVWE", "length": 496, "header": "tr|A0A286ZV57-1|A0A286ZV57_PIG Computationally mapped isoform of Solute carrier family 16 member 14 OS=Sus scrofa OX=9823 GN=SLC16A14 PE=4 SV=2 CANONICAL=F1SMZ2-1" }, "locus": { "chromosome": "15", "start_pos": 131071055, "end_pos": 131026979, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046127.2", "url": "https://www.ensembl.org/id/ENSSSCT00000046127.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035485.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035485.2" } ] } }, { "isoform_ac": "F1SMZ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2/entry#F1SMZ2-1", "sequence": { "sequence": "MYTSHEDIGYDFEDDPKEKKTLKPHPDIDGGWAWMMVLSSFFVHILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGVTLIVGPFIGLFINTCGCRRTAIIGGLLNSLGWVLSAYAANVHYLFITFGLAAGFGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMFIQGAVSLNLCVCGALMRPLSPGMDGDVPGGKEPHVIPAHSTESIRSSGQPGGTEEKEGGPGTDDSLGDVPVPEKAAHRKDMCAFRVLKMMSQLTVKIRKGFQDWYSGYFGTASLFTNRMFVAFVFWALFAYSSFVIPFIHLPEIVNLYNLSEENDVFPLTSIIAIVHIFGKVILGIVADLPCISVWNVFLMANFTLVLCIFILPSMHTYASLAVICALIGFSSGYFSLMPVVTEDLVGIEHLANAYGIIICANGISALLGPPFAGWIYDITQKYDFSFYVCGLLYMVGILFLLIQPCIHIIEQSRKKYMDGANA", "length": 507, "header": "tr|F1SMZ2-1|F1SMZ2_PIG Isoform 1 of Solute carrier family 16 member 14 OS=Sus scrofa OX=9823 GN=SLC16A14 PE=4 SV=2 CANONICAL=F1SMZ2-1" }, "locus": { "chromosome": "15", "start_pos": 131071055, "end_pos": 131046417, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039911.3", "url": "https://www.ensembl.org/id/ENSSSCT00000039911.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052254.3", "url": "https://www.ensembl.org/id/ENSSSCP00000052254.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ2", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519114", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519114", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7GSK8-1", "protein_name": "Monocarboxylate transporter 14", "gene_name": "Slc16a14", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYTSHEDIGYVLDDDPKAKKPLKPHPDIDGGWAWVMVLSSFFVHMLIMGSQMALGVLNVEWLEEFQQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGLVNSLGWVLSAYAPNVQTLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTLLLKYLCAEYGWRKAMFIQGAVSLNLCVCGALMRPLSPGKVENCPREEKPCALPAYSTESVKSGPLGLTEEQDRQPGNEETVCDLQAQECQGQTHPRKNMCAFRVLKTVSQLTVRVRKGFGDWYSGYFGTASLFTNRMFVAFIFWALFAYSSFVIPFIHLPEIVSLYGLSEQNDMFPLTSIIAILHIFGKVILGAVADLPCISVWNVFLIANFTLVFSIFLLPLMHTYASLAVICALIGFSSGYFSLMPVVTEDLVGTEHLANAYGIIICANGISALLGPPFAGWIFDITQKYDFSFYICGLLYMVGILFLLIQPCIQMVEQSRRKYTDGAHV", "length": 509 }, "evidence": [ { "id": "F1SMZ2", "url": "https://omabrowser.org/oma/group/F1SMZ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9TYA2-1", "protein_name": "Solute carrier family 16 member 14", "gene_name": "SLC16A14", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MYTSHEDIGYDFEDDPKDKKTLKPHPDIDGGWAWVMVLSSFFVHILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGVTLIVGPFIGLFINTCGCRRTAIIGGLLNSLGWVLSAYAVNVYYLFITFGLAAGFGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMFIQGAVSLNLCVCGALMRPLSPGMDGDGPEGKAPHHVLPAHSTESIRSSGQLRDAEEKRGGPGTEDSSLGDAPAQACQEKAAHRKDMCAFRLLKTVSQLTMRVRKGFWDWYSGYFGTASLFTNRMFVAFIFWALFAYSSFVIPFIHLPEIVNLYNLSEQNDVFPLTSIIAIVHIFGKVVLGIVADLPCISVWNVFLMANFTLVLSIFILPLMHTYAGLAVICALIGFSSGYFSLMPVVTEDLVGIEHLANAYGIIICANGISALLGPPFAGWIYDITQKYDFSFYISGLLYMSFPASGFFPVNWLFTSGGQSIGASASASALPINVQG", "length": 520 }, "evidence": [ { "id": "F1SMZ2", "url": "https://omabrowser.org/oma/group/F1SMZ2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D4A0E5-1", "protein_name": "Monocarboxylate transporter 14", "gene_name": "Slc16a14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYTSHEDIGYDLEDDRKAKNKKTLKPHPDIDGGWAWMMVLSSFFVHILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGLVNSLGWVLSAYAANVQSLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMFIQGALSLNLCVCGALMRPLSPEKVENCSGAEEPCALPAYSTESVKSGGPLDMTEEQDRRPGNEETVCDLQTQELQGQTHPRKNVCAFRVLKTVGQLTVRVQRGFRDWHSGYFGTASLFTNRMFVAFIFWALFAYSSFVIPFIHLPEIVSLYNLSEQNDAFPLTSIIAILHIFGKVILGAVADLPCISVWNVFLIANFTLVLSIFLLPLMHTYASLAVICALIGFSSGYFSLMPVVTEDLVGTEHLANAYGIIICANGISALLGPPFAGWIFDITQKYDFSFYICGLLYMVGILFLLIQPCIQMTEQSGRKCMDSAHV", "length": 512 }, "evidence": [ { "id": "F1SMZ2", "url": "https://omabrowser.org/oma/group/F1SMZ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1C1Q8-1", "protein_name": "Solute carrier family 16 member 14", "gene_name": "SLC16A14", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MYASREDIGYDFGDDSKVGSKPIKPNPNIDGGWAWMIVFSSFLVHILIMGSQMALGILNMEWLEEFNQSRGLTAWVSSLSMGITLIVGPFIGLFITMCGCRKTAIIGGILNALGWILSAYASNVHYLFLTFGVTAGIGSGMVYLPAVVMVGQYFHKRRALAQGLSTTGTGFGAFLMTALLKYLCREFGWRNAMFIQGAICLNLCVCGALMRPLSPKVLNEKYVVRSNSEDNQAKALSHSAETIKSNGVLSEEPEKKEVIKNEEVLDDIKHIEIGGKSRIGKSMYGLRILKTVSQQTVTVRKGFGIWYSSYFGAASLFTNRVFVAFIIWALFAYSSFVIPFIHLPEIVKQYSLSSQNNVFPLTSIIAIVHIFGKVILGIISDLPCISTWNVFLMANFTLVTCILTLPLMQTYISLAVVCALIGFSSGYFSLMPVVTEDLVGTKHLANAYGIIICANGISALLGPPFAGWIYDITHKYDFSFYICGSLYLVGILFLFMQPYIGKKQSQEKSTEEAQV", "length": 515 }, "evidence": [ { "id": "F1SMZ2", "url": "https://omabrowser.org/oma/group/F1SMZ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q7RTX9-1", "protein_name": "Monocarboxylate transporter 14", "gene_name": "SLC16A14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MYTSHEDIGYDFEDGPKDKKTLKPHPNIDGGWAWMMVLSSFFVHILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGLVNSLGWVLSAYAANVHYLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMLIQGAVSLNLCVCGALMRPLSPGKNPNDPGEKDVRGLPAHSTESVKSTGQQGRTEEKDGGLGNEETLCDLQAQECPDQAGHRKNMCALRILKTVSWLTMRVRKGFEDWYSGYFGTASLFTNRMFVAFIFWALFAYSSFVIPFIHLPEIVNLYNLSEQNDVFPLTSIIAIVHIFGKVILGVIADLPCISVWNVFLLANFTLVLSIFILPLMHTYAGLAVICALIGFSSGYFSLMPVVTEDLVGIEHLANAYGIIICANGISALLGPPFAGWIYDITQKYDFSFYICGLLYMIGILFLLIQPCIRIIEQSRRKYMDGAHV", "length": 510 }, "evidence": [ { "id": "F1SMZ2", "url": "https://omabrowser.org/oma/group/F1SMZ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K1C7-1", "protein_name": "Monocarboxylate transporter 14", "gene_name": "Slc16a14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MYTSHEDIGYDLEDDRKAKNKKTLKPHPDIDGGWAWMMVLSSFFVHILIMGSQMALGVLNVEWLEEFHQSRGLTAWVSSLSMGITLIVGPFIGLFINTCGCRQTAIIGGLVNSLGWVLSAYAANVQSLFITFGVAAGLGSGMAYLPAVVMVGRYFQKRRALAQGLSTTGTGFGTFLMTVLLKYLCAEYGWRNAMFIQGALSLNLCVCGALMRPLSPEKLENCPEAEEPCALPAYSTESVKSGGPLGMAEEQDRRPGNEEMVCDLQTQECQGQTHPRKNVCAFRVLKTVSQLTVQVRRGFRDWHSGYFGTASLFTNRMFVAFIFWALFAYSSFVIPFIHLPEIVSLYNLSEQNDTFPLTSIIAILHIFGKVILGAVADLPCISVWNVFLIANFTLVLSIFLLPLMHTYASLAVICALIGFSSGYFSLMPVVTEDLVGTEHLANAYGIIICANGISALLGPPFAGWIFDITQKYDFSFYICGLLYMVGILFLLIQPCIQMIDQSRRKCIEGAHV", "length": 512 }, "evidence": [ { "id": "F1SMZ2", "url": "https://omabrowser.org/oma/group/F1SMZ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ2", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ2", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "monocarboxylic acid transmembrane transporter activity", "id": "GO:0008028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008028", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ2", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2" } ], "pmid": "" }, { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ2", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "carboxylic acid transmembrane transport", "id": "GO:1905039", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905039", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ2", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 342, "end_pos": 344, "annotation": "n_glycosylation_sequon" }, { "start_pos": 386, "end_pos": 388, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMZ2" }, { "id": "PS50850", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50850" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Major facilitator superfamily (MFS) profile", "eco_id": "ECO_0000259", "start_pos": 36, "end_pos": 493, "start_aa": "Met", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 342, "end_pos": 344 }, { "start_pos": 386, "end_pos": 388 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { 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{ "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SMZ3-1", "uniprot_ac": "F1SMZ3", "uniprot_id": "F1SMZ3_PIG", "mass": { "chemical_mass": 22125.0, "monoisotopic_mass": 22125.0 }, "refseq": { "ac": "XP_020930759", "name": "F-box only protein 36", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930759" }, "gene_names": [ { "name": "FBXO36", "type": "recommended", "evidence": [ { "id": "F1SMZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3" } ] }, { "name": "FBXO36", "type": "synonym", "evidence": [ { "id": "XP_020930759", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930759" } ] } ], "protein_names": [ { "name": "F-box only protein 36", "type": "synonym", "evidence": [ { "id": "XP_020930759", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930759" } ] }, { "name": "F-box protein 36", "type": "synonym", "evidence": [ { "id": "F1SMZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SMZ3", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FBXO36", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3", "locus": { "chromosome": "15", "start_pos": 131029086, "end_pos": 130940093, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016259", "url": "https://www.ensembl.org/id/ENSSSCG00000016259" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016259", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016259", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22106", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22106", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100736632", "url": "https://www.ncbi.nlm.nih.gov/gene/100736632", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052301", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052301", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100736632", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736632", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CNSDELW", "url": "https://omabrowser.org/oma/group/CNSDELW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SMZ3", "url": "https://www.orthodb.org/?gene=F1SMZ3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14381", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14381", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14381:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14381:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12937", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12937", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020930759", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020930759", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4F8M1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8M1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8M1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8M1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMZ3", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SMZ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASWLPETLFEIVGQGPAPSKDYYQLLITRSQVIFRWWKISLRSEYRSAKPGETKETHENFLENSHLQVQIALIFGAKILDYVFNLCEGKFDFLERLSDSLLLNIISYLDLEDIARLSQTSRRFAKLCTSDKLWEQIVQSACDHITPDMRALAEDMGWRQMFFTNKLQLQRHLRKRKQRHGSQRSSQP", "length": 188, "header": "tr|F1SMZ3-1|F1SMZ3_PIG Isoform 1 of F-box protein 36 OS=Sus scrofa OX=9823 GN=FBXO36 PE=4 SV=3 CANONICAL=F1SMZ3-1" }, "isoforms": [ { "isoform_ac": "A0A8W4F8M1-1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3/entry#A0A8W4F8M1-1", "sequence": { "sequence": "VIFRWWKISLRSEYRSAKPGETKETHENFLENSHLQVQIALIFGAKILDYVFNLCEGKFDFLERLSDSLLLNIISYLDLEDIARLSQTSRRFAKLCTSDKLWEQIVQSACDHITPDMRALAEDMGWRQMFFTNKLQLQRHLRKRKQRHGSQRSSQP", "length": 156, "header": "tr|A0A8W4F8M1-1|A0A8W4F8M1_PIG Computationally mapped isoform of F-box protein 36 OS=Sus scrofa OX=9823 GN=FBXO36 PE=4 SV=1 CANONICAL=F1SMZ3-1" }, "locus": { "chromosome": "15", "start_pos": 131028776, "end_pos": 130995237, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102411.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102411.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075665.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075665.1" } ] } }, { "isoform_ac": "F1SMZ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3/entry#F1SMZ3-1", "sequence": { "sequence": "MASWLPETLFEIVGQGPAPSKDYYQLLITRSQVIFRWWKISLRSEYRSAKPGETKETHENFLENSHLQVQIALIFGAKILDYVFNLCEGKFDFLERLSDSLLLNIISYLDLEDIARLSQTSRRFAKLCTSDKLWEQIVQSACDHITPDMRALAEDMGWRQMFFTNKLQLQRHLRKRKQRHGSQRSSQP", "length": 188, "header": "tr|F1SMZ3-1|F1SMZ3_PIG Isoform 1 of F-box protein 36 OS=Sus scrofa OX=9823 GN=FBXO36 PE=4 SV=3 CANONICAL=F1SMZ3-1" }, "locus": { "chromosome": "15", "start_pos": 131028776, "end_pos": 130940103, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017704.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017704.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017223.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017223.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SMZ3", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736632", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736632", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6ARV1-1", "protein_name": "F-box protein 36", "gene_name": "Fbxo36", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "PKKNRRPCLRAASPQRGKEGKKDSAKCPKEKPAGGERDGLSSRIIFRWWKISLRSEYRSAKPGETKETHEDFLDNSHLQVQVAVVFGAKILDYVFNLCEGKFDYLERLSDKLLLKIMNYLDLEDIARLSQTSSRFEKLCKSDSLWEQIVQSTYDTITPDMRALANDVGWRQMFFTNKIQLQRQIRKKKQRQGSETTKPT", "length": 199 }, "evidence": [ { "id": "F1SMZ3", "url": "https://omabrowser.org/oma/group/F1SMZ3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8NEA4-1", "protein_name": "F-box only protein 36", "gene_name": "FBXO36", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASWLPETLFETVGQGPPPSKDYYQLLVTRSQVIFRWWKISLRSEYRSTKPGEAKETHEDFLENSHLQGQTALIFGARILDYVINLCKGKFDFLERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGWRQLFFTNKLQLQRQLRKRKQKYGNLREKQP", "length": 188 }, "evidence": [ { "id": "F1SMZ3", "url": "https://omabrowser.org/oma/group/F1SMZ3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CQ24-1", "protein_name": "F-box only protein 36", "gene_name": "Fbxo36", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASWLPETLFEIVGQGPAPSKDYYQLLITRTQIIFRWWKISLRSEYRSAKPGETKESHEDFLDNSHLQVQVAVVFGTKILDYVFNLCEGKFDYLERLSDRLLLKIICYLDLEDIASLSQTSSKFEKLCKSDLLWEQIVQSTCDTITPDMRALAKNMGWRQMFLTNNIQLQRQTRKKKQRQENQAEKLA", "length": 188 }, "evidence": [ { "id": "F1SMZ3", "url": "https://omabrowser.org/oma/group/F1SMZ3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SMZ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SMZ3" }, { "id": "PS50181", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50181" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000259", "start_pos": 91, "end_pos": 137, "start_aa": "Phe", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SN45-1", "uniprot_ac": "F1SN45", "uniprot_id": "F1SN45_PIG", "mass": { "chemical_mass": 89776.0, "monoisotopic_mass": 89776.0 }, "refseq": {}, "gene_names": [ { "name": "AFG2B", "type": "recommended", "evidence": [ { "id": "F1SN45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ] } ], "protein_names": [ { "name": "ATPase family gene 2 protein homolog B", "type": "recommended", "evidence": [ { "id": "F1SN45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN45/entry#names_and_taxonomy" } ] }, { "name": "3.6.4.10", "type": "synonym", "evidence": [ { "id": "F1SN45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN45/entry#names_and_taxonomy" } ] }, { "name": "AFG2 AAA ATPase homolog B", "type": "synonym", "evidence": [ { "id": "F1SN45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN45/entry#names_and_taxonomy" } ] }, { "name": "Ribosome biogenesis protein SPATA5L1", "type": "synonym", "evidence": [ { "id": "F1SN45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN45/entry#names_and_taxonomy" } ] }, { "name": "Spermatogenesis-associated protein 5-like protein 1", "type": "synonym", "evidence": [ { "id": "F1SN45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN45/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "ATP-dependent chaperone part of the 55LCC heterohexameric ATPase complex which is chromatin-associated and promotes replisome proteostasis to maintain replication fork progression and genome stability. Required for replication fork progression, sister chromatid cohesion, and chromosome stability. The ATPase activity is specifically enhanced by replication fork DNA and is coupled to cysteine protease-dependent cleavage of replisome substrates in response to replication fork damage. Uses ATPase activity to process replisome substrates in S-phase, facilitating their proteolytic turnover from chromatin to ensure DNA replication and mitotic fidelity. Plays an essential role in the cytoplasmic maturation steps of pre-60S ribosomal particles by promoting the release of shuttling protein RSL24D1/RLP24 from the pre-ribosomal particles.", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45#function" }, { "database": "UniProtKB", "id": "ARBA00053521", "url": "https://www.uniprot.org/uniprotkb/ARBA00053521#function" }, { "database": "UniProtKB", "id": "A0A287BG18", "url": "https://www.uniprot.org/uniprotkb/A0A287BG18#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AFG2B", "url": "https://www.uniprot.org/uniprotkb/F1SN45", "locus": { "chromosome": "1", "start_pos": 126313402, "end_pos": 126335475, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004671", "url": "https://www.ensembl.org/id/ENSSSCG00000004671" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004671", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004671", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR003593", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003593", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003959", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003959", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003960", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003960", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041569", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041569", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050168", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050168", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "DRHIYVA", "url": "https://omabrowser.org/oma/group/DRHIYVA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR23077", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23077", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23077:SF194", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23077:SF194", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00004", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00004", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17862", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17862", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BG18", "url": "https://www.uniprot.org/uniprotkb/A0A287BG18", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BG18-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BG18-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN45-1", "url": "https://www.uniprot.org/uniprotkb/F1SN45-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRLHGKQAGKGTSLSNFLIGPFGLQSEARNRDSLALAHHLLPAEEHGVPAFVVRGEFLPHFPGRRVFSFAMAPDTGPFAEGPLLKLLPVDPGDQGTQRCRLGPAALRSLGAHLGSVVKISLPNGGSCLCTSWPRRDRADGFVQLDLQCASPGAAMGDPGARGSLSLSCLRLVPCPPLRRLAVWPALRERAGAPDSPNPAAVLEAAQELLRNRPVSLGHVVAAPPGTPGPVAALHIVSGAPSPDPAGLVTPRTHIGLSGVPPSESEPPPEVPLGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHALLHSGKNQDNPLIDEIDFLEAFKKIQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKTGCNVQERVLSVLLNELDGVGLKTIERRGSKSDQHGKYKELEKNEELEFQEVFNSNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAETCLFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSHKDLALYKNLFQKQGFSYIEDT", "length": 837, "header": "tr|F1SN45-1|F1SN45_PIG Isoform 1 of ATPase family gene 2 protein homolog B OS=Sus scrofa OX=9823 GN=AFG2B PE=1 SV=3 CANONICAL=F1SN45-1" }, "isoforms": [ { "isoform_ac": "A0A287BG18-1", "url": "https://www.uniprot.org/uniprotkb/F1SN45/entry#A0A287BG18-1", "sequence": { "sequence": "MRLHGKQAGKGTSLSNFLIGPFGLQSEARNRDSLALAHHLLPAEEHGVPAFVVRGEFLPHFPGRRVFSFAMAPDTGPFAEGPLLKLLPVDPGDQGTQRCRLGPAALRSLGAHLGSVVKISLPNGGSCLCTSWPRRDRADGFVQLDLQCASPGAAMGDPGARGSLSLSCLRLVPCPPLRRLAVWPALRERAGAPDSPNPAAVLEAAQELLRNRPVSLGHVVAAPPGTPGPVAALHIVSGAPSPDPAGLVTPRTHIGLSGVPPSESEPPPEVPLGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHALLHSGKNQDNPLIDEIDFLEAFKKIQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKTGCNVQERVLSVLLNELDGVGLKTIERRGSKSDQHGKYKELEKNEESRLSILRVCTKNMPVGPDVSLENLAAETCLFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSHKDLALYKNLFQKQGFSYIEDT", "length": 792, "header": "tr|A0A287BG18-1|A0A287BG18_PIG Computationally mapped isoform of ATPase family gene 2 protein homolog B OS=Sus scrofa OX=9823 GN=AFG2B PE=1 SV=1 CANONICAL=F1SN45-1" }, "locus": { "chromosome": "1", "start_pos": 126335391, "end_pos": 126314977, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066317.3", "url": "https://www.ensembl.org/id/ENSSSCT00000066317.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055000.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055000.1" } ] } }, { "isoform_ac": "F1SN45-1", "url": "https://www.uniprot.org/uniprotkb/F1SN45/entry#F1SN45-1", "sequence": { "sequence": "MRLHGKQAGKGTSLSNFLIGPFGLQSEARNRDSLALAHHLLPAEEHGVPAFVVRGEFLPHFPGRRVFSFAMAPDTGPFAEGPLLKLLPVDPGDQGTQRCRLGPAALRSLGAHLGSVVKISLPNGGSCLCTSWPRRDRADGFVQLDLQCASPGAAMGDPGARGSLSLSCLRLVPCPPLRRLAVWPALRERAGAPDSPNPAAVLEAAQELLRNRPVSLGHVVAAPPGTPGPVAALHIVSGAPSPDPAGLVTPRTHIGLSGVPPSESEPPPEVPLGGLAEAADSLRELLRLPLLYPRSFASLGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHALLHSGKNQDNPLIDEIDFLEAFKKIQPSSFRSVIGLMDVKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKTGCNVQERVLSVLLNELDGVGLKTIERRGSKSDQHGKYKELEKNEELEFQEVFNSNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAETCLFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSHKDLALYKNLFQKQGFSYIEDT", "length": 837, "header": "tr|F1SN45-1|F1SN45_PIG Isoform 1 of ATPase family gene 2 protein homolog B OS=Sus scrofa OX=9823 GN=AFG2B PE=1 SV=3 CANONICAL=F1SN45-1" }, "locus": { "chromosome": "1", "start_pos": 126335391, "end_pos": 126314977, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005157.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005157.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005031.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005031.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 226, "start_aa": "Thr", "end_pos": 226, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr226", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A7N9VSG0-1", "protein_name": "ATPase family gene 2 protein homolog B", "gene_name": "Afg2b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAPDSGPFPDGQLLKLLPVDPRDRDTQRCRLGPAAFRSLGARLGSPLRISLPAGGCCLCTAWPRRDRVDGFVQLDPQCASPGARVATGRIGMDCLQPVPCPPLRRLEVWPVLRPQAGAPSSAAVLEVVHELLRNRPVSRGHVVTTPPGVPGPVAALHVMGGTPDPEPGGWVTPHTRITLSDKPPPQVEPPGEVTLGGLSETADSLRELLRLPLRYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGSRPGETEENVRRIFQRAQELASRGPSLLFLDEVDALCPRRGGPHRAPESRVVAQVLTLLDGIHRDREFVVVGATNRPDELDPALRRPGRFDREVVIGTPTLKQREAILQVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAAMCALLKNEKNQDSPKIEETDFLEAFKKIQPSSFRSSTGLMDIKPVGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATGCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGTSGCDARERVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGRLDKIIYVPPPDQEGRLSILKVCTNNMPVGPDVSLENLAAETCFFSGADLRNLCKEAALFALQENGLEATTVRQEHFTEALKTVKPSLTLKELTFYENLFKKGLSNLEDD", "length": 747 }, "evidence": [ { "id": "F1SN45", "url": "https://omabrowser.org/oma/group/F1SN45/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7YSY2-1", "protein_name": "ATPase family gene 2 protein homolog B", "gene_name": "AFG2B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAPDSGSFPEGPPLKLLPVDTRDRGTQRCRLGPTALRALGAHLGSAVKISLPDGGSCLCTAWPRRDGADGFVQLDPQCTSPGSAVGAPGSGGIINLNRLRLVPCPPLRSLAVWPELREQAGASGAPSPAAVLEAVQELLRNRPVSQGYVVAAPPGAPGPVAALHIVSGAPSPNPAGLVTPRTHISLSEVPPSEEEPQPEVPLGGLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKKIQPSSFRSVIGVTDIKPVGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHGKCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFLESLKTVKPSLSHKDLTLYKNLFQKKEFSILEDI", "length": 767 }, "evidence": [ { "id": "F1SN45", "url": "https://omabrowser.org/oma/group/F1SN45/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D4A2B7-1", "protein_name": "ATPase family gene 2 protein homolog B", "gene_name": "Afg2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAPDSGPFPDGQFLKLLPVDPRDRGTQRCRLGPAAFRSLGVRLGSPMRISLPAGGCCLCTAWPRRDGADGFVQLDLQCASPGAAAAAGRISMDRLQPVSCPPLRRLEVWPVLRPQAGAPSSDAVLEVSQELLRNRPVSRGHVVATPPGIPGPVAALHVVSGTPDPEPAGRVTPHTRITLSDKPPPQVEPPGEVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRRGGPQRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKNEKNQNNPKIEETDFLEAFKKVQPSSFRSSIGLTDIRPVGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDARERVLSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENLAAETCYFSGADLRNLCKEAALFALQENGLEATTVEQEHFTEALKTVKPSLTLKDLTFYENLFKKELSNLEDH", "length": 747 }, "evidence": [ { "id": "F1SN45", "url": "https://omabrowser.org/oma/group/F1SN45/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1Q8W3-1", "protein_name": "ATPase family gene 2 protein homolog B", "gene_name": "afg2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKALQVLPVDAVDVDTQRCRMGPALMSSLGLRLGSPVLIRVLQGTCLCTAWPRRDLADGYLQISSQCVSPDLHKHTLTALTVHPAQIKPLTCLKLTCVKLKVFVQRLEHKKRVSERSLQELLDGIYVHEGHLVDLSGVKAEIRCVLVEKVNSGSQRAGLITARTCVDISTIQTVKHLDRQQQQVSAAPLGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPENRLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRHSQMGASEPVSMQHFMQALRHVQPSCLRSSIGATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVRTLERRSTCRKIALLEGGDQEDVRLHQMELQEVCNKDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLAAQTELFSGADLENLCKEAALLALREDGLAVSCVRQKYFLKALQMLSPSLSAEQLQQNIHAALQ", "length": 748 }, "evidence": [ { "id": "F1SN45", "url": "https://omabrowser.org/oma/group/F1SN45/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "P32794-1", "protein_name": "ATPase family gene 2 protein", "gene_name": "AFG2", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAPKSSSSGSKKKSSASSNSADAKASKFKLPAEFITRPHPSKDHGKETCTAYIHPNVLSSLEINPGSFCTVGKIGENGILVIARAGDEEVHPVNVITLSTTIRSVGNLILGDRLELKKAQVQPPYATKVTVGSLQGYNILECMEEKVIQKLLDDSGVIMPGMIFQNLKTKAGDESIDVVITDASDDSLPDVSQLDLNMDDMYGGLDNLFYLSPPFIFRKGSTHITFSKETQANRKYNLPEPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFKGIARGITPEMLSYYEEFALRSGSSS", "length": 780 }, "evidence": [ { "id": "F1SN45", "url": "https://omabrowser.org/oma/group/F1SN45/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q9BVQ7-1", "protein_name": "ATPase family gene 2 protein homolog B", "gene_name": "AFG2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAPDSDPFPEGPLLKLLPLDARDRGTQRCRLGPAALHALGARLGSAVKISLPDGGSCLCTAWPRRDGADGFVQLDPLCASPGAAVGASRSRRSLSLNRLLLVPCPPLRRVAVWPVLRERAGAPGARNTAAVLEAAQELLRNRPISLGHVVVAPPGAPGLVAALHIVGGTPSPDPAGLVTPRTRVSLGGEPPSEAQPQPEVPLGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDALCPQRGSRAPESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRSVIGLMDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPSLSCKDLALYENLFKKEGFSNVEGI", "length": 753 }, "evidence": [ { "id": "F1SN45", "url": "https://omabrowser.org/oma/group/F1SN45/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9ZPR1-1", "protein_name": "Cell division control protein 48 homolog B", "gene_name": "CDC48B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MLETESSVCDNIAGNEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEEVETYSSFRKAAKRSDSKPIPINKKKATSTVFGFSWQLGVLSLLLLATGNYYFNHTKHELLVASAT", "length": 603 }, "evidence": [ { "id": "F1SN45", "url": "https://omabrowser.org/oma/group/F1SN45/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "autophagosome maturation", "id": "GO:0097352", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097352", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "ribosomal large subunit biogenesis", "id": "GO:0042273", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042273", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "DNA replication", "id": "GO:0006260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006260", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "mitotic spindle disassembly", "id": "GO:0051228", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051228", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "retrograde protein transport, ER to cytosol", "id": "GO:0030970", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030970", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "regulation of ribosome biogenesis", "id": "GO:0090069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090069", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "ribosome biogenesis", "id": "GO:0042254", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042254", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "preribosome binding", "id": "GO:1990275", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990275", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "polyubiquitin modification-dependent protein binding", "id": "GO:0031593", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031593", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "ATP hydrolysis activity", "id": "GO:0016887", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016887", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "VCP-NPL4-UFD1 AAA ATPase complex", "id": "GO:0034098", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034098", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "spindle", "id": "GO:0005819", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005819", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SN45", "url": "https://www.uniprot.org/uniprotkb/F1SN45" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SN45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN45" }, { "id": "SM00382", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00382" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AAA+ ATPase", "eco_id": "ECO_0000259", "start_pos": 303, "end_pos": 442, "start_aa": "Val", "end_aa": "Thr", "glycosite_overlap": "" } ], 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"32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515587", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515587", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F1SN50", "url": "https://www.uniprot.org/uniprotkb/F1SN50" } ], "pmid": "" }, { "name": "nuclear inner membrane", "id": "GO:0005637", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005637", "evidence": [ { "database": "UniProtKB", "id": "F1SN50", "url": "https://www.uniprot.org/uniprotkb/F1SN50" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SN50-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 431, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SN50-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SN50" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SN51-1", "uniprot_ac": "F1SN51", "uniprot_id": "F1SN51_PIG", "mass": { "chemical_mass": 44501.0, "monoisotopic_mass": 44501.0 }, "refseq": { "ac": "NP_001231941", "name": "inositol polyphosphate 1-phosphatase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231941" }, "gene_names": [ { "name": "INPP1", "type": "recommended", "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51" } ] }, { "name": "INPP1", "type": "synonym", "evidence": [ { "id": "NP_001231941", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231941" } ] } ], "protein_names": [ { "name": "Inositol polyphosphate 1-phosphatase", "type": "recommended", "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51/entry#names_and_taxonomy" } ] }, { "name": "3.1.3.57", "type": "synonym", "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51/entry#names_and_taxonomy" } ] }, { "name": "inositol polyphosphate 1-phosphatase", "type": "synonym", "evidence": [ { "id": "NP_001231941", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231941" } ] } ], "function": [ { "annotation": "Mg(2+)-dependent phosphatase that catalyzes the hydrolysis of the 1-position phosphate from inositol 1,4-bisphosphate and inositol 1,3,4-trisphosphate and participates in inositol phosphate metabolism.", "evidence": [ { "database": "UniProtKB", "id": "F1SN51", "url": "https://www.uniprot.org/uniprotkb/F1SN51#function" }, { "database": "UniProtKB", "id": "ARBA00059706", "url": "https://www.uniprot.org/uniprotkb/ARBA00059706#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SN51", "url": "https://www.uniprot.org/uniprotkb/F1SN51" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "INPP1", "url": "https://www.uniprot.org/uniprotkb/F1SN51", "locus": { "chromosome": "15", "start_pos": 94987279, "end_pos": 94956532, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016050", "url": "https://www.ensembl.org/id/ENSSSCG00000016050" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016050", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016050", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01640", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01640", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100514878", "url": "https://www.ncbi.nlm.nih.gov/gene/100514878", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000760", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000760", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020550", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020550", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020583", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020583", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044897", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044897", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050725", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050725", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514878", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514878", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "KGSTFRW", "url": "https://omabrowser.org/oma/group/KGSTFRW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SN51", "url": "https://www.orthodb.org/?gene=F1SN51", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR43028", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43028", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR43028:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR43028:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00459", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00459", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1855183", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1855183", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001231941", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231941", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "15553", "url": "https://www.rhea-db.org/rhea/15553", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "70319", "url": "https://www.rhea-db.org/rhea/70319", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SN51", "url": "https://www.uniprot.org/uniprotkb/F1SN51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN51-1", "url": "https://www.uniprot.org/uniprotkb/F1SN51-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDILRELLCVSEKAANIARACRQQEALFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKQNMENKFPGLGKKIFGEESNEFTNDLGEKIIMRLCPTEEETVDLLNKVLNGNKLASEALAKVVHQDVVFTDPALDLVEINIPQDILGIWVDPIDSTYQYIKGSADIKSNQGIFPSGLQCVTILIGVYDIHTGVPLMGVINQPFVSQDLNTLRWKGQCYWGLSYMGTNIHSLLPSISTRNSRETQSQEPKPLRSEAECPHPFSAVISTSEKETIKTALSQVCGERVFRAAGAGYKSLCVVLGLVDIYIFSEDTTFKWDSCAAHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSKKQLEGFLSRLFQYLGPADAYT", "length": 402, "header": "tr|F1SN51-1|F1SN51_PIG Isoform 1 of Inositol polyphosphate 1-phosphatase OS=Sus scrofa OX=9823 GN=INPP1 PE=1 SV=1 CANONICAL=F1SN51-1" }, "isoforms": [ { "isoform_ac": "F1SN51-1", "url": "https://www.uniprot.org/uniprotkb/F1SN51/entry#F1SN51-1", "sequence": { "sequence": "MSDILRELLCVSEKAANIARACRQQEALFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKQNMENKFPGLGKKIFGEESNEFTNDLGEKIIMRLCPTEEETVDLLNKVLNGNKLASEALAKVVHQDVVFTDPALDLVEINIPQDILGIWVDPIDSTYQYIKGSADIKSNQGIFPSGLQCVTILIGVYDIHTGVPLMGVINQPFVSQDLNTLRWKGQCYWGLSYMGTNIHSLLPSISTRNSRETQSQEPKPLRSEAECPHPFSAVISTSEKETIKTALSQVCGERVFRAAGAGYKSLCVVLGLVDIYIFSEDTTFKWDSCAAHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSKKQLEGFLSRLFQYLGPADAYT", "length": 402, "header": "tr|F1SN51-1|F1SN51_PIG Isoform 1 of Inositol polyphosphate 1-phosphatase OS=Sus scrofa OX=9823 GN=INPP1 PE=1 SV=1 CANONICAL=F1SN51-1" }, "locus": { "chromosome": "15", "start_pos": 94987105, "end_pos": 94974419, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017475.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017475.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017004.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017004.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SN51", "url": "https://www.uniprot.org/uniprotkb/F1SN51" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514878", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514878", "resource": "KEGG Pathway" }, { "id": "R-SSC-1855183", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1855183", "resource": "Reactome", "description": "Synthesis of IP2, IP, and Ins in the cytosol" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8N7TAF6-1", "protein_name": "Inositol polyphosphate 1-phosphatase", "gene_name": "inpp1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADLLRCLLNVAEKAANVARVCRQEAPLFELLVQEKTGADKNKKFVQDFKTLADVVIQEMIRHDVCAQFPELTGFIQGEESNKFENGLGESVTVTVCAQQEDTTALLAKVLDGDQTAASLLSEVIHQDLQLQDQTAESLQISISPADVGIWIDPIDGTSQYIEGKEEEEPDEGFCVSGLPCALVLIGVYLRATGQPVMGVINQPFNRKDSTGKGWKGQYVWGVSYEDVNVCSLTQRRQSLAQKSEHLSVLLSSSERREVKDALAALSNGSLMFASGAGYKILCVLQGLADVYVLSEGSTFKWDSCAPHAILRALGGGVSDLSACMQAKNTGYASEITYHQPSGDHQSHGVDRWANQGGIIAYLDSSVIEKVIAVLAGKI", "length": 379 }, "evidence": [ { "id": "F1SN51", "url": "https://omabrowser.org/oma/group/F1SN51/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0ABK0LV86-1", "protein_name": "Inositol polyphosphate 1-phosphatase", "gene_name": "Inpp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLTGQAKQEREETRTWHTGYTDDTCMKFNLHSTESQRVGEAEEKALEMSDILLELLRVSEKAANIARACRQQEALFQLLIEEKKGAEKNKKFAADFKTLADVLVQEVIKQNMENKFPGLGKKVFGEESNEFTNDLGEKITVELQSTEKETAELLSRVLNGNMLASEALAKVVHEDVDLTDPTLESLEISIPQEILGIWVDPIDSTYQYIKGSANVKSNQGVFPSGLQCVTILIGVYDLQTGLPLMGVINQPFASQNLTTLRWTGQCYWGLSYMGNNIHSLQLAISKSNSETQTENSDRESSNPFSAVISTSEKDTIKTALSDVCGGSVFPAAGAGYKSLCVVQGLADIYIFSEDTTYKWDSCAAHAILRAMGGGIVDMKECLERSPDTGLDLPQLLYHVENKGASGVDLWANKGGLIAYRSRNRLDTFLSRLIQSLGPLKTQT", "length": 443 }, "evidence": [ { "id": "F1SN51", "url": "https://omabrowser.org/oma/group/F1SN51/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21327-1", "protein_name": "Inositol polyphosphate 1-phosphatase", "gene_name": "INPP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSDILQELLRVSEKAANIARACRQQETLFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKENMENKFPGLGKKIFGEESNEFTNDLGEKIIMRLGPTEEETVALLSKVLNGNKLASEALAKVVHQDVFFSDPALDSVEINIPQDILGIWVDPIDSTYQYIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVINQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQGTQNPSSEGSCRFSVVISTSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCAAHAILRAMGGGMVDLKECLERNPDTGLDLPQLVYHVGNEGAAGVDQWANKGGLIAYRSEKQLETFLSRLLQHLAPVATHT", "length": 400 }, "evidence": [ { "id": "F1SN51", "url": "https://omabrowser.org/oma/group/F1SN51/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P49441-1", "protein_name": "Inositol polyphosphate 1-phosphatase", "gene_name": "INPP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSDILRELLCVSEKAANIARACRQQEALFQLLIEEKKEGEKNKKFAVDFKTLADVLVQEVIKQNMENKFPGLEKNIFGEESNEFTNDWGEKITLRLCSTEEETAELLSKVLNGNKVASEALARVVHQDVAFTDPTLDSTEINVPQDILGIWVDPIDSTYQYIKGSADIKSNQGIFPCGLQCVTILIGVYDIQTGVPLMGVINQPFVSRDPNTLRWKGQCYWGLSYMGTNMHSLQLTISRRNGSETHTGNTGSEAAFSPSFSAVISTSEKETIKAALSRVCGDRIFGAAGAGYKSLCVVQGLVDIYIFSEDTTFKWDSCAAHAILRAMGGGIVDLKECLERNPETGLDLPQLVYHVENEGAAGVDRWANKGGLIAYRSRKRLETFLSLLVQNLAPAETHT", "length": 399 }, "evidence": [ { "id": "F1SN51", "url": "https://omabrowser.org/oma/group/F1SN51/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P49442-1", "protein_name": "Inositol polyphosphate 1-phosphatase", "gene_name": "Inpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDILLELLCVSEKAANIARACRQQETLFQLLIEEKKGAEKNKKFAADFKTLADVLVQEVIKQNMENKFPGLGKKVFGEESNEFTNDLGEKITVELQSTEEETAELLSKVLNGNMPASEALAQVVHEDVDLTDPTLESLDISIPHESLGIWVDPIDSTYQYIKGSANVKSNQGIFPSGLQCVTILIGVYDLQTGLPLMGVINQPFASQNLTTLRWKGQCYWGLSYMGTNIHSLQLAISKSDSETQTENSDREFSSPFSAVISTSEKDTIKAALSRVCGGSVFPAAGAGYKSLCVIQGLADIYIFSEDTTYKWDSCAAHAILRAMGGGIVDMKECLERSPDTGLDLPQLLYHVENKGASGVELWANKGGLIAYRSRNRLDTFLSRLIQNLGPVKTQA", "length": 396 }, "evidence": [ { "id": "F1SN51", "url": "https://omabrowser.org/oma/group/F1SN51/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VFP6-1", "protein_name": "3.1.3.57", "gene_name": "Ipp", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSGVEEQASLLRVLINCAEKAANIARICRSNEQLLALLVQEKIGSEANERFEHDFKTLADVLIQETIKHEVGALFPAMKDAILGEESPNFTNQLGESVTIAVGATEEDTAACLQAVLSGHEDAASALATEVHRDVSFSSEKLGEIAQLPDELDYGNLGIWIDPIDATAEYISGDTMFTDFPGITSTGLDCVTVLIGVYERDTGVPVMGVVAQPFGEKLEENVYSSSMFWGVCLPTVRAHNCDFEARDENRRLGIFSSSEQSDILQRFLDLGYEFAFSAGAGHKALKVITHEVDVYLLSKGSTFKWDTCAPQAILRALGGDVLDYAASVAEQKAVPLKYLIEDAEADADWKRNAGGIISVRNVDVVDELLAKLAEQ", "length": 375 }, "evidence": [ { "id": "F1SN51", "url": "https://omabrowser.org/oma/group/F1SN51/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "inositol-1,4-bisphosphate 1-phosphatase activity", "id": "GO:0004441", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004441", "evidence": [ { "database": "UniProtKB", "id": "F1SN51", "url": "https://www.uniprot.org/uniprotkb/F1SN51" } ], "pmid": "" }, { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "F1SN51", "url": "https://www.uniprot.org/uniprotkb/F1SN51" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "phosphatidylinositol phosphate biosynthetic process", "id": "GO:0046854", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046854", "evidence": [ { "database": "UniProtKB", "id": "F1SN51", "url": "https://www.uniprot.org/uniprotkb/F1SN51" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "15553", "name": "", "equation": "1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "15553", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/15553" } ] }, { "id": "70319", "name": "", "equation": "1D-myo-inositol 1,3,4-trisphosphate + H2O = 1D-myo-inositol 3,4-bisphosphate + phosphate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "70319", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/70319" } ] }, { "id": "R-SSC-1855208", "name": "I(1,4)P2 is dephosphorylated to I4P by INPP1 in the cytosol", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-1629739" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1855208", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1855208" } ] }, { "id": "R-SSC-1855232", "name": "I(1,3,4)P3 is dephosphorylated to I(3,4)P2 by INPP1 in the cytosol", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "cytosol", "input_participant_list": [ "R-ALL-994123" ], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1855232", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1855232" } ] } ], "reaction_participants": [ { "participant_id": "R-ALL-1629739", "participant_name": "I(1,4)P2 [cytosol]", "crossref": [ { "id": "58282", "database": "ChEBI", "url": "" }, { "id": "5098", "database": "Guide to Pharmacology - Ligands", "url": "" }, { "id": "ZINC000100016166", "database": "ZINC", "url": "" }, { "id": "C01220", "database": "COMPOUND", "url": "" } ] }, { "participant_id": "R-ALL-994123", "participant_name": "I(1,3,4)P3 [cytosol]", "crossref": [ { "id": "58414", "database": "ChEBI", "url": "" }, { "id": "ZINC000004095596", "database": "ZINC", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [ { "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51#function" }, { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51" }, { "id": "PIRSR600760-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR600760-2" } ], "binding_site_uniprot": 153, "amino_acid": "Asp", "chebi_lig_id": "CHEBI_18420", "ligand": "Mg(2+)", "ligand_label": "1", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 153, "end_pos": 153, "start_aa": "Asp", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51#function" }, { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51" }, { "id": "PIRSR600760-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR600760-2" } ], "binding_site_uniprot": 155, "amino_acid": "Ile", "chebi_lig_id": "CHEBI_18420", "ligand": "Mg(2+)", "ligand_label": "1", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 155, "end_pos": 155, "start_aa": "Ile", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51#function" }, { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51" }, { "id": "PIRSR600760-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR600760-2" } ], "binding_site_uniprot": 156, "amino_acid": "Asp", "chebi_lig_id": "CHEBI_18420", "ligand": "Mg(2+)", "ligand_label": "1", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 156, "end_pos": 156, "start_aa": "Asp", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51#function" }, { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51" }, { "id": "PIRSR600760-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR600760-2" } ], "binding_site_uniprot": 319, "amino_acid": "Asp", "chebi_lig_id": "CHEBI_18420", "ligand": "Mg(2+)", "ligand_label": "1", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 319, "end_pos": 319, "start_aa": "Asp", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51#function" }, { "id": "F1SN51", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN51" }, { "id": "PIRSR600760-2", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR600760-2" } ], "binding_site_uniprot": 79, "amino_acid": "Glu", "chebi_lig_id": "CHEBI_18420", "ligand": "Mg(2+)", "ligand_label": "1", "uniprotkb_ligand_comment": "catalytic", "eco_id": "ECO_0000256", "start_pos": 79, "end_pos": 79, "start_aa": "Glu", "end_aa": "Glu", "glycosite_overlap": "" } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SN58-1", "uniprot_ac": "F1SN58", "uniprot_id": "F1SN58_PIG", "mass": { "chemical_mass": 50125.0, "monoisotopic_mass": 50125.0 }, "refseq": { "ac": "NP_001231167", "name": "sulfide:quinone oxidoreductase, mitochondrial", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231167" }, "gene_names": [ { "name": "SQOR", "type": "recommended", "evidence": [ { "id": "F1SN58", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ] }, { "name": "SQOR", "type": "synonym", "evidence": [ { "id": "NP_001231167", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231167" } ] }, { "name": "SQRDL", "type": "synonym", "evidence": [ { "id": "NP_001231167", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231167" } ] } ], "protein_names": [ { "name": "Sulfide:quinone oxidoreductase, mitochondrial", "type": "recommended", "evidence": [ { "id": "F1SN58", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN58/entry#names_and_taxonomy" } ] }, { "name": "1.8.5.8", "type": "synonym", "evidence": [ { "id": "F1SN58", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN58/entry#names_and_taxonomy" } ] }, { "name": "Sulfide quinone oxidoreductase", "type": "synonym", "evidence": [ { "id": "F1SN58", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN58/entry#names_and_taxonomy" } ] }, { "name": "sulfide quinone reductase-like", "type": "synonym", "evidence": [ { "id": "NP_001231167", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231167" } ] }, { "name": "sulfide:quinone oxidoreductase, mitochondrial", "type": "synonym", "evidence": [ { "id": "NP_001231167", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231167" } ] } ], "function": [ { "annotation": "Catalyzes the oxidation of hydrogen sulfide with the help of a quinone, such as ubiquinone-10, giving rise to thiosulfate and ultimately to sulfane (molecular sulfur) atoms. Requires an additional electron acceptor; can use sulfite, sulfide or cyanide (in vitro). It is believed the in vivo electron acceptor is glutathione.", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58#function" }, { "database": "UniProtKB", "id": "ARBA00059167", "url": "https://www.uniprot.org/uniprotkb/ARBA00059167#function" }, { "database": "UniProtKB", "id": "A0A286ZL94", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL94#function" }, { "database": "UniProtKB", "id": "A0A287BF08", "url": "https://www.uniprot.org/uniprotkb/A0A287BF08#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SQOR", "url": "https://www.uniprot.org/uniprotkb/F1SN58", "locus": { "chromosome": "1", "start_pos": 126076161, "end_pos": 126137062, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004666", "url": "https://www.ensembl.org/id/ENSSSCG00000004666" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004666", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004666", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154990", "url": "https://www.ncbi.nlm.nih.gov/gene/100154990", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR015904", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015904", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023753", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023753", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036188", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036188", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154990", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154990", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ERYSMFI", "url": "https://omabrowser.org/oma/group/ERYSMFI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SN58", "url": "https://www.orthodb.org/?gene=F1SN58", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10632", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10632", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10632:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10632:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07992", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07992", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1614517", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1614517", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001231167", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231167", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "38359", "url": "https://www.rhea-db.org/rhea/38359", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "55156", "url": "https://www.rhea-db.org/rhea/55156", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "62608", "url": "https://www.rhea-db.org/rhea/62608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A286ZL94", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZL94-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZL94-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BF08", "url": "https://www.uniprot.org/uniprotkb/A0A287BF08", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BF08-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BF08-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN58-1", "url": "https://www.uniprot.org/uniprotkb/F1SN58-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSLATVASGPRTRLFACFLRLGTQQVSPLQLHTGTNLAAKNHYEVLVLGGGSGGITMAARMKRRVGAENVAIVEPSERHFYQPIWTLVGAGIKQLSSSGRPTASVIPSGVEWIKARVVDLNPDKNCIHTDNGKEISYRYLIIALGIQLDYEKIKGLPEGFDHPKIGSNYSFRTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGRRSKANIIFNTSLGAIFGVKKYADALQEIIRERNLTINYKQNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGWVDVDKDTLQHKRYPNVFGIGDCTNLPTSKTAAAVAAQSGVLDRTISLIMKNQTPTKKYDGYTSCPLVTGYNRVILAEFDYNAKPLETFPFDQSKERLSMYLMKANMMPFLYWNGMLRGYWGGPAFLRKLFHLGMS", "length": 450, "header": "tr|F1SN58-1|F1SN58_PIG Isoform 1 of Sulfide:quinone oxidoreductase, mitochondrial OS=Sus scrofa OX=9823 GN=SQOR PE=1 SV=3 CANONICAL=F1SN58-1" }, "isoforms": [ { "isoform_ac": "A0A286ZL94-1", "url": "https://www.uniprot.org/uniprotkb/F1SN58/entry#A0A286ZL94-1", "sequence": { "sequence": "MLPYTQPYLFLSSLIQPKDDLTGHCGICGGITMAARMKRRVGAENVAIVEPSERHFYQPIWTLVGAGIKQLSSSGRPTASVIPSGVEWIKARVVDLNPDKNCIHTDNGKEISYRYLIIALGIQLDYEKIKGLPEGFDHPKIGSNYSFRTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGRRSKANIIFNTSLGAIFGVKKYADALQEIIRERNLTINYKQNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGWVDVDKDTLQHKRYPNVFGIGDCTNLPTSKTAAAVAAQSGVLDRTISLIMKNQTPTKKYDGYTSCPLVTGYNRVILAEFDYNAKPLETFPFDQSKERLSMYLMKANMMPFLYWNGMLRGYWGGPAFLRKLFHLGMS", "length": 425, "header": "tr|A0A286ZL94-1|A0A286ZL94_PIG Computationally mapped isoform of Sulfide:quinone oxidoreductase, mitochondrial OS=Sus scrofa OX=9823 GN=SQOR PE=1 SV=2 CANONICAL=F1SN58-1" }, "locus": { "chromosome": "1", "start_pos": 126114505, "end_pos": 126078604, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041165.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041165.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032235.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032235.2" } ] } }, { "isoform_ac": "A0A287BF08-1", "url": "https://www.uniprot.org/uniprotkb/F1SN58/entry#A0A287BF08-1", "sequence": { "sequence": "MTSLATVASGPRTRLFACFLRLGTQQVSPLQLHTGTNLAAKNHYEVLVLGGGSGGITMAARMKRRVGAENVAIVEPSERHFYQPIWTLVGAGIKQLSSSGRPTASVIPSGVEWIKARVVDLNPDKNCIHTDNGKEISYRYLIIALGIQLDYEKIKGLPEGFDHPKIGSNYSFRTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGRRSKANIIFNTSLGAIFGVKKYADALQEIIRERNLTINYKQNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGWVDVDKDTLQHKRYPNVFGIGDCTNLPTSKTAAAVAAQSGVLDRTISLIMKNQTPTKKGLLGRTSLSAEVVPSGYELRMA", "length": 394, "header": "tr|A0A287BF08-1|A0A287BF08_PIG Computationally mapped isoform of Sulfide:quinone oxidoreductase, mitochondrial OS=Sus scrofa OX=9823 GN=SQOR PE=3 SV=1 CANONICAL=F1SN58-1" }, "locus": { "chromosome": "1", "start_pos": 126114450, "end_pos": 126078593, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058560.2", "url": "https://www.ensembl.org/id/ENSSSCT00000058560.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055142.1", "url": "https://www.ensembl.org/id/ENSSSCP00000055142.1" } ] } }, { "isoform_ac": "F1SN58-1", "url": "https://www.uniprot.org/uniprotkb/F1SN58/entry#F1SN58-1", "sequence": { "sequence": "MTSLATVASGPRTRLFACFLRLGTQQVSPLQLHTGTNLAAKNHYEVLVLGGGSGGITMAARMKRRVGAENVAIVEPSERHFYQPIWTLVGAGIKQLSSSGRPTASVIPSGVEWIKARVVDLNPDKNCIHTDNGKEISYRYLIIALGIQLDYEKIKGLPEGFDHPKIGSNYSFRTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGRRSKANIIFNTSLGAIFGVKKYADALQEIIRERNLTINYKQNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGWVDVDKDTLQHKRYPNVFGIGDCTNLPTSKTAAAVAAQSGVLDRTISLIMKNQTPTKKYDGYTSCPLVTGYNRVILAEFDYNAKPLETFPFDQSKERLSMYLMKANMMPFLYWNGMLRGYWGGPAFLRKLFHLGMS", "length": 450, "header": "tr|F1SN58-1|F1SN58_PIG Isoform 1 of Sulfide:quinone oxidoreductase, mitochondrial OS=Sus scrofa OX=9823 GN=SQOR PE=1 SV=3 CANONICAL=F1SN58-1" }, "locus": { "chromosome": "1", "start_pos": 126114450, "end_pos": 126078604, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005152.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005152.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005026.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005026.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154990", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154990", "resource": "KEGG Pathway" }, { "id": "R-SSC-1614517", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1614517", "resource": "Reactome", "description": "Sulfide oxidation to sulfate" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MSC4-1", "protein_name": "Sulfide:quinone oxidoreductase, mitochondrial", "gene_name": "Sqor", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MMAPLVTAVSSPRARLFACFLRLGTQQAALLQLHTGACCTAKNHYEVLVLGGGSGGITMAARMKRKVGAENVAIVEPSERHFYQPIWTLVGAGAKQLSLSGRSTASVIPSGVEWIQDRVAELNPDKNCIRTDNGKEISYKYLIIALGIQLDYEKIKGLPEGFAYPKIGSNYSVKTVEKTWKALQDFKEGNAVFTFPNTPVKCAGAPQKIMYLSEAYFRKTGKRPKANVIFNTALGTIFGVKKYAAALQEIIRERDLTVNYKHNLIEVRADKQEAVFENLDKPGEIKVIQYEMLHVTPPMSSPDVLKTSPVADSAGWVDVDKDTLQHKKYPNVFGIGDCTNLPTSKTAAAVAAQSGILDRTISLIMKNQRPTKKYDGYTSCPLVTGYNRVILAEFNYSAEPLETFPFDQSKERLSMYFMKADMMPFLYWNMMLRGYWGGPAFLRKLFHLGMS", "length": 451 }, "evidence": [ { "id": "F1SN58", "url": "https://omabrowser.org/oma/group/F1SN58/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0YSC1-1", "protein_name": "Sulfide:quinone oxidoreductase, mitochondrial", "gene_name": "SQOR", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSPVGAAFSFSCLRPGVWLLKPGIQKKSSLGFHTAARCAAKDYYEVLVLGGGSGGITMSARMKRKVGAGNVAVVEPSKTHYYQPLWTLVGAGAKQLSASARPTESVMPEGVEWIKSRVTALDPDKNCVRLENDVKISYKYLIIALGISLHYEKIKGLPEGFHHPKIGSNYSVHTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYWRKTGKRPKANIMFNTSLGVIFGVKKYADALLKIIEERNIAVNYKCNLIEVRADKQEAVFENLDKPGETEVHQVRKFQYEMLHVTPPMGPPDVLINSPVSDEIGWVDVNKETLQHKKYPNIFGIGDCTNLPTSRTAAAVAAQSGVLDKTISLVMKNQSPTKKYDGYTSCPLVTSYNKVILAEFDYNAQPLETFPIDQSKQRTSMYHMKADMMPFLYWNALLKGYWGGPAPIRKLMHLGLK", "length": 455 }, "evidence": [ { "id": "F1SN58", "url": "https://omabrowser.org/oma/group/F1SN58/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1MKF8-1", "protein_name": "Sulfide:quinone oxidoreductase, mitochondrial", "gene_name": "SQOR", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTLLASVVSCSRVRLFACFLRLGSQQASPLQLHTGASLAAKSYYEVLVLGGGSGGISMAARMKRKVGAENVAIVEPSETHFYQPIWTLVGAGAKPLSSSGRPTANVIPSGVEWIKARVVDLNPDKNCIHTDDDKKISYKYLIIALGIQLDYEKIKGLPEGFAHPKIGSNYSVRTVEKTWKALQDFKEGNAIFTFPNTPVKCAGAPQKIMYLSEAYFRKTGKRPKANIIFNTSLGAIFGVKKYADALQKIIQERALTVNYKQNLIEVRADKQEAVFENLDKPGETQVISYEMLHVTPPMSPPDVLKTSPVADAAGWVDVDKDTLQHKRYPNVFGIGDCTNLPTSKTAAAVAAQSGILDRTISLIMKNQTPVKKYDGYTSCPLVTGYNRVILAEFNYNAEPLETFPFDQSKERLSMYLMKADMMPFLYWNLMLRGYWGGPAFLRKLFHLGKS", "length": 450 }, "evidence": [ { "id": "F1SN58", "url": "https://omabrowser.org/oma/group/F1SN58/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54DK1-1", "protein_name": "Sulfide:quinone oxidoreductase, mitochondrial", "gene_name": "sqor", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFKSIMYALAVAPAVTSSSDKLPNGVVSASQLGSEKEKRKLKNVTKIVIVGGGAGGLSVASQLEHKFKNKGDIVIVEPSEKHYYQPLWTLVGGGIFSRKDSEKDEKDFIPKGATWVKDSVTVFKPEENIVLTKDGKEIDYDYLVVSTGLELYWDRVKGLKENLGKNGVTSNYSYDSCEKTFEFIKSLKPGNVAIFTVPTTGVKCGGAPQKILWLCDDYLRKHGIRDKVRLDFNSAGASMFPVKKYSEVLDKMAKERGVNQNFAHNLVEIKGDSKEAVFETPQGNKTVKYDMIHVVPPMGPHSVIKNSPLADPATGFVNVDKGTLQHVKYDNVFSLGDTSNLPTSKTAAAITSQAPILVGNLINHKLGLPLNHKYDGYTSCPITTSYSKIILAEFKYGFEVDESLPFDQSKESYFPMFLKKYVFPTAYWEGMLKGRWFGKNTLFNPIKTPEIN", "length": 452 }, "evidence": [ { "id": "F1SN58", "url": "https://omabrowser.org/oma/group/F1SN58/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9R112-1", "protein_name": "Sulfide:quinone oxidoreductase, mitochondrial", "gene_name": "Sqor", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAPLVTVVSSPRARLFACFLRLGTQQAGPLQLHTGACCTAKNHYEVLVLGGGAGGITMATRMKRRVGAENVAIVEPSERHFYQPIWTLVGAGAKELSLSVRSTLSVIPSGVQWIQDRVAELNPDENCIRTDSGKEISYRYLIIALGIQLDYEKIKGLPEGFAYPKIGSNYSVKTVEKTWKALQGFKEGNALFTFPNTPVKCAGAPQKIMYLSEAYFRKTGKRPKANIIFNTALGTIFGVKKYADALQEIIRERDVSVNYKHNLIEVRPDKQEAVFEILDKPGETHVIPYEMLHVTPPMSAPDVLKRSPVADSAGWVDVDKETLQHKKYPNVFGIGDCTNLPTSKTAAAVAAQSGILDRTMCLIMKNQRPIKKYDGYTSCPLVTGYNRVILAEFDYTAQPLETFPFDQSKERITMYLMKADMMPFLYWNMMLRGYWGGPAFLRKLFHLGMN", "length": 450 }, "evidence": [ { "id": "F1SN58", "url": "https://omabrowser.org/oma/group/F1SN58/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VZF6-1", "protein_name": "Sulfide:quinone oxidoreductase, mitochondrial", "gene_name": "Sqor", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNRRLPGTISQCQKLLLATHNHAPTAFSTRFLSTSRVNRERQECQVLVVGGGTGGCAMAAKLSSRLGSDKVVVLEPEDKHYYQPMFTLIGGGMKRLDQSHRQMADVLPTKAKWVKEKALEFDPDNNTVSTSGGKTIKYDFLIIATGLQLNYGKIPGLVEALETPDSNVCSIYSPKYVDHVYECLRRTNKGNAIFTFPNCPIKCAGAPQKIAYISEHYFRKMGRRDNVNIIYNTSLPVIFGVKHYAEALMKLIKRRNITLNVQRNLVEVRHKDNIAVFEDLAKPGVHYEETYSMLHVTPPMSTPDVVANCKKLVTPTGFVDVDQLTLQHNKYSNVFAIGDSASSPNSKTAAAAAAQSPVVFKNVMAAIEGKAPTDIYDGYSSCPIVTGYSSCILAEFDYNLTPVETFPLDQSKERYSMFFMKKELMPVLYWKLMMNGYWNGPALMRKIFSVLKFNKKQ", "length": 457 }, "evidence": [ { "id": "F1SN58", "url": "https://omabrowser.org/oma/group/F1SN58/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "sulfide:quinone oxidoreductase activity", "id": "GO:0070224", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070224", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "pmid": "" }, { "name": "FAD binding", "id": "GO:0071949", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071949", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "pmid": "" }, { "name": "quinone binding", "id": "GO:0048038", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048038", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "pmid": "" }, { "name": "glutathione-dependent sulfide quinone oxidoreductase activity", "id": "GO:0106436", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106436", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "sulfide oxidation, using sulfide:quinone oxidoreductase", "id": "GO:0070221", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070221", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "pmid": "" }, { "name": "sulfur compound metabolic process", "id": "GO:0006790", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006790", "evidence": [ { "database": "UniProtKB", "id": "F1SN58", "url": "https://www.uniprot.org/uniprotkb/F1SN58" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 169, "end_pos": 171, "annotation": "n_glycosylation_sequon" }, { "start_pos": 230, "end_pos": 232, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "38359", "name": "", "equation": "ubiquinone-10 + hydrogen sulfide + sulfite + 2 H(+) = ubiquinol-10 + thiosulfate", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "38359", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/38359" } ] }, { "id": "55156", "name": "", "equation": "a quinone + hydrogen sulfide + glutathione + H(+) = S-sulfanylglutathione + a quinol", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "55156", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/55156" } ] }, { "id": "62608", "name": "", "equation": "ubiquinone-10 + hydrogen sulfide + glutathione + H(+) = S-sulfanylglutathione + ubiquinol-10", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "62608", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/62608" } ] }, { "id": "R-SSC-1614605", "name": "Persulfide sulfur is dioxygenated", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "mitochondrial inner membrane, mitochondrial matrix", "input_participant_list": [ "R-SSC-1614576" ], "output_participant_list": [ "R-SSC-1614646" ], "enzyme_list": [], "evidence": [ { "id": "R-SSC-1614605", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1614605" } ] } ], "reaction_participants": [ { "participant_id": "R-SSC-1614576", "participant_name": "SQOR [mitochondrial inner membrane]", "crossref": [ { "id": "F1SN58", "database": "UniProt", "url": "" }, { "id": "ENSSSCG00000004666", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCP00000005026", "database": "ENSEMBL", "url": "" }, { "id": "ENSSSCT00000005152", "database": "ENSEMBL", "url": "" }, { "id": "XP_020947661.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947564.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947804.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947489.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947727.1", "database": "RefSeq", "url": "" }, { "id": "XP_005659694.2", "database": "RefSeq", "url": "" }, { "id": "XP_020947945.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947618.1", "database": "RefSeq", "url": "" }, { "id": "NP_001231167.1", "database": "RefSeq", "url": "" }, { "id": "101496", "database": "VGNC", "url": "" } ] }, { "participant_id": "R-SSC-1614646", "participant_name": "SQOR [mitochondrial inner membrane]", "crossref": [ { "id": "NP_001231167.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947661.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947727.1", "database": "RefSeq", "url": "" }, { "id": "F1SN58", "database": "UniProt", "url": "" }, { "id": "XP_020947804.1", "database": "RefSeq", "url": "" }, { "id": "XP_020947945.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCP00000005026", "database": "ENSEMBL", "url": "" }, { "id": "101496", "database": "VGNC", "url": "" }, { "id": "XP_020947489.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCT00000005152", "database": "ENSEMBL", "url": "" }, { "id": "XP_020947618.1", "database": "RefSeq", "url": "" }, { "id": "ENSSSCG00000004666", "database": "ENSEMBL", "url": "" }, { "id": "XP_020947564.1", "database": "RefSeq", "url": "" }, { "id": "XP_005659694.2", "database": "RefSeq", "url": "" } ] } ], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SN58", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN58" }, { "id": "PF07992", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07992" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "FAD/NAD(P)-binding", "eco_id": "ECO_0000259", "start_pos": 44, "end_pos": 166, "start_aa": "Tyr", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 169, "end_pos": 171 }, { "start_pos": 230, "end_pos": 232 }, { "start_pos": 254, "end_pos": 256 }, { "start_pos": 366, "end_pos": 368 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SN86-1", "uniprot_ac": "F1SN86", "uniprot_id": "F1SN86_PIG", "mass": { "chemical_mass": 67049.0, "monoisotopic_mass": 67049.0 }, "refseq": {}, "gene_names": [ { "name": "RGS3", "type": "recommended", "evidence": [ { "id": "F1SN86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN86" } ] } ], "protein_names": [ { "name": "Regulator of G protein signaling 3", "type": "synonym", "evidence": [ { "id": "F1SN86", 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"database": "Ensembl Peptide", "id": "ENSSSCP00000005876.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005876.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SN86", "url": "https://www.uniprot.org/uniprotkb/F1SN86" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 297, "end_pos": 299, "annotation": "n_glycosylation_sequon" }, { "start_pos": 583, "end_pos": 585, "annotation": "n_glycosylation_sequon" }, { "start_pos": 586, "end_pos": 588, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SN86", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN86" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 25, "end_pos": 144, "start_aa": "Thr", "end_aa": "Tyr", "glycosite_overlap": "" 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"+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005474", "url": "https://www.ensembl.org/id/ENSSSCG00000005474" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005474", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005474", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19428", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19428", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000566", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000566", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002345", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002345", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002971", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002971", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012674", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012674", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022272", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022272", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "FHTKVNG", "url": "https://omabrowser.org/oma/group/FHTKVNG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR11430", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11430", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11430:SF76", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11430:SF76", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00061", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00061", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SN92", "url": "https://www.uniprot.org/uniprotkb/F1SN92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SN92-1", "url": "https://www.uniprot.org/uniprotkb/F1SN92-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKLLFLLCLGLTLASSHKEAGQDVVTSNFDASKIAGEWYSILLASDAKENIEENGSMRVFVEHIRVLDNSSLAFKFQRKVNGECTDFYAVCDKVGDGVYTVAYYGENKFRLLEVNYSDYVILHLVNVNGDKTFQLMEFYGRKPDVEPKLKDKFVEICQQYGIIKENIIDLTKIDRCFQLRGSGGVQESSAE", "length": 191, "header": "tr|F1SN92-1|F1SN92_PIG Isoform 1 of Salivary lipocalin OS=Sus scrofa OX=9823 GN=SAL1 PE=3 SV=1 CANONICAL=F1SN92-1" }, "isoforms": [ { "isoform_ac": "F1SN92-1", "url": "https://www.uniprot.org/uniprotkb/F1SN92/entry#F1SN92-1", "sequence": { "sequence": "MKLLFLLCLGLTLASSHKEAGQDVVTSNFDASKIAGEWYSILLASDAKENIEENGSMRVFVEHIRVLDNSSLAFKFQRKVNGECTDFYAVCDKVGDGVYTVAYYGENKFRLLEVNYSDYVILHLVNVNGDKTFQLMEFYGRKPDVEPKLKDKFVEICQQYGIIKENIIDLTKIDRCFQLRGSGGVQESSAE", "length": 191, "header": "tr|F1SN92-1|F1SN92_PIG Isoform 1 of Salivary lipocalin OS=Sus scrofa OX=9823 GN=SAL1 PE=3 SV=1 CANONICAL=F1SN92-1" }, "locus": { "chromosome": "1", "start_pos": 253642777, "end_pos": 253638292, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006020.3", "url": "https://www.ensembl.org/id/ENSSSCT00000006020.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005870.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005870.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SN92", "url": "https://www.uniprot.org/uniprotkb/F1SN92" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7FJ50-1", "protein_name": "Major urinary protein 20", "gene_name": "LOC100772566", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKLLLLLLLVLGLELILVCVHAEGKTGLIGKNFNPEKIKGKWYTIGLASDKREKIEEQGSMRVFVEYIRVFENSSLAFKFHTIVNGECTELYVVCDKTAEDGEYEVEYDGSNRFTILDTDYDDYIIIHLKNIKNGKKFQLMELYGRKPELSSNIKEKFEELSKKHGIVKENILDLTEADRCLQARDGEKA", "length": 190 }, "evidence": [ { "id": "F1SN92", "url": "https://omabrowser.org/oma/group/F1SN92/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BJP1-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "LOC513329", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLLLLCLGLTLVCAQEGNSDVVRSNFDIPEIAGEWYSILLASDNREKIEENGSMRVFVEYIDVLENSSLLFKFHTKVNGVCTELSLVSDSTGEDGVFTISYDGENKFRILQVNYSQHIIFYLENFSNSFKLLELYAREPDTSPELKSEFVEICQKYGVVKENVIDLTKVDRCLQERGNGVA", "length": 182 }, "evidence": [ { "id": "F1SN92", "url": "https://omabrowser.org/oma/group/F1SN92/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P11590-1", "protein_name": "Major urinary protein 4", "gene_name": "Mup4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLLLCLGLTLVCIHAEEATSKGQNLNVEKINGEWFSILLASDKREKIEEHGSMRVFVEHIHVLENSLAFKFHTVIDGECSEIFLVADKTEKAGEYSVMYDGFNTFTILKTDYDNYIMFHLINEKDGKTFQLMELYGRKADLNSDIKEKFVKLCEEHGIIKENIIDLTKTNRCLKARE", "length": 178 }, "evidence": [ { "id": "F1SN92", "url": "https://omabrowser.org/oma/group/F1SN92/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SN92", "url": "https://www.uniprot.org/uniprotkb/F1SN92" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "small molecule binding", "id": "GO:0036094", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036094", "evidence": [ { "database": "UniProtKB", "id": "F1SN92", "url": "https://www.uniprot.org/uniprotkb/F1SN92" } ], "pmid": "" }, { "name": "odorant binding", "id": "GO:0005549", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005549", "evidence": [ { "database": "UniProtKB", "id": "F1SN92", "url": "https://www.uniprot.org/uniprotkb/F1SN92" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 115, "end_pos": 117, "annotation": "n_glycosylation_sequon" }, { "start_pos": 54, "end_pos": 56, "annotation": "n_glycosylation_sequon" }, { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SN92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SN92" }, { "id": "PF00061", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00061" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Lipocalin/cytosolic fatty-acid binding", "eco_id": "ECO_0000259", "start_pos": 35, "end_pos": 172, "start_aa": "Ala", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 115, "end_pos": 117 }, { "start_pos": 54, "end_pos": 56 }, { "start_pos": 69, "end_pos": 71 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNA4-1", "uniprot_ac": "F1SNA4", "uniprot_id": "F1SNA4_PIG", "mass": { "chemical_mass": 50783.0, "monoisotopic_mass": 50783.0 }, "refseq": { "ac": "XP_001928462", "name": "thymic stromal cotransporter homolog", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928462" }, "gene_names": [ { "name": "SLC46A2", "type": "recommended", "evidence": [ { "id": "F1SNA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ] }, { "name": "SLC46A2", "type": "synonym", "evidence": [ { "id": "XP_001928462", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928462" } ] } ], "protein_names": [ { "name": "Solute carrier family 46 member 2", "type": "synonym", "evidence": [ { "id": "F1SNA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNA4/entry#names_and_taxonomy" } ] }, { "name": "thymic stromal cotransporter homolog", "type": "synonym", "evidence": [ { "id": "XP_001928462", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928462" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC46A2", "url": "https://www.uniprot.org/uniprotkb/F1SNA4", "locus": { "chromosome": "1", "start_pos": 253559546, "end_pos": 253570113, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005472", "url": "https://www.ensembl.org/id/ENSSSCG00000005472" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005472", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005472", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100157182", "url": "https://www.ncbi.nlm.nih.gov/gene/100157182", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011701", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011701", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157182", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157182", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AYWSGVM", "url": "https://omabrowser.org/oma/group/AYWSGVM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SNA4", "url": "https://www.orthodb.org/?gene=F1SNA4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23507", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23507", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23507:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23507:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07690", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07690", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001928462", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928462", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QHQ5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHQ5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHQ5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHQ5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RC02", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RC02", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RC02-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RC02-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNA4-1", "url": "https://www.uniprot.org/uniprotkb/F1SNA4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGPGAICPWRGPLPRLQVWTWIEPVVASNQVATSLYDAGLLLVVKASFGVGAFSNHSASPSPRGALEDQQQRALSNFYIIYNLVMGLTPLLSAYWLGWLSDRYHRKIAICVPLLGFLLSRLALLLKVLLDWPVEMLYGAAALNGLCGGFSAFWSGVMALGSLGSSEGRRSLRLILIDLILGLAGFCGSMVSGHLFKQMVGHTRQGLVLTACSVSCASCALFYSLLVLKVPESMAKPSKTADTVSGTVGTYRTLDPDQPASQSVVGHPPAPGKARPQKTIIALLFVGAVIYDLAVVGTVDVIPLFVLREPLSWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAAMLFALIPITTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTVYNEIYQLTMEKFVGTCFALSSFLSFLAIIPIGIVATKQASLLQYGDTAEK", "length": 472, "header": "tr|F1SNA4-1|F1SNA4_PIG Isoform 1 of Solute carrier family 46 member 2 OS=Sus scrofa OX=9823 GN=SLC46A2 PE=1 SV=1 CANONICAL=F1SNA4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QHQ5-1", "url": "https://www.uniprot.org/uniprotkb/F1SNA4/entry#A0A5G2QHQ5-1", "sequence": { "sequence": "MGPGAICPWRGPLPRLQVWTWIEPVVASNQVATSLYDAGLLLVVKASFGVGAFSNHSASPSPRGALEDQQQRALSNFYIIYNLVMGLTPLLSAYWLGWLSDRYHRKIAICVPLLGFLLSRLALLLKVLLDWPVEMLYGAAALNGLCGGFSAFWSGVMALGSLGSSEGRRSLRLILIDLILGLAGFCGSMVSGHLFKQMVGHTRQGLVLTACSVSCASCALFYSLLVLKVPESMAKPSKTADTVSGTVGTYRTLDPDQPASQSVVGHPPAPGKARPQKTIIALLFVGAVIYDLAVVGTVDVIPLFVLREPLSWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAAMLFALIPITTIRSAMSKLIKGSSYALWPRSKPRCCSMVTRQRNEGADLRESKTPSRGRAPPKTQEETRNWGPKRLLAQETRVGFRLTCSGAGLSLVGGESTFLVMEELSELSDIEIR", "length": 494, "header": "tr|A0A5G2QHQ5-1|A0A5G2QHQ5_PIG Computationally mapped isoform of Solute carrier family 46 member 2 OS=Sus scrofa OX=9823 GN=SLC46A2 PE=1 SV=2 CANONICAL=F1SNA4-1" }, "locus": { "chromosome": "1", "start_pos": 253569950, "end_pos": 253560109, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091032.2", "url": "https://www.ensembl.org/id/ENSSSCT00000091032.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064319.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064319.2" } ] } }, { "isoform_ac": "A0A5G2RC02-1", "url": "https://www.uniprot.org/uniprotkb/F1SNA4/entry#A0A5G2RC02-1", "sequence": { "sequence": "MGPGAICPWRGPLPRLQVWTWIEPVVASNQVATSLYDAGLLLVVKASFGVGAFSNHSASPSPRGALEDQQQRALSNFYIIYNLVMGLTPLLSAYWLGWLSDRYHRKIAICVPLLGFLLSRLALLLKVLLDWPVEMLYGAAALNGLCGGFSAFWSGVMALGSLGSSEGRRSLRLILIDLILGLAGFCGSMVSGHLFKQMVGHTRQGLVLTACSVSCASCALFYSLLVLKVPESMAKPSKTADTVSGTVGTYRTLDPDQPASQSVVGHPPAPGKARPQKTIIALLFVGAVIYDLAVVGTVDVIPLFVLREPLSWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAAMLFALIPITTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTVYNEIYQLTMEKFVGTCFALSSFLSFLAIIPIGYAKRLCLL", "length": 462, "header": "tr|A0A5G2RC02-1|A0A5G2RC02_PIG Computationally mapped isoform of Solute carrier family 46 member 2 OS=Sus scrofa OX=9823 GN=SLC46A2 PE=1 SV=1 CANONICAL=F1SNA4-1" }, "locus": { "chromosome": "1", "start_pos": 253569950, "end_pos": 253564803, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083196.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083196.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068144.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068144.1" } ] } }, { "isoform_ac": "F1SNA4-1", "url": "https://www.uniprot.org/uniprotkb/F1SNA4/entry#F1SNA4-1", "sequence": { "sequence": "MGPGAICPWRGPLPRLQVWTWIEPVVASNQVATSLYDAGLLLVVKASFGVGAFSNHSASPSPRGALEDQQQRALSNFYIIYNLVMGLTPLLSAYWLGWLSDRYHRKIAICVPLLGFLLSRLALLLKVLLDWPVEMLYGAAALNGLCGGFSAFWSGVMALGSLGSSEGRRSLRLILIDLILGLAGFCGSMVSGHLFKQMVGHTRQGLVLTACSVSCASCALFYSLLVLKVPESMAKPSKTADTVSGTVGTYRTLDPDQPASQSVVGHPPAPGKARPQKTIIALLFVGAVIYDLAVVGTVDVIPLFVLREPLSWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAAMLFALIPITTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTVYNEIYQLTMEKFVGTCFALSSFLSFLAIIPIGIVATKQASLLQYGDTAEK", "length": 472, "header": "tr|F1SNA4-1|F1SNA4_PIG Isoform 1 of Solute carrier family 46 member 2 OS=Sus scrofa OX=9823 GN=SLC46A2 PE=1 SV=1 CANONICAL=F1SNA4-1" }, "locus": { "chromosome": "1", "start_pos": 253569950, "end_pos": 253560332, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006018.4", "url": "https://www.ensembl.org/id/ENSSSCT00000006018.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005868.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005868.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157182", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157182", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A6S9-1", "protein_name": "Solute carrier family 46, member 2", "gene_name": "Slc46a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGPGFTCPWSGSLSGFRVRTWIEPVVASTQVAGSLYDTGLLLVLKESFASDARDSSNYSANQSLGERQEDQQQKAISNFYIIYNLVVGLTPLLSAYVLGWLSDRYHRKISICTAMLGFLLSRIGLLLKVMLDWPLEVMYGAAALNGLCGGFSAYWSGVMALGSLSCSQSRRSVRLILIDLVLGLAGFCGSMASGHLFKQIVGHSAQGLLLTACSVGCAAFALFYSLFVLKVPEAVSKPNKVHPTVDTVSGMMGTYRTLDPDQQDKPNIQANPPTPGKEKPSQAIIALLFVGAIVYDLAVVGTLDVMALFVLKDPLHWNQVQLGYGMASGYIIFITSFLGVLVFSRYFRDTTMIIIGMVSFGSGALLLAFVKKTYMFYIARAVMLFALIPITTIRSAMSKLVKDSSYGKIFVILQLCLALTGVVTSTMYNKIYQLTLNKFAGTCFLLSSFLSFLAIVPIGVVAYKQVPGSRQGECADTQRS", "length": 480 }, "evidence": [ { "id": "F1SNA4", "url": "https://omabrowser.org/oma/group/F1SNA4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CA03-1", "protein_name": "Solute carrier family 46 member 2", "gene_name": "Slc46a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGPGGTCPWSSRLSGFRVRTWIEPVVASTQVAGSLYDAGLLLVVKESFKSEAGGSSNYSANQSLVEYQEDQQQKAISNFNIIYNLVLGLTPLLSAYGLGWLSDRYHRKISICTAMLGFLLSRIGLLLKVMLDWPVEVMYGAAALNGLCGSFSAYWSGVMALGSLGCSEGRRSVRLILIDLVLGLAGFSGSMASGHLFKQIVGHSAQGLLLTACSVGCAAFALFYSLFVLKVPESKPNKVHPTVDTVSGMMGTYRTLDPDQQDKQNVPRNPRTPGKGKSSQREVVALLFVGAIIYDLAAVGTVDVMALFVLKEPLHWNQVQLGYGMASGYIIFITSFLGVLVFSRCFRDTTMIIIGMLSFGSGALLLAFVKETYMFYIARAIMLFALIPITTIRSAMSKLIKDSSYGKIFVILQLCLTLTGVVTSTIYNKIYQLTLDKFIGTCFVLSSFLSFLAIVPIGVVAYKQVPRSQQGECAEKQRS", "length": 479 }, "evidence": [ { "id": "F1SNA4", "url": "https://omabrowser.org/oma/group/F1SNA4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BY10-1", "protein_name": "Solute carrier family 46 member 2", "gene_name": "SLC46A2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSPEVTCPRRGHLPRFHPRTWVEPVVASSQVAASLYDAGLLLVVKASYGTGGSSNHSASPSPRGALEDQQQRAISNFYIIYNLVVGLSPLLSAYGLGWLSDRYHRKISICMSLLGFLLSRLGLLLKVLLDWPVEVLYGAAALNGLFGGFSAFWSGVMALGSLGSSEGRRSVRLILIDLMLGLAGFCGSMASGHLFKQMAGHSGQGLILTACSVSCASFALLYSLLVLKVPESVAKPSQELPAVDTVSGTVGTYRTLDPDQLDQQYAVGHPPSPGKAKPHKTTIALLFVGAIIYDLAVVGTVDVIPLFVLREPLGWNQVQVGYGMAAGYTIFITSFLGVLVFSRCFRDTTMIMIGMVSFGSGALLLAFVKETYMFYIARAVMLFALIPVTTIRSAMSKLIKGSSYGKVFVILQLSLALTGVVTSTLYNKIYQLTMDMFVGSCFALSSFLSFLAIIPISIVAYKQVPLSPYGDIIEK", "length": 475 }, "evidence": [ { "id": "F1SNA4", "url": "https://omabrowser.org/oma/group/F1SNA4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "R4GFI6-1", "protein_name": "Thymic stromal cotransporter homolog", "gene_name": "LOC121106434", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVGMMAMRTWVEPVVAGSQVASAFYDTALLLVVKNFYNQTNSTAPSHVMEDAQQKAVSNFYVIYNLVLGLSPLVSAYGLSKLGDKVHRKIPICVSLLGYLGSKSLLLLLILLDWPIEVMYGAAAFNGLTGGFTTFWAGIMALGSLGSSESRRSLRLIIVEMVYGLAGFLGSMASGYLFVGFSYHYREGTVLVSCSIACYAFCLLYSAFVLTVPKSAASCPDKAKSVEDSGSQLPAQTGGAESAQPSESSNRTPVTPSRLIIVMLFVAAILYDLAVVGAMNVLPLFLIREPLSWNAVEIGHGNAAGYVIFITSFLGVFVFSKYFKDITMIMIGVVSFSAGILIMAFVRWTFLFYIARAVMLFALIPLPTIRSMLSKHVEGSSYGKVFVLLQLSLVTTGVVTSTAYNKIYQSTLNWHSGFCFVLSFLAGCLSLLPLSVVAIKQRSSTGSFQLSTK", "length": 453 }, "evidence": [ { "id": "F1SNA4", "url": "https://omabrowser.org/oma/group/F1SNA4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" }, { "name": "cyclic-GMP-AMP transmembrane transporter activity", "id": "GO:0140360", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140360", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway", "id": "GO:0070430", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070430", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" }, { "name": "transmembrane transport", "id": "GO:0055085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055085", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" }, { "name": "cyclic-GMP-AMP transmembrane import across plasma membrane", "id": "GO:0140361", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140361", "evidence": [ { "database": "UniProtKB", "id": "F1SNA4", "url": "https://www.uniprot.org/uniprotkb/F1SNA4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 55, "end_pos": 57, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 55, "end_pos": 57 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNA7-1", "uniprot_ac": "F1SNA7", "uniprot_id": "F1SNA7_PIG", "mass": { "chemical_mass": 79183.0, "monoisotopic_mass": 79183.0 }, "refseq": { "ac": "XP_003122118", "name": "uncharacterized protein KIAA1958 homolog isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122118" }, "gene_names": [ { "name": "KIAA1958", "type": "recommended", "evidence": [ { "id": "F1SNA7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNA7" } ] }, { "name": "KIAA1958", "type": "synonym", "evidence": [ { "id": "XP_003122118", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122118" } ] } ], "protein_names": [ { "name": "KIAA1958", "type": "synonym", "evidence": [ { "id": "F1SNA7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNA7/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein KIAA1958 homolog isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003122118", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122118" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNA7", "url": "https://www.uniprot.org/uniprotkb/F1SNA7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KIAA1958", "url": "https://www.uniprot.org/uniprotkb/F1SNA7", "locus": { "chromosome": "1", "start_pos": 253351695, "end_pos": 253202368, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005469", "url": "https://www.ensembl.org/id/ENSSSCG00000005469" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005469", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005469", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513712", "url": "https://www.ncbi.nlm.nih.gov/gene/100513712", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR021893", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021893", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042838", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042838", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513712", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513712", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YWCVTNG", "url": "https://omabrowser.org/oma/group/YWCVTNG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR46963", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46963", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46963:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46963:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12012", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12012", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003122118", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122118", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ASK4", "url": "https://www.uniprot.org/uniprotkb/A0A287ASK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ASK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ASK4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNA7", "url": "https://www.uniprot.org/uniprotkb/F1SNA7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNA7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNA7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSCDFSYCSEPSELDEAVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSITRKRPGIVPSSLHSSSQAQMIDECSSDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQTHAGPSCIGSAKLIPHVTSAISTELDPHGMSASPSVMSRPIIQKTARVSLASPNRGPPGAHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPVAPTITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMDAKSPFYLTARKEATDLGSVWYEDQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSCCQ", "length": 716, "header": "tr|F1SNA7-1|F1SNA7_PIG Isoform 1 of KIAA1958 OS=Sus scrofa OX=9823 GN=KIAA1958 PE=4 SV=3 CANONICAL=F1SNA7-1" }, "isoforms": [ { "isoform_ac": "A0A287ASK4-1", "url": "https://www.uniprot.org/uniprotkb/F1SNA7/entry#A0A287ASK4-1", "sequence": { "sequence": "MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSCDFSYCSEPSELDEAVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSITRKRPGIVPSSLHSSSQAQMIDECSSDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQTHAGPSCIGSAKLIPHVTSAISTELDPHGMSASPSVMSRPIIQKTARVSLASPNRGPPGAHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPVAPTITTEATAQCIPDQDERAAELSREQNEKTIRSTQTALRNFREFLISKYPSETREIYVIPCKELDAYLASFFVDARQKDGSEYEPNSLANYQCGLERYLKEHRYGYSITRDKEFKRSQEALKQKQIELRCKGKGNKPHKSMKLTFADELILRKRGLLSRYNPEGLLNLVWLNNTKAFGHCTGFHGSTLKWGDIRLRVTETGLEYLEWMGQDTGDINAKTKRGGTDSRVYATQHAPQTCPVQDYKEYAQRRPPAMRYEDAPFYLSIKPVVNLAALHWYNCQALGKNKLAKMVKTMCEKGNIPGRKTNFSVYQSCSTLSEAQSNQLVLICNNLSQQAAQSVAGHSNSGNFIVSASYDSSSDTA", "length": 738, "header": "tr|A0A287ASK4-1|A0A287ASK4_PIG Computationally mapped isoform of KIAA1958 OS=Sus scrofa OX=9823 GN=KIAA1958 PE=4 SV=1 CANONICAL=F1SNA7-1" }, "locus": { "chromosome": "1", "start_pos": 253316159, "end_pos": 253275179, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038433.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038433.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047060.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047060.1" } ] } }, { "isoform_ac": "F1SNA7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNA7/entry#F1SNA7-1", "sequence": { "sequence": "MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSCDFSYCSEPSELDEAVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSITRKRPGIVPSSLHSSSQAQMIDECSSDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQTHAGPSCIGSAKLIPHVTSAISTELDPHGMSASPSVMSRPIIQKTARVSLASPNRGPPGAHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPVAPTITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMDAKSPFYLTARKEATDLGSVWYEDQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSCCQ", "length": 716, "header": "tr|F1SNA7-1|F1SNA7_PIG Isoform 1 of KIAA1958 OS=Sus scrofa OX=9823 GN=KIAA1958 PE=4 SV=3 CANONICAL=F1SNA7-1" }, "locus": { "chromosome": "1", "start_pos": 253351379, "end_pos": 253275179, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006015.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006015.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005865.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005865.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNA7", "url": "https://www.uniprot.org/uniprotkb/F1SNA7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513712", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513712", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7JGB5-1", "protein_name": "Uncharacterized protein KIAA1958 homolog isoform X4", "gene_name": "Kiaa1958", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSCDFSYCSEPSELDEAVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGIVPSSIHSGSQGQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKLQTHAGPSCVGSAKLIPHVTSAISAELDPHIMSASPSVISRPIIPKTARVSLASPNRGPPGAHGTAHQVTMQMPVSTSHPNKQISIPLSALQLPGQDEQVVSEEFLPHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPIAPTITTEATAQCIPDQDERAAELSREQNEKTIRSTQTALRNFPYSTKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMDAKSPFYLTARKEATDMGNVWYEEQRMGLRSLRGIVPNLARKVKLDNCENFTFVSFTQVSRRLSSHSCCQ", "length": 744 }, "evidence": [ { "id": "F1SNA7", "url": "https://omabrowser.org/oma/group/F1SNA7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BMJ6-1", "protein_name": "KIAA1958", "gene_name": "KIAA1958", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKTKLDCNRTRDSCDFSYCSEPSELDEAVEEYEDENTLFDMVCESSVTDEDSDFEPQPQRPQSIARKRPGIVPSSLHSSSQTQMIDECSSDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKSQTHAGPSLGSAKLISHVTSAISSELDPHGVSASPSVMSRPVVQKTTRVSLASPNRGPPSSHGTSQHVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPVAPTITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSVSDEEEMWQTGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLTDPQNHSYFARTDSVKRESRSASTRVCHGKIYHEHSRGHKQCPYCLLYKYMYVHRPPTQMEAKSPFYLTARKEAADMGRVWYEEQRMGLRSLRGVVPNLAKKVKLENCENFTFVSFTQVSRRLSSHSCCQ", "length": 715 }, "evidence": [ { "id": "F1SNA7", "url": "https://omabrowser.org/oma/group/F1SNA7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8C4P0-1", "protein_name": "Uncharacterized protein KIAA1958 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSCDFSYCSEPSELDEAVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGIVPSSIHSSSQGQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQTHAGPSCVGSAKLIPHVTSAINTELDPHILSASPSVISRPIIPKTARVSLASPNRGPPGAHGTAHQVTMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLPHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPAAPTITTEATAQCIPAYSTKLNKFPVFNINDDLNGLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLTARKEATDMGSVWYEEQRMGLRSLRGIVPNLARKVKLENCENFTFVSFTQVSRRLGSHSCCQ", "length": 716 }, "evidence": [ { "id": "F1SNA7", "url": "https://omabrowser.org/oma/group/F1SNA7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N8K9-1", "protein_name": "Uncharacterized protein KIAA1958", "gene_name": "KIAA1958", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDCLHTSSENLSKLVSWAHSHGTICSLIPNLKHLLSEGSHGNLTAMWGCSAGHAYHWPLTATCRAGSQERVCFQDNRSFNSDSPSIIGVPSETQTSPVERYPGRPVKAKLDCNRTRDSCDFSYCSEPSELDETVEEYEDENTLFDMVCESSVTDEDSDFEPQTQRPQSIARKRPGVVPSSLHSSSQTQMVDECSNDVIIKKIKQEIPEDYYIVANAELTGGVDGPALSLTQMAKPKPQTHAGPSCVGSAKLIPHVTSAISTELDPHGMSASPSVISRPIVQKTARVSLASPNRGPPGTHGTNQQVAMQMPVSTSHPNKQISIPLSALQLPGQDEQVASEEFLSHLPSQVSSCEVALSPSVNTEPEVSSSQQQPPVAPAITTEATAQCIPAYSTKLNKFPVFNINDDLNDLCTSAVSPNTTKATRYALNVWRYWCMTNGLKDHTDITKIPAVKLNELLENFYVTVKKSDGSDFLATSLHAIRRGLDRILKNAGVGFSITSSTFSSSTKKLKEKLWVLSKAGMSGARSRNIVYFSLSDEEEMWQAGCLGDDSPITLLSTVVKYNSQYLNMRTLQEHADLMYGDIELLKDPQNQPYFARTDSVKRESRSGSTRVCHGKIYHEHSRGHKQCPYCLLYKYMYIHRPPTQMEAKSPFYLTARKEATDMGSVWYEEQRMGLRSLRGIVPNLAKKVKLENCENFTFVSFTQVSRRLGSHSCCQ", "length": 716 }, "evidence": [ { "id": "F1SNA7", "url": "https://omabrowser.org/oma/group/F1SNA7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 114, "end_pos": 116, "annotation": "n_glycosylation_sequon" }, { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" }, { "start_pos": 419, "end_pos": 421, "annotation": "n_glycosylation_sequon" }, { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" }, { "start_pos": 696, "end_pos": 698, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SNA7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNA7" }, { "id": "PF12012", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12012" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ZMYM2-like/QRICH1 C-terminal", "eco_id": "ECO_0000259", "start_pos": 532, "end_pos": 685, "start_aa": "Tyr", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 114, "end_pos": 116 }, { "start_pos": 11, "end_pos": 13 }, { "start_pos": 419, "end_pos": 421 }, { "start_pos": 43, "end_pos": 45 }, { "start_pos": 696, "end_pos": 698 }, { "start_pos": 77, "end_pos": 79 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNB0-1", "uniprot_ac": "F1SNB0", "uniprot_id": "F1SNB0_PIG", "mass": { "chemical_mass": 82721.0, "monoisotopic_mass": 82721.0 }, "refseq": { "ac": "XP_005660388", "name": "sushi domain-containing protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660388" }, "gene_names": [ { "name": "SUSD1", "type": "recommended", "evidence": [ { "id": "F1SNB0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNB0" } ] }, { "name": "SUSD1", "type": "synonym", "evidence": [ { "id": "XP_005660388", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660388" } ] } ], "protein_names": [ { "name": "Sushi domain containing 1", "type": "synonym", "evidence": [ { "id": "F1SNB0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNB0/entry#names_and_taxonomy" } ] }, { "name": "sushi domain-containing protein 1", "type": "synonym", "evidence": [ { "id": "XP_005660388", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660388" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNB0", "url": "https://www.uniprot.org/uniprotkb/F1SNB0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SUSD1", "url": "https://www.uniprot.org/uniprotkb/F1SNB0", "locus": { "chromosome": "1", "start_pos": 252781491, "end_pos": 252956179, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005465", "url": "https://www.ensembl.org/id/ENSSSCG00000005465" } ] } } ], "crossref": [ { "id": "F1SNB0", "url": "https://alphafold.ebi.ac.uk/entry/F1SNB0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005465", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005465", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00033", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00033", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100516174", "url": "https://www.ncbi.nlm.nih.gov/gene/100516174", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000152", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000152", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000436", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000436", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009030", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009030", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035976", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035976", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036116", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036116", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049883", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049883", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051622", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051622", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100516174", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516174", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TCLRWQI", "url": "https://omabrowser.org/oma/group/TCLRWQI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SNB0", "url": "https://www.orthodb.org/?gene=F1SNB0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24051", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24051", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24051:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24051:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00084", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00084", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07645", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07645", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23144", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23144", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005660388", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005660388", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R4W6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4W6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R4W6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4W6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNB0", "url": "https://www.uniprot.org/uniprotkb/F1SNB0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNB0-1", "url": "https://www.uniprot.org/uniprotkb/F1SNB0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARGPRGAGFPPGRLLSLLLLLLLLCLARGAPRTPGADDSDVCASCHKHATCEQREGKKMCICKYGFVGNGRTHCIDKNECQFGATVVCGNHTSCHNTLGGFYCICLEGYRATNNNKTFIPNDGTFCTDIDECEVSGLCRHGGRCVNTHGSFECYCMDGHLPKSGPEPFHPTRDATLCTEIDCGTPPEVPDGHIIGNYTSRFGSQVRYACKEGFFSDPEDTVSSCTASGTWESPKLNCQEINCGRPPEVPHAVLVGNHSSSLGGVAHYVCQEGFESSGGKITSVCTGKGTWRASAFTCTEIIIEINDLAVFNNTCVRWQRNPRRINSELVYEIHIKGQRLDPMESVHEETVNLTTNSRTPEVCLDLHQGTNYTVSISTTPPRRSVPAVIAFQTAEDDLLEDDGIFNISMFNEACLKLHRHSRKVGSEQVYQFKVLGQRQYLNNFYHSTSFNFTTRERAAVLCLDLYPATDYTVNVTLLGSPERHSVQITTTTAPAVKQTISNISVFNETCLRWRSMKTADIEEMYLFRIRGQRWYQKAFAQEVIFNITASSQTPETCLDLSPGTNYSISIQALSSELPVVISLTTRITEPPLPEIDFVTVHGGPLPRLRLRKAEEINGPISSYQVLVLPLALQSTFVCDSEEAPSFFSNASDAKGYVTAELLAKDIPNDAMEISIGDRLYYGKYYNAPLKKGNDYCIILRITSELNKVRRSSCAVWAQVKDSSLTLQQVVGVGLGSMAAVIVLAFLSFSAV", "length": 751, "header": "tr|F1SNB0-1|F1SNB0_PIG Isoform 1 of Sushi domain containing 1 OS=Sus scrofa OX=9823 GN=SUSD1 PE=4 SV=3 CANONICAL=F1SNB0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R4W6-1", "url": "https://www.uniprot.org/uniprotkb/F1SNB0/entry#A0A5G2R4W6-1", "sequence": { "sequence": "MARGPRGAGFPPGRLLSLLLLLLLLCLARGAPRTPGADDSDVCASCHKHATCEQREGKKMCICKYGFVGNGRTHCIDKNECQFGATVVCGNHTSCHNTLGGFYCICLEGYRATNNNKTFIPNDGTFCTDIDECEVSGLCRHGGRCVNTHGSFECYCMDGHLPKSGPEPFHPTRDATLCTEIDCGTPPEVPDGHIIGNYTSRFGSQVRYACKEGFFSDPEDTVSSCTASGTWESPKLNCQEINCGRPPEVPHAVLVGNHSSSLGGVAHYVCQEGFESSGGKITSVCTGKGTWRASAFTCTEIIIEINDLAVFNNTCVRWQRNPRRINSELVYEIHIKGQRLDPMESVHEETVNLTTNSRTPEVCLDLHQGTNYTVSISTTPPRRSVPAVIAFQTAEDDLLEDDGIFNISMFNEACLKLHRHSRKVGSEQVYQFKVLGQRQYLNNFYHSTSFNFTTRERAAVLCLDLYPATDYTVNVTLLGSPERHSVQITTTTAPAVKQTISNISVFNETCLRWRSMKTADIEEMYLFRIRGQRWYQKAFAQEVIFNITASSQTPETCLDLSPGTNYSISIQALSSELPVVISLTTRITEPPLPEIDFVTVHGGPLPRLRLRKAEEINGPISSYQVLVLPLALQSTFVCDSEEAPSFFSNASDAKGYVTAELLAKDIPNDAMEISIGDRLYYGKYYNAPLKKGNDYCIILRITSELNKVRRSSCAVWAQVKA", "length": 721, "header": "tr|A0A5G2R4W6-1|A0A5G2R4W6_PIG Computationally mapped isoform of Sushi domain containing 1 OS=Sus scrofa OX=9823 GN=SUSD1 PE=4 SV=2 CANONICAL=F1SNB0-1" }, "locus": { "chromosome": "1", "start_pos": 252956104, "end_pos": 252782531, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073752.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073752.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072259.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072259.2" } ] } }, { "isoform_ac": "F1SNB0-1", "url": "https://www.uniprot.org/uniprotkb/F1SNB0/entry#F1SNB0-1", "sequence": { "sequence": "MARGPRGAGFPPGRLLSLLLLLLLLCLARGAPRTPGADDSDVCASCHKHATCEQREGKKMCICKYGFVGNGRTHCIDKNECQFGATVVCGNHTSCHNTLGGFYCICLEGYRATNNNKTFIPNDGTFCTDIDECEVSGLCRHGGRCVNTHGSFECYCMDGHLPKSGPEPFHPTRDATLCTEIDCGTPPEVPDGHIIGNYTSRFGSQVRYACKEGFFSDPEDTVSSCTASGTWESPKLNCQEINCGRPPEVPHAVLVGNHSSSLGGVAHYVCQEGFESSGGKITSVCTGKGTWRASAFTCTEIIIEINDLAVFNNTCVRWQRNPRRINSELVYEIHIKGQRLDPMESVHEETVNLTTNSRTPEVCLDLHQGTNYTVSISTTPPRRSVPAVIAFQTAEDDLLEDDGIFNISMFNEACLKLHRHSRKVGSEQVYQFKVLGQRQYLNNFYHSTSFNFTTRERAAVLCLDLYPATDYTVNVTLLGSPERHSVQITTTTAPAVKQTISNISVFNETCLRWRSMKTADIEEMYLFRIRGQRWYQKAFAQEVIFNITASSQTPETCLDLSPGTNYSISIQALSSELPVVISLTTRITEPPLPEIDFVTVHGGPLPRLRLRKAEEINGPISSYQVLVLPLALQSTFVCDSEEAPSFFSNASDAKGYVTAELLAKDIPNDAMEISIGDRLYYGKYYNAPLKKGNDYCIILRITSELNKVRRSSCAVWAQVKDSSLTLQQVVGVGLGSMAAVIVLAFLSFSAV", "length": 751, "header": "tr|F1SNB0-1|F1SNB0_PIG Isoform 1 of Sushi domain containing 1 OS=Sus scrofa OX=9823 GN=SUSD1 PE=4 SV=3 CANONICAL=F1SNB0-1" }, "locus": { "chromosome": "1", "start_pos": 252956104, "end_pos": 252825398, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006011.5", "url": "https://www.ensembl.org/id/ENSSSCT00000006011.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005862.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005862.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNB0", "url": "https://www.uniprot.org/uniprotkb/F1SNB0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516174", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516174", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JTG3-1", "protein_name": "Sushi domain containing 1", "gene_name": "Susd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQGPRGTRRSPGCGLQRLLWLLLLLSLARGASGEPGTDDVCATCHEHATCQQKEGKRICICNYGFWGNGRTRCVDKDECQFGATVICGNHTSCHNTPGGFYCVCHTGYRATNNKKMFIPNDGTFCADVDECEDSGLCRRGGRCINTPGSFECYCMEGYVAKNGSEPFHPHADATSCTEIDCGIPPEVPGAYIVGSYSSTLGGQAHYSCKEGFLSISGDRVSRCTALGAWEPPELLCQEISCGSPPEVQNAILVGNHSSSQGSVAHYDCEEGFESPGGKITSVCTDSGSWSEITYACAEIAMVIHDVWVFNDTCVRWQRSPERVNSKVTYLIHTERLQPDAVESVYEETINVTTDSKTPEVCLHLQQGANYTVSISAAPPRRSVPASLSFQTAEDGLLEDDGIFNISVFNETCLKLNRHSRQAGSEQMYQVEALGQRWYLENFYHAVSYNFTTRDQAPKLCLDLLPATDYMINITLLRPTELRSAQVTVTTSATAKQPIDLSVCNDICLRQSSLKSVGAAEMYLFHVWGQRYQKAFVQEMVLNASNSQDPEICLDPHGGTSYNVSFQALSSALPVVIYLTTLITEPPLPEVDFFTVRGRLLPSFRLRKAKEINGPISSYQVLVLPLSLQSTFSCDSEGITSFFGNASPADGYVAAEILASDVPDDTLEISIGDRLYYGEYYNAPLKTVNEYCILLRITSEWNKVRRYSCAVMAEVKDSSLTVQQMVGVGLGSVAFVTILAFLSFSAV", "length": 747 }, "evidence": [ { "id": "F1SNB0", "url": "https://omabrowser.org/oma/group/F1SNB0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0XS79-1", "protein_name": "Sushi domain containing 1", "gene_name": "SUSD1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAGRGRALGPPPLLLLLLALPPGAGLPVSDVCATCHVHATCHQIEGKSACICNYGFVGNGRTHCQDKDECQIGASKICGNHTLCHNTHGSFYCVCLDGFRASNNNKIFIPNDGTNCTDIDECEEAGLCGYNARCVNTEGSYECYCNDGYKLENGERSFHPNASSASCKEIRCGSPPEMKHGYIVGNYSLVPGSTVHYECKEGFYSNEGKSSYCTAEKAWEPATLSCKVVDCGVPPAILNAHQASLSGTAYGSEVTYSCIHGYFIASGNQTAVCNAKGQWDGADLMCKEIDCGRPLLIPHTEIIWDNSTTLLSRVFYKCKEGYYFNGERNFSECTLDQKWESITYICKEEELFSNLTVFNETCVTWQMRTGRLGVQKTYTFHILGRRWDEKTFSEDVILNITTSEDNPKVCLDLNSGSNYVVNITTISSTNMPVSVTVAVQTKVKEAFNNVLIFNDTCLKWRRSVRGADMEDRYLFHVQGQRWYQKEFLHEMTFDLTTRKQAPEVCFDLQPGTNYSINISMVALNFSLLVSMTTQITDPPFPDIEFVAAKGSAPLLRLRKAEDRNGPISLYQVIVLPLGLQSTFVCDSFATATFFSNTTDAKGYVAAEFRARDVADNMSVALGDRHYYGKFYNAPLKLGKEYCVFLRIISEWNKVRTQSCVVWAQIKNSSPSLPYMTAVVLGSIAAICLILFLSFSAARSYLYRRVHSPPAALACEGVRLSATMDTARASSLETENVSLL", "length": 740 }, "evidence": [ { "id": "F1SNB0", "url": "https://omabrowser.org/oma/group/F1SNB0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9TCM6-1", "protein_name": "Sushi domain containing 1", "gene_name": "SUSD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MARGPWGVGIPLGRLLLPLLLPLNLARGAPRAWSQDDFHSDICATCHEHATCLKRETTSICICKYGFVGNGRTHCIDKDECQYGASVVCGNHTSCHNIPGGFYCICLEGYRATNNNKTFIPNDGTFCTDIDECEVSSRCRRGGRCVNTRGSYECYCMDGYLPKGGPEPFHPTRDATSCTEIDCGTPPEIPGGYIIGNYTSRLGSQVHYACKEGFFSDSEDTASSCTAMGTWESPKLNCQEIDCGRPPEVQHAILEGNHSSRLGSVAHYVCLEGFESPGGKITSVCTEKGTWRTSASTCSEIIIEINEVSVFNNTCVRWQINPGRINSKIEYVIYIKGQRLDPLESGHEETVNLTTESRTPEVCLDLYPGTNYTVNISTAPPRRSVPAVTEFQTAGDDLLEDDGIFNISIFNEVCLKLNRHSRKVGSERVYQFKVLGRRWYLNTFYHATSFNFTTREQTAVVCLDLYPATDYSVNVTLLGSPERPSVQTTVTTAPAVKQTISNISVFNETCLRWRSMKTADIEEMYLVHIWGQRWYQKGFAQEMIFNITASSQTPETCLDLSPGTNYSVSIQALSSELPVVISLTTQITEPPLPEVDFFTVHGGPLPRLRLRKATEKNGPISSYQVLVLPSALQSTFACDSEEVASFFSEASEASGYVTAELLAKDIPDDAMEIPIGDRLYYGKYYNAPLKTGHDYCIILRITSEWNEVRRSACAVWAHVKGSSLTFLLPQMVGVGLGSMAVVIVLAFLSFSAV", "length": 753 }, "evidence": [ { "id": "F1SNB0", "url": "https://omabrowser.org/oma/group/F1SNB0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E9Q3H4-1", "protein_name": "Sushi domain containing 1", "gene_name": "Susd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRGPRGTRRSPGCGLQRLLRLVLLLSLARGVSGEPGTEDVDVCATCHEHATCQQKEGKRICICNYGFWGNGRTRCVDKDECQFGATVICGNHTSCHNTPGGFYCICHEGYRATNNNETFIPNDGTFCADIDECEDSGLCRHGGRCVNTPGSFACYCMEGYVAKNGPEPFHPRTDATSCTEIDCGIPPEVPEGYVVGSYSSTLGGQAHYSCKEGFLSVSGDRISRCTALGVWEPPKLHCQEISCGSPPEIQNAILVGNHSSRQGSVAHYDCQEGFESPGGKITSVCTEKGAWSEITYACTEIMIEIHDVLVFNDTCVRWQISPERVNARIVYLIRVERQQPDAAESVYEETVNVTTDSRTPEVCLHLQQGTNYTISISAAPPRRSVPAILGFQTPEDDLLEDDGLFNISVFNETCLTLSRHSRQVGSEQMYQVEVLGQRWYLESSYHAALFNFTTRDRAPEVCLDLYPATDYTINITLLRPTEPRSAQITITTSVTAKQTIANISVYNDTCLRWSSLKTADVLEMYLFHIWGQRWYQKAFVQEMVFNTTSSSQDPEICLDLHQGTSYNVSLQALSSALPVVIYLTTQITEPPLPEVDFFTVRGRPLPRFTLRKVKEINGPISSYQVLVLPLSLQSTFSCDSEGMTSFFGNTSPADGYVAAEILASDVPDDTLEISIGDRLYYGEYYNAPLKTGNEYCILLRITSEWNKVRRYSCAVWAEVKDSSLTAQQMVGVGLGSVAFVTILAFFSFSAV", "length": 752 }, "evidence": [ { "id": "F1SNB0", "url": "https://omabrowser.org/oma/group/F1SNB0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6UWL2-1", "protein_name": "Sushi domain-containing protein 1", "gene_name": "SUSD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGRGPWDAGPSRRLLPLLLLLGLARGAAGAPGPDGLDVCATCHEHATCQQREGKKICICNYGFVGNGRTQCVDKNECQFGATLVCGNHTSCHNTPGGFYCICLEGYRATNNNKTFIPNDGTFCTDIDECEVSGLCRHGGRCVNTHGSFECYCMDGYLPRNGPEPFHPTTDATSCTEIDCGTPPEVPDGYIIGNYTSSLGSQVRYACREGFFSVPEDTVSSCTGLGTWESPKLHCQEINCGNPPEMRHAILVGNHSSRLGGVARYVCQEGFESPGGKITSVCTEKGTWRESTLTCTEILTKINDVSLFNDTCVRWQINSRRINPKISYVISIKGQRLDPMESVREETVNLTTDSRTPEVCLALYPGTNYTVNISTAPPRRSMPAVIGFQTAEVDLLEDDGSFNISIFNETCLKLNRRSRKVGSEHMYQFTVLGQRWYLANFSHATSFNFTTREQVPVVCLDLYPTTDYTVNVTLLRSPKRHSVQITIATPPAVKQTISNISGFNETCLRWRSIKTADMEEMYLFHIWGQRWYQKEFAQEMTFNISSSSRDPEVCLDLRPGTNYNVSLRALSSELPVVISLTTQITEPPLPEVEFFTVHRGPLPRLRLRKAKEKNGPISSYQVLVLPLALQSTFSCDSEGASSFFSNASDADGYVAAELLAKDVPDDAMEIPIGDRLYYGEYYNAPLKRGSDYCIILRITSEWNKVRRHSCAVWAQVKDSSLMLLQMAGVGLGSLAVVIILTFLSFSAV", "length": 747 }, "evidence": [ { "id": "F1SNB0", "url": "https://omabrowser.org/oma/group/F1SNB0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SNB0", "url": "https://www.uniprot.org/uniprotkb/F1SNB0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1SNB0", "url": "https://www.uniprot.org/uniprotkb/F1SNB0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 197, "end_pos": 199, "annotation": "n_glycosylation_sequon" }, { "start_pos": 257, "end_pos": 259, "annotation": "n_glycosylation_sequon" }, { "start_pos": 312, "end_pos": 314, "annotation": "n_glycosylation_sequon" }, { "start_pos": 352, "end_pos": 354, "annotation": "n_glycosylation_sequon" }, { "start_pos": 371, "end_pos": 373, "annotation": "n_glycosylation_sequon" }, { "start_pos": 406, "end_pos": 408, "annotation": "n_glycosylation_sequon" }, { "start_pos": 451, "end_pos": 453, "annotation": "n_glycosylation_sequon" }, { "start_pos": 474, "end_pos": 476, "annotation": "n_glycosylation_sequon" }, { "start_pos": 502, "end_pos": 504, "annotation": "n_glycosylation_sequon" }, { "start_pos": 507, "end_pos": 509, "annotation": "n_glycosylation_sequon" }, { "start_pos": 546, "end_pos": 548, "annotation": "n_glycosylation_sequon" }, { "start_pos": 565, "end_pos": 567, "annotation": "n_glycosylation_sequon" }, { "start_pos": 649, "end_pos": 651, "annotation": "n_glycosylation_sequon" }, { "start_pos": 91, "end_pos": 93, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SNB0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 751, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SNB0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SNB0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SNB0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNB0" }, { "id": "PS50026", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50026" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EGF-like", "eco_id": "ECO_0000259", "start_pos": 39, "end_pos": 76, "start_aa": "Asp", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SNB0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNB0" }, { "id": "PS50923", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50923" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sushi", "eco_id": "ECO_0000259", "start_pos": 181, "end_pos": 240, "start_aa": "Ile", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 }, { "start_pos": 197, "end_pos": 199 }, { "start_pos": 257, "end_pos": 259 }, { "start_pos": 312, "end_pos": 314 }, { "start_pos": 352, "end_pos": 354 }, { "start_pos": 371, "end_pos": 373 }, { "start_pos": 406, "end_pos": 408 }, { "start_pos": 451, "end_pos": 453 }, { "start_pos": 474, "end_pos": 476 }, { "start_pos": 502, "end_pos": 504 }, { "start_pos": 507, "end_pos": 509 }, { "start_pos": 546, "end_pos": 548 }, { "start_pos": 565, "end_pos": 567 }, { "start_pos": 649, "end_pos": 651 }, { "start_pos": 91, "end_pos": 93 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { 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"categories": [ "Genome Annotation" ] }, { "id": "IPR007964", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007964", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052632", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052632", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:414383", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:414383", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LANQYQH", "url": "https://omabrowser.org/oma/group/LANQYQH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZUS4", "url": "https://www.orthodb.org/?gene=A0A286ZUS4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SNF6", "url": "https://www.orthodb.org/?gene=F1SNF6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21588", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21588", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21588:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21588:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05300", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05300", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231105", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231105", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZUS4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUS4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZUS4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZUS4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AC97", "url": "https://www.uniprot.org/uniprotkb/A0A287AC97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AC97-1", "url": 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"MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKETSPSGPKSQRYSGAYGASVSEEELKRRVAEELALEQAKKESENQKRLKQDKELDREKAFANEQLTRAILRERIANEEERAKAKHLAKQLEEKDRVIKKQDAFYKEQLARLEERSSEFYKVTTEQYQKAAEEVEAKFKRYECHPVCADLQAQILQCYRQNTQQTLSCSALASEYMRCVNQAKQSMLEKGG", "length": 227, "header": "tr|F1SNF6-1|F1SNF6_PIG Isoform 1 of Coiled-coil-helix-coiled-coil-helix domain containing 3 OS=Sus scrofa OX=9823 GN=CHCHD3 PE=1 SV=2 CANONICAL=F1SNF6-1" }, "isoforms": [ { "isoform_ac": "A0A286ZUS4-1", "url": "https://www.uniprot.org/uniprotkb/F1SNF6/entry#A0A286ZUS4-1", "sequence": { "sequence": "MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKETSPSGPKSQRYSGAYGASVSEEELKRRVAEELALEQAKKESENQKRLKQDKELDREKAFANEQLTRAILRERIANEEERAKAKHLDIEVKAKQLEEKDRVIKKQDAFYKEQLARLEERSSEFYKVTTEQYQKAAEEVEAKFKRYECHPVCADLQAQILQCYRQNTQQTLSCSALASEYMRCVNQAKQGISYVNLCSVKFMQF", "length": 240, "header": "tr|A0A286ZUS4-1|A0A286ZUS4_PIG Computationally mapped isoform of Coiled-coil-helix-coiled-coil-helix domain containing 3 OS=Sus scrofa OX=9823 GN=CHCHD3 PE=1 SV=1 CANONICAL=F1SNF6-1" }, "locus": { "chromosome": "18", "start_pos": 16322065, "end_pos": 16052803, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048126.1", "url": "https://www.ensembl.org/id/ENSSSCT00000048126.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035237.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035237.1" } ] } }, { "isoform_ac": "A0A287AC97-1", "url": "https://www.uniprot.org/uniprotkb/F1SNF6/entry#A0A287AC97-1", "sequence": { "sequence": "MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKETSPSGPKSQRYSGAYGASVSEEELKRRVAEELALEQAKKESENQKRLKQDKELDREKAFANEQLTRAILRERIANEEERAKAKHLAKQLEEKDRVIKKQDAFYKEQLARLEERSSEFYKVTTEQYQKAAEEVEAKFKRYECHPVCADLQAQILQCYRQNTQQTLSCSALASEYMRCVNQAKQVEFMQR", "length": 226, "header": "tr|A0A287AC97-1|A0A287AC97_PIG Computationally mapped isoform of Coiled-coil-helix-coiled-coil-helix domain containing 3 OS=Sus scrofa OX=9823 GN=CHCHD3 PE=1 SV=2 CANONICAL=F1SNF6-1" }, "locus": { "chromosome": "18", "start_pos": 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"Ensembl Transcript", "id": "ENSSSCT00000085163.1", "url": "https://www.ensembl.org/id/ENSSSCT00000085163.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072192.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072192.1" } ] } }, { "isoform_ac": "A0A8D0SDI7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNF6/entry#A0A8D0SDI7-1", "sequence": { "sequence": "MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKETSPSGPKSQRYSGAYGASVSEEELKRRVAEELALEQAKKESENQKRLKQDKELDREKAFANEQLTRAILRERIANEEERAKAKHLAKQLEEKDRVIKKQDAFYKEQLARLEERSSEFYKVTTEQYQKAAEEVEAKFKRYECHPVCADLQAQILQCYRQNTQQTLSCSALASEYMRCVNQAKQRNRKPKGTRKGALG", "length": 234, "header": "tr|A0A8D0SDI7-1|A0A8D0SDI7_PIG Computationally mapped isoform of Coiled-coil-helix-coiled-coil-helix domain containing 3 OS=Sus scrofa OX=9823 GN=CHCHD3 PE=1 SV=1 CANONICAL=F1SNF6-1" }, "locus": { "chromosome": "18", "start_pos": 16313983, "end_pos": 16052803, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055240.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055240.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000034232.2", "url": "https://www.ensembl.org/id/ENSSSCP00000034232.2" } ] } }, { "isoform_ac": "F1SNF6-1", "url": "https://www.uniprot.org/uniprotkb/F1SNF6/entry#F1SNF6-1", "sequence": { "sequence": "MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKETSPSGPKSQRYSGAYGASVSEEELKRRVAEELALEQAKKESENQKRLKQDKELDREKAFANEQLTRAILRERIANEEERAKAKHLAKQLEEKDRVIKKQDAFYKEQLARLEERSSEFYKVTTEQYQKAAEEVEAKFKRYECHPVCADLQAQILQCYRQNTQQTLSCSALASEYMRCVNQAKQSMLEKGG", "length": 227, "header": "tr|F1SNF6-1|F1SNF6_PIG Isoform 1 of Coiled-coil-helix-coiled-coil-helix domain containing 3 OS=Sus scrofa OX=9823 GN=CHCHD3 PE=1 SV=2 CANONICAL=F1SNF6-1" }, "locus": { "chromosome": "18", "start_pos": 16328685, "end_pos": 16052803, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018015.4", "url": "https://www.ensembl.org/id/ENSSSCT00000018015.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017531.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017531.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNF6", "url": "https://www.uniprot.org/uniprotkb/F1SNF6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:414383", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:414383", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AD55-1", "protein_name": "Coiled-coil-helix-coiled-coil-helix domain containing 3", "gene_name": "Chchd3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKESSPSGSKSQRYSSVYGASVSDEELKRRVAEELALEQAKMESENQRRLKHARDLEREKAVANEQLTRAILQERISSEENRTKVKHLDIEDKARQLEEKDRMIRKQDAFYKEQLSRLEERSSEFYKVTTEEYQKAAEEVESKFRRYEYHPVCADLQTKILQCYRQNTQQTLSCSALANQYMHCVNHAKQNMLEKGG", "length": 232 }, "evidence": [ { "id": "F1SNF6", "url": "https://omabrowser.org/oma/group/F1SNF6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58J6A6-1", "protein_name": "Coiled-coil-helix-coiled-coil-helix domain containing 3a isoform X1", "gene_name": "chchd3a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGANNSTRRVSFESDENDNITIVKGIRLSEKVIDRMREPSGPPSPRVPSRPPPASPPVVDPLPALVPISPPPPDPVTLHPPPSLPERVKLPEQVTTPAPPPPPPPLESVGVLSTPAGESIAPPAAASELLTASPPVDIIASPPSSTLTPSPPIADSVTAPPAFELFTPAAPLESIPTCPITKPASDLPVELTAPSPPPEPPSSAQTALQPPLTVDQPVVSPTAPPPPTVDESELRRKITEELRKGLEEDRRKTQEELNQWLEKEKSQAHAKAQAEAQAQVKDEVSRILALEKSGAEETIQKAILRERVSAEDERLQAQIYVSKRANARQLEERDKELRKQDAFYREQVAKLKERSSQFYKVTNENYHKAADEVNAKFKRYEISPVCTDLQGQILKCYRENAGKTLLCSNIASQYLQCVNHAKQEKLRTGG", "length": 430 }, "evidence": [ { "id": "F1SNF6", "url": "https://omabrowser.org/oma/group/F1SNF6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5E9D3-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKETSPSGPKSQRYSGTYGASVSDEELKRRVAEELALEQAKKESENQKRLKQSKELDAEKAFANEQLTRAILRERISNEEERAKAKHLAKQLEEKDRVIKKQDAFYKEQLARLEERSSEFYKVTTEQYQKAAEEVEAKFKRYEYHPVCADLQAQILQCYRQNTQQTLSCSALASQYMRCVNQAKQSTLEKGG", "length": 227 }, "evidence": [ { "id": "F1SNF6", "url": "https://omabrowser.org/oma/group/F1SNF6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9CRB9-1", "protein_name": "MICOS complex subunit Mic19", "gene_name": "Chchd3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGGTASTRRVTFEADENENITVVKGIRLSENVIDRMKESSPSGSKSQRYSSVYGASVSDEDLKRRVAEELALEQAKKESEHQRRLKQARDLERERAAANEQLTRAVLRERISSEEERMKAKHLARQLEEKDRVMRKQDAFYKEQLARLEERSSEFYKVTTEEYQKAAEEVEAKFKRYEYHPVCADLQTKILQCYRQNTQQTLSCSALASQYMHCVNHAKQSMLEKGG", "length": 227 }, "evidence": [ { "id": "F1SNF6", "url": "https://omabrowser.org/oma/group/F1SNF6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGGTTSTRRVTFEADENENITVVKGIRLSENVIDRMKESSPSGSKSQRYSGAYGASVSDEELKRRVAEELALEQAKKESEDQKRLKQAKELDRERAAANEQLTRAILRERICSEEERAKAKHLARQLEEKDRVLKKQDAFYKEQLARLEERSSEFYRVTTEQYQKAAEEVEAKFKRYESHPVCADLQAKILQCYRENTHQTLKCSALATQYMHCVNHAKQSMLEKGG", "length": 227 }, "evidence": [ { "id": "F1SNF6", "url": "https://omabrowser.org/oma/group/F1SNF6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "MICOS complex", "id": "GO:0061617", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061617", "evidence": [ { "database": "UniProtKB", "id": "F1SNF6", "url": "https://www.uniprot.org/uniprotkb/F1SNF6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "inner mitochondrial membrane organization", "id": "GO:0007007", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007007", "evidence": [ { "database": "UniProtKB", "id": "F1SNF6", "url": "https://www.uniprot.org/uniprotkb/F1SNF6" } ], "pmid": "" }, { "name": "mitochondrial fusion", "id": "GO:0008053", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008053", "evidence": [ { "database": "UniProtKB", "id": "F1SNF6", "url": "https://www.uniprot.org/uniprotkb/F1SNF6" } ], "pmid": "" }, { "name": "cristae formation", "id": "GO:0042407", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042407", "evidence": [ { "database": "UniProtKB", "id": "F1SNF6", "url": "https://www.uniprot.org/uniprotkb/F1SNF6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "molecular adaptor activity", "id": "GO:0060090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060090", "evidence": [ { "database": "UniProtKB", "id": "F1SNF6", "url": "https://www.uniprot.org/uniprotkb/F1SNF6" } ], "pmid": "" }, { "name": "phosphatase binding", "id": "GO:0019902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019902", "evidence": [ { "database": "UniProtKB", "id": "F1SNF6", "url": "https://www.uniprot.org/uniprotkb/F1SNF6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 19, "end_pos": 21, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 19, "end_pos": 21 } ] }, "class_list": [], "section_stats": [ { 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNG7-1", "uniprot_ac": "F1SNG7", "uniprot_id": "F1SNG7_PIG", "mass": { "chemical_mass": 93493.0, "monoisotopic_mass": 93493.0 }, "refseq": {}, "gene_names": [ { "name": "LRGUK", "type": "recommended", "evidence": [ { "id": "F1SNG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNG7" } ] } ], "protein_names": [ { "name": "Leucine-rich repeat and guanylate kinase domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1SNG7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNG7/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Involved in multiple aspects of sperm assembly including acrosome attachment, shaping of the sperm head and in the early aspects of axoneme development. Not essential for primary cilium biogenesis.", "evidence": [ { "database": "UniProtKB", "id": "F1SNG7", "url": "https://www.uniprot.org/uniprotkb/F1SNG7#function" }, { "database": "UniProtKB", "id": "ARBA00054148", "url": "https://www.uniprot.org/uniprotkb/ARBA00054148#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNG7", "url": "https://www.uniprot.org/uniprotkb/F1SNG7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LRGUK", "url": "https://www.uniprot.org/uniprotkb/F1SNG7", "locus": { "chromosome": "18", "start_pos": 14957509, "end_pos": 15071876, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016542", "url": "https://www.ensembl.org/id/ENSSSCG00000016542" } ] } } ], "crossref": [ { "id": "F1SNG7", "url": "https://alphafold.ebi.ac.uk/entry/F1SNG7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016542", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016542", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00071", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00071", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008144", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008144", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008145", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008145", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23117", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23117", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23117:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23117:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00625", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00625", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13516", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13516", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14580", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14580", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SNG7", "url": "https://www.uniprot.org/uniprotkb/F1SNG7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNG7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNG7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATPRRDPQVPRLSSLQGSLCSSRTGVQSKLLYSEKAHQACWSSFPMGQKPKNTFRKASSYLLEQLIHRYLQLDQDEKEGEGEGEAESETSSESEMLNSEGEFDGVLREEVVAEKLYQLGRSGSGTEQVYLSLNLSGLDLIDISILCGYIHLQKLNLAGNKIEDLSCVSCMPYLLELNASQNKLTAFFNFKPPKNLKKVDFSYNQISEMCDLSAYQTLTKLILDSNEIAEITGLEMCSSLTHLSLAKNKITAINGLGMLPIKILCLSNNQIEKITGLDELRVLQILDLSHNQITSLQGLESHDFLEVINLEDNKVAELSEIEYIENLPLLRVLSLLRNPIQEKSDYWSFVIFMLLRLTDLDQRKIKVEEKVAAVNKYSPPPEVVAAQDHMTHVVNSVMQPQRIFDSTLPSLDAPYPMLVLAGPQACGKRELAHRLCRQLSTYFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFDYGNHKYGLSRDTVEGIARDGLASCVHMEMEGVRSLKYSYFEPRYILVVPMDKKKYEGHLRRKGLFSRIEIEFAVSRVDLYIKINQEYPGYFDAVINADDLDVAYENLSQLVKEYLGLSEETAKSLAPPEEITTPQLKSEKSSRKFRIASKHESLDSTDRNYFVKLWAKLSCKKTPVERESMERQYETARQALMGKTPPRHTLLFQRGLVPAPTISSLRYFTALELRRSFEFCEDYFKTPFGPPEKSGVDSSGTMKHSTLFQSRPWSKDLPFWPPKEGIYSHPESTTSDAEDTALKALHKPSFPSEKGSLQHRRHTISVISRPGSNTKPTLPPIPHGCK", "length": 824, "header": "tr|F1SNG7-1|F1SNG7_PIG Isoform 1 of Leucine-rich repeat and guanylate kinase domain-containing protein OS=Sus scrofa OX=9823 GN=LRGUK PE=4 SV=5 CANONICAL=F1SNG7-1" }, "isoforms": [ { "isoform_ac": "F1SNG7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNG7/entry#F1SNG7-1", "sequence": { "sequence": "MATPRRDPQVPRLSSLQGSLCSSRTGVQSKLLYSEKAHQACWSSFPMGQKPKNTFRKASSYLLEQLIHRYLQLDQDEKEGEGEGEAESETSSESEMLNSEGEFDGVLREEVVAEKLYQLGRSGSGTEQVYLSLNLSGLDLIDISILCGYIHLQKLNLAGNKIEDLSCVSCMPYLLELNASQNKLTAFFNFKPPKNLKKVDFSYNQISEMCDLSAYQTLTKLILDSNEIAEITGLEMCSSLTHLSLAKNKITAINGLGMLPIKILCLSNNQIEKITGLDELRVLQILDLSHNQITSLQGLESHDFLEVINLEDNKVAELSEIEYIENLPLLRVLSLLRNPIQEKSDYWSFVIFMLLRLTDLDQRKIKVEEKVAAVNKYSPPPEVVAAQDHMTHVVNSVMQPQRIFDSTLPSLDAPYPMLVLAGPQACGKRELAHRLCRQLSTYFRYGACHTTRPPYFGEGDRVDYHFISQEVFDEMLNMGKFILTFDYGNHKYGLSRDTVEGIARDGLASCVHMEMEGVRSLKYSYFEPRYILVVPMDKKKYEGHLRRKGLFSRIEIEFAVSRVDLYIKINQEYPGYFDAVINADDLDVAYENLSQLVKEYLGLSEETAKSLAPPEEITTPQLKSEKSSRKFRIASKHESLDSTDRNYFVKLWAKLSCKKTPVERESMERQYETARQALMGKTPPRHTLLFQRGLVPAPTISSLRYFTALELRRSFEFCEDYFKTPFGPPEKSGVDSSGTMKHSTLFQSRPWSKDLPFWPPKEGIYSHPESTTSDAEDTALKALHKPSFPSEKGSLQHRRHTISVISRPGSNTKPTLPPIPHGCK", "length": 824, "header": "tr|F1SNG7-1|F1SNG7_PIG Isoform 1 of Leucine-rich repeat and guanylate kinase domain-containing protein OS=Sus scrofa OX=9823 GN=LRGUK PE=4 SV=5 CANONICAL=F1SNG7-1" }, "locus": { "chromosome": "18", "start_pos": 15071876, "end_pos": 14958513, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018012.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018012.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017528.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017528.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 673, "start_aa": "Thr", "end_pos": 673, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr673", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNG7", "url": "https://www.uniprot.org/uniprotkb/F1SNG7" } ], "reference": [ { "type": "PubMed", "id": 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"https://www.ensembl.org/id/ENSSSCT00000017995.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017511.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017511.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 244, "start_aa": "Thr", "end_pos": 244, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr244", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNI6", "url": "https://www.uniprot.org/uniprotkb/F1SNI6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522048", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522048", "resource": "KEGG Pathway" }, { "id": "R-SSC-433137", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-433137", "resource": "Reactome", "description": "Sodium-coupled sulphate, di- and tri-carboxylate transporters" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YBN9-1", "protein_name": "Solute carrier family 13 member 4", "gene_name": "SLC13A4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAMVKEILRSRNLLLVVLIPLLLLPLPLLYPCSEASCAYVLIVTAVYWVSEAVPLGAAALIPAFLYPLFGVMKSSEVAAEYFKNTTLLLMGVICVAASVEKWNLHKRIALRMVMMAGAKPGMLLLCFMCCTTVLSMWLSNTSTTAMVMPIVEAVLQELVNAEEEHDVISTTGNTIIEENESIGLNEKHDQPSLELIFINEDATTTDFSSLMHSKTMNSVHMIANPIGTMKSRSNGQHLPQAQILVLPPKPSELDLSTKYQYQSRHDHMICKCLSLSISYAATIGGLTTIIGTSTSLIFLEHFNNQYPNAEVVNFGTWFLFSFPISLIMLALTWLWMHWLFLGCNFKETCSVSKKKKTKREEMSERRIHEEYKKLGNVSYPEMVTGFFFILMTLLWFTREPGFVPGWSSFFEKKGYRTDATVSVFLGFLLFLIPAKKPCFGKKGKGDAERSTDANTLDPIITWKDFQKTMPWEIVVLVGGGYALAAGCKTSGLSTWIGRQMLSLSSLPYWAVTLLACILVSLVTEFVSNPATITIFLPILCSMSETLLINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAGLGVNLIGLAVVMVAINTWGIRLFQLNTFPEWAAVSNVTIQT", "length": 633 }, "evidence": [ { "id": "F1SNI6", "url": "https://omabrowser.org/oma/group/F1SNI6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F6R7G2-1", "protein_name": "Solute carrier family 13 member 4", "gene_name": "SLC13A4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLCSPIPPKTGGEEPGFWCRQGLYLPSCSAHKTKEDSWKPRKVGEVFLDGGERRQAAQHLAGAGSEGRRSRMGLLKGLLGARKLLLVILVPLLLLPLPMLHPSSEASCAYVLIVTAVYWVSEAVPLGAAALVPAFLYPFFGVLRSSEVAGEYFKNTTLLLVGVICVAAAVEKWNLHKRIALRMVLMAGAKPGMLLLCFMCCTTLLSMWLSNTSTTAMVMPIVEAVLQELVSAEEEQLVAGNSSAEEAEPINLDVNNSQPPLELIFVNEDTSNADFNSLMQNKNRNGVPTVTNSAETANLPGRKQHPSQEKPPVLTPSSRNQELKRKYKSQHDQMICKCLSLSISYAATIGGLTTIIGTSTSLIFLEHFNNQYPAAEVVNFGTWFLFSFPISLIMLVVSWFWMHWLFLGCNFKETCSLSKKKKTKREELSEKRIQEEYEKLGAITYPEMVTGFFFVLMTVLWFTREPGFVPGWDSFFEKKGYRTDATVSVFLGFLLFLIPAKKPCFGKKRDGEDRGPSLGMESIITWKDFQKTMPWEIVILVGGGYALASGSKTSGLSTWIGQQMLSLSSLPPWAVTLLACILVSIVTEFVSNPATITIFLPIVCSLSETLQINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAGLGVNVIGLVTVMVAINTWGISLFDLNTFPAWAKVSNITDQA", "length": 698 }, "evidence": [ { "id": "F1SNI6", "url": "https://omabrowser.org/oma/group/F1SNI6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9UKG4-1", "protein_name": "Solute carrier family 13 member 4", "gene_name": "SLC13A4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGLLQGLLRVRKLLLVVCVPLLLLPLPVLHPSSEASCAYVLIVTAVYWVSEAVPLGAAALVPAFLYPFFGVLRSNEVAAEYFKNTTLLLVGVICVAAAVEKWNLHKRIALRMVLMAGAKPGMLLLCFMCCTTLLSMWLSNTSTTAMVMPIVEAVLQELVSAEDEQLVAGNSNTEEAEPISLDVKNSQPSLELIFVNEESNADLTTLMHNENLNGVPSITNPIKTANQHQGKKQHPSQEKPQVLTPSPRKQKLNRKYRSHHDQMICKCLSLSISYSATIGGLTTIIGTSTSLIFLEHFNNQYPAAEVVNFGTWFLFSFPISLIMLVVSWFWMHWLFLGCNFKETCSLSKKKKTKREQLSEKRIQEEYEKLGDISYPEMVTGFFFILMTVLWFTREPGFVPGWDSFFEKKGYRTDATVSVFLGFLLFLIPAKKPCFGKKNDGENQEHSLGTEPIITWKDFQKTMPWEIVILVGGGYALASGSKSSGLSTWIGNQMLSLSSLPPWAVTLLACILVSIVTEFVSNPATITIFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAGLGVNVIGLVIVMVAINTWGVSLFHLDTYPAWARVSNITDQA", "length": 626 }, "evidence": [ { "id": "F1SNI6", "url": "https://omabrowser.org/oma/group/F1SNI6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "solute:sodium symporter activity", "id": "GO:0015370", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015370", "evidence": [ { "database": "UniProtKB", "id": "F1SNI6", "url": "https://www.uniprot.org/uniprotkb/F1SNI6" } ], "pmid": "" }, { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "F1SNI6", "url": "https://www.uniprot.org/uniprotkb/F1SNI6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SNI6", "url": "https://www.uniprot.org/uniprotkb/F1SNI6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "transmembrane transport", "id": "GO:0055085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055085", "evidence": [ { "database": "UniProtKB", "id": "F1SNI6", "url": "https://www.uniprot.org/uniprotkb/F1SNI6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 140, "end_pos": 142, "annotation": "n_glycosylation_sequon" }, { "start_pos": 170, "end_pos": 172, "annotation": "n_glycosylation_sequon" }, { "start_pos": 184, "end_pos": 186, "annotation": "n_glycosylation_sequon" }, { "start_pos": 621, "end_pos": 623, "annotation": "n_glycosylation_sequon" }, { "start_pos": 84, "end_pos": 86, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 244 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 140, "end_pos": 142 }, { "start_pos": 170, "end_pos": 172 }, { "start_pos": 184, "end_pos": 186 }, { "start_pos": 621, "end_pos": 623 }, { "start_pos": 84, "end_pos": 86 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNJ7-1", "uniprot_ac": "F1SNJ7", "uniprot_id": "F1SNJ7_PIG", "mass": { "chemical_mass": 54741.0, "monoisotopic_mass": 54741.0 }, "refseq": {}, "gene_names": [ { "name": "SVOPL", "type": "recommended", "evidence": [ { "id": "F1SNJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7" } ] } ], "protein_names": [ { "name": "SVOP like", "type": "synonym", "evidence": [ { "id": "F1SNJ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNJ7", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SVOPL", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7", "locus": { "chromosome": "18", "start_pos": 11043021, "end_pos": 10968790, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016517", "url": "https://www.ensembl.org/id/ENSSSCG00000016517" } ] } } ], "crossref": [ { "id": "F1SNJ7", "url": "https://alphafold.ebi.ac.uk/entry/F1SNJ7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016517", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016517", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd17442", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17442", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR005828", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005828", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23511", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23511", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23511:SF45", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23511:SF45", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00083", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00083", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SNJ7", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNJ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASKRLEPVTVISLRELSQGGPAPQPKETKTFTVEDAVETIGFGRFHIALFLIMGSTGVAEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSIFFGLLADRYGRWKILFISFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGVSGHAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVVIPTIGWRWLIRIASIPGIVLIMAFKFIPESARFNVSTGNTQAALATLERIAKMNRSVMPEGKLVEPILEKRGRFADLLDAKYLRTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSRSESEVVVTEGVSEESQSPCHCHMFAPSDYQTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASFLGALCLFSSVCIVCAISAFTLPIETKGRALQLIIQFKP", "length": 496, "header": "tr|F1SNJ7-1|F1SNJ7_PIG Isoform 1 of SVOP like OS=Sus scrofa OX=9823 GN=SVOPL PE=3 SV=4 CANONICAL=F1SNJ7-1" }, "isoforms": [ { "isoform_ac": "F1SNJ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7/entry#F1SNJ7-1", "sequence": { "sequence": "MASKRLEPVTVISLRELSQGGPAPQPKETKTFTVEDAVETIGFGRFHIALFLIMGSTGVAEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSIFFGLLADRYGRWKILFISFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGVSGHAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVVIPTIGWRWLIRIASIPGIVLIMAFKFIPESARFNVSTGNTQAALATLERIAKMNRSVMPEGKLVEPILEKRGRFADLLDAKYLRTTLQIWVIWLGISFAYYGVILASAELLERDLVCGSRSESEVVVTEGVSEESQSPCHCHMFAPSDYQTMIISTIGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTTMRALGMGTSGSLCRIGAMVAPFISQVLMSASFLGALCLFSSVCIVCAISAFTLPIETKGRALQLIIQFKP", "length": 496, "header": "tr|F1SNJ7-1|F1SNJ7_PIG Isoform 1 of SVOP like OS=Sus scrofa OX=9823 GN=SVOPL PE=3 SV=4 CANONICAL=F1SNJ7-1" }, "locus": { "chromosome": "18", "start_pos": 11043018, "end_pos": 10977656, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017985.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017985.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017501.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017501.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNJ7", "url": "https://www.uniprot.org/uniprotkb/F1SNJ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], 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"sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNL3-1", "uniprot_ac": "F1SNL3", "uniprot_id": "F1SNL3_PIG", "mass": { "chemical_mass": 77679.0, "monoisotopic_mass": 77679.0 }, "refseq": { "ac": "XP_013848719", "name": "uncharacterized protein C18orf63 homolog", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013848719" }, "gene_names": [ { "name": "C1H18orf63", "type": "recommended", "evidence": [ { "id": "F1SNL3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNL3" } ] }, { "name": "C18orf63", "type": "synonym", 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"Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C1H18orf63", "url": "https://www.uniprot.org/uniprotkb/F1SNL3", "locus": {} } ], "crossref": [ { "id": "F1SNL3", "url": "https://alphafold.ebi.ac.uk/entry/F1SNL3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000004874", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004874", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622499", "url": "https://www.ncbi.nlm.nih.gov/gene/100622499", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR031643", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031643", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622499", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622499", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SQHNIAP", "url": "https://omabrowser.org/oma/group/SQHNIAP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SNL3", "url": "https://www.orthodb.org/?gene=F1SNL3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28495", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28495", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28495:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28495:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15813", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15813", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013848719", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013848719", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SNL3", "url": "https://www.uniprot.org/uniprotkb/F1SNL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNL3-1", "url": "https://www.uniprot.org/uniprotkb/F1SNL3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNDSRQQALFFTTLPDLQKLCAVRIVLIKGVADTEIRSTQVKICRQLLFLHQDILTSPVPGIFTQIWVVMAIPFYQAGKLNACIEKYGAKVETPQRVIPVILQNCLSYSLMARLSPAWNKTGHLLVQGREFLSQMGKQRAVVLGINVTETQVCLSIEAYTIRLPPPQLTEFDISQNIIKDFETNRNAVIEGHLILNNWCYVLPSMKMGQIVNILHTIPPDCPFHSYEDFRKHWDDLYGYKLPVDCGTTKIYCSIYFKMIGERIFTYPLSCIRSQPIQFFPRVDVEGVLKSFLSDLKSKLPHICGFPIKMTTKPCYHTQELTKLHLQENKVRPPNLTTKQKFRSSLAQAPSIRSPPAQSLLQCSVAMHHKVELSVSQPKPCVSSALHLQRESVQNRKKSLSDKAAQVHLEVPKLNRGNTPMQDINVGSQHNIAPKFIPVFKNQPIQMNKNILKPENLKRKQHIVIEPKLFSLKTSVIQDDKLNLDPVIKKRCNRSIQMTARNVNPKTSRSLQEKNTESYENTESYASSVKSLPVSLNESKQLSNSSVFQVSNNNLGVIKSAVDFQATGKENLTSKYKTQILRKGHNSLKVKRQPYIFESDTETEDPQLLHQQAVDQTKEDDVSNHQLIVSRIPHRSKRELCQESSKTPKRPHSSTIRHGQSSSRNQIRNLDKSKPKKSLVISKA", "length": 683, "header": "tr|F1SNL3-1|F1SNL3_PIG Isoform 1 of Chromosome 1 C18orf63 homolog OS=Sus scrofa OX=9823 GN=C1H18orf63 PE=4 SV=3 CANONICAL=F1SNL3-1" }, "isoforms": [ { 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"start_pos": 149721455, "end_pos": 149687667, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005380.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005380.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005245.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005245.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNL3", "url": "https://www.uniprot.org/uniprotkb/F1SNL3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622499", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622499", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A494BAC1-1", "protein_name": "Predicted gene, 17266", "gene_name": "Gm17266", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": 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"C18h18orf63", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNEPKVQSLFFIILPDLHKLCTVQITLSGRVAEIDIRSTQIKMCRQLLLSHEDILTAPVPGILNQISVVMSIPFFKSGRLNAYIEKYEAKMEAPQRVTPAILQNCLSYSLMARLAPAWNRTGHLLVQGRDFLSNMGKQSAVVLDINVTETQVCLSIEVYTIRLPPPELQEFDISQHIIEDFHTNQNAVIERHSILSNWCYILPSMKMGQIINFLHTAPPDCPFHSFEDFQRHWDDLYGYKLPEDCGDMKIYCSIYFKMIDKRTFTYPLSCIRSQPMQFFPRVDLDGVLKSFISDLRLKLPHLCGFPVKMTYKPCYYTQELTRPHLQENKVKPSNLTTKKFFRESLTQATLVKPTRALNFIPQSTAAKHKVEPSVGQQRSGLFSAGCHQPGSFQDRKPYWPLKAPQLHLVESKLTRENTQAENKNLCSQGNRAPPFIPVFKRKSEQVNKNVSALSTLKRKQSGFTEPTTLAQETGATQGGKPSLGAATRKRPNSNIRVLAGNLSQKGSKPLQEKGTEFYDRKKEQPLSDLRQTVHLREARPSCTRAVTQTSRNSVAGVKNNVDIHPGGKDNLTSRFITQILGKSHESLKLKSQPHIFESDLETEDSQLQQQQLANQVQEADAAEHSPIESRAARSRRQTVCLESSRASTKRCSSAAHQRQYSSKTQVSNTAKPKNFLNIAASEYSEGHRLSTRCPALP", "length": 697 }, "evidence": [ { "id": "F1SNL3", "url": "https://omabrowser.org/oma/group/F1SNL3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68DL7-1", 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"categories": [ "Protein Classification" ] }, { "id": "IPR001810", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001810", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46731", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46731", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46731:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46731:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12937", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12937", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8951664", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": 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}, { "id": "LEGPLMC", "url": "https://omabrowser.org/oma/group/LEGPLMC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SNM8", "url": "https://www.orthodb.org/?gene=F1SNM8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14198", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14198", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14198:SF17", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14198:SF17", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05805", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05805", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003133742", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003133742", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SNM8", "url": "https://www.uniprot.org/uniprotkb/F1SNM8", "database": "UniProtKB", 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Isoform 1 of Transmembrane 4 L six family member 20 OS=Sus scrofa OX=9823 GN=TM4SF20 PE=3 SV=2 CANONICAL=F1SNM8-1" }, "locus": { "chromosome": "15", "start_pos": 128814125, "end_pos": 128803816, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017691.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017691.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017210.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017210.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNM8", "url": "https://www.uniprot.org/uniprotkb/F1SNM8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513630", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513630", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZJ15-1", "protein_name": "Transmembrane 4 L six family member 20", "gene_name": "Tm4sf20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"uniprot_canonical_ac": "Q53R12-1", "protein_name": "Transmembrane 4 L6 family member 20", "gene_name": "TM4SF20", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTCCEGWTSCNGFSLLVLLLLGVVLNAIPLIVSLVEEDQFSQNPISCFEWWFPGIIGAGLMAIPATTMSLTARKRACCNNRTGMFLSSLFSVITVIGALYCMLISIQALLKGPLMCNSPSNSNANCEFSLKNISDIHPESFNLQWFFNDSCAPPTGFNKPTSNDTMASGWRASSFHFDSEENKHRLIHFSVFLGLLLVGILEVLFGLSQIVIGFLGCLCGVSKRRSQIV", "length": 229 }, "evidence": [ { "id": "F1SNM8", "url": "https://omabrowser.org/oma/group/F1SNM8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CQY8-1", "protein_name": "Transmembrane 4 L6 family member 20", "gene_name": "Tm4sf20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTCCEGWTSCNGFSLLILILLGVVINCIPLGISLVEADSTSQNPISCYEWWFPGIIGAGLMAIPATTMSLAARKRACCNNKTGMFLSSLFSVITVVGAVYCMLVSLQALLEGPLICNTQANSTVTCEFSLKNLSKFDPESFNLLWFFNGTCVSPTDFKNPTINNMVSNWKIPNSNSEEDRHRIFHFSVFMSLLLVGILELLFGLSQILIGFLGCLCGVSQRRSQIV", "length": 226 }, "evidence": [ { "id": "F1SNM8", "url": "https://omabrowser.org/oma/group/F1SNM8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SNM8", "url": "https://www.uniprot.org/uniprotkb/F1SNM8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SNM8", "url": "https://www.uniprot.org/uniprotkb/F1SNM8" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNP6-1", "uniprot_ac": "F1SNP6", "uniprot_id": "F1SNP6_PIG", "mass": { "chemical_mass": 78275.0, "monoisotopic_mass": 78275.0 }, "refseq": { "ac": "XP_013840008", "name": "neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840008" }, "gene_names": [ { "name": "NYAP2", "type": "recommended", "evidence": [ { "id": "F1SNP6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNP6" } ] }, { "name": "NYAP2", "type": "synonym", "evidence": [ { "id": "XP_013840008", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840008" } ] } ], "protein_names": [ { "name": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2", "type": "synonym", "evidence": [ { "id": "F1SNP6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNP6/entry#names_and_taxonomy" } ] }, { "name": "neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_013840008", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840008" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNP6", "url": "https://www.uniprot.org/uniprotkb/F1SNP6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NYAP2", "url": "https://www.uniprot.org/uniprotkb/F1SNP6", "locus": { "chromosome": "15", "start_pos": 127293495, "end_pos": 127033422, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016239", "url": "https://www.ensembl.org/id/ENSSSCG00000016239" } ] } } ], "crossref": [ { "id": "F1SNP6", "url": "https://alphafold.ebi.ac.uk/entry/F1SNP6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016239", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016239", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100620202", "url": "https://www.ncbi.nlm.nih.gov/gene/100620202", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026722", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026722", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029353", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029353", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039482", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039482", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "SQMPWLC", "url": "https://omabrowser.org/oma/group/SQMPWLC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22633", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22633", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22633:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22633:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15439", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15439", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15452", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15452", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013840008", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013840008", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AR89", "url": "https://www.uniprot.org/uniprotkb/A0A287AR89", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AR89-1", "url": 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"MKAARMMSSNPEESPLDSFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVNSTPASKGGKGPERTEVSAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQVGSPAGDPEEEEPVYIEMVGNILRDFRKDDDDQSEAVYEEMKYPIFDDLGQDSKCDLDHHSCSSQCATPTVPDLDFAKSSVPCTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYMKQQAGASPSSLPSHASGHSKLEKDQAGALGPVPAASVLSSSPPPPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSSSVPHSTTRPVSQDGSKMVNAAVNTYGSAPSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPIPKLDSKERGHHGASSSREPIKAQEWDGTPGPPVVTSRMGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQASDLQQSQVACMQWFHGDHTMLEMIEKKRCLCKEIKARQKTEKGLCKQDSMPILPSWKKNAGAKKYSPPPYSKQQTVFWDTAI", "length": 719, "header": "tr|F1SNP6-1|F1SNP6_PIG Isoform 1 of Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 OS=Sus scrofa OX=9823 GN=NYAP2 PE=4 SV=3 CANONICAL=F1SNP6-1" }, "isoforms": [ { "isoform_ac": "A0A287AR89-1", "url": "https://www.uniprot.org/uniprotkb/F1SNP6/entry#A0A287AR89-1", "sequence": { "sequence": "MKAARMMSSNPEESPLDSFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVNSTPASKGGKGPERTEVSAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQVGSPAGDPEEEEPVYIEMVGNILRDFRKDDDDQSEAVYEEMKYPIFDDLGQDSKCDLDHHSCSSQCATPTVPDLDFAKSSVPCTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYMKQQAGASPSSLPSHASGHSKLEKDQAGALGPVPAASVLSSSPPPPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSSSVPHSTTRPVSQDGSKMVNAAVNTYGSAPSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPIPKLDSKERGHHGASSSREPIKAQEWDGTPGPPVVTSRMGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQASDLQQSQTVSVSQTFLTSYDLDDLEDYWTSIL", "length": 669, "header": "tr|A0A287AR89-1|A0A287AR89_PIG Computationally mapped isoform of Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 OS=Sus scrofa OX=9823 GN=NYAP2 PE=4 SV=2 CANONICAL=F1SNP6-1" }, "locus": { "chromosome": "15", "start_pos": 127285155, "end_pos": 127042783, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053840.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053840.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046370.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046370.2" } ] } }, { "isoform_ac": "F1SNP6-1", "url": "https://www.uniprot.org/uniprotkb/F1SNP6/entry#F1SNP6-1", "sequence": { "sequence": "MKAARMMSSNPEESPLDSFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVNSTPASKGGKGPERTEVSAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQVGSPAGDPEEEEPVYIEMVGNILRDFRKDDDDQSEAVYEEMKYPIFDDLGQDSKCDLDHHSCSSQCATPTVPDLDFAKSSVPCTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYMKQQAGASPSSLPSHASGHSKLEKDQAGALGPVPAASVLSSSPPPPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSSSVPHSTTRPVSQDGSKMVNAAVNTYGSAPSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPIPKLDSKERGHHGASSSREPIKAQEWDGTPGPPVVTSRMGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQASDLQQSQVACMQWFHGDHTMLEMIEKKRCLCKEIKARQKTEKGLCKQDSMPILPSWKKNAGAKKYSPPPYSKQQTVFWDTAI", "length": 719, "header": "tr|F1SNP6-1|F1SNP6_PIG Isoform 1 of Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 OS=Sus scrofa OX=9823 GN=NYAP2 PE=4 SV=3 CANONICAL=F1SNP6-1" }, "locus": { "chromosome": "15", "start_pos": 127289793, "end_pos": 127042783, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017682.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017682.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017202.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017202.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNP6", "url": "https://www.uniprot.org/uniprotkb/F1SNP6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZK71-1", "protein_name": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2", "gene_name": "Nyap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIPSKMMSANPEEDPLDTFFQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEETIKRIGGEVGRGQDASYAGKHFRMGFMTMPAPQDRLPHPCSSGFTVRSQSLHSVGGTEDDSSCGSRRQPPPKPKRDPSTKLSTSSETVNSTAATKSGRPLERAEGKFTAPTSHSPPRASTSGHLLSSPGSQERNIKVSAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHVPRRTSLPRDSSLSQVCSPAADPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGHDAKCDFDHHSCSSQCATPTVPDLDFVKSSGPCTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPPGACPPSLPSHSSSHAKDQGGALGPAPGASILSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSSSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYSTAQSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDSKERGHHGASSSREPVKAQEWDGTPGPPVVTSRMGRCSVSPTLLAGNHGSEPKVSCKLGRSASTSGVPPPSVTPLRQASDLQQSQVACMPWFHGDHTMLEMIEKKRCLCKEIKARQKTEKGLCKQDSMPILPSWKKNAGAKKYSPPPYSKQQTVFWDTAI", "length": 749 }, "evidence": [ { "id": "F1SNP6", "url": "https://omabrowser.org/oma/group/F1SNP6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MJF0-1", "protein_name": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2", "gene_name": "NYAP2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKSSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEEAIKRIGGEVGRGHEGTYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVNSTAASKSGKGPERTEVSTKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLCQVSSPAGDPEEEEPVYIEMVGNILRDFRKDDEDQSEAVYEEMKYPIFDDLGQDSKCDLDHHSCSSQCATPTVPDLDLAKSSVPCTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYMKQQAGASPSSLPSHASSHAKLEKDQAGALGPVPTASVLSSSPPPPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSDGSKMVNAAVNTYGSAPSGSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPIPKLDSKERGHHGASSSREPIKAQEWDGTPGPPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQASDLHQSQVACMQWFHGDHTMLEMIEKKRCLCKEIKARQKTEKGLCKQDSMPILPSWKKNAGAKKYSPPPYSKQQTVFWDTAI", "length": 718 }, "evidence": [ { "id": "F1SNP6", "url": "https://omabrowser.org/oma/group/F1SNP6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1NIB8-1", "protein_name": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2", "gene_name": "NYAP2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MMSSNKEEVTLGAFLQYIEDMGMKAYDGLVIQNASDIARENDRMRNETNLAYLKEKSEKRRKQEEAIKRIGGEVVRGNEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFAVRSQSLHSVGGTDDETSSSRKQPPPKPKRDPNTKLSTSSETVNTGTTSKSGKLPDRTEVSAKPRPHSDEYTKKIPPPKPKRNPNTQLSTSFDETYIKKHGPMKTPLTRDASLSQVSSPAPDTEEEEPVYIEMVGNILRDFKKDEDDQSEAVYEEMKYPIFDDVGQDSKCQCEYDHHTCSSQCATPTVPDLDFTKTSVPSTPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVSYIKQQAGASPSSLPPHTPGHQKLEKEQMVSHGTSTPGHTSSPPHPSTLYRTQSPHGYPKSHSASPSPVSMGRSLTPLSLKRPPPYDSVHSGSLSRSSPSVPHSTARNTLQEGGKMVNVSVSTYGSSSQSSSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRRSKEPAEKPLDELKIRSHSTEPLPKLENKERGGHHGTASSREPGKAQEWDGTPGPPMVSSRLGRSSVSPTMLAGSNSSEPKASCRLGRSASTSGVPPPSVTPLRQASDLQPSQVTCMQWLQGDHTMLDMIEKKRCLCKEIKARQKSEKGLCKQDSMPILPSWKKNTGTKKYSPPPYSKQQTVFWDTAI", "length": 715 }, "evidence": [ { "id": "F1SNP6", "url": "https://omabrowser.org/oma/group/F1SNP6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9P242-1", "protein_name": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2", "gene_name": "NYAP2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MISSKMMSSNPEEDPLDTFLQYIEDMGMKAYDGLVIQNASDIARENDRLRNETNLAYLKEKNEKRRRQEEAIKRIGGEVGRGHEGSYVGKHFRMGFMTMPAPQDRLPHPCSSGFSVRSQSLHSVGGTDDDSSCGSRRQPPPKPKRDPSTKLSTSSETVSSTAASKSGKTPERTEASAKPRPHSDEYSKKIPPPKPKRNPNTQLSTSFDETYIKKHGPRRTSLPRDSSLSQMGSPAGDPEEEEPVYIEMVGNILRDFRKEDDDQSEAVYEEMKYPIFDDLGQDAKCDFDHHSCSSQCATPTVPDLDFAKASVPCPPKGLLCDIPPPFPNLLSHRPPLLVFPPAPVHCSPNSDESPLTPLEVTKLPVLENVSYMKQPAGASPSTLPSHVPGHAKLEKEQAAALGPASATPALSSSPPPPSTLYRTQSPHGYPKSHSTSPSPVSMGRSLTPLSLKRPPPYDAVHSGSLSRSSPSVPHSTPRPVSQDGAKMVNAAVNTYGAAPGGSRSRTPTSPLEELTSLFSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTEPLPKLDNKERGHHGASSSREPVKAQEWDGTPGTPVVTSRLGRCSVSPTLLAGNHSSEPKVSCKLGRSASTSGVPPPSVTPLRQSSDLQQSQVPSSLANRD", "length": 653 }, "evidence": [ { "id": "F1SNP6", "url": "https://omabrowser.org/oma/group/F1SNP6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "neuron projection morphogenesis", "id": "GO:0048812", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048812", "evidence": [ { "database": "UniProtKB", "id": "F1SNP6", "url": "https://www.uniprot.org/uniprotkb/F1SNP6" } ], "pmid": "" }, { "name": "phosphatidylinositol 3-kinase/protein kinase B signal transduction", "id": "GO:0043491", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043491", "evidence": [ { "database": "UniProtKB", "id": "F1SNP6", "url": "https://www.uniprot.org/uniprotkb/F1SNP6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 368, "end_pos": 370, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" }, { "start_pos": 51, "end_pos": 53, "annotation": "n_glycosylation_sequon" }, { "start_pos": 606, "end_pos": 608, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SNP6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 719, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SNP6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SNP6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SNP6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNP6" }, { "id": "PF15452", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15452" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter C-terminal", "eco_id": "ECO_0000259", "start_pos": 467, "end_pos": 719, "start_aa": "Arg", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SNP6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNP6" }, { "id": "PF15439", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15439" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter N-terminal", "eco_id": "ECO_0000259", "start_pos": 56, "end_pos": 431, "start_aa": "Ala", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 159, "end_pos": 161 }, { "start_pos": 368, "end_pos": 370 }, { "start_pos": 38, "end_pos": 40 }, { "start_pos": 51, "end_pos": 53 }, { "start_pos": 606, "end_pos": 608 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNQ6-1", "uniprot_ac": "F1SNQ6", "uniprot_id": "F1SNQ6_PIG", "mass": { "chemical_mass": 56566.0, "monoisotopic_mass": 56566.0 }, "refseq": {}, "gene_names": [ { "name": "ENTREP2", "type": "recommended", "evidence": [ { "id": "F1SNQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6" } ] } ], "protein_names": [ { "name": "Endosomal transmembrane epsin interactor 2", "type": "synonym", "evidence": [ { "id": "F1SNQ6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNQ6", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ENTREP2", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6", "locus": { "chromosome": "1", "start_pos": 144316121, "end_pos": 144788290, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004850", "url": "https://www.ensembl.org/id/ENSSSCG00000004850" } ] } } ], "crossref": [ { "id": "F1SNQ6", "url": "https://alphafold.ebi.ac.uk/entry/F1SNQ6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000004850", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004850", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR007237", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007237", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030431", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030431", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR17615", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17615", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR17615:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR17615:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04103", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04103", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27697", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27697", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SNQ6", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNQ6-1", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPPASGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSARVRHSCPFWAGFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQLVNSLEGCQLIKFDSVEVCVCCEMKHQLSGCSNLGETLKLNPLQEDCNAVRLTLKDLLFSVCALNVLSTIVCALATAMCCMQMVSADVLQMFLPQRVPATSPACLTPHGTVLHQTLDFDEFVPPLPPPPYYPPEYTCTPTADAHRGLHLDFASSPFGTLYGVAINSPGLLYPAELPPPYEAVVGPTPASQLPSADQQVIEPSSRNPDATTGFSTQVPADNTSLLASEGSAAPGLNRPSPDGPTGAFPAPCPGQTSPEGPDQGTGARPGPKRVARSASDPTSCTFRAAGGASSHTPSCSQDLEAGLSRAALGTASLSHSVTAAWAYRHQLSPPGEPDSWKTDHRFKPEPLQTVSKEQLHSLVDSKAYADTRVLVAKFLEHSSCSLPAEVRHVVGSACAAVPSEECPVEEAVLSACVLDQL", "length": 538, "header": "tr|F1SNQ6-1|F1SNQ6_PIG Isoform 1 of Endosomal transmembrane epsin interactor 2 OS=Sus scrofa OX=9823 GN=ENTREP2 PE=3 SV=4 CANONICAL=F1SNQ6-1" }, "isoforms": [ { "isoform_ac": "F1SNQ6-1", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6/entry#F1SNQ6-1", "sequence": { "sequence": "MPPASGPRAPRPAALPRSLSRLRECPGRSRIVLALGATQMALGCLIVAVSFAALALTTSARVRHSCPFWAGFSVLLSGLIGVVSWKRPLSLVITFFMLLSAVCVMLNLAGSILSCQNAQLVNSLEGCQLIKFDSVEVCVCCEMKHQLSGCSNLGETLKLNPLQEDCNAVRLTLKDLLFSVCALNVLSTIVCALATAMCCMQMVSADVLQMFLPQRVPATSPACLTPHGTVLHQTLDFDEFVPPLPPPPYYPPEYTCTPTADAHRGLHLDFASSPFGTLYGVAINSPGLLYPAELPPPYEAVVGPTPASQLPSADQQVIEPSSRNPDATTGFSTQVPADNTSLLASEGSAAPGLNRPSPDGPTGAFPAPCPGQTSPEGPDQGTGARPGPKRVARSASDPTSCTFRAAGGASSHTPSCSQDLEAGLSRAALGTASLSHSVTAAWAYRHQLSPPGEPDSWKTDHRFKPEPLQTVSKEQLHSLVDSKAYADTRVLVAKFLEHSSCSLPAEVRHVVGSACAAVPSEECPVEEAVLSACVLDQL", "length": 538, "header": "tr|F1SNQ6-1|F1SNQ6_PIG Isoform 1 of Endosomal transmembrane epsin interactor 2 OS=Sus scrofa OX=9823 GN=ENTREP2 PE=3 SV=4 CANONICAL=F1SNQ6-1" }, "locus": { "chromosome": "1", "start_pos": 144788091, "end_pos": 144319455, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005354.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005354.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005222.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005222.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 305, "start_aa": "Thr", "end_pos": 305, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr305", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 362, "start_aa": "Thr", "end_pos": 362, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr362", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNQ6", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SNQ6", "url": "https://www.uniprot.org/uniprotkb/F1SNQ6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 339, "end_pos": 341, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SNQ6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 538, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SNQ6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SNQ6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 305, 362 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 339, "end_pos": 341 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNR2-1", "uniprot_ac": "F1SNR2", "uniprot_id": "F1SNR2_PIG", "mass": { "chemical_mass": 87649.0, "monoisotopic_mass": 87649.0 }, "refseq": { "ac": "XP_003121713", "name": "myotubularin-related protein 10", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121713" }, "gene_names": [ { "name": "MTMR10", "type": "recommended", "evidence": [ { "id": "F1SNR2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNR2" } ] }, { "name": "MTMR10", "type": "synonym", "evidence": [ { "id": "XP_003121713", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121713" } ] } ], "protein_names": [ { "name": "Myotubularin-related protein 10", "type": "recommended", "evidence": [ { "id": "F1SNR2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNR2/entry#names_and_taxonomy" } ] }, { "name": "Inactive phosphatidylinositol 3-phosphatase 10", "type": "synonym", "evidence": [ { "id": "F1SNR2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNR2/entry#names_and_taxonomy" } ] }, { "name": "myotubularin-related protein 10", "type": "synonym", "evidence": [ { "id": "XP_003121713", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121713" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNR2", "url": "https://www.uniprot.org/uniprotkb/F1SNR2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MTMR10", "url": "https://www.uniprot.org/uniprotkb/F1SNR2", "locus": { "chromosome": "1", "start_pos": 143917878, "end_pos": 143867839, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004844", "url": "https://www.ensembl.org/id/ENSSSCG00000004844" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004844", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004844", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13346", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13346", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14593", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14593", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100525443", "url": "https://www.ncbi.nlm.nih.gov/gene/100525443", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010569", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010569", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022587", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022587", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029021", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030564", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030564", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030573", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030573", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036004", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036004", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525443", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525443", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SNR2", "url": "https://www.orthodb.org/?gene=F1SNR2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10807", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10807", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10807:SF39", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10807:SF39", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06602", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06602", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12578", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12578", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003121713", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121713", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AMY3", "url": "https://www.uniprot.org/uniprotkb/A0A287AMY3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AMY3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AMY3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNR2", "url": "https://www.uniprot.org/uniprotkb/F1SNR2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNR2-1", "url": "https://www.uniprot.org/uniprotkb/F1SNR2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFSLKPPRPTFRSYLLPPPQTDDKINSEPKIKKLEPVLLPGEIVVNEVNFVRKCIASDTSQYDLWGKLICSNFKISFITDDPMPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRKQKVLGPNQKLKFNPTELIIYCKDFRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVGKKYHNSASSINGVPSGGGGGSLGSNQRTPLFETYSDWDREVKRTGASGWRVCSINEGYMISTCLPEYFVVPSSLADQDLKIFSHSFIGRRMPFWCWSHSNGSALVRMALVKDVLQQRRVDQRICNAITKSHPQRSDVYKSDLDKTLPNIQEIQAAFVKLKQLCVNEPFEETEEKWLSSLENTRWLEYVRAFLKHSAELVYMLESKRLSVVLQEEEGRDLSCVVASLIQVMLDPYFRTIAGFQSLIQKEWVMAGYPFLDRCNHLKRSEKEAPLFLLFLDAVWQLLEQYPAAFEFSETYLAVLHDSTRVPLFGTFLFNSPHQRVKQSTEFAISKNIQLGDEKGLKFPSVWDWSLQFTAKDCTLFHNPLYIGKSTPCVQNGSVKSFKRTKKSYSSTLRGMPASLKNGVISDQEFLPRRNSLILKMKPEPPQHSDSQDRGMEQFFREWFSSPVDLHGVILPRLSGAYIKLWKLCYFRWVPEAQIHQGGFITAFHKLSLLADEVDVLSRTLRQHRGLLDTRCAEPDQGRMYFRSSGPHDTSGTPDFLSSSFPFSPVGNLCRRSILGTPLSKFLSGAKIWLSTETLANED", "length": 766, "header": "tr|F1SNR2-1|F1SNR2_PIG Isoform 1 of Myotubularin-related protein 10 OS=Sus scrofa OX=9823 GN=MTMR10 PE=3 SV=4 CANONICAL=F1SNR2-1" }, "isoforms": [ { "isoform_ac": "A0A287AMY3-1", "url": "https://www.uniprot.org/uniprotkb/F1SNR2/entry#A0A287AMY3-1", "sequence": { "sequence": "MFSLKPPRPTFRSYLLPPPQTDDKINSEPKIKKLEPVLLPGEIVVNEVNFVRKCIASDTSQYDLWGKLICSNFKISFITDDPMPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRKQKVLGPNQKLKFNPTELIIYCKDFRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVGKKYHNSASSINGVPSGGGGGSGSNQRTPLFETYSDWDREVKRTGASGWRVCSINEGYMISTCLPEYFVVPSSLADQDLKIFSHSFIGRRMPFWCWSHSNGSALVRMALVKDVLQQRRVDQRICNAITKSHPQRSDVYKSDLDKTLPNIQEIQAAFVKLKQLCVNEPFEETEEKWLSSLENTRWLEYVRAFLKHSAELVYMLESKRLSVVLQEEEGRDLSCVVASLIQVMLDPYFRTIAGFQSLIQKEWVMAGYPFLDRCNHLKRSEKEAPLFLLFLDAVWQLLEQYPAAFEFSETYLAVLHDSTRVPLFGTFLFNSPHQRVKQSTEFAISKNIQLGDEKGLKFPSVWDWSLQFTAKDCTLFHNPLYIGKSTPCVQNGSVKSFKRTKKSYSSTLRGMPASLKNGVISDQEFLPRRNSLILKMKPEPPQHSDSQDRGMEQFFREWFSSPVDLHGVILPRLSGAYIKLWKLCYFRWVPEAQIHQGGFITAFHKLSLLADEVDVLSRTLRQHRGLLDTRCAEPDQGRMYFRSSGPHDTSGTPDFLSSSFPFSPVGNLCRRSILGTPLSKFLSGAKIWLSTETLANED", "length": 765, "header": "tr|A0A287AMY3-1|A0A287AMY3_PIG Computationally mapped isoform of Myotubularin-related protein 10 OS=Sus scrofa OX=9823 GN=MTMR10 PE=3 SV=3 CANONICAL=F1SNR2-1" }, "locus": { "chromosome": "1", "start_pos": 143915379, "end_pos": 143867939, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046959.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046959.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045256.3", "url": "https://www.ensembl.org/id/ENSSSCP00000045256.3" } ] } }, { "isoform_ac": "F1SNR2-1", "url": "https://www.uniprot.org/uniprotkb/F1SNR2/entry#F1SNR2-1", "sequence": { "sequence": "MFSLKPPRPTFRSYLLPPPQTDDKINSEPKIKKLEPVLLPGEIVVNEVNFVRKCIASDTSQYDLWGKLICSNFKISFITDDPMPLQKFHYRNLLLGEHDVPLTCIEQIVTVNDHKRKQKVLGPNQKLKFNPTELIIYCKDFRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLLFAFEYVGKKYHNSASSINGVPSGGGGGSLGSNQRTPLFETYSDWDREVKRTGASGWRVCSINEGYMISTCLPEYFVVPSSLADQDLKIFSHSFIGRRMPFWCWSHSNGSALVRMALVKDVLQQRRVDQRICNAITKSHPQRSDVYKSDLDKTLPNIQEIQAAFVKLKQLCVNEPFEETEEKWLSSLENTRWLEYVRAFLKHSAELVYMLESKRLSVVLQEEEGRDLSCVVASLIQVMLDPYFRTIAGFQSLIQKEWVMAGYPFLDRCNHLKRSEKEAPLFLLFLDAVWQLLEQYPAAFEFSETYLAVLHDSTRVPLFGTFLFNSPHQRVKQSTEFAISKNIQLGDEKGLKFPSVWDWSLQFTAKDCTLFHNPLYIGKSTPCVQNGSVKSFKRTKKSYSSTLRGMPASLKNGVISDQEFLPRRNSLILKMKPEPPQHSDSQDRGMEQFFREWFSSPVDLHGVILPRLSGAYIKLWKLCYFRWVPEAQIHQGGFITAFHKLSLLADEVDVLSRTLRQHRGLLDTRCAEPDQGRMYFRSSGPHDTSGTPDFLSSSFPFSPVGNLCRRSILGTPLSKFLSGAKIWLSTETLANED", "length": 766, "header": "tr|F1SNR2-1|F1SNR2_PIG Isoform 1 of Myotubularin-related protein 10 OS=Sus scrofa OX=9823 GN=MTMR10 PE=3 SV=4 CANONICAL=F1SNR2-1" }, "locus": { "chromosome": "1", "start_pos": 143915379, "end_pos": 143867939, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005346.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005346.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005214.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005214.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNR2", "url": "https://www.uniprot.org/uniprotkb/F1SNR2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525443", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525443", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SNR2", "url": "https://www.uniprot.org/uniprotkb/F1SNR2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SNR2", "url": "https://www.uniprot.org/uniprotkb/F1SNR2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SNT2-1", "uniprot_ac": "F1SNT2", "uniprot_id": "F1SNT2_PIG", "mass": { "chemical_mass": 20977.0, "monoisotopic_mass": 20977.0 }, "refseq": { "ac": "XP_003125045", "name": "transcription factor LBX2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125045" }, "gene_names": [ { "name": "LBX2", "type": "recommended", "evidence": [ { "id": "F1SNT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNT2" } ] }, { "name": "LBX2", "type": "synonym", "evidence": [ { "id": "XP_003125045", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125045" } ] } ], "protein_names": [ { "name": "Ladybird homeobox 2", "type": "synonym", "evidence": [ { "id": "F1SNT2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SNT2/entry#names_and_taxonomy" } ] }, { "name": "transcription factor LBX2", "type": "synonym", "evidence": [ { "id": "XP_003125045", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125045" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SNT2", "url": "https://www.uniprot.org/uniprotkb/F1SNT2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LBX2", "url": "https://www.uniprot.org/uniprotkb/F1SNT2", "locus": { "chromosome": "3", "start_pos": 68552043, "end_pos": 68550166, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008278", "url": "https://www.ensembl.org/id/ENSSSCG00000008278" } ] } } ], "crossref": [ { "id": "F1SNT2", "url": "https://alphafold.ebi.ac.uk/entry/F1SNT2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008278", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008278", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00086", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00086", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100514830", "url": "https://www.ncbi.nlm.nih.gov/gene/100514830", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000047", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000047", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001356", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001356", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009057", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009057", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514830", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514830", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EVQCRLS", "url": "https://omabrowser.org/oma/group/EVQCRLS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SNT2", "url": "https://www.orthodb.org/?gene=F1SNT2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24336", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24336", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24336:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24336:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00046", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00046", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003125045", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003125045", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SNT2", "url": "https://www.uniprot.org/uniprotkb/F1SNT2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SNT2-1", "url": "https://www.uniprot.org/uniprotkb/F1SNT2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSGSEPGTPRTPFSIADILGSRLVPRGPSASQLPESSPGPRSPLCALEELTSKTFRGLDGHAPQPSEGRAAPGALGPGPAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSPEIQCRLALPEGAPGLGPGLARPDAGPHLSDEEIQVDD", "length": 196, "header": "tr|F1SNT2-1|F1SNT2_PIG Isoform 1 of Ladybird homeobox 2 OS=Sus scrofa OX=9823 GN=LBX2 PE=4 SV=1 CANONICAL=F1SNT2-1" }, "isoforms": [ { "isoform_ac": "F1SNT2-1", "url": "https://www.uniprot.org/uniprotkb/F1SNT2/entry#F1SNT2-1", "sequence": { "sequence": "MSSGSEPGTPRTPFSIADILGSRLVPRGPSASQLPESSPGPRSPLCALEELTSKTFRGLDGHAPQPSEGRAAPGALGPGPAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSPEIQCRLALPEGAPGLGPGLARPDAGPHLSDEEIQVDD", "length": 196, "header": "tr|F1SNT2-1|F1SNT2_PIG Isoform 1 of Ladybird homeobox 2 OS=Sus scrofa OX=9823 GN=LBX2 PE=4 SV=1 CANONICAL=F1SNT2-1" }, "locus": { "chromosome": "3", "start_pos": 68551878, "end_pos": 68550253, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009066.3", "url": "https://www.ensembl.org/id/ENSSSCT00000009066.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008838.1", "url": "https://www.ensembl.org/id/ENSSSCP00000008838.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNT2", "url": "https://www.uniprot.org/uniprotkb/F1SNT2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514830", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514830", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7GIG1-1", "protein_name": "Transcription factor LBX2", "gene_name": "Lbx2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MNSGRQRRTPFSISDILGPSMVPRAPSAPQLPEASPDPASPLCALEELTSKTFLGRDPRSLQLSEGRIAPEAPPGPGAGVRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMRADVASLCALSPGVLCHLALPDSASRPDSGPTGPDSEPHLSDEEIQVDD", "length": 194 }, "evidence": [ { "id": "F1SNT2", "url": "https://omabrowser.org/oma/group/F1SNT2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D4A7L0-1", "protein_name": "Ladybird homeobox 2", "gene_name": "Lbx2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNSGRQRRTPFSIADILGRSMVPGAPSEPRLPEAGPDPASPLCALEELASKTFQGHSPRAPQPSEGRAVPEAPPGPGTGVRRRRKSRTAFTPQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMRADLASLCGLSPGVLCPPALPDSASSPDLQPTPSGPDSEPGLSDEEIQVDD", "length": 196 }, "evidence": [ { "id": "F1SNT2", "url": "https://omabrowser.org/oma/group/F1SNT2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1B707-1", "protein_name": "Ladybird homeobox 2", "gene_name": "LBX2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSGSEPRTSLTSFSIADILGSCMIPRRPSVSRPPESNQGPTSPLCALEELTSKTFRGLDGHTPQPSEGRAAPGALGSGQAGRRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLASRLGLANAQVVTWFQNRRAKLKRDVEEMRADLASLRSLSPEAQCRLALPDGAPGLGPGPARPDSELHLSDEEIQVDD", "length": 196 }, "evidence": [ { "id": "F1SNT2", "url": "https://omabrowser.org/oma/group/F1SNT2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6XYB7-1", "protein_name": "Transcription factor LBX2", "gene_name": "LBX2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNSGREPRTPRTLLSIADILAPRMVPRAPSAPQLPESGPGPTSPLCALEELTSKTFRGLDARALQPSEGRAGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADVASLRALSPEVLCSLALPEGAPDPGLCLGPAGPDSRPHLSDEEIQVDD", "length": 198 }, "evidence": [ { "id": "F1SNT2", "url": "https://omabrowser.org/oma/group/F1SNT2/", 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"phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SNT4", "url": "https://www.uniprot.org/uniprotkb/F1SNT4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514636", "name": "", "url": 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"MRLRNQLQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIRDFYQSRGLDRVSQPSGEEPALRGLGLPFTSFDHYYRYDEQLSLCLERLSSGKDKNKNVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNEVLPDHMTMKQLWLSRWFGKPSPLLLQYSVKEKRR", "length": 243 }, "evidence": [ { "id": "F1SNT4", "url": "https://omabrowser.org/oma/group/F1SNT4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R023-1", "protein_name": "Polycomb group RING finger protein 1", "gene_name": "Pcgf1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASPQGGQIAIAMRLRNQLQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVSQPSGEEPALSNLGLPFSSFDHSKAHYYRYDEQLSLCLERLSSGKDKNKNVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNEVLPDHMTMKQLWLSRWFGKPSPLLLQYSVKEKRR", "length": 259 }, "evidence": [ { "id": "F1SNT4", "url": "https://omabrowser.org/oma/group/F1SNT4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BSM1-1", "protein_name": "Polycomb group RING finger protein 1", "gene_name": "PCGF1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASPQGGQIAIAMRLRNQLQSVYKMDPLRNEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVPGLQDSEEKRIREFYQSRGLDRVTQPTGEEPALSNLGLPFSSFDHSKAHYYRYDEQLNLCLERLSSGKDKNKSVLQNKYVRCSVRAEVRHLRRVLCHRLMLNPQHVQLLFDNEVLPDHMTMKQIWLSRWFGKPSPLLLQYSVKEKRR", "length": 259 }, "evidence": [ { "id": "F1SNT4", "url": "https://omabrowser.org/oma/group/F1SNT4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "F1SNT4", "url": 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"evidence": [ { "id": "F1SP05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SP05" } ] }, { "name": "C1H9orf152", "type": "synonym", "evidence": [ { "id": "XP_003122117", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122117" } ] } ], "protein_names": [ { "name": "Chromosome 1 C9orf152 homolog", "type": "synonym", "evidence": [ { "id": "F1SP05", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SP05/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C9orf152 homolog", "type": "synonym", "evidence": [ { "id": "XP_003122117", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122117" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SP05", "url": "https://www.uniprot.org/uniprotkb/F1SP05" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C9orf152", "url": "https://www.uniprot.org/uniprotkb/F1SP05", "locus": { "chromosome": "1", "start_pos": 251210987, "end_pos": 251218124, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005452", "url": "https://www.ensembl.org/id/ENSSSCG00000005452" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005452", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005452", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100512390", "url": "https://www.ncbi.nlm.nih.gov/gene/100512390", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR032738", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032738", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512390", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512390", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MVNAVWI", "url": "https://omabrowser.org/oma/group/MVNAVWI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SP05", "url": "https://www.orthodb.org/?gene=F1SP05", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR36290", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36290", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36290:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36290:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15733", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15733", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003122117", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122117", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SP05", "url": "https://www.uniprot.org/uniprotkb/F1SP05", "database": "UniProtKB", 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"tr|F1SP05-1|F1SP05_PIG Isoform 1 of Chromosome 1 C9orf152 homolog OS=Sus scrofa OX=9823 GN=C9orf152 PE=4 SV=2 CANONICAL=F1SP05-1" }, "locus": { "chromosome": "1", "start_pos": 251218119, "end_pos": 251212467, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005997.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005997.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005848.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005848.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SP05", "url": "https://www.uniprot.org/uniprotkb/F1SP05" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512390", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512390", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A4N9-1", "protein_name": "Similar to human chromosome 9 open reading frame 152", "gene_name": "C5h9orf152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"MATRNNPSPMPMGTAQGDPGEAGTLPGPDAGIRDTSSATQLKTKPKKVRKIKALIIDLGSQYCKCGYAGEPRPTYFISSTVGKRYSEGADAGDTRKETYVGHELLNMEAPLKLINPLKYGIVVDWDCVQNIWEYIFHTAMKILPEEHAVLVSDPPLSPSSNREKYAELMFEAFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYLLQLLNEAGHTFTDDHLHIIEHIKKKCCYSALKPEEELGLRLEELRVDYELPDGKLITIGQERFQCAEMLFKPTLVGSNQPGLPALTAACLSRCQEAGFKEEMAANVLLCGGCTMLDGFPERFQRELCLLCPGDSPAVAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGSAAIYTKC", "length": 417, "header": "tr|F1SP30-1|F1SP30_PIG Isoform 1 of Actin like 7B OS=Sus scrofa OX=9823 GN=ACTL7B PE=3 SV=3 CANONICAL=F1SP30-1" }, "isoforms": [ { "isoform_ac": "F1SP30-1", "url": "https://www.uniprot.org/uniprotkb/F1SP30/entry#F1SP30-1", "sequence": { "sequence": "MATRNNPSPMPMGTAQGDPGEAGTLPGPDAGIRDTSSATQLKTKPKKVRKIKALIIDLGSQYCKCGYAGEPRPTYFISSTVGKRYSEGADAGDTRKETYVGHELLNMEAPLKLINPLKYGIVVDWDCVQNIWEYIFHTAMKILPEEHAVLVSDPPLSPSSNREKYAELMFEAFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYLLQLLNEAGHTFTDDHLHIIEHIKKKCCYSALKPEEELGLRLEELRVDYELPDGKLITIGQERFQCAEMLFKPTLVGSNQPGLPALTAACLSRCQEAGFKEEMAANVLLCGGCTMLDGFPERFQRELCLLCPGDSPAVAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGSAAIYTKC", "length": 417, "header": "tr|F1SP30-1|F1SP30_PIG Isoform 1 of Actin like 7B OS=Sus scrofa OX=9823 GN=ACTL7B PE=3 SV=3 CANONICAL=F1SP30-1" }, "locus": { "chromosome": "1", "start_pos": 249878180, "end_pos": 249876930, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005982.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005982.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005833.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005833.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SP30", "url": "https://www.uniprot.org/uniprotkb/F1SP30" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154383", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154383", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q32L91-1", "protein_name": "Actin-like protein 7B", "gene_name": "ACTL7B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MATRNSSSPKPMGTAQGDPGEAGTLPGPDAGIRDTSSATQLKMKPKKVRKIKALITDLGSQYCKCGYAGEPRPTYFISSTVGKRYSEAADSGDTRKETYVGHELLNMEAPLKLINPLKYGIVVDWDCIQSIWEYIFHTAMKILPEEHAVLVSDPPLSPTSNREKYAELLFETFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYLLQLLNEAGHKFTDDHLHIIEHIKKKCCYSALKPEEELSLCLEDLRVDYELPDGKLISIGQERFQCAEMLFKPTLVGSNQPGLPELTAACLNRCQEAGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSPAVAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGSAAIYSKC", "length": 417 }, "evidence": [ { "id": "F1SP30", "url": "https://omabrowser.org/oma/group/F1SP30/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q4QR76-1", "protein_name": "Actin-like protein 7B", "gene_name": "Actl7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATKNNPSPKPMGTAQGDPGEAGTLPAPEAGIRDTGSTQLKAKPKKIRKIKALVIDLGSQYCKCGYAGEPRPTYFISSTVGKRSAEMAADAGDTFKETYVGHELLNMEASLKLVNPLKHGVVVDWDCIQNIWEYIFHTAMKILPEEHAVLVSDPPLSPTSNREKYAELMFETFGIPAMHVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAGHKFSDDHLHIIEHIKKKCCYAALLPEEEMSLGLDELHVDYELPDGKVITIGQERFRCSEMLFKPSLVGSTQPGLPELTATCLDRCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSPTVAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGCAAIYSKC", "length": 417 }, "evidence": [ { "id": "F1SP30", "url": "https://omabrowser.org/oma/group/F1SP30/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9QY83-1", "protein_name": "Actin-like protein 7B", "gene_name": "Actl7b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATKNSPSPKPMGTAQGDPGEAGTLPAPEAAGIRDTGSTQLKTKPKKIRKIKALVIDLGSQYCKCGYAGEPRPTYFISSTVGKRSAEMAADAGDNFKETYVGHELLNMEASLKLVNPLKHGVVVDWDCIQNIWEYIFHTAMKIMPEEHAVLVSDPPLSPTSNREKYAELLFETFGIPAMHVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAGHKFSDDHLHIIEHIKKKCCYAALLPEEEMSLGLDELHVDYELPDGKIITIGQERFRCSEMLFKPSLVGCTQPGLPELTATCLARCQGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSPTVAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGCAAIYSKC", "length": 418 }, "evidence": [ { "id": "F1SP30", "url": "https://omabrowser.org/oma/group/F1SP30/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y614-1", "protein_name": "Actin-like protein 7B", "gene_name": "ACTL7B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCG00000011913" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011913", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011913", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100627364", "url": "https://www.ncbi.nlm.nih.gov/gene/100627364", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR052270", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052270", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NRWKQFT", "url": "https://omabrowser.org/oma/group/NRWKQFT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22028", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22028", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22028:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22028:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_020925994", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925994", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SP97", "url": "https://www.uniprot.org/uniprotkb/F1SP97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SP97-1", "url": "https://www.uniprot.org/uniprotkb/F1SP97-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLTPQERSSSKKGTGLNRWKQFTRKPSPTKPMFDPDNMEHWIKRVEKASEFAVSNLSRRPWGQIIDLETPEQIEDRDEVYAEAQELVNDWLDTKLKQELASDGEGDAEDTELSSPPFPEVNGHLKYDKFDDLCGYLEEEEESTTVQKFIDHLLHKDVVDSRMLEDLGMNENQDKKQQKDPHLTMEMRHKQVKENRLRREKELERQKIEKTLKKSAFLEAHFLVQEEKKRKALEAKKEEEEIQREMVKLRREIIERRRTVEEAWKIEKKKQDENSPKNPEKGVFQSVHILDAENIAKERKKKLKKLLIQTFKEDCECQKRYFSAWHKLILDHRIKLGKAGTLSDWKVQLKVLRAWRDYTRSQKLGRETQAMENDLREENRKQQLAAEYNRKQVLRHHFTEWQHWHRAEILKRELAITKEETRKKMNELLKAALLGKLSATVSSSSNLLEATAMEDPSRNEEVPLQNVPLDTSDDKPHKTLDLGPFQQPGNKKLRTSSQKAEPIRMGYFHNRHIFQQQLIEKQKKKLQEQQKTILELKKNQQLAEVPQAVGHGDARSCLLSNPREDEQERTCQRLSNSPVESPGTEHGRSESRNSLSGPRRNPRQLMAPHPILKAMEERAVQRAERRRILAERKKKQEEEKLAQLKAQEEERQKREAEEKEAKLEKKREKKRLKKMKELEKQERIKRNQQLDTIAKEHYKKVLLRKKGLEPWKRLRMQSKQNIQVAIEHHSLTLQRKCLLTWFQWSQESLARKIAQADQFYYQILLRRVTRSWLQYLIDLEEEVRKLCVHFLQKKVFRAWYNLVREAKIDSQNKHKIAVEHSDRRILQITFQTWRKFAKFTKEERGKEERREQLRRKVAEILPDFRMFTPL", "length": 870, "header": "tr|F1SP97-1|F1SP97_PIG Isoform 1 of Coiled-coil domain containing 191 OS=Sus scrofa OX=9823 GN=CCDC191 PE=4 SV=2 CANONICAL=F1SP97-1" }, "isoforms": [ { "isoform_ac": "F1SP97-1", "url": "https://www.uniprot.org/uniprotkb/F1SP97/entry#F1SP97-1", "sequence": { "sequence": "MLLTPQERSSSKKGTGLNRWKQFTRKPSPTKPMFDPDNMEHWIKRVEKASEFAVSNLSRRPWGQIIDLETPEQIEDRDEVYAEAQELVNDWLDTKLKQELASDGEGDAEDTELSSPPFPEVNGHLKYDKFDDLCGYLEEEEESTTVQKFIDHLLHKDVVDSRMLEDLGMNENQDKKQQKDPHLTMEMRHKQVKENRLRREKELERQKIEKTLKKSAFLEAHFLVQEEKKRKALEAKKEEEEIQREMVKLRREIIERRRTVEEAWKIEKKKQDENSPKNPEKGVFQSVHILDAENIAKERKKKLKKLLIQTFKEDCECQKRYFSAWHKLILDHRIKLGKAGTLSDWKVQLKVLRAWRDYTRSQKLGRETQAMENDLREENRKQQLAAEYNRKQVLRHHFTEWQHWHRAEILKRELAITKEETRKKMNELLKAALLGKLSATVSSSSNLLEATAMEDPSRNEEVPLQNVPLDTSDDKPHKTLDLGPFQQPGNKKLRTSSQKAEPIRMGYFHNRHIFQQQLIEKQKKKLQEQQKTILELKKNQQLAEVPQAVGHGDARSCLLSNPREDEQERTCQRLSNSPVESPGTEHGRSESRNSLSGPRRNPRQLMAPHPILKAMEERAVQRAERRRILAERKKKQEEEKLAQLKAQEEERQKREAEEKEAKLEKKREKKRLKKMKELEKQERIKRNQQLDTIAKEHYKKVLLRKKGLEPWKRLRMQSKQNIQVAIEHHSLTLQRKCLLTWFQWSQESLARKIAQADQFYYQILLRRVTRSWLQYLIDLEEEVRKLCVHFLQKKVFRAWYNLVREAKIDSQNKHKIAVEHSDRRILQITFQTWRKFAKFTKEERGKEERREQLRRKVAEILPDFRMFTPL", "length": 870, "header": "tr|F1SP97-1|F1SP97_PIG Isoform 1 of Coiled-coil domain containing 191 OS=Sus scrofa OX=9823 GN=CCDC191 PE=4 SV=2 CANONICAL=F1SP97-1" }, "locus": { "chromosome": "13", "start_pos": 145980080, "end_pos": 145880111, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013036.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013036.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012693.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012693.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SP97", "url": "https://www.uniprot.org/uniprotkb/F1SP97" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JUG8-1", "protein_name": "Coiled-coil domain containing 191", "gene_name": "Ccdc191", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPPGRSSSGMSDPCLAIKWRNYNSQHHLKAVWEETRLSLLWPKSRPAPAKMLLAPQGGFASKKRMELSRWKRLSRKLNLKSSFEPDNVGHWIKRVEKASEFAISNTYSTRNADLPGRFWRQAVDLATCEQTEYHDDVYEEAQELVNEWLDNKLKQELASDGEGESTVLSSPPVPDAHGHLKYDRFDDLCGYLEEEEESATVQKFIEHLLHKEVVASEVVEELGMKENQGKRQQKDPRLTMEMRHKQVKENRLRREKQLESQRVESALKKAAFLEAQCLVQEEKKRKALLAKKEKEEIQREMVKLRREILERRHTVEEAWKTEKKRQEESSQRNAERKMMKSAHIHLGEEKVAKERKRELREILIRTFKENQQCQKRYFSAWHKLILDHRIKLGKAGTLSDWKLQLKVLRAWRDHTRSQKLERETKALENDLREENRKQQLATEFNRKQVLRYCFGGWQRWHGSEVIKRELALAKEQTRKKMDELLKAASLGKLNSKGSSGIGLLAEAPAVVDPAVGSGEVTIMSPLWEKPPVENSGCTLSHSPERTTKGNFQGTLPDVSQNTPGTKQAKTAAGETSEQPGSREDPGTTTQEADAVCVGHFRCHHVYQQQLIEKQKKKLEEQQKTIQKLKANQWLAEARQASERTTAATGGHSCSQSNLRGAGDLQGTCQRLLNSSVPSLRCKDSRADSRKPLSPSKRTLKQPTAPHPLLKAMEERAIQRAERRQILAERKKKQEEDKLAQLKSQEEERQKKDAEEKEAQLERKREEKRLKKMKELEKQKRIQRSQELEAVAKGHYEKTLLRKRGLEPWKRLRVQSKQNTEVAEEHHSLTSQRKCLLSWLQYSQERLATMTAKADQFYSQLLCRRVIRGWLQYVSDVEEEVRKLCVYLLQKKTFKAWLSTVKELEMESQKKLKVAAEHCDRKILRVTLEMWKAFVKLTKEDRVREERRDQLRRKVAEILPDFQMLVPS", "length": 967 }, "evidence": [ { "id": "F1SP97", "url": "https://omabrowser.org/oma/group/F1SP97/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0XVT0-1", "protein_name": "Coiled-coil domain containing 191", "gene_name": "CCDC191", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPRGTVGRRAAMALPGRRSRLFRWRRLSAPTGPQATFGSDSTEYWMKRVEQASEYAVSEAFSLQKLRYPQGLCDPAARLETVEQLQEHDEACMEARELLSNWAKSKLQLQLTSDGEAEVGSVLENPTAPLKYTRFDDLYSYLEHELESSSVQEYLQHLLQSEAVNCGIVENLRLEDIKGKQKPADPRITMEIRHKQVKENRLRHQKALELQRQEKALRKAILCEAKLQIQEEDRRKALEAKKEEEEIRREMVKLRKEMAEKRQTMAEAWRMEQKRQEKSQKLSMQEVSINVSPPMDPKKEEQEKEKQRRAQELLSRIHTNKQRCMQRHFSAWFRLILEHRIKMEKARALADWKCQQKVLRAWRNYTWAQKVEQETQQLEFHLQDQNRKNQLSAEHNQRRLLRCCFLAWQHWSQAEADKRELQLKREETKRKMAKLLAAVSGEMGKSGLNRTLEVSKSETAKVNQHQVLQQDELTKTCLIQEEPDQSRDHSCGDAAHTSPSYRKPKFAWQITLKHAALSAQDQVMYRNEIAGLPKQFQAPSPKTAPPYSSCFEHHHTFQQHLIEEQKQQLQKQQELILELQENQRLSRAKEEAVQATAASQAPDSASETREKKLKSRKQSRYQNTTPLSLPVSPEPKNTKAATQGKRPSSQPTHPIVKAMEERAIQRTERRRKLEEAKQRREEEKLAQLKAEEEARQRKEAEEREAQQEKRREEKRQQKLKELEKQRRLEKEQQLQKKARDHYEKALLRKLGMVPWKKLREQAKENLMVAQTHHCLSLQRKCLMSWFQHTQERLMKKVSWAEDFFSHTLIRWCFRRWLKYRDYLSTLEEKANTLHAVCLKRKCFWAWFDLTMEEKSTLREKLKIATDHCNKRLMLDAFKAWRQYPLLMKKEREREERRNQLRRRVAEILPDFQT", "length": 915 }, "evidence": [ { "id": "F1SP97", "url": "https://omabrowser.org/oma/group/F1SP97/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BBW2-1", "protein_name": "Coiled-coil domain containing 191", "gene_name": "CCDC191", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLLAPQDRSSSRKRTGLNRWKQITRKPSPTKPVFDPDNVEHWIKRVEKASEFAVSQVFSAGNSNLSRRLWGQLVDLETLEQIEDHEEVYAEAQELVNDWLDTKLKPELASDGDNDAEDTVSSIRPVPEASGHLKYDRFDDLCGYLEEEDESTTVQKFIDHLLHKDVVDSGILEDLGMNENQDKKWQKDPRLTMEMRHKQVKENRLRREKELERQRIEKTLKKSAFLEAQYLVQEEKKRKALEAKKEEEEIQREMVKLRREIIERRRTVEEAWKIEKKKQENAPKIPEKGTFQSVHILLDEEKMAKERKKKLKELLIQTFKENHQCQKRYFSAWHKLILDHRIKLGKAGTLSDWKLQLKVLRAWRDYTRSQKLGRETQAIENYLREENRKQQLATEHNRKQVLQHHFTEWQHWHRAEILKRELAVTKEETRKKMNELLEAASLGKLSANMSSSIGLLEEATAMEDPPRNGEVAAVPALWEKPPSGSSGCLPSCHLRRPTKSILQVPLQKAPLDTSDSKPHKGPGDEPSQQPGNKKKFRTSSWKAEPVCMGHFCNRHIFQQQLIEKQKKKLQEQQKTILELKENQRLAEVRRAAGHTHPQSCQLSNPGEDEWERTCQVLPNSPVASPGTEGSRSDSRNSLSGPRRNPRQMMAPHPILKAMEERAVQRAERRRILAEKKKKQEEEKLAQLKAQEEERQKREAEEKEAQLEKKREEKRLKKMKELEKQKRIKRNQQLEAIAKEHYERVLLRKKGLEPWKRLKMQSMQNLQVAKEHHSLTLQRKCLLTWFQWSQESLAKKMAQADQFYSQILLRRVIRSWLQHLIDLDEEVRKLCIHFLQKKIFRAWRDMVREARVDSQNKHQIAVEHSDRRILWIMFQTWKKFAKFTKEEREKEERREQLRRKVAEILPDFQMFTLL", "length": 913 }, "evidence": [ { "id": "F1SP97", "url": "https://omabrowser.org/oma/group/F1SP97/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "J3QQ27-1", "protein_name": "Coiled-coil domain containing 191", "gene_name": "Ccdc191", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MELSRWKRLSRKLNLKRVEKASEFAISNTCSTRNADLPGRFWRQAVDLATCEETEYHDDVYEEAQELVNDWLDNKLKQELASDGEGESTVLSSPPVPDAHDHLKYDKFDDLCGYLEEEEESATVQKFIEHLLHKEVVASEMVEELGMEENQDKRQQKDPRLTMEMRHKQVKENRLRREKQLESQRMADALKKAAFLEAQSLVQEEKRRKALLAKKEKEDIQREMVKLRREILERRHTVEEAWKTEKKRQEEISQKNSEGKMMESTHIHLDEEKVAKERKRKLRETLIQTFKENQQCQKRYFSAWHKLILDHRIKLGKAGTLSDWKLQLKVLRAWRDHTRSRKLERETKALENDLREENRKQQLATEFNRKHVLRYCFGEWQRWHGSEVIKRELALAKEQTRKKMDELLKAASLGKLSSKGSSGIGLVAEAVAVMDPAVGSGEVTILSPLWERPPVESSGCTLSHSPERTTKGNCQGPLPDVSGSTPGTEQCKAVAAETSEQPGSCERPGTTRQEAEAACVRHFHRSHVYQQQLIEKQKKKLEQQQKTIQKLKENQRLAEARWAAKRAPAVTEGQNCLQSDPRGARDPQGTCQRLLKCEDSRTDCRKPLSASRRTLKQPTAPHPLLKAMEERAIQRAERRQILAEKKKKQEEDKLAQLKAQEEERQKKDAEEKEAQLERKREERRLKKMKELEKQKRIKRIQELEAVAKGHYERVLLRKKGLEPWKRLRMQSKHNIEVAEKYHSLALQRKCLLNWFQYSQETLAMKTAKADQFYSQLLYRRSIRSWLQYVSDLEKEVRRLCTYLLQKKIFKAWLTTVRELKMDSQRKLKVATEHCDRKILMLTLEMWKAFVKLTKEERVKEERRDHLRRKVSEILPDFQMLVPP", "length": 883 }, "evidence": [ { "id": "F1SP97", "url": "https://omabrowser.org/oma/group/F1SP97/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NCU4-1", "protein_name": "Coiled-coil domain-containing protein 191", "gene_name": "CCDC191", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLLAPQGRSFSKKRMGLNRWKRFTRKPSPKPTFGPDSVEHWIKRVEKASEFAVSNAFFTRNSDLPRSPWGQITDLKTSEQIEDHDEIYAEAQELVNDWLDTKLKQELASEEEGDAKNTVSSVTIMPEANGHLKYDKFDDLCGYLEEEEESTTVQKFIDHLLHKNVVDSAMMEDLGRKENQDKKQQKDPRLTMEMRHKQVKENRLRREKELEYQRIEKTLKKSAFLEAQCLVQEEKKRKALEAKKEEEEIQREMVKLRREIIERRRTVKAAWKIEKKRQEENSQNSSEKVMFQSTHILPDEEKMVKERKRKLKEVLIQTFKENQQCQKRYFAAWHKLILDHRIKLGKAGTLSDWKIQLKVLRAWRDYTRFQKLERETQALENDLREENRKQQLATEYNRKQVLRHCFTEWQHWHGAELLKRELALTKEETRKKMDALLQAASLGKLSANGLSGISLPEEATAMVGPPVKNGQETAVPPLWEKPPLGSSGCMLSPPLGRTTTGNLQGSLQNVSLSAPGNKQHKTLGAEPSQQPGSNETLRTTSQKAEPLCLGHFHNRHVFQQQLIEKQKKKLQEQQKTILELKKNLQLAEAQWAAEHALAVTEAQSHLLSKPREEEPRTCQMLVNSPVASPGTEGRSDSRNSLSGLRRKPKQLMTPHPILKAMEERAIQRAECRRILAEKKKKQEEEKLAQLKAQEEERQKREAEEKEAQLERKREEKRLKKMKELEKQKRIKRNQQLEAIAKEHYERVLLRKKGLEPWKRLRMQSKQNIQVAEEHYSLFLQRKYMLTWFQRSQESLARKMAQADQFYSQILLKRVIQSWLQYVIDLQEEVRKFCVHFLQKKIFRAWFNMVREVKIDSQGKHEIAAEHSDRRILWITLRTWKKFVKFMKEERVKEERRQQLRRKVVEILPDFQVPGRYHELYQQSDTWSLSKTSLVNE", "length": 936 }, "evidence": [ { "id": "F1SP97", "url": "https://omabrowser.org/oma/group/F1SP97/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 56, "end_pos": 58, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 56, "end_pos": 58 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SPA6-1", "uniprot_ac": "F1SPA6", "uniprot_id": "F1SPA6_PIG", "mass": { "chemical_mass": 55666.0, "monoisotopic_mass": 55666.0 }, "refseq": { "ac": "XP_003132704", "name": "transmembrane protein 39A", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132704" }, "gene_names": [ { "name": "TMEM39A", "type": "recommended", "evidence": [ { "id": "F1SPA6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPA6" } ] }, { "name": "TMEM39A", "type": "synonym", "evidence": [ { "id": "XP_003132704", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132704" } ] } ], "protein_names": [ { "name": "Transmembrane protein 39A", "type": "synonym", "evidence": [ { "id": "F1SPA6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPA6/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein 39A", "type": "synonym", "evidence": [ { "id": "XP_003132704", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132704" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPA6", "url": "https://www.uniprot.org/uniprotkb/F1SPA6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM39A", "url": "https://www.uniprot.org/uniprotkb/F1SPA6", "locus": { "chromosome": "13", "start_pos": 140831277, "end_pos": 140797205, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011901", "url": "https://www.ensembl.org/id/ENSSSCG00000011901" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011901", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011901", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100151958", "url": "https://www.ncbi.nlm.nih.gov/gene/100151958", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019397", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019397", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100151958", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100151958", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RFKQLIF", "url": "https://omabrowser.org/oma/group/RFKQLIF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPA6", "url": "https://www.orthodb.org/?gene=F1SPA6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12995", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12995", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12995:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12995:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10271", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10271", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003132704", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132704", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SPA6", "url": "https://www.uniprot.org/uniprotkb/F1SPA6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPA6-1", "url": "https://www.uniprot.org/uniprotkb/F1SPA6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPGGRRGPSRQQLSRSALPSLQTLVGGGCGNGTGLRNRNGSAIGLPVPPITALITPGPVRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEATKAGAASMIHYMVLISARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAHLLLTDYNYVVQHQAVEESASTVGGLAKSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKAN", "length": 488, "header": "tr|F1SPA6-1|F1SPA6_PIG Isoform 1 of Transmembrane protein 39A OS=Sus scrofa OX=9823 GN=TMEM39A PE=3 SV=1 CANONICAL=F1SPA6-1" }, "isoforms": [ { "isoform_ac": "F1SPA6-1", "url": "https://www.uniprot.org/uniprotkb/F1SPA6/entry#F1SPA6-1", "sequence": { "sequence": "MPGGRRGPSRQQLSRSALPSLQTLVGGGCGNGTGLRNRNGSAIGLPVPPITALITPGPVRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEATKAGAASMIHYMVLISARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAHLLLTDYNYVVQHQAVEESASTVGGLAKSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKAN", "length": 488, "header": "tr|F1SPA6-1|F1SPA6_PIG Isoform 1 of Transmembrane protein 39A OS=Sus scrofa OX=9823 GN=TMEM39A PE=3 SV=1 CANONICAL=F1SPA6-1" }, "locus": { "chromosome": "13", "start_pos": 140830425, "end_pos": 140798729, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013023.4", "url": "https://www.ensembl.org/id/ENSSSCT00000013023.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012681.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012681.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPA6", "url": "https://www.uniprot.org/uniprotkb/F1SPA6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100151958", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100151958", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A345-1", "protein_name": "Transmembrane protein 39A", "gene_name": "TMEM39A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPGGRRGPSRQQLSRSALPSLQTLVGGSCGNGTGLRNRNGSAISLSAPPITALITPEPVRHCRIPDLPLDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEASQVGATSVIHYMVRLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAQPLPADCGYLVQDQMVEDGASAVSSLVKPKDFLSLLWESLREQFNNPTSIPTHSCPLSPDLIRNEVECLKADFNRRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPPKYCDLLHRSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRRSRCLYKAVGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVCYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNNYGLKAH", "length": 484 }, "evidence": [ { "id": "F1SPA6", "url": "https://omabrowser.org/oma/group/F1SPA6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A1Z9L5-1", "protein_name": "Transmembrane protein 39A", "gene_name": "Dmel\\CG13016", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MTYDERSSDGSSSSETHDSFAHLLATKQGQSQTPATAMPKHIPFPEHATTSEWLSELIMCAFTMGSAIVQFINIYRTNWWLPQAHTRHMVNIELIDPYLRYLLLILNTRRLIYCLLLVKIRKRNEKSRHLIRLGIKYGFGGLVQLSLGFCAMKLYQKHTYILLLFLFYPVVIYLLIFGFQLEPFLRTRFELPGVYINDLPVHSCTTNPVNIRDEVETLRHDFNKRFKQLIFTSMLNAYYTGLVPCCLAVSVQYNVLRAAQHCIIVCLGAFSLCAVFLYPAKYSDTLHRATLHLGCWQRIDREPAPSQLIVAASALTWSKYSSYNHGTVVKHNGGLYRSHGMVTVATPGNASHARFYKLFHNPTIIYSTLAILQAAVLLVEIGSLSAESVEWHFVLSISFVAFTSMGAFFKLVRDYLITKDLYKAEHAVAPDQPFRQRMRDAFM", "length": 443 }, "evidence": [ { "id": "F1SPA6", "url": "https://omabrowser.org/oma/group/F1SPA6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "G3I1K0-1", "protein_name": "Transmembrane protein 39A isoform X1", "gene_name": "Tmem39a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSRRRGPSRQQLSRSALPSMQTLVGGGCGNGTGLRNRNGSAIGLPVPPITALITPGPVRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEATKAGAASMIHYTALILARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAHLLLTDYVVQHQAVEEGASNVGSLAKSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKAN", "length": 486 }, "evidence": [ { "id": "F1SPA6", "url": "https://omabrowser.org/oma/group/F1SPA6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q0VCF5-1", "protein_name": "Transmembrane protein 39A", "gene_name": "TMEM39A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPGGRRGPSRQQLSRSALPSLQTLVGGGCGNGTGLRNRNGSAIGLPVPPITALITPGPVRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEATKAGASSMIHYMVLISARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAHLLLTDFPYAVQHQAVEESASTVGGLARSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRHSRCLYRAVGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKAN", "length": 488 }, "evidence": [ { "id": "F1SPA6", "url": "https://omabrowser.org/oma/group/F1SPA6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5U2V9-1", "protein_name": "Transmembrane protein 39A", "gene_name": "Tmem39a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPSRRRGPSRQQLSRSALPSIQTLVGGGCGNGTGLRNRNGSAIGLPVPPTTALITPGPVRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYYLAAFITVMLARRLVWALISEATKAGAASMVHYTALILARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLYCFHQDSRAHLLLTDYVVQHQAVEDAASNVGSLTRSKDFLSLLLESLKEQFNNSTPIPTHSCPLSPDLIRNEVECLKADFNHRIKDVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDGSHARFYFLFHRPLRVLNLLILIEGSVIIYQLYSLLRSEKWNHTLSMALVLFCNYYVLFKLLRDRIVLGRAYSYPSTATDSRQTKLPLSSEGELR", "length": 497 }, "evidence": [ { "id": "F1SPA6", "url": "https://omabrowser.org/oma/group/F1SPA6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9CYC3-1", "protein_name": "Transmembrane protein 39A", "gene_name": "Tmem39a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPSRRRGPSRQQLSRSALPSIQTLVGGGCGNGTGLRNRNGNAIGLPVPPTTALITPGPVRHCQIPDLPVDGSLFFEFLFFIYLLIVLFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYYLAAFITVMLARRLVWALISEATKAGAASTVHYTALILARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLYCFHQDSRAHLLLTDYVVQHQAVEEAASNVGSLARSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGFYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRVLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKAN", "length": 486 }, "evidence": [ { "id": "F1SPA6", "url": "https://omabrowser.org/oma/group/F1SPA6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NV64-1", "protein_name": "Transmembrane protein 39A", "gene_name": "TMEM39A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPGGRRGPSRQQLSRSALPSLQTLVGGGCGNGTGLRNRNGSAIGLPVPPITALITPGPVRHCQIPDLPVDGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFHLIDYHLAAFITVMLARRLVWALISEATKAGAASMIHYMVLISARLVLLTLCGWVLCWTLVNLFRSHSVLNLLFLGYPFGVYVPLCCFHQDSRAHLLLTDYNYVVQHEAVEESASTVGGLAKSKDFLSLLLESLKEQFNNATPIPTHSCPLSPDLIRNEVECLKADFNHRIKEVLFNSLFSAYYVAFLPLCFVKSTQYYDMRWSCEHLIMVWINAFVMLTTQLLPSKYCDLLHKSAAHLGKWQKLEHGSYSNAPQHIWSENTIWPQGVLVRHSRCLYRAMGPYNVAVPSDVSHARFYFLFHRPLRLLNLLILIEGSVVFYQLYSLLRSEKWNHTLSMALILFCNYYVLFKLLRDRIVLGRAYSYPLNSYELKAN", "length": 488 }, "evidence": [ { "id": "F1SPA6", "url": "https://omabrowser.org/oma/group/F1SPA6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "negative regulation of autophagosome maturation", "id": "GO:1901097", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901097", "evidence": [ { "database": "UniProtKB", "id": "F1SPA6", "url": "https://www.uniprot.org/uniprotkb/F1SPA6" } ], "pmid": "" }, { "name": "negative regulation of autophagosome assembly", "id": "GO:1902902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902902", "evidence": [ { "database": "UniProtKB", "id": "F1SPA6", "url": "https://www.uniprot.org/uniprotkb/F1SPA6" } ], "pmid": "" }, { "name": "positive regulation of viral genome replication", "id": "GO:0045070", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045070", "evidence": [ { "database": "UniProtKB", "id": "F1SPA6", "url": "https://www.uniprot.org/uniprotkb/F1SPA6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SPA6", "url": "https://www.uniprot.org/uniprotkb/F1SPA6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 31, "end_pos": 33, "annotation": "n_glycosylation_sequon" }, { "start_pos": 39, "end_pos": 41, "annotation": "n_glycosylation_sequon" }, { "start_pos": 446, "end_pos": 448, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 254, "end_pos": 256 }, { "start_pos": 31, "end_pos": 33 }, { "start_pos": 39, "end_pos": 41 }, { "start_pos": 446, "end_pos": 448 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { 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"authors" ] } ] }, { "uniprot_canonical_ac": "F1SPB1-1", "uniprot_ac": "F1SPB1", "uniprot_id": "F1SPB1_PIG", "mass": { "chemical_mass": 39937.0, "monoisotopic_mass": 39937.0 }, "refseq": { "ac": "NP_001231276", "name": "ADP-ribosylarginine hydrolase", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231276" }, "gene_names": [ { "name": "ADPRH", "type": "recommended", "evidence": [ { "id": "F1SPB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPB1" } ] }, { "name": "ADPRH", "type": "synonym", "evidence": [ { "id": "NP_001231276", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231276" } ] } ], "protein_names": [ { "name": "ADP-ribosylhydrolase ARH1", "type": "recommended", "evidence": [ { "id": "F1SPB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPB1/entry#names_and_taxonomy" } ] }, { "name": "3.2.2.19", "type": "synonym", "evidence": [ { "id": "F1SPB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPB1/entry#names_and_taxonomy" } ] }, { "name": "ADP-ribose-L-arginine cleaving enzyme", "type": "synonym", "evidence": [ { "id": "F1SPB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPB1/entry#names_and_taxonomy" } ] }, { "name": "ADP-ribosylarginine hydrolase", "type": "synonym", "evidence": [ { "id": "NP_001231276", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231276" } ] }, { "name": "[Protein ADP-ribosylarginine] hydrolase", "type": "synonym", "evidence": [ { "id": "F1SPB1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPB1/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Specifically acts as an arginine mono-ADP-ribosylhydrolase by mediating the removal of mono-ADP-ribose attached to arginine residues on proteins.", "evidence": [ { "database": "UniProtKB", "id": "F1SPB1", "url": "https://www.uniprot.org/uniprotkb/F1SPB1#function" }, { "database": "UniProtKB", "id": "ARBA00049582", "url": "https://www.uniprot.org/uniprotkb/ARBA00049582#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPB1", "url": "https://www.uniprot.org/uniprotkb/F1SPB1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADPRH", "url": "https://www.uniprot.org/uniprotkb/F1SPB1", "locus": { "chromosome": "13", "start_pos": 140673101, "end_pos": 140681260, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011896", "url": "https://www.ensembl.org/id/ENSSSCG00000011896" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011896", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011896", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153158", "url": "https://www.ncbi.nlm.nih.gov/gene/100153158", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR005502", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005502", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012108", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012108", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050792", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050792", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153158", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153158", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RKWEFLQ", "url": "https://omabrowser.org/oma/group/RKWEFLQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPB1", "url": "https://www.orthodb.org/?gene=F1SPB1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16222", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16222", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16222:SF26", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16222:SF26", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03747", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03747", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231276", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231276", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SPB1", "url": "https://www.uniprot.org/uniprotkb/F1SPB1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPB1-1", "url": "https://www.uniprot.org/uniprotkb/F1SPB1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCGRLIERYVAAMVLSAAGDALGYFNGKWEFLRDGEKIHKQLAQLGGLDAIDVERWRVSDDTVMHLATAEALLEAGPGLDWARLYSLLARHYQDCMGDMDGRAPGGASVQNAMLLEPDKPNGWRIPFNSHEGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALVSALFTAYAVNGKPPRQWGKGLMEVLPEAKKYIVQSGYFVEQNLQHWSYFQDQWEKYLKLRGIWDGKSAPTFPKPFDVKERDQFYTSVSYSGWGGSSGHDAPMIAYDAILAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVSPANYEKLEYRNRLEETARALFSLRSKEEL", "length": 358, "header": "tr|F1SPB1-1|F1SPB1_PIG Isoform 1 of ADP-ribosylhydrolase ARH1 OS=Sus scrofa OX=9823 GN=ADPRH PE=3 SV=1 CANONICAL=F1SPB1-1" }, "isoforms": [ { "isoform_ac": "F1SPB1-1", "url": "https://www.uniprot.org/uniprotkb/F1SPB1/entry#F1SPB1-1", "sequence": { "sequence": "MCGRLIERYVAAMVLSAAGDALGYFNGKWEFLRDGEKIHKQLAQLGGLDAIDVERWRVSDDTVMHLATAEALLEAGPGLDWARLYSLLARHYQDCMGDMDGRAPGGASVQNAMLLEPDKPNGWRIPFNSHEGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALVSALFTAYAVNGKPPRQWGKGLMEVLPEAKKYIVQSGYFVEQNLQHWSYFQDQWEKYLKLRGIWDGKSAPTFPKPFDVKERDQFYTSVSYSGWGGSSGHDAPMIAYDAILAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVSPANYEKLEYRNRLEETARALFSLRSKEEL", "length": 358, "header": "tr|F1SPB1-1|F1SPB1_PIG Isoform 1 of ADP-ribosylhydrolase ARH1 OS=Sus scrofa OX=9823 GN=ADPRH PE=3 SV=1 CANONICAL=F1SPB1-1" }, "locus": { "chromosome": "13", "start_pos": 140678497, "end_pos": 140675438, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013018.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013018.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012676.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012676.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPB1", "url": "https://www.uniprot.org/uniprotkb/F1SPB1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153158", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153158", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7HTA8-1", "protein_name": "ADP-ribosylhydrolase ARH1", "gene_name": "Adprh", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGGGLMERYVAAMVLSAAGDALGYFNGKWEFLRDGEKIHQQLAKMGDLEAVDVAQWRVSDDTVMHLATAEALVEADKFQNLTQLYSLLAKHYQNCMGDMDGRAPGGACMQNAMRLEPNKADGWKIPFNSREGGCGAAMRAMCIGLRFPHPSQLDTLIQVSIESGRMTHHHPTGYLGSLASALFTAYAVNGKPPRQWGKGLMEVLPEAKKYIVQSDYFVKENLQHWSFFEKEWEKYLELRGISDGKSAPVFPESFGVKERDQLYISLSYSGWGGSSGHDAPMIAYDALLGAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVLHGFKGVNPSNYEKLEYRQRLEEAARALYSLGSKEDTVFGP", "length": 362 }, "evidence": [ { "id": "F1SPB1", "url": "https://omabrowser.org/oma/group/F1SPB1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P54922-1", "protein_name": "ADP-ribosylhydrolase ARH1", "gene_name": "ADPRH", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEKYVAAMVLSAAGDALGYYNGKWEFLQDGEKIHRQLAQLGGLDALDVGRWRVSDDTVMHLATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMDGRAPGGASVHNAMQLKPGKPNGWRIPFNSHEGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTGYLGALASALFTAYAVNSRPPLQWGKGLMELLPEAKKYIVQSGYFVEENLQHWSYFQTKWENYLKLRGILDGESAPTFPESFGVKERDQFYTSLSYSGWGGSSGHDAPMIAYDAVLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVSPSNYEKLEYRNRLEETARALYSLGSKEDTVISL", "length": 357 }, "evidence": [ { "id": "F1SPB1", "url": "https://omabrowser.org/oma/group/F1SPB1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P54923-1", "protein_name": "ADP-ribosylhydrolase ARH1", "gene_name": "Adprh", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGGGLIERYVAAMVLSAAGDTLGYFNGKWEFIRDGETIHQQLAQMGDLEAIDVARWRVSDDTVMHLATAEALMEAGQSPDLPRLYSLLAKHYRDCMGDMDGRAPGGACMQNAMLLQPNRADGYRIPFNSHEGGCGAAMRAMCIGLRFPHPSQLDLLIQVSIESGRMTHHHPTGYLGSLASALFTAYAVNGKSPWQWGKGLMEVLPEAKKYITQSGYFVKENLQHWSYFEKEWEKYLELRGILDGNSAPVFPQPFGVKERDQFYIDVSYSGWGGSSGHDAPMIAYDALLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVNPANYEKLEYRQRLEEAGRALYSLGSKEDPVLDP", "length": 362 }, "evidence": [ { "id": "F1SPB1", "url": "https://omabrowser.org/oma/group/F1SPB1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q02589-1", "protein_name": "ADP-ribosylhydrolase ARH1", "gene_name": "Adprh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SPD3-1", "uniprot_ac": "F1SPD3", "uniprot_id": "F1SPD3_PIG", "mass": { "chemical_mass": 88237.0, "monoisotopic_mass": 88237.0 }, "refseq": { "ac": "XP_003132698", "name": "probable G-protein coupled receptor 156 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132698" }, "gene_names": [ { "name": "GPR156", "type": "recommended", "evidence": [ { "id": "F1SPD3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPD3" } ] }, { "name": "GPR156", "type": "synonym", "evidence": [ { "id": "XP_003132698", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132698" } ] } ], "protein_names": [ { "name": "G protein-coupled receptor 156", "type": "synonym", "evidence": [ { "id": "F1SPD3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPD3/entry#names_and_taxonomy" } ] }, { "name": "probable G-protein coupled receptor 156 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003132698", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132698" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPD3", "url": "https://www.uniprot.org/uniprotkb/F1SPD3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GPR156", "url": "https://www.uniprot.org/uniprotkb/F1SPD3", "locus": { "chromosome": "13", "start_pos": 140074166, "end_pos": 140007711, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011888", "url": "https://www.ensembl.org/id/ENSSSCG00000011888" } ] } } ], "crossref": [ { "id": "F1SPD3", "url": "https://alphafold.ebi.ac.uk/entry/F1SPD3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011888", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011888", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd15292", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd15292", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100522832", "url": "https://www.ncbi.nlm.nih.gov/gene/100522832", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002455", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002455", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017978", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017978", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041946", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041946", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522832", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522832", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "THFCASQ", "url": "https://omabrowser.org/oma/group/THFCASQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPD3", "url": "https://www.orthodb.org/?gene=F1SPD3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR10519", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10519", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10519:SF20", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10519:SF20", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00003", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00003", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003132698", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132698", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SPD3", "url": "https://www.uniprot.org/uniprotkb/F1SPD3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPD3-1", "url": "https://www.uniprot.org/uniprotkb/F1SPD3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPEINCSELCDGFPGQELERRPLHELCRTTITSSHHSTKTISSLSPALLGIVWTFLSCGLLLIAFFLGFTIRCRKNRIVKMSSPNLNIVTLLGSCLTYSSAYLFGIQDKGSLAGSSMETLIQVRLSMLCIGTSLVFGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLGLVAALVIADVILLMTWVLTDPIQCLQILSVSMTVTGRDVSCSLTSTHFCASQYSDVWIALALGCKGLLLLYGAYLAGLTDHVSSPPVNQSLTIMVGVNLVVLAAGLLFVVTRYLHSWPNLVFGLTSGGIFVCTTTVNCFIFIPQLKQWKAFEEENQTIRRMAKYFSTPSKSLHTQYGEEQKCHVRGEKNSMERLLTEKNAVIESLQEQVNNAKEKLVRLMSAECPYDPPEGAVPPAASHSKDALAAASPPVLAAQGPSECPSDSQNDTRAATRDSRSISVPSLGVQSFRGPEKDTSPSPGQKEKISGLKDFSDHLSLGCSQKPRAEQSQGAERKEQGPVTLHQNRMPCGEGSVSQRQGQLGNSEEPQEPLARVNAVIREKLQEVLQDLGLNPEAPLPPSCPQQLWKGSAAHSPQKMPLSKELGLSPYLVRRRRAAQRARAHFPGSAPSYVGHRVNRTVSGTHSGLSVQDRDSSCLNPQTADSRVPRPSSGKPLLLPDPPGKPGSQEGSKKRQTEPPGAEGSCPAFPHLPSGSGRALCPATPGLSGASPDLPEQRQWQSPGSPGCLSLSSPCSYLDTESSSSDEFFCRCHRPYCEICFQSSSDSSDSGSSDSDPEPTEGLASWEKLWTRSKPIVNFKDDLKPTLV", "length": 813, "header": "tr|F1SPD3-1|F1SPD3_PIG Isoform 1 of G protein-coupled receptor 156 OS=Sus scrofa OX=9823 GN=GPR156 PE=3 SV=1 CANONICAL=F1SPD3-1" }, "isoforms": [ { "isoform_ac": "F1SPD3-1", "url": "https://www.uniprot.org/uniprotkb/F1SPD3/entry#F1SPD3-1", "sequence": { "sequence": "MEPEINCSELCDGFPGQELERRPLHELCRTTITSSHHSTKTISSLSPALLGIVWTFLSCGLLLIAFFLGFTIRCRKNRIVKMSSPNLNIVTLLGSCLTYSSAYLFGIQDKGSLAGSSMETLIQVRLSMLCIGTSLVFGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLGLVAALVIADVILLMTWVLTDPIQCLQILSVSMTVTGRDVSCSLTSTHFCASQYSDVWIALALGCKGLLLLYGAYLAGLTDHVSSPPVNQSLTIMVGVNLVVLAAGLLFVVTRYLHSWPNLVFGLTSGGIFVCTTTVNCFIFIPQLKQWKAFEEENQTIRRMAKYFSTPSKSLHTQYGEEQKCHVRGEKNSMERLLTEKNAVIESLQEQVNNAKEKLVRLMSAECPYDPPEGAVPPAASHSKDALAAASPPVLAAQGPSECPSDSQNDTRAATRDSRSISVPSLGVQSFRGPEKDTSPSPGQKEKISGLKDFSDHLSLGCSQKPRAEQSQGAERKEQGPVTLHQNRMPCGEGSVSQRQGQLGNSEEPQEPLARVNAVIREKLQEVLQDLGLNPEAPLPPSCPQQLWKGSAAHSPQKMPLSKELGLSPYLVRRRRAAQRARAHFPGSAPSYVGHRVNRTVSGTHSGLSVQDRDSSCLNPQTADSRVPRPSSGKPLLLPDPPGKPGSQEGSKKRQTEPPGAEGSCPAFPHLPSGSGRALCPATPGLSGASPDLPEQRQWQSPGSPGCLSLSSPCSYLDTESSSSDEFFCRCHRPYCEICFQSSSDSSDSGSSDSDPEPTEGLASWEKLWTRSKPIVNFKDDLKPTLV", "length": 813, "header": "tr|F1SPD3-1|F1SPD3_PIG Isoform 1 of G protein-coupled receptor 156 OS=Sus scrofa OX=9823 GN=GPR156 PE=3 SV=1 CANONICAL=F1SPD3-1" }, "locus": { "chromosome": "13", "start_pos": 140072209, "end_pos": 140007910, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000059128.3", "url": "https://www.ensembl.org/id/ENSSSCT00000059128.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047995.3", "url": "https://www.ensembl.org/id/ENSSSCP00000047995.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 709, "start_aa": "Thr", "end_pos": 709, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr709", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 785, "start_aa": "Thr", "end_pos": 785, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr785", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPD3", "url": "https://www.uniprot.org/uniprotkb/F1SPD3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522832", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522832", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A8Y6-1", "protein_name": "G protein-coupled receptor 156", "gene_name": "GPR156", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MELGFNCSDLCDGQPGFGNQEQQQRMLQELCTVTITSSDRSGKSSPSFSAALLGVVWTFLTGGVLLALFFLVFTIRFRKNRIVKMSSPNLNVVTLLGSGLTYTSAYLFGIQEQSLESSGKSVEMLIQLRLCLLCVGTSLVLGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLVMVVVLVLADAVLLFTWVFSDPIQCFRSLSVSLRATEKGMTCSVSRMQSCASLYSDLWLVLILGFKSVLLLYGTYLAGLTDSVSSPPVNQSLTLIVGVNLIFLVAGTVVLIHRFFRAWHNLLFGFTSGGIFVCTTTINCFIFVPQLRQWKTFEEENQTLSHMAKYFSSPSRSYHSVYSEEQLYQLIGEKNSMKQLLTEKNAVIESLQEQVNNAKEKLMRLMSAEGGCSPAVPNPCAQSTGQHCEKCSSAGDVPREHWPLDTEKDGQQTSSVLCALPHCPVPLSSDAQDLWKHVSHERELTEEPECSPTLLFDMGGSLECSPEHAQECGMLAGKHPLEQDASAGVAGEHPPKVSYVSSEKLQEVLQELSLDSRTCSPAFPSHTGRMWGTQEGHPAIRSSLSPYLTRRRRRVLLPPTSTGLPASSRAWCTAGSRPGTRSHGEPAGLGPGKESEGAGRGLPQPSLSSPSIPAKGWPGLRGWAVSGTELEGRRNTSLQDWRQQSSLGVPARPILHSLYHYPDSDSSSSSEEVFPCCHRPCCQLCLQSPRGSLGSSSSSSTETDMEPGGAVGCWLEPQGKTQPVVNFKEDLKPTFV", "length": 763 }, "evidence": [ { "id": "F1SPD3", "url": "https://omabrowser.org/oma/group/F1SPD3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1B8R4-1", "protein_name": "G protein-coupled receptor 156", "gene_name": "GPR156", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNRHIPRGAYDDMEPEINCSELCDGFSGQELERRPLHDLCRTTITSSHHSSKTISSLSPALLGIVWTFLSCGLLLIAFFLGFTIRCRKNRIVKMSSPNLNIVTLLGSCLTYSSAYLFGIHNQGALVGSSMESLIQIRLSMLCIGTSLVFGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLELVAALVIADVILLMTWVLTDPIQCLQILGVSMTVTGRDVSCSLTSTHFCASRYSDVWIALILGCKGLLLLYGAYLAGLTDHVSSPPVNQSLTIMVGVNLVVLAAGLLFVVTRYLYSWPNLVFGLTSGGIFVCTTTINCFIFIPQLKQWKAFEEENQTIRRMAKYFSTPSKSLHTQYGEEQNCHIRGEKNSMERLLTEKNAVIESLQEQVNNAREKLVRLMSAGCSSDLPEEAVPPASSHHKDILATASAHSLAPQGPSECLSDSQNDTSAATQDSQSTSVLASSVQGLRGPVKDTSPSTGQKKKISDLKDLSNPLHLGCSQKPWAEQSQTAERRDQVPMALHQCLMQSEEGSVPQRHGQVENSEGSPEQLGSRVNSVIREKLQEVLQDLGLGPRAPLPSSLSCPQQPWKSITAHSPQKVPLSKEPGFSPSMVRRRRAAQRARSNFLGAVPSYVGHRVNRAISGQNVQDSPCLDPQTADPRVARPSSGNPLVLPAPQGKPGALEGHTQRQAEPRGAERSLESFPQKSSGSGRKLCPAAPRPSRASPDLPGQRQPPGSPGCPSLSSPSSYLDTESSSSDELFCRCHRPYCEICFQSSSDSSDSGSSDTDPEPAGALASWEKLWARSKPIVNFKDDLKPTLV", "length": 820 }, "evidence": [ { "id": "F1SPD3", "url": "https://omabrowser.org/oma/group/F1SPD3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6PCP7-1", "protein_name": "Probable G protein-coupled receptor 156", "gene_name": "Gpr156", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPEINCSEFCDSFPGQELDRRPLHDLCKTTITESQHSSTAASPLSPALLGIMWTFLSCGLLLVLFFLAFTIRCRKNRIVKMSSPNLNVVTLLGSCLTYISAYLFGIQDALEGSSVEALIQTRLSLLCIGTSLVFGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLGLVAALVVADVILLVTWVLTDPIQCLQMLGVSMKVTGRDVSCSLTNTHFCASRYSDVWIALVLGCKGLLLLYGAYLAGLTNHVSSPPVNQSLTIMVGVNLLLLTAGLLFVVTRYLHSWPNLVFGLTSGGIFVCTTTVNCCVFIPQLKQWKAFEGENQTMRHMAKYFSTPSKSFHSQFDEDPSCHLRDEKSCMERLLTEKNAVIESLQEQVSNAKEKLVKLMSAECTYDSPEWAVPDAASARGLALPGPSECPAVSENESGAAARDSLHVPAACQHVQGPGASRRDTSPSPAQQDNMPLKQYCDHLDTGCNQKPKAEQSEGPERGDQEPMAPSQRLMADGVACEPHKPRQSPEGLPKKLPGVSSVVREKLQEVLQELDLGSEAPLSPLPCPQQLWKSTTSRSPQKLSPSKLGFSPYVVRRRRAAQRARSHIPGSVGLNVGHQANSTVSSSQSGLIVQNRDSPRLDHHNARSKVPRSSSVKPSPLSEPRRKQGTLEGSKQCETEPQEAGGACNVAFPCQSSASVQAQSPAAPCLPSSPALPRQRQPRPRLSPGCPSLSSGCYNLDSESSSSDEFFCRCHRPYCEICFQSSLDSNDSDTSDSDLEQASGLASWEKLWARSKPVVNFKDDLKPTLV", "length": 798 }, "evidence": [ { "id": "F1SPD3", "url": "https://omabrowser.org/oma/group/F1SPD3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K451-1", "protein_name": "Probable G protein-coupled receptor 156", "gene_name": "Gpr156", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPEINCSEFCDSFPGQELDRRPLHDLCKTTITDSQHGSADISPLSPALLGVIWTFLSCGLLLVLFFLAFTIRCRKNRIVKMSSPNLNIVTLLGSCLTYSSAYLFGIQDALVGSSVEALIQTRLSLLCIGTTLVFGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLGLVAALVVADVILLVTWVLTDPIQCLQILGVSMKVTGRDVSCSLTNTHFCASRYSDVWIALVLGCKGLLLLYGAYLAGLTNHVSSPPVNQSLTIMVGVNLLLLTAGLLFVVTRYLHSWPNLVFGLTSGGIFVCTTTVNCCVFLPQLRQRKAFEGENQTIRHMAKYFSTPSKTFRSKFDEDQSCHLRDEXSCMERLLTEKNAVIESLQEQVSNAKEKLVKLMSAECALDSPEWAVPAAASAGGPAECXATSEKESGAAAEDSLPASAASQHMQGPGASRRDXSPSPDQKYDMPLKQFCDHLDMGCSQKPKAEQSEGPERGNQEPMAPGQSLMTDGVACEPHRPRQNSEVLPERLPRVSSVVREKLQEVLQELDLGTEAPLSPLPCPQQPWKSNTSGSPQKLSPSKLGFSPYVVRRRRAAQRARSRIPGSVGLKMGHQANNTVSGSQNGLIVQNRDSPRLDHHNARSKEPRSSSVKPSPISAPHQRRGSLEGSKQCETEPQEARGYSVAFPRQPSASAPAQSSTAPCLSSXPALPRQRQPLPLLSPGCPSLSSGCYNLDSESSSSDEFFCRCHRPYCEICFQSSLDSNDSDTSDSDLEQTSGLASWEKLLARSKPVVNFKDDLKPTLV", "length": 792 }, "evidence": [ { "id": "F1SPD3", "url": "https://omabrowser.org/oma/group/F1SPD3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8NFN8-1", "protein_name": "Probable G protein-coupled receptor 156", "gene_name": "GPR156", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPF5", "url": "https://www.uniprot.org/uniprotkb/F1SPF5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KBTBD12", "url": "https://www.uniprot.org/uniprotkb/F1SPF5", "locus": { "chromosome": "13", "start_pos": 72299103, "end_pos": 72365511, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011622", "url": "https://www.ensembl.org/id/ENSSSCG00000011622" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011622", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011622", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18276", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18276", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18485", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18485", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100156499", "url": "https://www.ncbi.nlm.nih.gov/gene/100156499", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156499", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156499", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DYWRDGP", "url": "https://omabrowser.org/oma/group/DYWRDGP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPF5", "url": "https://www.orthodb.org/?gene=F1SPF5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24412:SF491", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24412:SF491", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24681", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24681", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005669876", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669876", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SPF5", "url": "https://www.uniprot.org/uniprotkb/F1SPF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPF5-1", "url": "https://www.uniprot.org/uniprotkb/F1SPF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MECKSEGKEKFQHGLYLLNKIKNMKELAEMIDVVLIAEEEKFPCHRLVLAAFSPYFKAMFTCGLLECTQREVILYDITAESVSVILNYMYSAALEISNANVQTVAMAAYFMQMEEVFQVCQKYMMDHMDASNCVGIYYFAKQIGAEDLADQSKKYLYQHFAEVSLHEEILEIEVHQFLMLIKSDDLNITREESILDLVLRWVNHNRALRTEHLVELLKQVRLQLISPSFLRQALRRNTMLLCDAGCIDIIQNAFKAIKTPQPHALNLRYGMETTSLLLCIGNNSSGIRSRHRNYGDASFCYDPASRKTYFISSPKYGEGLGTVCTGVVMENNTIIVAGEASASRLSRQKSKNVEIYRYHDRGNQFWEKLCTTEFRELYALGSVNNDLYVIGGQMKIKNQYLITNYVDKYSAERDSWKRVAPLPLQLACHAVVTVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLKYDPSQDQWTERAPMQYAKYRFSTAVVNSEIYVLGGIGCIGRDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTSAGAVDGKLYVCGGFHGADRHEVISKEILELDPWENQWNVVAIDVLMHDSYDVCLVARMNPRDLIPPPSDLVEEGGGH", "length": 623, "header": "tr|F1SPF5-1|F1SPF5_PIG Isoform 1 of Kelch repeat and BTB domain containing 12 OS=Sus scrofa OX=9823 GN=KBTBD12 PE=4 SV=1 CANONICAL=F1SPF5-1" }, "isoforms": [ { "isoform_ac": "F1SPF5-1", "url": "https://www.uniprot.org/uniprotkb/F1SPF5/entry#F1SPF5-1", "sequence": { "sequence": "MECKSEGKEKFQHGLYLLNKIKNMKELAEMIDVVLIAEEEKFPCHRLVLAAFSPYFKAMFTCGLLECTQREVILYDITAESVSVILNYMYSAALEISNANVQTVAMAAYFMQMEEVFQVCQKYMMDHMDASNCVGIYYFAKQIGAEDLADQSKKYLYQHFAEVSLHEEILEIEVHQFLMLIKSDDLNITREESILDLVLRWVNHNRALRTEHLVELLKQVRLQLISPSFLRQALRRNTMLLCDAGCIDIIQNAFKAIKTPQPHALNLRYGMETTSLLLCIGNNSSGIRSRHRNYGDASFCYDPASRKTYFISSPKYGEGLGTVCTGVVMENNTIIVAGEASASRLSRQKSKNVEIYRYHDRGNQFWEKLCTTEFRELYALGSVNNDLYVIGGQMKIKNQYLITNYVDKYSAERDSWKRVAPLPLQLACHAVVTVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLKYDPSQDQWTERAPMQYAKYRFSTAVVNSEIYVLGGIGCIGRDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTSAGAVDGKLYVCGGFHGADRHEVISKEILELDPWENQWNVVAIDVLMHDSYDVCLVARMNPRDLIPPPSDLVEEGGGH", "length": 623, "header": "tr|F1SPF5-1|F1SPF5_PIG Isoform 1 of Kelch repeat and BTB domain containing 12 OS=Sus scrofa OX=9823 GN=KBTBD12 PE=4 SV=1 CANONICAL=F1SPF5-1" }, "locus": { "chromosome": "13", "start_pos": 72353729, "end_pos": 72300948, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012719.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012719.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012385.1", "url": "https://www.ensembl.org/id/ENSSSCP00000012385.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPF5", "url": "https://www.uniprot.org/uniprotkb/F1SPF5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156499", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156499", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MG67-1", "protein_name": "Kelch repeat and BTB domain-containing protein 12", "gene_name": "Kbtbd12", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MECQTGGKGKHQHSLTLLDKIKNMKELEEMIDVVLIAEEEKFPCHRLVLASFSPYFKAMFTCGLLECTQREVILYDITAESVSVILNYMYSAVLEINNANVQTVAMAAYFMQMEEVFEVCQKYMMDHMDASNCIGIYYFAKQIGAEDLADQSKKYLYQHFAEVSLHGEILDIEAHQLLALIKSDDLNITREESILDLVLRWVNHNQALRTEHLVELLRQVRLELINASFLRQALRRNTMLLCDGNCIDIIQNAFKAIKMPQQHAPHLRYGMETTSLLLCIGNNSSGIRSRHRNYGDASFCYDPVSRKTYFISSPKYGEGLGTVCTGVVMENNTVIVAGEATASRLSRQKSKNIEIYRYHERGNQFWEKLCTAEFRELYALGSIHNDLYVIGGQMKIKNQYLITNCVDKYSIDQDNWKRVSPLPLQLACHAVVTVNNKLYVIGGWTPQMDLPDEEPDRLSNKLWQYDPSQDQWKERAPMQYSKYRFSAVVVNSEIYVLGGIGCVGRDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTNAGAVDGKLYVCGGFHGADRHEVISKEILELDPWENQWNVVAINVLMHDSYDVCLVARMNPRDLIPPPSDLIEEGDNHRRQR", "length": 627 }, "evidence": [ { "id": "F1SPF5", "url": "https://omabrowser.org/oma/group/F1SPF5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3ZQ37-1", "protein_name": "Kelch repeat and BTB domain containing 12", "gene_name": "Kbtbd12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESKTEGKGKHQHSLNLLDKIKTMKELEEMVDVVLIAEEEKFPCHRLVLAAFSPYFKAMFTCGLLECTQKEVILYDITAESVSVILNYMYSAVLEINNANVQTVAMAAYFMQMEEVFSVCQNYMMDHMDASNCIGIYYFAKQIGAEDLSDQSKKYLYQHFAEVSLHGEILDIEAHQLLALIKSDDLNISREESILDLVLRWVNHNQALRTEHLVELLKQVRLELINASFLRQALRRNTMLLCDGSCIDMIQNAFKAIKTPQQHSSNLRYGMETTSLLLCIGNNSSGIRSRHRSYGDASFCYDPVSQKTYFISSPKYGEGLGTVCTGVVMENNTIIVAGEATATRLSRQKSKNIEIYRYHDRGNRFWEKLCTAEFRELYALGSIHNDLYVIGGQMKVKNQYLITNCVDKYSVDQDNWKRVSPLPLQLACHAVVSVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWRERAPMQYSKYRFSAAVVNSEIYVLGGIGCLGRDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTSAGAVDGKLYVCGGFHGADRHEVISKEILELDPWENQWNVVAVNVLMHDSYDVCLVARMNPRDLIPPPSDLTEEDGDRRQQR", "length": 627 }, "evidence": [ { "id": "F1SPF5", "url": "https://omabrowser.org/oma/group/F1SPF5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MLX7-1", "protein_name": "Kelch repeat and BTB domain containing 12", "gene_name": "KBTBD12", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEYKSEGKEKYQHSLNLLNKIKSMKDLAEMIDVVIIAEGEAFPCHRLVLAAFSPYFKAMFTCGLLECTQREVVLHDITAESVAVLLRYMYHAALEVSNANVQTVAMAAYFMQMEDVFQACQKHMMAHMDASNCVGIYYFAKQIGAEDLADQSRKYLYRHFAEVSLHEEILEVEVHQLLTLIQSDDLNVSREESILDLVLRWVNHRPDRRTEHLVELLKQVRLQLVSPSFLRQALRRNTVLLCDANCIDLIQNAFKAIKTPQPHALSLRYGMETTSLLLCIGTNASGIRSRHRNYGDASFCYDPVSRKTCFISSPKYGEGLGTVCTGVVMEDNSVIVAGEASASKLSRQKSKSVEIYRYHDRGNQFWEKLCTAEFRELYALGAVHNDLYVIGGQMKVKNQYLITNCVDKYSVERDTWKRVSPLPLQLACHAVATVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLRYDPSQDQWTERAPMKYSKYRFSTAVVNSEIYVLGGIGCVGRDKGQVRKCLDAVEIYNPDGDFWREGPPMPVPLLALRSNSTSAGAVDGKLYVCGGFHGADRHEVICKEILELDPWENQWNVVAVDVLMHDSYDVCLVARMNPRDLIPPPSDLVEEGGGR", "length": 623 }, "evidence": [ { "id": "F1SPF5", "url": "https://omabrowser.org/oma/group/F1SPF5/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3ZB90-1", "protein_name": "Kelch repeat and BTB domain-containing protein 12", "gene_name": "kbtbd12", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRAKHGLTLLEQLNRMRDAEQLTDVVLVAEGVSFPCHRAVLSAFSPYFRVMFTCGLRECSNRQVVLRDMPAPSLALLLEYMYSSNLPLTADNVQGISVAAFLLQMDDVFSRCQIYMIDNMDTTNCLGIYYYARDLGAEELADQAQRYLRQHFTEVCYGEEVLELEAHQLGALLSSDDLNVSREESILDVVMRWVKYCPGDVGSEEENRARHLPELLKKVRLPLVGVDYLKGTMKRNTALLVDAECLQIMEEAIEAASLDSDAPPRRLKLRYGMETTDLLLCIGNEGGGIRSRYGSYTERSFCYAPTTGRTLFITSPRYGEALGYVFAGVVTEKNEIVVSGELGARKMARHKDKNVEIFMYNKEAQGSWKHLSSAEYRDSYALSSLGENLYLIGGQMKLKNQYHITNSVERWSLQGGPWRSTAPLPMPLAYHSVVRMKGRLYVLGGRTPQSFRTDDEPDRMSNRLLEYDPETNKWNELGPMKFSKYRCSAVALNGEIYVLGGIGCEGVDRGQSRYCLNVVEIYNPDGDFWRDGPPLPWPLLTLRSNASNAGVVDGKLYVCGYYKGADRHDTITKDILQLDPWENVWTVVAKQALMHDSYDVCLVANLNPRGLMPPPADLVEE", "length": 623 }, "evidence": [ { "id": "F1SPF5", "url": "https://omabrowser.org/oma/group/F1SPF5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3ZCT8-1", "protein_name": "Kelch repeat and BTB domain-containing protein 12", "gene_name": "KBTBD12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MECKIEGKEKYQHSLNLLNKIQNMKELAEMIDVVLTAEGEKFPCHRLVLAAFSPYFKAMFTCGLLECNQREVILYDITAESVSVLLNYMYNAALEINNANVQTVAMAAYFMQMEEVFSVCQKYMMDHMDASNCLGIYYFAKQIGAEDLSDRSKKYLYQHFAEVSLHEEILEIEVHQFLTLIKSDDLNISREESILDLVLRWVNHNKELRTVHLVELLKQVRLELVNPSFLRQALRRNTMLLCDADCVDIIQNAFKAIKTPQQHSLNLRYGMETTSLLLCIGNNSSGIRSRHRSYGDASFCYDPVSRKTYFISSPKYGEGLGTVCTGVVMENNTIIVAGEASASKLSRQKNKNVEIYRYHDRGNQFWEKLCTAEFRELYALGSIHNDLYVIGGQMKIKNQYLITNCVDKYSVERDNWKRVSPLPLQLACHAVVTVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWSVRAPMKYSKYRFSTAVVNSEIYVLGGIGCVGQDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTNAGAVDGKLYVCGGFHGADRHEVISKEILELDPWENQWNVVAINVLMHDSYDVCLVARMNPRDLIPPPSDLVEEGNEH", "length": 623 }, "evidence": [ { "id": "F1SPF5", "url": "https://omabrowser.org/oma/group/F1SPF5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D618-1", "protein_name": "Kelch repeat and BTB domain-containing protein 12", "gene_name": "Kbtbd12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MECKTKGKHQHSLNLLDKIKNMKELEEMIDVVLIAEEEKFPCHRLVLAAFSPYFKAMFTCGLLECTQREVILYDITAESVSVILNYMYSAVLEINNANVQTVAMAAYFMQMEEVFSVCQNYMMDHMDASNCIGIYYFAKQIGAEDLSDQSKKYLYQHFAEVSLHGEILDIEAHQLLALIKSDDLNISREESILDLVLRWVNHNQALRTEHLVELLKQVRLELINASFLRQALRRNTMLLCDGSCIDIIQNAFKAIKTPQQHPSNLRYGMETTSLLLCIGNNSSGIRSRHRSYGDASFCYDPVSHKTYFISSPKYGEGLGTVCTGVVMENNTVIVAGEATATRLSRQKSKNIEIYRYHDRGNQFWEKLCTAEFRELYALGSIHNDLYVIGGQMKIKNQYLITNCVDKYSVDQDNWKRVSPLPLQLACHAVVTVNNKLYVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWRERAPMRYSKYRFSAAVVNSEIYVLGGIGCVGRDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTSAGAVDGKLYVCGGFHGADRHEVISKEILELDPWENQWNVVAINVLMHDSYDVCLVARMNPRDLIPPPSDLIEEDGDHRGQR", "length": 625 }, "evidence": [ { "id": "F1SPF5", "url": "https://omabrowser.org/oma/group/F1SPF5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SPF5", "url": "https://www.uniprot.org/uniprotkb/F1SPF5" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "F1SPF5", "url": "https://www.uniprot.org/uniprotkb/F1SPF5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F1SPF5", "url": "https://www.uniprot.org/uniprotkb/F1SPF5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "F1SPF5", "url": "https://www.uniprot.org/uniprotkb/F1SPF5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 187, "end_pos": 189, "annotation": "n_glycosylation_sequon" }, { "start_pos": 282, "end_pos": 284, "annotation": "n_glycosylation_sequon" }, { "start_pos": 283, "end_pos": 285, "annotation": "n_glycosylation_sequon" }, { "start_pos": 331, "end_pos": 333, "annotation": "n_glycosylation_sequon" }, { "start_pos": 543, "end_pos": 545, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPF5" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 31, "end_pos": 98, "start_aa": "Ile", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 187, "end_pos": 189 }, { "start_pos": 282, "end_pos": 284 }, { "start_pos": 283, "end_pos": 285 }, { "start_pos": 331, "end_pos": 333 }, { "start_pos": 543, "end_pos": 545 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": 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"R-SSC-4551638", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4551638", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-4570464", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4570464", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-4615885", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-4615885", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287ALQ1", "url": "https://www.uniprot.org/uniprotkb/A0A287ALQ1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ALQ1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ALQ1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPG4", "url": "https://www.uniprot.org/uniprotkb/F1SPG4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPG4-1", "url": "https://www.uniprot.org/uniprotkb/F1SPG4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPTGCRVPGLPSGQQVHGLSSLEPQAGFSHRYFQFCRIVLEVTVDHGVVSMSRLLFEVLNRAVCKEGLGPAVSAGLEADGVSPLHPASGATVLLIPAPPLWAAPENKFLSSLHRSSTRPEVAGIEPLGLEEQQCSQKAVVQARLSQPARLTSIIFAEDITTGQVLRCDAIVDLIHGIQIVSTTRELYLEDSPLELKVQALDSEGNTFSTLAGLVFDWTIVKDTEADGYSDTHNALRILPFLESTYIPPSYISEMEKAAKQGDTILVSGMKTGSSKLKARIQEAVYKNVPPAEVRLLILENILLNPAYDVYLMVGTSIRYKVQKIRQGKIAELSMPSDQYELQLQDNVWGPEGDPGRPVAVLAQDTSTVTAVQLGQSSLVLGHKNILFRQPSRLPNSTVYVVEPGYLGFTVQPGGRWVLETGRLYEVTVEVLDKSGNKIYLSDNIRIETTLPAEFFEVLASSQNGSHHHVRATKKGQTAIEAALTSVVDQARVHTLRVPMWNQQEVEIHVPITLYPSILTFPWQPKTGAYQYTIKAHGGSGNFTWSSSSSMVATVTVKGVMTTGSDIGLSVIQAHDVQNPLHFGEMKVYVIEPSGMEFAPCPVEARVGQTLELPLRISGLMPGGADEVVTLSDCSHFDLAVEVENQGVFQPLPGRLRPGPEHCSGVTVRAEAQGHTTLLVTYKHGHIHLSARITIAAYLPLKAVDPSAVALVTLGSSKEMLFEGGPRPWVLEPSKFFRNVTSEDKESISLALFGPPASRNYQQHWILVTCQVLGEQVIALTVGNKPSITNPFPALEPAVVKFVCAPPSRLTLTPVYASPQLDLSCPLLQQNKQVVPVSSHRNPLLDLAAYDQQGRRFDNFSSLSIQWESSRPSLASVELDLPLQLVSRDDGSGQKKGHGLQAISVHEASGTTAISATATGYQQSHLDAAGVRQPHDPLLPVSASIELILVEDVRVSPEEVTIYNHPGVQVELHIREGSGYFFLNTSSADVIRVAYQEARGVAMVHPLLPGTTTIMIHDLCLAFPAPAKAAVYISDIQELYIRVVDKVEIGKMVKAYVRVLDFHKKPFLAKYLAFMDLKLRAASQIVTLVALDEAPDDYTATFRVHGVAIGQTSLTASVTDKAGQRINSAPQQIEVFPPFRLIPRKVTLIIGATMQITSEGGPQPQSNILFAVSNESVAVVTGAGLVRGLAVGNGTVSGVVQAVDAETGKLVIVSQDLVEVEVLRLQAVRIRAPITRMRTGTQMPVYVTGITNNQNPFSFGNAVPGLTFHWSVTKRDILDIRGRHHEASLRLPSQYNFAMNVHGRAKGRTGLRVVVKALDPTAGQLLGLAKELSDEIQIQVFEKLRLLNPEIEAEHVLMSPNSFIKLQTNRDGAASLSYRILDGPEKVPVVHIDEKGFLVSGSLIGTSTVEVTAQEAFGANQTIIVAVKVSPVSYLRISMGPALHTQNKEALAALPLGVTVTFTVHFHDNSGDVFHAHNSVLNFATNRDEFVQIGKGATNNTCVVRTVSVGLTLLRAWDSEHGGLSDFVPLPVLQAISPELSGAVVVGDVLCLTTVLVSPEGVPGIWSSSASSILHVDPKTGVAMAREAGSVTIYYEVAGHLRTYKEIVVSTSQRIVAQYVRPVQTGFQEGEASKVMITVGERSSNLKGECSPAQVGGIAALHPESLLSCQLQFEQDVFDFPAREVFTAEPEFDAALGRYLCSITMLRLTDKQLKHLNMRRTALLVTASILGSPSSGEQIGAEVPFSPGLYADQAEILLSNHFTSSEVKVFGAMEVLENLEVKSGSPAVLAFVKEKSLGLPSFITYTVGVSDPAAGSQGPLSTTLTFSSPTTNQAITIPVTVAFVMDRRGPGPHGAGLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTPREPAAPPALSPQASPRHSPHYFAASPSPTPFNALPPVRRASPPSGLWSPSYPSH", "length": 1945, "header": "tr|F1SPG4-1|F1SPG4_PIG Isoform 1 of Nucleoporin 210 OS=Sus scrofa OX=9823 GN=NUP210 PE=1 SV=4 CANONICAL=F1SPG4-1" }, "isoforms": [ { "isoform_ac": "A0A287ALQ1-1", "url": "https://www.uniprot.org/uniprotkb/F1SPG4/entry#A0A287ALQ1-1", "sequence": { "sequence": 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"PF06747", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06747", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001230428", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001230428", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SPI0", "url": "https://www.uniprot.org/uniprotkb/F1SPI0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPI0-1", "url": "https://www.uniprot.org/uniprotkb/F1SPI0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAYCRQEGKDRIIFVTKEDHETPSNAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMASGPCGEQFKSAFSCFHYSTEEVKGSDCVDQFRAMQECMQKYPDLYPQEEEEEEERPSDQSEETAAAEASATKEEEGSS", "length": 138, "header": "tr|F1SPI0-1|F1SPI0_PIG Isoform 1 of Mitochondrial intermembrane space import and assembly protein 40 OS=Sus scrofa OX=9823 GN=CHCHD4 PE=4 SV=1 CANONICAL=F1SPI0-1" }, "isoforms": [ { "isoform_ac": "F1SPI0-1", "url": "https://www.uniprot.org/uniprotkb/F1SPI0/entry#F1SPI0-1", "sequence": { "sequence": "MAYCRQEGKDRIIFVTKEDHETPSNAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMASGPCGEQFKSAFSCFHYSTEEVKGSDCVDQFRAMQECMQKYPDLYPQEEEEEEERPSDQSEETAAAEASATKEEEGSS", "length": 138, "header": "tr|F1SPI0-1|F1SPI0_PIG Isoform 1 of Mitochondrial intermembrane space import and assembly protein 40 OS=Sus scrofa OX=9823 GN=CHCHD4 PE=4 SV=1 CANONICAL=F1SPI0-1" }, "locus": { "chromosome": "13", "start_pos": 70428125, "end_pos": 70417498, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012701.3", "url": "https://www.ensembl.org/id/ENSSSCT00000012701.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012368.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012368.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPI0", "url": "https://www.uniprot.org/uniprotkb/F1SPI0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154663", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154663", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q2KHZ4-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "CHCHD4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAYCRQEGKDRIIFVTKEDHETPSNAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMASGPCGEQFKAAFSCFHYSKEDVKGSDCVDQFRAMQECMQKYPDLYPQEEEEEEEQPADPLPEAASEASATKEAAASS", "length": 137 }, "evidence": [ { "id": "F1SPI0", "url": "https://omabrowser.org/oma/group/F1SPI0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5BJN5-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "Chchd4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSYCRQEGKDRIIFVTKEDHETPSSAELVADDPNDPYEEHGLILPNGDINWNCPCLGGMASGPCGEQFKSAFSCFHYSTEDIKGSDCIDQFRAMQECMQKYPDLYPQDEEEEEEAKPVEPVEETADTKASAAKEQGASS", "length": 139 }, "evidence": [ { "id": "F1SPI0", "url": "https://omabrowser.org/oma/group/F1SPI0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { 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"url": "https://www.uniprot.org/uniprotkb/F1SPI2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPKRSAGRAPRGRKLRGQKAKGEGKARREEKEADVSEDEKPLKKSLLSKVSRGKRKSSCGASGGPAAGPARKKVARATVKLETPQVVKDEALSDEDDFRDFTSARKKTHLPKKEAAVDTGACEGDAEEDSEDDWEEVEELTEPVPGGLGENTAFSKSAVPVKPVEIEIETPEQVKARERSEKIKMEFETQLRRMMKRFNKEVHEDTHKVHLLCLLANGFYRNSICSQPDLRAIGLSIIPTRFTKVPPQDVDVCYLSNLVKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDDEELVHIFLLIIRALHLSARLVLSLQPIPLKSSAAKGKKASKERSTEGPGCSSETSSPGPAKQTKLKSSSGNRREDPSSEGTSGPRAKGKGSKAAAATKKQREPSSSGEEEGKAAGQQGEARRPARGRRRQAATRVSYKEESGSDKASSSSDFELSSGDSHCPSDEDSEPGLRRQRRAPGLPRTKAGAKSDSRSQRGSHPKPPGFLAASAGPPGSKRKGGKKTSVRGEEADGGKVAGVDHWLEVFCEREDKWVCVDCVHGVVGQPLTCYQYATKPMTYVVGIDGDGWVRDVTQRYDPAWMTATRKCRVDAVWWAETLRPYRSPLLEREQREDQEFQAKHLDQPMPTVIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQGRVVRLGEVPYKMVKGYSNRARKARLAEPQLRDHNDLPLFGQWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLQRVARKLNIDCVQAITGFDFHKGYSHPITDGYIVCEEYRDILLAAWENEQALIEKKEKEKKEKRTLGNWKLLVKGLLIRERLRLRYGTQSKTAAPHTDTGGLSSDEEEGTSSQGEAARILAASWPQNREAEEERERKCPKRTRREKKEAASHLFPFEKM", "length": 944, "header": "tr|F1SPI2-1|F1SPI2_PIG Isoform 1 of p125 OS=Sus scrofa OX=9823 GN=XPC PE=1 SV=1 CANONICAL=F1SPI2-1" }, "isoforms": [ { "isoform_ac": "A0A287ABD7-1", "url": "https://www.uniprot.org/uniprotkb/F1SPI2/entry#A0A287ABD7-1", "sequence": { "sequence": "MAPKRSAGRAPRGRKLRGQKAKGEGKARREEKEADVSEDEKPLKKSLLSKVSRGKRKSSCGASGGPAAGPARKKVARATVKLETPQVVKDEALSDEDDFRDFTSARKKTHLPKKEAAVDTGACEGDAEEDSEDDWEEVEELTEPVPGGLGENTAFSKSAVPVKPVEIEIETPEQVKARERSEKIKMEFETQLRRMMKRFNKEVHEDTHKVHLLCLLANGFYRNSICSQPDLRAIGLSIIPTRFTKVPPQDVDVCYLSNLVKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDDEELVHIFLLIIRALHLSARLVLSLQPIPLKSSAAKGKKASKERSTEGPGCSSETSSPGPAKQTKLKSSSGNRREDPSSEGTSGPRAKGKGSKAAAATKKQREPSSSGEEEGKAAGQQGEARRPARGRRRQAATRVSYKEESGSDKASSSSDFELSSGDSHCPSDEDSEPGLRRQRRAPGLPRTKAGAKSDSRSQRGSHPKPPGFLAASAGPPGSKRKGGKKTSVRGEEADGGKVAGVDHWLEVFCEREDKWVCVDCVHGVVGQPLTCYQYATKPMTYVVGIDGDGWVRDVTQRYDPAWMTATRKCRVDAVWWAETLRPYRSPLLEREQREDQEFQAKHLDQPMPTVIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQGRVVRLGEVPYKMVKGYSNRARKARLAEPQLRDHNDLPLFGQWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLQRVARKLNIDCVQAITGFDFHKGYSHPITDGYIVCEEYRDILLAAWENEQALIEKKEKEKKEKRTLGNWKLLVKGLLIRERLRLRYGTQVSVVLVGSLSALSQCPRPVSPTPCVLSSLGKFPRIGPHRLKSTPTGVRFGILQSPGLLMPRGACSTPLHSTCSPHGSHQGTEASGRGYMEGPVLSQGCGDVLLGQLSPHCSVPPLPSHALPLLLAPPPSAVTPASRVPPALSWF", "length": 1018, "header": "tr|A0A287ABD7-1|A0A287ABD7_PIG Computationally mapped isoform of p125 OS=Sus scrofa OX=9823 GN=XPC PE=1 SV=1 CANONICAL=F1SPI2-1" }, "locus": { "chromosome": "13", "start_pos": 70396120, "end_pos": 70348936, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040748.3", "url": "https://www.ensembl.org/id/ENSSSCT00000040748.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041133.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041133.1" } ] } }, { "isoform_ac": "A0A287AP68-1", "url": "https://www.uniprot.org/uniprotkb/F1SPI2/entry#A0A287AP68-1", "sequence": { "sequence": "MLCRHETKGPRLRVLWCVESPRFGSHLTTCISNVSEDEKPLKKSLLSKVSRGKRKSSCGASGGPAAGPARKKVARATVKLETPQVVKDEALSDEDDFRDFTSARKKTHLPKKEAAVDTGACEGDAEEDSEDDWEEVEELTEPVPGGLGENTAFSKSAVPVKPVEIEIETPEQVKARERSEKIKMEFETQLRRMMKRFNKEVHEDTHKVHLLCLLANGFYRNSICSQPDLRAIGLSIIPTRFTKVPPQDVDVCYLSNLVKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDDEELVHIFLLIIRALHLSARLVLSLQPIPLKSSAAKGKKASKERSTEGPGCSSETSSPGPAKQTKLKSSSGNRREDPSSEGTSGPRAKGKGSKAAAATKKQREPSSSGEEEGKAAGQQGEARRPARGRRRQAATRVSYKEESGSDKASSSSDFELSSGDSHCPSDEDSEPGLRRQRRAPGLPRTKAGAKSDSRSQRGSHPKPPGFLAASAGPPGSKRKGGKKTSVRGEEADGGKVAGVDHWLEVFCEREDKWVCVDCVHGVVGQPLTCYQYATKPMTYVVGIDGDGWVRDVTQRYDPAWMTATRKCRVDAVWWAETLRPYRSPLLEREQREDQEFQAKHLDQPMPTVIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQGRVVRLGEVPYKMVKGYSNRARKARLAEPQLRDHNDLPLFGQWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLQRVARKLNIDCVQAITGFDFHKGYSHPITDGYIVCEEYRDILLAAWENEQALIEKKEKEKKEKRTLGNWKLLVKGLLIRERLRLRYGTQSKTAAPHTDTGGLSSDEEEGTSSQGEAARILAASWPQNREAEEERERKCPKRTRREKKEAASHLFPFEKM", "length": 942, "header": "tr|A0A287AP68-1|A0A287AP68_PIG Computationally mapped isoform of p125 OS=Sus scrofa OX=9823 GN=XPC PE=1 SV=2 CANONICAL=F1SPI2-1" }, "locus": { "chromosome": "13", "start_pos": 70396578, "end_pos": 70349379, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000048305.3", "url": "https://www.ensembl.org/id/ENSSSCT00000048305.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045860.2", "url": "https://www.ensembl.org/id/ENSSSCP00000045860.2" } ] } }, { "isoform_ac": "A0A287ASM2-1", "url": "https://www.uniprot.org/uniprotkb/F1SPI2/entry#A0A287ASM2-1", "sequence": { "sequence": "MLLGPKEGEKSCHSGSTTFSSGRLGHMRNFRPEPCCTSEKIKMEFETQLRRMMKRFNKEVHEDTHKVHLLCLLANGFYRNSICSQPDLRAIGLSIIPTRFTKVPPQDVDVCYLSNLVKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDDEELVHIFLLIIRALHLSARLVLSLQPIPLKSSAAKGKKASKERSTEGPGCSSETSSPGPAKQTKLKSSSGNRREDPSSEGTSGPRAKGKGSKAAAATKKQREPSSSGEEEGKAAGQQGEARRPARGRRRQAATRVSYKEESGSDKASSSSDFELSSGDSHCPSDEDSEPGLRRQRRAPGLPRTKAGAKSDSRSQRGSHPKPPGFLAASAGPPGSKRKGGKKTSVRGEEADGGKVAGVDHWLEVFCEREDKWVCVDCVHGVVGQPLTCYQYATKPMTYVVGIDGDGWVRDVTQRYDPAWMTATRKCRVDAVWWAETLRPYRSPLLEREQREDQEFQAKHLDQPMPTVIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQGRVVRLGEVPYKMVKGYSNRARKARLAEPQLRDHNDLPLFGQWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLQRVARKLNIDCVQAITGFDFHKGYSHPITDGYIVCEEYRDILLAAWENEQALIEKKEKEKKEKRTLGNWKLLVKGLLIRERLRLRYGTQSKTAAPHTDTGGLSSDEEEGTSSQGEAARILAASWPQNREAEEERERKCPKRTRREKKEAASHLFPFEKM", "length": 801, "header": "tr|A0A287ASM2-1|A0A287ASM2_PIG Computationally mapped isoform of p125 OS=Sus scrofa OX=9823 GN=XPC PE=1 SV=1 CANONICAL=F1SPI2-1" }, "locus": { "chromosome": "13", "start_pos": 70396578, "end_pos": 70370295, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054804.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054804.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047080.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047080.1" } ] } }, { "isoform_ac": "F1SPI2-1", "url": "https://www.uniprot.org/uniprotkb/F1SPI2/entry#F1SPI2-1", "sequence": { "sequence": "MAPKRSAGRAPRGRKLRGQKAKGEGKARREEKEADVSEDEKPLKKSLLSKVSRGKRKSSCGASGGPAAGPARKKVARATVKLETPQVVKDEALSDEDDFRDFTSARKKTHLPKKEAAVDTGACEGDAEEDSEDDWEEVEELTEPVPGGLGENTAFSKSAVPVKPVEIEIETPEQVKARERSEKIKMEFETQLRRMMKRFNKEVHEDTHKVHLLCLLANGFYRNSICSQPDLRAIGLSIIPTRFTKVPPQDVDVCYLSNLVKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDDEELVHIFLLIIRALHLSARLVLSLQPIPLKSSAAKGKKASKERSTEGPGCSSETSSPGPAKQTKLKSSSGNRREDPSSEGTSGPRAKGKGSKAAAATKKQREPSSSGEEEGKAAGQQGEARRPARGRRRQAATRVSYKEESGSDKASSSSDFELSSGDSHCPSDEDSEPGLRRQRRAPGLPRTKAGAKSDSRSQRGSHPKPPGFLAASAGPPGSKRKGGKKTSVRGEEADGGKVAGVDHWLEVFCEREDKWVCVDCVHGVVGQPLTCYQYATKPMTYVVGIDGDGWVRDVTQRYDPAWMTATRKCRVDAVWWAETLRPYRSPLLEREQREDQEFQAKHLDQPMPTVIGTYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQGRVVRLGEVPYKMVKGYSNRARKARLAEPQLRDHNDLPLFGQWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLNLPNLQRVARKLNIDCVQAITGFDFHKGYSHPITDGYIVCEEYRDILLAAWENEQALIEKKEKEKKEKRTLGNWKLLVKGLLIRERLRLRYGTQSKTAAPHTDTGGLSSDEEEGTSSQGEAARILAASWPQNREAEEERERKCPKRTRREKKEAASHLFPFEKM", "length": 944, "header": "tr|F1SPI2-1|F1SPI2_PIG Isoform 1 of p125 OS=Sus scrofa OX=9823 GN=XPC PE=1 SV=1 CANONICAL=F1SPI2-1" }, "locus": { "chromosome": "13", "start_pos": 70396578, "end_pos": 70348936, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012699.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012699.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012366.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012366.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514251", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514251", "resource": "KEGG Pathway" }, { "id": "R-SSC-3108214", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3108214", "resource": "Reactome", "description": "SUMOylation of DNA damage response and repair proteins" }, { "id": "R-SSC-5696394", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5696394", "resource": "Reactome", "description": "DNA Damage Recognition in GG-NER" }, { "id": "R-SSC-5696395", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5696395", "resource": "Reactome", "description": "Formation of Incision Complex in GG-NER" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A3D8-1", "protein_name": "p125", "gene_name": "Xpc", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQTLRPFHLSREQTLGNVGPPRTGRRTTLFLSLRALVVCMGAGFFGGRGPIRSWGCGQAWHASGRSRHAETFGSPAWLSGGTPLASMARKRTAGGKRRKRGQEAEDNKATRPEESDADDFEDEKQKPPRKCFLPKVSQGKRKRDCSDPGDPTNGAAKKKVAKATTKSKNLKAVKEEALSDDGDDFRDSLSNCRKAKKHPKREVVDQGTDEDDSEDDWEEVEELTEPVLDMGENSATSRSDLPVKAVEIEIETPEQAKARERSEKIKMEFETYLRRMMKRFNKEVQENMHKVHLLCLLASGFYRNSICQQPDLLAIGLSIIPIRFTKVPLQDRDVYYLSNLVKWFIGTFTVNADLSASEQDSLQTTLERRIAIYSARDNEELVHIFLLILRALQLLTRLVLSLQPIPLKSAVAKGKKSSKETSLEGPGDSSEPSSNIPESHNKPKTSKRIKQEETLSEGSGKANARGKRGTATAGSRQQRKPSCSEGEEAKQEIQSHPQAQKRRVAAKVSYKEESESDGAGSGSDFELSSGEGQHSSDEDCKPGPRKQKRASAPQRSKAGSKSASKTQSGSQWEPPSFSVASSSSSACKRGKKISCGGEETDDRKAAGVDQWLEVFCEPQAKWVCVDCVHGVVGQPVACYKYATKPMTYVVGIDSDGWVRDVTQRYDPAWMTATRKCRVDAEWWAETLRPYRSPLTEREKKEDQEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIYPESAAVLGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLSEPQLHDHNDLGLFGHWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQMNLPNLHRVARKLGIDCVQAITGFDFHGGYCHPVTDGYVVCEEFRDVLLAAWENEQALIEKKEKEKKEKRALGNWKLLVRGLLIRERLKLRYGAKSEAAAPHANAGGGLSSDEEEGTSSQAEAARVLAASWPQNRETKEEQKPDYTKMTRRRRAAEASHLFPFEKL", "length": 1020 }, "evidence": [ { "id": "F1SPI2", "url": "https://omabrowser.org/oma/group/F1SPI2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3GS15-1", "protein_name": "p125", "gene_name": "Xpc", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAPKRPAGGRRRGRGREAENNKAARPEESEADDFEDEKQKPPKKCPLSKVSQRKRKRACSDPGDPTKGPSKKKVAKATAKSENLKAPKEEALSDGDDFRDPPGDCKKSKKHPKREVVDEGSDEDEDSEDDWEEVEELTEPMLDTGENPSTSQSVLPVKAVEIEIETPEQAKARKRSEKIKMELEMYLRRMMKRFNKEVQENMHKVHLLCLLASGFYRNSICRQPDLLAIGLSIIPTRFTKVPLKDRDICFLSNLVKWFIGTFTVNEDLSASEQDSLQTTLERRIAIYSARDEEELVHIFLLILRALQLLTRLVLSLQPIPLKSSVTKGKKSSKETSLESPGGSSEPSSQVLESHNRPKTSKRIKQEETVSEDSDKANTRGKKSKAVDSRQRRKPSCSEGEETKPKTQSRAHARQRRVAAKVSYKEESGSDEDGSGSDFELSSGEGQHSSDEEHKPSPRKQKRTPVPQRTKARSKSASKHQPPGFPVASSSSSGSKRGKKVSSGGEETGDRKAAGVNQWLEVFCEPQAKWVCVDCVHGVVAQPLTCYKYATKPMTYVVGIDSDGWVRDVTQRYDPAWMTATRKCRVDAEWWAETLRPYQSPLKEREKKEDQEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVLGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLSEPQLHDYNDLALYGHWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQMNLPNLHRVARKLGIDCVQAITGFDFHGGYCHPVTDGYIVCEEFKDVLQAAWENEQDIIEKKEKEKKEKRVLGNWKLLVRGLLIRERLQLRYGAKSEAVAPHANAGGGLSSDEEEGTSSQAEAARVLAASWPQNREAKEEQKPEYSKMTRKRRAAEASHLFPFEKL", "length": 926 }, "evidence": [ { "id": "F1SPI2", "url": "https://omabrowser.org/oma/group/F1SPI2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P51612-1", "protein_name": "DNA repair protein complementing XP-C cells homolog", "gene_name": "Xpc", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAPKRTADGRRRKRGQKTEDNKVARHEESVADDFEDEKQKPRRKSSFPKVSQGKRKRGCSDPGDPTNGAAKKKVAKATAKSKNLKVLKEEALSDGDDFRDSPADCKKAKKHPKSKVVDQGTDEDDSEDDWEEVEELTEPVLDMGENSATSPSDMPVKAVEIEIETPQQAKERERSEKIKMEFETYLRRMMKRFNKEVQENMHKVHLLCLLASGFYRNSICRQPDLLAIGLSIIPIRFTKVPLQDRDAYYLSNLVKWFIGTFTVNADLSASEQDDLQTTLERRIAIYSARDNEELVHIFLLILRALQLLTRLVLSLQPIPLKSAVTKGRKSSKETSVEGPGGSSELSSNSPESHNKPTTSRRIKEEETLSEGRGKATARGKRGTGTAGSRQRRKPSCSEGEEAEQKVQGRPHARKRRVAAKVSYKEESESDGAGSGSDFEPSSGEGQHSSDEDCEPGPRKQKRASAPQRTKAGSKSASKTQRGSQCEPSSFPEASSSSSGCKRGKKVSSGAEEMADRKPAGVDQWLEVYCEPQAKWVCVDCVHGVVGQPVACYKYATKPMTYVVGIDSDGWVRDVTQRYDPAWMTATRKCRVDAEWWAETLRPYRSLLTEREKKEDQEFQAKHLDQPLPTSISTYKNHPLYALKRHLLKFQAIYPETAAVLGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGFSNRARKARLSEPQLHDHNDLGLYGHWQTEEYQPPIAVDGKVPRNEFGNVYLFLPSMMPVGCVQMTLPNLNRVARKLGIDCVQAITGFDFHGGYCHPVTDGYIVCEEFRDVLLAAWENEQAIIEKKEKEKKEKRALGNWKLLVRGLLIRERLKLRYGAKSEAAAPHAAGGGLSSDEEEGTSSQAEAARVLAASWPQNREDPEQKSEYTKMTRKRRAAEASHLFPFEKL", "length": 930 }, "evidence": [ { "id": "F1SPI2", "url": "https://omabrowser.org/oma/group/F1SPI2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q01831-1", "protein_name": "DNA repair protein complementing XP-C cells", "gene_name": "XPC", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARKRAAGGEPRGRELRSQKSKAKSKARREEEEEDAFEDEKPPKKSLLSKVSQGKRKRGCSHPGGSADGPAKKKVAKVTVKSENLKVIKDEALSDGDDLRDFPSDLKKAHHLKRGATMNEDSNEEEEESENDWEEVEELSEPVLGDVRESTAFSRSLLPVKPVEIEIETPEQAKTRERSEKIKLEFETYLRRAMKRFNKGVHEDTHKVHLLCLLANGFYRNNICSQPDLHAIGLSIIPARFTRVLPRDVDTYYLSNLVKWFIGTFTVNAELSASEQDNLQTTLERRFAIYSARDDEELVHIFLLILRALQLLTRLVLSLQPIPLKSATAKGKKPSKERLTADPGGSSETSSQVLENHTKPKTSKGTKQEETFAKGTCRPSAKGKRNKGGRKKRSKPSSSEEDEGPGDKQEKATQRRPHGRERRVASRVSYKEESGSDEAGSGSDFELSSGEASDPSDEDSEPGPPKQRKAPAPQRTKAGSKSASRTHRGSHRKDPSLPAASSSSSSSKRGKKMCSDGEKAEKRSIAGIDQWLEVFCEQEEKWVCVDCVHGVVGQPLTCYKYATKPMTYVVGIDSDGWVRDVTQRYDPVWMTVTRKCRVDAEWWAETLRPYQSPFMDREKKEDLEFQAKHMDQPLPTAIGLYKNHPLYALKRHLLKYEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKKARVVRLGEVPYKMVKGFSNRARKARLAEPQLREENDLGLFGYWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLPNLHRVARKLDIDCVQAITGFDFHGGYSHPVTDGYIVCEEFKDVLLTAWENEQAVIERKEKEKKEKRALGNWKLLAKGLLIRERLKRRYGPKSEAAAPHTDAGGGLSSDEEEGTSSQAEAARILAASWPQNREDEEKQKLKGGPKKTKREKKAAASHLFPFEQL", "length": 940 }, "evidence": [ { "id": "F1SPI2", "url": "https://omabrowser.org/oma/group/F1SPI2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LVE4-1", "protein_name": "DNA repair protein complementing XP-C cells", "gene_name": "xpc", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAKRKDTRQKSDTKKPKQIANTKSGSKTQKAKENGMETKKNLKNSKVASRRSRKVKDVLDEVTSKYFQDSEVKTEEPEDLSDHSEERMIIEDTSLSKQVKEEEEDSEDEDDWEEVEEMAGPLGPVDSSELALESKPVEIEIETPDMIRKRQKKEKRKAEFETYLRRMMNRFNKDLLVDTHKVHLLCLMASGLFRNRLLCEPDLLAVALSLLPSHFTTVSLKRINNGFLEGLLKWFQATFTLNPALPEEKEVDLRTVLEKRMGCLSARNHEEMTYLFLLVLRSLRLFCRLVLSLQPLPLKPPPATKSKTTPSKSSSEKAQSEKSSPELKVSPGSKRPSSATAAAKEDRGGKRKKKTGGGGDKEAAGAQKPKNSRRRSVASKVSYKEVGSEEEEEQSEEEFQPSNEDDSEDSDGAVKICRKSKVKSRRSSKVKQEERSEEEEEEEEEEEEEKEVKKQRRKKKQGKGADEWLEVYLESSGRWVCVDVDQGVGQPQLCSDQATLPITYVVGLDDEGFMKDLGSRYDPTWLTSSRRRRVDSEWWEETMELYKSPDTERGQKEDQEMQAKLLDKPLPTSVSEYKNHPLYVLKRHLLKYEALYPATAAVLGYCRGEPVYSRDCVHTLHSRDTWLKEARTVRLGEEPYKMVLGFSNRSRKARMMSEQKNVKDLALFGTWQTEEYQPPIAVDGKVPRNEFGNVYMFKSCMLPIGCVHVHLPNLHRVARKLNIDCALAVTGFDYHCGFAHAVNDGYIVCEEHEEILKAAWENEQEIQQKKEQEKREKRAVTNWTLLVKGLLIKERLKRRYGQQGLASGTGLKQGKEGGAEGLSSDEEKEGGAQSAQAPPSLTASWPQNRKEEAEEKIVRRVSNREKRGEEKHLFPFEKV", "length": 879 }, "evidence": [ { "id": "F1SPI2", "url": "https://omabrowser.org/oma/group/F1SPI2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 8, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "XPC complex", "id": "GO:0071942", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071942", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "nucleotide-excision repair factor 2 complex", "id": "GO:0000111", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000111", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "site of DNA damage", "id": "GO:0090734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090734", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "regulation of mitotic cell cycle", "id": "GO:0007346", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007346", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "mismatch repair", "id": "GO:0006298", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006298", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "UV-damage excision repair", "id": "GO:0070914", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070914", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "regulation of cell cycle phase transition", "id": "GO:1901987", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901987", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "nucleotide-excision repair", "id": "GO:0006289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006289", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "regulation of mitotic cell cycle phase transition", "id": "GO:1901990", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901990", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "damaged DNA binding", "id": "GO:0003684", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003684", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "single-stranded DNA binding", "id": "GO:0003697", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003697", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "transcription coactivator activity", "id": "GO:0003713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003713", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "protein-containing complex binding", "id": "GO:0044877", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0044877", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "RNA polymerase II-specific DNA-binding transcription factor binding", "id": "GO:0061629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061629", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" }, { "name": "DNA damage sensor activity", "id": "GO:0140612", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0140612", "evidence": [ { "database": "UniProtKB", "id": "F1SPI2", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPI2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPI2" }, { "id": "SM01030", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01030" }, { "id": "SM01031", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01031" }, { "id": "SM01032", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM01032" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rad4 beta-hairpin", "eco_id": "ECO_0000259", "start_pos": 636, "end_pos": 688, "start_aa": "Leu", "end_aa": "His", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SPJ3-1", "uniprot_ac": "F1SPJ3", "uniprot_id": "F1SPJ3_PIG", "mass": { "chemical_mass": 78752.0, "monoisotopic_mass": 78752.0 }, "refseq": {}, "gene_names": [ { 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"url": "https://www.ensembl.org/id/ENSSSCG00000000366" } ] } } ], "crossref": [ { "id": "F1SPJ3", "url": "https://alphafold.ebi.ac.uk/entry/F1SPJ3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000366", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000366", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032843", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032843", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052317", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052317", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WLELPWF", "url": "https://omabrowser.org/oma/group/WLELPWF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR44665", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44665", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44665:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44665:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14901", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14901", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SPJ3", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPJ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQKHPGERGLCGAHHSGGASLRTLGPSVDPEILSFSGLRDSAGPAPNGARCLTEHSSPKYTQPPNPAHWSDPSHGPPRGPGPPRNGEDPDQSEASSEEESGVDQELSKENEAGYQEDGNPSFLSIPSACDCQGIPGIPEGPYSQGGDSSSSNFCHHCTTPALGEDEELEEEYDDEEPLKFPNDFSRVPSGKKPPPRRQRHRIPAKEDTREGGRRDPRPGRHRLGRKRSQADKRRGLGLWGAEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRQLKGSDLDLFRVWVGVWAGRLGTWAQLMFQFLSQGFSCGAGLFIRFLRLLGALLLWVLALLLGCLQLGWWFLVGLGDRLGWRGKAAWLFSWLASPTWQRCLILLKDSRPWQQLVRMVQRGWLELPWVKQRTDRQGNAPVASGRYCQPEEEVARLLTMAGVPEDELNPFHVLGVEATASDVELKKAYRQLAVMVHPDKNRHPRAEEAFKVLRAAWDIVSNPERRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKNARYCAECKRLHPAEEGDFWAESSMFGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRMPGTSGRQRATPDAPPADLQDFLSRIFQVPPGQMSNGNFFAGPQPGSGATAASKPNSTVPKGEAKPKRRKKVRRPFQR", "length": 703, "header": "tr|F1SPJ3-1|F1SPJ3_PIG Isoform 1 of DnaJ homolog subfamily C member 14 OS=Sus scrofa OX=9823 GN=DNAJC14 PE=4 SV=2 CANONICAL=F1SPJ3-1" }, "isoforms": [ { "isoform_ac": "F1SPJ3-1", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3/entry#F1SPJ3-1", "sequence": { "sequence": "MAQKHPGERGLCGAHHSGGASLRTLGPSVDPEILSFSGLRDSAGPAPNGARCLTEHSSPKYTQPPNPAHWSDPSHGPPRGPGPPRNGEDPDQSEASSEEESGVDQELSKENEAGYQEDGNPSFLSIPSACDCQGIPGIPEGPYSQGGDSSSSNFCHHCTTPALGEDEELEEEYDDEEPLKFPNDFSRVPSGKKPPPRRQRHRIPAKEDTREGGRRDPRPGRHRLGRKRSQADKRRGLGLWGAEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRQLKGSDLDLFRVWVGVWAGRLGTWAQLMFQFLSQGFSCGAGLFIRFLRLLGALLLWVLALLLGCLQLGWWFLVGLGDRLGWRGKAAWLFSWLASPTWQRCLILLKDSRPWQQLVRMVQRGWLELPWVKQRTDRQGNAPVASGRYCQPEEEVARLLTMAGVPEDELNPFHVLGVEATASDVELKKAYRQLAVMVHPDKNRHPRAEEAFKVLRAAWDIVSNPERRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKNARYCAECKRLHPAEEGDFWAESSMFGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRMPGTSGRQRATPDAPPADLQDFLSRIFQVPPGQMSNGNFFAGPQPGSGATAASKPNSTVPKGEAKPKRRKKVRRPFQR", "length": 703, "header": "tr|F1SPJ3-1|F1SPJ3_PIG Isoform 1 of DnaJ homolog subfamily C member 14 OS=Sus scrofa OX=9823 GN=DNAJC14 PE=4 SV=2 CANONICAL=F1SPJ3-1" }, "locus": { "chromosome": "5", "start_pos": 21272646, "end_pos": 21265668, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000389.5", "url": "https://www.ensembl.org/id/ENSSSCT00000000389.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000383.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000383.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPJ3", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "G3HRL2-1", "protein_name": "DnaJ homolog subfamily C member 14", "gene_name": "Dnajc14", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAQKHPGEGGLCGAHHTGGASLRTSGPSVDPEILSFSGLRDSTETAPNGTRCLTEPSGSKYTQPPNPAHWSDPSHGPPRGPGPPREGGYLDESETSSEGSGADQELSRENETGYQEDGSPSFLSIPSACNCQGSPGIPEGTYSEEGDGSSSNFCHHCTSPALGEDEELEEEYDDEEPLKFPSDFSRVSSGKKPPSRRQRHRFLTKEDTRDSGRRDPRSPGRHRLGRKRNQTDKRRGLGLWGVEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRQLKGSDLNLFRVWVGSWAGRLGGWAQVMVQCLSQSFSCAAGLFTRLLRLVGAFLLLALALLLGCLQLGWRFLVGLGDRLGWRDRTTRLFSWLASPAVHRCLTLLRDSRPWQQLVRLVQRNWLEFPWVKPRTNKQGNAPAASGRHCQPEEEVARLLTMAGVPEDELNPFHVLGVEATASDMELKKAYRQLAVMVHPDKNHHPRAEEAFKVLRAAWDIVSNPERRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKSARYCAECNRLHPAEEGDFWAESSMLGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRVPGTSGRQRATPETPPADLQDFLSRIFQVPPGQMSNGNFFAAPHPGPGATATSKPNSTVPKGEAKPKRRKKVRRPFQR", "length": 703 }, "evidence": [ { "id": "F1SPJ3", "url": "https://omabrowser.org/oma/group/F1SPJ3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5XIX0-1", "protein_name": "DnaJ homolog subfamily C member 14", "gene_name": "Dnajc14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQKHPGERGLCGVHHSGGSSLITSGSSVDPEILSFSGLRDSKETAPNGTRCLKEHSDPKCTQPPNPAHWSDPSHGPPRGPGPPREGGYPDESETCSEESGVDQELSRENETGYQEDGSPSFLPIPSACNCQGSPGVPEGTCSEEGDGSSSSFCHHCTSPALGEDEELEEEYDDEEPLKFPSDFSRVSSGKKPPSRRQRHRFLTKEDVRDSGRRDPKAPGRHRLARKRSQTDKRRGLGLWGVEELCQLGQAGFWWLIELLVLVGEYVETCGYLIYACRKLKGSDLDLFRIWVGVWARRLGGWARVMFQFLSQSFFSVAGLFIRLLRVVGAFLLLALALFLGCLQLGWRFLVGLGDRLGWRGKAAWLFSWLDSPALHHFLTLLKDSRPWQQLVRVIQWGWLELPWVKQRTQRQGTAHVASGRYCQPEEEVARLLTMAGVPEDELNPFHVLGVEATASDIELKKAYRQLAVMVHPDKNHHPRAEEAFKVLRAAWDIVSNPERRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKSARYCAECNRLHPAEEGDFWAESSMLGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRVPGTSGRQRATPESPPADLQDFLSRIFQVPPGPMSNGNFFAAPHPGPGTTSTSRPNSSVPKGEAKPKRRKKVRRPFQR", "length": 703 }, "evidence": [ { "id": "F1SPJ3", "url": "https://omabrowser.org/oma/group/F1SPJ3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6Y2X3-1", "protein_name": "DnaJ homolog subfamily C member 14", "gene_name": "DNAJC14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQKHPGERGLYGAHHSGGASLRTLGPSVDPEIPSFSGLRDSAGTAPNGTRCLTEHSGPKHTQHPNPAHWLDPSHGPPGGPGPPRDAEDPDQSETSSEEESGVDQELSKENETGNQKDGNSFLSIPSACNCQGTPGIPEGPYSEGGNGSSSNFCHHCTSPALGEDELEEEYDDEESLKFPSDFSRVSSGKKPPSRRQRHRFPTKEDTREGGRRDPRSPGRHRLGRKRSQADKRKGLGLWGAEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRQLKSSDLDLFRVWMGVWTGRLGGWAQVMFQFLSQGFYCGVGLFTRFLKLLGALLLLALALFLGFLQLGWRFLVGLGDRLGWRDKATWLFSWLDSPALQRCLTLLRDSRPWQRLVRIVQWGWLELPWVKQNINRQGNAPVASGRYCQPEEEVARLLTMAGVPEDELNPFHVLGVEATASDVELKKAYRQLAVMVHPDKNHHPRAEEAFKVLRAAWDIVSNAEKRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKSARYCAECNRLHPAEEGDFWAESSMLGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRIPGTRGRQRATPDAPPADLQDFLSRIFQVPPGQMPNGNFFAAPQPAPGAAAASKPNSTVPKGEAKPKRRKKVRRPFQR", "length": 702 }, "evidence": [ { "id": "F1SPJ3", "url": "https://omabrowser.org/oma/group/F1SPJ3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q921R4-1", "protein_name": "DnaJ homolog subfamily C member 14", "gene_name": "Dnajc14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAQKHPGERRLCGAHRSGGTSLSTSGSSVDPEILSFSGLRDSAETAPNGTRCLKEHSGPKYTQPPNPAHWSDPSHGPPRGPGPPRGGGYPDESETGSEESGVDQELSRENETGYQEDGSPSFLSIPSACNCQGSPGVPEGTYSEEGDGSSSSLCHHCTSPALGEDEELEEEYDDEEPLKFPSDFSRVSSGKKPLSRRQKHRFLIKEDVRDSGRREPKAPGRHRLARKRSQTDKRRGLGLWGVEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRKLKGSDLDLFRVWVGVWARRLGGWARMMFQFLSQSFFCVVGLLIRILRVVGAFLLLALALFLGCLQLGWRFSVGLGNRLGWRDKTAWLFSWLGSPALHHCLTLLKDSRPWQQLVRLIQWGWQELPWVKQRTKKQGNAPVASGRYCQPEEEVTRLLTMAGVPEDELNPFHVLGVEATASDTELKKAYRQLAVMVHPDKNHHPRAEEAFKILRAAWDIVSNPERRKEYEMKRMAENELSRSVNEFLSKLQDDLKEAMNTMMCSRCQGKHRRFEMDREPKSARYCAECNRLHPAEEGDFWAESSMLGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRVPGTSGRQRATPESPPADLQDFLSRIFQVPPGPMSNGNFFAAPHPGPGTTSTSRPNSSVPKGEAKPKRRKKVRRPFQR", "length": 703 }, "evidence": [ { "id": "F1SPJ3", "url": "https://omabrowser.org/oma/group/F1SPJ3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q95J56-1", "protein_name": "DnaJ homolog subfamily C member 14", "gene_name": "DNAJC14", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAQKHPGEGGLCGAHHSGGASLRTLGPSVDPDILSFSGLRDSAGSAPNGTRCLTEHSSPKYTQPPNPAHWSDPSHGPPRGPGPPLAEEDPDQSEASSEESGVDQELSRENETGYQDDGNSSFLSIPSTCNCQGTPGIPEGPYSEGRDSSSSNFCHHCTSPALGEDEELEGEYDEEEPLKFPSDVSRVPSEKKPAPRRQRHRVPAKEDTREGGRRDPRSPGRHRLGRKRSQADKRRGLGLWGAEELCQLGQAGFWWLIELLVLVGEYVETCGHLIYACRQLKGSDLDLLRVWVGVWAGRLRGWAQVMFQFLSQGFCYGAGLFTRFLRLVGALLLLALALLLGCLQLGWRFLVGLSDRLGWRDKATWIFSWLASPTWQRCLILLRESRPWQQLVRIVQWGWLELPWVKQRTNRQANAPVAGGRYCQPEEEVARLLTMAGVPEDELNPFHVLGVEATASDVELKKAYRQLAVMVHPDKNHHPRAEEAFKVLRAAWDIVSNPERRKEYEMKRMAENELSRSVNEFLSKLQEAMNTMMCSRCQGKHRRFEMDREPKSARYCAECNRLHPAEEGDFWAESSMLGLKITYFALMDGKVYDITEWAGCQRVGISPDTHRVPYHISFGSRMPGTSGRQRATPDAPPADLQDFLSRIFQVPPGQMSNGNFFAAPQPGPGATAASKPNSTVPKGEAKPKRRKKVRRPFQR", "length": 699 }, "evidence": [ { "id": "F1SPJ3", "url": "https://omabrowser.org/oma/group/F1SPJ3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "dopamine receptor binding", "id": "GO:0050780", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050780", "evidence": [ { "database": "UniProtKB", "id": "F1SPJ3", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F1SPJ3", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SPJ3", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 681, "end_pos": 683, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SPJ3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 703, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SPJ3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SPJ3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPJ3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPJ3" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 444, "end_pos": 508, "start_aa": "Asn", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 681, "end_pos": 683 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SPK5-1", "uniprot_ac": "F1SPK5", "uniprot_id": "F1SPK5_PIG", "mass": { "chemical_mass": 67048.0, "monoisotopic_mass": 67048.0 }, "refseq": {}, "gene_names": [ { "name": "EFCAB12", "type": "recommended", "evidence": [ { "id": "F1SPK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPK5" } ] } ], "protein_names": [ { "name": "EF-hand calcium binding domain 12", "type": "synonym", "evidence": [ { "id": "F1SPK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPK5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPK5", "url": "https://www.uniprot.org/uniprotkb/F1SPK5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EFCAB12", "url": "https://www.uniprot.org/uniprotkb/F1SPK5", "locus": { "chromosome": "13", "start_pos": 68794498, "end_pos": 68813987, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011587", "url": "https://www.ensembl.org/id/ENSSSCG00000011587" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011587", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011587", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042847", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042847", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "RVIAHCF", "url": "https://omabrowser.org/oma/group/RVIAHCF/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR47225", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47225", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47225:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47225:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "F1SPK5", "url": "https://www.uniprot.org/uniprotkb/F1SPK5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPK5-1", "url": "https://www.uniprot.org/uniprotkb/F1SPK5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDDSSEEYEALFRSLLAFYQSKSLFDDENTSKDRVFNPELVIAHCFKQFKQEDFHLPRSRRRIFILPPKEDAMPANPTPQTQAPPQPSPSLEALKIGDVQEQPEDSVWLSQRLKLRQDLESFGNIEKWLQNKPRLTPSEAKVLHWIHKEHDDWLMAQQATTARATKKKTLRPSRLLVPQLRLPRPPALSALYAYLHSQKIKILEIFNKVDRGENQRISREEFIMALKAVGAPLKSRDVEDIVIYLSSLGKHNSITTDSLTSTYKQWSLAQQKSTLATAAEYYRPAKQSASPQSPSKKQRENSTPQPPKMDLLTVPVVDMGTEARPMTLEEMEDVGKRYRERKRQSKLEVPSIQYTERCRLVRSGNEHFDEHCLPSTIHGEMGEIINRSRTDTFLVYLQCWKLCEAYGLPLTEDILMRALLYPGDKIIFQKDQVRPIRQPGGYYSDLRTFSPNLALLRFQGTSQPTDKKPDNRKMPTKNKKIHFKEFEEFTRKLKEKRPSGPQRTHPNFFWPGHLLDKLQLYLPTMTVDRSLALFSCVRRTPQAYSVTYHPNHWWPIKAMNYMTCAYYDAPEIYHIN", "length": 576, "header": "tr|F1SPK5-1|F1SPK5_PIG Isoform 1 of EF-hand calcium binding domain 12 OS=Sus scrofa OX=9823 GN=EFCAB12 PE=4 SV=3 CANONICAL=F1SPK5-1" }, "isoforms": [ { "isoform_ac": "F1SPK5-1", "url": "https://www.uniprot.org/uniprotkb/F1SPK5/entry#F1SPK5-1", "sequence": { "sequence": "MDDSSEEYEALFRSLLAFYQSKSLFDDENTSKDRVFNPELVIAHCFKQFKQEDFHLPRSRRRIFILPPKEDAMPANPTPQTQAPPQPSPSLEALKIGDVQEQPEDSVWLSQRLKLRQDLESFGNIEKWLQNKPRLTPSEAKVLHWIHKEHDDWLMAQQATTARATKKKTLRPSRLLVPQLRLPRPPALSALYAYLHSQKIKILEIFNKVDRGENQRISREEFIMALKAVGAPLKSRDVEDIVIYLSSLGKHNSITTDSLTSTYKQWSLAQQKSTLATAAEYYRPAKQSASPQSPSKKQRENSTPQPPKMDLLTVPVVDMGTEARPMTLEEMEDVGKRYRERKRQSKLEVPSIQYTERCRLVRSGNEHFDEHCLPSTIHGEMGEIINRSRTDTFLVYLQCWKLCEAYGLPLTEDILMRALLYPGDKIIFQKDQVRPIRQPGGYYSDLRTFSPNLALLRFQGTSQPTDKKPDNRKMPTKNKKIHFKEFEEFTRKLKEKRPSGPQRTHPNFFWPGHLLDKLQLYLPTMTVDRSLALFSCVRRTPQAYSVTYHPNHWWPIKAMNYMTCAYYDAPEIYHIN", "length": 576, "header": "tr|F1SPK5-1|F1SPK5_PIG Isoform 1 of EF-hand calcium binding domain 12 OS=Sus scrofa OX=9823 GN=EFCAB12 PE=4 SV=3 CANONICAL=F1SPK5-1" }, "locus": { "chromosome": "13", "start_pos": 68813811, "end_pos": 68794722, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012683.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012683.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012350.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012350.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPK5", "url": "https://www.uniprot.org/uniprotkb/F1SPK5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1ADU3-1", "protein_name": "EF-hand calcium binding domain 12", "gene_name": "EFCAB12", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVGLLELIANIERWSKTDGCSTVTFPTLEQLSINDVTTIWNNMFQRVHQLLLLKKPPAVSITGLGTFCIQKWQALEDGKTLTFQRPLFSLSEAVAQIRDFRHPSIHLPDDTEMVVLNCETIRLHTPYSQQTVQGCLLETLQYFYHILTNGEDADFTLKDIGTLAIRGEHMEMTFCEDFLLRLNKSTYVVQKLFNKRWVVLDKETAHLPSHFGHVHLLPKFEIKEVPQLATKPLPKEKLLERKGSLLCKLLRLRRTISLSTLTTVEINDEEEPAGRPLPQTPDTEGRQEEESPSFPVVTCHPEDDPHNLSAWIQERKQFISQLESFGDVEKWLSNKSSKSHLEERVWERIKSRRAARRAEGKSAMTDNLGDTTSASSQPQKDVAPPCIPYPQALVTLHDLLRRRKTTLVNVFKKAGMEGRNIKKADFIKIIKQTNVPIGEKDLDDVIIFLAAPNRGKYITMEKLMECQNEWLEMKKKESKETKAGAQTQPPKAACKTATSPPSAGGRAKGMDPTKPQVKLTPLEDTPVQAEPGQGHQTDHEKKDTPEPSGDRTQKTIKRQEIKKDKGSPIKWKEMSQLGRSGEVTVEEHCFPSTTGSDTGVLIDQYRRKVAASYLNSSKLCKEHDIHLTEPVLQKGLLHPGDKIIRGRRLRKIRQPGGYYNIGLADMSSPLSMSGSSKSAAGNLGKEGKNKRTSEESGHYDSRQRNRKEMEGSDNKFWPGHLLDKMRLCIPEEKINRAHPLFSCVHPTRPAYHII", "length": 754 }, "evidence": [ { "id": "F1SPK5", "url": "https://omabrowser.org/oma/group/F1SPK5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1M1Q8-1", "protein_name": "EF-hand calcium binding domain 12", "gene_name": "Efcab12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPILKKRPREETVSCLSPNKFLAKSCNLRGGGHKQTRRPGDQKTHALGKAPPHPSDAPKWNAGTPGHPSSAPSQNSAETLAKYSWKQKKASRLWEFQKAEEKKKSRVTFSLSVTDLGAHQSFTSIDDDFDDAASKAPVFKPELVTAHCFRRLKQKDFRLPQSRRRIIIVSGTKDQVPAQPTTPPQAPLPLTPSFKVPDTGDTQELPVNMKLWLSQRAKLRKQLETFGDVKTWLDNKPTITSSEFKVLCMIRREQTAPKRTLISVGKPKGKPLKYIRQPIPQLRLPKPPVLSDMYAFLRSRKIKIQEVFSKADRGENHRISREEFLMAVKAIGVPLKTQELEDIIIYLGSLGKQNAITTEALASTYKQWSLVHQQSTIPTAREYHNLSTRRTALKYPPNRQQAISSLQPPNMDLLKVPEVDTKMEGRPMSDEDMEDVGRRYRERRRQYKLSLPSIQYLENCRLVRSGTKQFDDHCLPTTISGEIEELLNMTRRDNFLVYLQCWELCEAYGLPLTEDILMRALLYPGDRIISLKEEVRPIRQPGGYYIDDRIVHSLAGFKNLHKHGEKETDKKTSKKMKEMHFLDFEEFTGKLKSKRLRGPSRTHPNHFWPGHLLDKLRLYLPTVARDRSLAIFSCIEHKPPAYSAVYNSKDWWPMKDLNYMTYAYYDAKKVYFIN", "length": 675 }, "evidence": [ { "id": "F1SPK5", "url": "https://omabrowser.org/oma/group/F1SPK5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6NXP0-1", "protein_name": "EF-hand calcium-binding domain-containing protein 12", "gene_name": "EFCAB12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDDDYEAYHSLFLSLLGLCPSKTPINENAPVFDPEPVIAHCFKQFQQKDFRLPQTRRRIIMVPRKEDQTPLNPASQPQAPPKPIPSFKVLEARDIQEQPEDRKTWLSQRSKLRQELESFGDVKRWLENKPSITPSEAKVLHMIHEEQSAQPNASQATTRTTRKKAPRLSRLSRQMVPQLQLPEPPALSVMYSYLHSRKIKILEIFHKVGQGENQRITREEFIAAVKAVGVPLKNQEVEDIVIYLSSLGKHNTITMDILANTYKQWSMAQQRSSLATAREHYILAKHRDSLKGPLKKQEVDSAPQLPKVDLLTVPAVDTQMETRPMTLEEMEEVGKRYRERQRQHKLTIPSIQYTEQCHLVRCGNRHFDEHCLPSTIHGDMRELIDSARRHNFLVYLQCWKLCKSYGLPLTEDILMKALLYPGDKIIFQMDKVCPIRQPGGYYSDWKVFSPNLALLRSQGPGKSKRTDKKTPKKSKKMRFKEFEEFTRKLKVKRSSGLQQTHPNSFWPGHLLDKLQLYLPTVATDRSLALFSCVQHQPHVYPATYHPDHWWPLRNKNYMTHAHYDAAKVYYIN", "length": 572 }, "evidence": [ { "id": "F1SPK5", "url": "https://omabrowser.org/oma/group/F1SPK5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "V9GXH0-1", "protein_name": "EF-hand calcium binding domain 12", "gene_name": "Efcab12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRSILKKRPGEETVSCLPPNKCLAKVCNLRGGGYKQTRRVGCQKTHALRKPPPHPSNASQWDAGLSSHLSKAHSQNVAETLAKHSGKQKKSSRLWEAQKAEERKSRVTFGLTITDAGSHHSFTSIEDDLDETTSKVPVFKPELVTAHCFRQLKQKDFRLPKSRRRIIIVPGTKDQVPARPTVPPEAPLPLMPSFRVLDTSDTQELPVDKKVWLNQRAKLRRQLETFGDVKTWLDNKPNITSSEFRVLSMIRQEQKTPKHTLISIRRAKDRALRHVRLIAPQLRLPKPPVLSDMYAYLRSRKIKILEIFSKGERGENQRISREEFLMALKAVGVPLKNQELEDIIIYLGSLGKQNTITTEALASTYKQWSLAQQKSTIPSAKEYYKLSAKRTPLKHSPKEQQATSSSQPRKMDLLKVPEVDTKMEGRPMSEEDMEDVGRRYRERRRQYKLSLPSIQYMENCRLVRSGTKEFDNHCLPTTISGEMEELLNVTRRDNFLVYLQCWELCEAYGLPLTEEILMRALLYPGDKIITLKEEVRPIRQPGGYYIDQRIVYSLAARRSPRRHGGKKRDKKTSKKMKKMHFDDFEELTGKLKLQRLSPSDTHPNHFWPGHLLDKLRLYLPTVAKDQSLAIFSCVEHKPPAYPAIYHSKNYWPMKDFSYMTHAYYDANKVYSIN", "length": 673 }, "evidence": [ { "id": "F1SPK5", "url": "https://omabrowser.org/oma/group/F1SPK5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1SPK5", "url": "https://www.uniprot.org/uniprotkb/F1SPK5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 29, "end_pos": 31, "annotation": "n_glycosylation_sequon" }, { "start_pos": 301, "end_pos": 303, "annotation": "n_glycosylation_sequon" }, { "start_pos": 386, "end_pos": 388, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPK5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPK5" }, { "id": "PS50222", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50222" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EF-hand", "eco_id": "ECO_0000259", "start_pos": 197, "end_pos": 232, "start_aa": "Ser", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 29, "end_pos": 31 }, { "start_pos": 301, "end_pos": 303 }, { "start_pos": 386, "end_pos": 388 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SPP2-1", "uniprot_ac": "F1SPP2", "uniprot_id": "F1SPP2_PIG", "mass": { "chemical_mass": 17058.0, "monoisotopic_mass": 17058.0 }, "refseq": {}, "gene_names": [ { "name": "LSMEM2", "type": "recommended", "evidence": [ { "id": "F1SPP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPP2" } ] } ], "protein_names": [ { "name": "Leucine rich single-pass membrane protein 2", "type": "synonym", "evidence": [ { "id": "F1SPP2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPP2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPP2", "url": "https://www.uniprot.org/uniprotkb/F1SPP2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LSMEM2", "url": "https://www.uniprot.org/uniprotkb/F1SPP2", "locus": { "chromosome": "13", "start_pos": 32757034, "end_pos": 32753199, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011401", "url": "https://www.ensembl.org/id/ENSSSCG00000011401" } ] } } ], "crossref": [ { "id": "F1SPP2", "url": "https://alphafold.ebi.ac.uk/entry/F1SPP2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011401", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011401", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR031674", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031674", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "AHTLHTQ", "url": "https://omabrowser.org/oma/group/AHTLHTQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR37333", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37333", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37333:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37333:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15833", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15833", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SPP2", "url": "https://www.uniprot.org/uniprotkb/F1SPP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPP2-1", "url": "https://www.uniprot.org/uniprotkb/F1SPP2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "EKRGGESPAETPCTTPADTAAPTTRNRAPVAPNHVQEVRLYRVESISDLHSGGPLCPYLAEEAQPWDELLGILPPSLCAQTGCSPVHSRGGFLLLLALLVLTCLALAVLAVYLSVLQSESLRALVHTLRAQEEVLLKLRLASLSQLRRLNFSETRAPS", "length": 158, "header": "tr|F1SPP2-1|F1SPP2_PIG Isoform 1 of Leucine rich single-pass membrane protein 2 OS=Sus scrofa OX=9823 GN=LSMEM2 PE=1 SV=2 CANONICAL=F1SPP2-1" }, "isoforms": [ { "isoform_ac": "F1SPP2-1", "url": "https://www.uniprot.org/uniprotkb/F1SPP2/entry#F1SPP2-1", "sequence": { "sequence": "EKRGGESPAETPCTTPADTAAPTTRNRAPVAPNHVQEVRLYRVESISDLHSGGPLCPYLAEEAQPWDELLGILPPSLCAQTGCSPVHSRGGFLLLLALLVLTCLALAVLAVYLSVLQSESLRALVHTLRAQEEVLLKLRLASLSQLRRLNFSETRAPS", "length": 158, "header": "tr|F1SPP2-1|F1SPP2_PIG Isoform 1 of Leucine rich single-pass membrane protein 2 OS=Sus scrofa OX=9823 GN=LSMEM2 PE=1 SV=2 CANONICAL=F1SPP2-1" }, "locus": { "chromosome": "13", "start_pos": 32756167, "end_pos": 32755489, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012480.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012480.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012155.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012155.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPP2", "url": "https://www.uniprot.org/uniprotkb/F1SPP2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2KAD9-1", "protein_name": "Leucine-rich single-pass membrane protein 2", "gene_name": "Lsmem2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLLSAKQQDSNLPGREAEPLSRKAEQRPGGIRRQGKAGEMPKCGHWEPVKRPCARSPGPKLRVIPETVGNLEPNATDTVLPMQNQRHRPTLAPNHVQEVHLHRVESISDLHSGGSLRPCLAEEAQAWEELLGVLPPSLCTQAACSPMCGRGGFLLLLALLVFTCLALAIVAVYLSVLQSESLRVLAHTLRTQEETLLKLRLASLSQLRRLNSSEARAPS", "length": 219 }, "evidence": [ { "id": "F1SPP2", "url": "https://omabrowser.org/oma/group/F1SPP2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A571BE98-1", "protein_name": "Leucine-rich single-pass membrane protein 2", "gene_name": "Lsmem2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPEETLEDTVLPMQNQRNRGALAPNHVQEVRLHRVESISDLHSGGSLRPCLVEEAQAWEELLGVLPPSLCTQAGCSPVCGRGGFLLLLVLLVFTCLALATVAVYLSVLQSESLRVLAHTLRTQEETLLKLRLASLSQLRRLNSSEARAPS", "length": 150 }, "evidence": [ { "id": "F1SPP2", "url": "https://omabrowser.org/oma/group/F1SPP2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N112-1", "protein_name": "Leucine-rich single-pass membrane protein 2", "gene_name": "LSMEM2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPSLAPDCPLLAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGAGTLRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLLALLVLTCLVLALLAVYLSVLQSESLRILAHTLRTQEETLLKLRLASLSQLRRLNSSEAQAPS", "length": 164 }, "evidence": [ { "id": "F1SPP2", "url": "https://omabrowser.org/oma/group/F1SPP2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 150, "end_pos": 152, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SPP2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 158, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SPP2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SPP2" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 150, "end_pos": 152 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", 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"Protein Classification" ] }, { "id": "IPR034125", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034125", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR13948", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13948", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13948:SF22", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13948:SF22", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01585", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01585", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17780", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17780", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A5G7", "url": "https://www.uniprot.org/uniprotkb/A0A287A5G7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A5G7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A5G7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ART6", "url": "https://www.uniprot.org/uniprotkb/A0A287ART6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ART6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ART6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPQ9", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPQ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWGDSRSANRTGPFRGSQEERFAPGWNRDYPPPPLKSHVQERHSGNFPGRDSLPFDFQGHSGPPFANVEEHSFSYGARDGLHGDYRGGEGPGHDFRGGDFSSSDFQSRDSTQLDFRGRDIHSGDFRDREGPPMDYRGEDGTSVDYRGRETSHMNYRDRDAHTVDFRGRDAPPPDFRGRGTYDLDFRGRDGSHADFRGRDLSDLDFRARDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTSDLDFRERDTPHSDFRGRHRSRTDQDFRGREMGPCLEFKDREMPSVDPNILDYIQPSTQDREHSGMSVNKREESTHDHTTERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNSQSSLQDQDKSQLSGGEQQSSDASLFKEEGGLDFLGRQDTDYRSMEYRDVDHRLPGSQIFGYGQSKSFPEGKTSQDAQRDLQDQDYRTGQSEEKPSKLIRLSGVPENATKEEILNAFRTPDGMPVKDLQLKEFNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSLDFWYCKRCKASTGGHRSCSFCKCPREVTEAKQELITYPQPQKTSIPAPSEKQPSQPPRSADKEPEPRKREEGQEPRLGHQKREAERYLPSRREGINFRRDREKEPWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNRQGQQQEVYVPQDPESPEEEEIKEKKPTSQGKSSSKKETFKRDGKEKKDRGVTRFQENSSEGTAPPEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQREEVIKKENEEEKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKERGNDRREKLQSFDSPERKRIKYSRETDSDRKPVGKEGIDNSSKGGCVQQATGWRKGTGLGYGHLGLASAEETEGRIRGPSVGAPGRTSKRQSNETYRDAVRRVMFARYKELD", 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binding motif protein 6 OS=Sus scrofa OX=9823 GN=RBM6 PE=4 SV=2 CANONICAL=F1SPQ9-1" }, "locus": { "chromosome": "13", "start_pos": 32569695, "end_pos": 32472361, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036734.3", "url": "https://www.ensembl.org/id/ENSSSCT00000036734.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039047.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039047.2" } ] } }, { "isoform_ac": "A0A287ART6-1", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9/entry#A0A287ART6-1", "sequence": { "sequence": "MIHDKEVTLEYVPSLDFWYCKRCKASTGGHRSCSFCKCPREVTEAKQELITYPQPQKTSIPAPSEKQPSQPPRSADKEPEPRKREEGQEPRLGHQKREAERYLPSRREGINFRRDREKEPWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNRQGQQQEVYVPQDPESPEEEEIKEKKPTSQGKSSSKKETFKRDGKEKKDRGVTRFQENSSEGTAPPEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQREEVIKKENEEEKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKERGNDRREKLQSFDSPERKRIKYSRETDSDRKPVGKEGIDNSSKGGCVQQATGWRKGTGLGYGHLGLASAEETEGRIRGPSVGAPGRTSKRQSNETYRDAVRRVMFARYKELD", "length": 569, "header": "tr|A0A287ART6-1|A0A287ART6_PIG Computationally mapped isoform of RNA binding motif protein 6 OS=Sus scrofa OX=9823 GN=RBM6 PE=4 SV=3 CANONICAL=F1SPQ9-1" }, "locus": { "chromosome": "13", "start_pos": 32569696, "end_pos": 32541415, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057165.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057165.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046622.3", "url": "https://www.ensembl.org/id/ENSSSCP00000046622.3" } ] } }, { "isoform_ac": "F1SPQ9-1", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9/entry#F1SPQ9-1", "sequence": { "sequence": "MWGDSRSANRTGPFRGSQEERFAPGWNRDYPPPPLKSHVQERHSGNFPGRDSLPFDFQGHSGPPFANVEEHSFSYGARDGLHGDYRGGEGPGHDFRGGDFSSSDFQSRDSTQLDFRGRDIHSGDFRDREGPPMDYRGEDGTSVDYRGRETSHMNYRDRDAHTVDFRGRDAPPPDFRGRGTYDLDFRGRDGSHADFRGRDLSDLDFRARDQSRSDFRNRDVSDLDFRDKDGTQVDFRGRGSGTSDLDFRERDTPHSDFRGRHRSRTDQDFRGREMGPCLEFKDREMPSVDPNILDYIQPSTQDREHSGMSVNKREESTHDHTTERPAFGIQKGEFEHSETREGETQGVAFEHESPADFQNSQSSLQDQDKSQLSGGEQQSSDASLFKEEGGLDFLGRQDTDYRSMEYRDVDHRLPGSQIFGYGQSKSFPEGKTSQDAQRDLQDQDYRTGQSEEKPSKLIRLSGVPENATKEEILNAFRTPDGMPVKDLQLKEFNTGYDYGYVCVEFSLLEDAIGCMEANQGTLMIHDKEVTLEYVPSLDFWYCKRCKASTGGHRSCSFCKCPREVTEAKQELITYPQPQKTSIPAPSEKQPSQPPRSADKEPEPRKREEGQEPRLGHQKREAERYLPSRREGINFRRDREKEPWSGETRQDGESKTIMLKRIYRSTPPEVIVEVLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRNSDWSSDTNRQGQQQEVYVPQDPESPEEEEIKEKKPTSQGKSSSKKETFKRDGKEKKDRGVTRFQENSSEGTAPPEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQPQREEVIKKENEEEKLTDWNKLACLLCRRQFPNKEVLIKHQQLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKERGNDRREKLQSFDSPERKRIKYSRETDSDRKPVGKEGIDNSSKGGCVQQATGWRKGTGLGYGHLGLASAEETEGRIRGPSVGAPGRTSKRQSNETYRDAVRRVMFARYKELD", "length": 1091, "header": "tr|F1SPQ9-1|F1SPQ9_PIG Isoform 1 of RNA binding motif protein 6 OS=Sus scrofa OX=9823 GN=RBM6 PE=4 SV=3 CANONICAL=F1SPQ9-1" }, "locus": { "chromosome": "13", "start_pos": 32569696, "end_pos": 32466990, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012472.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012472.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012147.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012147.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPQ9", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F1SPQ9", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SPQ9", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "F1SPQ9", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1019, "end_pos": 1021, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1072, "end_pos": 1074, "annotation": "n_glycosylation_sequon" }, { "start_pos": 466, "end_pos": 468, "annotation": "n_glycosylation_sequon" }, { "start_pos": 690, "end_pos": 692, "annotation": "n_glycosylation_sequon" }, { "start_pos": 742, "end_pos": 744, "annotation": "n_glycosylation_sequon" }, { "start_pos": 835, "end_pos": 837, "annotation": "n_glycosylation_sequon" }, { "start_pos": 9, "end_pos": 11, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SPQ9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1091, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SPQ9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SPQ9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPQ9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPQ9" }, { "id": "PS50174", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50174" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "G-patch", "eco_id": "ECO_0000259", "start_pos": 1019, "end_pos": 1065, "start_aa": "Asn", "end_aa": "Arg", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SPQ9", "database": "UniProtKB", "url": 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"database": "UniProtKB", "id": "ARBA00094471", "url": "https://www.uniprot.org/uniprotkb/ARBA00094471#function" }, { "database": "UniProtKB", "id": "A0A287A8Z6", "url": "https://www.uniprot.org/uniprotkb/A0A287A8Z6#function" }, { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ABTB3", "url": "https://www.uniprot.org/uniprotkb/F1SPR7", "locus": { "chromosome": "5", "start_pos": 12754539, "end_pos": 13069527, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000162", "url": "https://www.ensembl.org/id/ENSSSCG00000000162" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000162", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000162", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18351", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18351", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd18527", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18527", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22913", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22913", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009072", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009072", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047824", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047824", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052089", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052089", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR059008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR059008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NLHREPQ", "url": "https://omabrowser.org/oma/group/NLHREPQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPR7", "url": "https://www.orthodb.org/?gene=F1SPR7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46071", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46071", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46071:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46071:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF26281", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF26281", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A8Z6", "url": "https://www.uniprot.org/uniprotkb/A0A287A8Z6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A8Z6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A8Z6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5X6", "url": "https://www.uniprot.org/uniprotkb/A0A287B5X6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5X6-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5X6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPR7-1", "url": "https://www.uniprot.org/uniprotkb/F1SPR7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELEALLLRSRDPRAGPVAPGGLPKDALAKLSTLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYARVVASGLPRSCSGPGPGSSSGPGPGSGPGAAPAADKERETPGGGAASGGACSAASSASGGSSCCAPPAAAASAASAAPPVAASANHHHHHHHALHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLCLPDSLNLHRDPQRTSKPGELAMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLRADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELITQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYNHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 1108, "header": "tr|F1SPR7-1|F1SPR7_PIG Isoform 1 of Ankyrin repeat- and BTB/POZ domain-containing protein 3 OS=Sus scrofa OX=9823 GN=ABTB3 PE=1 SV=2 CANONICAL=F1SPR7-1" }, "isoforms": [ { "isoform_ac": "A0A287A8Z6-1", "url": "https://www.uniprot.org/uniprotkb/F1SPR7/entry#A0A287A8Z6-1", "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELEALLLRSRDPRAGPVAPGGLPKDALAKLSTLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYARVVASGLPRSCSGPGPGSSSGPGPGSGPGAAPAADKERETPGGGAASGGACSAASSASGGSSCCAPPAAAASAASAAPPVAASANHHHHHHHALHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLCLPDSLNLHRDPQRTSKPGELAMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLRADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVELLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELITQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYNHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 1074, "header": "tr|A0A287A8Z6-1|A0A287A8Z6_PIG Computationally mapped isoform of Ankyrin repeat- and BTB/POZ domain-containing protein 3 OS=Sus scrofa OX=9823 GN=ABTB3 PE=1 SV=1 CANONICAL=F1SPR7-1" }, "locus": { "chromosome": "5", "start_pos": 13068937, "end_pos": 12756530, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000051430.2", "url": "https://www.ensembl.org/id/ENSSSCT00000051430.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040264.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040264.1" } ] } }, { "isoform_ac": "A0A287B5X6-1", "url": "https://www.uniprot.org/uniprotkb/F1SPR7/entry#A0A287B5X6-1", "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELEALLLRSRDPRAGPVAPGGLPKDALAKLSTLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYARVVASGLPRSCSGPGPGSSSGPGPGSGPGAAPAADKERETPGGGAASGGACSAASSASGGSSCCAPPAAAASAASAAPPVAASANHHHHHHHALHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLCLPDSLNLHRDPQRTSKPGELAMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLRADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELITQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYNHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 989, "header": "tr|A0A287B5X6-1|A0A287B5X6_PIG Computationally mapped isoform of Ankyrin repeat- and BTB/POZ domain-containing protein 3 OS=Sus scrofa OX=9823 GN=ABTB3 PE=1 SV=1 CANONICAL=F1SPR7-1" }, "locus": { "chromosome": "5", "start_pos": 13068937, "end_pos": 12756530, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064620.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064620.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051481.1", "url": "https://www.ensembl.org/id/ENSSSCP00000051481.1" } ] } }, { "isoform_ac": "F1SPR7-1", "url": "https://www.uniprot.org/uniprotkb/F1SPR7/entry#F1SPR7-1", "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELEALLLRSRDPRAGPVAPGGLPKDALAKLSTLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYARVVASGLPRSCSGPGPGSSSGPGPGSGPGAAPAADKERETPGGGAASGGACSAASSASGGSSCCAPPAAAASAASAAPPVAASANHHHHHHHALHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLCLPDSLNLHRDPQRTSKPGELAMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLRADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELITQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYNHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 1108, "header": "tr|F1SPR7-1|F1SPR7_PIG Isoform 1 of Ankyrin repeat- and BTB/POZ domain-containing protein 3 OS=Sus scrofa OX=9823 GN=ABTB3 PE=1 SV=2 CANONICAL=F1SPR7-1" }, "locus": { "chromosome": "5", "start_pos": 13068937, "end_pos": 12756530, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000171.3", "url": "https://www.ensembl.org/id/ENSSSCT00000000171.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000169.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000169.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A6QL63-1", "protein_name": "Ankyrin repeat- and BTB/POZ domain-containing protein 3", "gene_name": "ABTB3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELEALLLRSRDPRAGPAVPGGLPKDALAKLSTLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYSRVVASGVPRSCSGPGSGSGSGPGPSSGPGAAPAADKEREAPGGGAASGGACSAASSASGGSSCCAPPAAAAAAVPPAAAANHHHHHHHALHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLCLPDSLNLHRDPQRSNKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLRADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDGTCIEIGYVKYSIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYNHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 1104 }, "evidence": [ { "id": "F1SPR7", "url": "https://omabrowser.org/oma/group/F1SPR7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D4AC89-1", "protein_name": "Ankyrin repeat- and BTB/POZ domain-containing protein 3", "gene_name": "Abtb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAAPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEVQSAMEIVLSWGLAARCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYTRVLASGLPRSCSGPGPGSSSSSGPGPGSGPGAPTADKERETPGGGAASGGPCSAASSASGGSSCCAPPATAATAVPPATATAAAPTAANHHHHHHHHTLHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNVKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSSPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCVEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSVNTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 1113 }, "evidence": [ { "id": "F1SPR7", "url": "https://omabrowser.org/oma/group/F1SPR7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BJI4-1", "protein_name": "Ankyrin repeat- and BTB/POZ domain-containing protein 3", "gene_name": "ABTB3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLTDSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELEALLLRSRDPRAGPVAPGGLPKDALAKLSTLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYARVVASGLPRSCSGLGPGSSSGPGQGSGPGAAPAADKEREVPGGGAASGGACSAASSASGGSSCCAPPTVAAAAAAAAAPPAAAANHHHHHHHALHEAPKFTVETLEYTVNNDSEIWGLLQPYQHLICGKNASGVLCLPDSLNLHRDPQRTSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPLHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLRADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDSTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYNHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGTGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 1108 }, "evidence": [ { "id": "F1SPR7", "url": "https://omabrowser.org/oma/group/F1SPR7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q1LVW0-1", "protein_name": "Ankyrin repeat- and BTB/POZ domain-containing protein 3-A", "gene_name": "abtb3a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAGKGKTAARTLEDLTLDSGYGGAADSFRSSSVSLCCSDTHLSYAHGGNCWHLTESMHSRHNSLDTVNTVLAEDTEILECSGQCAKLPELEEDVPWSLGEVEGALRKDEELCVGNASREILAKLSALVSRALVRIAREAQRMSLRYARCTKHEIQSAIKMVLSWTISVNCITAALSALSLYNMSTGDKFSRGKSTRCGLIFSVGKFFRWMVDSRVALRIHEHAAIYLSACMESLFREVFTRVQRSALVEKENGVPKFSVESLEQAINNDSELWGLLQPYQHLICGKNASGVLSLPDSLNLHRDQQRAGKTGEGHAYSQAELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLHIKNPSNGTPVHQNRTGSVHWEPEALYTLCYFMHCPQMEWENPNVEPSKITLHTERPFLVLPPLMEWIRVAVAHTEHRRSFSVDSDDVRQAARLLLPGVDCEPRQLKADDCFCATRKLDAASTEAKFLQDLGFRMLNCGRTDLVKQAVNLLGPDGINSMSEQGMTPLMYSCVRGDEAMVQMLLDAGADINSEVPSSLHKHPSVYPDTRQGTPLTFAVLHGHVPVVQLLLDARANVEGAIQESTENYTETPLQLASAAGNFELVSLLLERGADPLIGTTYRNGISSGPLGEMNSYSLAAAHGHRNVFRKLLSQVEKDKGDVLSLEEMLAEGSEAVERRAPQNEGTLRTGKAKLRALREAMYHSAEHGHVDITIDIRSLGVPWTLHTWLESLRTCFVQQRRPLIQGLLKDFSCIKEDEYTEELITHGLPLMFQILRASKNEVISQQLSVIFTQCYGPFPIPKLTEIKKKQTSRLDPHFLNNKEMSDVTFLVEGKPFYAHKVLLFTASPRFKSLLSNRPAAENTCIEISHVKYNIFQLVMQYLYCGGTESLHIRNTEIMELLSAAKFFQLDALQRHCEIICSKNITNDSCVDIYKHARFLGALELAGFIEGFFLKNMVLLIELENFKQLLYEVPADSPGPGPSYDVLHDLEQTLALRIRSIHLSTSKGSIV", "length": 1021 }, "evidence": [ { "id": "F1SPR7", "url": "https://omabrowser.org/oma/group/F1SPR7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6GQW0-1", "protein_name": "Ankyrin repeat- and BTB/POZ domain-containing protein 3", "gene_name": "Abtb3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMHSRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAVPGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTAAALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTACMESLFRDIYSRVLASGLPRSCSGPGPGSSSGSGPGPGSGPGAPAADKERETPGGGAASGGPCSAASSASGGSSCCAPPATAATAVPPTTATAAVAANHHHHHHTLHEAPKFTVETLEHTVNNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQSLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPMHHKQGALYWEPEALYTLCYFMHCPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARLLLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPDGINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALTFAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPLIGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLAETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQQHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGPYPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSKPTNDNTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCEIICAKSINTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGAGQDVLQDLQRTLAIRIQSIHLSSSKGSVV", "length": 1109 }, "evidence": [ { "id": "F1SPR7", "url": "https://omabrowser.org/oma/group/F1SPR7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "glutamatergic synapse", "id": "GO:0098978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098978", "evidence": [ { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein heterodimerization activity", "id": "GO:0046982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046982", "evidence": [ { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" } ], "pmid": "" }, { "name": "PDZ domain binding", "id": "GO:0030165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030165", "evidence": [ { "database": "UniProtKB", "id": "F1SPR7", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 190, "end_pos": 192, "annotation": "n_glycosylation_sequon" }, { "start_pos": 33, "end_pos": 35, "annotation": "n_glycosylation_sequon" }, { "start_pos": 361, "end_pos": 363, "annotation": "n_glycosylation_sequon" }, { "start_pos": 380, "end_pos": 382, "annotation": "n_glycosylation_sequon" }, { "start_pos": 453, "end_pos": 455, "annotation": "n_glycosylation_sequon" }, { "start_pos": 690, "end_pos": 692, "annotation": "n_glycosylation_sequon" }, { "start_pos": 962, "end_pos": 964, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPR7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPR7" }, { "id": "PS50097", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50097" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BTB", "eco_id": "ECO_0000259", "start_pos": 927, "end_pos": 987, "start_aa": "Ser", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 190, "end_pos": 192 }, { "start_pos": 33, "end_pos": 35 }, { "start_pos": 361, "end_pos": 363 }, { "start_pos": 380, "end_pos": 382 }, { "start_pos": 453, "end_pos": 455 }, { "start_pos": 690, "end_pos": 692 }, { "start_pos": 962, "end_pos": 964 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SPS0-1", "uniprot_ac": "F1SPS0", "uniprot_id": "F1SPS0_PIG", "mass": { "chemical_mass": 19357.0, "monoisotopic_mass": 19357.0 }, "refseq": {}, "gene_names": [ { "name": "ASCL4", "type": "recommended", "evidence": [ { "id": "F1SPS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ] } ], "protein_names": [ { "name": "Achaete-scute family bHLH transcription factor 4", "type": "synonym", "evidence": [ { "id": "F1SPS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPS0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ASCL4", "url": "https://www.uniprot.org/uniprotkb/F1SPS0", "locus": { "chromosome": "5", "start_pos": 12623691, "end_pos": 12624209, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000159", "url": "https://www.ensembl.org/id/ENSSSCG00000000159" } ] } } ], "crossref": [ { "id": "F1SPS0", "url": "https://alphafold.ebi.ac.uk/entry/F1SPS0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000159", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000159", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR011598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036638", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036638", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050283", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050283", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "YIPFPGY", "url": "https://omabrowser.org/oma/group/YIPFPGY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR23349", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23349", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23349:SF108", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23349:SF108", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00010", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00010", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SPS0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKRKPAGLLTLPYHLRPVPVGVPGSLLRLPLRDPFRVSWSLDAVRWERTHGGCAPRRPYLPLPLDGAFEPAFLRKRNERERQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAICYIKHLQELLERHARGQEGAADAAPPRRAECNSDGESKASSAPSPSSEPEEGAS", "length": 172, "header": "tr|F1SPS0-1|F1SPS0_PIG Isoform 1 of Achaete-scute family bHLH transcription factor 4 OS=Sus scrofa OX=9823 GN=ASCL4 PE=4 SV=3 CANONICAL=F1SPS0-1" }, "isoforms": [ { "isoform_ac": "F1SPS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SPS0/entry#F1SPS0-1", "sequence": { "sequence": "MEKRKPAGLLTLPYHLRPVPVGVPGSLLRLPLRDPFRVSWSLDAVRWERTHGGCAPRRPYLPLPLDGAFEPAFLRKRNERERQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAICYIKHLQELLERHARGQEGAADAAPPRRAECNSDGESKASSAPSPSSEPEEGAS", "length": 172, "header": "tr|F1SPS0-1|F1SPS0_PIG Isoform 1 of Achaete-scute family bHLH transcription factor 4 OS=Sus scrofa OX=9823 GN=ASCL4 PE=4 SV=3 CANONICAL=F1SPS0-1" }, "locus": { "chromosome": "5", "start_pos": 12624209, "end_pos": 12623694, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000168.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000168.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000166.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000166.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YSP7-1", "protein_name": "Achaete-scute family bHLH transcription factor 4", "gene_name": "ASCL4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASNNDDDGLLNRIAFAGAMPLANSHIRPHGVPLREPFGVPIHLDPSYWERAYGGHAGRISYVPFPGYVGVYDYSFEPAFIRKRNERERQRVRCVNEGYTRLREHLPKEFADKRLSKVETLRAAINYIKHLQSLLDCHPLGSSNKETLTTKELPDAPSPGPLRECNSDGESKASSASSPYSEFEEVGS", "length": 188 }, "evidence": [ { "id": "F1SPS0", "url": "https://omabrowser.org/oma/group/F1SPS0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3MY92-1", "protein_name": "Achaete-scute family bHLH transcription factor 4", "gene_name": "ASCL4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEKRPQDGLLTLPHHLSQVPLGVPRSLPRLLMRDSFRVSVSWEPALGGGGAPRRPYLPLRLDGAFEPAFLRKRNERERQRVRCVNEGYARLRDHLPREVADRRLSKVETLRAAIGYIKQLQEVLERHAPGQEGAAGAGSSRRAECNSDGESKASSAPSPSSEPEDGAS", "length": 168 }, "evidence": [ { "id": "F1SPS0", "url": "https://omabrowser.org/oma/group/F1SPS0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "M0QW46-1", "protein_name": "Achaete-scute family bHLH transcription factor 4", "gene_name": "Ascl4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRRSAGLLALPSALRTAPLGALPGREPCRVSVRQDAADCARRRPYSSLPLGGVAEPAFLRQRNERERQRVRCVNEGYARLRQHLPRELAGQRLSKVETLRAAISYIKQLQELLERHRPDCNSDGESKASSGASPCSESEERS", "length": 144 }, "evidence": [ { "id": "F1SPS0", "url": "https://omabrowser.org/oma/group/F1SPS0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6XD76-1", "protein_name": "Achaete-scute homolog 4", "gene_name": "ASCL4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METRKPAERLALPYSLRTAPLGVPGTLPGLPRRDPLRVALRLDAACWEWARSGCARGWQYLPVPLDSAFEPAFLRKRNERERQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELLERQAWGLEGAAGAVPQRRAECNSDGESKASSAPSPSSEPEEGGS", "length": 172 }, "evidence": [ { "id": "F1SPS0", "url": "https://omabrowser.org/oma/group/F1SPS0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "epithelium development", "id": "GO:0060429", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060429", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" }, { "name": "animal organ development", "id": "GO:0048513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048513", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "protein dimerization activity", "id": "GO:0046983", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046983", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "RNA polymerase II transcription regulator complex", "id": "GO:0090575", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090575", "evidence": [ { "database": "UniProtKB", "id": "F1SPS0", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SPS0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 172, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SPS0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SPS0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPS0" }, { "id": "PS50888", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50888" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "BHLH", "eco_id": "ECO_0000259", "start_pos": 72, "end_pos": 124, "start_aa": "Ala", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 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"uniprot_canonical_ac": "F1SPT4-1", "uniprot_ac": "F1SPT4", "uniprot_id": "F1SPT4_PIG", "mass": { "chemical_mass": 50157.0, "monoisotopic_mass": 50157.0 }, "refseq": { "ac": "XP_003132253", "name": "coiled-coil domain-containing protein 71", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132253" }, "gene_names": [ { "name": "CCDC71", "type": "recommended", "evidence": [ { "id": "F1SPT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPT4" } ] }, { "name": "CCDC71", "type": "synonym", "evidence": [ { "id": "XP_003132253", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132253" } ] } ], "protein_names": [ { "name": "Coiled-coil domain containing 71", "type": "synonym", "evidence": [ { "id": "F1SPT4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPT4/entry#names_and_taxonomy" } ] }, { "name": "coiled-coil domain-containing protein 71", "type": "synonym", "evidence": [ { "id": "XP_003132253", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132253" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPT4", "url": "https://www.uniprot.org/uniprotkb/F1SPT4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCDC71", "url": "https://www.uniprot.org/uniprotkb/F1SPT4", "locus": { "chromosome": "13", "start_pos": 31767495, "end_pos": 31771218, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011378", "url": "https://www.ensembl.org/id/ENSSSCG00000011378" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011378", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011378", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100526185", "url": "https://www.ncbi.nlm.nih.gov/gene/100526185", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026695", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026695", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100526185", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100526185", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CPETVGQ", "url": "https://omabrowser.org/oma/group/CPETVGQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPT4", "url": "https://www.orthodb.org/?gene=F1SPT4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14484", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14484", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14484:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14484:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15374", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15374", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003132253", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132253", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SPT4", "url": "https://www.uniprot.org/uniprotkb/F1SPT4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPT4-1", "url": "https://www.uniprot.org/uniprotkb/F1SPT4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSVVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQARAPMPAATSPPASAPRTPMQLSAGQATLLPMPLSGRLAKASTPPLTKHATTNLLLNSLKQSSASHAQGAAVGFPTHLYPGVYPAMRLSVVLEALVPLKTPIPCLSAKHKAQSVQLSLADSPLKLRRGPGKSPGNSQPKVPRKATSKGPKGLTQRGSRAGPRQGNGPQNKTYKATGSLSSPRMKGGCSLGTKIAQAKAARAQAKVARTQAKVAKARAKAKAAQIKAKAKAARARAKAKAKAVQAKAKAKAARARARAKSKAVRANAKAVQAKAKVARIQPRGRGRPKRSVQARTARKGQKRCPETVGQKRKRADEEKDLPPRKRTRLGPQSPKMWLGRGTAKLLRFQAIKVDRRSSDDEVRQQAQQILHVNLSPIIQLQPLLP", "length": 470, "header": "tr|F1SPT4-1|F1SPT4_PIG Isoform 1 of Coiled-coil domain containing 71 OS=Sus scrofa OX=9823 GN=CCDC71 PE=4 SV=1 CANONICAL=F1SPT4-1" }, "isoforms": [ { "isoform_ac": "F1SPT4-1", "url": "https://www.uniprot.org/uniprotkb/F1SPT4/entry#F1SPT4-1", "sequence": { "sequence": "MSVVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQARAPMPAATSPPASAPRTPMQLSAGQATLLPMPLSGRLAKASTPPLTKHATTNLLLNSLKQSSASHAQGAAVGFPTHLYPGVYPAMRLSVVLEALVPLKTPIPCLSAKHKAQSVQLSLADSPLKLRRGPGKSPGNSQPKVPRKATSKGPKGLTQRGSRAGPRQGNGPQNKTYKATGSLSSPRMKGGCSLGTKIAQAKAARAQAKVARTQAKVAKARAKAKAAQIKAKAKAARARAKAKAKAVQAKAKAKAARARARAKSKAVRANAKAVQAKAKVARIQPRGRGRPKRSVQARTARKGQKRCPETVGQKRKRADEEKDLPPRKRTRLGPQSPKMWLGRGTAKLLRFQAIKVDRRSSDDEVRQQAQQILHVNLSPIIQLQPLLP", "length": 470, "header": "tr|F1SPT4-1|F1SPT4_PIG Isoform 1 of Coiled-coil domain containing 71 OS=Sus scrofa OX=9823 GN=CCDC71 PE=4 SV=1 CANONICAL=F1SPT4-1" }, "locus": { "chromosome": "13", "start_pos": 31769163, "end_pos": 31767754, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012456.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012456.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012131.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012131.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPT4", "url": "https://www.uniprot.org/uniprotkb/F1SPT4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100526185", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100526185", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZSV6-1", "protein_name": "Coiled-coil domain containing 71", "gene_name": "CCDC71", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MNIAVNNVEEKAVHSWSRIYSAGQKVLEEALRVFNPMSKDLSDTETQLVAFIQGLKEEGFQPTILRSKDVYGYSSCTADTPSQAKGSTPHSCAAATTSTPPKTPARSTVAMARASASPTSISVNSSKVSSPPVSKGDSTNLLLNSFKQTRSGKSKASVVGFPASMYPDVYPAVRLSVVLEALVPLKTPTSCLDSKYRRGPLGVSSSDLKLLKVSSQTRQFSSGKTTKIREGKRCKRVGKKAPHSATLALNLLKGLKAGVLQESNACKASGVLNGRIAGSSSQGCTTAAQSKALKIKAKEAPVGKMEWKDSSTYQETVGKKRKRVAEVRDAPQRKKSKSIPVQNKSRRARSTLNLLKFWAIKVGNSSSDDEVRRRAQKILRVNLSPVIRIQPLSHSHSVP", "length": 399 }, "evidence": [ { "id": "F1SPT4", "url": "https://omabrowser.org/oma/group/F1SPT4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q2HJ91-1", "protein_name": "Coiled-coil domain-containing protein 71", "gene_name": "CCDC71", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSVVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQARAPTPAATSPPASAPQTAVRLPAGRATLLPMPLSGRLAKASTPGLAKHATTNLLLSSLKQSSAGRAQGAAVGFPTHLYPGVYPAMRLSVVLEALVPIKTPVACLGAKPKAQSLQLSLGDSPLKVRKGPGKRLGNAQLKAPRKATSKGSKCLAQRGPRSGPRQGAGLQSKTCKVTGSLGGPRVKDGGALGTKAAQAKAACAQAKVAQTQATATQARAKAKAVRARAKAKAARIKAREVRARAKAKAVQAKAKVARTQPRGRGRPKGSIQGRTARRSRKSRPETVGQKRKRTEEAKDLSPRKRTRLGPRSPKVQLGPGTARLLKFRAIKVDRLASDDEVRQQAQRILRVNLSPVIRLQPLPPHSAP", "length": 452 }, "evidence": [ { "id": "F1SPT4", "url": "https://omabrowser.org/oma/group/F1SPT4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q4V7C4-1", "protein_name": "Coiled-coil domain-containing protein 71", "gene_name": "Ccdc71", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTASPPSQTKLQARTINPPATSLPARAPQTAKSVPTGQTTLLPVPLSGRLAKGSTPALAKHTTTNLLLSSLKQSNASNTSGTTVGFPAHLYPGVYPAMQLSVVLEALVPLKTPCLDVKHRAQSLQLSLAKSSLKLRKGSGNPQSKAPRRITSKGLKYLTSKGPGAGLRRGAGTQSNGARMKGRSTLGTKTVRGKAPRTLTKAVCARASVAPAKTKTVRVRAKVKQAKPKAAKAKAKAAALRGKAKDKAVQAKAKAARTKHKKRPKGYVQTRTGRTSLKNSSETVGQKRKKAEETKGLPPKKRARCVPRSKARLGTGTAKPQKSQTIKVDRKCSDDEVRQCAQQILRVNLSPVVLLQPLLPV", "length": 436 }, "evidence": [ { "id": "F1SPT4", "url": "https://omabrowser.org/oma/group/F1SPT4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8IV32-1", "protein_name": "Coiled-coil domain-containing protein 71", "gene_name": "CCDC71", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSVVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTANPPSQTKLQARAPNPTATSPPASAPRTAMRLPAGRATLLPMPLSGRLAKASTPALAKHATTNLLLSSLKQSSASHARGAAVGFPTHLYPGVYPAMRLSVVLEALVPLKTPMPCLGAKHKAQSLQLSLADSPLKLRKSSGKGPGNPRPKAPRKTTSKGPKCLTRKGPGAGPRRGSGHQSKTNRATGSPSVRRMKGGSALGTKTAQAKVARTLAKAARAQAKVARTQAKAAKARAKAKAAQVKAKAKAKAAQVKAKAKVMAAWAKAKAKAKAVRAKAKVARTQPRGRGRPKGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRSPKAWLGPGTAKLLKFRAIKVDRRSSDDEVRQRAQRILRVNLSPVIRLQPLLPYSAV", "length": 467 }, "evidence": [ { "id": "F1SPT4", "url": "https://omabrowser.org/oma/group/F1SPT4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8VEG0-1", "protein_name": "Coiled-coil domain-containing protein 71", "gene_name": "Ccdc71", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMVVQPVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSATEAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTASPPSQTKLQARTINPPATSLPKTAVSVPAGRTTLLPVPLSGRLAKGSTAALAKHATTNLLLSSLKQSSASNSSGTTVGFPAHLYPGVYPAMRLSVVLEALVPLKTPCLDVKHGAQSLQLSLAKSPLKVRKASGNPKSKAPRKITSKGLKHLTSKGPGAGLRRGAGTQSNGAQRKGCSALGPKTVQAQASQTLIKAARAHASVAQTQTKTVRVRAKAKQAKPKAARAKAKAAVVRDKAKDKVIQAKAKAAQTKHKGKPKGSVQTRTGRANRKNSSETVGRKRKKAEETKGLPPKKRARCVPRPPKVWLGPGTAKPRKSQTIKVDRKCSDDEVRQCAQQILRVNLSPVVWLQPLLPF", "length": 433 }, "evidence": [ { "id": "F1SPT4", "url": "https://omabrowser.org/oma/group/F1SPT4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 256, "end_pos": 258, "annotation": "n_glycosylation_sequon" }, { "start_pos": 458, "end_pos": 460, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], 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"https://www.ncbi.nlm.nih.gov/gene/100156110", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR027869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156110", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156110", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MFHDSSP", "url": "https://omabrowser.org/oma/group/MFHDSSP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SPV1", "url": "https://www.orthodb.org/?gene=F1SPV1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14889", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14889", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14889:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14889:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15133", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15133", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-9860276", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9860276", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SPV1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPV1-1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLSEGYLSGLAYQNDIYWNCTSCNEQVVEEKEETEATAATALYYSPVDKTQVRNLYVSCKSSDKFISSVHSRESHPSRNPMITVLQANPNPVFESPNLATVELYRDPSRETYLVPPSCKSICKNYNDLHIAGGQVMALNSVTTDFASEGSFEHGPLLKSSEIPLTMEDSISTQPSDLPPKPIQRYSSYWRITSVKEKSSLQMQKPISNAVLNEYLEQKVVELYKQYIMDNMFHDSSPTQILASELIMTSVDQISIQVSREKNLETSKARDIVINRLLQLVSTEISTPSLHISQYSNVNP", "length": 299, "header": "tr|F1SPV1-1|F1SPV1_PIG Isoform 1 of TLR adaptor interacting with endolysosomal SLC15A4 OS=Sus scrofa OX=9823 GN=TASL PE=4 SV=1 CANONICAL=F1SPV1-1" }, "isoforms": [ { "isoform_ac": "F1SPV1-1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1/entry#F1SPV1-1", "sequence": { "sequence": "MLSEGYLSGLAYQNDIYWNCTSCNEQVVEEKEETEATAATALYYSPVDKTQVRNLYVSCKSSDKFISSVHSRESHPSRNPMITVLQANPNPVFESPNLATVELYRDPSRETYLVPPSCKSICKNYNDLHIAGGQVMALNSVTTDFASEGSFEHGPLLKSSEIPLTMEDSISTQPSDLPPKPIQRYSSYWRITSVKEKSSLQMQKPISNAVLNEYLEQKVVELYKQYIMDNMFHDSSPTQILASELIMTSVDQISIQVSREKNLETSKARDIVINRLLQLVSTEISTPSLHISQYSNVNP", "length": 299, "header": "tr|F1SPV1-1|F1SPV1_PIG Isoform 1 of TLR adaptor interacting with endolysosomal SLC15A4 OS=Sus scrofa OX=9823 GN=TASL PE=4 SV=1 CANONICAL=F1SPV1-1" }, "locus": { "chromosome": "X", "start_pos": 26370333, "end_pos": 26369437, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013346.6", "url": "https://www.ensembl.org/id/ENSSSCT00000013346.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012988.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012988.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPV1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156110", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156110", "resource": "KEGG Pathway" }, { "id": "R-SSC-9860276", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9860276", "resource": "Reactome", "description": "SLC15A4:TASL-dependent IRF5 activation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1L1RS25-1", "protein_name": "TLR adaptor interacting with endolysosomal SLC15A4", "gene_name": "CXorf21", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLSEGYLYRIAYLCEDSELCTNQAVEEVVYEMRSINCSSRDEAQVKSLLQRCRSAGKCISAVHSRGSKHSRRQKDNLQQSVQNPLPEGQTSPTMDVCEGLVRKDTYLVPSSCKSICKNYNDLHIAGDCVVPISSVATDFTCDSGIGPFLESSEIPPPMESVRVPPSETGRKQAQGFSSCWRVASLVPHQQPLSDSALNDYLEQKLMELYKQYIMDSTVNRASPTQILASELIMTNVDQISTQISRERKMETTKAKDIVISRFLQIASEQIFSEISTPSLHISQYSNTNA", "length": 289 }, "evidence": [ { "id": "F1SPV1", "url": "https://omabrowser.org/oma/group/F1SPV1/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9SG28-1", "protein_name": "TLR adaptor interacting with endolysosomal SLC15A4", "gene_name": "TASL", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLSEGYLSGLAYRNDIQWSYPSSNEQVAEEKEEEMEATAAASLSYSSVDETQVQNLYVSCKSSGKVISSVYSRESQHSRNPRITVLQTNPNPVYESPNLAAVELYRDTSRETYLVPPSCKSICKNYNDLQIAGGQVMAINSATTDFPSEGSFQYGPLLKSSEIPLSMEDSMFTQPSDLPPTPIQRYSSYWRITSIKEKNSLQMQKPISNAVLNEYLEQKLVELYKQYFMDTGFHDSSPTQILASELIMTNVDQISIQVSIEKNLEISKARDIVINRLLQYGSTEISTPSLHISQYSNVNP", "length": 300 }, "evidence": [ { "id": "F1SPV1", "url": "https://omabrowser.org/oma/group/F1SPV1/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZRK2-1", "protein_name": "TLR adaptor interacting with endolysosomal SLC15A4", "gene_name": "Tasl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSEGYLSGLTYWNDIHWNCASYNEPVAGDQGEETSSVAALSYSSVDETQVQSVYVSCKSSGKFISSVHARASQHSRSQSRTVLQANSNPVFESPTLAAVGICRDVIRETYLVPPSCKSICKNYNDLHIAGGQVMAINSVMADFPSESSFEDGPLLKSSEISLSMEDSISTQFTELPLKPIQRYSSYWRITSIKEKNSLQMQKPISNAVLNEYLEQKVVELYKQYIMDTVFHDSSPTQILASEFIMTNVDQISLQVSKEKNLDTSKVKDIVISHLLQLVSSEISTPSLHISQYSDITP", "length": 298 }, "evidence": [ { "id": "F1SPV1", "url": "https://omabrowser.org/oma/group/F1SPV1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9D3J9-1", "protein_name": "TLR adapter interacting with SLC15A4 on the lysosome", "gene_name": "Tasl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSEGYLSGLTYWNDIHWNCASYNEPVAGDQGKETSSVAALSYSSVDETQVQSLYVSCKSSGKFISSVHARASQHSRSQSRTVLQANSNPVFESPTLAAVGICRDVIRETYLVPPSCKSICKNYNDLHIAGGQVMAINSVMANFPSESSFEDGPLLKSSEISLSMEDSTSTQLTELPLKPIQRYSSYWRITSIKEKSSLQMQKPISNAVLNEYLEQKVVELYKQYIMDTVFHDSSPTQILASEFIMTNVDQISLQVSKEKNLDTSKVKDIVISHLLQLVSSEISTPSLHISQYSNITP", "length": 298 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"https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SPV1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SPV1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1" } ], "pmid": "" }, { "name": "endolysosome membrane", "id": "GO:0036020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036020", "evidence": [ { "database": "UniProtKB", "id": "F1SPV1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "regulation of toll-like receptor signaling pathway", "id": "GO:0034121", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034121", "evidence": [ { "database": "UniProtKB", "id": "F1SPV1", "url": "https://www.uniprot.org/uniprotkb/F1SPV1" } ], "pmid": "" }, { "name": "positive regulation of 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"MPRGQKNKLNTPEKRHQAPSGTPGLKGAQATATKKESFSSSPSPPCGILSQRKPGAKSHSTLKRPQRDLSTTTLSAGVSHTRSYKGANGKIGKEQSSSQAPLSIVQSQRDRLTKTTNILVEFLMHMYKRKKPVMKADMLKIINKKYKSRFIEILKRASFSMEVVFGIDLKEVDPTKHSYILVSKMSLPNNGTVSRGRGFPKTGLLMNLLGLIFMKGNCATEEKIWEFLNKMRVYAGKRHFIFGEPKKLITHDLVKLKYLEYRQVPNSNPARYEFLWGPRAHAETSKMRVLEFWAKINNTVPSAFQSWYEEALRDEAKRVQATVTARADANAMARGCSSVLSSSSSHTY", "length": 348, "header": "tr|F1SPV4-1|F1SPV4_PIG Isoform 1 of MAGE family member B3 OS=Sus scrofa OX=9823 GN=MAGEB3 PE=4 SV=3 CANONICAL=F1SPV4-1" }, "isoforms": [ { "isoform_ac": "F1SPV4-1", "url": "https://www.uniprot.org/uniprotkb/F1SPV4/entry#F1SPV4-1", "sequence": { "sequence": "MPRGQKNKLNTPEKRHQAPSGTPGLKGAQATATKKESFSSSPSPPCGILSQRKPGAKSHSTLKRPQRDLSTTTLSAGVSHTRSYKGANGKIGKEQSSSQAPLSIVQSQRDRLTKTTNILVEFLMHMYKRKKPVMKADMLKIINKKYKSRFIEILKRASFSMEVVFGIDLKEVDPTKHSYILVSKMSLPNNGTVSRGRGFPKTGLLMNLLGLIFMKGNCATEEKIWEFLNKMRVYAGKRHFIFGEPKKLITHDLVKLKYLEYRQVPNSNPARYEFLWGPRAHAETSKMRVLEFWAKINNTVPSAFQSWYEEALRDEAKRVQATVTARADANAMARGCSSVLSSSSSHTY", "length": 348, "header": "tr|F1SPV4-1|F1SPV4_PIG Isoform 1 of MAGE family member B3 OS=Sus scrofa OX=9823 GN=MAGEB3 PE=4 SV=3 CANONICAL=F1SPV4-1" }, "locus": { "chromosome": "X", "start_pos": 26054997, "end_pos": 26053954, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013343.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013343.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012985.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012985.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 22, "start_aa": "Thr", "end_pos": 22, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr22", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": 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"https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:102160138", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:102160138", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AWU5-1", "protein_name": "MAGE family member B3", "gene_name": "Mageb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRGQKRKLHAGKKCYQAGGETQDLQGAQALAEVEKSCPPPSSPHVGVTAHTKSASKLQTTSKVPQRALSTTESKGLSHTRPCKVAKYKIKRKQQSSQTSPSTEKCPRSSLTSTVRLVVNYMMNMCKMKRPILKADVMKMVTNTHKVHIAEILRRASFNLEVLLGVDLKEADSMDSYTLASKMNLPNNGVLTTGRGFPKTGLLMNLLGVIFLKGNCATEESIWEFLNKMKIYDGKKHFIFGEPRKLITQDLVKLKYLEYRQVPNRSPTSYEFLWGPRSHAETSKMKILKFLAKINHIVPSAFQSRYDEALKDEEERSQAAATFGDTTINTK", "length": 331 }, "evidence": [ { "id": "F1SPV4", "url": "https://omabrowser.org/oma/group/F1SPV4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "O15480-1", "protein_name": "Melanoma-associated antigen B3", 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domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F1SPV5-1" }, "locus": { "chromosome": "X", "start_pos": 26029599, "end_pos": 26028652, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013342.4", "url": "https://www.ensembl.org/id/ENSSSCT00000013342.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012984.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012984.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., 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], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"MAGEB10", "type": "recommended", "evidence": [ { "id": "F1SPV9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPV9" } ] }, { "name": "LOC110255254", "type": "synonym", "evidence": [ { "id": "XP_005673569", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673569" } ] } ], "protein_names": [ { "name": "MAGE family member B10", "type": "synonym", "evidence": [ { "id": "F1SPV9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPV9/entry#names_and_taxonomy" } ] }, { "name": "melanoma-associated antigen B10-like", "type": "synonym", "evidence": [ { "id": "XP_005673569", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673569" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPV9", "url": 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"database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13909", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13909", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020936590", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020936590", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZLI3", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLI3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZLI3-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZLI3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHG0", "url": "https://www.uniprot.org/uniprotkb/A0A287AHG0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AHG0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AHG0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPY3-1", "url": "https://www.uniprot.org/uniprotkb/F1SPY3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP", "length": 798, "header": "tr|F1SPY3-1|F1SPY3_PIG Isoform 1 of Zinc finger protein Y-linked OS=Sus scrofa OX=9823 GN=ZFY PE=3 SV=3 CANONICAL=F1SPY3-1" }, "isoforms": [ { "isoform_ac": "A0A286ZLI3-1", "url": "https://www.uniprot.org/uniprotkb/F1SPY3/entry#A0A286ZLI3-1", "sequence": { "sequence": "MDEDELELQPQETNTFFDEIVDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP", "length": 611, "header": "tr|A0A286ZLI3-1|A0A286ZLI3_PIG Computationally mapped isoform of Zinc finger protein Y-linked OS=Sus scrofa OX=9823 GN=ZFY PE=3 SV=2 CANONICAL=F1SPY3-1" }, "locus": { "chromosome": "Y", "start_pos": 9932822, "end_pos": 9910978, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046322.2", "url": "https://www.ensembl.org/id/ENSSSCT00000046322.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032325.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032325.2" } ] } }, { "isoform_ac": "A0A287AHG0-1", "url": "https://www.uniprot.org/uniprotkb/F1SPY3/entry#A0A287AHG0-1", "sequence": { "sequence": "MDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLSNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP", "length": 720, "header": "tr|A0A287AHG0-1|A0A287AHG0_PIG Computationally mapped isoform of Zinc finger protein Y-linked OS=Sus scrofa OX=9823 GN=ZFY PE=3 SV=1 CANONICAL=F1SPY3-1" }, "locus": { "chromosome": "Y", "start_pos": 9932822, "end_pos": 9916649, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045348.2", "url": "https://www.ensembl.org/id/ENSSSCT00000045348.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043420.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043420.2" } ] } }, { "isoform_ac": "F1SPY3-1", "url": "https://www.uniprot.org/uniprotkb/F1SPY3/entry#F1SPY3-1", "sequence": { "sequence": "MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP", "length": 798, "header": "tr|F1SPY3-1|F1SPY3_PIG Isoform 1 of Zinc finger protein Y-linked OS=Sus scrofa OX=9823 GN=ZFY PE=3 SV=3 CANONICAL=F1SPY3-1" }, "locus": { "chromosome": "Y", "start_pos": 9932822, "end_pos": 9910978, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013323.4", "url": "https://www.ensembl.org/id/ENSSSCT00000013323.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012966.3", "url": "https://www.ensembl.org/id/ENSSSCP00000012966.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F1SPY3", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 280, "end_pos": 282, "annotation": "n_glycosylation_sequon" }, { "start_pos": 296, "end_pos": 298, "annotation": "n_glycosylation_sequon" }, { "start_pos": 359, "end_pos": 361, "annotation": "n_glycosylation_sequon" }, { "start_pos": 368, "end_pos": 370, "annotation": "n_glycosylation_sequon" }, { "start_pos": 637, "end_pos": 639, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SPY3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 798, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SPY3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SPY3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPY3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPY3" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 418, "end_pos": 448, "start_aa": "Tyr", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 280, "end_pos": 282 }, { "start_pos": 296, "end_pos": 298 }, { "start_pos": 359, "end_pos": 361 }, { "start_pos": 368, "end_pos": 370 }, { "start_pos": 637, "end_pos": 639 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] } ] }, { "uniprot_canonical_ac": "F1SPZ2-1", "uniprot_ac": "F1SPZ2", "uniprot_id": "F1SPZ2_PIG", "mass": { "chemical_mass": 52491.0, "monoisotopic_mass": 52491.0 }, "refseq": { "ac": "XP_005655793", "name": "uncharacterized protein C12orf50 homolog isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655793" }, "gene_names": [ { "name": "C5H12orf50", "type": "recommended", "evidence": [ { "id": "F1SPZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" } ] }, { "name": "C12orf50", "type": "synonym", "evidence": [ { "id": "F1SPZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" } ] }, { "name": "C5H12orf50", "type": "synonym", "evidence": [ { "id": "XP_005655793", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655793" } ] } ], "protein_names": [ { "name": "Chromosome 5 C12orf50 homolog", "type": "synonym", "evidence": [ { "id": "F1SPZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C12orf50 homolog isoform X3", "type": "synonym", "evidence": [ { "id": "XP_005655793", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655793" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SPZ2", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C5H12orf50", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2", "locus": {} } ], "crossref": [ { "id": "F1SPZ2", "url": "https://alphafold.ebi.ac.uk/entry/F1SPZ2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000924", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000924", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100524088", "url": "https://www.ncbi.nlm.nih.gov/gene/100524088", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR040943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041686", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041686", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524088", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524088", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AIRDICY", "url": "https://omabrowser.org/oma/group/AIRDICY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZJL4", "url": "https://www.orthodb.org/?gene=A0A286ZJL4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SPZ2", "url": "https://www.orthodb.org/?gene=F1SPZ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15725", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15725", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15725:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15725:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15663", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15663", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17732", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17732", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005655793", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655793", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZJL4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJL4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZJL4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZJL4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPZ2", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SPZ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVFFPNQWIAGSQCRFRHCEEALGSDTVCSLWREGKCLDPLCRFRHMEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNITLQKETQEGISPPAQSQEPLKPQENISRPIHHPLVLKTNFEEEEEEGDEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHTPPDISSSKSIASTVEKELEKPLENGSELQEGDGLTVPTKFSLSERQGEMKASLDGKPRTDIAAFENGGGDCHVPQRIIFLGVDEKEVLTEGKEVTMSKCSNAKDNQDSPHPKSSLTTRLVPTTHVLNATENISMKCREDPSSMNDVQPVRKPHFKGVKKRKWIYDEPKSFPGPGMRRAVQAPNPKNKMSYHRNHRNRNSENAAYIHVQKDAVKTVSWNAPPRGRPTNGSYNRADINKEPKFNLCSDKYTSTSYNGSAWRKRIPFSKTYSKTEKIYTEPRRNGSK", "length": 461, "header": "tr|F1SPZ2-1|F1SPZ2_PIG Isoform 1 of Chromosome 5 C12orf50 homolog OS=Sus scrofa OX=9823 GN=C5H12orf50 PE=4 SV=4 CANONICAL=F1SPZ2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZJL4-1", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2/entry#A0A286ZJL4-1", "sequence": { "sequence": "MVFFPNQWIAGSQCRFRHCEEALGSDTVCSLWREGKCLDPLCRFRHMEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNITLQKETQEGISPPAQSQEPLKPQENISRPIHHPLVLKTNFEEEEEEGDEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHTPPDISSSKSIASTVEKELEKPLENGSELQEGDGLTVPTKFSLSERQGEMKASLDGKPRTDIAAFENGGGDCHVPQRIIFLGVDEKEVLTEGKEVTMSKCSNAKVNDVQPVRKPHFKGVKKRKWIYDEPKSFPGPGMRRAVQAPNPKNKMSYHRNHRNRNSENAAYIHVQKDAVKTVSWNAPPRGRPTNGSYNRADINKEPKFNLCSDKYTSTSYNGSAWRKRIPFSKTYSKTEKIYTEPRRNGSK", "length": 422, "header": "tr|A0A286ZJL4-1|A0A286ZJL4_PIG Computationally mapped isoform of Chromosome 5 C12orf50 homolog OS=Sus scrofa OX=9823 GN=C5H12orf50 PE=4 SV=1 CANONICAL=F1SPZ2-1" }, "locus": { "chromosome": "5", "start_pos": 94520112, "end_pos": 94492524, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054043.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054043.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031773.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031773.1" } ] } }, { "isoform_ac": "F1SPZ2-1", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2/entry#F1SPZ2-1", "sequence": { "sequence": "MVFFPNQWIAGSQCRFRHCEEALGSDTVCSLWREGKCLDPLCRFRHMEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNITLQKETQEGISPPAQSQEPLKPQENISRPIHHPLVLKTNFEEEEEEGDEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHTPPDISSSKSIASTVEKELEKPLENGSELQEGDGLTVPTKFSLSERQGEMKASLDGKPRTDIAAFENGGGDCHVPQRIIFLGVDEKEVLTEGKEVTMSKCSNAKDNQDSPHPKSSLTTRLVPTTHVLNATENISMKCREDPSSMNDVQPVRKPHFKGVKKRKWIYDEPKSFPGPGMRRAVQAPNPKNKMSYHRNHRNRNSENAAYIHVQKDAVKTVSWNAPPRGRPTNGSYNRADINKEPKFNLCSDKYTSTSYNGSAWRKRIPFSKTYSKTEKIYTEPRRNGSK", "length": 461, "header": "tr|F1SPZ2-1|F1SPZ2_PIG Isoform 1 of Chromosome 5 C12orf50 homolog OS=Sus scrofa OX=9823 GN=C5H12orf50 PE=4 SV=4 CANONICAL=F1SPZ2-1" }, "locus": { "chromosome": "5", "start_pos": 94520112, "end_pos": 94492524, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001009.5", "url": "https://www.ensembl.org/id/ENSSSCT00000001009.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000987.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000987.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SPZ2", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524088", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524088", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YAN0-1", "protein_name": "Chromosome 12 open reading frame 50", "gene_name": "C12orf50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAEGGNDRYFYSPYAQQNYSNILCFWETQPLGCVRISCVFHHSKPRNINGLFLPPSNNTVFQQEGQGGILNSAHSQESLRIQETFLRPIHPPVIVDLSQEEDDKEEDEEEDEDNKNNISDLLEKTAEDIEEERAIKEMCYKSGEYYRIQYPQEHQSTEMVSPSPSLENEQLPMETIEHDLWKGDSNTIPTKFNNMERERETSGRKVSVQCMSRTHDKSCENEGGDYFAAQRNKYVNGKRSEALPFEKPPTASKYSNIKATNSSERVRKYHFKGVKKKKWISEEQRNSPNTGTDKGIPTSHSKVRTNYQQNYQRKDDETASSIRSVRQTERNTYFNSAEPRRSTYVFYRNTRVIQEPTFNGYTDKYSSGSYNAPTWRKRNPHAKTFSKFKTTIQSQAGMEMKKKGE", "length": 405 }, "evidence": [ { "id": "F1SPZ2", "url": "https://omabrowser.org/oma/group/F1SPZ2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7J5K1-1", "protein_name": "Uncharacterized protein C12orf50 homolog isoform X1", "gene_name": "CUNH12orf50", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNTTLQKESQEGNPPPSQSQEPLKPMENVSRPIHNPLVLKTNFEEEEEEEEEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHAPPDVSSSKSVAPTVEKELEKPLENGSELQEGDGLTVPTKFSLFERPGEAKTSLDRKPRTDIAAFENGGGDCYAPQRIIFLGVNESEALAEVKDITSKCSNVKESKDSLHPKRPLATRLVPATHVLNATENIGVKCRENPSSMNDVQPVRKPHFKGVKKRKWIYDEPKNFPGSGMRRAGHTPNPKHKMSYHHHNKNRNAENASYMHVQRDSVRTVTLNTPPRSRPTSGPYNKDDVNKEPKLNLCPDKHMPTSYNGSAWRRRIPFSKTYSKTEKIYPEPRRNGSK", "length": 414 }, "evidence": [ { "id": "F1SPZ2", "url": "https://omabrowser.org/oma/group/F1SPZ2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3YX67-1", "protein_name": "RIKEN cDNA 1700017N19 gene", "gene_name": "1700017N19Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNTTLQKESQEGSPSPTQSQESLKPMENVSRPIHHPLVLKTNFEEEEEEEEEPNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHAPPDIPSSKSVAPTVEKELEKPLETGSELQEGDGLTVPTKFSLFERAGEAKTSLDRKPRTDIAAFENGGGDCYAPQRIIFLGVDESEALAEDKEATSKCSNVKEESKNGLHPKHPLTTRLMPTTHVLNATENISMKCRETPSSMNDVQPVRKPHFKGVKKRKWIYDEPKNFPGSGMRRAVHIPNPKHKMSYHHHNKNRNAENASYTHAPRDAVRTVTLNAPPRSRPTSRSYNKADVNKEPKLNLCPDKHMSTSYNGSAWRRRIPFSKTYSKTEKVYPEPRRNGSK", "length": 415 }, "evidence": [ { "id": "F1SPZ2", "url": "https://omabrowser.org/oma/group/F1SPZ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6AYU0-1", "protein_name": "Uncharacterized protein C12orf50 homolog", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNTTLQKESQEGSPPPTQSQEPLKPMENVSRPIHHPLVLKTNFEEEEEEEEKPNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHAPPDIPSSKSIAPTVEKELEKPLENGSELQEGDGLTVPTKFSLFERAGEAKTSLDRKPRTDIAAFENGGGDCYAPQRIIFLGVDESEALAEDKETTSKGSNAKEESKNGLHPKHPLTARLVPTTHVLNATENISMKCRENPSSMNDVQPVRKPHFKGVKKRKWIYDEPKNFPGSGMRRAVHIPNPKHKMSYHHHNKNRNAENASYTHAQRDAVRTVTLNAPPRSRPTSGSYNKADVNKDPKLNLCPDKHMSTSYNGSAWRRRIPFSKTYSKTEKIYPEPRRNGSK", "length": 415 }, "evidence": [ { "id": "F1SPZ2", "url": "https://omabrowser.org/oma/group/F1SPZ2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8NA57-1", "protein_name": "Uncharacterized protein C12orf50", "gene_name": "C12orf50", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEMQQNCSISCFWETQPLGCVKISCIFYHSKPRNINGLFLPPSSNITLQKEIQEGIPLQSQSQEPLKPQENISRPIHHPLVLKTNFEEEEEVDEQNDASSLWTKTPEEIEEKRAIKEMCYKSGEYYRFHTPPDILSSKSMTPTAEKQLEKPLENGSELQEGDSLTVPTKLSQYERQGEIKTSLHGKPKTDIAAFENGGGDCYVPQRVIFLGVDESEALTEEKEITISKCSNTKDNKDSPHPKHSLTTRLVPTTHVLNATENISMKCREDPSSMNDVQPVKKPHFKGVKKRKWIYDEPQNFPNSGMQRAVQAPRPQNKMSYHRNNKNRNAENASYIHVQRDAVRTVALNAPSRSRPTHGSYNKVHANREPKPNLSPDKYTSTSYNDSAWRKRIPFSKTYSKSEKIYPEPRRNGSK", "length": 414 }, "evidence": [ { "id": "F1SPZ2", "url": "https://omabrowser.org/oma/group/F1SPZ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "poly(A)+ mRNA export from nucleus", "id": "GO:0016973", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016973", "evidence": [ { "database": "UniProtKB", "id": "F1SPZ2", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F1SPZ2", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SPZ2", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 117, "end_pos": 119, "annotation": "n_glycosylation_sequon" }, { "start_pos": 201, "end_pos": 203, "annotation": "n_glycosylation_sequon" }, { "start_pos": 304, "end_pos": 306, "annotation": "n_glycosylation_sequon" }, { "start_pos": 308, "end_pos": 310, "annotation": "n_glycosylation_sequon" }, { "start_pos": 404, "end_pos": 406, "annotation": "n_glycosylation_sequon" }, { "start_pos": 431, "end_pos": 433, "annotation": "n_glycosylation_sequon" }, { "start_pos": 458, "end_pos": 460, "annotation": "n_glycosylation_sequon" }, { "start_pos": 52, "end_pos": 54, "annotation": "n_glycosylation_sequon" }, { "start_pos": 91, "end_pos": 93, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SPZ2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 461, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SPZ2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SPZ2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SPZ2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SPZ2" }, { "id": "PF15663", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15663" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Zinc-finger CCCH", "eco_id": "ECO_0000259", "start_pos": 8, "end_pos": 98, "start_aa": "Trp", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 117, "end_pos": 119 }, { "start_pos": 201, "end_pos": 203 }, { "start_pos": 304, "end_pos": 306 }, { "start_pos": 308, "end_pos": 310 }, { "start_pos": 404, "end_pos": 406 }, { "start_pos": 431, "end_pos": 433 }, { "start_pos": 458, "end_pos": 460 }, { "start_pos": 52, "end_pos": 54 }, { "start_pos": 91, "end_pos": 93 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQ31-1", "uniprot_ac": "F1SQ31", "uniprot_id": "F1SQ31_PIG", "mass": { "chemical_mass": 26638.0, "monoisotopic_mass": 26638.0 }, "refseq": { "ac": "XP_013843830", "name": "natural killer cells antigen CD94-like", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843830" }, "gene_names": [ { "name": "LOC106507518", "type": "recommended", "evidence": [ { "id": "F1SQ31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ31" } ] }, { "name": "LOC106507518", "type": "synonym", "evidence": [ { "id": "XP_013843830", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843830" } ] } ], "protein_names": [ { "name": "C-type lectin domain-containing protein", "type": "recommended", "evidence": [ { "id": "F1SQ31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ31/entry#names_and_taxonomy" } ] }, { "name": "natural killer cells antigen CD94-like", "type": "synonym", 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"length": 141, "header": "tr|A0A8W4FDD6-1|A0A8W4FDD6_PIG Computationally mapped isoform of Mago homolog B, exon junction complex subunit OS=Sus scrofa OX=9823 GN=MAGOHB PE=3 SV=1 CANONICAL=F1SQ44-1" }, "locus": { "chromosome": "5", "start_pos": 61433554, "end_pos": 61425894, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096877.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096877.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076320.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076320.1" } ] } }, { "isoform_ac": "A0A8W4FIG4-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ44/entry#A0A8W4FIG4-1", "sequence": { "sequence": "MSMASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 111, "header": "tr|A0A8W4FIG4-1|A0A8W4FIG4_PIG Computationally mapped isoform of Mago homolog B, exon junction complex subunit OS=Sus scrofa OX=9823 GN=MAGOHB PE=3 SV=1 CANONICAL=F1SQ44-1" }, "locus": { "chromosome": "5", "start_pos": 61433554, "end_pos": 61425888, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000091974.1", "url": "https://www.ensembl.org/id/ENSSSCT00000091974.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079014.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079014.1" } ] } }, { "isoform_ac": "F1SQ44-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ44/entry#F1SQ44-1", "sequence": { "sequence": "MSMASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 148, "header": "tr|F1SQ44-1|F1SQ44_PIG Isoform 1 of Mago homolog B, exon junction complex subunit OS=Sus scrofa OX=9823 GN=MAGOHB PE=3 SV=1 CANONICAL=F1SQ44-1" }, "locus": { "chromosome": "5", "start_pos": 61433554, "end_pos": 61425888, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000682.6", "url": "https://www.ensembl.org/id/ENSSSCT00000000682.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000667.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000667.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQ44", "url": "https://www.uniprot.org/uniprotkb/F1SQ44" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518306", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518306", "resource": "KEGG Pathway" }, { "id": "R-SSC-159236", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-159236", "resource": "Reactome", "description": "Transport of Mature mRNA derived from an Intron-Containing Transcript" }, { "id": "R-SSC-72163", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72163", "resource": "Reactome", "description": "mRNA Splicing - Major Pathway" }, { "id": "R-SSC-72187", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-72187", "resource": "Reactome", "description": "mRNA 3'-end processing" }, { "id": "R-SSC-975957", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-975957", "resource": "Reactome", "description": "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" } ], "orthologs": [ { "uniprot_canonical_ac": "F1M0X6-1", "protein_name": "Mago homolog B, exon junction complex subunit", "gene_name": "Magohb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 148 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3GTN1-1", "protein_name": "Protein mago nashi homolog", "gene_name": "Magoh", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 146 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "P49028-1", "protein_name": "Protein mago nashi", "gene_name": "mago", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSTEDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEAFVHQSVMEELKRIIIDSEIMQEDDLPWPPPDRVGRQELEIVIGDEHISFTTSKTGSLVDVNRSKDPEGLRCFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 147 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "P50594-1", "protein_name": "Protein mago nashi homolog", "gene_name": "MAGOH", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 146 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P61327-1", "protein_name": "Protein mago nashi homolog", "gene_name": "Magoh", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 146 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q0VC92-1", "protein_name": "Protein mago nashi homolog 2", "gene_name": "MAGOHB", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAMASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 148 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q55E21-1", "protein_name": "Protein mago nashi homolog", "gene_name": "magoh", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDVDTKIELATDSAMDITSPENDNNKTTATATSSSETQTTEDILKTETQKQKDDFYLRYYVGHKGKYGHEFLEFEFRSGNKLRYANNSHYKSENLIRKEVCVSDGVISEIKKVILDSGIMLEDDKNWPEPDVVGKQELEIVFKDEHISFSTTKIGSLMDVEKSDDPEGLKVMFYLIQDLKCLVFSLIGLHFKIKPI", "length": 197 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q566Y8-1", "protein_name": "Protein mago nashi homolog", "gene_name": "magoh", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSTSDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 147 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q96A72-1", "protein_name": "Protein mago nashi homolog 2", "gene_name": "MAGOHB", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVASDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI", "length": 148 }, "evidence": [ { "id": "F1SQ44", "url": "https://omabrowser.org/oma/group/F1SQ44/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "RNA splicing", "id": "GO:0008380", "url": 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"name": "catalytic step 2 spliceosome", "id": "GO:0071013", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071013", "evidence": [ { "database": "UniProtKB", "id": "F1SQ44", "url": "https://www.uniprot.org/uniprotkb/F1SQ44" } ], "pmid": "" }, { "name": "exon-exon junction complex", "id": "GO:0035145", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035145", "evidence": [ { "database": "UniProtKB", "id": "F1SQ44", "url": "https://www.uniprot.org/uniprotkb/F1SQ44" } ], "pmid": "" }, { "name": "exon-exon junction subcomplex mago-y14", "id": "GO:1990501", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990501", "evidence": [ { "database": "UniProtKB", "id": "F1SQ44", "url": "https://www.uniprot.org/uniprotkb/F1SQ44" } ], "pmid": "" }, { "name": "spliceosomal complex", "id": "GO:0005681", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005681", "evidence": [ { "database": "UniProtKB", "id": "F1SQ44", "url": "https://www.uniprot.org/uniprotkb/F1SQ44" } ], "pmid": "" } ] } ] }, "pro_annotation": 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQ45-1", "uniprot_ac": "F1SQ45", "uniprot_id": "F1SQ45_PIG", "mass": { "chemical_mass": 47510.0, "monoisotopic_mass": 47510.0 }, "refseq": {}, "gene_names": [ { "name": "STYK1", "type": "recommended", "evidence": [ { "id": "F1SQ45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ45" } ] } ], "protein_names": [ { "name": "Tyrosine-protein kinase STYK1", "type": "recommended", "evidence": [ { "id": "F1SQ45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ45/entry#names_and_taxonomy" } ] }, { "name": "2.7.10.2", "type": "synonym", "evidence": [ { "id": "F1SQ45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ45/entry#names_and_taxonomy" } ] }, { "name": "Novel oncogene with kinase domain", "type": "synonym", "evidence": [ { "id": "F1SQ45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ45/entry#names_and_taxonomy" } ] }, { "name": "Serine/threonine/tyrosine kinase 1", "type": "synonym", "evidence": [ { "id": "F1SQ45", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ45/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQ45", "url": "https://www.uniprot.org/uniprotkb/F1SQ45" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "STYK1", "url": "https://www.uniprot.org/uniprotkb/F1SQ45", "locus": { "chromosome": "5", "start_pos": 61421406, "end_pos": 61397025, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000634", "url": "https://www.ensembl.org/id/ENSSSCG00000000634" } ] } } ], "crossref": [ { "id": "F1SQ45", "url": "https://alphafold.ebi.ac.uk/entry/F1SQ45", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000634", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000634", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001245", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001245", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008266", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008266", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050122", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050122", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24416", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24416", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24416:SF631", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24416:SF631", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07714", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SQ45", "url": "https://www.uniprot.org/uniprotkb/F1SQ45", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ45-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ45-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGDERGMTRMLLECKLSDKLCIIQEQQYEIIVIPAFLVGIFLILLGVILWLFIREQRAQRRSPGPQGTAHPPSRGLSWEEAGHGGNMFVPLKETSVESLLQISTHALAKLQLPREQVSEVLQQIHNGSCGIYRTKVYIGDPAKPKSVVVKALKESAGLQEVQDFLGRIQFYQYLGKHKNLVQLEGCCTERLPLYMVLEDVAQGDLLSFLWICRRDVMTMDGLPYDLTEKQIYHIGKQVLSALEFLQDKHLFHGDVAARNVLIQADLTAKLCGLGLAYEVHSRGAISSTRVVPLKWLAPERLLLTSASIKGDIWSFGILLYEMVTLAPPYPEVPPTSILQYLQRRKIMKRPSSCTHTMYGLMKSCWHWSEGSRPSLGELHSRLEAAARTANDKAVLQVPELVVPELYAAVAGVSVQSLSYSYSIL", "length": 424, "header": "tr|F1SQ45-1|F1SQ45_PIG Isoform 1 of Tyrosine-protein kinase STYK1 OS=Sus scrofa OX=9823 GN=STYK1 PE=4 SV=3 CANONICAL=F1SQ45-1" }, "isoforms": [ { "isoform_ac": "F1SQ45-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ45/entry#F1SQ45-1", "sequence": { "sequence": 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[], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQ45", "url": "https://www.uniprot.org/uniprotkb/F1SQ45" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular 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"table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQ62-1", "uniprot_ac": "F1SQ62", "uniprot_id": "F1SQ62_PIG", "mass": { "chemical_mass": 53202.0, "monoisotopic_mass": 53202.0 }, "refseq": {}, "gene_names": [ { "name": "TP23", "type": "recommended", "evidence": [ { "id": "F1SQ62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ62" } ] } ], "protein_names": [ { "name": "Basic proline-rich protein", "type": "synonym", "evidence": [ { "id": "F1SQ62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ62/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus 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"https://omabrowser.org/oma/group/QPHINSG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SQ51", "url": "https://www.uniprot.org/uniprotkb/F1SQ51", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ51-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ51-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ62", "url": "https://www.uniprot.org/uniprotkb/F1SQ62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ62-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ62-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLPILLSVALLALSSARSPFFDLEDANSNSAEKFLRPPPGGGPPRPPPPEESQGEGHQKRPRPPGDGPEQGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPAGGLQQGPAPSHVGPKKKPPPPGAGHPPRPPPPANESQPGPRPPPGPPSPPANDSQEGSPPSADGPQQGPAPSGDKPKKKPPPPAGPPPPPPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPPPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPTGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAGPPPPPPPPPGPPPPGPAPPGARPRPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPPPGPSPPRPPPGPPPQ", "length": 566, "header": "tr|F1SQ62-1|F1SQ62_PIG Isoform 1 of Basic proline-rich protein OS=Sus scrofa OX=9823 GN=TP23 PE=4 SV=3 CANONICAL=F1SQ62-1" }, "isoforms": [ { "isoform_ac": "F1SQ51-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ62/entry#F1SQ51-1", "sequence": { "sequence": 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"evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000674.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000674.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000659.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000659.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQ51", "url": "https://www.uniprot.org/uniprotkb/F1SQ51" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "F1SQ62", "url": "https://www.uniprot.org/uniprotkb/F1SQ62" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 184, "end_pos": 186, "annotation": "n_glycosylation_sequon" }, { "start_pos": 202, "end_pos": 204, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SQ62-F1", "pdb_chain": 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"https://www.ensembl.org/id/ENSSSCG00000000623" } ] } } ], "crossref": [ { "id": "F1SQ67", "url": "https://alphafold.ebi.ac.uk/entry/F1SQ67", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000623", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000623", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR002475", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002475", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036834", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036834", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "AMCTTSA", "url": "https://omabrowser.org/oma/group/AMCTTSA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14965", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14965", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14965:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14965:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "F1SQ67", "url": "https://www.uniprot.org/uniprotkb/F1SQ67", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ67-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ67-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCTTSTCDLEEIPLDDDDSNSMEFKILEFYVTHHVFKNSSAVFSPKLLRTRSLSQKGPGSWPVKEAWTQGPWPCRSSQSSEKAINLAKKKSSWRTLFGVAEKEENSQSVPTGFRFEGPRRVETQSGSHSQQWPRSLSNVEQRLDHEAVDPKVVSIANRVAEIVYSWPPLEELQHQGGRFTPKRNREKPCVQLQGSQARAPSAKKDGEDQIIARIVELLKYSGDQLERELKKDSILMTSFQDGLSYSVFKTITDQFLRGVDTRGESEVKAQSFKAALAIDAMAKLTTIDNHPMNRVLGFGTKYLKENFSPWVQQHGGWEKVLGTSHEEVD", "length": 329, "header": "tr|F1SQ67-1|F1SQ67_PIG Isoform 1 of BCL2 like 14 OS=Sus scrofa OX=9823 GN=BCL2L14 PE=3 SV=2 CANONICAL=F1SQ67-1" }, "isoforms": [ { "isoform_ac": "F1SQ67-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ67/entry#F1SQ67-1", "sequence": { "sequence": "MCTTSTCDLEEIPLDDDDSNSMEFKILEFYVTHHVFKNSSAVFSPKLLRTRSLSQKGPGSWPVKEAWTQGPWPCRSSQSSEKAINLAKKKSSWRTLFGVAEKEENSQSVPTGFRFEGPRRVETQSGSHSQQWPRSLSNVEQRLDHEAVDPKVVSIANRVAEIVYSWPPLEELQHQGGRFTPKRNREKPCVQLQGSQARAPSAKKDGEDQIIARIVELLKYSGDQLERELKKDSILMTSFQDGLSYSVFKTITDQFLRGVDTRGESEVKAQSFKAALAIDAMAKLTTIDNHPMNRVLGFGTKYLKENFSPWVQQHGGWEKVLGTSHEEVD", "length": 329, "header": "tr|F1SQ67-1|F1SQ67_PIG Isoform 1 of BCL2 like 14 OS=Sus scrofa OX=9823 GN=BCL2L14 PE=3 SV=2 CANONICAL=F1SQ67-1" }, "locus": { "chromosome": "5", "start_pos": 60349307, "end_pos": 60335015, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000669.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000669.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000654.2", "url": "https://www.ensembl.org/id/ENSSSCP00000000654.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQ67", "url": "https://www.uniprot.org/uniprotkb/F1SQ67" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7K115-1", "protein_name": "Apoptosis facilitator Bcl-2-like protein 14 isoform X1", "gene_name": "Bcl2l14", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCSTSMHDLEDIPLEDDDSNSLEFKILTFYARHHVFKNPPAVFSPKLSRTRSLSQKALGTWSTDSWTQVSLPCKSSLSSEKHISLSKKKSSWRTFFRATEEESPPSSPKEIQAQGIQGPFAVERQCLKLQGGFHNQHWARSLSSVEQRLQCEAVDPKVASIANRVAEIVYSWPPAEDSHIQGSSFKLKESAPERLYLHFQGPQPVSCDSKKADGEDQVISRIVELLKYSGDHLGREMKKDKALMSSFQDGLSYSAFKTIADLFLRDIDTRGESEIRAHGFKAALAIDAIAKLTAIDNHPMNRMLGFGTKYLKEYFSPWVQQNGGWEKILGISHEEVD", "length": 337 }, "evidence": [ { "id": "F1SQ67", "url": "https://omabrowser.org/oma/group/F1SQ67/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q6AYK4-1", "protein_name": "Apoptosis facilitator Bcl-2-like protein 14", "gene_name": "Bcl2l14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCSTSVYDLEDIPLEDDDPNSIEFKILAFYARHHVFKSTPAVFSPKLSRTRSLSQKALGTWSTDSWTQISLPCRDSLSSEKHISLGKKKSSWRTLFRVTEKEEEPPSSPKEIHAQGPFPVERQGRNQHWSRSLSSVEQCLESEAVDSKVACIANRVAEIVYSWPPPDDSQSQGGGKFKESVPKILHFELQGPQLRPCDSKKDGEDQIINRIVELLKYSGDQLGREIKRDKALVSIFQEGLSYSVFRTITDLFLRDVDTRGESEIKAQGFKAALAIDAIAKLTAIDNHPMNRMLGFGTKYLREYFSPWVQQNGGWEKILGLSHEEVD", "length": 326 }, "evidence": [ { "id": "F1SQ67", "url": "https://omabrowser.org/oma/group/F1SQ67/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9BZR8-1", "protein_name": "Apoptosis facilitator Bcl-2-like protein 14", "gene_name": "BCL2L14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MCSTSGCDLEEIPLDDDDLNTIEFKILAYYTRHHVFKSTPALFSPKLLRTRSLSQRGLGNCSANESWTEVSWPCRNSQSSEKAINLGKKKSSWKAFFGVVEKEDSQSTPAKVSAQGQRTLEYQDSHSQQWSRCLSNVEQCLEHEAVDPKVISIANRVAEIVYSWPPPQATQAGGFKSKEIFVTEGLSFQLQGHVPVASSSKKDEEEQILAKIVELLKYSGDQLERKLKKDKALMGHFQDGLSYSVFKTITDQVLMGVDPRGESEVKAQGFKAALVIDVTAKLTAIDNHPMNRVLGFGTKYLKENFSPWIQQHGGWEKILGISHEEVD", "length": 327 }, "evidence": [ { "id": "F1SQ67", "url": "https://omabrowser.org/oma/group/F1SQ67/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9CPT0-1", "protein_name": "Apoptosis facilitator Bcl-2-like protein 14", "gene_name": "Bcl2l14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCSTSVYDLEDIPLEDDDPNSIEFKILAFYARHHVFKNTPAVFSPKLSRTRSLSQKALGTWSTDSWTQVSLPCRGSPSSEKNISLGKKKSSWRTLFRVAEKEEGLPSSPKEIRAQGPQGPFPVERQSGFHNQHWPRSLSSVEQRLESEVVDSKVACIANRVAEIVYSWPPPDVIHSQGGSKLKERVSEILYFRFEGPCDSKNKDGEDQIISKIVELLKFSGDQLGREIKKDKALMSSFQDGLSYSTFKTITDLFLRDVDTRGESEVKARGFKAALAIDAIAKLTAIDNHPMNRMLGFGTKYLREYFSPWVQQNGGWEKILGISHEEVD", "length": 328 }, "evidence": [ { "id": "F1SQ67", "url": "https://omabrowser.org/oma/group/F1SQ67/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SQ67", "url": "https://www.uniprot.org/uniprotkb/F1SQ67" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "F1SQ67", "url": "https://www.uniprot.org/uniprotkb/F1SQ67" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "F1SQ67", "url": "https://www.uniprot.org/uniprotkb/F1SQ67" } ], "pmid": "" }, { "name": "positive regulation of extrinsic apoptotic signaling pathway", "id": "GO:2001238", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001238", "evidence": [ { "database": "UniProtKB", "id": "F1SQ67", "url": "https://www.uniprot.org/uniprotkb/F1SQ67" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 306, "end_pos": 308, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"mass": { "chemical_mass": 25366.0, "monoisotopic_mass": 25366.0 }, "refseq": {}, "gene_names": [ { "name": "MKRN2OS", "type": "recommended", "evidence": [ { "id": "F1SQ90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ90" } ] } ], "protein_names": [ { "name": "MKRN2 opposite strand", "type": "synonym", "evidence": [ { "id": "F1SQ90", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQ90/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQ90", "url": "https://www.uniprot.org/uniprotkb/F1SQ90" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MKRN2OS", "url": "https://www.uniprot.org/uniprotkb/F1SQ90", "locus": { "chromosome": "13", "start_pos": 68524710, "end_pos": 68534780, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011581", "url": "https://www.ensembl.org/id/ENSSSCG00000011581" } ] } } ], "crossref": [ { "id": "F1SQ90", "url": "https://alphafold.ebi.ac.uk/entry/F1SQ90", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011581", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011581", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR032016", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032016", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053921", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053921", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053922", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053922", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR33963", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33963", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33963:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33963:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16044", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16044", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF22795", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22795", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SQ90", "url": "https://www.uniprot.org/uniprotkb/F1SQ90", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ90-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ90-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"header": "tr|F1SQC7-1|F1SQC7_PIG Isoform 1 of Proline rich transmembrane protein 3 OS=Sus scrofa OX=9823 GN=PRRT3 PE=4 SV=3 CANONICAL=F1SQC7-1" }, "locus": { "chromosome": "13", "start_pos": 66207937, "end_pos": 66204209, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012653.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012653.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012321.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012321.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 171, "start_aa": "Thr", "end_pos": 171, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr171", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", 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"categories": [ "Protein" ] }, { "id": "A0A8D1EQ41-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1EQ41-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQE3-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRTILTPEMGGYRVWGQVWGGCRQGLGICAVPKAAGFGTEARHQLQSRGSSKRLGSLGDKPFRRLLQPENLSREELVDVLREAVVDQKGPLVTLNKPQGLPVTGKPGELTLVSVLPELSQCLGLGERELQVVRASGKETSGLVLLSSCPQTASRLQKFFTHSQRARKPTATYCAVTDGIPAASEGKIQAALKMEHTDGASLVVPVKSPSRKDFLKGVKWTLSHFRVLASGSGCALVQLQPLTAFPSQLQVHMVLQLCPVLGDHKYSACVGTVLGQRFLLPAENTKPQRQVLDEALLSRLHLTPAQAAQLPLHIHLHRLHLPGTRPRDAPIELLAPLPSYFSRTLQCLGLQYQ", "length": 352, "header": "tr|F1SQE3-1|F1SQE3_PIG Isoform 1 of RNA pseudouridine synthase D3 OS=Sus scrofa OX=9823 GN=RPUSD3 PE=4 SV=2 CANONICAL=F1SQE3-1" }, "isoforms": [ { "isoform_ac": "A0A8D0U1Y9-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE3/entry#A0A8D0U1Y9-1", "sequence": { "sequence": "MRTILTPEMGGYRVWGQVWGGCRQGLGICAVPKAAGFGTEARHQLQSRGSSKRLGSLGDKPFRRLLQPENLSREELVDVLREAVVDQKGKPGELTLVSVLPELSQCLGLGERELQVVRASGKETSGLVLLSSCPQTASRLQKFFTHSQRARKPTATYCAVTDGIPAASEGKIQAALKMEHTDGASLVVPVKSPSRKDFLKGVKWTLSHFRVLASGSGCALVQLQPLTAFPSQLQVHMVLQLCPVLGDHKYSACVGTVLGQRFLLPAENTKPQRQVLDEALLSRLHLTPAQAAQLPLHIHLHRLHLPGTRPRDAPIELLAPLPSYFSRTLQCLGLQYQ", "length": 337, "header": "tr|A0A8D0U1Y9-1|A0A8D0U1Y9_PIG Computationally mapped isoform of RNA pseudouridine synthase D3 OS=Sus scrofa OX=9823 GN=RPUSD3 PE=4 SV=1 CANONICAL=F1SQE3-1" }, "locus": { "chromosome": "13", "start_pos": 66133743, "end_pos": 66126526, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000067550.2", "url": "https://www.ensembl.org/id/ENSSSCT00000067550.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061204.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061204.1" } ] } }, { "isoform_ac": "A0A8D1EQ41-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE3/entry#A0A8D1EQ41-1", "sequence": { "sequence": "MLEIRMGGTSGRHQLQSRGSSKRLGSLGDKPFRRLLQPENLSREELVDVLREAVVDQKGPLVTLNKPQGLPVTGKPGELTLVSVLPELSQCLGLGERELQVVRASGKETSGLVLLSSCPQTASRLQKFFTHSQRARKPTATYCAVTDGIPAASEGKIQAALKMEHTDGASLVSQGLGGEEEGTLQRYYPHRGVKGIDLGWAVQVNDDFTVALSRVCWEQGGNRGR", "length": 225, "header": "tr|A0A8D1EQ41-1|A0A8D1EQ41_PIG Computationally mapped isoform of RNA pseudouridine synthase D3 OS=Sus scrofa OX=9823 GN=RPUSD3 PE=4 SV=1 CANONICAL=F1SQE3-1" }, "locus": { "chromosome": "13", "start_pos": 66133394, "end_pos": 66130334, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089680.1", "url": "https://www.ensembl.org/id/ENSSSCT00000089680.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068582.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068582.1" } ] } }, { "isoform_ac": "F1SQE3-1", "url": "https://www.uniprot.org/uniprotkb/F1SQE3/entry#F1SQE3-1", "sequence": { "sequence": "MRTILTPEMGGYRVWGQVWGGCRQGLGICAVPKAAGFGTEARHQLQSRGSSKRLGSLGDKPFRRLLQPENLSREELVDVLREAVVDQKGPLVTLNKPQGLPVTGKPGELTLVSVLPELSQCLGLGERELQVVRASGKETSGLVLLSSCPQTASRLQKFFTHSQRARKPTATYCAVTDGIPAASEGKIQAALKMEHTDGASLVVPVKSPSRKDFLKGVKWTLSHFRVLASGSGCALVQLQPLTAFPSQLQVHMVLQLCPVLGDHKYSACVGTVLGQRFLLPAENTKPQRQVLDEALLSRLHLTPAQAAQLPLHIHLHRLHLPGTRPRDAPIELLAPLPSYFSRTLQCLGLQYQ", "length": 352, "header": "tr|F1SQE3-1|F1SQE3_PIG Isoform 1 of RNA pseudouridine synthase D3 OS=Sus scrofa OX=9823 GN=RPUSD3 PE=4 SV=2 CANONICAL=F1SQE3-1" }, "locus": { "chromosome": "13", "start_pos": 66133743, "end_pos": 66126526, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012645.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012645.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012313.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012313.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153857", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153857", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0ZRV6-1", "protein_name": "RNA pseudouridine synthase D3", "gene_name": "RPUSD3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "SLPSVPAARGPPRDAIAACRDTERGDPRKGRPLGPEAVLGLLEASVVHREGALLALSKPADLPVLGRPGELSLTALLPALRRRLGLPAELHVVKAPARECSGLVLLSACPRVTEQLQRSFTAARRRAQFPATYSAVTVGIPAEAEGEISVGLCWQQKGDAAAVVAVPSPGRRSVARGEVKCTLTRYRLLGAAGGCALLQLQPRTAFPEQLQVHLTLLLCPALGDHRHASRVGTVLGEPFLLPPQETPTPCTQVLDAELMSRLQLSPHHRLPLHLHLQQLVLPHTVLSAPPPPHFLRTLRLLGLPSPPLPPH", "length": 311 }, "evidence": [ { "id": "F1SQE3", "url": "https://omabrowser.org/oma/group/F1SQE3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A6T2-1", "protein_name": "RNA pseudouridine synthase D3", "gene_name": "Rpusd3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEALRALRSVSVVWRPGLGSSARRRDAGFGTEARKRKDLVEDQPFPGLLRAENLGLEELAQVLRAAVVDQKGRPGELTLLSVLPWLSQALGLEHQELQVVRAPGKEASGLVLLSSCPQTTSHLQKFFTHSRRAQRPTATYCAITDGVPEPSEGTVHIALRLERMDGIDLAVPVTSPSRKDIQEGVKRTLSHFHVTATGCGCALVQLQPLTVFPSQLQVHMALQLCPILGDHTYAARVGSVLGQRFLWPAETTKPQRQVLDEALLRYLHLSPSQVAQMPLHLHLHRLLLPGTRPRDPPSELLAPLPPYFSRTLQCLRLSQQ", "length": 320 }, "evidence": [ { "id": "F1SQE3", "url": "https://omabrowser.org/oma/group/F1SQE3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q14AI6-1", "protein_name": "Mitochondrial mRNA pseudouridine synthase Rpusd3", "gene_name": "Rpusd3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGALRVLRYVSMIWRPELGSCARQRDAGFGTEARRPSQPHRSSKHKDLVEDQPFPGLLRTENLGLEELAHVLRAAVVDQKGPLVTLNKPQGLPVTGRPGELTLLSVLPQLSQALGLEHQELQVVRAPGKEASGLVLLSSCPQTASRLQKFFIHSRRAQRPTATYCAVTDGIPEPSEGTVCMPLKMEQMNDVDLAVPVMSPSRKDIQEGVKRTLSRFHVMATGRGCALVQLQPLTVFPNQLQVHMALQLCPILGDHTYAARVGTVLGQRFLWPAETTKPQRQVLDEALLRHLRLSPSQVAQMPLHLHLHRLLLPGTGSRDPPSELLAPLPPYFSRTLQCLRLSQQ", "length": 344 }, "evidence": [ { "id": "F1SQE3", "url": "https://omabrowser.org/oma/group/F1SQE3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P087-1", "protein_name": "Mitochondrial mRNA pseudouridine synthase RPUSD3", "gene_name": "RPUSD3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRAVLAREMDGRRVLGRFWSGWRRGLGVRPVPEDAGFGTEARHQRQPRGSCQRSGPLGDQPFAGLLPKNLSREELVDALRAAVVDRKGPLVTLNKPQGLPVTGKPGELTLFSVLPELSQSLGLREQELQVVRASGKESSGLVLLSSCPQTASRLQKYFTHARRAQRPTATYCAVTDGIPAASEGKIQAALKLEHIDGVNLTVPVKAPSRKDILEGVKKTLSHFRVVATGSGCALVQLQPLTVFSSQLQVHMVLQLCPVLGDHMYSARVGTVLGQRFLLPAENNKPQRQVLDEALLRRLHLTPSQAAQLPLHLHLHRLLLPGTRARDTPVELLAPLPPYFSRTLQCLGLRLQ", "length": 351 }, "evidence": [ { "id": "F1SQE3", "url": "https://omabrowser.org/oma/group/F1SQE3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "enzyme-directed rRNA pseudouridine synthesis", "id": "GO:0000455", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000455", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" }, { "name": "mRNA pseudouridine synthesis", "id": "GO:1990481", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990481", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" }, { "name": "positive regulation of mitochondrial translation", "id": "GO:0070131", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070131", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" }, { "name": "pseudouridine synthesis", "id": "GO:0001522", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001522", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" }, { "name": "pseudouridine synthase activity", "id": "GO:0009982", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009982", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" }, { "name": "ribonucleoprotein granule", "id": "GO:0035770", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035770", "evidence": [ { "database": "UniProtKB", "id": "F1SQE3", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 70, "end_pos": 72, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SQE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQE3" }, { "id": "PF00849", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00849" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Pseudouridine synthase RsuA/RluA-like", "eco_id": "ECO_0000259", "start_pos": 91, "end_pos": 252, "start_aa": "Leu", "end_aa": "Met", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 70, "end_pos": 72 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQF9-1", "uniprot_ac": "F1SQF9", "uniprot_id": "F1SQF9_PIG", "mass": { "chemical_mass": 22403.0, "monoisotopic_mass": 22403.0 }, "refseq": {}, "gene_names": [ { "name": "OGG1", "type": "recommended", "evidence": [ { "id": "F1SQF9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQF9" } ] } ], "protein_names": [ { "name": "8-oxoguanine DNA glycosylase", "type": "synonym", "evidence": [ { "id": "F1SQF9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQF9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQF9", "url": "https://www.uniprot.org/uniprotkb/F1SQF9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OGG1", "url": 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0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ 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"https://www.uniprot.org/uniprotkb/F1SQU9" } ] } ], "protein_names": [ { "name": "FA complementation group B", "type": "synonym", "evidence": [ { "id": "F1SQU9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQU9/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FANCB", "url": "https://www.uniprot.org/uniprotkb/F1SQU9", "locus": { "chromosome": "X", "start_pos": 11384912, "end_pos": 11409057, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000012130", "url": "https://www.ensembl.org/id/ENSSSCG00000012130" } ] } } ], "crossref": [ { "id": "F1SQU9", "url": "https://alphafold.ebi.ac.uk/entry/F1SQU9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000012130", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000012130", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156438", "url": "https://www.ncbi.nlm.nih.gov/gene/100156438", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR033333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100156438", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156438", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LAFHRVC", "url": "https://omabrowser.org/oma/group/LAFHRVC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "K7GLD5", "url": "https://www.orthodb.org/?gene=K7GLD5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28450", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28450", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28450:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28450:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF28312", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28312", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF28318", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28318", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF28327", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28327", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6783310", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6783310", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9833482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQU9-1", "url": "https://www.uniprot.org/uniprotkb/F1SQU9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GLD5", "url": "https://www.uniprot.org/uniprotkb/K7GLD5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "K7GLD5-1", "url": "https://www.uniprot.org/uniprotkb/K7GLD5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSNEQERLLCYNGEVLVFCLSKGNFVDKGPAKITMIHVRRMTFDRGTGVFVQKSTGSFSIKEEYSHLKIMCCNSVSDFRTGINLPYVMIQCNKENNIFRYFLLFLHSTNKFEKRLSFRLGYELKDSIRVLNGPLVLWRHVQTFFYISSQTGRVVTVSFNFSSIDWVGEIENLGIVLLGLKRYYLSEEGCTPKPSKSDYATWNTPFCVYSLEREEVLSDTYLIPPVYSSVVTCVHVCATEIVDNQLRLSLIALTQKNQLISFQNGTPKSVCQLPFEDPCAVHLMDSGGGNLHFIVSFRSNDACAVRAKNFQVVDKWEKMSSILVDDFLGTGTEQVLLLFKDSLSSDCLSSFKITNLDNINYSSQPVDCSQDDLFDNEQDNCSLMIPPLERRLKVSVYVCFQELQQNLLLKEKILSKSYKAFTNLFQGKDDSTPSAKEDYLVTLCGKEENPVCTSDEKLSENFQDSKQLVEKIWYRVIEDSLVVGVKTTSSLKVSLSHVTLSLSMHRACNSSFPGIKCQNRVLQLNRNSSPPPCLVPYEVRSEVKRIKLSVDSEQEEEKKESLVCEQPSEKDCVQMITAVTSLSPLLAFSNFCCIVLLQIRERENANYSKVHYVHCGRIFLSLEDLSSGKYLLTFPKKKPLEHMEDLFALLAVLHRACFQITSRSYALTSVKSWLLEHMECEVIKEFPEVCFCKRPGNFYGTFFSWKERTPFEGILIVYFRNQTVLFQCLHNLSRVLPVNSFFKNLKLGSEDILIDHLTLALEKELVTLGSLSSASAKVESNLVQSSEASEEKSSNVAASSDREERIHLYREELQREKQQTLGTNLNVSGALYREMTLKLAEVQLKSDLAAQKLTDL", "length": 856, "header": "tr|F1SQU9-1|F1SQU9_PIG Isoform 1 of FA complementation group B OS=Sus scrofa OX=9823 GN=FANCB PE=4 SV=3 CANONICAL=F1SQU9-1" }, "isoforms": [ { "isoform_ac": "F1SQU9-1", "url": "https://www.uniprot.org/uniprotkb/F1SQU9/entry#F1SQU9-1", "sequence": { "sequence": "MSSNEQERLLCYNGEVLVFCLSKGNFVDKGPAKITMIHVRRMTFDRGTGVFVQKSTGSFSIKEEYSHLKIMCCNSVSDFRTGINLPYVMIQCNKENNIFRYFLLFLHSTNKFEKRLSFRLGYELKDSIRVLNGPLVLWRHVQTFFYISSQTGRVVTVSFNFSSIDWVGEIENLGIVLLGLKRYYLSEEGCTPKPSKSDYATWNTPFCVYSLEREEVLSDTYLIPPVYSSVVTCVHVCATEIVDNQLRLSLIALTQKNQLISFQNGTPKSVCQLPFEDPCAVHLMDSGGGNLHFIVSFRSNDACAVRAKNFQVVDKWEKMSSILVDDFLGTGTEQVLLLFKDSLSSDCLSSFKITNLDNINYSSQPVDCSQDDLFDNEQDNCSLMIPPLERRLKVSVYVCFQELQQNLLLKEKILSKSYKAFTNLFQGKDDSTPSAKEDYLVTLCGKEENPVCTSDEKLSENFQDSKQLVEKIWYRVIEDSLVVGVKTTSSLKVSLSHVTLSLSMHRACNSSFPGIKCQNRVLQLNRNSSPPPCLVPYEVRSEVKRIKLSVDSEQEEEKKESLVCEQPSEKDCVQMITAVTSLSPLLAFSNFCCIVLLQIRERENANYSKVHYVHCGRIFLSLEDLSSGKYLLTFPKKKPLEHMEDLFALLAVLHRACFQITSRSYALTSVKSWLLEHMECEVIKEFPEVCFCKRPGNFYGTFFSWKERTPFEGILIVYFRNQTVLFQCLHNLSRVLPVNSFFKNLKLGSEDILIDHLTLALEKELVTLGSLSSASAKVESNLVQSSEASEEKSSNVAASSDREERIHLYREELQREKQQTLGTNLNVSGALYREMTLKLAEVQLKSDLAAQKLTDL", "length": 856, "header": "tr|F1SQU9-1|F1SQU9_PIG Isoform 1 of FA complementation group B OS=Sus scrofa OX=9823 GN=FANCB PE=4 SV=3 CANONICAL=F1SQU9-1" }, "locus": { "chromosome": "X", "start_pos": 11403191, "end_pos": 11386488, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013269.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013269.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012913.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012913.4" } ] } }, { "isoform_ac": "K7GLD5-1", "url": "https://www.uniprot.org/uniprotkb/F1SQU9/entry#K7GLD5-1", "sequence": { "sequence": "MSSNEQERLLCYNGEVLVFCLSKGNFVDKGPAKITMIHVRRMTFDRGTGVFVQKSTGSFSIKEEYSHLKIMCCNSVSDFRTGINLPYVMIQCNKENNIFRYFLLFLHSTNKFEKRLSFRLGYELKDSIRVLNGPLVLWRHVQTFFYISSQTGRVVTVSFNFSSIDWVGEIENLGIVLLGLKRYYLSEEGCTPKPSKSDYATWNTPFCVYSLEREEVLSDTYLIPPVYSSVVTCVHVCATEIVDNQLRLSLIALTQKNQLISFQNGTPKSVCQLPFEDPCAVHLMDSGGGNLHFIVSFRSNDACAVRAKNFQVVDKWEKMSSILVDDFLGTGTEQVLLLFKDSLSSDCLSSFKITNLDNINYSSQPVDCSQDDLFDNEQDNCSLMIPPLERRLKVGFVSIQELQQNLLLKEKILSKSYKAFTNLFQGKDDSTPSAKEDYLVTLCGKEENPVCTSDEKLSENFQDSKQLVEKIWYRVIEDSLVVGVKTTSSLKVSLSHVTLSLSMHRACNSSFPGIKCQNRVLQLNRNSSPPPCLVPYEVRSEVKRIKLSVDSEQEEEKKESLVCEQPSEKDCVQMITAVTSLSPLLAFSNFCCIVLLQIRERENANYSKVHYVHCGRIFLSLEDLSSGKYLLTFPKKKPLEHMEDLFALLAVLHRACFQITSRSYALTSVKSWLLEHMECEVIKEFPEVCFCKRPGNFYGTFFSWKERTPFEGILIVYFRNQTVLFQCLHNLSRVLPVNSFFKNLKLGSEDILIDHLTLALEKELVTLGSLSSASAKVESNLVQSSEASEEKSSNVAASSDREERIHLYREELQREKQQTLGTNLNVSGALYREMTLKLAEVQLKSDLAAQKLTDL", "length": 855, "header": "tr|K7GLD5-1|K7GLD5_PIG Computationally mapped isoform of FA complementation group B OS=Sus scrofa OX=9823 GN=FANCB PE=4 SV=2 CANONICAL=F1SQU9-1" }, "locus": { "chromosome": "X", "start_pos": 11403191, "end_pos": 11386488, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000035226.3", "url": "https://www.ensembl.org/id/ENSSSCT00000035226.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028664.2", "url": "https://www.ensembl.org/id/ENSSSCP00000028664.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 432, "start_aa": "Thr", "end_pos": 432, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr432", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100156438", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100156438", "resource": "KEGG Pathway" }, { "id": "R-SSC-6783310", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6783310", "resource": "Reactome", "description": "Fanconi Anemia Pathway" }, { "id": "R-SSC-9833482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9833482", "resource": "Reactome", "description": "PKR-mediated signaling" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0X9C3-1", "protein_name": "Fanconi anemia complementation group B", "gene_name": "FANCB", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MCGEIKMLLSEQQHVLAYNGELLVFQLSKAKRVEGAADRTAKLCVRRMAFDRDAQLFVQKSSGAFSVRAKHSETEIVCCDCATRSKTGVVLPCVLVKMKKHNGVVEHLLLLLHSSDRFEQCCHFRLDYELKEDVRLFAGPSVLWRHANKLFYVSSDTCTVLSAPVQLSSIAWMGEIEGEGTVVLGIRAACLPESEDGDEFSTSDRAIWGSEFFGYAIEMQKMLTGARFMPHAYSRVVSSVCVCKSERLQKQLRISAAAITQKNQLIWFQDGVPKGVCELPYEKPCLIKTAVTSSNDLLFIVSFSSGNICVVQRENLQVTSKWQKVKSVLVDDFIGSGTEQLLLLFNDDSNTDALNMFKITDFGKINYESGINYKDDVPAAEGLQENGLLTIQALETRLQAGLASVRELQQHLGLKKRVILQSCRALIDLVEGRNHILPSAKKEGLVSLWDDVGKPHSVSKEPSLTPKLQDHFIEKLWQRVVGDNLVVGVKLTESFCLSVSDISLSLVMDQDFSLISPIIECRNKIIKLNKVFSALSVSSCQIEPPQKKMKLDLRSKNDLKEEFHKRCSRTQLDKANTVTAVTSLSPLLAFHRVCCAVLLHAKKQKHQNGDLQKSKRMTLLCGKILLSLEDISNGKYSLNMLKDNSYCTGSMEDIAAILAVSIRSSFQILSSDCTLTRVNSWLLGEMECVPFKECHDMVFAHKAGNVYGTVFSWTLKSPFEGVLTLFCRSLTVLFQCLHSLIRVLPPRCDVKLMKSGSKGVLTEQLVLALEKEMFTSRSFLSSKESKAENNLTWWNEPGKKINDAPVASLLDSEDGVQQFRERLQNEKEQCMLSMNETMDGTLYQEVALKVAEAQLSSDMIVWRLSKS", "length": 867 }, "evidence": [ { "id": "F1SQU9", "url": "https://omabrowser.org/oma/group/F1SQU9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7JZ95-1", "protein_name": "Fanconi anemia group B protein", "gene_name": "Fancb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDGNQATPFNEQAKCLCYNGEILVFYLSKGDFEMPTDTSVLYVKRMAYDRETGTFVLISKGFLIIKEKASDLKILCCKCVSDFRTRINLPCILIQYKKYNSGAFKYYILFLHNSNKFEKYLSFKLNHALDESLKIFDGPIVLWQYLNKFFYISSQIGKVTNISVNLSSIEWVGEVENFGLIFLGLPEPPEAKCTHKLSESDYEFSNSTLCAYALTTQEILSNSYLIPLAYSNVITHVHVCAAEMVDDKLRMSLIALTRKNQLVLFQDGIPVRVCQLPFLDPCSVQILDSGKENRYFIVSFNSKACAVSEKKFKVVAKWKQVSIILTNDFLGVGTDQVLVIFEDVLNTDQLTSFAITDLIRITYSTEPLNCSQEPYPEDEHENYYLVLPALEAQLKASIVFLNKLQKHISFKDEFIVNSWKDFLNSIYGKVHSMSSNEEDCVVPFCDEDENSIHTPEENLSENFQEPKHIVEQTWCRVLDDDLVVGVKVTSLKISPNEMTLSLIMNQGNRSSFQLTKCQSQVTRLSMNSFPEAYLMPVETGPDIKRIKLTSSSKEEENSFCGQSPKAESTHVITAVTSLSPHLVFNKLCCTLLLNISDRDNGENSVHDCMVCDNLEFNLQDLFSMNHLLAFPEKESIEHMEDLLSLLAVLHKYCFHVTSPTGALNLMKVCLLKHMKCEIINGFREIYLYKKHQNYGTLFSWEPRTTFEGILTVYCRNQGVLFQCLDHIIKFLPEICFFKYLKLGNEDFIINNLSSTLEKELVTFCSLSTSAFEYVRDGFMHQCQTSKTNSCATTASEGMDKICLHKQEVQREKVIQDLNLKVNGCSYVEMTLALAETQLKSDLNVVKLTNL", "length": 850 }, "evidence": [ { "id": "F1SQU9", "url": "https://omabrowser.org/oma/group/F1SQU9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9SC39-1", "protein_name": "FA complementation group B", "gene_name": "FANCB", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSTEQERFCCYNGEVLIFHLSEGNFVDEGPKKTPVLHVRRMVFGRGPEGFVQKSTGFFSIKEEYSHLKIMCCDCVSDFRTGINLPYVMIQCIKEENIFKYFLLFLHGTNKFEKCLSFRLGYELKDSIRVLNGPLVLWRHGQTFFYISSQTGKVVTVPMNFSSVEWAGEIENLGMVLLGPKRCYLSAEGCTPKPSKSDYATWNTHFCAYSLERAEIISDTYIIPPAYTSMITFVHVYSTEIVNDQLRMSLIALTQKNQLISFLNGTPTSVCQLPFGDPCAVQLVDSGEEELLFIISFKSSHACAVWEKSFQVAAKWEKIRSVLIDDFFGTGTEQVLLLFKDSWNSDCRSSFEIMGHDAFNCSGETLDCNEDDLFDDKHGNCYLVVLPLERRLKVGFISIWELQQHLLLKEKIISKSYKALMNLFQRKDDSTLSAEEECLVTLCGEEENPVCTFNEKLSDNFQDLEQLVEKIWYRVIEDSLVIGVKATSSWKVSLNHVTLLLSVDQGSNSTFPLIKCQNKIFKLTRNSSPVLSSVPYEVGSEVKRIKLSVDSKEEKEESVVCEQPLKKEYVQMITAVTALPPLLTFSNFCCIVLLQMRENGNSSEAHYVQCGRIVLSVEDLSSGKCVLTFPERKPIEHMEDLFTLLAAWHRACFQITSPMFALTSVRVWLLEHMKCEVLKEFPEIWFCKRPGSFYGTLFNWKQRTPFEGILVVYSRNQTVLFQCLHDLSTVLPINSFFKYLELESEDFLIGHLAVALEKELVTLGSPPSALVKVETSLVQNCEVSKEKSSDDGAALSDIEKSIHLYRKELQREKEQMLGTNLKVSGALYREMTLKLAEVQLNSDLAAKQLTDL", "length": 852 }, "evidence": [ { "id": "F1SQU9", "url": "https://omabrowser.org/oma/group/F1SQU9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0M142-1", "protein_name": "FA complementation group B", "gene_name": "Fancb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPFNEQAKFLCYNGEVLVFQLSGGEFADLEKPTDPSVLGVKRMIFDRETSTFLLISTVFLNINEKDSHLKILCCNCVSDFRTRINLPCILIQCRKYNSKAFKYYILFLHSPNQLEKLLSFELNHALDERAKIFDGPIVFWQYLNQFFYISSEIGKVTNISVSLSSIEWIGEIENFGLGFLGLADPSGDKYKCTRKLSESDYEFSNSSFCAYALKSQEMLSNSYLIPLAYSTVVTRVHVCAAEMVNKQLKMSLIALTRKNQLILFQNGIPVRTCQLPFLDPRSVQILDAGKRNRFFIVSFLSKACAVSEKKFKVVAKWEQLSLVLVNDFAGVGTEQVLVVFEDSLDADQLTSFTVTDFVKIWYSTKPLDCCEDPLAEEEHENYYLVLPALEAQLDNSFIFLNQFQQHISFKDKFIANSWKALLNSVYGNVDSMPSDEEVQLEQGGLVPFCDEDENSVPTPEENLPDNFPEPEHVIEQTWCHVLDDDLVVGVKVTSLKPSDGMTLSLIMDQANRSSFHLMKCQSQLISLSMNSFPETYLLSKETGPEIKRMKLTSGSQEEESSFCGQSAKAESTYVITAITSLSPLLVFNKLSCTVLLNVSDRDNPKNTVHDYVFCGHLDFNLQDLFSKNHLLAFPKKQSIEQTENLFSLLTALPKYAFCVTSPTHAPNLMKVWLLKHMKCAKIQECTEIYLYKKLRNCEALFSWEQRTAFEGILTIYCRSLGVLFQCLDHLIKVIPEICSFKYLRFENEDFLVDHLSSTLEAELVTFCSVSTSAFEYVRGGCMYNCSTSKTDNRATTFSGRRAKIRHYKRQVQREKILKHLNRTVNVSSYAEMTLALAEIQLRSDLIVKTLTDL", "length": 853 }, "evidence": [ { "id": "F1SQU9", "url": "https://omabrowser.org/oma/group/F1SQU9/", "database": "OMA" } ], "glygen_name": 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"Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Fanconi anaemia nuclear complex", "id": "GO:0043240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043240", "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "negative regulation of double-strand break repair via homologous recombination", "id": "GO:2000042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2000042", "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "pmid": "" }, { "name": "interstrand cross-link repair", "id": "GO:0036297", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036297", "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "pmid": "" }, { "name": "positive regulation of double-strand break repair via homologous recombination", "id": "GO:1905168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905168", "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "pmid": "" }, { "name": "replication-born double-strand break repair via sister chromatid exchange", "id": "GO:1990414", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990414", "evidence": [ { "database": "UniProtKB", "id": "F1SQU9", "url": "https://www.uniprot.org/uniprotkb/F1SQU9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 160, "end_pos": 162, "annotation": "n_glycosylation_sequon" }, { "start_pos": 264, "end_pos": 266, "annotation": "n_glycosylation_sequon" }, { "start_pos": 360, "end_pos": 362, "annotation": "n_glycosylation_sequon" }, { "start_pos": 380, "end_pos": 382, "annotation": "n_glycosylation_sequon" }, { "start_pos": 509, "end_pos": 511, "annotation": "n_glycosylation_sequon" }, { "start_pos": 527, "end_pos": 529, "annotation": "n_glycosylation_sequon" }, { "start_pos": 606, "end_pos": 608, "annotation": "n_glycosylation_sequon" }, { "start_pos": 721, "end_pos": 723, "annotation": "n_glycosylation_sequon" }, { "start_pos": 731, "end_pos": 733, "annotation": "n_glycosylation_sequon" }, { "start_pos": 826, "end_pos": 828, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SQU9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 856, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SQU9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SQU9" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 432 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 160, "end_pos": 162 }, { "start_pos": 264, "end_pos": 266 }, { "start_pos": 360, "end_pos": 362 }, { "start_pos": 380, "end_pos": 382 }, { "start_pos": 509, "end_pos": 511 }, { "start_pos": 527, "end_pos": 529 }, { "start_pos": 606, "end_pos": 608 }, { "start_pos": 721, "end_pos": 723 }, { "start_pos": 731, "end_pos": 733 }, { "start_pos": 826, "end_pos": 828 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", 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"o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQV2-1", "uniprot_ac": "F1SQV2", "uniprot_id": "F1SQV2_PIG", "mass": { "chemical_mass": 27324.0, "monoisotopic_mass": 27324.0 }, "refseq": { "ac": "XP_005673486", "name": "gem-associated protein 8 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673486" }, "gene_names": [ { "name": "GEMIN8", "type": "recommended", "evidence": [ { "id": "F1SQV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQV2" } ] }, { "name": "GEMIN8", "type": "synonym", "evidence": [ { "id": "XP_005673486", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673486" } ] } ], "protein_names": [ { "name": "Gem nuclear organelle associated protein 8", "type": "synonym", "evidence": [ { "id": "F1SQV2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQV2/entry#names_and_taxonomy" } ] }, { "name": "gem-associated protein 8 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005673486", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673486" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQV2", "url": "https://www.uniprot.org/uniprotkb/F1SQV2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GEMIN8", "url": "https://www.uniprot.org/uniprotkb/F1SQV2", "locus": { "chromosome": "X", "start_pos": 10647028, "end_pos": 10671184, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000012127", "url": "https://www.ensembl.org/id/ENSSSCG00000012127" } ] } } ], "crossref": [ { "id": "ENSSSCG00000012127", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000012127", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100513635", "url": "https://www.ncbi.nlm.nih.gov/gene/100513635", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR034754", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034754", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "QYFAHTE", "url": "https://omabrowser.org/oma/group/QYFAHTE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SQV2", "url": "https://www.orthodb.org/?gene=F1SQV2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16238", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16238", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16238:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16238:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15348", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15348", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-191859", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-191859", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005673486", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673486", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SQV2", "url": "https://www.uniprot.org/uniprotkb/F1SQV2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQV2-1", "url": "https://www.uniprot.org/uniprotkb/F1SQV2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAETAPGQAPESWCSHPVYARYWHHYHQAMAWMRSHQSTYRKAVESFFSSPWYFPPAGLAQGAYAQEGGSPWPDSEQPPAPGGSCHQYPHAGGPEPGPRGREEPAWSAEEEEEEQEEESESDDGGIECDLSNMEITEELRQYFAQTERHREERRRQQQLDAARLDDYVNADHDLYCDTRRSALPPAERPGERRAAEMRRLYGASAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPLKF", "length": 239, "header": "tr|F1SQV2-1|F1SQV2_PIG Isoform 1 of Gem nuclear organelle associated protein 8 OS=Sus scrofa OX=9823 GN=GEMIN8 PE=4 SV=1 CANONICAL=F1SQV2-1" }, "isoforms": [ { "isoform_ac": "F1SQV2-1", "url": "https://www.uniprot.org/uniprotkb/F1SQV2/entry#F1SQV2-1", "sequence": { "sequence": "MAAETAPGQAPESWCSHPVYARYWHHYHQAMAWMRSHQSTYRKAVESFFSSPWYFPPAGLAQGAYAQEGGSPWPDSEQPPAPGGSCHQYPHAGGPEPGPRGREEPAWSAEEEEEEQEEESESDDGGIECDLSNMEITEELRQYFAQTERHREERRRQQQLDAARLDDYVNADHDLYCDTRRSALPPAERPGERRAAEMRRLYGASAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPLKF", "length": 239, "header": "tr|F1SQV2-1|F1SQV2_PIG Isoform 1 of Gem nuclear organelle associated protein 8 OS=Sus scrofa OX=9823 GN=GEMIN8 PE=4 SV=1 CANONICAL=F1SQV2-1" }, "locus": { "chromosome": "X", "start_pos": 10662319, "end_pos": 10647317, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013266.5", "url": "https://www.ensembl.org/id/ENSSSCT00000013266.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012910.1", "url": "https://www.ensembl.org/id/ENSSSCP00000012910.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQV2", "url": "https://www.uniprot.org/uniprotkb/F1SQV2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-191859", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-191859", "resource": "Reactome", "description": "snRNP Assembly" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2LWK8-1", "protein_name": "Gem-associated protein 8", "gene_name": "Gemin8", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTSKWRTTASWYSHPVYARYWRHYHHAMAWMQSHQRAYKKSRDSYFTSPWFSPYGVLPWSSLDYEAGHPWNYQGQHMAWQESPYNVSHLKSSGQPLYSNSRTQTSAREYEAPQEEEEIESDSDNEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDDYVNADHGLYYNHHRSVEPPSEKPGERRQAEMKRLYGDSAPKILAMEAAVQLSFDKYCDKKQPKYWPVIPLKF", "length": 238 }, "evidence": [ { "id": "F1SQV2", "url": "https://omabrowser.org/oma/group/F1SQV2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0X5C0-1", "protein_name": "Gem nuclear organelle associated protein 8", "gene_name": "GEMIN8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQTPQEMEETEPWYSQKMYARYWKHYDLAMRWMHRHQEAYRKAMESFYHVPWPPYAASPSRRYSDWDGDDPPCTHNRFSNYSPRGRAQQYMDAQPGKEDDDREEEEEDSEVEEDSESEGEFEYDLSNMEITEELRQFFAQTERHREELRFTLQCTVPMMQFWEPTFVAGRQQQLEAEQQEMYVEADQDLYRNMKRSVEPPAERPGERRVAEMEKLYGDEAAKILAMETAMQLIFDRNCDKKQPKYWPIIPLKL", "length": 254 }, "evidence": [ { "id": "F1SQV2", "url": "https://omabrowser.org/oma/group/F1SQV2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q1LZ79-1", "protein_name": "Gem-associated protein 8", "gene_name": "GEMIN8", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEAKSESTQASESWSSHPVYARYWQHYHQAMAWMRSHQSAYQKAVESVVTSPWYYPATDLAQSPAAKGGTSPKSRSKSPSASGDACRRRSRPGKPGPQRRSTEKPARFAEDNDSESDDCGIVCDLSNMVITDELRQYFAETEQHREELRRQHQLDAARLKDYVNADHGLYCDKRGRSTLPPTERPGERRQAEMKRLYGASAAKIQAMETAMQLSFDKHCDRKQPKYWPVIPLKF", "length": 234 }, "evidence": [ { "id": "F1SQV2", "url": "https://omabrowser.org/oma/group/F1SQV2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8BHE1-1", "protein_name": "Gem-associated protein 8", "gene_name": "Gemin8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASNWRASASWYSHPVYARYWQHYHHAMLWMQGHQNAYRKFRDSYFTSPWLFPHGALPWNSPAYEAGHPWDSQGQHMAQQESPYRVSHPKSPGQPLRNSSRTQASTRGNEARCEEEELESDSDDEVECDLSNMEITEELRQYFAQTERHREERRRQQQLDAERLNDYVNADHGLYFNHRRSLEPPSEKPWERRQAEMKRLYGNSAPKILAMETAVQLSFDKHCDRKQPKYWPVIPLKF", "length": 238 }, "evidence": [ { "id": "F1SQV2", "url": "https://omabrowser.org/oma/group/F1SQV2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NWZ8-1", "protein_name": "Gem-associated protein 8", "gene_name": "GEMIN8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAVKASTSKATRPWYSHPVYARYWQHYHQAMAWMQSHHNAYRKAVESCFNLPWYLPSALLPQSSYDNEAAYPQSFYDHHVAWQDYPCSSSHFRRSGQHPRYSSRIQASTKEDQALSKEEEMETESDAEVECDLSNMEITEELRQYFAETERHREERRRQQQLDAERLDSYVNADHDLYCNTRRSVEAPTERPGERRQAEMKRLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPLKF", "length": 242 }, "evidence": [ { "id": "F1SQV2", "url": "https://omabrowser.org/oma/group/F1SQV2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SQV2", "url": "https://www.uniprot.org/uniprotkb/F1SQV2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SQV2", "url": "https://www.uniprot.org/uniprotkb/F1SQV2" } ], "pmid": "" }, { "name": "SMN complex", "id": "GO:0032797", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032797", "evidence": [ { "database": "UniProtKB", "id": "F1SQV2", "url": "https://www.uniprot.org/uniprotkb/F1SQV2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "spliceosomal snRNP assembly", "id": "GO:0000387", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000387", "evidence": [ { "database": "UniProtKB", "id": "F1SQV2", "url": "https://www.uniprot.org/uniprotkb/F1SQV2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SQV4-1", "uniprot_ac": "F1SQV4", "uniprot_id": "F1SQV4_PIG", "mass": { "chemical_mass": 24949.0, "monoisotopic_mass": 24949.0 }, "refseq": { "ac": "XP_003126507", "name": "single-pass membrane and coiled-coil domain-containing protein 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126507" }, "gene_names": [ { "name": "SMCO3", "type": "recommended", "evidence": [ { "id": "F1SQV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQV4" } ] }, { "name": "SMCO3", "type": "synonym", "evidence": [ { "id": "XP_003126507", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126507" } ] } ], "protein_names": [ { "name": "Single-pass membrane protein with coiled-coil domains 3", "type": "synonym", "evidence": [ { "id": "F1SQV4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQV4/entry#names_and_taxonomy" } ] }, { "name": "single-pass membrane and coiled-coil domain-containing protein 3", "type": "synonym", "evidence": [ { "id": "XP_003126507", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126507" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SQV4", "url": "https://www.uniprot.org/uniprotkb/F1SQV4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SMCO3", "url": "https://www.uniprot.org/uniprotkb/F1SQV4", "locus": { "chromosome": "5", "start_pos": 57746997, "end_pos": 57740226, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000610", "url": "https://www.ensembl.org/id/ENSSSCG00000000610" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000610", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000610", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511991", "url": "https://www.ncbi.nlm.nih.gov/gene/100511991", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR027895", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027895", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR040004", "url": "https://www.ebi.ac.uk/interpro/entry/IPR040004", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511991", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511991", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MSTNFHA", "url": "https://omabrowser.org/oma/group/MSTNFHA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SQV4", "url": "https://www.orthodb.org/?gene=F1SQV4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35972", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35972", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35972:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35972:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15047", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15047", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003126507", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003126507", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SQV4", "url": "https://www.uniprot.org/uniprotkb/F1SQV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQV4-1", "url": "https://www.uniprot.org/uniprotkb/F1SQV4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAQSDFLYPENPRRRQEVNRLHQELLDCLSDSFQATNKLIGVLNMHLGCRLASIEMKRDGTIKENCDIIIQAMMKIQKELQKVDEALKDKLEPTLYRKLQDIKERETEKIAIVQKVISVILGEATSAASAVAVKLVGSNVTTGIINKLVTVLAQIGASLLGSIGVAVLGLGIDMIFRAILGAVEKTQLQAAIKSYEKHLVEFKSASEKYHHAITEVTNTVKHQMK", "length": 225, "header": "tr|F1SQV4-1|F1SQV4_PIG Isoform 1 of Single-pass membrane protein with coiled-coil domains 3 OS=Sus scrofa OX=9823 GN=SMCO3 PE=4 SV=1 CANONICAL=F1SQV4-1" }, "isoforms": [ { "isoform_ac": "F1SQV4-1", "url": "https://www.uniprot.org/uniprotkb/F1SQV4/entry#F1SQV4-1", "sequence": { "sequence": "MAQSDFLYPENPRRRQEVNRLHQELLDCLSDSFQATNKLIGVLNMHLGCRLASIEMKRDGTIKENCDIIIQAMMKIQKELQKVDEALKDKLEPTLYRKLQDIKERETEKIAIVQKVISVILGEATSAASAVAVKLVGSNVTTGIINKLVTVLAQIGASLLGSIGVAVLGLGIDMIFRAILGAVEKTQLQAAIKSYEKHLVEFKSASEKYHHAITEVTNTVKHQMK", "length": 225, "header": "tr|F1SQV4-1|F1SQV4_PIG Isoform 1 of Single-pass membrane protein with coiled-coil domains 3 OS=Sus scrofa OX=9823 GN=SMCO3 PE=4 SV=1 CANONICAL=F1SQV4-1" }, "locus": { "chromosome": "5", "start_pos": 57746976, "end_pos": 57746302, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000656.3", "url": "https://www.ensembl.org/id/ENSSSCT00000000656.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000641.1", "url": "https://www.ensembl.org/id/ENSSSCP00000000641.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQV4", "url": "https://www.uniprot.org/uniprotkb/F1SQV4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511991", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511991", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YL61-1", "protein_name": "Single-pass membrane protein with coiled-coil domains 3", "gene_name": "SMCO3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALSDLLYPENPRRRQELIHLHRELLDCMSMNFHATNELAGVLNAHLGCTITHIKMRESSTVKENCDIIIRAMHEIQCQVQKIDGDMKEKLEPVLYQKLYDIKEPELEKIAIAHKVFSIVLGEVTSTAGMVAVKLLSSNLITITVCKLISLLAQIGASVLGGISITILGLGMEMILHAILGAVERNQLLAAVRSYEEHLAEFKEASEKYQRAIHEVTSLVRHQVQ", "length": 225 }, "evidence": [ { "id": "F1SQV4", "url": "https://omabrowser.org/oma/group/F1SQV4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9S718-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "SMCO3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MELRGQRNALHTNKCCPLTNHCRRILLANTAASAVRIWLLRGQLLLLLLCSGLQRPTIAVKIDFDLTPNSFDDQYRGCSQQVMEMLLQGDYFMEELESSKHYRKVWHQTHLNWLNQEKPLPGNMTITHALAVSVYLSDDRVHLDFSRAMASAAGSPQQYKHSFRFKYLHYFLTSAIQLLRKEIVSRKDSLCYEVQHELKGVYLRAPVGSIVRFGQFLSTSPAREQAQRFGNQTLFTMLTCLGAPVQDFSLKKEVLVPPYELFKVVNVSYHPRGNWLQLLSNGTQSTYNCQLLKASSRKCIPTPLVVASLSFLTSVIIFSKSGA", "length": 323 }, "evidence": [ { "id": "F1SQV4", "url": "https://omabrowser.org/oma/group/F1SQV4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0L6I4-1", "protein_name": "Single-pass membrane protein with coiled-coil domains 3 like 1", "gene_name": "Smco3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQSDFLYPQNPRRRQEVNRLHQQLLDCLSDCFQVTNKLTGLLNAHLGCRLAFIEMRSDETIKRNCDLIIQAVTKIQKELQKVDEALKDKLEPTLYRKLRDIKERETEKIAIVQKVISVILGEATAAASAVAVKLVGSNVTTGIISKLASVLTHIGTSILGSIGVAVLSLGIDMVVQAILGAVERTQLQSAIQSYEKHLTEFKAASEKYHHAIAEVTDAVKRQLR", "length": 225 }, "evidence": [ { "id": "F1SQV4", "url": "https://omabrowser.org/oma/group/F1SQV4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A2RU48-1", "protein_name": "Single-pass membrane and coiled-coil domain-containing protein 3", "gene_name": "SMCO3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQSDFLYPENPKRREEVNRLHQQLLDCLSDSFDVTNKLTEVLNMHLGCRLASIEMKRDGTIKENCDLIIQAIMKIQKELQKVDEALKDKLEPTLYRKLQDIKEKETDKIAIVQKVISVILGEATSAASAVAVKLVGSNVTTGIINKLVTVLAQIGASLLGSIGVAVLGLGIDMIVRAILGAVEKTQLQAAIKSYEKHLVEFKSASEKYNHAITEVINTVKHQMK", "length": 225 }, "evidence": [ { "id": "F1SQV4", "url": "https://omabrowser.org/oma/group/F1SQV4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "G3H4P7-1", "protein_name": "Single-pass membrane and coiled-coil domain-containing protein 3", "gene_name": "Smco3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAQSDFLYPENPRRRQEVNRLHQQLLDCLSDSFQVTNKLTGVLNTHLGCRLAFIEMKRDGTIKENCDIIIQAVVKIQKELQKVDEALKDKLEPTLYRKLQDIKERETEKMAIVQKVISVILGEATSAASAVAVKLLGSNVTTGIMNKLVTVLAHIGTSLLGSIGVAVLGLGIDIIFRAILGAVERSQLQAAIKSYEKHLVEFKAASERYHHAITEVTRAVTRQIR", "length": 225 }, "evidence": [ { "id": "F1SQV4", "url": "https://omabrowser.org/oma/group/F1SQV4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BQM7-1", "protein_name": "Single-pass membrane and coiled-coil domain-containing protein 3", "gene_name": "Smco3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAQSDFLYPQNPRRRQEVNRLHQQLLDCLSDSFQVTNKLTGVLNTHLGCRLAFIEMKSDGTIKENCDIIIQAMTKIQKELQKIDEALKDQLEPTLYRKLQDIKERETEKIAIVQKVISVILGEATSAASAVAVKLVGSSVTTGIISKLVSVLAHIGTSLLGSIGVAVLSLGIDMIIQAILGAVERTQLQAAIKSYEKHLEEFKAASAKYHHAITEVATAVKRQLR", "length": 225 }, "evidence": [ { "id": "F1SQV4", "url": "https://omabrowser.org/oma/group/F1SQV4/", "database": "OMA" } ], "glygen_name": 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"MSVIGFKNTDEKVSLNHRIEKEETVSHIGYFSSSYSVKKIQLGICLLLVELCERFTFFEVVCNMIPFCTVKLGYHNYQAAILNLCFIGTSILTPVFAGWLADICLGRNKLVYICLFLHFLGTALLSVAAFPLEDFYIGTHHMINNIPKKEQNRLFHVALVALCLGTGGVRAIVCPLGAYRLQEYGPQNRMSVFNWFYWIMNLNATIVFLGISYIQHTGAWTLVLLAPFMSTLMALISLHMIHYNLIYKPEKCCSLLTAFGVFVNALKTCCLRYCHLGGGVTSWLDHAKEKNGGCYSELHVEDTKFFFTLLPLFIFQLLYRMCIMQIPSGYYLQTMNSNLNLGGFLLPVSVMNVISILPLLILAPFMEYFSTCLFPSKRDGPFLPACIIAGNLSAALSVMVAGFFEIHRKHFPPVEQPLSGKVLTVSSMPCFHLVLQYVLLGVAETMVHPAFSVISYRFVPSTIRGTLMNFLTLFNGFGCFMGALLVELVYLISEGNWFPNTLNKGNLESFFFFLASLTLLNVLGFWSVSQRYCNLNHFNAQHISGSNLEETLPLHEKSLKFYGSTREFSSSIDLWETAL", "length": 579, "header": "tr|F1SQY3-1|F1SQY3_PIG Isoform 1 of Solute carrier family 15 member 5 OS=Sus scrofa OX=9823 GN=SLC15A5 PE=3 SV=3 CANONICAL=F1SQY3-1" }, "isoforms": [ { "isoform_ac": "F1SQY3-1", "url": "https://www.uniprot.org/uniprotkb/F1SQY3/entry#F1SQY3-1", "sequence": { "sequence": "MSVIGFKNTDEKVSLNHRIEKEETVSHIGYFSSSYSVKKIQLGICLLLVELCERFTFFEVVCNMIPFCTVKLGYHNYQAAILNLCFIGTSILTPVFAGWLADICLGRNKLVYICLFLHFLGTALLSVAAFPLEDFYIGTHHMINNIPKKEQNRLFHVALVALCLGTGGVRAIVCPLGAYRLQEYGPQNRMSVFNWFYWIMNLNATIVFLGISYIQHTGAWTLVLLAPFMSTLMALISLHMIHYNLIYKPEKCCSLLTAFGVFVNALKTCCLRYCHLGGGVTSWLDHAKEKNGGCYSELHVEDTKFFFTLLPLFIFQLLYRMCIMQIPSGYYLQTMNSNLNLGGFLLPVSVMNVISILPLLILAPFMEYFSTCLFPSKRDGPFLPACIIAGNLSAALSVMVAGFFEIHRKHFPPVEQPLSGKVLTVSSMPCFHLVLQYVLLGVAETMVHPAFSVISYRFVPSTIRGTLMNFLTLFNGFGCFMGALLVELVYLISEGNWFPNTLNKGNLESFFFFLASLTLLNVLGFWSVSQRYCNLNHFNAQHISGSNLEETLPLHEKSLKFYGSTREFSSSIDLWETAL", "length": 579, "header": "tr|F1SQY3-1|F1SQY3_PIG Isoform 1 of Solute carrier family 15 member 5 OS=Sus scrofa OX=9823 GN=SLC15A5 PE=3 SV=3 CANONICAL=F1SQY3-1" }, "locus": { "chromosome": "5", "start_pos": 56429064, "end_pos": 56345871, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000643.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000643.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000628.4", "url": "https://www.ensembl.org/id/ENSSSCP00000000628.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQY3", "url": "https://www.uniprot.org/uniprotkb/F1SQY3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100152242", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152242", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "F1SQY3", "url": "https://www.uniprot.org/uniprotkb/F1SQY3" } ], "pmid": "" }, { "name": "transmembrane transport", "id": "GO:0055085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055085", "evidence": [ { "database": "UniProtKB", "id": "F1SQY3", "url": "https://www.uniprot.org/uniprotkb/F1SQY3" } ], "pmid": "" }, { "name": "peptide transport", "id": "GO:0015833", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015833", "evidence": [ { "database": "UniProtKB", "id": "F1SQY3", "url": "https://www.uniprot.org/uniprotkb/F1SQY3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SQY3", "url": "https://www.uniprot.org/uniprotkb/F1SQY3" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "F1SQY3", "url": "https://www.uniprot.org/uniprotkb/F1SQY3" } ], "pmid": "" }, { "name": "symporter activity", "id": "GO:0015293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015293", "evidence": [ { "database": "UniProtKB", "id": "F1SQY3", "url": "https://www.uniprot.org/uniprotkb/F1SQY3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 203, "end_pos": 205, "annotation": "n_glycosylation_sequon" }, { "start_pos": 391, "end_pos": 393, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SQY3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 579, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SQY3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SQY3" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 203, "end_pos": 205 }, { "start_pos": 391, "end_pos": 393 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SR15-1", "uniprot_ac": "F1SR15", "uniprot_id": "F1SR15_PIG", "mass": { "chemical_mass": 199040.0, "monoisotopic_mass": 199040.0 }, "refseq": {}, "gene_names": [ { "name": "KIAA1549", "type": "recommended", "evidence": [ { "id": "F1SR15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SR15" } ] } ], "protein_names": [ { "name": "KIAA1549", "type": "synonym", "evidence": [ { "id": "F1SR15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SR15/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SR15", "url": "https://www.uniprot.org/uniprotkb/F1SR15" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21590:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12877", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12877", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SR15", "url": "https://www.uniprot.org/uniprotkb/F1SR15", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SR15-1", "url": "https://www.uniprot.org/uniprotkb/F1SR15-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"MLKESIMHSTAHVALTETTPGSQQSRSLQVRPSPSATTFDTAFFNQGQWTQSTAEHSVFLANYVSVTSNEVTEDEDMDNFLPETPWTTSREVSPARYITVRPPGPPRDMSDPMPTPSLPIIAFQDEEVTSAWQNTVQQPATSAGSPGRFSAFPSALPTSKGIIAAPSGSWVFYPTDAYGHVSSRTLPEITSSGVEGAETLLLGLPSSEPQTPGDGVTKQPPRPSGEVLPPPEDALATGRDRFPDVTADWGQSLDETISPKTYRPAGVSPVVLAFSSSTHLALFSTPLAFGPFSTQSADNPFLPSNSGEVSELPGRSLVPGHEADTHIRSLVSLFSPHTWCTSCTMVSPQYELSASLTEDVGSGDGAETLSLTLLEASSISPRSSIMADVPEFEEDAPAFNTLFPSRPIVPLSSPSVEISATGVAVSVERRMSSVLTSQVYSPHGHLPGSGSLDPAPAGSPSIAESHVMPSGVTAVVSSVSPRLPLDSSFRITANRNTPSPDVRGPGLFTSYGLDPSVDSSPFPAQGPASFSRHESARISDFASSVFSTPPLESSSWVPPSPTSRAKSTFSPQAFSALVETLTLTSSVNSPLPQLSVPNSTHLDLSQLRPSSELLLNTFTLLPASSEVSPRSSVPSESLKVLEASTVSQTDSEAPFTSAFTESTSSFEFSHTSRTSAVAPLVPSSPEPILPSETHFTPLWTAVQTTPALTESSLVSTLTPSEGDISAVQDHTSVPASSSEVIPTPTLPVTAGYPTPASSFVPELSPSPLPTEPDPLHGPSFVPTDVPRNTSTELIVSDTSVAPGNSVDTTPNSRTSSQNPHEGSTALPPPSLHPVTAPVPESEVHTPALLTTKPPYVCDISVPDAYLITTVLARRAVQEYIITSIKEVLKSHFNRVVELKVYELFADFTFLVTSGPFVYTAISVINVLINSKLVRDQTPLILAVKPSFLVPDSRFQVQTVLQFVPQSVDTGFCNFTQRIEKGLMVALSEVRKHHQGAYNLTVQILNITVGSSRLAPRRGPVNIVFAIKGVQGFLNGSEVSELLRNLSVVEFSFYLGYPVLQIAEPFQYPQLNLSQLLKSSWVRTVLLGVVEKQLQNEVFQAEMERKLAQLLSEVSTRRRMWRRATVAAGNSMVQVVNVSRLEGDDNPVQLIYFVEDQDGERLSAVKSSDLINRIDIQRAAIILGYRIQGAVAQPVDRVKRPEPESQSSNLWVIVGVVIPGLLVALIVVILYWKLCRTDKLDFQPDTVANIQQRQKLQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGPMKDHTTPSENGDVPSPKAKIPSKNIRHRGRVSPSDADSTVSEESSEREAGDKTPGAVTDGAPPSSGNEQHSSASIFEHVDRISRSSEASRRVPSKIQLIAMQPIPAPPVPHPILADRVAETNKINKEIQTALRHKSEIEHHRNKIRLRAKRRGHYEFPVVDDLSSGDTRERHRVYRRAQMQIDKILDPTASVPSVFIEPRKSSRIKRSPKPRRKHQVNGCPGDAERDRLITTDSDGTYKRPPGVHNSAYMGCPSDPDLPAEVQTPSSAELGRYPGLPFPASQYVPPQPSIEEARQTMHSLLDDAFALVAPSSQPPNAAAAGPGLPAGLPVNSTPSGEERRTTQWGSFYSPAQTANNPCSRYEDYGMTPPLGPLSRPGFGPGLLPSAELVPPEAHQPQASSEVTSFAARGIYSEEGPSVARPRPVGGTTGSQIQHLTQVGIASRIGAQPVEIPPGRGGQYGGPGWPSYGEDEAGRREATHVLGHQEYSSSPLFQAPRTSGREPSAPPGNLPPRGLPGAGLAYPASSTEDLQPGHSSASLIKAIREELLRLSQKQSAVQNFYS", "length": 1851, "header": "tr|F1SR15-1|F1SR15_PIG Isoform 1 of KIAA1549 OS=Sus scrofa OX=9823 GN=KIAA1549 PE=4 SV=3 CANONICAL=F1SR15-1" }, "locus": { "chromosome": "18", "start_pos": 10828642, "end_pos": 10742880, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017980.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017980.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017496.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017496.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 115, "start_aa": "Thr", "end_pos": 115, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr115", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1623, "start_aa": "Thr", "end_pos": 1623, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1623", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 754, "start_aa": "Thr", "end_pos": 754, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr754", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SR15", "url": "https://www.uniprot.org/uniprotkb/F1SR15" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YJ32-1", "protein_name": "KIAA1549", "gene_name": "KIAA1549", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGMTRFAARWRSALPALLPLLLAVPALRGSPAADEMSSEQRNFSFFSMDSKVHQSISGSRTQMALAESTLESQESHFLQTLLSSVTTPIDATSFNQEETARTSEGKSTPLIDFSVTSNEAFLSDDKFISPFPKVQWTPPLKSFAILTDHHSDNTVEAPRETLETPLLTPSLSIFSSPYDILGTAQQKTPLSAVLDYSTSLTELEPFVPDSGILTASRHLPLYPPDTGIYFTPVPSEEVDAMWENINRSVTSLPSGATSEGSPVHLKLLGENSHAAAGATARSGDIYTRMSSRATEAVGVRTDPAPSVPWAIVAATVSAESALFSISLPFATFPGHSAAMSTYPDTVLNAGLFTQKFSSTAPNLPADSEIPSQSELDTELISPVPFTRSYSSCLYCDSVSLLPEAGFSPEHDVGSGDYVETLSFTASEVQGVTPFTTVITDKYELEEPTPEIFDTSFPSRPVVSFSSRFAEIHDSTLFLLSTVDTALDDRKPESSPSYHELPGETSLDISGFQFSLPVAGTVSLAPNTRVEDPATSTVLLETATIPSHLVASHAVSPTTWLESPELKPSESVFLFDKTSTREELSLNISDFSSNLLSTPFLIEPSYLLVSSAVLTSHSVMQSDFSTLLPQTSLTGTSLLSEDVSSWDLATAVSSATDSEVSLFSVGQISYFYSNASSVPGAPVPEIIPSSGFPSGSSVFLEASSVLPVGSEAMFTSAVSGATSQLEPSPSSLQYVAPTLVLPASDTGPLRSSVLLDETNLISVFTTFPTTPILNASSSLLSTGLASDEDIGATVKASLLLTSLSESSTHTTALLTADPDGPTQHADASSILPSPTESLSATTLFVPTQFPLTSLPPTGYDVPTGAGDADTSVAASTIPTTAATSTTGRSSVSSSPPLVTSTRPGATILPSATSTTRQPYVCDIAVPDVYLVTAVLARRAVLQNVSESIREVLRAQFRRSVELEVYKISPKFAFLVTSGPFVYTAIAVINVLVNSSLLRGSAPPILSLQPSFTVPDSRFQVQTVLQFVPRNMDIGFCNFSQRIEKGLTMAFMEVSKQHQEFYNFTVQILNITLSRPGAAFRQGPVSIIFAIRDRYGFLNGSEVSEQLRNLSVVEFSFYLGFPVQQIAEPFHYPKLNVSQLMKSSWVRTVLLGVVDQRIQEEVFQAEMERKLAHLLNEALARGRIWRRASFAGSNIVQIVNVSRLDGVDNPVELIYFVEDQDGERFSALKCSDLMNRVDIQRAAIILGYRIDGTVAQPVEKLKESSSEAQNSNLWIIVGVAVPVAVVLLIVIILYWKLCRTDKLEFQPDTISNIQQRQKLQAPSVKGFDFAKQHLGQHNKDDVLIIHEPAPLPGPIKDTTPSENGDVPSPKSKTSSKPSKTVRHRGRVSPSDADSTASEQSSGRETGEETARPSAVANEGKPRRATKKGPPQSSSGNEQHSSASIFEHVDRMSRSSDASRRVPSKIQLIAMQPMAAPPVQNSVLSDRVAETNKINKEIQTALRHKSEIEHHRNKIRLRAKRKGHYEFPVVDDVVVVDSKEQHRIYRKAQMQIDKILDPGGSVPTVFIEPRKSSRAKRSPKQRRRHQINGSPIDAEKDRLITTDSDGTYKRPPGVNNSAYISDPDLPPEPQTSSSADLGKFPGLPSHPVSQYVPPQPSIEEARQTMHSLLDDAFALVAPSSQAASSTAVTPPGVSAGQPRYVEFGMTPPAAPGLLPRQNFGPGFLQPAELMHPDQQPPEVQYSSRGIYSEEMPSMARPRPVGSTAGSQIQHLTQVGIASRIGGQQVEIPSGRAGHGQPGGPGWPQYRGEDEYARRDAMHMHGHQEYSSSPVFQMPRTSARQPSVPPAQLPHNNLQGQGLCYTTSSTEDLQPGHSSASLIKAIREELLRLSQKQTTVQNFHS", "length": 1898 }, "evidence": [ { "id": "F1SR15", "url": "https://omabrowser.org/oma/group/F1SR15/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3Z9D0-1", "protein_name": "KIAA1549 homolog", "gene_name": "Kiaa1549", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREPRAGVALVPGRCGRGPSSRHRRPGLLLPGLWLLLLAGPASCASDELSLEQHSHSLRPSEFQPETSIMHSAAQVTLSETVPRSQPSISVLVLSSPSPPSFDTAFLSQRQQTRSTVEHSIFEANYISVTSNEVALDEEEMDNFLPDAHWTSSRVVSPVRYITPSPLDPPQETLEPGSTPSLPTISLQDEVLSGCQNTVPQATVHVESTYFGTSWSAFLTSEGIVPTPSGNSVLHPTESHSQLSRKALPETVASVTEGAENLLFSSWISVSQPSGDGMTQQPSVPLWEVSQSLVGALATSTDRYPNETTAWSEHPEKAIALRAHPSETTSPTDPAFSSPPSDLFSTPLSSVSFATQLPGFSDNSFLSSEATEALESRYSSMVPSFTDHPLVLSPEASLRPHTRCVSCVVSLSQQELARSLTEKEMGSGDRLETLSTASVEATHLFPLSSVGTDPSELEDPQEFNTLFPSRPVVSFSSRPVGLWKASTDVSPEVDVSSIATTRVYPPHSRLSTLSSLDSTFGFSVTNDVVMSSGVTHLFSSVIPSTHFDSSFSLTGNQNTPSLPAGNPSLLTSYSLLPSAQSKVFSDGTPPSSLELESGLDFTSSFYSTPPLDFSTPAPSLSEVLAFPSLMSSDPSAFFSQPFSTVAETFSLSNSMDLQSPQLSVLNPTSLEPSQSRSSADLPLNTITVLPSHSEMPSLPSSLSESLKFTEASRVSLRESDVYVVTSAFSETTSAFEFSPIPHESTVSTLVPSSSEPTLGVSTTGIHLTSLTTVFHSTPMLTESPPFLTLAPSDGSVRETDHHMPVLTTPSSVIPASTESISDPYLSASSSLVSEVSSSPLPTKPVMDSSLTLTDLPPNTSPEPSTSQEPSMPNTSTAPGDTVDSALDSEPMSQNPQGNSVPPPQPSLGPVTTSTIEATVGTPALATAKPPYVCDITVPDVYLITTVLARRAVQEYIITSIKEVLRIHFNRAVELKVYELFTDFTFLVTSGPFVYTAISVINVLINSKLVRDQTPLILSVKPSFLVPDPRFQVQTVLQFVPPSVDTGFCNFTQSIEKGLVTALFEVRKHQGTYNLTVQIVNVTIASPRVAPRRGPVNIIFAVKGSKGFLNGSEVSDLLRNLTVVEFSFYLGYPVLQIAEPFQYPQLNLSHLLKSSWVRTVLLGVVEKQLHNEVFPAEMERKLAQLLSEVPTRRRMWRRATVAAGNSVVQVVNVSRLEGEDNPVQLIYFVENQDGERLSAARSSDLINKVDLQRAAIILGYRIQGAIAQPVDRVKRPSPESQSSNLWVVVGVVIPVLVVTVIVVILYWKLCRTDKLDFQPDTVANIQQRQKLQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGPVKDHTTPSENGDVPSPKSKMPSKNLRHRGRVSPSDADSTVSEESSERDVGEKTTATAPENKAHRAPQSGAPLPSSTNEQHSSASIFEHVDRISRTSEASRRVPSKIQLIAMQPIPAPPVPHPVLADRVAETNKINKEIQSALRHKSEIEHHRNKIRLRAKRRGHYEFPVVDDLSSGDTKERHRVYRRAQMQIDKILDPAASVPSVFIEPRKSSRMKRSPKPRRKHQVNGCPADAEKDRLITTDSDGTYKRPPGVHNSAYIGCPSDPDLPADVQTPSSAELGRYPGLPFSASQYIPPQPSIEEARQTMHSLLDDAFALVAPSSQPTNAMGVGTGVPASLPVNSTPSREERRATQWGSFYSPAQTANNPCSRYEDYGMTPPSGPLPSRPSFGPGLLPSSELVPPEPPQPQSSSDTPYAARGIYSEEMPSVARPRPVGGTTGSQIQHLTQVGIASRIGAQPVEIPPGRGSQYGGPGWPVYGEEEAGRREATHMLGHQEYSSSPLFQVPRTSGREPSAPPGNLAHRGLQGPGLGYPTSSTEDLQPGHSSASLIKAIREELLRLSQKQGSVQNFHS", "length": 1937 }, "evidence": [ { "id": "F1SR15", "url": "https://omabrowser.org/oma/group/F1SR15/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FD9-1", "protein_name": "UPF0606 protein KIAA1549", "gene_name": "Kiaa1549", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEREPRARVALVPERCGRGPSSRHRRPGLLLPGLWLLLLAGPASCAPDDLSLAQHSHPVRPSDFLPERSILHSAAQVTLSETVPRSQPSISALVLSSPSATAFDTAFLSQRQQTQSTAEPSFFEANYGSVTSNEVALDDEEMDNFLPDAHWTSSRGVSPMRYITPSPPEPPQEMLEPGTTPSLPTISLPDEVLSGCQNTVQQATVYVEPSTYFGTSWSAFLTSEGIIPTPSRNSVLHPIEIHSQLSSKALPETVASVTEGAENLLFSSRISVSQPSGNGMTQQPSVPLWEVSQPLVGVLATSSDRYPNETTAWIEHPEEAIALRAHPGITTSPTDPTFSSQPSALFSTPLSSVSFATQLPGVSEDSFLSSEARGALESWHSSPVPSFTDHPYVLSPESSLRPHTGCVSCVVSSFQQELARSLTEKDMGSGDRLETLSTASVEASHVSPLSSVGTDLSELEEPQEFNTLFPSRPVFSFSSRPVGLWKASMDVSPEVDVSGIAITQVYPSHGRLSTPSSLDSTFGFSVTSDLVMSSSMIHLLSSVIPSTHFDSSFSLTANQNSPSFPAGKPSLLTSPSLVPSAQSSAFSHGAPTSSLELQSGSRLDFTSGFYSTPPLDFSTPAPSRSDELAFPSLMSSDPSTFFSQTFSTMAETFSLSNSMNLQSPQLSVLNPTSLEPSQPQSSADLLLNTVTVLPSPPERPPLSSSPSDSLEFTEVSRVSLRESHVHLTSAFSETTSAFEFSPIPHESTISTLVPSSSEPSLGIYAAGTHLTSLPTTVFHLTPILTESSPFSTLTPSDGSVRVTDHHTPVLPTPSSVIPSSTESISDPYLSASSSLVSEVSPSPPPTKPVMGSSLTSTDFPPSTSPELSTSLELSMPSASTAPGDTVDSALNSEPMSQNPQGNSVPPPQPSLGPATTSTLEATVGTPALATAKPPYVCDITVPDVYLITTVLARRAVQEYIITSIKEVLRIHFNRAVELKVYELFTDFTFLVTSGPFVYTAISVINVLINSKLVRGQTPLILSVKPSFLVPDPRFQVQTVLQFVPPSVDTGFCNFTQSIEKGLVTALFEVRKHQGTYNLTVQIVNVTIASSRVAPRRGPVNIIFAVKGSQGFLNGSEVSDLLRNLTVVEFSFYLGYPVLQIAEPFQYPQLNLSQLLKSSWVRTVLLGVVEKQLHNEVFPAEMERKLAQLLSEVPTRRRVWRRATVAAGNSVVQVVNVSRLEGDDNPVQLIYFVENQDGERLSAVKSSDLINKVDLQRAAIILGYRIQGVIAQPVDRVKRPSPESQSNNLWVVVGVVIPVLVVTVIVVILYWKLCRTDKLDFQPDTVANIQQRQKLQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGPVKDHTTPSENGDVPSPKSKLPSKNIRLRGRVSPSDADSTVSEESSERDAGEKAPAAAPENKALRAPQSGAPLPSSGNEQHSSASIFEHVDRVSRTSEASRRVPSKIQLIAMQPIPAPPAQHPVLADRVAETNKINKEIQSALRHKSEIEHHRNKIRLRAKRRGHYEFPVVDDLSSGDTKERHRVYRRAQMQIDKILDPAASVPSVFIEPRKSSRMKRSPKPRRKHQVNGCPADAEKDRLITTDSDGTYKRPPGVHNSAYIGCPSDPDLPADVQTPSSTELGRYPGLPFSASQYIPPQPSIEEARQTMHSLLDDAFALVAPSSQPTNAMGAGTGVPASLPVNSTPSREERRATQWGSFYSPAQTANNPCSRYEDYGMTPPSGPLPSRPSFGPGLLPSSELVPPEPPQPQSSTDAPYAARGIYSEEMPSVARPRPVGGTTGSQIQHLTQVGIASRIGAQPVEIPAGRGSQYGGPGWPVYGEEEAGRREATHMLGHQEYSSSPLFQVPRTSGREPSAPPGNLAHRGLQGPGLGYPTSSTEDLQPGHSSASLIKAIREELLRLSQKQGSVQNFHS", "length": 1940 }, "evidence": [ { "id": "F1SR15", "url": "https://omabrowser.org/oma/group/F1SR15/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HCM3-1", "protein_name": "UPF0606 protein KIAA1549", "gene_name": "KIAA1549", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPGARRRRRGAAMEGKPRAGVALAPGPSGRRPSARCARRRRPGLLLPGLWLLLLARPASCAPDELSPEQHNLSLYSMELVLKKSTGHSAAQVALTETAPGSQHSSPLHVTAPPSATTFDTAFFNQGKQTKSTADPSIFVATYVSVTSKEVAVNDDEMDNFLPDTHWTTPRMVSPIQYITVSPPGLPREALEPMLTPSLPMVSLQDEEVTSGWQNTTRQPAAYAESASHFHTFRSAFRTSEGIVPTPGRNLVLYPTDAYSHLSSRTLPEIVASLTEGVETTLFLSSRSLMPQPLGDGITIPLPSLGEVSQPPEEVWATSADRYTDVTTVLSQSLEETISPRTYPTVTASHAALAFSRTHSPLLSTPLAFASSASPTDVSSNPFLPSDSSKTSELHSNSALPGPVDNTHILSPVSSFRPYTWCAACTVPSPQQVLATSLMEKDVGSGDGAETLCMTVLEESSISLMSSVVADFSEFEEDPQVFNTLFPSRPIVPLSSRSMEISETSVGISAEVDMSSVTTTQVPPAHGRLSVPASLDPTAGSLSVAETQVTPSSVTTAFFSVITSILLDSSFSVIANKNTPSLAVRDPSVFTPYSLVPSVESSLFSDQERSSFSEHKPRGALDFASSFFSTPPLELSGSISSPSEAPASLSLMPSDLSPFTSQSFSPLVETFTLFDSSDLQSSQLSLPSSTNLEFSQLQPSSELPLNTIMLLPSRSEVSPWSSFPSDSLEFVEASTVSLTDSEAHFTSAFIETTSYLESSLISHESAVTALVPPGSESFDILTAGIQATSPLTTVHTTPILTESSLFSTLTPPDDQISALDGHVSVLASFSKAIPTGTVLITDAYLPSGSSFVSEATPFPLPTELTVVGPSLTPTEVPLNTSTEVSTTSTGAATGGPLDSTLMGDAASQSPPESSAAPPLPSLRPVTAFTLEATVDTPTLATAKPPYVCDITVPDAYLITTVLARRAVQEYIITAIKEVLRIHFNRAVELKVYELFTDFTFLVTSGPFVYTAISVINVLINSKLVRDQTPLILSVKPSFLVPESRFQVQTVLQFVPPSVDTGFCNFTQRIEKGLMTALFEVRKHHQGTYNLTVQILNITISSSRVTPRRGPVNIIFAVKSTQGFLNGSEVSELLRNLSVVEFSFYLGYPVLQIAEPFQYPQLNLSQLLKSSWVRTVLLGVMEKQLQNEVFQAEMERKLAQLLSEVSTRRRMWRRATVAAGNSVVQVVNVSRLEGDDNPVQLIYFVEDQDGERLSAVKSSDLINKMDLQRAAIILGYRIQGVIAQPVDRVKRPSPESQSNNLWVIVGVVIPVLVVMVIVVILYWKLCRTDKLDFQPDTVANIQQRQKLQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGPLKDHTTPSENGDVPSPKSKIPSKNVRHRGRVSPSDADSTVSEESSERDAGDKTPGAVNDGRSHRAPQSGPPLPSSGNEQHSSASIFEHVDRISRPPEASRRVPSKIQLIAMQPIPAPPVQRPSPADRVAESNKINKEIQTALRHKSEIEHHRNKIRLRAKRRGHYEFPVVDDLSSGDTKERHRVYRRAQMQIDKILDPTASVPSVFIEPRKSSRIKRSPKPRRKHQVNGCPADAEKDRLITTDSDGTYRRPPGVHNSAYIGCPSDPDLPADVQTPSSVELGRYPALPFPASQYIPPQPSIEEARQTMHSLLDDAFALVAPSSQPASTAGVGPGVPPGLPANSTPSQEERRATQWGSFYSPAQTANNPCSRYEDYGMTPPTGPLPRPGFGPGLLQSTELVPPDPQQPQASAEAPFAARGIYSEEMPSVARPRPVGGTTGSQIQHLTQVGIASRIGAQPVEIPPSRGSQYGGPGWPSYGEDEAGRREATHMLGHQEYSSSPLFQVPRTSGREPSAPSGNLPHRGLQGPGLGYPTSSTEDLQPGHSSASLIKAIREELLRLSQKQSTVQNFHS", "length": 1950 }, "evidence": [ { "id": "F1SR15", "url": "https://omabrowser.org/oma/group/F1SR15/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1005, "end_pos": 1007, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1034, "end_pos": 1036, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1044, "end_pos": 1046, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1071, "end_pos": 1073, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1136, "end_pos": 1138, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1621, "end_pos": 1623, "annotation": "n_glycosylation_sequon" }, { "start_pos": 598, "end_pos": 600, "annotation": "n_glycosylation_sequon" }, { "start_pos": 788, "end_pos": 790, "annotation": "n_glycosylation_sequon" }, { "start_pos": 973, "end_pos": 975, "annotation": "n_glycosylation_sequon" }, { "start_pos": 998, "end_pos": 1000, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 115, 754, 1623 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1005, "end_pos": 1007 }, { "start_pos": 1034, "end_pos": 1036 }, { "start_pos": 1044, "end_pos": 1046 }, { "start_pos": 1071, "end_pos": 1073 }, { "start_pos": 1136, "end_pos": 1138 }, { "start_pos": 1621, "end_pos": 1623 }, { "start_pos": 598, "end_pos": 600 }, { "start_pos": 788, "end_pos": 790 }, { "start_pos": 973, "end_pos": 975 }, { "start_pos": 998, "end_pos": 1000 } ] }, "class_list": [], "section_stats": [ { 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRB7-1", "uniprot_ac": "F1SRB7", "uniprot_id": "F1SRB7_PIG", "mass": { "chemical_mass": 14218.0, "monoisotopic_mass": 14218.0 }, "refseq": {}, "gene_names": [], 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The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell.", "evidence": [ { "database": "UniProtKB", "id": "F1SRB7", "url": "https://www.uniprot.org/uniprotkb/F1SRB7#function" }, { "database": "UniProtKB", "id": "ARBA00034092", "url": "https://www.uniprot.org/uniprotkb/ARBA00034092#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRB7", "url": "https://www.uniprot.org/uniprotkb/F1SRB7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/F1SRB7", "locus": {} } ], "crossref": [ { "id": "F1SRB7", "url": "https://alphafold.ebi.ac.uk/entry/F1SRB7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000000073", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000073", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00463", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00463", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000054", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000054", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023621", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023621", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10956", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10956", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10956:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10956:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01198", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01198", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SRB7", "url": "https://www.uniprot.org/uniprotkb/F1SRB7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRB7-1", "url": "https://www.uniprot.org/uniprotkb/F1SRB7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125, "header": "tr|F1SRB7-1|F1SRB7_PIG Isoform 1 of Large ribosomal subunit protein eL31 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=F1SRB7-1" }, "isoforms": [ { "isoform_ac": "F1SRB7-1", "url": "https://www.uniprot.org/uniprotkb/F1SRB7/entry#F1SRB7-1", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125, "header": "tr|F1SRB7-1|F1SRB7_PIG Isoform 1 of Large ribosomal subunit protein eL31 OS=Sus scrofa OX=9823 GN= PE=3 SV=2 CANONICAL=F1SRB7-1" }, "locus": { "chromosome": "5", "start_pos": 7675193, "end_pos": 7673983, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104028.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104028.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078783.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078783.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRB7", "url": "https://www.uniprot.org/uniprotkb/F1SRB7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3L8Z8-1", "protein_name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "gene_name": "LOC100514982", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "F1SRB7", "url": "https://omabrowser.org/oma/group/F1SRB7/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cytoplasmic translation", "id": "GO:0002181", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002181", "evidence": [ { "database": "UniProtKB", "id": "F1SRB7", "url": "https://www.uniprot.org/uniprotkb/F1SRB7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural constituent of ribosome", "id": "GO:0003735", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003735", "evidence": [ { "database": "UniProtKB", "id": "F1SRB7", "url": "https://www.uniprot.org/uniprotkb/F1SRB7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytosolic large ribosomal subunit", "id": "GO:0022625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022625", "evidence": [ { "database": "UniProtKB", "id": "F1SRB7", "url": "https://www.uniprot.org/uniprotkb/F1SRB7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 64, "end_pos": 66, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SRB7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 125, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SRB7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SRB7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 64, "end_pos": 66 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRE5-1", "uniprot_ac": "F1SRE5", "uniprot_id": "F1SRE5_PIG", "mass": { "chemical_mass": 48111.0, "monoisotopic_mass": 48111.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF662", "type": "recommended", "evidence": [ { "id": "F1SRE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ] } ], "protein_names": [ { "name": "Zinc finger protein 662", "type": "synonym", "evidence": [ { "id": "F1SRE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRE5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" }, { "database": "UniProtKB", "id": "A0A5G2RHY4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RHY4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF662", "url": "https://www.uniprot.org/uniprotkb/F1SRE5", "locus": { "chromosome": "13", "start_pos": 26352548, "end_pos": 26342004, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011292", "url": "https://www.ensembl.org/id/ENSSSCG00000011292" } ] } } ], "crossref": [ { "id": "F1SRE5", "url": "https://alphafold.ebi.ac.uk/entry/F1SRE5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000011292", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011292", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100155776", "url": "https://www.ncbi.nlm.nih.gov/gene/100155776", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2RHY4", "url": "https://www.orthodb.org/?gene=A0A5G2RHY4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14003:SF23", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14003:SF23", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": 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"MLENYAAVASLAAFPFPKPALIFLLERGEAPWSSAPEGPLDGEGPRGISSGPFLKWAGISHLEQVEEPLKQKLQEEGPSLLGTEGVLKNGKGGILKEDIFEKVQDHLVLSSGPQRCGSQEFWFGKTCEEEKSRLGRWPDYPTRGSVGNTTHGILEEVVKDEMMVVEECSEDADIHTHLAHPKSLSEQVFCLCKECGQCFDQNEDFDQHQRIHNGEKVYECKECGKTFSFRSRCIVHQRIHTGVKPYVCQECAKAFVWKSNLIRHQRIHTGEKRFECKECGKRFSQNVSLTQHQRIHTGEKPYTCKKCGKGFTRKPVLLRHQGIHTGEKPYECKDCGKGFMRNSDLAQHQWVHTGERPHGCIDCGKSFICKAHLTRHQRVHTGERPYKCNDCGKAFSQNSVLITHQRRHAREKPYNCQTSHHDH", "length": 423, "header": "tr|F1SRE5-1|F1SRE5_PIG Isoform 1 of Zinc finger protein 662 OS=Sus scrofa OX=9823 GN=ZNF662 PE=3 SV=4 CANONICAL=F1SRE5-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RHY4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRE5/entry#A0A5G2RHY4-1", "sequence": { "sequence": "MGLAAPAEEWTLGLAFAAPWRGAAKSGPFGPGVSLLDPRQLRVGPGARSLPRRVAVALACGTCFGPALQLLPGQSTPAQARLESVTFEDVAIFFSENEWTSLAPAQRALYREVMLENYAAVASLAFPFPKPALIFLLERGEAPWSSAPEGPLDGEGPRGISSEGVLKNGKGGILKEDIFEKVQDHLVLSSGPQRCGSQEFWFGKTCEEEKSRLGRWPDYPTRGSVGNTTHGILEEVVKDEMMVVEECSEDADIHTHLAHPKSLSEQVFCLCKECGQCFDQNEDFDQHQRIHNGEKVYECKECGKTFSFRSRCIVHQRIHTGVKPYVCQECAKAFVWKSNLIRHQRIHTGEKRFECKECGKRFSQNVSLTQHQRIHTGEKPYTCKKCGKGFTRKPVLLRHQGIHTGEKPYECKDCGKGFMRNSDLAQHQWVHTGERPHGCIDCGKSFICKAHLTRHQRVHTGERPYKCNDCGKAFSQNSVLITHQRRHAREKPYNCQTSHHDH", "length": 502, "header": "tr|A0A5G2RHY4-1|A0A5G2RHY4_PIG Computationally mapped isoform of Zinc finger protein 662 OS=Sus scrofa OX=9823 GN=ZNF662 PE=3 SV=1 CANONICAL=F1SRE5-1" }, "locus": { "chromosome": "13", "start_pos": 26350538, "end_pos": 26342036, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083154.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083154.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071062.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071062.1" } ] } }, { "isoform_ac": "F1SRE5-1", "url": "https://www.uniprot.org/uniprotkb/F1SRE5/entry#F1SRE5-1", "sequence": { "sequence": "MLENYAAVASLAAFPFPKPALIFLLERGEAPWSSAPEGPLDGEGPRGISSGPFLKWAGISHLEQVEEPLKQKLQEEGPSLLGTEGVLKNGKGGILKEDIFEKVQDHLVLSSGPQRCGSQEFWFGKTCEEEKSRLGRWPDYPTRGSVGNTTHGILEEVVKDEMMVVEECSEDADIHTHLAHPKSLSEQVFCLCKECGQCFDQNEDFDQHQRIHNGEKVYECKECGKTFSFRSRCIVHQRIHTGVKPYVCQECAKAFVWKSNLIRHQRIHTGEKRFECKECGKRFSQNVSLTQHQRIHTGEKPYTCKKCGKGFTRKPVLLRHQGIHTGEKPYECKDCGKGFMRNSDLAQHQWVHTGERPHGCIDCGKSFICKAHLTRHQRVHTGERPYKCNDCGKAFSQNSVLITHQRRHAREKPYNCQTSHHDH", "length": 423, "header": "tr|F1SRE5-1|F1SRE5_PIG Isoform 1 of Zinc finger protein 662 OS=Sus scrofa OX=9823 GN=ZNF662 PE=3 SV=4 CANONICAL=F1SRE5-1" }, "locus": { "chromosome": "13", "start_pos": 26350538, "end_pos": 26343920, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012362.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012362.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012039.4", "url": "https://www.ensembl.org/id/ENSSSCP00000012039.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "transcription regulator complex", "id": "GO:0005667", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005667", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "PcG protein complex", "id": "GO:0031519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031519", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SRE5", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 148, "end_pos": 150, "annotation": "n_glycosylation_sequon" }, { "start_pos": 286, "end_pos": 288, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SRE5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 423, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SRE5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SRE5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRE5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRE5" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRE7-1", "uniprot_ac": "F1SRE7", "uniprot_id": "F1SRE7_PIG", "mass": { "chemical_mass": 10209.0, "monoisotopic_mass": 10209.0 }, "refseq": { "ac": "XP_003132188", "name": "HIG1 domain family member 1A, mitochondrial", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132188" }, "gene_names": [ { "name": "HIGD1A", "type": "recommended", "evidence": [ { "id": "F1SRE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ] }, { "name": "HIGD1A", "type": "synonym", "evidence": [ { "id": "XP_003132188", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132188" } ] } ], "protein_names": [ { "name": "HIG1 domain family member 1A, mitochondrial", "type": "synonym", "evidence": [ { "id": "XP_003132188", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132188" } ] }, { "name": "HIG1 hypoxia inducible domain family 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"https://www.ensembl.org/id/ENSSSCP00000012037.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRE7", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524219", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524219", "resource": "KEGG Pathway" }, { "id": "R-SSC-9864848", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9864848", "resource": "Reactome", "description": "Complex IV assembly" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MTT5-1", "protein_name": "HIG1 domain family member 1A, mitochondrial", "gene_name": "Higd1a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSTDTDLSLSSYDEGQGSKFIRKTKETPFVPIGMAGFAAIVAYGLYKLKNRGNTKMSIHLIHMRVAAQGFVVGALTLGMGYSMYKEFWAKPKP", "length": 93 }, "evidence": [ { "id": "F1SRE7", "url": "https://omabrowser.org/oma/group/F1SRE7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SRE7", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ], "pmid": "" }, { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F1SRE7", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "F1SRE7", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ], "pmid": "" }, { "name": "protein-containing complex", "id": "GO:0032991", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032991", "evidence": [ { "database": "UniProtKB", "id": "F1SRE7", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of apoptotic process", "id": "GO:0043066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043066", "evidence": [ { "database": "UniProtKB", "id": "F1SRE7", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ], "pmid": "" }, { "name": "mitochondrial respirasome assembly", "id": "GO:0097250", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097250", "evidence": [ { "database": "UniProtKB", "id": "F1SRE7", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRE7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRE7" }, { "id": "PS51503", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51503" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "HIG1", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRF0-1", "uniprot_ac": "F1SRF0", "uniprot_id": "F1SRF0_PIG", "mass": { "chemical_mass": 56693.0, "monoisotopic_mass": 56693.0 }, "refseq": { "ac": "XP_005669478", "name": "protein-cysteine N-palmitoyltransferase HHAT-like protein isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669478" }, "gene_names": [ { "name": "HHATL", "type": "recommended", "evidence": [ { "id": "F1SRF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ] }, { "name": "HHATL", "type": "synonym", "evidence": [ { "id": "XP_005669478", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669478" } ] } ], "protein_names": [ { "name": "Hedgehog acyltransferase like", "type": "synonym", "evidence": [ { "id": "F1SRF0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRF0/entry#names_and_taxonomy" } ] }, { "name": "protein-cysteine N-palmitoyltransferase HHAT-like protein isoform X3", "type": "synonym", "evidence": [ { "id": "XP_005669478", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669478" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HHATL", "url": "https://www.uniprot.org/uniprotkb/F1SRF0", "locus": { "chromosome": "13", "start_pos": 26206867, "end_pos": 26222499, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000011287", "url": "https://www.ensembl.org/id/ENSSSCG00000011287" } ] } } ], "crossref": [ { "id": "ENSSSCG00000011287", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000011287", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100523865", "url": "https://www.ncbi.nlm.nih.gov/gene/100523865", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004299", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004299", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051085", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051085", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HRAVMYM", "url": "https://omabrowser.org/oma/group/HRAVMYM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13285", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13285", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13285:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13285:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03062", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03062", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005669478", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005669478", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287A0H7", "url": "https://www.uniprot.org/uniprotkb/A0A287A0H7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0H7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0H7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRF0-1", "url": "https://www.uniprot.org/uniprotkb/F1SRF0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGIKTALPAAEVGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDVADFEWVMWFTSFRNVIVFALSGHVLFAKLCTMVAPQLRSWMYAVYGALAVVGTMGPWYLLLLLGHCVGLYMVSLLGQPWLCLGLGLASLASFKLDPLISWQSGFVTGTFDLQEVLFHGGSGFTVLRCTSFALESCAHPDRRYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQVEPVRREGELWRIRAQAGLSVVAIVAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYSNLVYDWVKAAVLFGVVNTVARLDHLDPPQPPKCITALYVFAETHFDRGINDWLCKYVYDHIGGEHSSVIPELGATVATFAITTLWLGPCDIVYLWSCLNCFGLNFELWVQKLAEWGPLAHIEASLSEQMSRRVRAIFGAMNFWAIIMYNLVSLNSREFTELVAQRLLLRGFPQTTLAVLFVTYCGVQLVKERERTLALEEEQKQDKEKPE", "length": 504, "header": "tr|F1SRF0-1|F1SRF0_PIG Isoform 1 of Hedgehog acyltransferase like OS=Sus scrofa OX=9823 GN=HHATL PE=1 SV=1 CANONICAL=F1SRF0-1" }, "isoforms": [ { "isoform_ac": "A0A287A0H7-1", "url": "https://www.uniprot.org/uniprotkb/F1SRF0/entry#A0A287A0H7-1", "sequence": { "sequence": "MSGVSTTSVGDHELDQAGQGGSSALTQSVSLSSIQAMGIKTALPAAEVGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDVADFEWVMWFTSFRNVIVFALSGHVLFAKLCTMVAPQLRSWMYAVYGALAVVGTMGPWYLLLLLGHCVGLYMVSLLGQPWLCLGLGLASLASFKLDPLISWQSGFVTGTFDLQEVLFHGGSGFTVLRCTSFALESCAHPDRRYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQVEPVRREGELWRIRAQAGLSVVAIVAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYSNLVYDWVKAAVLFGVVNTVARLDHLDPPQPPKCITALYVFAETHFDRGINDWLCKYVYDHIGGEHSSVIPELGATVATFAITTLWLGPCDIVYLWSCLNCFGLNFELWVQKLAEWGPLAHIEASLSEQMSRRVRAIFGAMNFWAIIMYNLVSLNSREFTELVAQRLLLRGFPQTTLAVLFVTYCGVQLVKERERTLALEEEQKQDKEKPE", "length": 540, "header": "tr|A0A287A0H7-1|A0A287A0H7_PIG Computationally mapped isoform of Hedgehog acyltransferase like OS=Sus scrofa OX=9823 GN=HHATL PE=1 SV=1 CANONICAL=F1SRF0-1" }, "locus": { "chromosome": "13", "start_pos": 26217304, "end_pos": 26209504, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063444.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063444.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037249.1", "url": "https://www.ensembl.org/id/ENSSSCP00000037249.1" } ] } }, { "isoform_ac": "F1SRF0-1", "url": "https://www.uniprot.org/uniprotkb/F1SRF0/entry#F1SRF0-1", "sequence": { "sequence": "MGIKTALPAAEVGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDVADFEWVMWFTSFRNVIVFALSGHVLFAKLCTMVAPQLRSWMYAVYGALAVVGTMGPWYLLLLLGHCVGLYMVSLLGQPWLCLGLGLASLASFKLDPLISWQSGFVTGTFDLQEVLFHGGSGFTVLRCTSFALESCAHPDRRYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQVEPVRREGELWRIRAQAGLSVVAIVAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYSNLVYDWVKAAVLFGVVNTVARLDHLDPPQPPKCITALYVFAETHFDRGINDWLCKYVYDHIGGEHSSVIPELGATVATFAITTLWLGPCDIVYLWSCLNCFGLNFELWVQKLAEWGPLAHIEASLSEQMSRRVRAIFGAMNFWAIIMYNLVSLNSREFTELVAQRLLLRGFPQTTLAVLFVTYCGVQLVKERERTLALEEEQKQDKEKPE", "length": 504, "header": "tr|F1SRF0-1|F1SRF0_PIG Isoform 1 of Hedgehog acyltransferase like OS=Sus scrofa OX=9823 GN=HHATL PE=1 SV=1 CANONICAL=F1SRF0-1" }, "locus": { "chromosome": "13", "start_pos": 26217196, "end_pos": 26209504, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012357.4", "url": "https://www.ensembl.org/id/ENSSSCT00000012357.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012034.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012034.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1ABQ8-1", "protein_name": "Hedgehog acyltransferase-like", "gene_name": "HHATL", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGVKAMLPSHELGFYALVVTCAVLYSSSGIFEASRDSMNRKAFRDGIKPGWHYFGRKMDVADFEWVMWFTSFRNVIIFTLSGHVLFAKVCSMTVPQHRAVVYMLYGMLAVLGSMGLAYLMIILSHCLILYSVALSKQKWLCYVAGLCCLASIKLEPFSSWQSGFVTGAFDLQDVLFYGGSGFTIMRCMSFALESSERQEGIFSIFDLLKYNFYLPFFFFGPVMTFDQFHSQVSTRDLRRKEDEMRNIRVHALLHVGAIIAVDIFFHFFYILTLPSDLKFVNRLSDWALAGLAYSNLVYDWVKAAVMFGVINTIARLDHLDPPQPPKCITMLYVFAETHFDRGINDWLCKYVYDHIGENHDNVMKELMATIATFAVTTLWLGPCEIVYIWSVFNCFGLNFELWVQKFFQWEPLSKLEAKMSEATSRRIRAVFGAANFWAIVLYNILALNSLEFALLVTRRLLVTGFPVSTLSIWFITYCGVQLIKERERILAMEEEKSDKPKAE", "length": 503 }, "evidence": [ { "id": "F1SRF0", "url": "https://omabrowser.org/oma/group/F1SRF0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D4A9P9-1", "protein_name": "Hedgehog acyltransferase-like", "gene_name": "Hhatl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGIKTALPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYLGRKMDVADFEWVMWFTNFRNIIVFALSGHVLFAKLCTMVAPQLRSWMYAVYGVLAVVGTMGPWYLLLLLGHCVVLYVASLLGQRWLCLALGLASLASFKMDPGISWQSGFVTGTFDLQDVLFHGGSGFTVLRCTSFALESCAHPDRRYSLADLLKYNFYLPFFFFGPIMTFDRFQAQVSQEPVRPEGELWRIQTQAGLSAAAIVAVDIFFHFFYILTIPSDLKFASRLPDSALAGLAYSNLVYDWVKAAVLFGVVNTVARLDHLDPPQPPKCITALYVFGETHFDRGINDWLCKYVYDHIGGDHSAVIPELAASVATFVITTLWLGPCDIVYLWSVLNCFGLNFELWAQKLAEHGPLAQIEARLSEQMSRRVRALCGAVNFWAIIMYNLVSLNSLEFTELVARRLILTGFPQTTLAVLFVTYCGVQLVKERERSLALEEEQRQDKEKLE", "length": 503 }, "evidence": [ { "id": "F1SRF0", "url": "https://omabrowser.org/oma/group/F1SRF0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9D1G3-1", "protein_name": "Protein-cysteine N-palmitoyltransferase HHAT-like protein", "gene_name": "Hhatl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGIKTALPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYLGRKMDVADFEWVMWFTNFRNVIVFALSGHVLFAKLCTMVAPQLRSWMYAVYGVLAVVGTMGPWYLLLLLGHCMVLYVASLLGQRWLCLALGLASLASFKVDPGISWQSGFVTGTFDLQDVLFHGGSSFTVLRCTSFALESCAHPDRRYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQEPVRPEGELWHIQAQAGLSAAAIVAVDVFFHFFYILTIPSDLKFASRLPDSALAGLAYSNLVYDWVKAAVLFGVVNTVARLDHLDPPQPPKCITALYVFGETHFDRGINDWLCKYVYDHIGGDHSTVIPELAASVATFVVTTLWLGPCDIVYLWSVLNCFGLNFELWVQKLAERGPLAQIEARLSEQMSRRVRALCGAVNFWAIIMYNLVSLNSLEFTELVARRLILTGFPQTTLAVLFVTYCGVQLVKERERSLALEEEQRQDREKLE", "length": 503 }, "evidence": [ { "id": "F1SRF0", "url": "https://omabrowser.org/oma/group/F1SRF0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9HCP6-1", "protein_name": "Protein-cysteine N-palmitoyltransferase HHAT-like protein", "gene_name": "HHATL", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGIKTALPAAELGLYSLVLSGALAYAGRGLLEASQDGAHRKAFRESVRPGWEYIGRKMDVADFEWVMWFTSFRNVIIFALSGHVLFAKLCTMVAPKLRSWMYAVYGALAVMGTMGPWYLLLLLGHCVGLYVASLLGQPWLCLGLGLASLASFKMDPLISWQSGFVTGTFDLQEVLFHGGSSFTVLRCTSFALESCAHPDRHYSLADLLKYNFYLPFFFFGPIMTFDRFHAQVSQVEPVRREGELWHIRAQAGLSVVAIMAVDIFFHFFYILTIPSDLKFANRLPDSALAGLAYSNLVYDWVKAAVLFGVVNTVACLDHLDPPQPPKCITALYVFAETHFDRGINDWLCKYVYNHIGGEHSAVIPELAATVATFAITTLWLGPCDIVYLWSFLNCFGLNFELWMQKLAEWGPLARIEASLSVQMSRRVRALFGAMNFWAIIMYNLVSLNSLKFTELVARRLLLTGFPQTTLSILFVTYCGVQLVKERERTLALEEEQKQDKEKPE", "length": 504 }, "evidence": [ { "id": "F1SRF0", "url": "https://omabrowser.org/oma/group/F1SRF0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048471", "evidence": [ { "database": "UniProtKB", "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transferase activity", "id": "GO:0016740", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016740", "evidence": [ { "database": "UniProtKB", "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of protein modification process", "id": "GO:0031399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031399", "evidence": [ { "database": "UniProtKB", "id": "F1SRF0", "url": "https://www.uniprot.org/uniprotkb/F1SRF0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRF4", "url": "https://www.uniprot.org/uniprotkb/F1SRF4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SS18L2", "url": "https://www.uniprot.org/uniprotkb/F1SRF4", "locus": { "chromosome": "13", "start_pos": 26112759, "end_pos": 26108434, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000055190", "url": "https://www.ensembl.org/id/ENSSSCG00000055190" } ] } } ], "crossref": [ { "id": "ENSSSCG00000027711", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027711", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100523140", "url": "https://www.ncbi.nlm.nih.gov/gene/100523140", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007726", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007726", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100523140", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523140", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AECVQHQ", "url": "https://omabrowser.org/oma/group/AECVQHQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRF4", "url": "https://www.orthodb.org/?gene=F1SRF4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PF05030", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05030", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003132181", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132181", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SRF4", "url": "https://www.uniprot.org/uniprotkb/F1SRF4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRF4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRF4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSVAFVPDSLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADANPTSVSKAME", "length": 77, "header": "tr|F1SRF4-1|F1SRF4_PIG Isoform 1 of SS18 like 2 OS=Sus scrofa OX=9823 GN=SS18L2 PE=3 SV=1 CANONICAL=F1SRF4-1" }, "isoforms": [ { "isoform_ac": "F1SRF4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRF4/entry#F1SRF4-1", "sequence": { "sequence": "MSVAFVPDSLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADANPTSVSKAME", "length": 77, "header": "tr|F1SRF4-1|F1SRF4_PIG Isoform 1 of SS18 like 2 OS=Sus scrofa OX=9823 GN=SS18L2 PE=3 SV=1 CANONICAL=F1SRF4-1" }, "locus": { "chromosome": "13", "start_pos": 26111695, "end_pos": 26108530, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099750.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099750.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077972.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077972.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRF4", "url": "https://www.uniprot.org/uniprotkb/F1SRF4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523140", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523140", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y9Y7-1", "protein_name": "SS18 like 2", "gene_name": "SS18L2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSVVFVPERLRGKAEVNQETLQRLLEENDQLIRCIVEYQSKGRATDCVQSFKIQNVQFQFRSISYSQKHCNKAATRSGPENMENKLSPLAEEVSSLELAESP", "length": 102 }, "evidence": [ { "id": "F1SRF4", "url": "https://omabrowser.org/oma/group/F1SRF4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H987-1", "protein_name": "SS18-like protein 2", "gene_name": "Ss18l2", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSVIFAPDWLRGKAKVNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADANTSSLTKAVE", "length": 77 }, "evidence": [ { "id": "F1SRF4", "url": "https://omabrowser.org/oma/group/F1SRF4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9D174-1", "protein_name": "SS18-like protein 2", "gene_name": "Ss18l2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVIFAPDWLRGKAKVNQETIQRLLEENDQLIRCIVEYQNKGRANECVQYQHVLHRNLIYLATIADANTSSLTKAVE", "length": 77 }, "evidence": [ { "id": "F1SRF4", "url": "https://omabrowser.org/oma/group/F1SRF4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UHA2-1", "protein_name": "SS18-like protein 2", "gene_name": "SS18L2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSVAFVPDWLRGKAEVNQETIQRLLEENDQLIRCIVEYQNKGRGNECVQYQHVLHRNLIYLATIADASPTSTSKAME", "length": 77 }, "evidence": [ { "id": "F1SRF4", "url": "https://omabrowser.org/oma/group/F1SRF4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"url": "https://www.uniprot.org/uniprotkb/F1SRI2/entry#F1SRI2-1", "sequence": { "sequence": "MSDKNQVAAKAALIEQLMSKRNFEDLGNHLTELETLRVTKELLQETVVVRAVYRVLKHCPTAALKKKAKCLLSKWKALYKDAQVKAKGSPKLSPAGRQKEEHQRLSPNPSQDAARGSSSSHSPQPSQDVAGAPEMNMPENSPGAGEPEAAHLRAGDPKSTDQSSGELRDPTRPVRAKCTELLYEALAAFSTEQPRADLWHRFAQEIEECIFTLHAKNLKKYKTCIRSKIANLKNPRNSHLRENLLSGIMSPRAFAEMTVMDMASKELKQLRASYTESCIQEHSLPQGVEGTPTKKVRCRRCEKFNCQVTVIARGALFLPSWVRNAKPDEELMTYVICKECGEQWYHSKWVCL", "length": 352, "header": "tr|F1SRI2-1|F1SRI2_PIG Isoform 1 of Transcription elongation factor A N-terminal and central domain containing OS=Sus scrofa OX=9823 GN=TCEANC PE=4 SV=2 CANONICAL=F1SRI2-1" }, "locus": { "chromosome": "X", "start_pos": 10312000, "end_pos": 10310945, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000013261.4", "url": "https://www.ensembl.org/id/ENSSSCT00000013261.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012905.2", "url": "https://www.ensembl.org/id/ENSSSCP00000012905.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRI2", "url": "https://www.uniprot.org/uniprotkb/F1SRI2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": 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"id": "IPR051942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CPAYVPL", "url": "https://omabrowser.org/oma/group/CPAYVPL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRP8", "url": "https://www.orthodb.org/?gene=F1SRP8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15288", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15288", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15288:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15288:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02141", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02141", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03455", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03455", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF03456", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03456", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-8876198", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005654327", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005654327", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZVQ4", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZVQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZVQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FP68", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FP68-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FP68-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRP8", "url": "https://www.uniprot.org/uniprotkb/F1SRP8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRP8-1", "url": "https://www.uniprot.org/uniprotkb/F1SRP8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MISSNMIISDPGSDLSAKGTSRAGKRQHSGVQNPCPPARGGARHKSLSIKDKISEWEGKRESPAPAPGRKTDGQEDYLPSCVMERRGSEGARTRAREAQNGTRLGPESKEDARNKGAAEVRAWDAEGRQDPSQPARELAPRAARGREPSLSKQRFQNDSLSVLNQVKKLEQALKDGSAGLDPQLPGTCYSPHCLPDKAEEGHPLPEPRGSGSVSEVRAHPLDLEAREAAPEAAEQRKGSCGRPCDPSLESGYREDSPSKPFINPLPKPRRTFKHDGEGDKDGNPGISFRKDKRNLPPLPSLPPPPLPSSPPPSSVNRRLWNGRPKPSADHRKSYEFEDLLQSSCENSMVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDVELHGRCLGKKCVLNFPSSPTSSIPDTPAKQSLSKPAFFRQNSERRNFKLLDTRKLSRDGTGSPSRVSPPSTPSSPDDTFFNLGDPQNGRKKRKIPKLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLDRELVEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLERSFKFMREAEDQLKAIPQFCFPDAKDWTPVQQFTSETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTIVVKNFLPGSGTEVIELCRPLDSRLEHVDLESLFSSLSVRHLLCVFASLLLERRVIFIADKLSTLSKCCHAMVAVIYPFTWQHTYIPVLPPAMVDIVCSPTPFLIGLLTSSLPLLRELPLEEVLVVDLANNRFLRQMDDEDSILPRKLQVALEHILEQRNDLASEQDAGPPDCKRGPEPSPLNEVVSEAFVRFFVEIVGHYSLFLTAGDREERSLQREAFRKAVSSKSVRRFLEVFMETQMFRGFIQERELRRQDPKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGNKMKFLHKK", "length": 1008, "header": "tr|F1SRP8-1|F1SRP8_PIG Isoform 1 of DENN domain containing 2A OS=Sus scrofa OX=9823 GN=DENND2A PE=4 SV=4 CANONICAL=F1SRP8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZVQ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRP8/entry#A0A286ZVQ4-1", "sequence": { "sequence": "MMTVCRPAKGNHSQTENLGYKLADKVKVEGPKAGEDPQRQPLKSSIPFLETDQHLSFRRSPLESLLNSVPESSVDCLQQNMISSNMIISDPGSDLSAKGTSRAGKRQHSGVQNPCPPARGGARHKSLSIKDKISEWEGKRESPAPAPGRKTDGQEDYLPSCVMERRGSEGARTRAREAQNGTRLGPESKEDARNKGAAEVRAWDAEGRQDPSQPARELAPRAARGREPSLSKQRFQNDSLSVLNQVKKLEQALKDGSAGLDPQLPGTCYSPHCLPDKAEEGHPLPEPRGSGSVSEVRAHPLDLEAREAAPEAAEQRKGSCGRPCDPSLESGYREDSPSKPFINPLPKPRRTFKHDGEGDKDGNPGISFRKDKRNLPPLPSLPPPPLPSSPPPSSVNRRLWNGRPKPSADHRKSYEFEDLLQSSCENSMVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDVELHGRCLGKKCVLNFPSSPTSSIPDTPAKQSLSKPAFFRQNSERRNFKLLDTRKLSRDGTGSPSRVSPPSTPSSPDDTFFNLGDPQNGRKKRKIPKLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLDRELVEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTIVVKNFLPGSGTEVIELCRPLDSRLEHVDLESLFSSLSVRHLLCVFASLLLERRVIFIADKLRYQVRLLLLKCLSGSHTIW", "length": 836, "header": "tr|A0A286ZVQ4-1|A0A286ZVQ4_PIG Computationally mapped isoform of DENN domain containing 2A OS=Sus scrofa OX=9823 GN=DENND2A PE=4 SV=2 CANONICAL=F1SRP8-1" }, "locus": { "chromosome": "18", "start_pos": 9282612, "end_pos": 9221491, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045857.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045857.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035538.2", "url": "https://www.ensembl.org/id/ENSSSCP00000035538.2" } ] } }, { "isoform_ac": "A0A8W4FP68-1", "url": "https://www.uniprot.org/uniprotkb/F1SRP8/entry#A0A8W4FP68-1", "sequence": { "sequence": "VDCLQQNMISSNMIISDPGSDLSAKGTSRAGKRQHSGVQNPCPPARGGARHKSLSIKDKISEWEGKRESPAPAPGRKTDGQEDYLPSCVMERRGSEGARTRAREAQNGTRLGPESKEDARNKGAAEVRAWDAEGRQDPSQPARELAPRAARGREPSLSKQRFQNDSLSVLNQVKKLEQALKDGSAGLDPQLPGTCYSPHCLPDKAEEGHPLPEPRGSGSVSEVRAHPLDLEAREAAPEAAEQRKGSCGRPCDPSLESGYREDSPSKPFINPLPKPRRTFKHDGEGDKDGNPGISFRKDKRNLPPLPSLPPPPLPSSPPPSSVNRRLWNGRPKPSADHRKSYEFEDLLQSSCENSMVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDVELHGRCLGKKCVLNFPSSPTSSIPDTPAKQSLSKPAFFRQNSERRNFKLLDTRKLSRDGTGSPSRVSPPSTPSSPDDTFFNLGDPQNGRKKRKIPKLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLDRELVEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTIVVKNFLPGSGTEVIELCRPLDSRLEHVDLESLFSSLSVRHLLCVFASLLLERRVIFIADKLSTLSKCCHAMVAVIYPFTWQHTYIPVLPPAMVDIVCSPTPFLIGLLTSSLPLLRELPLEEVLVVDLANNRFLRQMDDEDSILPRKLQVALEHILEQRNDLASEQDAGPPDCKRGPEPSPLNEVVSEAFVRFFVEIVGHYSLFLTAGDREERSLQREAFRKAVSSKSVRRFLEVFMETQMFRGFIQERELRRQDPKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGNKMKFLHKK", "length": 978, "header": "tr|A0A8W4FP68-1|A0A8W4FP68_PIG Computationally mapped isoform of DENN domain containing 2A OS=Sus scrofa OX=9823 GN=DENND2A PE=4 SV=1 CANONICAL=F1SRP8-1" }, "locus": { "chromosome": "18", "start_pos": 9307746, "end_pos": 9224993, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099990.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099990.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081160.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081160.1" } ] } }, { "isoform_ac": "F1SRP8-1", "url": "https://www.uniprot.org/uniprotkb/F1SRP8/entry#F1SRP8-1", "sequence": { "sequence": "MISSNMIISDPGSDLSAKGTSRAGKRQHSGVQNPCPPARGGARHKSLSIKDKISEWEGKRESPAPAPGRKTDGQEDYLPSCVMERRGSEGARTRAREAQNGTRLGPESKEDARNKGAAEVRAWDAEGRQDPSQPARELAPRAARGREPSLSKQRFQNDSLSVLNQVKKLEQALKDGSAGLDPQLPGTCYSPHCLPDKAEEGHPLPEPRGSGSVSEVRAHPLDLEAREAAPEAAEQRKGSCGRPCDPSLESGYREDSPSKPFINPLPKPRRTFKHDGEGDKDGNPGISFRKDKRNLPPLPSLPPPPLPSSPPPSSVNRRLWNGRPKPSADHRKSYEFEDLLQSSCENSMVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDVELHGRCLGKKCVLNFPSSPTSSIPDTPAKQSLSKPAFFRQNSERRNFKLLDTRKLSRDGTGSPSRVSPPSTPSSPDDTFFNLGDPQNGRKKRKIPKLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLDRELVEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLERSFKFMREAEDQLKAIPQFCFPDAKDWTPVQQFTSETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTIVVKNFLPGSGTEVIELCRPLDSRLEHVDLESLFSSLSVRHLLCVFASLLLERRVIFIADKLSTLSKCCHAMVAVIYPFTWQHTYIPVLPPAMVDIVCSPTPFLIGLLTSSLPLLRELPLEEVLVVDLANNRFLRQMDDEDSILPRKLQVALEHILEQRNDLASEQDAGPPDCKRGPEPSPLNEVVSEAFVRFFVEIVGHYSLFLTAGDREERSLQREAFRKAVSSKSVRRFLEVFMETQMFRGFIQERELRRQDPKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGNKMKFLHKK", "length": 1008, "header": "tr|F1SRP8-1|F1SRP8_PIG Isoform 1 of DENN domain containing 2A OS=Sus scrofa OX=9823 GN=DENND2A PE=4 SV=4 CANONICAL=F1SRP8-1" }, "locus": { "chromosome": "18", "start_pos": 9307746, "end_pos": 9225014, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017961.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017961.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017479.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017479.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 456, "start_aa": "Thr", "end_pos": 456, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr456", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRP8", "url": "https://www.uniprot.org/uniprotkb/F1SRP8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8876198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "resource": "Reactome", "description": "RAB GEFs exchange GTP for GDP on RABs" } ], "orthologs": [ { "uniprot_canonical_ac": "A0ABK0LYI0-1", "protein_name": "DENN domain containing 2A", "gene_name": "Dennd2a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGREEGAHVTADGRGAAQGRGRGRARQRPEGTQRASQAGGSGDRTRARAAGTRGAPGGRGRPRGQRRGGQRAMAPQVPAAPAPGNRELRPRTRGAASRGEAALGTLPRSPGDRRGERSIVLPRIGLTLGPKKLAESGQSRALRCAGAPGRLVKAEVAKPREASRRQLLGRSVSLQKTNPAPPLGRSPSSPHTLMLEARVDMLSSNMIISGPAADLGAKEASRPLKKQLSSVQNPGPSTQARAQPLSIKDKISKWEGKKEPPASDPARQTDGQEDYLPSCRVERRGSELTRTKNGMRLETESLQNDSRTRTMCQDAERLPGLRQIDGQPEPSQPRGRELKPSDLRFQSDHLSVLRQVKRLEKALKDGSAGLDPQLPGTCYSPHCLPDKTEEDQPIPESHESGVSLASGRRAHHSEVREPGPEISEEWKGQENVYRGSRWHPQKPFINPVPKPRRTFKHAGEGDKDGNPGISFKKEKRNLPPLPSLPPPPPPLPSSPPPTSVNRRLWTGRQRPSADHRKSYEFEDLLQSSSENSRVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDVESHGRCLGKKCVLTFPGSPTSSIPDTSTKQSLSKSAFFRQNSERRNFKLLDTRKLSRDGTGSPLRTSPPSTPSSPDDTFFNLGDLQNGRKKKKIPKLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYSSLDRDLIEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLEKSFKFLREAEDQLKAIPQFCFPDAKDWSPVQEFTSETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTITVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLVSVFASLLLERRVIFIADKLSTLSKCCHAMVALIYPFSWQHTYIPVLPPAMIDIVCSPTPFLIGLLSSSLPLLRELPLEEVLVVDLINDRFLRQMEDEDSILPRKLQVALEHILEQRNDLACDQDGGPLDCVHGPESSSLSEVVSEAFVRFFVEIVGHYSLFLTSGEERSLQREAFRKAVSSKSLRRFLEVFMETQTFRGFIQERELRRQDAKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGNKMKFLHKK", "length": 1191 }, "evidence": [ { "id": "F1SRP8", "url": "https://omabrowser.org/oma/group/F1SRP8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1B8H4-1", "protein_name": "DENN domain containing 2A", "gene_name": "DENND2A", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLEPRVDCFQQNMFSSDMIINDSASDLSAKGTSRAGKRQLGSVQDPCPPAQGKARHKSLSIKDKISEWEGKRELPTPAPGRKADGQEGYLMSCVTERRSSDGSRARVTEAQNGTRLDVESREDERDKVKVRAQDAEQRPDLSQPAREPAPSLGRGREPRLGKQRFQNDSLSVLKQVKKLEQALKDGSAGLDPQLPGTCYSPHCLPDKAEEAPTLPEHRGGGGGSEFRAHRLDLETREPTLEAAEERKGLCRRPCDQSLESVYRGLEDPPTKPFINPLPKPRRTFKHDGEGDKDGNLGTRFRKDRRNLPPLPSLPPPPLPSSPPPPSVNRRLWSGRPKASADHRKSYEFEDLLQSSSENSRVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDVELHGRCLGKKCVLNFPGSPTSSIPDTPAKQSLSKPAFFRQNSERRNFKLLDTRKLSRDGTGSPSKISPPSTPSSPDDTFFNLGDLQNGRKKRKIPKLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLDRELVEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLERSFKFMREAEDQLKAIPQFCFPDAKDWTPVQQFTSETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTIVVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLLCVFASLLLERRIIFIADKLSTLSTCCHAMVAAIYPFTWQHTYIPVLPPAMIDIVCSPTPFLIGLLTSSLPLLRELPLEEVLVVDLVNNRFLRQMDDEDSILPRKLQVALEHILEQRNDLASEQDDGPPDGKRGPESSPLNEVVSEAFVRFFVEIVGHYSLFLTAGEREERTLQLQREAFRKAVSSKSLRRFLEVFMETQTFRGFIQERELRRQDAKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGNKMKFLHKK", "length": 1022 }, "evidence": [ { "id": "F1SRP8", "url": "https://omabrowser.org/oma/group/F1SRP8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HGJ8-1", "protein_name": "DENN domain-containing protein 2A isoform X1", "gene_name": "Dennd2a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLEARVDMLASNMLISGPAADLGAKEASRPSKKQLGSVQNTGLSARVRAQPQPLSIKDKISKWEGKKEPPAPEPARQTDGQENYLPPCGVETRGGEVTRTKNGMRLETESLGNDSRKTARSVCQDTGRWPVPQQSNGQPESSQHRGLELKPSDLRFQSDHLSVLKQVKRLEKALKDGSAGLDPQLPGTCYSPHCLPDKTEEDQPTPESHGNGGALAAGRRAHHLEGNEPGPEVSEDWKGQESVYRGSRRCPPKPFINPLPKPRRTFKHAGEGDKDASLGMNFRKEKRTLPPLPSLPPPSPPPPPPLPSSPPPTSVNRRLWTGRQRPSADHRKSYEFEDLLQSSSENSRVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDIELHGRCLGKKCVLTFPGSPASSIPDTSTKQSLAKSAFFRQNSERRNFKLLDTRKLSRDGTGSPVRASPPSTPSSPDDTFFNLGDLQNGRKKKKIPRLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDDNSESDSDTEEKLKAHSRRLVNVKSRLKQAPRYSSLDRDLIEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLEKSFKFMREAEDQLKAIPQFCFPDAKDWAPVQEFTSETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTIIVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLVSVFASLLLERRVIFIADKLSTLSKCCHAMVALIYPFSWQHTYIPVLPPAMIDIVCSPTPFLIGLLSSSLPLLRELPLEEVLVVDLINDRFLRQMEDEDSILPRKLQVALEHILEQRNDLACDQDGGPLDCVHGPESSPLNEVVSEAFVRFFVEIVGHYPLFLTSGEERSLQREAFRKAVSSKSLRRFLEVFMETQTFRGFIQERELRRQDAKGLFEVRAQEYLGTLPIGEHSGVNKFLKGLGNKMKFLHKK", "length": 1006 }, "evidence": [ { "id": "F1SRP8", "url": "https://omabrowser.org/oma/group/F1SRP8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8C4S8-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "Dennd2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLEARVDMLSSNMIISGPAADLGAKEASRPWKKQLNSVPNSGPSARARAQPQPLSIKDKISKWEGKKEPPASDPARQTDGQEDHLPSCKVERRGSELTRTKNGMRLETERLQNDSRARTVCQDTEQLPGPRPIDGQPELSQHRGRELKPSDLRFQSDHLSVLRQVKRLEKALKDGSAGLDPQMPGTCYSPHCLPDKTEEDLPSLESHEKGGVLAAGRRAHHLEVREPGPEISEDWKGQESVYRGSRWYPPKPFINPVPKPRRTFKHAGEGDKDVSPGISFKKEKRNLPPLPSLPPPPPPLPSSPPPTSVNRRLWTGRQRPSADHRKSYEFEDLLQSSSENSRVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDVELHGRCLGKKCVLTFPASPTSSIPDTSTKQSLSKSAFFRQNSERRNLKLLDTRKLSRDGAGSPLRTSPPSTPSSPDDTFFNLGDLQNGRKKKKIPRLVLRINAIYEARRGKKRVKRLSQSTESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYSSLDRDLIEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLEKSFKFMREAEDQLKAIPQFCFPDAKDWAPVQEFTSETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSKILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTIIVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLVSVFASLLLERRVIFIADKLSTLSKCCHAMVALIYPFSWQHTYIPVLPPAMIDIVCSPTPFLIGLLSSSLPLLRELPLEEVLVVDLINDRFLRQMEDEDSILPRKLQVALEHILEQRNDLACDQDGGPLDCVHGPESSSLSEVVSEAFVRFFVEIVGHYPLFLTSGEERSLQREAFRKAVSSKSLRRFLEVFMETQTFRGFIQERELRRQDAKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGNKMKFLHKK", "length": 1000 }, "evidence": [ { "id": "F1SRP8", "url": "https://omabrowser.org/oma/group/F1SRP8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9ULE3-1", "protein_name": "DENN domain-containing protein 2A", "gene_name": "DENND2A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDMFSLDMIISDPAAEASRAGKKQLRGVQNPCPSARARPRHKSLNIKDKISEWEGKKEVPTPAPSRRADGQEDYLPSSTVERRSSDGVRTQVTEAKNGMRPGTESTEKERNKGAVNVGGQDPEPGQDLSQPEREVDPSWGRGREPRLGKLRFQNDPLSVLKQVKKLEQALKDGSAGLDPQLPGTCYSPHCPPDKAEAGSTLPENLGGGSGSEVSQRVHPSDLEGREPTPELVEDRKGSCRRPWDRSLENVYRGSEGSPTKPFINPLPKPRRTFKHAGEGDKDGKPGIGFRKEKRNLPPLPSLPPPPLPSSPPPSSVNRRLWTGRQKSSADHRKSYEFEDLLQSSSESSRVDWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDIELHGRCLGKKCVLNFPASPTSSIPDTLTKQSLSKPAFFRQNSERRNFKLLDTRKLSRDGTGSPSKISPPSTPSSPDDIFFNLGDPQNGRKKRKIPKLVLRINAIYEVRRGKKRVKRLSQSMESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLARELIEYQERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLERSFKFMREAEDQLKAIPQFCFPDAKDWVPVQQFTSETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSRILDEVEKRRGISPALVQPLMRSVMEAPFPALGKTILVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLVCVFASLLLERRVIFIADKLSILSKCCHAMVALIYPFAWQHTYIPVLPPAMVDIVCSPTPFLIGLLSSSLPLLRELPLEEVLVVDLVNSRFLRQMDDEDSILPRKLQVALEHILEQRNELACEQDEGPLDGRHGPESSPLNEVVSEAFVRFFVEIVGHYSLFLTSGEREERTLQREAFRKAVSSKSLRHFLEVFMETQMFRGFIQERELRRQDAKGLFEVRAQEYLETLPSGEHSGVNKFLKGLGNKMKFLHKK", "length": 1009 }, "evidence": [ { "id": "F1SRP8", "url": "https://omabrowser.org/oma/group/F1SRP8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SRP8", "url": "https://www.uniprot.org/uniprotkb/F1SRP8" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "F1SRP8", "url": "https://www.uniprot.org/uniprotkb/F1SRP8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F1SRP8", "url": "https://www.uniprot.org/uniprotkb/F1SRP8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "retrograde transport, endosome to Golgi", "id": "GO:0042147", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042147", "evidence": [ { "database": "UniProtKB", "id": "F1SRP8", "url": "https://www.uniprot.org/uniprotkb/F1SRP8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 100, "end_pos": 102, "annotation": "n_glycosylation_sequon" }, { "start_pos": 157, "end_pos": 159, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SRP8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1008, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SRP8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SRP8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRP8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRP8" }, { "id": "PS50211", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50211" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UDENN", "eco_id": "ECO_0000259", "start_pos": 565, "end_pos": 968, "start_aa": "Glu", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 456 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 100, "end_pos": 102 }, { "start_pos": 157, "end_pos": 159 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRP9-1", "uniprot_ac": "F1SRP9", "uniprot_id": "F1SRP9_PIG", "mass": { "chemical_mass": 69352.0, "monoisotopic_mass": 69352.0 }, "refseq": { "ac": "XP_003134655", "name": "uncharacterized aarF domain-containing protein kinase 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134655" }, "gene_names": [ { "name": "ADCK2", "type": "recommended", "evidence": [ { "id": "F1SRP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRP9" } ] }, { "name": "ADCK2", "type": "synonym", "evidence": [ { "id": "XP_003134655", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134655" } ] } ], "protein_names": [ { "name": "AarF domain containing kinase 2", "type": "synonym", "evidence": [ { "id": "F1SRP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRP9/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized aarF domain-containing protein kinase 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003134655", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134655" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRP9", "url": "https://www.uniprot.org/uniprotkb/F1SRP9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ADCK2", "url": "https://www.uniprot.org/uniprotkb/F1SRP9", "locus": { "chromosome": "18", "start_pos": 9153839, "end_pos": 9173007, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016496", "url": "https://www.ensembl.org/id/ENSSSCG00000016496" } ] } } ], "crossref": [ { "id": "F1SRP9", "url": "https://alphafold.ebi.ac.uk/entry/F1SRP9", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016496", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016496", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13971", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13971", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100514083", "url": "https://www.ncbi.nlm.nih.gov/gene/100514083", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004147", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004147", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR044095", "url": "https://www.ebi.ac.uk/interpro/entry/IPR044095", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052402", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052402", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514083", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514083", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SMVRTHH", "url": "https://omabrowser.org/oma/group/SMVRTHH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRP9", "url": "https://www.orthodb.org/?gene=F1SRP9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45890", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45890", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45890:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45890:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03109", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03109", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF27536", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27536", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003134655", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134655", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SRP9", "url": "https://www.uniprot.org/uniprotkb/F1SRP9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRP9-1", "url": "https://www.uniprot.org/uniprotkb/F1SRP9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVTPWRFSVRVCLSHLRGFELRRELGLLRPAGYSCRARLCWLLLGTLPKLVSVSEDTGGEGAPESLCRQRARRSVLAAHGPLGTVPPEGRLDGLLLHLRIWLRAGALLVKFFPLLLLYPFTYLAPSVSSLWLYLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVPPHPWTHTEHFLRQAFGEDWGRVLCFEKLEPVGSGCVAQVYKARANPAFLENDSIQRLASASSLQPSSEAGVVGRLRERLGPQGKAWGPPGSLADHSFLEKLLLPKADLVGSSAVLFQASGPVRKPEPDHLIPVAVKVLHPGLLAQVQMDLLLMKMGSRVLALLPGIKWLSLPEIVEEFEKLMVQQIDLRYEARNLEHFQCNFLHVNSVKFPTPLRPFVTRDVLVETYEESVPVSSYQQAGIPVDVKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSKSQEARLQQVDVCDALAVAVTPAQCPLRLVLLDAGIVAELQATDLRNFRAVFMAVAMGQGQRVAELILHHARAHECKDVEGFKAEMARLVTQARKNTITLEKLQVSSLLSNVFKLLVTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAAKPFLLQGLATC", "length": 626, "header": "tr|F1SRP9-1|F1SRP9_PIG Isoform 1 of AarF domain containing kinase 2 OS=Sus scrofa OX=9823 GN=ADCK2 PE=3 SV=2 CANONICAL=F1SRP9-1" }, "isoforms": [ { "isoform_ac": "F1SRP9-1", "url": "https://www.uniprot.org/uniprotkb/F1SRP9/entry#F1SRP9-1", "sequence": { "sequence": "MVTPWRFSVRVCLSHLRGFELRRELGLLRPAGYSCRARLCWLLLGTLPKLVSVSEDTGGEGAPESLCRQRARRSVLAAHGPLGTVPPEGRLDGLLLHLRIWLRAGALLVKFFPLLLLYPFTYLAPSVSSLWLYLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVPPHPWTHTEHFLRQAFGEDWGRVLCFEKLEPVGSGCVAQVYKARANPAFLENDSIQRLASASSLQPSSEAGVVGRLRERLGPQGKAWGPPGSLADHSFLEKLLLPKADLVGSSAVLFQASGPVRKPEPDHLIPVAVKVLHPGLLAQVQMDLLLMKMGSRVLALLPGIKWLSLPEIVEEFEKLMVQQIDLRYEARNLEHFQCNFLHVNSVKFPTPLRPFVTRDVLVETYEESVPVSSYQQAGIPVDVKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGADGLSKSQEARLQQVDVCDALAVAVTPAQCPLRLVLLDAGIVAELQATDLRNFRAVFMAVAMGQGQRVAELILHHARAHECKDVEGFKAEMARLVTQARKNTITLEKLQVSSLLSNVFKLLVTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAAKPFLLQGLATC", "length": 626, "header": "tr|F1SRP9-1|F1SRP9_PIG Isoform 1 of AarF domain containing kinase 2 OS=Sus scrofa OX=9823 GN=ADCK2 PE=3 SV=2 CANONICAL=F1SRP9-1" }, "locus": { "chromosome": "18", "start_pos": 9172151, "end_pos": 9154129, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017960.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017960.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017478.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017478.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 482, "start_aa": "Thr", "end_pos": 482, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr482", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRP9", "url": "https://www.uniprot.org/uniprotkb/F1SRP9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514083", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514083", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M9PXA8-1", "protein_name": "Uncharacterized aarF domain-containing protein kinase 2", "gene_name": "adck2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSVFCTRHLLHSFKCFARRLPIPTQSRRVFFVKATRLLSQTPKVGLFCWTACGTIYAAGPESLKNHQNPTERKSVAGVQIHRLVFVLRLGLRALVLLLKFSPLLLLYPLTLLSQRWASHWLDCLLWVTETSGPTFIKLGQWASTRRDIFSQDFCDRFSRLHVRVKAHSWSHTKLCLKRAFGEGWRQMFVFDSKEPVGSGCVAQVYRAKAKVANIQDPAFQKLLEELEKKNLLEAWEIPGLGGALSDFWEINRDEDEMTDGKMKEFGERSGQGEHLEEERLIPVAIKVLHPGIRQQVQIDLILMKAGSLFLNCLPGVKWLSLPEIVEEFQKLMTKQIDLRFEAQNIEKFQKNFKDLEYVKFPTPLRPFVTRTVLVETYEESEPISKYLSSNIPAGVKQRIARMGVDLLLKMVFVDNFVHGDLHPGNILVQGSCGEESEDRATLTDLWDTVVVSMRATPPSLQLVLLDAGIVAQLSEADQRNFRAVFTAVVLRQGERVAELILHHARANECQDVMRFKKEMAELVDRALSDTLSLGKIQVAELLSQVFGLLIHHKVKLESNFASMVFAIMVLEGLGRSLDPNLDILEMAKPLLLKNCTSLL", "length": 599 }, "evidence": [ { "id": "F1SRP9", "url": "https://omabrowser.org/oma/group/F1SRP9/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D3ZRE6-1", "protein_name": "NADH:ubiquinone oxidoreductase subunit B2", "gene_name": "Adck2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNPWRLSVRVCLSHLRCFEFGKELGLSRPLGCSRNARLCWFLLGALPKFISAQGSVGEAAPGSLCQRKTHWSNLPENGLVKVAQEGPLARILLCLCLGLRAGVLLAKFLPLLFLYPLTYLAPGFSTLWLHLLFKATETSGPTYIKLGQWASTRRDLFSEAFCVQFSKLHVQVTPHPWARTEYLLQQAFGEDWHSILFFETQEPVGSGCVAQVYKAFANISLLEKGRIWRLGELSVPGTGTVGTQRDPFMKDWRPSENLADETFIEKLLLPKADLVRSEVGVSQAPGQPPKSDHLIPVAVKVLHPGLLSQVYIDLLLMKIGSQALGLIPGVKWLSLPEIVEEFEKLMVQQTDLRYEAQNLEHFQHNFQNMASVKFPTPLHPLITRDILVETYEESVPVSSYQQAGVPTDLKRKIAQLGINMLFKMIFVDNFVHGDLHPGNILVQGADGVSSSLEMQQQQVDVYDTLVATIAPALCPLRLVLLDAGIVAKLQASDLRNFRAVFLAVAMGQGHRVAELMLHHAQANECKDVEKFKAEMATLVTQARKNTLTLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLGRSLDPKLDILEAAKPFLLKGPASFL", "length": 616 }, "evidence": [ { "id": "F1SRP9", "url": "https://omabrowser.org/oma/group/F1SRP9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1P1M5-1", "protein_name": "AarF domain containing kinase 2", "gene_name": "ADCK2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGCAARLLPLPRLGRAAGARGPLPGWAATGRGGLRAARWAAVALAVPAAAGRKEGPGRWQWQAAAQPVWAGERDPERSARGLLRRLGLVLRLSLRACGLLLRFGPLLLLYPLSRLRPGLAAVWLRLLRRAAEAAGPTCIKLGQWASTRRDLFSEAFCDEFSKLHVEVSPHAWGHTDELLRKAFGEDWRSILTFPSQEPIGSGCVAQVYKAYADLTAIAAPPAKGLARSWELQSAFEAWEVSGLRGLIRWLRRRKSEGMWEERSGAELSPFGCSLGSPVSGTPHVEQMATPLLNAKPSSARHLTPVAVKVLHPGLVHQVQMDLFLMKLGSHIIGLLPGFKWLSLTEIVEEFEKLMLQQIDLHYEARNLERFRQNFLDVDFVKFPTPVHPLVTTDVLVETFEESEPISRYLHTEVATELRQRLAKMGMDMLLKMVFVDNFVHADLHPGNILVQGTACISTSCKEQTAIVDLCDTLVVEVQPPFRQLCLVLLDAGIVAELQSADMQNFRAVFTAVVQGQGEKVAELILHHARANQCQDIERFKAEMAELVTKVRRNTIALGKLQVANLLSSVFKLLMTHKVKLESNFASIIFAIMVLEGLGRSLDPELDILEAAKPLLIRTAASVLE", "length": 626 }, "evidence": [ { "id": "F1SRP9", "url": "https://omabrowser.org/oma/group/F1SRP9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q02981-1", "protein_name": "ABC1 family protein YPL109C, mitochondrial", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSFLKFAYRNSWRYYSKSTRHFHKIPIRQFIIPTSIAFYLTQNSFPKQNCLIYNDSLKPDPKGDTFEMGLYVSSENELQEKLKSFRSAKITESRNKLIRYLRIFWFGFNDNIVEPVCTILRFLEISAIFLPLLLLYPISWFGHKLKITDTNITETRGSLIWCQLLRKALELAGPSFIKLGQWAGSRTDIFSHALCHELGKLHSNVTAHSLSFTLEKLSQALKVDKIEDAFDEFNRTPIGVGSIAQVYVGELSQKYIDKYDNIQIGKDGNRWCAIKILHPNVRSQIRRDLKIMKFCADAINWIPTMEWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVKFPKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKQINDVELCKKVSDPFVDAFLQMLILDDFVHADLHPGNVIIRFVKTNKYGTNIISSELESYRITHDLRKKIEEDQDQDFVGKLKSVLTNYTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSRTPETAIDKEVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSVVVAILLLEGIGRQLDPNLDLFESSLPILREFGFKREAKSLLKDASTLSMLKIWVGLEVRQLMHLSMKQIYDLVRTDQLCPNY", "length": 657 }, "evidence": [ { "id": "F1SRP9", "url": "https://omabrowser.org/oma/group/F1SRP9/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q6NSR3-1", "protein_name": "Uncharacterized aarF domain-containing protein kinase 2", "gene_name": "Adck2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVTPWRLSVRVCLSHLRCFEFRKELGHSRPLGCSRNARLCWFLLGTLPKLISAHGSVGEGAPGSLCQRKTHWSDLAENGLVEKVAQEGPLARVLLCLRLGLRAGVLLAKFFPLLFLYPLTYLAPGLSTLWLHLLFKATETSGPTYIKLGQWASTRRDLFSEAFCTQFSKLHVQVTPHPWARTEYLLQQAFGEDWGSLLFFETREPVGSGCVAQVYKAFASISLLEEDRIWRLGELSAPGTRAVVMQREPFMKDRKPSENLADEAFLEKLLLPKADLGGSEVGVSQAPWHLPKSDHLIPVAVKVLHPGLLSQVSMDLLLMKIGSKALGLLPGVKWLSLPEIVEEFEKLMVQQTDLRYEAQNLEHFQHNFQDMASVKFPTPLRPLITRDILVETYEESVPVSSYQQAGIPTDLKRKIAQLGINMLLKMIFVDNFVHGDLHPGNILVQGADGVSPSLEMQQQQVNVCDTLVATIAPALCPLRLVLLDAGIVAKLQASDLRNFRAVFQAVVMGQGHRVAELMLHHAQANECRDVERFKAEMATLVTQARKNIVTLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVVAIMVLEGLGRSLDPTLDILEAAKPFLFKGPASFL", "length": 617 }, "evidence": [ { "id": "F1SRP9", "url": "https://omabrowser.org/oma/group/F1SRP9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7Z695-1", "protein_name": "Uncharacterized aarF domain-containing protein kinase 2", "gene_name": "ADCK2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVAPWRVSVRVCLSHLRCFELRQGLSLLRPSECPRDARLCWLLLGTLPKVVSLCGDVGEGAPDVLSRRRVRCSGAAGAGPAESLPRAGPLGGVFLHLRLWLRAGALLVKFFPLLLLYPLTYLAPSVSTLWLHLLLKATETSGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTERFLRQAFGDDWGSILSFENREPVGSGCVAQVYKAYANTAFLETDSVQRLGRASCLPPFSHTGAVGGLRELFGYLGNGRKPPENLADQSFLERLLLPKADLVGSNAGVSRAQVPGHQPEATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIVEEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDLKRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAVPSSLCPLRLVLLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVEGFKTEMAMLVTQARKNTITLEKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTGPVCPP", "length": 626 }, "evidence": [ { "id": "F1SRP9", "url": "https://omabrowser.org/oma/group/F1SRP9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "F1SRP9", "url": "https://www.uniprot.org/uniprotkb/F1SRP9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of ubiquinone biosynthetic process", "id": "GO:0010795", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010795", "evidence": [ { "database": "UniProtKB", "id": "F1SRP9", "url": "https://www.uniprot.org/uniprotkb/F1SRP9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 227, "end_pos": 229, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SRP9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 626, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SRP9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SRP9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRP9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRP9" }, { "id": "PF03109", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03109" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ABC1 atypical kinase-like", "eco_id": "ECO_0000259", "start_pos": 309, "end_pos": 527, "start_aa": "Val", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 482 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 227, "end_pos": 229 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRQ4-1", "uniprot_ac": "F1SRQ4", "uniprot_id": "F1SRQ4_PIG", "mass": { "chemical_mass": 51461.0, "monoisotopic_mass": 51461.0 }, "refseq": {}, "gene_names": [ { "name": "DENND11", "type": "recommended", "evidence": [ { "id": "F1SRQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4" } ] } ], "protein_names": [ { "name": "DENN domain-containing protein 11", "type": "recommended", "evidence": [ { "id": "F1SRQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4/entry#names_and_taxonomy" } ] }, { "name": "Protein LCHN", "type": "synonym", "evidence": [ { "id": "F1SRQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRQ4", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DENND11", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4", "locus": { "chromosome": "18", "start_pos": 8261702, "end_pos": 8205600, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016491", "url": "https://www.ensembl.org/id/ENSSSCG00000016491" } ] } } ], "crossref": [ { "id": "F1SRQ4", "url": "https://alphafold.ebi.ac.uk/entry/F1SRQ4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016491", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016491", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR018626", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018626", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037516", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037516", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051731", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051731", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KYMYPEM", "url": "https://omabrowser.org/oma/group/KYMYPEM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRQ4", "url": "https://www.orthodb.org/?gene=F1SRQ4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31017", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31017", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31017:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31017:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09804", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09804", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SRQ4", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRQ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVERGDAAPLLRWAEGPAVSPPLAPDPQAGGRGWGGGGGGGRLAAEPPRRREPEELGPSEVLLQPGRLVLGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKGPFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTVPESKPFFYVNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARVMGLDPQGDRSFLLDLLEAYGIDVMLVIDNPCCP", "length": 456, "header": "tr|F1SRQ4-1|F1SRQ4_PIG Isoform 1 of DENN domain-containing protein 11 OS=Sus scrofa OX=9823 GN=DENND11 PE=3 SV=2 CANONICAL=F1SRQ4-1" }, "isoforms": [ { "isoform_ac": "F1SRQ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4/entry#F1SRQ4-1", "sequence": { "sequence": "MVERGDAAPLLRWAEGPAVSPPLAPDPQAGGRGWGGGGGGGRLAAEPPRRREPEELGPSEVLLQPGRLVLGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKGPFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTVPESKPFFYVNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARVMGLDPQGDRSFLLDLLEAYGIDVMLVIDNPCCP", "length": 456, "header": "tr|F1SRQ4-1|F1SRQ4_PIG Isoform 1 of DENN domain-containing protein 11 OS=Sus scrofa OX=9823 GN=DENND11 PE=3 SV=2 CANONICAL=F1SRQ4-1" }, "locus": { "chromosome": "18", "start_pos": 8256266, "end_pos": 8205726, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017955.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017955.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017473.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017473.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 292, "start_aa": "Thr", "end_pos": 292, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr292", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRQ4", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A4D1U4-1", "protein_name": "DENN domain-containing protein 11", "gene_name": "DENND11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVEQGDAAPLLRWAEGPAVSLPQAPQPQAGGWGRGGGGGARPAAEPPRRREPEEPAAPEVLLQPGRLELGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKGPFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAAFYEDKKGVLHAGPGRGSSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQGDRSFLLDLLEAYGIDVMLVIDNPCCP", "length": 455 }, "evidence": [ { "id": "F1SRQ4", "url": "https://omabrowser.org/oma/group/F1SRQ4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F1MN85-1", "protein_name": "DENN domain-containing protein 11", "gene_name": "DENND11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVERGDAAPLLRWAEGPAVSPPRAPVPQAGGRGWGGGGGGWAAAEPPRRREPEELRQPGRLELGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKGPFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRHMHFLENQVRHQLETPGHYSHLAAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTVPESKPFFYVNVADIETLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSSSQDKTLTAEHARGMGLDPQGDRSFLMDLLEAYGIDVMLVIDNPCCP", "length": 449 }, "evidence": [ { "id": "F1SRQ4", "url": "https://omabrowser.org/oma/group/F1SRQ4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q0PGW2-1", "protein_name": "DENN domain-containing protein 11", "gene_name": "Dennd11", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVEQGDAAPLLRWAEGPAVSVPQDPALQAGGWVRGGSGGGRVAAEAPRRREPEEPAPPEVLLQPGRLELGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKGPFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKLNSADREKYRRLNEQRQMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQGDRSFLMDLLEAYGIDVMLVIDNPCCP", "length": 455 }, "evidence": [ { "id": "F1SRQ4", "url": "https://omabrowser.org/oma/group/F1SRQ4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q1LX49-1", "protein_name": "DENN domain-containing protein 11", "gene_name": "dennd11", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVEQSDRAPLLDWEEIPPAELAPSVPSPDTGDSLQSGLSSYPTEATLGADITLNTSPTRPSSVAAVHSPHKQHSGPGGDALAEEDEPGDCAFHGLSVRDRRITGWEEKDQIVAVFVVTFDTRSGNMIEWCLPHDVNLEGVEFKSMASGSHRISSDFIYFRKGCYFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLQCPGQYSPLEAFYEDKKAVLPSGGNGLVTACPTSALAPIVNRCMHPEMKITHPAGCMSQFIRFFGEQIMVLWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSIPGMGVSVPEFRPFFYINVADIPALETELSYVACTTEKIFEEKKELYDVYIDNQNVKTHRESLQPLLRLNSADREKYRKLCEQRQLLLYSQEVDGDCTSNEEDLFILFFMEQNNRIFQTLSEVAVSADPTLTAEHVRAMGLDPQGDRGFLVDLLEIYGIDVMLVIDNPCCP", "length": 490 }, "evidence": [ { "id": "F1SRQ4", "url": "https://omabrowser.org/oma/group/F1SRQ4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3UHG7-1", "protein_name": "DENN domain-containing protein 11", "gene_name": "Dennd11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVEQGDAAPLLRWAEGPAVSVPQDPALQAGGWVRGGSGEGRVAAEAPRRREPDEPAPPEVLLQPGRLELGDVEEDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKVQSDFIYFRKGPFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAAFYEDKKGVLHAGPGRGGSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNEQRQMLLYSQEVEGDYSPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQGDRSFLMDLLEAYGIDVMLVIDNPCCP", "length": 455 }, "evidence": [ { "id": "F1SRQ4", "url": "https://omabrowser.org/oma/group/F1SRQ4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SRQ4", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F1SRQ4", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 283, "end_pos": 285, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SRQ4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 456, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SRQ4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SRQ4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRQ4" }, { "id": "PS50211", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50211" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UDENN", "eco_id": "ECO_0000259", "start_pos": 18, "end_pos": 456, "start_aa": "Ala", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 292 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 283, "end_pos": 285 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRR3-1", "uniprot_ac": "F1SRR3", "uniprot_id": "F1SRR3_PIG", "mass": { "chemical_mass": 42840.0, "monoisotopic_mass": 42840.0 }, "refseq": { "ac": "XP_020929895", "name": "WD repeat-containing protein 89", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929895" }, "gene_names": [ { "name": "WDR89", "type": "recommended", "evidence": [ { "id": "F1SRR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRR3" } ] }, { "name": "WDR89", "type": "synonym", "evidence": [ { "id": "XP_020929895", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929895" } ] } ], "protein_names": [ { "name": "WD repeat-containing protein 89", "type": "recommended", "evidence": [ { "id": "F1SRR3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRR3/entry#names_and_taxonomy" } ] }, { "name": "WD repeat-containing protein 89", "type": "synonym", "evidence": [ { "id": "XP_020929895", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929895" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRR3", "url": "https://www.uniprot.org/uniprotkb/F1SRR3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "WDR89", "url": "https://www.uniprot.org/uniprotkb/F1SRR3", "locus": { "chromosome": "1", "start_pos": 194475872, "end_pos": 194439820, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005112", "url": "https://www.ensembl.org/id/ENSSSCG00000005112" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005112", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005112", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100739573", "url": "https://www.ncbi.nlm.nih.gov/gene/100739573", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001680", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001680", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015943", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015943", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036322", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036322", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039328", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039328", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100739573", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739573", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YHEKTDK", "url": "https://omabrowser.org/oma/group/YHEKTDK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRR3", "url": "https://www.orthodb.org/?gene=F1SRR3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22889", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22889", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22889:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22889:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00400", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00400", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020929895", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020929895", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SRR3", "url": "https://www.uniprot.org/uniprotkb/F1SRR3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRR3-1", "url": "https://www.uniprot.org/uniprotkb/F1SRR3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEKMEEQFANLNIVKRSSETKEPTYLLGIDTSKTISAEKGSLVAVLCSSGSIRIYDKERLNILREFRGYPGLNGVKFASSHDSVYSSCADGTVKCWDARLASNKPVQLFKGYPSNIFISFDISCNDHIICAGTEKVDDDALLVFWDARINSQGLSAPKDPLGAYSETHSDDITQVCFHPRDPNMVVSGSTDGLVNVFDISADNEEDALVTTCNSVSSVSSIGWSGKDYKQIYCMTHDEGFCWWDLNHLDTDEPITRLNIQDVRQVINVKEGVLDYLIGGLYHEKTDRLFVVGGTNQGIIHIMSCTASGLVHVTSLQGGHAATVRSFCWNMQDDSLLTGGEDAQLLLWKPGATEKTFTKKDSMKIASSVYQRVRVHSNDSYKRRKKQ", "length": 386, "header": "tr|F1SRR3-1|F1SRR3_PIG Isoform 1 of WD repeat-containing protein 89 OS=Sus scrofa OX=9823 GN=WDR89 PE=4 SV=1 CANONICAL=F1SRR3-1" }, "isoforms": [ { "isoform_ac": "F1SRR3-1", "url": "https://www.uniprot.org/uniprotkb/F1SRR3/entry#F1SRR3-1", "sequence": { "sequence": "MEKMEEQFANLNIVKRSSETKEPTYLLGIDTSKTISAEKGSLVAVLCSSGSIRIYDKERLNILREFRGYPGLNGVKFASSHDSVYSSCADGTVKCWDARLASNKPVQLFKGYPSNIFISFDISCNDHIICAGTEKVDDDALLVFWDARINSQGLSAPKDPLGAYSETHSDDITQVCFHPRDPNMVVSGSTDGLVNVFDISADNEEDALVTTCNSVSSVSSIGWSGKDYKQIYCMTHDEGFCWWDLNHLDTDEPITRLNIQDVRQVINVKEGVLDYLIGGLYHEKTDRLFVVGGTNQGIIHIMSCTASGLVHVTSLQGGHAATVRSFCWNMQDDSLLTGGEDAQLLLWKPGATEKTFTKKDSMKIASSVYQRVRVHSNDSYKRRKKQ", "length": 386, "header": "tr|F1SRR3-1|F1SRR3_PIG Isoform 1 of WD repeat-containing protein 89 OS=Sus scrofa OX=9823 GN=WDR89 PE=4 SV=1 CANONICAL=F1SRR3-1" }, "locus": { "chromosome": "1", "start_pos": 194475025, "end_pos": 194473868, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005635.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005635.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005494.1", "url": "https://www.ensembl.org/id/ENSSSCP00000005494.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRR3", "url": "https://www.uniprot.org/uniprotkb/F1SRR3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739573", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739573", 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRS0-1", "uniprot_ac": "F1SRS0", "uniprot_id": "F1SRS0_PIG", "mass": { "chemical_mass": 27164.0, "monoisotopic_mass": 27164.0 }, "refseq": {}, "gene_names": [ { "name": "PRSS58", "type": "recommended", "evidence": [ { "id": "F1SRS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRS0" } ] } ], "protein_names": [ { "name": "Serine protease 58", "type": "synonym", "evidence": [ { "id": "F1SRS0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRS0/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], 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"Protein Classification" ] }, { "id": "IPR001254", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001254", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001314", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001314", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009003", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009003", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018114", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018114", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24271", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24271", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24271:SF56", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24271:SF56", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00089", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00089", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SRS0", "url": "https://www.uniprot.org/uniprotkb/F1SRS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SRS0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKFIFVWALSNLPVALPFDPDYKDAITPPYMVYLKSDYLPCAGVLIHPLWVITAAHCNLPKLQLIGITKPSNLKEENYLQVVGYEKMIHHPKFSITSIEHNLMLIKLSDNIELNDYVKLASLPREPAAENTLCMVSTWAYHVCDIYKGPDSLQNVNISVISNTECRAAYKTYNIRDTMLCVGIVPGRRQPCKEVTAAPAVCDGKLQGILTFADGCVLRADVGIYTRIINYMPWIENTIRNN", "length": 241, "header": "tr|F1SRS0-1|F1SRS0_PIG Isoform 1 of Serine protease 58 OS=Sus scrofa OX=9823 GN=PRSS58 PE=4 SV=3 CANONICAL=F1SRS0-1" }, "isoforms": [ { "isoform_ac": "F1SRS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SRS0/entry#F1SRS0-1", "sequence": { "sequence": "MKFIFVWALSNLPVALPFDPDYKDAITPPYMVYLKSDYLPCAGVLIHPLWVITAAHCNLPKLQLIGITKPSNLKEENYLQVVGYEKMIHHPKFSITSIEHNLMLIKLSDNIELNDYVKLASLPREPAAENTLCMVSTWAYHVCDIYKGPDSLQNVNISVISNTECRAAYKTYNIRDTMLCVGIVPGRRQPCKEVTAAPAVCDGKLQGILTFADGCVLRADVGIYTRIINYMPWIENTIRNN", "length": 241, "header": "tr|F1SRS0-1|F1SRS0_PIG Isoform 1 of Serine protease 58 OS=Sus scrofa OX=9823 GN=PRSS58 PE=4 SV=3 CANONICAL=F1SRS0-1" }, "locus": { "chromosome": "18", "start_pos": 7722933, "end_pos": 7716336, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017949.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017949.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017467.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017467.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRS0", "url": "https://www.uniprot.org/uniprotkb/F1SRS0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "F1SRS0", "url": "https://www.uniprot.org/uniprotkb/F1SRS0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SRS0", "url": "https://www.uniprot.org/uniprotkb/F1SRS0" } ], "pmid": "" }, { "name": "secretory granule", "id": "GO:0030141", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030141", "evidence": [ { "database": "UniProtKB", "id": "F1SRS0", "url": "https://www.uniprot.org/uniprotkb/F1SRS0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SRS0", "url": 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"Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050413", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050413", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23268", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23268", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23268:SF28", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23268:SF28", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SRS5", "url": "https://www.uniprot.org/uniprotkb/F1SRS5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRS5-1", "url": "https://www.uniprot.org/uniprotkb/F1SRS5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDNQVICCVALCLLGAGTIDGGITQTPKYLFKEEGQEVTLECKQDFNHDAMYWYRQDPGQGLRLIYFSLVVPDVQKADIASGYNASREKKAFFPLTVTLTQKNQTSLYLCASSIDTVKQSRLLGAHK", "length": 127, "header": "tr|F1SRS5-1|F1SRS5_PIG Isoform 1 of T cell receptor beta variable 19 OS=Sus scrofa OX=9823 GN=TRBV19 PE=4 SV=3 CANONICAL=F1SRS5-1" }, "isoforms": [ { "isoform_ac": "F1SRS5-1", "url": "https://www.uniprot.org/uniprotkb/F1SRS5/entry#F1SRS5-1", "sequence": { "sequence": "MDNQVICCVALCLLGAGTIDGGITQTPKYLFKEEGQEVTLECKQDFNHDAMYWYRQDPGQGLRLIYFSLVVPDVQKADIASGYNASREKKAFFPLTVTLTQKNQTSLYLCASSIDTVKQSRLLGAHK", "length": 127, "header": "tr|F1SRS5-1|F1SRS5_PIG Isoform 1 of T cell receptor beta variable 19 OS=Sus scrofa OX=9823 GN=TRBV19 PE=4 SV=3 CANONICAL=F1SRS5-1" }, "locus": { "chromosome": "18", "start_pos": 7539369, "end_pos": 7538856, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017943.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017943.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017462.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017462.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRS5", "url": "https://www.uniprot.org/uniprotkb/F1SRS5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SRS5", "url": "https://www.uniprot.org/uniprotkb/F1SRS5" } ], "pmid": "" }, { "name": "alpha-beta T cell receptor complex", "id": "GO:0042105", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042105", "evidence": [ { "database": "UniProtKB", "id": "F1SRS5", "url": "https://www.uniprot.org/uniprotkb/F1SRS5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cell surface receptor signaling pathway", "id": "GO:0007166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007166", "evidence": [ { "database": "UniProtKB", "id": "F1SRS5", "url": "https://www.uniprot.org/uniprotkb/F1SRS5" } ], "pmid": "" }, { "name": "immune system process", "id": "GO:0002376", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002376", "evidence": [ { "database": "UniProtKB", "id": "F1SRS5", "url": "https://www.uniprot.org/uniprotkb/F1SRS5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 84, "end_pos": 86, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SRS5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 127, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SRS5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SRS5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRS5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRS5" }, { "id": "PF07686", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Immunoglobulin V-set", "eco_id": "ECO_0000259", "start_pos": 25, "end_pos": 114, "start_aa": "Gln", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 103, "end_pos": 105 }, { "start_pos": 84, "end_pos": 86 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 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the trafficking and exocytosis of secretory vesicles in non-neuronal tissues. Is Ca(2+)-independent.", "evidence": [ { "database": "UniProtKB", "id": "F1SRU3", "url": "https://www.uniprot.org/uniprotkb/F1SRU3#function" }, { "database": "UniProtKB", "id": "ARBA00056709", "url": "https://www.uniprot.org/uniprotkb/ARBA00056709#function" }, { "database": "UniProtKB", "id": "A0A8W4F7W1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7W1#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRU3", "url": "https://www.uniprot.org/uniprotkb/F1SRU3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SYT16", "url": "https://www.uniprot.org/uniprotkb/F1SRU3", "locus": { "chromosome": "1", "start_pos": 191031684, "end_pos": 190735881, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005098", "url": "https://www.ensembl.org/id/ENSSSCG00000005098" } ] } } ], "crossref": [ { "id": "F1SRU3", "url": "https://alphafold.ebi.ac.uk/entry/F1SRU3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005098", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005098", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08389", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08389", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd08408", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08408", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100522358", "url": "https://www.ncbi.nlm.nih.gov/gene/100522358", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000008", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000008", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035892", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035892", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043541", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043541", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522358", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522358", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CAIRFRL", "url": "https://omabrowser.org/oma/group/CAIRFRL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRU3", "url": "https://www.orthodb.org/?gene=F1SRU3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46129", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46129", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46129:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46129:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00168", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00168", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020918194", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020918194", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4F7W1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7W1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7W1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7W1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRU3", "url": "https://www.uniprot.org/uniprotkb/F1SRU3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRU3-1", "url": "https://www.uniprot.org/uniprotkb/F1SRU3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPLAMASQDAQNFFQPLSSWISQVYEALQQARDALSASLVNFSKQDSKGSDKLDQDLDDIQIQETYFEDEEQSNDWTQEDTNSLFLEVDHFSCCNSDFQDSAQNSSPRLSRHAKDSCSVASQWPSQTLDDQKPPHVLSSIADEEHHLGKQRSGLQHDFDGQLSGILENVNGKKQVNKFGDDEELSTSSDTDEEVIKQFEISVSRSQSLRSGASEKGRQAGLEQKPKARRWLSTHKEDSKEVPACKGLDGASQPNYSEHLSYGEDGPISAHSWSPSELGDTRQQGTSPQETCVVRCLSRQSTEGSLEMEAAFNNRGFEDSYATDSSSVWSPEEQDRTSFQVPSGVPEPISKCGDLDVIFEYRAASQKLTVTIVRAQGLPDKDRSGVNSWQVHVVLLPNKKQRGRTGIQRGPNPIFKEKVTFAKLEPRDVAACAVRFRLYAARKMTRERMMGEGLFYLSHLHQEGEMKVTLVLEPRSNISGGESPLSPSAVSHSDSASSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLSVNRAPDTYGKLFLLNSVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISVYNRRTMKRKEMIGWIALGQNSSGEEERDHWEEMKETKGQQVCRWHTLLES", "length": 645, "header": "tr|F1SRU3-1|F1SRU3_PIG Isoform 1 of Synaptotagmin 16 OS=Sus scrofa OX=9823 GN=SYT16 PE=3 SV=3 CANONICAL=F1SRU3-1" }, "isoforms": [ { "isoform_ac": "A0A8W4F7W1-1", "url": "https://www.uniprot.org/uniprotkb/F1SRU3/entry#A0A8W4F7W1-1", "sequence": { "sequence": "MVLFLFINKKLCLEVTEGLPGLEQRGKRKHSTDKAGTHERLVNKFGDDEELSTSSDTDEEVIKQFEISVSRSQSLRSGASEKGRQAGLEQKPKARRWLSTHKEDSKEVPACKGLDGASQPNYSEHLSYGEDGPISAHSWSPSELGDTRQQGTSPQETCVVRCLSRQSTEGSLEMEAAFNNRGFEDSYATDSSSVWSPEEQDRTSFQVPSGVPEPISKCGDLDVIFEYRAASQKLTVTIVRAQGLPDKDRSGVNSWQVHVVLLPNKKQRGRTGIQRGPNPIFKEKVTFAKLEPRDVAACAVRFRLYAARKMTRERMMGEGLFYLSHLHQEGEMKVTLVLEPRSNISGGESPLSPSAVSHSDSASSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLSVNRAPDTYGKLFLLNSVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISVYNRRTMKRKEMIGWIALGQNSSGEEERDHWEEMKETKGQQVCRWHTLLES", "length": 512, "header": "tr|A0A8W4F7W1-1|A0A8W4F7W1_PIG Computationally mapped isoform of Synaptotagmin 16 OS=Sus scrofa OX=9823 GN=SYT16 PE=3 SV=1 CANONICAL=F1SRU3-1" }, "locus": { "chromosome": "1", "start_pos": 191026117, "end_pos": 190874873, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103801.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103801.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074869.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074869.1" } ] } }, { "isoform_ac": "F1SRU3-1", "url": "https://www.uniprot.org/uniprotkb/F1SRU3/entry#F1SRU3-1", "sequence": { "sequence": "MPLAMASQDAQNFFQPLSSWISQVYEALQQARDALSASLVNFSKQDSKGSDKLDQDLDDIQIQETYFEDEEQSNDWTQEDTNSLFLEVDHFSCCNSDFQDSAQNSSPRLSRHAKDSCSVASQWPSQTLDDQKPPHVLSSIADEEHHLGKQRSGLQHDFDGQLSGILENVNGKKQVNKFGDDEELSTSSDTDEEVIKQFEISVSRSQSLRSGASEKGRQAGLEQKPKARRWLSTHKEDSKEVPACKGLDGASQPNYSEHLSYGEDGPISAHSWSPSELGDTRQQGTSPQETCVVRCLSRQSTEGSLEMEAAFNNRGFEDSYATDSSSVWSPEEQDRTSFQVPSGVPEPISKCGDLDVIFEYRAASQKLTVTIVRAQGLPDKDRSGVNSWQVHVVLLPNKKQRGRTGIQRGPNPIFKEKVTFAKLEPRDVAACAVRFRLYAARKMTRERMMGEGLFYLSHLHQEGEMKVTLVLEPRSNISGGESPLSPSAVSHSDSASSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLSVNRAPDTYGKLFLLNSVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISVYNRRTMKRKEMIGWIALGQNSSGEEERDHWEEMKETKGQQVCRWHTLLES", "length": 645, "header": "tr|F1SRU3-1|F1SRU3_PIG Isoform 1 of Synaptotagmin 16 OS=Sus scrofa OX=9823 GN=SYT16 PE=3 SV=3 CANONICAL=F1SRU3-1" }, "locus": { "chromosome": "1", "start_pos": 191026117, "end_pos": 190906236, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005620.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005620.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005479.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005479.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRU3", "url": "https://www.uniprot.org/uniprotkb/F1SRU3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522358", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522358", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K644-1", "protein_name": "Synaptotagmin 16", "gene_name": "Syt16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVLVMASQDVQNFFQPLSSWLSRVYEALQQAGDALSASLVLLSKHDSALSDKPEQDLDAIQIQETCLEDGEQDNDGGPEETGSLFLEEDHFSSSNSDLRDSVQTASLRLGQQAKDSSTVISQWPNKIPGGPKPPHVLSSIAEEEHHSEGQRCDLQHGSDTQLPGSLEKVNGRKQANSFGDDEEPSTSSESDEDVTKQFEISVSRSQSFRTGVPEKGKTTELEQKTKCKHFLCTHQEDSAEGSACEDLDGPSQLSYSEIRSYEDRPISILSQSPCESRDTRHHGPCHLGAGVVRNLSRPCADGILETETAFISRGFEDPYATHNSSMWSPEEQDGTSLQVPPRLPEPISKCGDLDVIFEYRAVTQKLTVTIVRAQGLPDKDRSGVNSWQVHIVLLPSKKQRGKTNIQRGPNPVFKEKVTFTKLEPRDVAACAVRFRLYAARKMTRERMMGEKLFCLSHLHPEGEMKVTLVLEPRSNLSSGESPLSPSVVSHSDSASSTQSLSHGGVPELLVGLSYNATTGRLSVEMIKGSHFRNLAANRAPDTYGKLFLLNCVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISIYSRRTMKRKEMIGWIALGQNSSGEEEQEHWDEMKDSKSQQICRWHTLLES", "length": 644 }, "evidence": [ { "id": "F1SRU3", "url": "https://omabrowser.org/oma/group/F1SRU3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0Z3E1-1", "protein_name": "Synaptotagmin 16", "gene_name": "SYT16", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MTSEAAQSFLQPLSSWLSQIYEAIQQAGDSISASLLNLNGVGRESEEDRNRGLEGNGVAYEDYSVESEDERHIDLWDEEYICPREDGHIAGRDLASEALPCGSDMGMQRQKWVKNTTSLAGQCVERTGHLVANGSHWINEDLQPLPTISEDESEPSVRMRGHDHSISMDGSLEINKDKASFADLDGLSQLSYQDNLSCHEDDHVSVDSRTTERRSAGQHTGPRMESSIADGFSQQATEGRLELEAAFTNQGFEGNDATDSSSAWSPEETDEVNSEPAHHSAHQPICKCGDLDVIFSYKASSQKLVVTVLEARDIPDKDRSGVNTWQVHTVLMPSKKQRGKTSVQRGPIPMFKDNITFSKLEPHELGGHAVRFRLYAVHKVIGEKMMGEQLFYLSNVSQEEEVKVTLVLEPRSNLTSADSQLSLSAISHSDSASSTQSLSHGGVPELLVGLSYNATTGRLSVEMIKGSHFRNLAINRPPALPIPPWSIHSPAGTSPPSPPPRVAPVMGRASPSPSNAPSNAPSNRATSAPAGPIRAGHIWAPTSAGCSRAVMRSSVAAGTRRSCHQCHHLQRQPAARSGRERTKDGSSSPSRAGDRRVTFCGAVLPAMLAEPVRGDLTGTAGIIPERPFAD", "length": 630 }, "evidence": [ { "id": "F1SRU3", "url": "https://omabrowser.org/oma/group/F1SRU3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q17RD7-1", "protein_name": "Synaptotagmin-16", "gene_name": "SYT16", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVLAMASQDVQNFFQPFSSWISRVYEALQQAGDMLSASLVNISKQDSKLSDKLDQDLDNIQIQETYFEDEEQDNDWSQEDANSLFLEVDHFSCCNSDLQDSAQNSSPSLSQHAKDSCSTMSQWPNWASDDRKLPHVLSSIAEEEHHLEKQRSGLQHGFDSQLPGTLETVNGKKQVNSFGDDEELSTSSDSDEEVIKQFEISVSRSQSFRSVTSEKGKQTGLEQKPKFSRSLLTHGEDGTEVSACEDLDGASQRRYSENLSYGEDDHIPAHSQSPCERGDAKHHGTSHQESSVVQSLRRQSTEGSLEMETAFNSRGFEDSYATDSSSMWSPEEQDRTNLQVPSGVSEPISKCGDLDVIFEYRAASQKLTVTIVRAQGLPDKDRSGVNSWQVHVVLLPGKKHRGRTNIQRGPNPVFREKVTFAKLEPRDVAACAVRFRLYAARKMTRERMMGEKLFYLSHLHPEGEMKVTLVLEPRSNISSGGSPLSPSAVSHSDSTSSTQSLSHGGAPELLVGLSYNATTGRLSVEMIKGSHFRNLAVNRAPDTYGKLFLLNSVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISVYNRRTMKRKEMIGWIALGQNSSGEEEQDHWEEMKETKGQQICRWHTLLES", "length": 645 }, "evidence": [ { "id": "F1SRU3", "url": "https://omabrowser.org/oma/group/F1SRU3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TN83-1", "protein_name": "Synaptotagmin-16", "gene_name": "Syt16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLTMASQDVQNFFQPLSSWLSRVYEALQQAGDALSASLVLLSKHDSALSDKPEQDLDAAQIQQTYLEDEEQDHDGSPEEASSLFLEEDHFSLSNSDLQDSVQTASPTLGQQAEDSSSVIPPWPSKIPGAPKPQPVLSSIAEEDHHSERQRCGRQHGSGTLEKVNGRKQVNSFGDDEEPSTSSESDEDVTKQFKISVSRSQSFRSGVSEKGKTTELEQKIKCKRLLCTHQEDSAEGSACEDLDRTSQLSYSEILSYEDRPISILPQSPFESRNVRHHGPCRPEMGMVRSLGRPCADGVLETETAFVSRGFEDSYATHSSSLWSPEEQDGTSLQVPHRLLEPISKCGDLDVIFEYRAVTQKLTVTIVRAQGLPDKDRSGVNSWQVHIVLLPSKKQRGKTNIQRGPNPVFKEKVTFTKLEPRDVASCAVRFRLYAARKMTRERMMGEKLFCLSHLHPEGEMKVTLVLEPRSNLSSGESPLSPSVVSHSDSASSTQSLSHGGVPELLVGLSYNATTGRLSVEMIKGSHFRNLAANRAPDTYGKLFLLNCVGQEMSRCKTSIRRGQPNPVYKETFVFQVALFQLSDVTLMISIYSRRTMKRKEMIGWVALGQNSSGEEEQEHWEEMKESKGQQTCRWHTLLES", "length": 639 }, "evidence": [ { "id": "F1SRU3", "url": "https://omabrowser.org/oma/group/F1SRU3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "phospholipid binding", "id": "GO:0005543", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005543", "evidence": [ { "database": "UniProtKB", "id": "F1SRU3", "url": "https://www.uniprot.org/uniprotkb/F1SRU3" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1SRU3", "url": "https://www.uniprot.org/uniprotkb/F1SRU3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 41, "end_pos": 43, "annotation": "n_glycosylation_sequon" }, { "start_pos": 476, "end_pos": 478, "annotation": "n_glycosylation_sequon" }, { "start_pos": 516, "end_pos": 518, "annotation": "n_glycosylation_sequon" }, { "start_pos": 534, "end_pos": 536, "annotation": "n_glycosylation_sequon" }, { "start_pos": 615, "end_pos": 617, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SRU3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 645, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SRU3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SRU3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SRU3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRU3" }, { "id": "PS50004", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50004" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2", "eco_id": "ECO_0000259", "start_pos": 350, "end_pos": 469, "start_aa": "Lys", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 104, "end_pos": 106 }, { "start_pos": 254, "end_pos": 256 }, { "start_pos": 41, "end_pos": 43 }, { "start_pos": 476, "end_pos": 478 }, { "start_pos": 516, "end_pos": 518 }, { "start_pos": 534, "end_pos": 536 }, { "start_pos": 615, "end_pos": 617 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRW4-1", "uniprot_ac": "F1SRW4", "uniprot_id": "F1SRW4_PIG", "mass": { "chemical_mass": 45522.0, "monoisotopic_mass": 45522.0 }, "refseq": { "ac": "XP_001925579", "name": "protein CNPPD1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925579" }, "gene_names": [ { "name": "CNPPD1", "type": "recommended", "evidence": [ { "id": "F1SRW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRW4" } ] }, { "name": "CNPPD1", "type": "synonym", "evidence": [ { "id": "XP_001925579", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925579" } ] } ], "protein_names": [ { "name": "Protein CNPPD1", "type": "recommended", "evidence": [ { "id": "F1SRW4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRW4/entry#names_and_taxonomy" } ] }, { "name": "protein CNPPD1", "type": "synonym", "evidence": [ { "id": "XP_001925579", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925579" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRW4", "url": "https://www.uniprot.org/uniprotkb/F1SRW4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CNPPD1", "url": "https://www.uniprot.org/uniprotkb/F1SRW4", "locus": { "chromosome": "15", "start_pos": 121207142, "end_pos": 121212766, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016206", "url": "https://www.ensembl.org/id/ENSSSCG00000016206" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016206", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016206", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20557", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20557", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100157604", "url": "https://www.ncbi.nlm.nih.gov/gene/100157604", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013922", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013922", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100157604", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157604", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SPWYHTH", "url": "https://omabrowser.org/oma/group/SPWYHTH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SRW4", "url": "https://www.orthodb.org/?gene=F1SRW4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15615", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15615", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15615:SF108", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15615:SF108", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08613", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08613", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_001925579", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001925579", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SRW4", "url": "https://www.uniprot.org/uniprotkb/F1SRW4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRW4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRW4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDLAGLLLDEEGTFSLAGFQDFTFLPGHQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWRLYTDPREIFEVLSWLESCVAEQQGRRRGWYTYTDLCVLLEQPAWQLALGSLCQRLAKLSCLLAMAYVSSVALAVASMAVIHQSLGLSCSPPPGPPDLGLASRCLLEPCIPSPVPRCLPSPANVSGCLEGDTGLRSLWGSLLASLTPPPLPPPDSPAPTSLLRNCPLCQKLRKDSPTCRTCHHLNRTIPTGRPRPWSHSHGLAPPWPWSPMPSLLPQPQQCSLFSVMELARLKSFIFPG", "length": 411, "header": "tr|F1SRW4-1|F1SRW4_PIG Isoform 1 of Protein CNPPD1 OS=Sus scrofa OX=9823 GN=CNPPD1 PE=3 SV=2 CANONICAL=F1SRW4-1" }, "isoforms": [ { "isoform_ac": "F1SRW4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRW4/entry#F1SRW4-1", "sequence": { "sequence": "MDLAGLLLDEEGTFSLAGFQDFTFLPGHQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWRLYTDPREIFEVLSWLESCVAEQQGRRRGWYTYTDLCVLLEQPAWQLALGSLCQRLAKLSCLLAMAYVSSVALAVASMAVIHQSLGLSCSPPPGPPDLGLASRCLLEPCIPSPVPRCLPSPANVSGCLEGDTGLRSLWGSLLASLTPPPLPPPDSPAPTSLLRNCPLCQKLRKDSPTCRTCHHLNRTIPTGRPRPWSHSHGLAPPWPWSPMPSLLPQPQQCSLFSVMELARLKSFIFPG", "length": 411, "header": "tr|F1SRW4-1|F1SRW4_PIG Isoform 1 of Protein CNPPD1 OS=Sus scrofa OX=9823 GN=CNPPD1 PE=3 SV=2 CANONICAL=F1SRW4-1" }, "locus": { "chromosome": "15", "start_pos": 121211469, "end_pos": 121207797, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017647.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017647.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017169.3", "url": "https://www.ensembl.org/id/ENSSSCP00000017169.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SRW4", "url": "https://www.uniprot.org/uniprotkb/F1SRW4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157604", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157604", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3HWF7-1", "protein_name": "Protein CNPPD1", "gene_name": "Cnppd1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLAGLLLDEEGTFSLTGFQDFTFLPGHQKLSARIRRRLYYGWDWETDCTLEELSSPVADITVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWRLYTDPREIFEVLNWLESCVAEQQGRRRGWYTYTDLCVLLEQPAWQLSLGSLCQRLVKLSCLLAVAYVSSVALAVASVAVIHQSLGLSCSPSPGPPDLILVSKGLLQSCIHSPVPQCLTNVSRCQEDNVELPSLWGSLLASLTPPPVPPPDPPAPPTPLHKCPFCEKFQRTPPNCRACHQPNRTVSIGPSRPFYHTHGLAPPWLWSPVSPPFLQPQQCSLFSVMELARLKSFIFPG", "length": 408 }, "evidence": [ { "id": "F1SRW4", "url": "https://omabrowser.org/oma/group/F1SRW4/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q6P7B2-1", "protein_name": "Protein CNPPD1", "gene_name": "Cnppd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLAGLLLDEEGTFSLSGFQDFTFLPGHQKLSARIRRRLYYGWDLETDCSLEELSSPVADITVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERSFLSAMDWRLYTDPREIFEVLSWLESCVAEQQGRRRGWYTYTDLCVLLEQPMWQLSLGSLCQRLVKLSCLLAVAYVSSVALAVASMAVIHQSLGLSSSPSPSPPELTLVPKNLLQPCIPAPVPQCLTNVSSCLEDSVELPSLWGSLLDPLTPPLMPPPDPPAPPTPFHKCPFCQKFQRNPPNCRACHQPNRTVSIGPIHPFYHTHGLAPPWLWSPVAPPFLQPQQCSLFSVMKLARLTSVIFPG", "length": 408 }, "evidence": [ { "id": "F1SRW4", "url": "https://omabrowser.org/oma/group/F1SRW4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8K158-1", "protein_name": "Protein CNPPD1", "gene_name": "Cnppd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLTGLLLDEEGAFSLTGFQDFMVLPGHQKLSARIRRRLYYGWDLETDCSLEELSSPVADITVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVATLNALERSFLSAMDWRLYTDPREIFEVLSWLESCVAEQQGRRRGWYTYTDLCVLLEQPTWQLALGSLCQRLVKLSCLLAVAYVSSVALAVASVAVIHQSLGLSSSPSPGPPELTLVSKSLVQPCVPAPVSQCLTNVSSCLEGSVDLPSLWGSLLAPLTPPLRPPPDPPAPPTPLHKCPLCQKFQRLPPNCRACHTNQTVSIGPSRPLYHARGLAPPWLWSPVAPPFLQPQQCSLFSVMELAHLKSVISPG", "length": 407 }, "evidence": [ { "id": "F1SRW4", "url": "https://omabrowser.org/oma/group/F1SRW4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BV87-1", "protein_name": "Protein CNPPD1", "gene_name": "CNPPD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDLTGLLLDEEGTFSLAGFQDFTFLPGHQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERGFLSAMDWHLYTDPREIFEVLSWLESCVAEQQGRWRGWYTYTDLCVLLEQPTWQLALGSLCQRLVKLSCLLAVAYVSSVALAVASVAVIHQSLGLSCIPTPGPPDLGLTSRCLLEPCIPSVPQCLPSLANVSSCLEGSMGLRSLWGSLLASLTPPPLPPPDPPAPPTLLHNCHLCQKLQRDSPTCHACLHPNRTVPTALSSPWYHTYGLAPPWPWSPVLLSLPQPQQCSLFSVMELARLKSFVFPG", "length": 410 }, "evidence": [ { "id": "F1SRW4", "url": "https://omabrowser.org/oma/group/F1SRW4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SRW4", "url": "https://www.uniprot.org/uniprotkb/F1SRW4" } ], "pmid": "" }, { "name": "cyclin-dependent protein kinase holoenzyme complex", "id": "GO:0000307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000307", "evidence": [ { "database": "UniProtKB", "id": "F1SRW4", "url": "https://www.uniprot.org/uniprotkb/F1SRW4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "F1SRW4", "url": "https://www.uniprot.org/uniprotkb/F1SRW4" } ], "pmid": "" }, { "name": "cyclin-dependent protein serine/threonine kinase regulator activity", "id": "GO:0016538", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016538", "evidence": [ { "database": "UniProtKB", "id": "F1SRW4", "url": "https://www.uniprot.org/uniprotkb/F1SRW4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 295, "end_pos": 297, "annotation": "n_glycosylation_sequon" }, { "start_pos": 357, "end_pos": 359, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 295, "end_pos": 297 }, { "start_pos": 357, "end_pos": 359 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SRX4-1", "uniprot_ac": "F1SRX4", "uniprot_id": "F1SRX4_PIG", "mass": { "chemical_mass": 35820.0, "monoisotopic_mass": 35820.0 }, "refseq": { "ac": "XP_001928273", "name": "lysM and putative peptidoglycan-binding domain-containing protein 4 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928273" }, "gene_names": [ { "name": "LYSMD4", "type": "recommended", "evidence": [ { "id": "F1SRX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRX4" } ] }, { "name": "LYSMD4", "type": "synonym", "evidence": [ { "id": "XP_001928273", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928273" } ] } ], "protein_names": [ { "name": "LysM and putative peptidoglycan-binding domain-containing protein 4", "type": "recommended", "evidence": [ { "id": "F1SRX4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SRX4/entry#names_and_taxonomy" } ] }, { "name": "lysM and putative peptidoglycan-binding domain-containing protein 4 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_001928273", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928273" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SRX4", "url": "https://www.uniprot.org/uniprotkb/F1SRX4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LYSMD4", "url": "https://www.uniprot.org/uniprotkb/F1SRX4", "locus": { "chromosome": "1", "start_pos": 138560995, "end_pos": 138567562, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030487", "url": "https://www.ensembl.org/id/ENSSSCG00000030487" } ] } } ], "crossref": [ { "id": "F1SRX4", "url": "https://alphafold.ebi.ac.uk/entry/F1SRX4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030487", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030487", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00118", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00118", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100152655", "url": "https://www.ncbi.nlm.nih.gov/gene/100152655", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR018392", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018392", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036779", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036779", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045030", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045030", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100152655", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100152655", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SRX4", "url": "https://www.orthodb.org/?gene=F1SRX4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR20932", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20932", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20932:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20932:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_001928273", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001928273", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R7Z8", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Z8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7Z8-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7Z8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRX4", "url": "https://www.uniprot.org/uniprotkb/F1SRX4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SRX4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRX4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGCGGGSSGDGFRLIPDVRCPALREGIRGPVKKMRQKGVLTKTFRGPASVCRTPTSHVYMFENGSGDSGDSSEEESHRVALRPRGKERQKKGAHQSHQPGAGDVVLLQRELAQEDSLNTLALQYGCKVADIKKVNNFIREQDLYALKSIKIPVKNHGILTETCKELRPLLSSSTETRVTFEEQPDPDRVAVGANAPSSPLTEFFKGIDQNIEHAVQSEIFLSESYCLGTSSQPLLPAPPKTSTSGADCGIQWWNAVFIMLLIGIVLPVFYLVYFKIQATSEIPSSLNTTAVPNGSMIMSAVPEQAPKLVIPGPTIPSSDSQFSQTIHRGN", "length": 330, "header": "tr|F1SRX4-1|F1SRX4_PIG Isoform 1 of LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Sus scrofa OX=9823 GN=LYSMD4 PE=4 SV=2 CANONICAL=F1SRX4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R7Z8-1", "url": "https://www.uniprot.org/uniprotkb/F1SRX4/entry#A0A5G2R7Z8-1", "sequence": { "sequence": "MCCQFVILGKGVISNKDTIIIIKKMRQKGVLTKTFRGPASVCRTPTSHVYMFENGSGDSGDSSEEESHRVALRPRGKERQKKGAHQSHQPGAGDVVLLQRELAQEDSLNTLALQYGCKVADIKKVNNFIREQDLYALKSIKIPVKNHGILTETCKELRPLLSSSTETRVTFEEQPDPDRVAVGANAPSSPLTEFFKGIDQNIEHAVQSEIFLSESYCLGTSSQPLLPAPPKTSTSGADCGIQWWNAVFIMLLIGIVLPVFYLVYFKIQATSEIPSSLNTTAVPNGSMIMSAVPEQAPKLVIPGPTIPSSDSQFSQTIHRGN", "length": 321, "header": "tr|A0A5G2R7Z8-1|A0A5G2R7Z8_PIG Computationally mapped isoform of LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Sus scrofa OX=9823 GN=LYSMD4 PE=4 SV=1 CANONICAL=F1SRX4-1" }, "locus": { "chromosome": "1", "start_pos": 138566392, "end_pos": 138562803, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074702.1", "url": "https://www.ensembl.org/id/ENSSSCT00000074702.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072446.1", "url": "https://www.ensembl.org/id/ENSSSCP00000072446.1" } ] } }, { "isoform_ac": "F1SRX4-1", "url": "https://www.uniprot.org/uniprotkb/F1SRX4/entry#F1SRX4-1", "sequence": { "sequence": "MGCGGGSSGDGFRLIPDVRCPALREGIRGPVKKMRQKGVLTKTFRGPASVCRTPTSHVYMFENGSGDSGDSSEEESHRVALRPRGKERQKKGAHQSHQPGAGDVVLLQRELAQEDSLNTLALQYGCKVADIKKVNNFIREQDLYALKSIKIPVKNHGILTETCKELRPLLSSSTETRVTFEEQPDPDRVAVGANAPSSPLTEFFKGIDQNIEHAVQSEIFLSESYCLGTSSQPLLPAPPKTSTSGADCGIQWWNAVFIMLLIGIVLPVFYLVYFKIQATSEIPSSLNTTAVPNGSMIMSAVPEQAPKLVIPGPTIPSSDSQFSQTIHRGN", "length": 330, "header": "tr|F1SRX4-1|F1SRX4_PIG Isoform 1 of LysM and putative peptidoglycan-binding domain-containing protein 4 OS=Sus scrofa OX=9823 GN=LYSMD4 PE=4 SV=2 CANONICAL=F1SRX4-1" }, "locus": { "chromosome": "1", "start_pos": 138567555, "end_pos": 138562803, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025768.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025768.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000028227.2", "url": "https://www.ensembl.org/id/ENSSSCP00000028227.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { 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"F1SS10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ] }, { "name": "ZNF770", "type": "synonym", "evidence": [ { "id": "XP_003121680", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121680" } ] } ], "protein_names": [ { "name": "Zinc finger protein 770", "type": "recommended", "evidence": [ { "id": "F1SS10", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SS10/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 770", "type": "synonym", "evidence": [ { "id": "XP_003121680", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121680" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF770", "url": "https://www.uniprot.org/uniprotkb/F1SS10", "locus": { "chromosome": "1", "start_pos": 136130061, "end_pos": 136121111, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004799", "url": "https://www.ensembl.org/id/ENSSSCG00000004799" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004799", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004799", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514616", "url": "https://www.ncbi.nlm.nih.gov/gene/100514616", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514616", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514616", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SWQKHFQ", "url": "https://omabrowser.org/oma/group/SWQKHFQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SS10", "url": "https://www.orthodb.org/?gene=F1SS10", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23226", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23226", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23226:SF416", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23226:SF416", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003121680", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121680", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SS10-1", "url": "https://www.uniprot.org/uniprotkb/F1SS10-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMAENNFKMLKIQQCVVANKLPRNRPYICNICFKHFETPSKLARHYLIHTGQKPFECDVCHKTFRQLVHLERHQLTHNLPFKCSICQHHFKNLKTFVKHQQLHNETYQNDVKQVRRLLDAKQEKPVYGMYHSFTTEERWALHPHSKSDPTYSPTKKKKNIHACTICGKMFPSQSKLDRHALIHTGQRPFKCVLCNKSFRQSTHLKIHQLTHSEDRPFQCCFCQKGFKIQSKLLKHKQIHTRNKSFPTLSLNVKSAESCPLPNKLNAKQDGSENGDIGETEENNQLDVHSIYIVPFQCPECEECFESEQILKGHKCFPARSGKIPSRLKRSYNYKTIVKKILAKFKHAGGKKFDNFRSEKKIFKNSFLKKCDLISDEQSSEQTQKTFMGSLGKRGTYKTAVNKRKKTLALPFSWQKHFQSQNMGKNFKGILTPENVLTMDNSVINKDISTYGSSGEEFFDNCEVLQCGFSVPSENIHTGHKICPCDKCEKVFPSVSKLQRHYLIHTGQRPFDCNVCGKSFRQSAHLKRHKLTHIDKIPYRKSLCQVEFVQENLNKLFVHQGDNVNYNASQQCQTLGFQKYEVSESDQISEVKAESEDFIVGPPYRNRQPYLSSVLLESEQSCHNHCCSYSGRTERNDGLLYQCSVCSKSFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKRHQLTHFKE", "length": 693, "header": "tr|F1SS10-1|F1SS10_PIG Isoform 1 of Zinc finger protein 770 OS=Sus scrofa OX=9823 GN=ZNF770 PE=3 SV=1 CANONICAL=F1SS10-1" }, "isoforms": [ { "isoform_ac": "F1SS10-1", "url": "https://www.uniprot.org/uniprotkb/F1SS10/entry#F1SS10-1", "sequence": { "sequence": "MMAENNFKMLKIQQCVVANKLPRNRPYICNICFKHFETPSKLARHYLIHTGQKPFECDVCHKTFRQLVHLERHQLTHNLPFKCSICQHHFKNLKTFVKHQQLHNETYQNDVKQVRRLLDAKQEKPVYGMYHSFTTEERWALHPHSKSDPTYSPTKKKKNIHACTICGKMFPSQSKLDRHALIHTGQRPFKCVLCNKSFRQSTHLKIHQLTHSEDRPFQCCFCQKGFKIQSKLLKHKQIHTRNKSFPTLSLNVKSAESCPLPNKLNAKQDGSENGDIGETEENNQLDVHSIYIVPFQCPECEECFESEQILKGHKCFPARSGKIPSRLKRSYNYKTIVKKILAKFKHAGGKKFDNFRSEKKIFKNSFLKKCDLISDEQSSEQTQKTFMGSLGKRGTYKTAVNKRKKTLALPFSWQKHFQSQNMGKNFKGILTPENVLTMDNSVINKDISTYGSSGEEFFDNCEVLQCGFSVPSENIHTGHKICPCDKCEKVFPSVSKLQRHYLIHTGQRPFDCNVCGKSFRQSAHLKRHKLTHIDKIPYRKSLCQVEFVQENLNKLFVHQGDNVNYNASQQCQTLGFQKYEVSESDQISEVKAESEDFIVGPPYRNRQPYLSSVLLESEQSCHNHCCSYSGRTERNDGLLYQCSVCSKSFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKRHQLTHFKE", "length": 693, "header": "tr|F1SS10-1|F1SS10_PIG Isoform 1 of Zinc finger protein 770 OS=Sus scrofa OX=9823 GN=ZNF770 PE=3 SV=1 CANONICAL=F1SS10-1" }, "locus": { "chromosome": "1", "start_pos": 136127731, "end_pos": 136125653, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087813.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087813.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066046.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066046.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514616", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514616", "resource": "KEGG Pathway" }, { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XNR3-1", "protein_name": "Zinc finger protein 770", "gene_name": "ZNF770", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLRIQHCVTANRIPKKKPHICDICYKQFETPSKLARHYLIHTGQKPFECHVCYKTFRQLVHLERHQLTHNLPFKCNFCHRHFKNVITLLKHQQLHNEKYQNCIKQEEKSVSSEQDGVTCGIFRCSVCWKSFTTEERWMLHQCQKADCLHGTRRRMKTHPCELCNKTFPSRSKLERHFLIHTGQKPFKCSSCGKSFRQSTHLKIHQLMHTEERPFQCCFCQKGFKIQSKLMKHKQLHARNKSVSNIIYKGKTKHLRPQKLSEGRMDSFENADTFKLQENDPHDVYLIYVVPFQCPVCEQCFETEEVLNLHKCYLRDEKSPSCTTACSRTVSMKSKILMKLKRTGGKLSDFSVTGREKMKSGHLRSPDLLAVREQQSDMNASTKSFRDCCSKRDLCKAVNWMKRRFAVPLLWQEHLEPLKVGINLDGVLTGESMLSISDGVRNRDDAFYGSSDDGFFDNSEILHYAFSAPSKNTHNRHKVCKCDRCEKIFPSSSKLQRHYLIHTGQKPFGCNVCGKTFRQSAHLKRHQLTHTENNYKTPVCQVEFGNLNKFFNHQEDHIEFESSPPVSYSDYSQAPSQAPGFQEFELTQSNQAAEIKVEIESGAFVLDTGSRNTEPYLCSKLMETEQSCYSYWHDFSESIERRKLYQCSLCFKTFKSFSKLERHYFMHAGQKPFECSVCGKSFRQSPHLKRHHLTHFKERLKLSSSQQQSEDTLFSLNLDTVP", "length": 721 }, "evidence": [ { "id": "F1SS10", "url": "https://omabrowser.org/oma/group/F1SS10/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1M076-1", "protein_name": "Zinc finger protein 770", "gene_name": "Zfp770", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAENSFKMLKIQQCVANKLPRNRPYICNICFKHFETPSKLARHYLIHTGQKPFECDACHKNFRQLVHLERHQLTHNLPFSCNICQRHFKNLKTFVRHQQLHNESCHSDIKVRRLLETKQEKPVYGAYSAFTADERRALHPCSKSDPTYSTTERRKNIHACTICGKMFPSQSKLDRHALIHTGQRPFKCVLCSKSFRQSTHLKIHQLTHSEERPFQCCFCQKGFKIQSKLLKHKQIHTRNKTFQNLPLKVKSPESCPLPNKLNAKQDAFESGDMGESEEKNPLDVHSIYIVPFQCSECEECFESEQILNGHKCLPARGGRIPGRLKRSCNYKTIVKKLLAKLKRAGGKKSDNLQSEKRTFKSNCLKNCECTSGKANMEQTQRTFVGSLSRHGSYKTVSKKKKTLTLPFSWQKQFQSQNMGKSLQGILKTGSILTMDGSVSNKDLSIYGSSGEEYFNNCDMLQCGFSDSSENIHTGQKMCPCDKCDKVFPSISKLQRHYLIHTGQRPFGCNVCGKSFRQSAHLKRHKLTHIEKIPYSSFWQVDFGNVNKLFIHPSDDVSYSASQQCEGLGSQRYESSESNQVSETEVKEESEEFILGDHCRNRQSYLASTLLESEQSRHCYTYLGRPERSDGLLYQCSVCCKHFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKRHQLTHFKERPQEKVVLDSTVT", "length": 699 }, "evidence": [ { "id": "F1SS10", "url": "https://omabrowser.org/oma/group/F1SS10/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MPW3-1", "protein_name": "Zinc finger protein 770", "gene_name": "ZNF770", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MMAENNFKMLKIQQCVAAANKLPRNRPYICNICFKHFETPSKLARHYLIHTGQKPFECDVCHKTFRQLVHLERHQLTHNLPFKCSICQRHFKNLKTFVKHQQLHDETYQNDVKQVRRLLEAKQEKPVYGMYHTFTPEERWALHPCSKSDPSKKKKDIHACTICGKMFPSQSKLDRHALIHTGQRPFKCVLCSKSFRQSTHLKIHQLTHSEERPFQCCFCQKGFKIQSKLLKHKQIHTRNKTFQTLSLKVKSSESCSLPNKLNAKQDGFENGNIGASEENNQLDVHSVYIVPFQCPECEECFESEQILKGHKCFPARSGKIPSKLKSSYNYKTIVKKILAKLKRAGGKKLDNFQADKKVFKNTFMKNHDLISGEQRPEQTQRTCLSSLGKHGTYKTVGNKKKTLTLPFSWQKHCQTQNVGKNVKGILTPENMLTMDNPVHKKDISIYGSSGEEFFENCQVLQCGFSVPSGNIHTGHKMCPCDKCEKVFPSVSKLQRHYLIHTGQRPFGCNVCGKSFRQSAHLKRHKLTHIDKLPYRKSLCQVELENFNKLLIHQGDNVSYSASQQCQTLGFQKYKVSESDQMSEIKVKAESEDFILGAPCRSREPYLSSTLLESEQNHHSHCSYSGRAERNDGLLYQCSVCSKSFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKRHQLTHFKE", "length": 688 }, "evidence": [ { "id": "F1SS10", "url": "https://omabrowser.org/oma/group/F1SS10/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6IQ21-1", "protein_name": "Zinc finger protein 770", "gene_name": "ZNF770", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMAENNLKMLKIQQCVVANKLPRNRPYVCNICFKHFETPSKLARHYLIHTGQKPFECDVCHKTFRQLVHLERHQLTHSLPFKCSICQRHFKNLKTFVKHQQLHNETYQNNVKQVRRLLEAKQEKSMYGVYNTFTTEERWALHPCSKSDPMYSMKRRKNIHACTICGKMFPSQSKLDRHVLIHTGQRPFKCVLCTKSFRQSTHLKIHQLTHSEERPFQCCFCQKGFKIQSKLLKHKQIHTRNKAFRALLLKKRRTESRPLPNKLNANQGGFENGEIGESEENNPLDVHSIYIVPFQCPKCEKCFESEQILNEHSCFAARSGKIPSRFKRSYNYKTIVKKILAKLKRARSKKLDNFQSEKKVFKKSFLRNCDLISGEQSSEQTQRTFVGSLGKHGTYKTIGNRKKKTLTLPFSWQNMGKNLKGILTTENILSIDNSVNKKDLSICGSSGEEFFNNCEVLQCGFSVPRENIRTRHKICPCDKCEKVFPSISKLKRHYLIHTGQRPFGCNICGKSFRQSAHLKRHEQTHNEKSPYASLCQVEFGNFNNLSNHSGNNVNYNASQQCQAPGVQKYEVSESDQMSGVKAESQDFIPGSTGQPCLPNVLLESEQSNPFCSYSEHQEKNDVFLYRCSVCAKSFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKRHQLTHFKERPQGKVVALDSVM", "length": 691 }, "evidence": [ { "id": "F1SS10", "url": "https://omabrowser.org/oma/group/F1SS10/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BIQ8-1", "protein_name": "Zinc finger protein 770", "gene_name": "Znf770", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPLRNVMAENNFKMLKIQQCVANKLPRNRPYICNICFKHFETPSKLARHYLIHTGQKPFECDVCHKNFRQLVHLERHQLTHNLPFSCNICQRHFKNLKTFVKHQQLHNESYHNDVKVRRLLETKQEKPVYGMCNTFTADERWALHPCSKSDATYSTTKRRKNIHACTICGKMFPSQSKLDRHSLIHTGQRPFKCVLCSKSFRQSTHLKIHQLTHSEERPFQCCFCQKGFKIQSKLLKHKQIHTRNKTLQNLPLKVKSPESCPLPNKLNAKQDAFESGDMGESEENNPLDVHSIYIVPFQCSECEECFESEQILNGHKCLPARGGRVPSRLKRSCNYKTIVKKLLAKLKRAGGKKSDDLQSEKKRTFKSNYLKNCERSSGKPNIEQTQRTFVGSLSRHGSYKTVSKKKKKTLALPFSWQKQFQSQNTGKSLQGILTTGSILSMDGSVNNKDLSIYGSSGEEYLNCDMLQCGFSDSSENIHTGHKMCPCDKCDKVFPSISKLQRHYLIHTGQRPFDCNVCGKSFRQSAHLKRHKLTHIEKIPYSSFWRVDFGNVNQLFIHPSDDVSYNASQQCEGLGSQSCESSESSQVSEIEVKVEPEDFLLGSHCRSRQSYLANALVESEQSHHCYSYLGRPERSDGLLYQCSVCCKHFRSPSKLERHYLIHAGQKPFECSVCGKTFRQAPHWKRHQLTHFKERPQEKVVLDSTV", "length": 705 }, "evidence": [ { "id": "F1SS10", "url": "https://omabrowser.org/oma/group/F1SS10/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ], "pmid": "" }, { "name": "transcription cis-regulatory region binding", "id": "GO:0000976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000976", "evidence": [ { "database": "UniProtKB", "id": "F1SS10", "url": "https://www.uniprot.org/uniprotkb/F1SS10" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 104, "end_pos": 106, "annotation": "n_glycosylation_sequon" }, { "start_pos": 195, "end_pos": 197, "annotation": "n_glycosylation_sequon" }, { "start_pos": 242, "end_pos": 244, "annotation": "n_glycosylation_sequon" }, { "start_pos": 566, "end_pos": 568, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], 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"database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44668", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44668", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44668:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44668:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00106", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00106", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003132036", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003132036", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKE7", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKE7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKE7-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKE7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FF55", "url": 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CANONICAL=F1SS86-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKE7-1", "url": "https://www.uniprot.org/uniprotkb/F1SS86/entry#A0A286ZKE7-1", "sequence": { "sequence": "MPLPIIPQAKMGVTAVLVLPLLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECARVFHTGGARLVLCGKNWERLQTLYDALISVADPSKTFTPKLVLLDLSDISCVQDVAKEVLDCYGCVDILISNASMKVKGPAHKISLELDKKIMDANYFGPITLTKALLPNMISRRTGQIVLVNNIQGRLGIPFRTAYAASKHAALGFFDCLRAEVEEFDVVVSTVSPTFIRSYHVDPGQGNWEASVWKFFFRKLTYGAHPVDVAEEVMRTVRRKKQEVFLANPIPRAAIGHKTTGSPKSHYQHR", "length": 308, "header": "tr|A0A286ZKE7-1|A0A286ZKE7_PIG Computationally mapped isoform of Dehydrogenase/reductase SDR family member 7C OS=Sus scrofa OX=9823 GN=DHRS7C PE=1 SV=1 CANONICAL=F1SS86-1" }, "locus": { "chromosome": "12", "start_pos": 54661100, "end_pos": 54641181, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060496.2", "url": "https://www.ensembl.org/id/ENSSSCT00000060496.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032046.1", "url": 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"ENSSSCP00000077947.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077947.1" } ] } }, { "isoform_ac": "F1SS86-1", "url": "https://www.uniprot.org/uniprotkb/F1SS86/entry#F1SS86-1", "sequence": { "sequence": "MGVTAVLVLPLLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECARVFHTGGARLVLCGKNWERLQTLYDALISVADPSKQTFTPKLVLLDLSDISCVQDVAKEVLDCYGCVDILISNASMKVKGPAHKISLELDKKIMDANYFGPITLTKALLPNMISRRTGQIVLVNNIQGRLGIPFRTAYAASKHAALGFFDCLRAEVEEFDVVVSTVSPTFIRSYHVDPGQGNWEASVWKFFFRKLTYGAHPVDVAEEVMRTVRRKKQEVFLANPIPRAAMYVRTFFPEFFFAVVACGVKEKLNVPEEG", "length": 312, "header": "tr|F1SS86-1|F1SS86_PIG Isoform 1 of Dehydrogenase/reductase SDR family member 7C OS=Sus scrofa OX=9823 GN=DHRS7C PE=1 SV=4 CANONICAL=F1SS86-1" }, "locus": { "chromosome": "12", "start_pos": 54661070, "end_pos": 54647830, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019585.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019585.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019066.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019066.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SS86", "url": "https://www.uniprot.org/uniprotkb/F1SS86" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": 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"length": 1110, "header": "tr|F1SS87-1|F1SS87_PIG Isoform 1 of ubiquitinyl hydrolase 1 OS=Sus scrofa OX=9823 GN=USP43 PE=4 SV=3 CANONICAL=F1SS87-1" }, "isoforms": [ { "isoform_ac": "F1SS87-1", "url": "https://www.uniprot.org/uniprotkb/F1SS87/entry#F1SS87-1", "sequence": { "sequence": 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"length": 1110, "header": "tr|F1SS87-1|F1SS87_PIG Isoform 1 of ubiquitinyl hydrolase 1 OS=Sus scrofa OX=9823 GN=USP43 PE=4 SV=3 CANONICAL=F1SS87-1" }, "locus": { "chromosome": "12", "start_pos": 54641113, "end_pos": 54584542, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019584.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019584.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019065.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019065.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 211, "start_aa": "Thr", "end_pos": 211, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr211", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SS87", "url": "https://www.uniprot.org/uniprotkb/F1SS87" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5656169", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5656169", "resource": "Reactome", "description": "Termination of translesion DNA synthesis" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SS87", "url": "https://www.uniprot.org/uniprotkb/F1SS87" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SS87", "url": "https://www.uniprot.org/uniprotkb/F1SS87" } ], "pmid": "" }, { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "F1SS87", "url": "https://www.uniprot.org/uniprotkb/F1SS87" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "F1SS87", "url": "https://www.uniprot.org/uniprotkb/F1SS87" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 866, "end_pos": 868, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "R-SSC-5653780", "name": "USP43 binds ISG:K164,ISG:K168-PCNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "nucleoplasm", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-5653780", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5653780" } ] }, { "id": "R-SSC-5653786", "name": "USP43 deISGylates ISG:K164,ISG:K168-PCNA", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. 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"F1SSA4", "url": "https://www.orthodb.org/?gene=F1SSA4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21683", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21683", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21683:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21683:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13863", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13863", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231006", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231006", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SSA4", "url": "https://www.uniprot.org/uniprotkb/F1SSA4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSA4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSA4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKE9", "url": "https://www.uniprot.org/uniprotkb/I3LKE9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKE9-1", "url": "https://www.uniprot.org/uniprotkb/I3LKE9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLGIMEEEDLAEYFRLQYGERLLQLLQKFPSIEDESDSPSVRLLEKKKEAKIMHHAMEQKKETFQRRMETLNLRWEELGVKEAQLKAHIQKFEQFIQENDQKRIRALKKANKERELKRQRMRELAKAKQEMAALRLEHQRLSARLQEYSIFNKFLEKVVENSEFEEIHEVIARYKTLVSMHHDLMQAAQEGQEKIERAKARLARYKEEKDDEILQHNNELARLQMRFDRARSDVIIWESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKQLKEATFVSLEDTHKQLDMIQQFIQDLSDIWAEVKKKEQQQVRV", "length": 316, "header": "tr|F1SSA4-1|F1SSA4_PIG Isoform 1 of Coiled-coil domain containing 42 OS=Sus scrofa OX=9823 GN=CCDC42 PE=4 SV=1 CANONICAL=F1SSA4-1" }, "isoforms": [ { "isoform_ac": "F1SSA4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSA4/entry#F1SSA4-1", "sequence": { "sequence": "MSLGIMEEEDLAEYFRLQYGERLLQLLQKFPSIEDESDSPSVRLLEKKKEAKIMHHAMEQKKETFQRRMETLNLRWEELGVKEAQLKAHIQKFEQFIQENDQKRIRALKKANKERELKRQRMRELAKAKQEMAALRLEHQRLSARLQEYSIFNKFLEKVVENSEFEEIHEVIARYKTLVSMHHDLMQAAQEGQEKIERAKARLARYKEEKDDEILQHNNELARLQMRFDRARSDVIIWESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKQLKEATFVSLEDTHKQLDMIQQFIQDLSDIWAEVKKKEQQQVRV", "length": 316, "header": "tr|F1SSA4-1|F1SSA4_PIG Isoform 1 of Coiled-coil domain containing 42 OS=Sus scrofa OX=9823 GN=CCDC42 PE=4 SV=1 CANONICAL=F1SSA4-1" }, "locus": { "chromosome": "12", "start_pos": 53883929, "end_pos": 53869754, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019575.4", "url": "https://www.ensembl.org/id/ENSSSCT00000019575.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019057.1", "url": "https://www.ensembl.org/id/ENSSSCP00000019057.1" } ] } }, { "isoform_ac": "I3LKE9-1", "url": "https://www.uniprot.org/uniprotkb/F1SSA4/entry#I3LKE9-1", "sequence": { "sequence": "MSLGIMEEEDLAEYFRLQYGERLLQLLQKFPSIEDESDSPSVRLLEKKKEAKIMHHAMEQKKETFQRRMETLNLRWEELGVKEAQLKAHIQKFEQFIQENDQKRIRALKKANKERELKRQRMRELAKAKQEMAALRLEHQRLSARLQEYSIFNKFLEKVVENSEESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKQLKEATFVSLEDTHKQLDMIQQFIQDLSDIWAEVKKKEQQQVRV", "length": 242, "header": "tr|I3LKE9-1|I3LKE9_PIG Computationally mapped isoform of Coiled-coil domain containing 42 OS=Sus scrofa OX=9823 GN=CCDC42 PE=4 SV=3 CANONICAL=F1SSA4-1" }, "locus": { "chromosome": "12", "start_pos": 53883929, "end_pos": 53869754, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022469.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022469.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024563.3", "url": "https://www.ensembl.org/id/ENSSSCP00000024563.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSA4", "url": "https://www.uniprot.org/uniprotkb/F1SSA4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514007", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514007", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A6QQM8-1", "protein_name": "Coiled-coil domain-containing protein 42", "gene_name": "CCDC42", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSLGIMEEEDLAEYFRLQYGERLLQLLQKFPSIEDQSDSPSVRLLEKKKEAKIMHHAMEQKKETFQRRMETLNLRWEELGIKEAQLKAHIQKFEQFIQENDQKRIRALKKANKERELKRQRMRELAKAKQEMAVLRLEHQRLSAKLQEYSIFNKYLEKVVENSEFEEIHEVIARYKTLVSMHHDLMQSAQEGQEKIERAKARLARYKEEKDDEILQHNNELARLQMRFDRARSDVIIWESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKQLKEATFVSLEDTHKQLDMIQQFIQDLSDIWAEVKKKELQQIRV", "length": 316 }, "evidence": [ { "id": "F1SSA4", "url": "https://omabrowser.org/oma/group/F1SSA4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "D3ZAZ8-1", "protein_name": "Coiled-coil domain containing 42", "gene_name": "Ccdc42", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLGMMEEEDLAEYFRLQYGERLLQLLQKFPNVEEQSDSPSIRLLEKKKEAKVMQEAMEHKKETFQRRMETLNLRWEELGIKEEQLKAHIQKFEQFIQENDQKRIRALKKANKERELKRQRLRELAKAKQEMTALRLEHQKLSVKLQDYAIFNKYLEKVVENSEFEEIHEVIARYKTLVSMHHDLMQSAQEGQEKIEHAKARLARYMEEKDDEILQHNNELARLQMRFDRARSDVIFWESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKQLKESTQVSLEDTHKQLDMIQQFIQDLSDIWTEVKKKEQLQIRV", "length": 316 }, "evidence": [ { "id": "F1SSA4", "url": "https://omabrowser.org/oma/group/F1SSA4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5SV66-1", "protein_name": "Coiled-coil domain-containing protein 42", "gene_name": "Ccdc42", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSLGMMEEEDLAEYFRLQYGERLLQLLQKFPNVEEQSDSPSIQLLEKKKEAKIMQEAMEHKKEAFQRRMETLNLRWEELGIKEEQLKAHIQKFEQFIQENDQKRIRALKKANKERELKRLRLRELAKAKQEMMALRLEHQKLSVKLQDYAIFNKYLEKVVENSEFEEIHEVIARYKTLVSMHHDLMQSAQEGQEKIERAKARLARYMEEKDDEILQHNNELARLQMRFDRARSDVIFWESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKQLKESTQVSLEDTHKQLDMIQQFIQDLSDIWTEVKKKEQQQVRM", "length": 316 }, "evidence": [ { "id": "F1SSA4", "url": "https://omabrowser.org/oma/group/F1SSA4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96M95-1", "protein_name": "Coiled-coil domain-containing protein 42", "gene_name": "CCDC42", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLGIMEEEDLAEYFRLQYGERLLQMLQKLPNVEGASESPSIWLLEKKKETEIMHQTMVQKKKMFQRRMETLNLRWEELGVKEAQLKAHIQKSEQFIQENDQKRIRAMKKANKERELKCQHMQELTKRKQEMVALRLEHQRLSAKLKDYYIFNKYLEKVVENSEFEEIHEVIARYKTLVSMRHDLMQSAQEGQEKIERAKARLARYMEEKDDEILQQNNELARLQMRFDRARSNVIFWESRWAHIQNTAAKKTLLLGTIKMATLNLFQIVSKHLKEVTEVALEDTHKQLDMIQQFIQDRSDIWAEVKKKEQQRVRI", "length": 316 }, "evidence": [ { "id": "F1SSA4", "url": "https://omabrowser.org/oma/group/F1SSA4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VIY3-1", "protein_name": "DUF4200 domain-containing protein", "gene_name": "Dmel\\CG17564", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPRVKPTKKLDVLGNLDLRPEDAVGDYISSKQQNKFFVIPPNSDSAGDSIELIYVNNLREHEAMLKLQEEMLTSAKRQTKLNSARVRNMYKIQERLRRRFIEVNSFIKDCADKKRVAEKTAQAETLNHKELGEGIESFKDSIGELKAFREALKATVQEFQPYEKVLDEVVKVSDIFVSPKDCTDRCDALMLAQVEINKLEHQKLQDIENMRQRMVQITNDAALTVLGLKNDLAKLERSYNESRVQCLRWEKILAKTKDAINNNYMDKERTIDAITNLHRILLRRRDVHSFPARGDLDKVLDAIMGEVEILTGVVKEIESSDPSIKHEEARDKSLC", "length": 335 }, "evidence": [ { "id": "F1SSA4", "url": "https://omabrowser.org/oma/group/F1SSA4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "F1SSA4", "url": "https://www.uniprot.org/uniprotkb/F1SSA4" } ], "pmid": "" }, { "name": "perinuclear region of cytoplasm", "id": "GO:0048471", "url": 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[ { "database": "UniProtKB", "id": "F1SSA4", "url": "https://www.uniprot.org/uniprotkb/F1SSA4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "spermatid development", "id": "GO:0007286", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007286", "evidence": [ { "database": "UniProtKB", "id": "F1SSA4", "url": "https://www.uniprot.org/uniprotkb/F1SSA4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SSA4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSA4" }, { "id": "PF13863", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13863" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF4200", "eco_id": "ECO_0000259", "start_pos": 44, "end_pos": 161, "start_aa": "Leu", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", 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"https://www.uniprot.org/uniprotkb/F1SSC4" } ] }, { "name": "MPLKIP", "type": "synonym", "evidence": [ { "id": "XP_003134951", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134951" } ] } ], "protein_names": [ { "name": "M-phase specific PLK1 interacting protein", "type": "synonym", "evidence": [ { "id": "F1SSC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSC4/entry#names_and_taxonomy" } ] }, { "name": "M-phase-specific PLK1-interacting protein", "type": "synonym", "evidence": [ { "id": "XP_003134951", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134951" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MPLKIP", "url": "https://www.uniprot.org/uniprotkb/F1SSC4", "locus": { "chromosome": "18", "start_pos": 54285820, "end_pos": 54283325, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016768", "url": "https://www.ensembl.org/id/ENSSSCG00000016768" } ] } } ], "crossref": [ { "id": "F1SSC4", "url": "https://alphafold.ebi.ac.uk/entry/F1SSC4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016768", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016768", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518707", "url": "https://www.ncbi.nlm.nih.gov/gene/100518707", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026618", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026618", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028265", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028265", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518707", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518707", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QTTCTGK", "url": "https://omabrowser.org/oma/group/QTTCTGK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SSC4", "url": "https://www.orthodb.org/?gene=F1SSC4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR22446", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22446", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22446:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22446:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15502", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15502", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003134951", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134951", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSC4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSC4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHRQNFRPPTPPYPGPGVGGWGSGSGLRGAPGGGGPRPPSPRDGYGSPHHTSPYGPRSRPYGSGHSPRHGGSFPGGRFGSPSPGGHPGTYARSPAGSQQQFGYSPGPQQTHPQGSPRTSTPFGSGRGREKRMSNELESYFKPSMLEDPWAGLEPVSVVDISQQYSSTQTFTGKKGRYFC", "length": 179, "header": "tr|F1SSC4-1|F1SSC4_PIG Isoform 1 of M-phase specific PLK1 interacting protein OS=Sus scrofa OX=9823 GN=MPLKIP PE=4 SV=3 CANONICAL=F1SSC4-1" }, "isoforms": [ { "isoform_ac": "F1SSC4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSC4/entry#F1SSC4-1", "sequence": { "sequence": "MHRQNFRPPTPPYPGPGVGGWGSGSGLRGAPGGGGPRPPSPRDGYGSPHHTSPYGPRSRPYGSGHSPRHGGSFPGGRFGSPSPGGHPGTYARSPAGSQQQFGYSPGPQQTHPQGSPRTSTPFGSGRGREKRMSNELESYFKPSMLEDPWAGLEPVSVVDISQQYSSTQTFTGKKGRYFC", "length": 179, "header": "tr|F1SSC4-1|F1SSC4_PIG Isoform 1 of M-phase specific PLK1 interacting protein OS=Sus scrofa OX=9823 GN=MPLKIP PE=4 SV=3 CANONICAL=F1SSC4-1" }, "locus": { "chromosome": "18", "start_pos": 54285311, "end_pos": 54283669, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018253.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018253.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017761.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017761.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518707", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518707", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B0V0W7-1", "protein_name": "M-phase-specific PLK1-interacting protein", "gene_name": "mplkip", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MQRPQFRHPRPGSGPRPAGFRSPPPAFDRTGSMFPSPPWAYSTPPPPFGPRFGQCSPNTPPREYGGNRSSSGGGGKYFNDQSPGHTPRRANPSPRGAPFRRSPYESPGRHSGYQGSPRTSTPFGSAHGRDRGTNDMEKYYKPSMLQDPWADLQPISVTQTQSKTSKQSDTSRQGRYYN", "length": 178 }, "evidence": [ { "id": "F1SSC4", "url": "https://omabrowser.org/oma/group/F1SSC4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D3ZVR4-1", "protein_name": "M-phase specific PLK1 interacting protein", "gene_name": "Mplkip", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MHRPNFRPPTPPYPSPGIGGWGGGNNFRGTLGGGPRPPSPRDGYGSPHHTPPCGPRARPYGSSHSPRQGGSFSGARFGSPSPGGYPGSYSRSPAGSQHQFGYSPGQQQTYPQGSPRTSTPFGSGRGREKRMSNELESYFKPSMLEDPWAGLEPVSVVDISQQYSNTQTFTGKKGRYFS", "length": 178 }, "evidence": [ { "id": "F1SSC4", "url": "https://omabrowser.org/oma/group/F1SSC4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8TAP9-1", "protein_name": "M-phase-specific PLK1-interacting protein", "gene_name": "MPLKIP", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQRQNFRPPTPPYPGPGGGGWGSGSSFRGTPGGGGPRPPSPRDGYGSPHHTPPYGPRSRPYGSSHSPRHGGSFPGGRFGSPSPGGYPGSYSRSPAGSQQQFGYSPGQQQTHPQGSPRTSTPFGSGRVREKRMSNELENYFKPSMLEDPWAGLEPVSVVDISQQYSNTQTFTGKKGRYFC", "length": 179 }, "evidence": [ { "id": "F1SSC4", "url": "https://omabrowser.org/oma/group/F1SSC4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D011-1", "protein_name": "M-phase-specific PLK1-interacting protein", "gene_name": "Mplkip", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRPNFRPPTPPYPSPGIGGWGGGNNFRGALGGGPRPPSPRDGYGSPHHTPPCGPRARPYGSSQSPRHGGNFSGARFGSPSPGGYPGSYSRSPAGSQHQFGYSPGQQQTYPQGSPRTSTPFGSGRGREKRMSNELESYFKPSMLEDPWAGLEPVSVVDISQQYSNTQTFTGKKGRYFS", "length": 178 }, "evidence": [ { "id": "F1SSC4", "url": "https://omabrowser.org/oma/group/F1SSC4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "F1SSC4", "url": "https://www.uniprot.org/uniprotkb/F1SSC4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SSC4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 179, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SSC4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SSC4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SSD1-1", "uniprot_ac": "F1SSD1", "uniprot_id": "F1SSD1_PIG", "mass": { "chemical_mass": 119386.0, "monoisotopic_mass": 119386.0 }, "refseq": { "ac": "XP_020922279", "name": "inversin isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922279" }, "gene_names": [ { "name": "INVS", "type": "recommended", "evidence": [ { "id": "F1SSD1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ] }, { "name": "INVS", "type": "synonym", "evidence": [ { "id": "XP_020922279", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922279" } ] } ], "protein_names": [ { "name": "Inversin", "type": "recommended", "evidence": [ { "id": "F1SSD1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSD1/entry#names_and_taxonomy" } ] }, { "name": "Nephrocystin-2", "type": "synonym", "evidence": [ { "id": "F1SSD1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSD1/entry#names_and_taxonomy" } ] }, { "name": "inversin isoform X4", "type": "synonym", "evidence": [ { "id": "XP_020922279", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922279" } ] } ], "function": [ { "annotation": "Required for normal renal development and establishment of left-right axis. Probably acts as a molecular switch between different Wnt signaling pathways. Inhibits the canonical Wnt pathway by targeting cytoplasmic disheveled (DVL1) for degradation by the ubiquitin-proteasome. This suggests that it is required in renal development to oppose the repression of terminal differentiation of tubular epithelial cells by Wnt signaling. Involved in the organization of apical junctions in kidney cells together with NPHP1, NPHP4 and RPGRIP1L/NPHP8. Does not seem to be strictly required for ciliogenesis.", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1#function" }, { "database": "UniProtKB", "id": "ARBA00059836", "url": "https://www.uniprot.org/uniprotkb/ARBA00059836#function" }, { "database": "UniProtKB", "id": "A0A287AGB3", "url": "https://www.uniprot.org/uniprotkb/A0A287AGB3#function" }, { "database": "UniProtKB", "id": "A0A287BBN1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBN1#function" }, { "database": "UniProtKB", "id": "A0A287AJ26", "url": "https://www.uniprot.org/uniprotkb/A0A287AJ26#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "INVS", "url": "https://www.uniprot.org/uniprotkb/F1SSD1", "locus": { "chromosome": "1", "start_pos": 242059050, "end_pos": 241897764, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005388", "url": "https://www.ensembl.org/id/ENSSSCG00000005388" } ] } } ], "crossref": [ { "id": "F1SSD1", "url": "https://alphafold.ebi.ac.uk/entry/F1SSD1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005388", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005388", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd23767", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd23767", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100155489", "url": "https://www.ncbi.nlm.nih.gov/gene/100155489", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051165", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051165", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24123", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24123", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24123:SF33", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24123:SF33", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198:SF194", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198:SF194", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00612", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00612", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13637", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13637", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020922279", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020922279", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AGB3", "url": "https://www.uniprot.org/uniprotkb/A0A287AGB3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AGB3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGB3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJ26", "url": "https://www.uniprot.org/uniprotkb/A0A287AJ26", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AJ26-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AJ26-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBN1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBN1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBN1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSD1-1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNRSENFFPGSSLASQVHAAAINGDKGALHKLIIGNSALKDKEDQFGRTPLMYCVLADRLDCADTLLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHKSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLNLKSDIDINMADKYGGTALHAAALSGHVSTVELLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAAKKREEEIKRREAEQQKGRLSPDSCRPQAPPHLPSTQSEPHSQSCAPSKQPPCSDTAQGPEQKACRQSPGRETPSRAPQKEQRLSPDFPRTGPRKPREKAREHSKGRSACVHFSPKEESDGNRRPGVSSVEKSRGETVGEQQCDKGKGSLKQPSCVRGAGPDEEGEDPSQATASLPQQDGHRKPSRQQDAAPKAKCASQKRRIQELRGGRRSPAGSSRPGSAKGEAVHAGQSPLHHRTPRNTVTQDKLARGTYSDLPESTEVLRSGVRKLGTSALSEDAQLSKETDPAPGLSGQSVNIDLLSVELRLQIIQRERSRKELFRKKNKAAAVIQRAWRSYQLRKHLSHLLYMKQLGTRDMDRWNRNCMALILYAWRKNLELKPPKAMAVSRTTKSPPKGSSATKLTRHSVLKQIYGSQEGKLRQPTRSSKAHAVLSLNSVSNLPCIHLLDNSGRSKNFSYNLQSANPSKNKTKLRLPMEENCLGTLQ", "length": 1076, "header": "tr|F1SSD1-1|F1SSD1_PIG Isoform 1 of Inversin OS=Sus scrofa OX=9823 GN=INVS PE=4 SV=3 CANONICAL=F1SSD1-1" }, "isoforms": [ { "isoform_ac": "A0A287AGB3-1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1/entry#A0A287AGB3-1", "sequence": { "sequence": "MNRSENFFPGSSLASQVHAAAINGDKGALHKLIIGNSALKDKEDQFGRTPLMYCVLADRLDCADTLLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHKSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLNLKSDIDINMADKYGGTALHAAALSGHVSTVELLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAAKKREEEIKRREAEQQKGRLSPDSCRPQAPPHLPSTQSEPHSQSCAPSKQPPCSDTAQGPEQKACRQSPGRETPSRAPQKEQRLSPDFPRTGPRKPREKAREHSKGRSACVHFSPKEESDGNRRPGVSSVEKSRELRLQIIQRERSRKELFRKKNKAAAVIQRAWRSYQLRKHLSHLLYMKQLGTRDMDRWNRNCMALILYAWRKNLELKPPKAMAVSRTTKSPPKGSSATKLTRHSVLKQIYGSQEGKLRQPTRSSKAHAVLSLNSVSNLPCIHLLDNSGRSKNFSYNLQSANPSKNKTKLRLPMEENCLGTLQ", "length": 907, "header": "tr|A0A287AGB3-1|A0A287AGB3_PIG Computationally mapped isoform of Inversin OS=Sus scrofa OX=9823 GN=INVS PE=4 SV=1 CANONICAL=F1SSD1-1" }, "locus": { "chromosome": "1", "start_pos": 242056469, "end_pos": 241901192, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043815.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043815.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042893.1", "url": "https://www.ensembl.org/id/ENSSSCP00000042893.1" } ] } }, { "isoform_ac": "A0A287AJ26-1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1/entry#A0A287AJ26-1", "sequence": { "sequence": "MKVRLWKISKFKCNLKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHKSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLNLKSDIDINMADKYGGTALHAAALSGHVSTVELLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAAKKREEEIKRREAEQQKGRLSPDSCRPQAPPHLPSTQSEPHSQSCAPSKQPPCSDTAQGPEQKACRQSPGRETPSRAPQKEQRLSPDFPRTGPRKPREKAREHSKGRSACVHFSPKEESDGNRRPGVSSVEKSRELRLQIIQRERSRKELFRKKNKAAAVIQRAWRSYQLRKHLSHLLYMKQLGTRDMDRWNRNCMALILYAWRKNLELKPPKAMAVSRTTKSPPKGSSATKLTRHSVLKQIYGSQEGKLRQPTRSSKAHAVLSLNSVSNLPCIHLLDNSGRSKNFSYNLQSANPSKNKTKLRLPMEENCLGTLQ", "length": 833, "header": "tr|A0A287AJ26-1|A0A287AJ26_PIG Computationally mapped isoform of Nephrocystin-2 OS=Sus scrofa OX=9823 GN=INVS PE=4 SV=2 CANONICAL=F1SSD1-1" }, "locus": { "chromosome": "1", "start_pos": 242056469, "end_pos": 241952581, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053276.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053276.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043890.2", "url": "https://www.ensembl.org/id/ENSSSCP00000043890.2" } ] } }, { "isoform_ac": "A0A287BBN1-1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1/entry#A0A287BBN1-1", "sequence": { "sequence": "MNRSENFFPGSSLASQVHAAAINGDKGALHKLIIGNSALKDKEDQFGRTPLMYCVLADRLDCADTLLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHKSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLNLKSDIDINMADKYGGTALHAAALSGHVSTVELLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAAKKREEEIKRREAEQQKGRLSPDSCRPQAPPHLPSTQSEPHSQSCAPSKQPPCSDTAQGPEQKACRQSPGRETPSRAPQKEQRLSPDFPRTGPRKPREKAREHSKGRSACVHFSPKEESDGNRRPGVSSVEKSRELRLQIIQRERSRKELFRKKNKAAAVIQRAWRSFARPSSSSLLQLDFQLAPQSPLQSPRLGWRLLRSNPQWWWSWMSILGSLFPLEESQAQGRSPTVGCASLGEGQCCQPVAAGTLTLLIWSAWSLQPHPYQLRKHLSHLLYMKQLGTRDMDRWNRNCMALILYAWRKNLELKPPKAMAVSRTTKSPPKGSSATKLTRHSVLKQIYGSQEGKLRQPTRSSKAHAVLSLNSVSNLPCIHLLDNSGRSKNFSYNLQSANPSKNKTKLRLPMEENCLGTLQ", "length": 1004, "header": "tr|A0A287BBN1-1|A0A287BBN1_PIG Computationally mapped isoform of Inversin OS=Sus scrofa OX=9823 GN=INVS PE=4 SV=2 CANONICAL=F1SSD1-1" }, "locus": { "chromosome": "1", "start_pos": 242056469, "end_pos": 241901192, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046324.2", "url": "https://www.ensembl.org/id/ENSSSCT00000046324.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053751.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053751.2" } ] } }, { "isoform_ac": "F1SSD1-1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1/entry#F1SSD1-1", "sequence": { "sequence": "MNRSENFFPGSSLASQVHAAAINGDKGALHKLIIGNSALKDKEDQFGRTPLMYCVLADRLDCADTLLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHKSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLNLKSDIDINMADKYGGTALHAAALSGHVSTVELLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAAKKREEEIKRREAEQQKGRLSPDSCRPQAPPHLPSTQSEPHSQSCAPSKQPPCSDTAQGPEQKACRQSPGRETPSRAPQKEQRLSPDFPRTGPRKPREKAREHSKGRSACVHFSPKEESDGNRRPGVSSVEKSRGETVGEQQCDKGKGSLKQPSCVRGAGPDEEGEDPSQATASLPQQDGHRKPSRQQDAAPKAKCASQKRRIQELRGGRRSPAGSSRPGSAKGEAVHAGQSPLHHRTPRNTVTQDKLARGTYSDLPESTEVLRSGVRKLGTSALSEDAQLSKETDPAPGLSGQSVNIDLLSVELRLQIIQRERSRKELFRKKNKAAAVIQRAWRSYQLRKHLSHLLYMKQLGTRDMDRWNRNCMALILYAWRKNLELKPPKAMAVSRTTKSPPKGSSATKLTRHSVLKQIYGSQEGKLRQPTRSSKAHAVLSLNSVSNLPCIHLLDNSGRSKNFSYNLQSANPSKNKTKLRLPMEENCLGTLQ", "length": 1076, "header": "tr|F1SSD1-1|F1SSD1_PIG Isoform 1 of Inversin OS=Sus scrofa OX=9823 GN=INVS PE=4 SV=3 CANONICAL=F1SSD1-1" }, "locus": { "chromosome": "1", "start_pos": 242056469, "end_pos": 241901192, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005931.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005931.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005784.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005784.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoskeleton", "id": "GO:0005856", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005856", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "pmid": "" }, { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "negative regulation of canonical Wnt signaling pathway", "id": "GO:0090090", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090090", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "pmid": "" }, { "name": "kidney development", "id": "GO:0001822", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001822", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "pmid": "" }, { "name": "Wnt signaling pathway", "id": "GO:0016055", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016055", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "pmid": "" }, { "name": "protein localization to ciliary inversin compartment", "id": "GO:1904108", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904108", "evidence": [ { "database": "UniProtKB", "id": "F1SSD1", "url": "https://www.uniprot.org/uniprotkb/F1SSD1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1046, "end_pos": 1048, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1059, "end_pos": 1061, "annotation": "n_glycosylation_sequon" }, { "start_pos": 232, "end_pos": 234, "annotation": "n_glycosylation_sequon" }, { "start_pos": 246, "end_pos": 248, "annotation": "n_glycosylation_sequon" }, { "start_pos": 277, "end_pos": 279, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2, "end_pos": 4, "annotation": "n_glycosylation_sequon" }, { "start_pos": 74, "end_pos": 76, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SSD1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1076, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SSD1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SSD1" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1046, "end_pos": 1048 }, { "start_pos": 1059, "end_pos": 1061 }, { "start_pos": 232, "end_pos": 234 }, { "start_pos": 246, "end_pos": 248 }, { "start_pos": 277, "end_pos": 279 }, { "start_pos": 2, "end_pos": 4 }, { "start_pos": 74, "end_pos": 76 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SSE3-1", "uniprot_ac": "F1SSE3", "uniprot_id": "F1SSE3_PIG", "mass": { "chemical_mass": 46529.0, "monoisotopic_mass": 46529.0 }, "refseq": { "ac": "XP_003360257", "name": "UPF0415 protein C7orf25 homolog", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003360257" }, "gene_names": [ { "name": "C7orf25", "type": "recommended", "evidence": [ { "id": "F1SSE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSE3" } ] }, { "name": "C18H7orf25", "type": "synonym", "evidence": [ { "id": "XP_003360257", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003360257" } ] } ], "protein_names": [ { "name": "Chromosome 18 C7orf25 homolog", "type": "synonym", "evidence": [ { "id": "F1SSE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSE3/entry#names_and_taxonomy" } ] }, { "name": "UPF0415 protein C7orf25 homolog", "type": "synonym", "evidence": [ { "id": "XP_003360257", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003360257" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SSE3", "url": "https://www.uniprot.org/uniprotkb/F1SSE3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C7orf25", "url": "https://www.uniprot.org/uniprotkb/F1SSE3", "locus": { "chromosome": "18", "start_pos": 51928145, "end_pos": 51924280, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016760", "url": "https://www.ensembl.org/id/ENSSSCG00000016760" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016760", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016760", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100517984", "url": "https://www.ncbi.nlm.nih.gov/gene/100517984", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR010733", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010733", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041076", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041076", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100517984", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517984", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HFCMFQR", "url": "https://omabrowser.org/oma/group/HFCMFQR/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SSE3", "url": "https://www.orthodb.org/?gene=F1SSE3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR13379", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13379", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13379:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13379:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07000", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07000", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18474", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18474", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003360257", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003360257", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SSE3", "url": "https://www.uniprot.org/uniprotkb/F1SSE3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSE3-1", "url": "https://www.uniprot.org/uniprotkb/F1SSE3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAHSMLCERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLTHLRAIVESAENLEEVVSVLHVFGYTDALGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLREMGISVRGDIVAVNSLLDHPEELQLSERESDDEGPELLQVTRVDRENILARVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFVFKEKVLTEQAEQERKEQVLPELEAFMKDKELFACESAVKDFQSILDTLGGPGERERAALLIKRINVVPDQPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPLPKDCTTDSKH", "length": 421, "header": "tr|F1SSE3-1|F1SSE3_PIG Isoform 1 of Chromosome 18 C7orf25 homolog OS=Sus scrofa OX=9823 GN=C7orf25 PE=3 SV=3 CANONICAL=F1SSE3-1" }, "isoforms": [ { "isoform_ac": "F1SSE3-1", "url": "https://www.uniprot.org/uniprotkb/F1SSE3/entry#F1SSE3-1", "sequence": { "sequence": "MSAHSMLCERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLTHLRAIVESAENLEEVVSVLHVFGYTDALGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLREMGISVRGDIVAVNSLLDHPEELQLSERESDDEGPELLQVTRVDRENILARVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFVFKEKVLTEQAEQERKEQVLPELEAFMKDKELFACESAVKDFQSILDTLGGPGERERAALLIKRINVVPDQPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPLPKDCTTDSKH", "length": 421, "header": "tr|F1SSE3-1|F1SSE3_PIG Isoform 1 of Chromosome 18 C7orf25 homolog OS=Sus scrofa OX=9823 GN=C7orf25 PE=3 SV=3 CANONICAL=F1SSE3-1" }, "locus": { "chromosome": "18", "start_pos": 51926683, "end_pos": 51925421, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053788.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053788.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032825.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032825.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSE3", "url": "https://www.uniprot.org/uniprotkb/F1SSE3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517984", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517984", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5P7R3-1", "protein_name": "Chromosome 7 open reading frame 25", "gene_name": "C7orf25", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSVQSLLCERIVVAKELIKRAEALSKFQKRKIEGGAKLCGKLKAELNFLHKVESGKVVIKESHLQSTNLTHLQAIIQSAENLEDVVSVLQVFSYEDRFGNRQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASCQQPVEYSNPHIIFAFYNSVSSPMAERLKEMGISVRGDVVAVSSLVEPSVENQHLSASESDEEGLELQVTRVDRENLVTSIAFPSQIKVNVCNRVNLDITTLITYVSALNYGGCYFLFKEKVLTEQAAQERRERVLPQLEEFMEGKELFACESAVRDFQSILETLGGPGEKKRAALLVKRISVVPDQPSDRALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAAANQGVKFSVFVHQPRALTESKESVATPLPKSCLHDNGL", "length": 421 }, "evidence": [ { "id": "F1SSE3", "url": "https://omabrowser.org/oma/group/F1SSE3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HSF2-1", "protein_name": "UPF0415 protein C7orf25 homolog", "gene_name": "C3H7orf25", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSAHSMLSERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKIEAGKVAIKESHLQSTNLTHLKAIVESAENLEEVVSVLRVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIVFAFYNSVSSPMAEKLKDMGISVRGDIVAVNSLLNHPEELELSESELDDEGQELLQVTRVDRENVLAHVAFPTEIKVDVCKRVNLDITTLITYVSAMSYGGCHFIFKEKVLTEQAEQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERATLLIKRISVVPDQPSERALRLVASSKINSRSLTIFGTGDNLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALAVPLPKDFTNESAH", "length": 421 }, "evidence": [ { "id": "F1SSE3", "url": "https://omabrowser.org/oma/group/F1SSE3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5M888-1", "protein_name": "UPF0415 protein C7orf25 homolog", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAYSMLSERIAMAKELIKRAESLSRSKKGGIEGGAKLCSKLKSELKFLQKIESGKVAIKESHLQSTNLTHLKAIVESAENLEEVVSVLRVFGYTDSLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASRQQPVQYSNPHIVFAFYNSVSSPMADKLKDMGISVRGDIVAVNSLLNHPEEYLLSESESDDEGQELLQVTRVDLDNVLARVAFPTEIKVDVCRRVNLDITTLITYVSAMSYGGCHFIFKEKVLTEQAEQERKERVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERAAVLIKRINVVPDQPSERALKLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALAVPLPKARTNDSAH", "length": 421 }, "evidence": [ { "id": "F1SSE3", "url": "https://omabrowser.org/oma/group/F1SSE3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q803H0-1", "protein_name": "UPF0415 protein C7orf25 homolog", "gene_name": "", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MATYNTLQDRIRVAKELLERVDKICSRQGREVEGRAKLCGKLRAELKFLQKVEAGKVVIKESHLQSTNLTHLKAIVESAESLEKVVSVLHVFAYESPDGQKQTLVVDVVANGGHTWVKSIGRKAEALHNIWQGRGQYGDKSVIRQAEDFLEASQQQPVQYSNPHIIFAFYNGVSSPMADKLKEMGISVRGDIVAVNTIEGGEEEDEEDQEGDHEDLVEEEEDGEDDNDDDSDDTDLMHTRVDRDTIVASLAFPTEVKVDVCNRVNLDITTLITYVSSLSHGNCHFTFKEVVLTEQAAQERQEKVLPRLEEFMKGKELFACQSAVEDFRVILDTLGGPGEKSRAEELLARLKVVPDQPSERTQRLVMSSKVNRRSLMIFGTGDTLRAITMTANSGFVRAAANQGVRFSVFIHQPRALTEGKEWRATPI", "length": 427 }, "evidence": [ { "id": "F1SSE3", "url": "https://omabrowser.org/oma/group/F1SSE3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q91WD4-1", "protein_name": "UPF0415 protein C7orf25 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAYSMLSDRIVMAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKIEAGKVAIKESHLQSTNLTHLKAIVESAENLEEVVSVLRVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASRQQPVQYSNPHIVFAFYNSVSSPMADKLKDMGISVRGDIVAVNSLLNHPEEFQLSESESDDEGQELLQVTRVDRDNVLARVAFPTEIKVDVCKKVNLDITTLITYVSAMSYGGCHFVFKEKVLTEQAEQERKERVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERADVLIKRISVVPDQPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEAFAVPLPKDLTDDSAH", "length": 421 }, "evidence": [ { "id": "F1SSE3", "url": "https://omabrowser.org/oma/group/F1SSE3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BPX7-1", "protein_name": "UPF0415 protein C7orf25", "gene_name": "C7orf25", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSAHSMLCERIAIAKELIKRAESLSRSRKGGIEGGAKLCSKLKAELKFLQKVEAGKVAIKESHLQSTNLTHLRAIVESAENLEEVVSVLHVFGYTDTLGEKQTLVVDVVANGGHTWVKAIGRKAEALHNIWLGRGQYGDKSIIEQAEDFLQASHQQPVQYSNPHIIFAFYNSVSSPMAEKLKEMGISVRGDIVAVNALLDHPEELQPSESESDDEGPELLQVTRVDRENILASVAFPTEIKVDVCKRVNLDITTLITYVSALSYGGCHFIFKEKVLTEQAEQERKEQVLPQLEAFMKDKELFACESAVKDFQSILDTLGGPGERERATVLIKRINVVPDQPSERALRLVASSKINSRSLTIFGTGDTLKAITMTANSGFVRAANNQGVKFSVFIHQPRALTESKEALATPLPKDYTTDSEH", "length": 421 }, "evidence": [ { "id": "F1SSE3", "url": "https://omabrowser.org/oma/group/F1SSE3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W0M6-1", "protein_name": "DUF1308 domain-containing protein", "gene_name": "CG13886", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEEQEDREKLYEEAHKKVKLGEELKKALKDFEDLPGVSKVQRKIQQELKFLNKVITTRSVKEHHITSSNFVYYDFLIKTLRLQQGVVDINAVFRLESRDSPLRVDIVANNGLKWVKVIARNSKSVEDAARGCVSIGARSVIDQAEDYLEASELSFCMFQRPKIVFYFSNKIEDSLHEELMEMGVQTASLDSPDTDLDMYATTSNELNLDVTTLLAYVSALTNGSANWVYKEPLLTEQAERERASPLKPLLEKILEGKTLVCCQLAYDAFQSILDIVGGEGERKRAEELMKRVTVYPDVETIPEEFSHIRFTANVNERSLKIFSFGMARQIFTVTSNKAFVRSAKMQGINVPVFVHASVALTEGKQATGRPL", "length": 371 }, "evidence": [ { "id": "F1SSE3", "url": "https://omabrowser.org/oma/group/F1SSE3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SSE3", "url": "https://www.uniprot.org/uniprotkb/F1SSE3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 68, "end_pos": 70, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SSE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSE3" }, { "id": "PF07000", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07000" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF1308", "eco_id": "ECO_0000259", "start_pos": 248, "end_pos": 409, "start_aa": "Val", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SSE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSE3" }, { "id": "PF18474", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18474" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF5614", "eco_id": "ECO_0000259", "start_pos": 1, "end_pos": 216, "start_aa": "Met", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 68, "end_pos": 70 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 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"categories": [ "Gene Expression" ] }, { "id": "IPR007735", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007735", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039797", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039797", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR12372", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12372", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12372:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12372:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05041", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05041", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A314", "url": "https://www.uniprot.org/uniprotkb/A0A287A314", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A314-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A314-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSI4", "url": "https://www.uniprot.org/uniprotkb/F1SSI4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSI4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSI4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MRRMSPDVPLLNDYKQDFFLKRFPQTVLGGPRLKLGYCAPPYIYVNQIILFLMPWVLGGIGTLLYQFGILEDYYTAALSGGLMLFTAFVIQFTSRYARNKSVTVERMLTTNILAEEDEHEFTSCVGAETIKFLIPGKKHIVNTVFHSVLAGLVCGLGTWYLLPNRVTQLYGSAGGTVLLFVFGWMTLCIGEYSLIVNTATETATFQTQDTYEITPLMRPLYIFVFVSVDLAHRFMVNIPVLEQMNQILHILFVFLPFLWALGTLPPPDALFLWAMEQVLEFGLGGSSMSTHLRLLIMFIISSGTVITSYFIPSTVGVVLFMTGLGFLLSLNLSGMSFLFRHSVTKHRVETKSKTLPSGLEKQFTWKEFLFYIIVLVLALLETGLLHHFAGFSHISKSSPQAIVGYILMILFIILWILKEIQSVYIFGIFRNPFYPKDVQTVTLFLEKQTKLVKIGVVRRILINIVSPFAMIAFLSMDSALQRLHSVSVSIGFTRAFRMVWQNTENALLEIVIVSAVHLLISSTDTWWNRSLDTGIRLLLVGIMRDRLIQFISKLQFAVTVLLASWTEKKRRKSTTTLCILNIVFSPFMLLLIVFSTLLSSPLLPLFTLPLFLVGFPRPVQSWPGVVGTTACVCADTVYYYQMVPSLTTALQSAMAAGSLGLILPGSHYLGRFQDRLIWIMILECGYTYCCLNIKGLELQETSCHTAEARRVDEVFQGAFEQEEYARVCSINEHFGNVLTPCTVLPVKLYSDARSVLSGIIDSHDNLKEFKGDLVKVLVWILVQFCSRRSSMQENVQKTENKGKASLIILPALNSSPQPESLEDTDSLNSENLDDWSDDIFGEEPTIKKGKEEKDQVKVLPVINLPIPGSVESQRVGNHSTSTVTECSLYQAVVLGYPAVDKGEQEDRTYIPLMEFSCSHSHLLSLPEEWMSNCLPNSKVKEMRSLFPEDWYQFVLKHLECFHSKENASSIVEEIAKDRVLKEFYVHAVVTCYFSLFGVDNMTPSPGHILRVYSGVLPWSVALDWLTEKPELFQLVLKAFRYTLKLMIDKASLGPIEDFKELTDCLEEYESDWYIGLVSDEKWKEAVLQEKPYLFSLGYDPNMGVYTGRVLTLQELLIQVGKLNAEAVRGQWANLSWELLYATNDDEERYSIQAHPLLLRNLTVQAADPPLGYPIYSSKPLHIHLF", "length": 1185, "header": "tr|F1SSI4-1|F1SSI4_PIG Isoform 1 of Pecanex-like protein OS=Sus scrofa OX=9823 GN=PCNX4 PE=3 SV=2 CANONICAL=F1SSI4-1" }, "isoforms": [ { "isoform_ac": "A0A287A314-1", "url": "https://www.uniprot.org/uniprotkb/F1SSI4/entry#A0A287A314-1", "sequence": { "sequence": "MRRMSPDVPLLNDYKQDFFLKRFPQTVLGGPRLKLGYCAPPYIYVNQIILFLMPWVLGGIGTLLYQFGILEDYYTAALSGGLMLFTAFVIQFTSRYARNKSVTVERMLTTNILAEEDEHEFTSCVGAETIKFLIPGKKHIVNTVFHSVLAGLVCGLGTWYLLPNRVTQLYGSAGGTVLLFVFGWMTLCIGEYSLIVNTATETATFQTQDTYEITPLMRPLYIFVFVSVDLAHRFMVNIPVLEQMNQILHILFVFLPFLWALGTLPPPDALFLWAMEQVLEFGLGGSSMSTHLRLLIMFIISSGTVITSYFIPSTVGVVLFMTGLGFLLSLNLSGMSFLFRHSVTKHRVETKSKTLPSGLEKQFTWKEFLFYIIVLVLALLETGLLHHFAGFSHISKSSPQAIVGYILMILFIILWILKEIQSVYIFGIFRNPFYPKDVQTVTLFLEKQTKLVKIGVVRRILINIVSPFAMIAFLSMDSALQRLHSVSVSIGFTRAFRMVWQNTENALLEIVIVSAVHLLISSTDTWWNRSLDTGIRLLLVGIMRDRLIQFISKLQFAVTVLLASWTEKKRRKSTTTLCILNIVFSPFMLLLIVFSTLLSSPLLPLFTLPLFLVGFPRPVQSWPGVVGTTACVCADTVYYYQMVPSLTTALQSAMAAGSLGLILPGSHYLGRFQDRLIWIMILECGYTYCCLNIKGLELQETSCHTAEARRVDEVFQGAFEQEEYARVCSINEHFGNVLTPCTVLPVKLYSDARSVLSGIIDSHDNLKEFKGDLVKVLVWILVQFCSRRSSMQENVQKTENKGKASLIILPALNSSPQPESLEDTDSLNSENLDDWSDDIFGEEPTIKKGKEEKDQVKVLPVINLPIPGSVESQRVGNHSTSTVTECSLYQAVVLGYPAVDKGEQEDRTYIPLMEFSCSHSHLLSLPEEWMSNCLPNSKVKEMRSLFPEDWYQFVLKHLECFHSKENASSIVEEIAKDRVLKEFYVHAVVTCYFSLFGVDNMTPSPGHILRVYSGVLPWSVALDWLTEKPELFQLVLKAFRYTLKLMIDKASLGPIEDFKELTDCLEEYESDWYIGLVSDEKWKEAVLQEKPYLFSLGYDPNMLSKTETPLRLVLPRTQGSLSPQLPVERLFSYKKNFSISLLTLGMYSQKGVYTGRVLTLQELLIQVGKLNAEAVRGQWANLSWELLYATNDDEERYSIQAHPLLLRNLTVQAADPPLGYPIYSSKPLHIHLF", "length": 1233, "header": "tr|A0A287A314-1|A0A287A314_PIG Computationally mapped isoform of Pecanex-like protein OS=Sus scrofa OX=9823 GN=PCNX4 PE=3 SV=2 CANONICAL=F1SSI4-1" }, "locus": { "chromosome": "1", "start_pos": 189150083, "end_pos": 189121027, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042041.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042041.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038316.2", "url": "https://www.ensembl.org/id/ENSSSCP00000038316.2" } ] } }, { "isoform_ac": "F1SSI4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSI4/entry#F1SSI4-1", "sequence": { "sequence": "MRRMSPDVPLLNDYKQDFFLKRFPQTVLGGPRLKLGYCAPPYIYVNQIILFLMPWVLGGIGTLLYQFGILEDYYTAALSGGLMLFTAFVIQFTSRYARNKSVTVERMLTTNILAEEDEHEFTSCVGAETIKFLIPGKKHIVNTVFHSVLAGLVCGLGTWYLLPNRVTQLYGSAGGTVLLFVFGWMTLCIGEYSLIVNTATETATFQTQDTYEITPLMRPLYIFVFVSVDLAHRFMVNIPVLEQMNQILHILFVFLPFLWALGTLPPPDALFLWAMEQVLEFGLGGSSMSTHLRLLIMFIISSGTVITSYFIPSTVGVVLFMTGLGFLLSLNLSGMSFLFRHSVTKHRVETKSKTLPSGLEKQFTWKEFLFYIIVLVLALLETGLLHHFAGFSHISKSSPQAIVGYILMILFIILWILKEIQSVYIFGIFRNPFYPKDVQTVTLFLEKQTKLVKIGVVRRILINIVSPFAMIAFLSMDSALQRLHSVSVSIGFTRAFRMVWQNTENALLEIVIVSAVHLLISSTDTWWNRSLDTGIRLLLVGIMRDRLIQFISKLQFAVTVLLASWTEKKRRKSTTTLCILNIVFSPFMLLLIVFSTLLSSPLLPLFTLPLFLVGFPRPVQSWPGVVGTTACVCADTVYYYQMVPSLTTALQSAMAAGSLGLILPGSHYLGRFQDRLIWIMILECGYTYCCLNIKGLELQETSCHTAEARRVDEVFQGAFEQEEYARVCSINEHFGNVLTPCTVLPVKLYSDARSVLSGIIDSHDNLKEFKGDLVKVLVWILVQFCSRRSSMQENVQKTENKGKASLIILPALNSSPQPESLEDTDSLNSENLDDWSDDIFGEEPTIKKGKEEKDQVKVLPVINLPIPGSVESQRVGNHSTSTVTECSLYQAVVLGYPAVDKGEQEDRTYIPLMEFSCSHSHLLSLPEEWMSNCLPNSKVKEMRSLFPEDWYQFVLKHLECFHSKENASSIVEEIAKDRVLKEFYVHAVVTCYFSLFGVDNMTPSPGHILRVYSGVLPWSVALDWLTEKPELFQLVLKAFRYTLKLMIDKASLGPIEDFKELTDCLEEYESDWYIGLVSDEKWKEAVLQEKPYLFSLGYDPNMGVYTGRVLTLQELLIQVGKLNAEAVRGQWANLSWELLYATNDDEERYSIQAHPLLLRNLTVQAADPPLGYPIYSSKPLHIHLF", "length": 1185, "header": "tr|F1SSI4-1|F1SSI4_PIG Isoform 1 of Pecanex-like protein OS=Sus scrofa OX=9823 GN=PCNX4 PE=3 SV=2 CANONICAL=F1SSI4-1" }, "locus": { "chromosome": "1", "start_pos": 189150083, "end_pos": 189121027, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005601.4", "url": "https://www.ensembl.org/id/ENSSSCT00000005601.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005461.3", "url": "https://www.ensembl.org/id/ENSSSCP00000005461.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSI4", "url": "https://www.uniprot.org/uniprotkb/F1SSI4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SSI4", "url": "https://www.uniprot.org/uniprotkb/F1SSI4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1000, "end_pos": 1002, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1133, "end_pos": 1135, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1160, "end_pos": 1162, "annotation": "n_glycosylation_sequon" }, { "start_pos": 331, "end_pos": 333, "annotation": "n_glycosylation_sequon" }, { "start_pos": 528, "end_pos": 530, "annotation": "n_glycosylation_sequon" }, { "start_pos": 813, "end_pos": 815, "annotation": "n_glycosylation_sequon" }, { "start_pos": 877, "end_pos": 879, "annotation": "n_glycosylation_sequon" }, { "start_pos": 966, "end_pos": 968, "annotation": "n_glycosylation_sequon" }, { "start_pos": 99, "end_pos": 101, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SSI4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1185, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SSI4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SSI4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SSI4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSI4" }, { "id": "PF05041", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05041" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Pecanex C-terminal", "eco_id": "ECO_0000259", "start_pos": 1023, "end_pos": 1177, "start_aa": "Asp", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1000, "end_pos": 1002 }, { "start_pos": 1133, "end_pos": 1135 }, { "start_pos": 1160, "end_pos": 1162 }, { "start_pos": 331, "end_pos": 333 }, { "start_pos": 528, "end_pos": 530 }, { "start_pos": 813, "end_pos": 815 }, { "start_pos": 877, "end_pos": 879 }, { "start_pos": 966, "end_pos": 968 }, { "start_pos": 99, "end_pos": 101 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SSI5-1", "uniprot_ac": "F1SSI5", "uniprot_id": "F1SSI5_PIG", "mass": { "chemical_mass": 165159.0, "monoisotopic_mass": 165159.0 }, "refseq": {}, "gene_names": [ { "name": "LRRC9", "type": "recommended", "evidence": [ { "id": "F1SSI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSI5" } ] } ], "protein_names": [ { "name": "Leucine rich repeat containing 9", "type": "synonym", "evidence": [ { "id": "F1SSI5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSI5/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SSI5", "url": "https://www.uniprot.org/uniprotkb/F1SSI5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LRRC9", "url": "https://www.uniprot.org/uniprotkb/F1SSI5", "locus": { "chromosome": "1", "start_pos": 189081731, "end_pos": 188966688, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005081", "url": "https://www.ensembl.org/id/ENSSSCG00000005081" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005081", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005081", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003603", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003603", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025875", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025875", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050836", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050836", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46652", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46652", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46652:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46652:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12799", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12799", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14580", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14580", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SSI5", "url": "https://www.uniprot.org/uniprotkb/F1SSI5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSI5-1", "url": "https://www.uniprot.org/uniprotkb/F1SSI5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"id": "A0A287BSP3", "url": "https://www.orthodb.org/?gene=A0A287BSP3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SSM4", "url": "https://www.orthodb.org/?gene=F1SSM4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16214", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16214", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16214:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16214:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11028", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11028", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF28495", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28495", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003121871", "url": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSM4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSM4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLHGDGGGLAEGPAARVGPRRSRGLRGGVAVFAAVAAVFTLTLPPSVPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAIILFPFGSVAYRVNLLCGLFGAVAAALLFFTVFRLSGSYAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVHFEEAATSQERSKIAKIGAFCCGLSLCNQHTIVLYVLCIIPWILFRLLKEKELSLGSLLNLSLFFSAGLLPYIYLPISSYLHQARWTWGDQTTLLGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQLTNMRTQLSFNIQALAVWANICLARKDRQNPPLAWLFTGMFCIYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAALVSESNRVLNTNGLQFLEWLSATLFVTYQIYSNYSICDQRTNYVIDKFAKNLLASMPQDAIILLRGDLPGNSLRYLHYCEGLRPDISLVDQEMMTYEWYLPKMAKHLPGVKFPGNRWNPVEGILPSGMVTFNLYHFLKINKQKETFVCIGIHEGDPTWKKNYSLWPWGSCDKLVSSEIAFNPEEWIKLTRNIYNWTEEYGRFDPSSWESVANEEMWQARMKTPFFIFNLAETTSLPSDVKAQLYTHAYNLYKEIVYLRKEHPVNWHKNYAIACERMLRLQESGADPEVLLSETIRHFRLYTQKARNDPQLADISAALKHLRKELQSLRNRKNV", "length": 707, "header": "tr|F1SSM4-1|F1SSM4_PIG Isoform 1 of Transmembrane protein 260 OS=Sus scrofa OX=9823 GN=TMEM260 PE=4 SV=1 CANONICAL=F1SSM4-1" }, "isoforms": [ { "isoform_ac": "A0A287AVI4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSM4/entry#A0A287AVI4-1", "sequence": { "sequence": "MGLHGDGGGLAEGPAARVGPRRSRGLRGGVAVFAAVAAVFTLTLPPSVPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAIILFPFGSVAYRVNLLCGLFGAVAAALLFFTVFRLSGSYAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVHFEEAATSQERSKIAKIGAFCCGLSLCNQHTIVLYVLCIIPWILFRLLKEKELSLGSLLNLSLFFSAGLLPYIYLPISSYLHQARWTWGDQTTLLGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQLTNMRTQLSFNIQALAVWANICLARKDRQNPPLAWLFTGMFCIYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAALVSESNRVLNTNGLQFLEWLSATLFVTYQIYSNYR", "length": 409, "header": "tr|A0A287AVI4-1|A0A287AVI4_PIG Computationally mapped isoform of Transmembrane protein 260 OS=Sus scrofa OX=9823 GN=TMEM260 PE=4 SV=2 CANONICAL=F1SSM4-1" }, "locus": { "chromosome": "1", "start_pos": 185868010, "end_pos": 185821638, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055762.2", "url": "https://www.ensembl.org/id/ENSSSCT00000055762.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048143.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048143.2" } ] } }, { "isoform_ac": "A0A287AWD7-1", "url": "https://www.uniprot.org/uniprotkb/F1SSM4/entry#A0A287AWD7-1", "sequence": { "sequence": "MGLHGDGGGLAEGPAARVGPRRSRGLRGGVAVFAAVAAVFTLTLPPSVPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAIILFPFGSVAYRVNLLCGLFGAVAAALLFFTVFRLSGSYAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVHFEEAATSQERSKIAKIGAFCCGLSLCNQHTIVLYVLCIIPWILFRLLKEKELSLGSLLNLSLFFSAGLLPYIYLPISSYLHQARWTWGDQTTLLGFLTHFLREEYGTFSLAKSEIGSSMSEILLDRQNPPLAWLFTGMFCIYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAALVSESNRVLNTNGLQFLEWLSATLFVTYQIYSNYSICDQRTNYVIDKFAKNLLASMPQDAIILLRGDLPGNSLRYLHYCEGLRPDISLVDQEMMTYEWYLPKMAKHLPGVKFPGNRWNPVEGILPSGMVTFNLYHFLKINKQKETFVCIGIHEGDPTWKKNYSLWPWGSCDKLVSSEIAFNPEEWIKLTRNIYNWTEEYGRFDPSSWESVANEEMWQARMKTPFFIFNLAETTSLPSDVKAQLYTHAYNLYKEIVYLRKEHPVNWHKNYAIACERMLRLQESGADPEVLLSETIRHFRLYTQKARNDPQLADISAALKHLRKELQSLRNRKNV", "length": 679, "header": "tr|A0A287AWD7-1|A0A287AWD7_PIG Computationally mapped isoform of Transmembrane protein 260 OS=Sus scrofa OX=9823 GN=TMEM260 PE=4 SV=1 CANONICAL=F1SSM4-1" }, "locus": { "chromosome": "1", "start_pos": 185882902, "end_pos": 185821638, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043116.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043116.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048447.1", "url": "https://www.ensembl.org/id/ENSSSCP00000048447.1" } ] } }, { "isoform_ac": "A0A287BSP3-1", "url": "https://www.uniprot.org/uniprotkb/F1SSM4/entry#A0A287BSP3-1", "sequence": { "sequence": "MGLHGDGGGLAEGPAARVGPRRSRGLRGGVAVFAAVAAVFTLTLPPSVPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAIILFPFGSVAYRVNLLCGLFGAVAAALLFFTVFRLSGSYAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVHFEEAATSQERSKIAKIGAFCCGLSLCNQHTIVLYVLCIIPWILFRLLKEKAKSEIGSSMSEILLSQLTNMRTQLSFNIQALAVWANICLARKDRQNPPLAWLFTGMFCIYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAALVSESNRVLNTNGLQFLEWLSATLFVTYQIYSNYSICDQRTNYVIDKFAKNLLASMPQDAIILLRGDLPGNSLRYLHYCEGLRPDISLVDQEMMTYEWYLPKMAKHLPGVKFPGNRWNPVEGILPSGMVTFNLYHFLKINKQKETFVCIGIHEGDPTWKKNYSLWPWGSCDKLVSSEIAFNPEEWIKLTRNIYNWTEEYGRFDPSSWESVANEEMWQARMKTPFFIFNLAETTSLPSDVKAQLYTHAYNLYKEIVYLRKEHPVNWHKNYAIACERMLRLQESGADPEVLLSETIRHFRLYTQKARNDPQLADISAALKHLRKELQSLRNRKNV", "length": 647, "header": "tr|A0A287BSP3-1|A0A287BSP3_PIG Computationally mapped isoform of Transmembrane protein 260 OS=Sus scrofa OX=9823 GN=TMEM260 PE=4 SV=1 CANONICAL=F1SSM4-1" }, "locus": { "chromosome": "1", "start_pos": 185882902, "end_pos": 185821638, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064039.2", "url": "https://www.ensembl.org/id/ENSSSCT00000064039.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059544.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059544.1" } ] } }, { "isoform_ac": "F1SSM4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSM4/entry#F1SSM4-1", "sequence": { "sequence": "MGLHGDGGGLAEGPAARVGPRRSRGLRGGVAVFAAVAAVFTLTLPPSVPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAIILFPFGSVAYRVNLLCGLFGAVAAALLFFTVFRLSGSYAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVHFEEAATSQERSKIAKIGAFCCGLSLCNQHTIVLYVLCIIPWILFRLLKEKELSLGSLLNLSLFFSAGLLPYIYLPISSYLHQARWTWGDQTTLLGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQLTNMRTQLSFNIQALAVWANICLARKDRQNPPLAWLFTGMFCIYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAALVSESNRVLNTNGLQFLEWLSATLFVTYQIYSNYSICDQRTNYVIDKFAKNLLASMPQDAIILLRGDLPGNSLRYLHYCEGLRPDISLVDQEMMTYEWYLPKMAKHLPGVKFPGNRWNPVEGILPSGMVTFNLYHFLKINKQKETFVCIGIHEGDPTWKKNYSLWPWGSCDKLVSSEIAFNPEEWIKLTRNIYNWTEEYGRFDPSSWESVANEEMWQARMKTPFFIFNLAETTSLPSDVKAQLYTHAYNLYKEIVYLRKEHPVNWHKNYAIACERMLRLQESGADPEVLLSETIRHFRLYTQKARNDPQLADISAALKHLRKELQSLRNRKNV", "length": 707, "header": "tr|F1SSM4-1|F1SSM4_PIG Isoform 1 of Transmembrane protein 260 OS=Sus scrofa OX=9823 GN=TMEM260 PE=4 SV=1 CANONICAL=F1SSM4-1" }, "locus": { "chromosome": "1", "start_pos": 185882902, "end_pos": 185821638, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005579.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005579.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005441.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005441.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSM4", "url": "https://www.uniprot.org/uniprotkb/F1SSM4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512450", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512450", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YZN2-1", "protein_name": "Transmembrane protein 260", "gene_name": "TMEM260", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGAGSGSGAAAVAAAGAVGAAVVAVYAGTLPPGLPGGDAGELITAAYELGVAHPPGYPLFTLLAGLAMRLLPGGAAAGRVNLLCAVLGAAAAALLFYTVLRLSGSYAGGILAAGVFSFSRLTWQWSITAEVFSLNNLFVGLLMALTVHFEEASTAKERSKIARLGAFCCGLSLCNQHTIVLYIACIVPWVLFLLFRKMELSLGHLLKLGLCFLAGLLPYLYLPASSYLDRARWTWGDQTTFQGFLTHFLREEYGTFNLAKSESGSSMREMLVFQLEQMRSDLSLPVLALALIACFSTALPIKQQKSPVICLFAGMLCVYSLFFAWRANLDVTKPLFLGVVERFWMQSNVAVAVLAGLGLAALMSLGGAVLQGSRVLPWLEWLSAGALVAAQVWANYRDCDQSNNYIVDKFARNLLSSMPMGAVILLRGDLPGNALRYLHYVEGVRPDITLVDQEMMTYEWYLPKLAKHLPGVHFPGNRWNPVEGILPDGTLVFNLHHFLKANKHKEVFVCIGLHEGDSTWRRSYSLWPWGTCEKLVPTDAVFDPGEWIRLTRNLYNWTEEYGSFKPSSWEAVANEEMWQARMKTAFFIFGLAETASVPAEMKSQLYTLAYTLYKEIVSSHPHHPVNWHKNYAIACERMLRLHRVGEDPEVLLSETVKHFLLYTQKAEDDPQRQDILQAVNHLQKELQGLRGMKAELKRQAG", "length": 701 }, "evidence": [ { "id": "F1SSM4", "url": "https://omabrowser.org/oma/group/F1SSM4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7F5M2-1", "protein_name": "Protein O-mannosyl-transferase TMEM260 isoform X1", "gene_name": "tmem260", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSSDRWTWSLTGATVAGVSALYVGCAPRAVPGGDSGELITAACELGVAHPPGYPLFTMMSSLMLSLLPLSSPAHSINVLCAVFGAGASGALCFTVCRVAEPGPGAVLAGGVFAVSRLVWQWSVVAEVFSLNNLFVGVLFSLSACFHCADTVQQKKKFALWGALFCGLSLCNQHTLVLYVVVIIPWALLHLYTHNGLSFFDLVSLGTCFLAGFVPYMYLPVSSYLNRARWSWGDQTSVHGLLTHLLRAEYGTFSLAKTNESLNLLEMLRAQWNHCVNDLTVPVLALALLGMLLSLRSRLRCIFVCLIVTMVSIYSVFFAWRANLNIEKPLLLGVVERFWLQADAGVCVLAGLGLSWLVCCLTGHLGKGTVWNTGAWILTAGLISHMISLNHRDCDQSSNDVVDRFSREVVLSLPQGSLVLTRGDLPGNTLRYQHYCQSLRPDLSLVDQEMMTYNWYVAKLQRHLPGVTFPGHRWDPVNAVEKKTFSIEQFLKRNLHRPVFVCIGLTEGDPSWEGSFSRWPWGVCEQLLPVKTPFDPKKWAQKTHNLYNWSEPHDSFHPGSWERVANEEMWQARMKTAFFLFDLAENAEKEQQGRLYEISYKLYCQIVDSQVDYPANWDKNLALAAERLLQSGGRGYGLDSLMSRSIRHFSRYLKREPSDPQSKAIRSIITHLRKEREKFRDRQKA", "length": 684 }, "evidence": [ { "id": "F1SSM4", "url": "https://omabrowser.org/oma/group/F1SSM4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1M7C0-1", "protein_name": "Transmembrane protein 260", "gene_name": "Tmem260", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLHGDGGGPAAGAGPWRSGGLCGSVAVFAAVAAVFTLTLPRSLPGGDSGELITAAHELGVAHPPGYPLFTLVANLAITLFPFGSVAYRVNLLCGLFGAVAASLLFFTVFRLSGSRAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVRFEEATAAKERSKIAAIGAFSCGLSLCNQHTIVLYVLCIIPWILFRLLKEKELTLSLLLKLALAFSAGLLPYVYLPVSSYLSHARWTWGDQTTLRGFLTHFLREEYGTFSLAKSEVGSSASTVLLSQIINMKTELSFNIQALAVWANVCLPRKDRRKSSVVWLFTGMLCVYSLFFTWRANLDISKPLFMGVVERFWMQSNAVVAVLAGLGLATLVSETSRVLSWNGVRNLEWLSAALFIAYQVYSNYSICDQRTNNVIDQFARNLLNSMPPDAIILLRGDLPGNALRYLHYCEGLRPDVSLVDQEMMTYEWYLPKVARHLPGVHFPGDRWNPVEGVLPSGMVTFNLYHFLEMNKQKETFVCIGIHEGDPTWKKDYSLWPWGSCDKLVPSKIVFNPEEWIEHTRTIYNWTEEYGRFDPSSWESVANEEMWQARMKTPFFIFSLAESAAVPADVKAQLYTHAYKLYKEIVYLQEEHPVNWHKNYAIACERMLRLPGTGEDPEVLLSETIRHFHLYTQKAQNDPQRASIMAALKHLRRELRSLRNTKEV", "length": 703 }, "evidence": [ { "id": "F1SSM4", "url": "https://omabrowser.org/oma/group/F1SSM4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N5A9-1", "protein_name": "Transmembrane protein 260", "gene_name": "TMEM260", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MATAGARLGGQAARVGARGAGGLCGGVAVFAAVAAVFTLTLPPSLPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAILLFPFGSVAYRVNLLCGLFGAAAAALLFFTVFRLSGSYAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVHFEEAATAQERSKIAKIGALCCGLSLCNQHTIVLYVLCIIPWILFRLLKEKELSPGSLLKLSLCFSAGLLPYIYLPVSSYLNQARWTWGDQTTLLGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQVTNMRTQLSFNIQALAVWANICLTRKDRQSPSLVWLFTGMFCIYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAALVSESNRVLNTNGLQYLEWLSAILFVTCQIYSNYSICDQRTNYVIDKFAKNLLSSMPRDAIILLRGDLPGNSLRYMHYCEGLRPDISLVDQEMMTYEWYLPKMAKHLPGVKFPGNRWNPVEGILSSGMVTFNLYHFLEVNKQKETFVCIGIHEGDPTWKKNYSLWPWGSCDKLVSSEIVFNPEEWIKLTRNIYNWTESYGRFDPSSWESVANEEMWQARMKTPFFIFNLAESASLPSNVKAQLYTHAYNLYKEIVYLRKEHPVNWHKNYAISCERMLRLQERSADPEVLLSETIRHFRLYTRKAQNDPQLADISVALKHLRKELRSLRNMKNG", "length": 704 }, "evidence": [ { "id": "F1SSM4", "url": "https://omabrowser.org/oma/group/F1SSM4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8BMD6-1", "protein_name": "Protein O-mannosyl-transferase TMEM260", "gene_name": "Tmem260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLHGDGGSPAAGAGPWRSGALRGSVAVFASVAAVFTLTLPRSLPGGDSGELITAAHELGVAHPPGYPLFTLLASLTITLFPFGSVAYRVNLLCGLFGAVAASLLFYTVFRLSGSHAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVRFEEATAAKERSKIAAIGAFSCGLSLCNQHTIVLYILCIIPWILFRLLKEKELTLSLLLRLTLAFSAGLLPYVYLPVSSYLSRARWTWGDQTTLRGFLTHFFREEYGTFSLAKSEVGSSVSTVLLSQVINMKTELSFNIQALAVWANICLARKDRRKSSVVWLFTGMLCLYSLFFAWRANLDISKPLFMGVVERFWLQSNAVVAVLAGLGLATLVSETNRVLHCTGIRNLEWLSAALFVAYQVYSNYSICDQRTNNVIDQFARNLLDSMPQDAIILLRGDLPGNALRYLHYCEGLRPDVSLVDQEMMTYEWYLPKMARHLPGVHFPGDRWNPVEGVLPSGMVTFNLYHFLEMNKQKETFVCIGIHEGDPTWKKDYSLWPWGSCDKLVPSKIVFNPEEWIERTRAIYNWTEAYERFGPSSWESVANEEMWQARMKTPFFIFSLAESAAVPADVKAQLYTHAYKLYKEIVYLQEEHPVNWHKNYAIACERMLRLPGTGIDPEVLLSEAIRHFHLYTQKAQNDPQRADIIAALKHLRRELQSLRNIKKV", "length": 703 }, "evidence": [ { "id": "F1SSM4", "url": "https://omabrowser.org/oma/group/F1SSM4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MXQ3-1", "protein_name": "Protein O-mannosyl-transferase tmem260", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNSPTLSNTRNRKNNNNNSNSNSNSNNNNNNNNNNNNNSNNNNNNNNNVNRNVNNRNNNNNNIINVNNNVSSTTMNMAKDFMNWNDGIIEREDTQLQQQKDRCFKILKKSTIACIVLLFISCTIIYSMTQYPSVSGGDAGELIVVAHQFGVAHPPGYPLFTFLGYIFSHIIPSNTLSVAWKISFMSSMIGSIASIFIYLTVYLWVNNHWCGLLSAYMFTFSPLIWMYQIQGEVFSMNNMFVAMLMFLGVWYTRVRIFENERYNTAFWTSERIAYLSAFSCAIGLTNQHTLVLIVIPFAFWLMFISGRDQLWNIKILSNLVFYTLIGLSPYLLLFITPKLNRVKYSWGNTSTLRGFIKHFLREEYGTLQLYGGDGGVISLFTKISIYIENLIIQFGYIGLALSLIGLLNLLLGYNIRTFKWKSFGTMIIFSFLFYITFFFNLCNLPIDKPLYRGVFLRFFMQPNVIISITMGLGIKSIFGFLNRIQRDGGTAATTTTTISKIQKYLLPIIIILLVGNQIGFNYNLQDQSDNYSFYDYGHSVLDGLPRNTLLLVGGDLVTNVPMYLHLCEKVRPDIDILSMEIMSWEWFKITQSPLFQRVKFPGNVYHPYIPDGYSLKDFLDANINDRPIYIGGDFKSGDSSFQNDYYTISKGLTSQIIPKKDSHKFNTFKIIKTTFSTFPSFHIPNNTEKYPNDSWEHFMMEEMAVSLERAAETLLKEYLSQQNTESFKALELSVEILEKALTYVNDKCWSLKHLGICFDHLRYRVVQNVNNNNQQAQNKASNYSKQLLYFWKKYINQCTHEENTDQDWETIKKVIQLI", "length": 819 }, "evidence": [ { "id": "F1SSM4", "url": "https://omabrowser.org/oma/group/F1SSM4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9NX78-1", "protein_name": "Protein O-mannosyl-transferase TMEM260", "gene_name": "TMEM260", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSPHGDGRGQAQGRAVRVGLRRSGGIRGGVAVFAAVAAVFTFTLPPSVPGGDSGELITAAHELGVAHPPGYPLFTLVAKLAITLFPFGSIAYRVNLLCGLFGAVAASLLFFTVFRLSGSSAGGILAAGVFSFSRLTWQWSIAAEVFSLNNLFVGLLMALTVHFEEAATAKERSKVAKIGAFCCGLSLCNQHTIILYVLCIIPWILFQLLKKKELSLGSLLKLSLYFSAGLLPYVHLPISSYLNHARWTWGDQTTLQGFLTHFLREEYGTFSLAKSEIGSSMSEILLSQVTNMRTELSFNIQALAVCANICLATKDRQNPSLVWLFTGMFCIYSLFFAWRANLDISKPLFMGVVERFWMQSNAVVAVLAGIGLAAVVSETNRVLNSNGLQCLEWLSATLFVVYQIYSNYSVCDQRTNYVIDKFAKNLLTSMPHDAIILLRGDLPGNSLRYMHYCEGLRPDISLVDQEMMTYEWYLPKMAKHLPGVNFPGNRWNPVEGILPSGMVTFNLYHFLEVNKQKETFVCIGIHEGDPTWKKNYSLWPWGSCDKLVPLEIVFNPEEWIKLTKSIYNWTEEYGRFDPSSWESVANEEMWQARMKTPFFIFNLAETAHMPSKVKAQLYAQAYDLYKEIVYLQKEHPVNWHKNYAIACERMLRLQARDADPEVLLSETIRHFRLYSQKAPNDPQQADILGALKHLRKELQSLRNRKNV", "length": 707 }, "evidence": [ { "id": "F1SSM4", "url": "https://omabrowser.org/oma/group/F1SSM4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "dolichyl-phosphate-mannose-protein mannosyltransferase activity", "id": "GO:0004169", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004169", "evidence": [ { "database": "UniProtKB", "id": "F1SSM4", "url": "https://www.uniprot.org/uniprotkb/F1SSM4" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "F1SSM4", "url": "https://www.uniprot.org/uniprotkb/F1SSM4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein maturation", "id": "GO:0051604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051604", "evidence": [ { "database": "UniProtKB", "id": "F1SSM4", "url": "https://www.uniprot.org/uniprotkb/F1SSM4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 221, "end_pos": 223, "annotation": "n_glycosylation_sequon" }, { "start_pos": 407, "end_pos": 409, "annotation": "n_glycosylation_sequon" }, { "start_pos": 535, "end_pos": 537, "annotation": "n_glycosylation_sequon" }, { "start_pos": 568, "end_pos": 570, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SSM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSM4" }, { "id": "PF11028", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11028" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein O-mannosyl-transferase TMEM260 N-terminal", "eco_id": "ECO_0000259", "start_pos": 52, "end_pos": 212, "start_aa": "Asp", "end_aa": "Lys", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SSM4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSM4" }, { "id": "PF28495", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28495" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "TMEM260-associated", "eco_id": "ECO_0000259", "start_pos": 421, "end_pos": 479, "start_aa": "Lys", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 221, "end_pos": 223 }, { "start_pos": 407, "end_pos": 409 }, { "start_pos": 535, "end_pos": 537 }, { "start_pos": 568, "end_pos": 570 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SSR2-1", "uniprot_ac": "F1SSR2", "uniprot_id": "F1SSR2_PIG", "mass": { "chemical_mass": 151714.0, "monoisotopic_mass": 151714.0 }, "refseq": { "ac": "XP_005659806", "name": "protein dispatched homolog 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659806" }, "gene_names": [ { "name": "DISP2", "type": "recommended", "evidence": [ { "id": "F1SSR2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSR2" } ] }, { "name": "DISP2", "type": "synonym", "evidence": [ { "id": "XP_005659806", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659806" } ] } ], "protein_names": [ { "name": "Protein dispatched homolog 2", "type": "recommended", "evidence": [ { "id": "F1SSR2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSR2/entry#names_and_taxonomy" } ] }, { "name": "protein dispatched homolog 2", "type": "synonym", "evidence": [ { "id": "XP_005659806", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659806" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SSR2", "url": "https://www.uniprot.org/uniprotkb/F1SSR2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DISP2", "url": "https://www.uniprot.org/uniprotkb/F1SSR2", "locus": { "chromosome": "1", "start_pos": 130937400, "end_pos": 130952046, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004776", "url": "https://www.ensembl.org/id/ENSSSCG00000004776" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004776", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004776", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100156025", "url": "https://www.ncbi.nlm.nih.gov/gene/100156025", "database": "GeneID", 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45951:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12349", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12349", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005659806", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005659806", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SSR2", "url": "https://www.uniprot.org/uniprotkb/F1SSR2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSR2-1", "url": "https://www.uniprot.org/uniprotkb/F1SSR2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"evidence": [ { "id": "F1ST19", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST19/entry#names_and_taxonomy" } ] }, { "name": "acyl-coenzyme A thioesterase THEM5 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_013852587", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013852587" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST19", "url": "https://www.uniprot.org/uniprotkb/F1ST19" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "THEM5", "url": "https://www.uniprot.org/uniprotkb/F1ST19", "locus": { "chromosome": "4", "start_pos": 97359428, "end_pos": 97332432, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006614", "url": "https://www.ensembl.org/id/ENSSSCG00000006614" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006614", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006614", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03443", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03443", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100622268", "url": "https://www.ncbi.nlm.nih.gov/gene/100622268", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006683", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006683", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029069", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029069", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622268", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622268", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QVEGQGY", 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"RefSeq", "categories": [ "Protein" ] }, { "id": "F1ST19", "url": "https://www.uniprot.org/uniprotkb/F1ST19", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST19-1", "url": "https://www.uniprot.org/uniprotkb/F1ST19-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIRKGFQMAARLGHHRAHPGALNSLSRFNSASVFGSSMDSVVSRTCQEKTDLKNYASPNASWCPDMLSLYHDFLEKTKADGWVKLLSFKSNRDHIQGFKMPSGLQVTSDKRDWRLFTRCIETEGQGYEYVIFFHPSQKKSVCLFQPGPYLEGPPGFAHGGSLAAMIDETFSKTAYLAGEGLLTLNLNISFKNLIPVDSLAVLNVDVEKIENQKIYMSCIIQSRDQQTLYAKASGIFLQMSLEKDSSK", "length": 247, "header": "tr|F1ST19-1|F1ST19_PIG Isoform 1 of Thioesterase superfamily member 5 OS=Sus scrofa OX=9823 GN=THEM5 PE=4 SV=1 CANONICAL=F1ST19-1" }, "isoforms": [ { "isoform_ac": "F1ST19-1", "url": "https://www.uniprot.org/uniprotkb/F1ST19/entry#F1ST19-1", "sequence": { "sequence": "MIRKGFQMAARLGHHRAHPGALNSLSRFNSASVFGSSMDSVVSRTCQEKTDLKNYASPNASWCPDMLSLYHDFLEKTKADGWVKLLSFKSNRDHIQGFKMPSGLQVTSDKRDWRLFTRCIETEGQGYEYVIFFHPSQKKSVCLFQPGPYLEGPPGFAHGGSLAAMIDETFSKTAYLAGEGLLTLNLNISFKNLIPVDSLAVLNVDVEKIENQKIYMSCIIQSRDQQTLYAKASGIFLQMSLEKDSSK", "length": 247, "header": "tr|F1ST19-1|F1ST19_PIG Isoform 1 of Thioesterase superfamily member 5 OS=Sus scrofa OX=9823 GN=THEM5 PE=4 SV=1 CANONICAL=F1ST19-1" }, "locus": { "chromosome": "4", "start_pos": 97358424, "end_pos": 97349127, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007248.5", "url": "https://www.ensembl.org/id/ENSSSCT00000007248.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007053.2", "url": "https://www.ensembl.org/id/ENSSSCP00000007053.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST19", "url": "https://www.uniprot.org/uniprotkb/F1ST19" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622268", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622268", "resource": "KEGG Pathway" }, { "id": "R-SSC-77289", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-77289", "resource": "Reactome", "description": "Mitochondrial Fatty Acid Beta-Oxidation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AEW3-1", "protein_name": "Thioesterase superfamily member 5", "gene_name": "Them5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMRTGFQGVARLVHHKALYRSPQTLPRLHLASAFGSSTDSLVARFCGEKTDLKDYALPNASWCPDMLSLYQEFLEKTKSGSWVKLPSFKSNRDHIRGLKLPFGLVAASDKQDWRLFTRSIQLEGQGYEYVIFFHPSEKKSVCLFQPGPYLEGAPGFAHGGSLAALMDETYSKTAYLAGEGLFTLSFNIKFKNLIPVGSLAVLDLQVEKIEDQKLYMSCIAQSRDKQTVYAKSSGKEICSLSLGCLPLPNPQQGGKQRVKDQVLSWSLVLLGVGMLLARDMDEEKEKKTRIFLVRITQPAPLQDSLG", "length": 306 }, "evidence": [ { "id": "F1ST19", "url": "https://omabrowser.org/oma/group/F1ST19/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AAA9SM20-1", "protein_name": "Thioesterase superfamily member 5", "gene_name": "THEM5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005663496" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST20", "url": "https://www.uniprot.org/uniprotkb/F1ST20" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C2CD4D", "url": "https://www.uniprot.org/uniprotkb/F1ST20", "locus": { "chromosome": "4", "start_pos": 97369514, "end_pos": 97368453, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021540", "url": "https://www.ensembl.org/id/ENSSSCG00000021540" } ] } } ], "crossref": [ { "id": "F1ST20", "url": "https://alphafold.ebi.ac.uk/entry/F1ST20", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021540", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021540", "database": "Bgee", 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{ "id": "F1ST20-1", "url": "https://www.uniprot.org/uniprotkb/F1ST20-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWLLEKAGYRVGAAESRARWAPSSLFPKRRTPGQLARACPNVLTPDRIPQFIIPPRLSDPGGAEPPGGRDAGGRGLPTACSLPHLAGREGWAFLPESPHTRRRESLFHSPPPAPAGGLSPAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGPDRPRPPRPCSLSPEEASSADTSPYTPRRAGPPTPPLFHLDFLCCQLRPTKESVLRLEPRGGQLRFSAEYQAAHGRLRLRLVSAEGLPEPRAGPGCGGGGCCVVLRLRPRVRPRGQRSRVVKCSANPIFNEDFFFDGLGPPDLATRSLRAKVLDRGAGFRRDVLLGECETPLIALLPPLGGGLGPGTSLAPAHLSL", "length": 353, "header": "tr|F1ST20-1|F1ST20_PIG Isoform 1 of C2 calcium dependent domain containing 4D OS=Sus scrofa OX=9823 GN=C2CD4D PE=4 SV=1 CANONICAL=F1ST20-1" }, "isoforms": [ { "isoform_ac": "F1ST20-1", "url": "https://www.uniprot.org/uniprotkb/F1ST20/entry#F1ST20-1", "sequence": { "sequence": "MWLLEKAGYRVGAAESRARWAPSSLFPKRRTPGQLARACPNVLTPDRIPQFIIPPRLSDPGGAEPPGGRDAGGRGLPTACSLPHLAGREGWAFLPESPHTRRRESLFHSPPPAPAGGLSPAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGPDRPRPPRPCSLSPEEASSADTSPYTPRRAGPPTPPLFHLDFLCCQLRPTKESVLRLEPRGGQLRFSAEYQAAHGRLRLRLVSAEGLPEPRAGPGCGGGGCCVVLRLRPRVRPRGQRSRVVKCSANPIFNEDFFFDGLGPPDLATRSLRAKVLDRGAGFRRDVLLGECETPLIALLPPLGGGLGPGTSLAPAHLSL", "length": 353, "header": "tr|F1ST20-1|F1ST20_PIG Isoform 1 of C2 calcium dependent domain containing 4D OS=Sus scrofa OX=9823 GN=C2CD4D PE=4 SV=1 CANONICAL=F1ST20-1" }, "locus": { "chromosome": "4", "start_pos": 97369511, "end_pos": 97368453, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023166.2", "url": "https://www.ensembl.org/id/ENSSSCT00000023166.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027771.1", "url": "https://www.ensembl.org/id/ENSSSCP00000027771.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": 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T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST20", "url": "https://www.uniprot.org/uniprotkb/F1ST20" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622378", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622378", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B7Z1M9-1", "protein_name": "C2 calcium-dependent domain-containing protein 4D", "gene_name": "C2CD4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MWLLEKAGYKVGAAEPAARWAPSGLFSKRRAPGPPTSACPNVLTPDRIPQFFIPPRLPDPGGAVPAARRHVAGRGLPATCSLPHLAGREGWAFLPESPHTRRRESLFHGPPPAPAGGLPAAQSRLHVSAPDLRLCRAPDSDTASSPDSSPFGSPRPGLGRRRVSRPHSLSPEKASSADTSPHSPRRAGPPTPPLFHLDFLCCQLRPTRESVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRSRPGSGGGGCCVVLRLRPRVRPREQQSRVVKCSANPIFNEDFFFDGLGPPDLAARSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLGGGLGPGSSLAPTHLSL", "length": 353 }, "evidence": [ { "id": "F1ST20", "url": "https://omabrowser.org/oma/group/F1ST20/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D4A4I1-1", "protein_name": "C2 calcium-dependent domain containing 4D", "gene_name": "C2cd4d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWLLEKAGYRVRTAEARALQAHASLVPKRQAPGSPLRCNPNVLTPDRIPQFFIPPRLQDPSGAEARVDRYPGGRNLPVACSLPHLAGREGWAFLPESPHTRRRESLFHRPRGLAAGLPPAQSRLHVSAPDLRLCRAPDSDTASSPDSSPCGSPRTPRPQSLSPEEASSADTSPYAPRRAPPLFHLDFLCCQLRPTKDSVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRTRPGSGGGGCCVVLRLQPRVRPGAQRSRVVQSSCNPIFNEDFFFEGLRPPDLAARSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLAGGLGPGSSLAPAHLSL", "length": 341 }, "evidence": [ { "id": "F1ST20", "url": "https://omabrowser.org/oma/group/F1ST20/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0CG09-1", "protein_name": "C2 calcium-dependent domain-containing protein 4D", "gene_name": "C2cd4d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWLLEKAGYRVRTAEARALQAHPSLVPKRQARGSPSRCNPNVLTPDRIPQFFIPPRLRDPRGAEGRVDRNPGGRNLPVACSLPHLAGREGWAFLPESPHTRRRESLFHGPRGLAAGLAPAQSRLHVSAPDLRLCRAPDSDTASSPDSSPCGSPHTPRPQSLSPDEASSADTSPYAPRRAPPLFHLDFLCCQLRPTKDSVLRLGPRGGQLRLSTEYQAGPGRLRLRLVSAEGLPRPRTRPGSGGGGCCVILRLQPRVRPGAQRSRVVQSSCNPIFNEDFFFEGLRPPDLAVRSLRAKVLDRGAGLRRDVLLGECETPLIALLPPLAGGLGPGSSLAPTHLSL", "length": 341 }, "evidence": [ { "id": "F1ST20", "url": "https://omabrowser.org/oma/group/F1ST20/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1ST20-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 353, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1ST20-F1.pdb", "url_external": 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"snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1ST31-1", "uniprot_ac": "F1ST31", "uniprot_id": "F1ST31_PIG", "mass": { "chemical_mass": 98189.0, "monoisotopic_mass": 98189.0 }, "refseq": { "ac": "XP_003355237", "name": "trichohyalin-like protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355237" }, "gene_names": [ { "name": "TCHHL1", "type": "recommended", "evidence": [ { "id": "F1ST31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST31" } ] }, { "name": "TCHHL1", "type": "synonym", "evidence": [ { "id": "XP_003355237", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355237" } ] } ], "protein_names": [ { "name": "Trichohyalin like 1", "type": "synonym", "evidence": [ { "id": "F1ST31", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST31/entry#names_and_taxonomy" } ] }, { "name": "trichohyalin-like protein 1", "type": "synonym", "evidence": [ { "id": "XP_003355237", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355237" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST31", "url": "https://www.uniprot.org/uniprotkb/F1ST31" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TCHHL1", "url": "https://www.uniprot.org/uniprotkb/F1ST31", "locus": { "chromosome": "4", "start_pos": 97182540, "end_pos": 97177405, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006609", "url": "https://www.ensembl.org/id/ENSSSCG00000006609" } ] } } ], "crossref": [ { "id": "F1ST31", "url": "https://alphafold.ebi.ac.uk/entry/F1ST31", "database": "AlphaFoldDB", "categories": [] }, { "id": "cd00213", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00213", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100154311", "url": "https://www.ncbi.nlm.nih.gov/gene/100154311", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013787", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013787", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034325", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034325", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042937", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042937", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154311", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154311", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "REAKTHN", "url": "https://omabrowser.org/oma/group/REAKTHN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1ST31", "url": "https://www.orthodb.org/?gene=F1ST31", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47612", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47612", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47612:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47612:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003355237", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355237", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1ST31", "url": "https://www.uniprot.org/uniprotkb/F1ST31", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST31-1", "url": "https://www.uniprot.org/uniprotkb/F1ST31-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPRLLRDVLCVIETFHKYARGNGDEAVLTCRELKQLIQGEFGENLQPPVIHAIDRDLNLQDIDSNDTISFDEFVLAIFSLLNFCYLDIQSSLNSEPRQVSTLGEKPDDMDLQVTSVTGQQKEGLSPTQKKVVIPSVMASSPQLGPKEGGAVEYNRVDPQGDTTTHKLPIKASEHSDPKDQHLEGGEQSQEVAQDVLSRGNSGAQLETKKPTGSAQNSSLIKREGQDKEILREGDKPVREQSDTKTREEFREQEGKLETQNHPLEETRERPSKDQEVAGEKGGKDHSKTQELPLQRKDEPHSDYVDLSEQAAAQKPFQTQKSTDPEDDSGTAESQEPEEDASRMLPETKNLAEPEDDGRTSETQEPPVQEKEYEKKDMPLQGDSRNVSETPTVRAERKELRGPEVHQTAGQKESERRTQSPVLNGQTEDGKYWELQESSSKEKNAEEDSKTQELSSEGGDQKHSEIEGAISPEEEARHAEESTVEALESSKNASATEGIPGARERTQELTPLGKQSGEKNKRVAKTHYKPVKENDCYQGEDPEPKVTQNGEGSSETPSSLTPESGESSLETSDLPVQGDSQSQKDPPGASEQGSHNNNPDTQKQVALGEKNRSQEAVVLAVREDEQLTQEQVWPVGEEHKSQGSGTKGPGPAVEPDGHPDNNEKTLETEFPDALNAGFADQLPVRQLSSEKDSRKEPKVQGSSTKEEEDGAPEALVKNLDEYSSVSPKEPAVLEGNECPQELLLAKNVHDSSVPKSGLKERMQRDQELYSVERVAVHSSALYKYLQEKILQQIDITQKKHRDQAQTTSVSSPELRNDQISAFLTNEISDCPAFFTGSQALQQCTRELLLDEDPADAQLTAAPQALEDKQSHPQREELEPQREISTPKQ", "length": 887, "header": "tr|F1ST31-1|F1ST31_PIG Isoform 1 of Trichohyalin like 1 OS=Sus scrofa OX=9823 GN=TCHHL1 PE=4 SV=1 CANONICAL=F1ST31-1" }, "isoforms": [ { "isoform_ac": "F1ST31-1", "url": "https://www.uniprot.org/uniprotkb/F1ST31/entry#F1ST31-1", "sequence": { "sequence": "MPRLLRDVLCVIETFHKYARGNGDEAVLTCRELKQLIQGEFGENLQPPVIHAIDRDLNLQDIDSNDTISFDEFVLAIFSLLNFCYLDIQSSLNSEPRQVSTLGEKPDDMDLQVTSVTGQQKEGLSPTQKKVVIPSVMASSPQLGPKEGGAVEYNRVDPQGDTTTHKLPIKASEHSDPKDQHLEGGEQSQEVAQDVLSRGNSGAQLETKKPTGSAQNSSLIKREGQDKEILREGDKPVREQSDTKTREEFREQEGKLETQNHPLEETRERPSKDQEVAGEKGGKDHSKTQELPLQRKDEPHSDYVDLSEQAAAQKPFQTQKSTDPEDDSGTAESQEPEEDASRMLPETKNLAEPEDDGRTSETQEPPVQEKEYEKKDMPLQGDSRNVSETPTVRAERKELRGPEVHQTAGQKESERRTQSPVLNGQTEDGKYWELQESSSKEKNAEEDSKTQELSSEGGDQKHSEIEGAISPEEEARHAEESTVEALESSKNASATEGIPGARERTQELTPLGKQSGEKNKRVAKTHYKPVKENDCYQGEDPEPKVTQNGEGSSETPSSLTPESGESSLETSDLPVQGDSQSQKDPPGASEQGSHNNNPDTQKQVALGEKNRSQEAVVLAVREDEQLTQEQVWPVGEEHKSQGSGTKGPGPAVEPDGHPDNNEKTLETEFPDALNAGFADQLPVRQLSSEKDSRKEPKVQGSSTKEEEDGAPEALVKNLDEYSSVSPKEPAVLEGNECPQELLLAKNVHDSSVPKSGLKERMQRDQELYSVERVAVHSSALYKYLQEKILQQIDITQKKHRDQAQTTSVSSPELRNDQISAFLTNEISDCPAFFTGSQALQQCTRELLLDEDPADAQLTAAPQALEDKQSHPQREELEPQREISTPKQ", "length": 887, "header": "tr|F1ST31-1|F1ST31_PIG Isoform 1 of Trichohyalin like 1 OS=Sus scrofa OX=9823 GN=TCHHL1 PE=4 SV=1 CANONICAL=F1ST31-1" }, "locus": { "chromosome": "4", "start_pos": 97181536, "end_pos": 97178373, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007242.3", "url": "https://www.ensembl.org/id/ENSSSCT00000007242.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007047.1", "url": "https://www.ensembl.org/id/ENSSSCP00000007047.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST31", "url": "https://www.uniprot.org/uniprotkb/F1ST31" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154311", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154311", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZBF6-1", "protein_name": "Trichohyalin-like 1", "gene_name": "Tchhl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRLLRGIFCVIEIFHKYASEDGNKEAMLTHRELRQLLEGEIGDFLQPHVFHAVERKLNLLHFDRDGTISFEEFLLAIFSLLNPPYFDISLLNSEPRLMSKSEKTDAVDLGAITGSTQRVVGVGPTQERLIFPPEMSLSDQSRKEEGEAGDELMVSPWEDVKTHGLPRNVSEPNDPEKHQPKEDAQEIAQTVPAAEYDVVQYQRNTAVEVSKQSAGPTQEIPRQGNKTSRRQSDTKISDYVIQRPTDYEEHASATQDPILQKEDKVAGSAHTDLPVVAATGKSSQTQEVLEPTDDTRLSETQGTGKDAGRMPPETTHLEEPKADASASGSHSLPVQEREHVQSRSRNVSETSSRGDLEEECKEHERKTRSLAPEAETPDEKCQEFPGSQRENDVERGTAALDPSSGEGNQNLPEVKEESISEKKARHSEKDTVDTFAINKTSPAIEETPETRERSQELAPLEEQSQGKQHRAAKTHDESVRKEDHSEGEDPELSPTQSDEGFCETPNSLAPEVGKSSSEIAETRVPGESQRQVEHHGDAKQESHINNPDSQKQGVPGESNREQEEVVLSIQEDGQLPEEQEEEREE", "length": 586 }, "evidence": [ { "id": "F1ST31", "url": "https://omabrowser.org/oma/group/F1ST31/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MAV8-1", "protein_name": "Trichohyalin like 1", "gene_name": "TCHHL1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPQLLRDILCVIETFHKYAREDAATLTCTELKQLIQSEFEDIFQPCAIHAVERNLNLLNIDSNGAISFDEFVLAIFSFLNVCYLDTQSLLNSEPRQVSKPEGMPHDMGLQVTNETDQWTEGTSQTQDKVVLPSGTASSTHLSLEERAVEHNRVDPQGHTTAHKLPVETSEHSDSKNQHLKGDEQSQKVDQDVSATGDSRTQRETSKPMAGSEQISSHTKGEGQNKEILQKGDILARKQSGTETGGRFGEQEGSLGILHSPLEETTQRPGGSSEDQEVAGEKGVKGHPKSQEPSVQGKDEPSSEHVDLPKQAAARKPSQTQKSAAAKDESRTAETPEPPIQEKEYETRDLSVQGENRNVSETPMVRVERKGVRGPEVHQTVGQKQIEEKTQPPALEEPTEDKKYHELQESSKEKNAGEDSETHELNSEGGEQKDSESEGAISPGEEARHAEEGTAEALVNSKNAPEAEGTPGTRERIWELTTLENQSGEKNKMTTKIHDKLVKEDDGYQGEGSEPVATQNDERSPETPNSLTAEDGDSNSETSDLFVQGDSQSQTNPFRGSVQGSDSNNPETQKHLALSEEKRVQEAAVLAVRGEDEQVTEEHAQEHEGQGSATTGRGPAVEPRGHSDTQVFIVRDENTKSLEPGIPGAPNAGITKQLSVRQLPTKKDSRKELKDQSPSTKKEEDGALEAQEDLVKSLDENNAVSQKTCPATLEEETESPQQLAGEQSLSTKEHDPSVSESGLEERMQRDQELCLVERGAEHSSPLYEALQEKMLQQTNVTQGKHQNQAQTASVASPEIRRNQSSASLTNDSSDGLVFFIDRQALQKYIREFLPDEDPTGAQQISAPQALEDKQGRPQREELEPQKEASTPKQ", "length": 872 }, "evidence": [ { "id": "F1ST31", "url": "https://omabrowser.org/oma/group/F1ST31/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5QJ38-1", "protein_name": "Trichohyalin-like protein 1", "gene_name": "TCHHL1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPQLLRNVLCVIETFHKYASEDSNGATLTGRELKQLIQGEFGDFFQPCVLHAVEKNSNLLNIDSNGIISFDEFVLAIFNLLNLCYLDIKSLLSSELRQVTKPEKEKLDDVDVQATTGDGQWTVGTSPTQEKRMLPSGMASSSQLIPEESGAVGNNRVDPWREAKTHNFPGEASEHNDPKNKHLEGDEQSQEVAQDIQTTEDNEGQLKTNKPMAGSKKTSSPTERKGQDKEISQEGDEPAREQSVSKIRDQFGEQEGNLATQSSPPKEATQRPCEDQEVRTEKEKHSNIQEPPLQREDEPSSQHADLPEQAAARSPSQTQKSTDSKDVCRMFDTQEPGKDADQTPAKTKNLGEPEDYGRTSETQEKECETKDLPVQYGSRNGSETSDMRDERKERRGPEAHGTAGQKERDRKTRPLVLETQTQDGKYQELQGLSKSKDAEKGSETQYLSSEGGDQTHPELEGTAVSGEEAEHTKEGTAEAFVNSKNAPAAERTLGARERTQDLAPLEKQSVGENTRVTKTHDQPVEEEDGYQGEDPESPFTQSDEGSSETPNSLASEEGNSSSETGELPVQGDSQSQGDQHGESVQGGHNNNPDTQRQGTPGEKNRALEAVVPAVRGEDVQLTEDQEQPARGEHKNQGPGTKGPGAAVEPNGHPEAQESTAGDENRKSLEIEITGALDEDFTDQLSLMQLPGKGDSRNELKVQGPSSKEEKGRATEAQNTLLESLDEDNSASLKIQLETKEPVTSEEEDESPQELAGEGGDQKSPAKKEHNSSVPWSSLEKQMQRDQEPCSVERGAVYSSPLYQYLQEKILQQTNVTQEEHQKQVQIAQASGPELCSVSLTSEISDCSVFFNYSQASQPYTRGLPLDESPAGAQETPAPQALEDKQGHPQRERLVLQREASTTKQ", "length": 904 }, "evidence": [ { "id": "F1ST31", "url": "https://omabrowser.org/oma/group/F1ST31/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D3P1-1", "protein_name": "Trichohyalin-like protein 1", "gene_name": "Tchhl1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRLLRGVFCVVEIFHKYAIEDGGNQATLTRTELRQLLEGEIGDFLQPHVFHAVERKLNLLNFDRDGTISFEEFVLAIFSLLNPSYFDISLLNSEPRLMSKSEKIDAVDLGAIGGNIQQVVGVGPTQERLIFPSEMASSGQPSNEEGEVGDEPMVSPCEDIKTHSLPRNVSEPNDPENQQPKEDAQEVAQNVPATEYDGVQFKRNTVVEVPKQSTSPTQEIPRERSKPSRRLSDTKISDHMIQRPTEDEEHTSTTQDPFLQKRDKATGSENTDLSVVAATRKSSQTQEIFEPMDDTKLSEAQETGKDAGRIPPETNLEEPKADAKVAESHGLPAQEREHNTRDQSVQSRSRNVSETSSRGEQEGEWKEHERITLSPTADAETQDEKCQEFPGSWRENDAKKDSAAKDPSSEEGNQNLPEIKEDSVSGKEARHSEEDTVYAFEINKNSPAAEETLETRERSQELAPLEKQSQRKKHRATRIQDKPVRKEDHNEGEDSELSLTQSDEGFCEIPNSLAPEVGKSSSEIAEPHVPEDSQSQIDHHGDAKQESHTNNPDPQKQGAPGESSREQEAVVLSIQEDGQLPEGQEQSARDGLHDGLSSRTKGGPGAAVEPSEGEEVQEATAGRENRKALEAESLEAQ", "length": 638 }, "evidence": [ { "id": "F1ST31", "url": "https://omabrowser.org/oma/group/F1ST31/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "transition metal ion binding", "id": "GO:0046914", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046914", "evidence": [ { "database": "UniProtKB", "id": "F1ST31", "url": "https://www.uniprot.org/uniprotkb/F1ST31" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 216, "end_pos": 218, "annotation": "n_glycosylation_sequon" }, { "start_pos": 385, "end_pos": 387, "annotation": "n_glycosylation_sequon" }, { "start_pos": 491, "end_pos": 493, "annotation": "n_glycosylation_sequon" }, { "start_pos": 610, "end_pos": 612, "annotation": "n_glycosylation_sequon" }, { "start_pos": 65, "end_pos": 67, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028089", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028089", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21444", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21444", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21444:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21444:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14643", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14643", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14644", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14644", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FHV4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FHV4", "database": "UniProtKB", "categories": [ "Protein" ] }, 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"length": 1627, "header": "tr|A0A8W4FHV4-1|A0A8W4FHV4_PIG Computationally mapped isoform of Coiled-coil domain containing 180 OS=Sus scrofa OX=9823 GN=CCDC180 PE=4 SV=1 CANONICAL=F1ST51-1" }, "locus": { "chromosome": "1", "start_pos": 239270775, "end_pos": 239210151, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102688.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102688.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078461.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078461.1" } ] } }, { "isoform_ac": "F1ST51-1", "url": "https://www.uniprot.org/uniprotkb/F1ST51/entry#F1ST51-1", "sequence": { "sequence": 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"length": 1671, "header": "tr|F1ST51-1|F1ST51_PIG Isoform 1 of Coiled-coil domain containing 180 OS=Sus scrofa OX=9823 GN=CCDC180 PE=4 SV=5 CANONICAL=F1ST51-1" }, "locus": { "chromosome": "1", "start_pos": 239270775, "end_pos": 239209954, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005904.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005904.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005757.5", "url": "https://www.ensembl.org/id/ENSSSCP00000005757.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST51", "url": "https://www.uniprot.org/uniprotkb/F1ST51" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 1050, "end_pos": 1052, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1105, "end_pos": 1107, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1142, "end_pos": 1144, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1389, "end_pos": 1391, "annotation": "n_glycosylation_sequon" }, { "start_pos": 230, "end_pos": 232, "annotation": "n_glycosylation_sequon" }, { "start_pos": 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF14644" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF4456", "eco_id": "ECO_0000259", "start_pos": 1360, "end_pos": 1562, "start_aa": "Asp", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1050, "end_pos": 1052 }, { "start_pos": 1105, "end_pos": 1107 }, { "start_pos": 1142, "end_pos": 1144 }, { "start_pos": 1389, "end_pos": 1391 }, { "start_pos": 230, "end_pos": 232 }, { "start_pos": 388, "end_pos": 390 }, { "start_pos": 410, "end_pos": 412 }, { "start_pos": 988, "end_pos": 990 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", 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"uniprot_canonical_ac": "F1ST61-1", "uniprot_ac": "F1ST61", "uniprot_id": "F1ST61_PIG", "mass": { "chemical_mass": 52232.0, "monoisotopic_mass": 52232.0 }, "refseq": { "ac": "XP_003134920", "name": "cerebral cavernous malformations 2 protein isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134920" }, "gene_names": [ { "name": "CCM2", "type": "recommended", "evidence": [ { "id": "F1ST61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST61" } ] }, { "name": "CCM2", "type": "synonym", "evidence": [ { "id": "XP_003134920", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134920" } ] } ], "protein_names": [ { "name": "CCM2 scaffold protein", "type": "synonym", "evidence": [ { "id": "F1ST61", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST61/entry#names_and_taxonomy" } ] }, { "name": "cerebral cavernous malformations 2 protein isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003134920", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134920" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST61", "url": "https://www.uniprot.org/uniprotkb/F1ST61" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCM2", "url": "https://www.uniprot.org/uniprotkb/F1ST61", "locus": { "chromosome": "18", "start_pos": 50396424, "end_pos": 50450132, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016734", "url": "https://www.ensembl.org/id/ENSSSCG00000016734" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016734", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016734", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13166", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13166", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd13516", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13516", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100511907", "url": "https://www.ncbi.nlm.nih.gov/gene/100511907", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026159", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026159", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032375", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032375", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511907", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511907", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LKTXDSS", "url": "https://omabrowser.org/oma/group/LKTXDSS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1ST61", "url": "https://www.orthodb.org/?gene=F1ST61", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21642", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21642", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21642:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21642:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF16545", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF16545", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003134920", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003134920", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZWP0", "url": "https://www.uniprot.org/uniprotkb/A0A286ZWP0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZWP0-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZWP0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ABS0", "url": "https://www.uniprot.org/uniprotkb/A0A287ABS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ABS0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ABS0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATH5", "url": "https://www.uniprot.org/uniprotkb/A0A287ATH5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ATH5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ATH5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5L8", "url": "https://www.uniprot.org/uniprotkb/A0A287B5L8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5L8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5L8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG76", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG76", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QG76-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QG76-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST61", "url": "https://www.uniprot.org/uniprotkb/F1ST61", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST61-1", "url": "https://www.uniprot.org/uniprotkb/F1ST61-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MHGSSRQRGRNQDSSREIAAHTGFPTGCSVENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDLKEPYETEASTFTFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRTMSSTSTSTSNGNRAAGSSDDQSAPSEGDEWDRMISDISNDIEALGCSMDPDSA", "length": 476, "header": "tr|F1ST61-1|F1ST61_PIG Isoform 1 of CCM2 scaffold protein OS=Sus scrofa OX=9823 GN=CCM2 PE=3 SV=2 CANONICAL=F1ST61-1" }, "isoforms": [ { "isoform_ac": "A0A286ZWP0-1", "url": "https://www.uniprot.org/uniprotkb/F1ST61/entry#A0A286ZWP0-1", "sequence": { "sequence": "MEEESKKGKKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDLKEPYETEASTFTFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRTMSSTSTSTSNGNRAAGSSDDQSAPSEGDEWDRMISDISNDIEALGCSMDPDSA", "length": 395, "header": "tr|A0A286ZWP0-1|A0A286ZWP0_PIG Computationally mapped isoform of CCM2 scaffold protein OS=Sus scrofa OX=9823 GN=CCM2 PE=3 SV=1 CANONICAL=F1ST61-1" }, "locus": { "chromosome": "18", "start_pos": 50450019, "end_pos": 50396671, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053702.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053702.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036042.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036042.1" } ] } }, { "isoform_ac": "A0A287ABS0-1", "url": "https://www.uniprot.org/uniprotkb/F1ST61/entry#A0A287ABS0-1", "sequence": { "sequence": "MEEESKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDLKEPYETEASTFTFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRTMSSTSTSTSNGNRAAGSSDDQSAPSEGDEWDRMISDISNDIEALGCSMDPDSA", "length": 453, "header": "tr|A0A287ABS0-1|A0A287ABS0_PIG Computationally mapped isoform of CCM2 scaffold protein OS=Sus scrofa OX=9823 GN=CCM2 PE=3 SV=1 CANONICAL=F1ST61-1" }, "locus": { "chromosome": "18", "start_pos": 50450019, "end_pos": 50396671, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041491.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041491.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041256.1", "url": "https://www.ensembl.org/id/ENSSSCP00000041256.1" } ] } }, { "isoform_ac": "A0A287ATH5-1", "url": "https://www.uniprot.org/uniprotkb/F1ST61/entry#A0A287ATH5-1", "sequence": { "sequence": "RLPQQCPRADCTVSAASAGGHGLCVLEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDLKEPYETEASTFTFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRTMSSTSTSTSNGNRAAGSSDDQSAPSEGDEWDRMISDISNDIEALGCSMDPDSA", "length": 470, "header": "tr|A0A287ATH5-1|A0A287ATH5_PIG Computationally mapped isoform of CCM2 scaffold protein OS=Sus scrofa OX=9823 GN=CCM2 PE=3 SV=1 CANONICAL=F1ST61-1" }, "locus": { "chromosome": "18", "start_pos": 50430094, "end_pos": 50396671, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054880.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054880.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047167.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047167.1" } ] } }, { "isoform_ac": "A0A287B5L8-1", "url": "https://www.uniprot.org/uniprotkb/F1ST61/entry#A0A287B5L8-1", "sequence": { "sequence": "GSSRQRGRNQDSSREIAAHTGFPTGCSVENEVPPRTPRHLSVPGAWQPPPAHHGQGRSPCRTGPPFSVACLLPSGGDSPYRLGYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDLKEPYETEASTFTFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRTMSSTSTSTSNGNRAAGSSDDQSAPSEGDEWDRMISDISNDIEALGCSMDPDSA", "length": 468, "header": "tr|A0A287B5L8-1|A0A287B5L8_PIG Computationally mapped isoform of CCM2 scaffold protein OS=Sus scrofa OX=9823 GN=CCM2 PE=3 SV=1 CANONICAL=F1ST61-1" }, "locus": { "chromosome": "18", "start_pos": 50429534, "end_pos": 50396671, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043444.2", "url": "https://www.ensembl.org/id/ENSSSCT00000043444.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051749.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051749.2" } ] } }, { "isoform_ac": "A0A5G2QG76-1", "url": "https://www.uniprot.org/uniprotkb/F1ST61/entry#A0A5G2QG76-1", "sequence": { "sequence": "MHGSSRQRGRNQDSSREIAAHTGFPTGCSVENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDLKEPYETEASTFTFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGESRTNRGPVRSGSQPVGPRGPAPGEAAEGPRGARRRARQEPCCLSRARGGSAEEWSGASPRTRGSGVGARLCSWPAPAPFQTRPSGATATARVGPDRAAGGVGASGPWGPSGRQACAFRGRRRGRRAACLQVCGPSSLRRTASTSRTFWRPSA", "length": 537, "header": "tr|A0A5G2QG76-1|A0A5G2QG76_PIG Computationally mapped isoform of CCM2 scaffold protein OS=Sus scrofa OX=9823 GN=CCM2 PE=3 SV=1 CANONICAL=F1ST61-1" }, "locus": { "chromosome": "18", "start_pos": 50429540, "end_pos": 50396883, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088346.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088346.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063757.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063757.1" } ] } }, { "isoform_ac": "F1ST61-1", "url": "https://www.uniprot.org/uniprotkb/F1ST61/entry#F1ST61-1", "sequence": { "sequence": "MHGSSRQRGRNQDSSREIAAHTGFPTGCSVENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDLKEPYETEASTFTFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRTMSSTSTSTSNGNRAAGSSDDQSAPSEGDEWDRMISDISNDIEALGCSMDPDSA", "length": 476, "header": "tr|F1ST61-1|F1ST61_PIG Isoform 1 of CCM2 scaffold protein OS=Sus scrofa OX=9823 GN=CCM2 PE=3 SV=2 CANONICAL=F1ST61-1" }, "locus": { "chromosome": "18", "start_pos": 50429540, "end_pos": 50396671, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018216.3", "url": "https://www.ensembl.org/id/ENSSSCT00000018216.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017725.2", "url": "https://www.ensembl.org/id/ENSSSCP00000017725.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST61", "url": "https://www.uniprot.org/uniprotkb/F1ST61" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511907", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511907", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZT10-1", "protein_name": "CCM2 scaffold protein", "gene_name": "Ccm2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSRCSPHPLSPLSPPVCPQHLVFYLRPRLTGILQSSCLRITFLVQPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLALPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDKAKRSHQLPGHLTQEHDAVLSLSAYNVKLAWRDGEDIILRVPIHDIAAVSYVRDDAAHLVVLKTAQDPGISPSQSLCAEGSRGLSAGSLSESAVGPVEACCLVIMATESKVAAEELCSLLSQVFQIVYTESTIDFLDRAIFDGASTPTHHLSVHSDDSSTKVDMKDSYDADASTFCFPDSGDVGGLPPLPFCMQASPHSKTVSESELSTSATELLQDYMLTLRTKLSSQEIQQFAALLHEYRNGASIHEFCISLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRHRRALSTTSTSTTNGNRTTGSPDDRSAPSEGDEWDRMISDISSDIEALGCSMDQDSA", "length": 489 }, "evidence": [ { "id": "F1ST61", "url": "https://omabrowser.org/oma/group/F1ST61/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V1AA01-1", "protein_name": "CCM2 scaffolding protein", "gene_name": "CCM2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "GAVAVGCSHHAHQPTSWRAVFLWSCCPPTFFREQRSNSSGWQEPGIVSPFKRVFLKGEKGRDKKAQEKVTERRPLHTVVVSLPDRVEPDILLNDYIEKEVKYLGQLTSVPGYLNPSSRTEILHLIDNAKRAHQLPGQLTQEHDAVISLSAYNIKLVWRDGEDLILRVPIHDIASVSYIRDDSAHLVVLKTAQDPGISPSQSLSAESSKALTSGSLSESGVVPVEACCLVVLATENKVTAEELCSLLSQVFQIVYTESTIDFLDRAIFDGASTPTRHMSLHSDDSSTKVDVKESYETEASTVSFPETLDAGDNSPSSFLTQQSPHIKTISESELSTTATELLQDYMMTLRTKLSSQEIQQFAMLLHEYRNGASIHEFCINLKQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRTLSTTSNSTTNGNGAAGSSDDQSVPSEEDEWDRMISHISNDIEALGCSMDRDSS", "length": 486 }, "evidence": [ { "id": "F1ST61", "url": "https://omabrowser.org/oma/group/F1ST61/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1B8H2-1", "protein_name": "CCM2 scaffold protein", "gene_name": "CCM2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MHSNCRQRGRNQNSSREIPPQTDFPTGYPMENEPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVISLSAYNVKLAWRDGEDTILRVPIHDIAAVSYVRDDASHLVVLKTAQDPGISPSQSLCAESSRGLTTGSLSESGVGPVEACCLVILAAESKVAAEELCSLLGQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDMKEPYETEASTFSFPECAHAGGVSPLSFCMQTAPHAKTVSESELSATAAELLQDYMLTLRTKLSSQEIQQFAALLHEYRDGASVHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRYRRATSSTSTSTSNGNRAAGSSDDQSVPSEGDEWDRMISDISNDIEALGCSMDQDSA", "length": 476 }, "evidence": [ { "id": "F1ST61", "url": "https://omabrowser.org/oma/group/F1ST61/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6DRP4-1", "protein_name": "Cerebral cavernous malformations protein 2 homolog", "gene_name": "ccm2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"MEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLALPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDKAKRSHQLPGHLTQEHDAVLSLSAYNVKLAWRDGEDIILRVPIHDIAAVSYVRDDAAHLVVLKTAQDPGISPSQSLCAESSRGLSAGSLSESAVGPVEACCLVIMATESKVAAEELCSLLSQVFQIVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDMKDSYDADASTFCFPDSGDVGGLPPLPFCMQTSPHSKTVSESELSTSATELLQDYMLTLRTKLSSQEIQQFAALLHEYRNGASIHEFCISLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRHRRALSTTSTSTINGNRTTGSPDDRSAPSEGDEWDRMISDISSDIEALGCSMDQDSA", "length": 453 }, "evidence": [ { "id": "F1ST61", "url": "https://omabrowser.org/oma/group/F1ST61/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BSQ5-1", "protein_name": "Cerebral cavernous malformations 2 protein", "gene_name": "CCM2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEEGKKGKKPGIVSPFKRVFLKGEKSRDKKAHEKVTERRPLHTVVLSLPERVEPDRLLSDYIEKEVKYLGQLTSIPGYLNPSSRTEILHFIDNAKRAHQLPGHLTQEHDAVLSLSAYNVKLAWRDGEDIILRVPIHDIAAVSYVRDDAAHLVVLKTAQDPGISPSQSLCAESSRGLSAGSLSESAVGPVEACCLVILAAESKVAAEELCCLLGQVFQVVYTESTIDFLDRAIFDGASTPTHHLSLHSDDSSTKVDIKETYEVEASTFCFPESVDVGGASPHSKTISESELSASATELLQDYMLTLRTKLSSQEIQQFAALLHEYRNGASIHEFCINLRQLYGDSRKFLLLGLRPFIPEKDSQHFENFLETIGVKDGRGIITDSFGRHRRALSTTSSSTTNGNRATGSSDDRSAPSEGDEWDRMISDISSDIEALGCSMDQDSA", "length": 444 }, "evidence": [ { "id": "F1ST61", "url": "https://omabrowser.org/oma/group/F1ST61/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "vasculogenesis", "id": "GO:0001570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001570", "evidence": [ { "database": "UniProtKB", "id": "F1ST61", "url": "https://www.uniprot.org/uniprotkb/F1ST61" } ], "pmid": "" }, { "name": "heart development", "id": "GO:0007507", 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"snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST72", "url": "https://www.uniprot.org/uniprotkb/F1ST72" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TOMM5", "url": "https://www.uniprot.org/uniprotkb/F1ST72", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000050320", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000050320", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100520533", "url": "https://www.ncbi.nlm.nih.gov/gene/100520533", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019603", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019603", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520533", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520533", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QIYCSSE", "url": "https://omabrowser.org/oma/group/QIYCSSE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1ST72", "url": "https://www.orthodb.org/?gene=F1ST72", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR28436", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28436", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR28436:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR28436:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10642", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10642", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5205685", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5205685", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003122069", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122069", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1ST72", "url": "https://www.uniprot.org/uniprotkb/F1ST72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST72-1", "url": "https://www.uniprot.org/uniprotkb/F1ST72-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFRIEGLAPKLDPEEMKRKMREDVISSIRNFLIYVALLRVTPFILKKLDSI", "length": 51, "header": "tr|F1ST72-1|F1ST72_PIG Isoform 1 of Translocase of outer mitochondrial membrane 5 OS=Sus scrofa OX=9823 GN=TOMM5 PE=3 SV=4 CANONICAL=F1ST72-1" }, "isoforms": [ { "isoform_ac": "F1ST72-1", "url": "https://www.uniprot.org/uniprotkb/F1ST72/entry#F1ST72-1", "sequence": { "sequence": "MFRIEGLAPKLDPEEMKRKMREDVISSIRNFLIYVALLRVTPFILKKLDSI", "length": 51, "header": "tr|F1ST72-1|F1ST72_PIG Isoform 1 of Translocase of outer mitochondrial membrane 5 OS=Sus scrofa OX=9823 GN=TOMM5 PE=3 SV=4 CANONICAL=F1ST72-1" }, "locus": { "chromosome": "1", "start_pos": 238332978, "end_pos": 238329231, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098057.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098057.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075096.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075096.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST72", "url": "https://www.uniprot.org/uniprotkb/F1ST72" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520533", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520533", "resource": "KEGG Pathway" }, { "id": "R-SSC-5205685", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5205685", "resource": "Reactome", "description": "PINK1-PRKN Mediated Mitophagy" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0X9V5-1", "protein_name": "Translocase of outer mitochondrial membrane 5", "gene_name": "TOMM5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { 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"uniprot_canonical_ac": "F1ST85-1", "uniprot_ac": "F1ST85", "uniprot_id": "F1ST85_PIG", "mass": { "chemical_mass": 57713.0, "monoisotopic_mass": 57713.0 }, "refseq": {}, "gene_names": [ { "name": "RNF38", "type": "recommended", "evidence": [ { "id": "F1ST85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST85" } ] } ], "protein_names": [ { "name": "Ring finger protein 38", "type": "synonym", "evidence": [ { "id": "F1ST85", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST85/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST85", "url": "https://www.uniprot.org/uniprotkb/F1ST85" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RNF38", "url": "https://www.uniprot.org/uniprotkb/F1ST85", "locus": { "chromosome": "1", "start_pos": 237111012, "end_pos": 237235485, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005343", "url": "https://www.ensembl.org/id/ENSSSCG00000005343" } ] } } ], "crossref": [ { "id": "F1ST85", "url": "https://alphafold.ebi.ac.uk/entry/F1ST85", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000005343", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005343", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd16679", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd16679", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR46171", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46171", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46171:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46171:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13639", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13639", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A6P9", "url": "https://www.uniprot.org/uniprotkb/A0A287A6P9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A6P9-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A6P9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI64", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI64", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FI64-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FI64-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST85", "url": "https://www.uniprot.org/uniprotkb/F1ST85", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST85-1", "url": "https://www.uniprot.org/uniprotkb/F1ST85-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "RTRKISPGANSAPLPGHPNKVICERVRLQSLFPLLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE", "length": 515, "header": "tr|F1ST85-1|F1ST85_PIG Isoform 1 of Ring finger protein 38 OS=Sus scrofa OX=9823 GN=RNF38 PE=4 SV=5 CANONICAL=F1ST85-1" }, "isoforms": [ { "isoform_ac": "A0A287A6P9-1", "url": "https://www.uniprot.org/uniprotkb/F1ST85/entry#A0A287A6P9-1", "sequence": { "sequence": "MEEGSVGASFQCQSIHHDHICHDDSDKISPGANSAPLPGHPNKVICERSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE", "length": 509, "header": "tr|A0A287A6P9-1|A0A287A6P9_PIG Computationally mapped isoform of Ring finger protein 38 OS=Sus scrofa OX=9823 GN=RNF38 PE=4 SV=2 CANONICAL=F1ST85-1" }, "locus": { "chromosome": "1", "start_pos": 237235206, "end_pos": 237114359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042166.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042166.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000039551.2", "url": "https://www.ensembl.org/id/ENSSSCP00000039551.2" } ] } }, { "isoform_ac": "A0A8W4FI64-1", "url": "https://www.uniprot.org/uniprotkb/F1ST85/entry#A0A8W4FI64-1", "sequence": { "sequence": "RTRKSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE", "length": 465, "header": "tr|A0A8W4FI64-1|A0A8W4FI64_PIG Computationally mapped isoform of Ring finger protein 38 OS=Sus scrofa OX=9823 GN=RNF38 PE=4 SV=1 CANONICAL=F1ST85-1" }, "locus": { "chromosome": "1", "start_pos": 237171761, "end_pos": 237114359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097528.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097528.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079136.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079136.1" } ] } }, { "isoform_ac": "F1ST85-1", "url": "https://www.uniprot.org/uniprotkb/F1ST85/entry#F1ST85-1", "sequence": { "sequence": "RTRKISPGANSAPLPGHPNKVICERVRLQSLFPLLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE", "length": 515, "header": "tr|F1ST85-1|F1ST85_PIG Isoform 1 of Ring finger protein 38 OS=Sus scrofa OX=9823 GN=RNF38 PE=4 SV=5 CANONICAL=F1ST85-1" }, "locus": { "chromosome": "1", "start_pos": 237171761, "end_pos": 237114359, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005882.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005882.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005736.5", "url": "https://www.ensembl.org/id/ENSSSCP00000005736.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 405, "start_aa": "Thr", "end_pos": 405, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr405", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST85", "url": "https://www.uniprot.org/uniprotkb/F1ST85" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1ST85", "url": "https://www.uniprot.org/uniprotkb/F1ST85" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1ST85", "url": "https://www.uniprot.org/uniprotkb/F1ST85" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F1ST85", "url": "https://www.uniprot.org/uniprotkb/F1ST85" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1ST87-1", "uniprot_ac": "F1ST87", "uniprot_id": "F1ST87_PIG", "mass": { "chemical_mass": 66818.0, "monoisotopic_mass": 66818.0 }, "refseq": { "ac": "XP_003122047", "name": "calicin", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122047" }, "gene_names": [ { "name": "CCIN", "type": "recommended", "evidence": [ { "id": "F1ST87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST87" } ] }, { "name": "CCIN", "type": "synonym", "evidence": [ { "id": "XP_003122047", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122047" } ] } ], "protein_names": [ { "name": "Calicin", "type": "recommended", "evidence": [ { "id": "F1ST87", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST87/entry#names_and_taxonomy" } ] }, { "name": "calicin", "type": "synonym", "evidence": [ { "id": "XP_003122047", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122047" } ] } ], "function": [ { "annotation": "Required for both nuclear and acrosomal shaping during spermiogenesis.", "evidence": [ { "database": "UniProtKB", "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87#function" }, { "database": "UniProtKB", "id": "ARBA00053335", "url": "https://www.uniprot.org/uniprotkb/ARBA00053335#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CCIN", "url": "https://www.uniprot.org/uniprotkb/F1ST87", "locus": { "chromosome": "1", "start_pos": 236950402, "end_pos": 236948636, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000005340", "url": "https://www.ensembl.org/id/ENSSSCG00000005340" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005340", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005340", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd18307", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd18307", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100515522", "url": "https://www.ncbi.nlm.nih.gov/gene/100515522", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000210", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000210", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011705", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011705", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017096", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017096", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048070", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048070", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100515522", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515522", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MPYKAAA", "url": "https://omabrowser.org/oma/group/MPYKAAA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1ST87", "url": "https://www.orthodb.org/?gene=F1ST87", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45632", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45632", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45632:SF30", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45632:SF30", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00651", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00651", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07707", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07707", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13964", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13964", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003122047", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003122047", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST87-1", "url": "https://www.uniprot.org/uniprotkb/F1ST87-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKLEFTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHRNVLAAVSPLVKSLISNHDMKTTDELFITIDPNYLSPTTVDHLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRIHCNDFLIKSIRRANCLRYLFLAELFELKEVSDLAYSGIRDNFHYWASPEGSLHFMRCPPVIFGRLLRDENLHVLNEDQALQALLSWVYFRKDEREKYFKKFFNYINLNAVSNKTLMYASNKLMGMENSSAHSTLIESVLVDRKQERPTSLLSYQRKGALLDSVVILGGQKAHGKFNDGVFAYIIQENLWLKLSEMPYRAAALSATAAGRYIYISGGTTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIFRYDERKEAWCLAGKMSIPMDGTAVITKGDRNLYIVTGRCLVKGYISRVGVVDCFDTNTGDVVQCITFPIEFNHRPLLSFHQDNILCVYSHRQSVEINLQKIKANKTTTSVPLLPNNCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAYLLDQKTGEWKTLAPPPEALDCPACCLAKLPCKILQRI", "length": 588, "header": "tr|F1ST87-1|F1ST87_PIG Isoform 1 of Calicin OS=Sus scrofa OX=9823 GN=CCIN PE=4 SV=1 CANONICAL=F1ST87-1" }, "isoforms": [ { "isoform_ac": "F1ST87-1", "url": "https://www.uniprot.org/uniprotkb/F1ST87/entry#F1ST87-1", "sequence": { "sequence": "MKLEFTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHRNVLAAVSPLVKSLISNHDMKTTDELFITIDPNYLSPTTVDHLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRIHCNDFLIKSIRRANCLRYLFLAELFELKEVSDLAYSGIRDNFHYWASPEGSLHFMRCPPVIFGRLLRDENLHVLNEDQALQALLSWVYFRKDEREKYFKKFFNYINLNAVSNKTLMYASNKLMGMENSSAHSTLIESVLVDRKQERPTSLLSYQRKGALLDSVVILGGQKAHGKFNDGVFAYIIQENLWLKLSEMPYRAAALSATAAGRYIYISGGTTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIFRYDERKEAWCLAGKMSIPMDGTAVITKGDRNLYIVTGRCLVKGYISRVGVVDCFDTNTGDVVQCITFPIEFNHRPLLSFHQDNILCVYSHRQSVEINLQKIKANKTTTSVPLLPNNCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAYLLDQKTGEWKTLAPPPEALDCPACCLAKLPCKILQRI", "length": 588, "header": "tr|F1ST87-1|F1ST87_PIG Isoform 1 of Calicin OS=Sus scrofa OX=9823 GN=CCIN PE=4 SV=1 CANONICAL=F1ST87-1" }, "locus": { "chromosome": "1", "start_pos": 236950399, "end_pos": 236948636, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005879.2", "url": "https://www.ensembl.org/id/ENSSSCT00000005879.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005733.1", "url": "https://www.ensembl.org/id/ENSSSCP00000005733.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515522", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515522", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q13939-1", "protein_name": "Calicin", "gene_name": "CCIN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKLEFTEKNYNSFVLQNLNRQRKRKEYWDMALSVDNHVFFAHRNVLAAVSPLVRSLISSNDMKTADELFITIDTSYLSPVTVDQLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRVHCNDFLIKSICRANCLRYLFLAELFELKEVSDVAYSGIRDNFHYWASPEGSMHFMRCPPVIFGRLLRDENLHVLNEDQALSALINWVYFRKEDREKYFKKFFNYINLNAVSNKTLVFASNKLVGMENTSSHTTLIESVLMDRKQERPCSLLVYQRKGALLDSVVILGGQKAHGQFNDGVFAYIIQENLWMKLSDMPYRAAALSATSAGRYIYISGGTTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIYRYDERKEVWCLAGKMSIPMDGTAVITKGDRHLYIVTGRCLVKGYISRVGVVDCFDTSTGDVVQCITFPIEFNHRPLLSFQQDNILCVHSHRQSVEINLQKVKASKTTTSVPVLPNSCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAFLLDQKTGKWKTLAPPPEALDCPACCLAKLPCKILQRI", "length": 588 }, "evidence": [ { "id": "F1ST87", "url": "https://omabrowser.org/oma/group/F1ST87/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q28068-1", "protein_name": "Calicin", "gene_name": "CCIN", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLEFTEKNYNSFVLQNLNKQRKRKEYWDIALTVDHHVFFAHRNVLAAVSPLVKNLISNHDMKTTDELFITIDPNYLSPTTVDQLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRIHCNDFLIKSIRRANCLRYLFLAELFELKEVSDLAYSGIRDNFHYWASPEGCVHFMRCPPVIFGRLLRDENLHVLNEDQALNALINWVCFRKDEREKYFKKFFNYINLNAVSNKTLMYASNKLMGMENSSAHSTLIESVLVDRKQERPTSLLSYQRKGALLDSVVILGGQKAHGKFNDGVFAYIIQENLWLKLSEMPYRAAALSATSAGRYIYISGGTTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIYRYDERKETWCLAGKMSIPMDGTAVITRGDRNLYIVTGRCLVKGYISRVGVVDCFDTNTGEVVQCITFPIEFNHRPLLSFHQDNILCVYSHRQSVEINLQKVKANKTTTSVPLLPNNCPLDVSHAICSVGDNKVFVCGGVTTTTDVQTKDYTINPNAYLLDQKAGEWKTLAPPPEALDCPACCLAKLPCKILQRI", "length": 588 }, "evidence": [ { "id": "F1ST87", "url": "https://omabrowser.org/oma/group/F1ST87/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5XI58-1", "protein_name": "Calicin", "gene_name": "Ccin", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLEFTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHRNVLAAVSPLVKSLVSSNDMKTTDELYITIDPNYLSPATVDQLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRIHCNDFLIKSIRRVNCLRYLFLAELFELKEVSDLAYSGIRDNFHFWASPEGSMHFMRCPPVIFGRLLRDENLHVLNEDQALSALINWVYFRKEEREKYFKKFFNYINLNAVSNKTLMFASNKLTGLENNSAHATLIESVLMDRKQERPCSLLSYQRKGALLDSVVILGGQKAHGKFNDGVFAYIIQENLWLKLSEMPYRAAALSATAAGRYIYISGGTTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIYRYDERKEAWCLAGKMSIPMDGTAVITKGDRNLYIVTGRCLVKGYISRVGVVDCFDTCTGEVVQCITFPIEFNHRPLLSFHQDNILRVHSHRQSVEINLQKIKANKSTTSVPLLPNSCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAYLLDQKIGEWKTLACPPEALDCPACCLAKLPCKILQRI", "length": 588 }, "evidence": [ { "id": "F1ST87", "url": "https://omabrowser.org/oma/group/F1ST87/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CDE2-1", "protein_name": "Calicin", "gene_name": "Ccin", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLEFTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHRNVLAAVSPLVKSLISSNDMKTTDELYITIDPNYLSPATVDQLLDYFYSGKVVISEQNVEELLRGAQYFNTPRLRIHCNDFLIKSIRRVNCLRYLFLAELFELKEVSDLAYSGIRDNFHFWASPEGSMHFMRCPPVIFGRLLRDENLHVLNEDQALSALISWVYFRKEEREKYFKKFFNYINLNAVSNKTLMFASNKLVGLENNSAHATLIESVLMDRKQERPCSLLSYQRKGALLDSVVILGGQKAHGKFNDGVFAYIIQENLWLKLSEMPYRAAALSATAAGRYIYISGGTTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSNIYRYDERKEAWCLAGKMSIPMDGTAVITKGDRNLYIVTGRCLVKGYISRVGVVDCFDTCTGEVVQCITFPIEFNHRPLLSFHQDNILRVHSHRQSVEINLQKIKANKSTTSVPLLPNSCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAYLLDQKIGEWQTLACPPEALDCPACCLAKLPCKILQRI", "length": 588 }, "evidence": [ { "id": "F1ST87", "url": "https://omabrowser.org/oma/group/F1ST87/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87" } ], "pmid": "" }, { "name": "cytoskeletal calyx", "id": "GO:0033150", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033150", "evidence": [ { "database": "UniProtKB", "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87" } ], "pmid": "" }, { "name": "Cul3-RING ubiquitin ligase complex", "id": "GO:0031463", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031463", "evidence": [ { "database": "UniProtKB", "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87" } ], "pmid": "" }, { "name": "sperm glycocalyx", "id": "GO:0120238", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120238", "evidence": [ { "database": "UniProtKB", "id": "F1ST87", "url": "https://www.uniprot.org/uniprotkb/F1ST87" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 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"2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1STE3", "url": "https://www.uniprot.org/uniprotkb/F1STE3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523366", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523366", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1BGA2-1", "protein_name": "MIT domain-containing protein 1", "gene_name": "MITD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRSSLAQDPGSTAALTVLKRALDLESESRGPQALVCYQEGIDLLLQVLKGTKDETKKRNLRKIISDHMDRAEHLKKRLDQEKEAGKYHKQIKIEENATGFSYESLFQEYLSETVTEVWIEDPYIRHTHQLYNFLRFCEMLVKRPCKVKTIHLLTSLDEGTGKDQHSGLEEIKQSLRNHGVSLELEYSSSIHDREIRFNNGWIIKIGRGLDYFKKPQSRFSLGYCDFDLRPCHETTVDIFHNKHTKKI", "length": 248 }, "evidence": [ { "id": "F1STE3", "url": "https://omabrowser.org/oma/group/F1STE3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1P5I2-1", "protein_name": "Microtubule interacting and trafficking domain containing 1", "gene_name": "MITD1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSRAGGDGTTALERAGAETVKRAVELDLASRFQESLVCYQEGIDLLLQVVKGTKDEAKKQRYRQKISEYMTRAEDIKKHIEKEKQDGKYHKQIKIEENATGFGYEKLFQEYLTEIVSEVWVEDPYIRNVHQLYNFLRFCEMLVKGPCKVRTIHLLTSYDEGNGRNQQTSGLEEIKQSLRNHGITLNVAFSSSIHDREIRFNNGWMIKIGRGLDYFKKPQGRFSIGYCDFDLRPCHETTVDVFHTKHTKKM", "length": 250 }, "evidence": [ { "id": "F1STE3", "url": "https://omabrowser.org/oma/group/F1STE3/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3I701-1", "protein_name": "MIT domain-containing protein 1", "gene_name": "Mitd1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKSSLGQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTRDSSKRCVLRTKISDYMDRAENIKKYLDQEKEDGKYHKQIKIEENATGFSYETLFKEYLHETVTEVWIEDPYIRQTHQLYNFLRFCEMLIKKPCKIRTIHLLTSVDEGFGNAQQSSGLEEIKQSLRSHGVLLEINYSSSIHDREIRFNTGWMFKIGRGLDYFKRPQGRFSLGYCDLDLRPCHETTVDIFHNKHTKKI", "length": 249 }, "evidence": [ { "id": "F1STE3", "url": "https://omabrowser.org/oma/group/F1STE3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5I0J5-1", "protein_name": "MIT domain-containing protein 1", "gene_name": "Mitd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKSSLGQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRSTLRTKISGYMDRAENIKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLQETVTEVWIEDPYIRQTHQLYNFLRFCEMLIKKPCKVRTIHLLTSGDEGFGNTQQSSGLEEIKQSLRSHGVVLEINYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQGRFSLGYCDLDLRPCHETTVDIFHNKHTKKI", "length": 249 }, "evidence": [ { "id": "F1STE3", "url": "https://omabrowser.org/oma/group/F1STE3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8VDV8-1", "protein_name": "MIT domain-containing protein 1", "gene_name": "Mitd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKSSLGQDSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLHETVTEVWIEDPYIRQTHQLYNFLRFCEMLIKKPCKVRTIHLLTSGYEGLGNTQQSSGLEEIKQSLGSHGVVLEINYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQGRFSLGYYDLDLRPCHETTVDIFHNKHTKKI", "length": 249 }, "evidence": [ { "id": "F1STE3", "url": "https://omabrowser.org/oma/group/F1STE3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WV92-1", "protein_name": "MIT domain-containing protein 1", "gene_name": "MITD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKSGLRQDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIKKYLDQEKEDGKYHKQIKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQLYNFLRFCEMLIKRPCKVKTIHLLTSLDEGIEQVQQSRGLQEIEESLRSHGVLLEVQYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQSRFSLGYCDFDLRPCHETTVDIFHKKHTKNI", "length": 249 }, "evidence": [ { "id": "F1STE3", "url": "https://omabrowser.org/oma/group/F1STE3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VZK1-1", "protein_name": "MIT domain-containing protein", "gene_name": "Dmel\\CG14985", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKRKGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFGKYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEYKDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKIYLSNGYIIKIGRGLHFYKPANPMYSIGLVNYKFRKCLQTDVDIWRNSSAAS", "length": 241 }, "evidence": [ { "id": "F1STE3", "url": "https://omabrowser.org/oma/group/F1STE3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein domain specific binding", "id": "GO:0019904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019904", "evidence": [ { "database": "UniProtKB", "id": "F1STE3", "url": "https://www.uniprot.org/uniprotkb/F1STE3" } ], "pmid": "" }, { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F1STE3", "url": "https://www.uniprot.org/uniprotkb/F1STE3" } ], "pmid": "" }, { "name": "phosphatidylinositol binding", "id": "GO:0035091", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035091", "evidence": [ { "database": "UniProtKB", "id": "F1STE3", "url": "https://www.uniprot.org/uniprotkb/F1STE3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "late endosome membrane", "id": "GO:0031902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031902", "evidence": [ { "database": "UniProtKB", "id": "F1STE3", "url": "https://www.uniprot.org/uniprotkb/F1STE3" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "F1STE3", "url": "https://www.uniprot.org/uniprotkb/F1STE3" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "midbody abscission", "id": "GO:0061952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061952", "evidence": [ { "database": "UniProtKB", "id": "F1STE3", "url": "https://www.uniprot.org/uniprotkb/F1STE3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 97, "end_pos": 99, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1STE3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 249, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1STE3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1STE3" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1STE3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STE3" }, { "id": "SM00745", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00745" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MIT", "eco_id": "ECO_0000259", "start_pos": 8, "end_pos": 86, "start_aa": "Pro", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 97, "end_pos": 99 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1STF1-1", "uniprot_ac": "F1STF1", "uniprot_id": "F1STF1_PIG", "mass": { "chemical_mass": 132740.0, "monoisotopic_mass": 132740.0 }, "refseq": { "ac": "XP_020943850", "name": "AF4/FMR2 family member 3 isoform X6", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943850" }, "gene_names": [ { "name": "AFF3", "type": "recommended", "evidence": [ { "id": "F1STF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STF1" } ] }, { "name": "AFF3", "type": "synonym", "evidence": [ { "id": "XP_020943850", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943850" } ] } ], "protein_names": [ { "name": "AF4/FMR2 family member 3 isoform X6", "type": "synonym", "evidence": [ { "id": "XP_020943850", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943850" } ] }, { "name": "ALF transcription elongation factor 3", "type": "synonym", "evidence": [ { "id": "F1STF1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STF1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1STF1", "url": "https://www.uniprot.org/uniprotkb/F1STF1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AFF3", "url": "https://www.uniprot.org/uniprotkb/F1STF1", "locus": { "chromosome": "3", "start_pos": 54727885, "end_pos": 54135532, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000055832", "url": "https://www.ensembl.org/id/ENSSSCG00000055832" } ] } } ], "crossref": [ { "id": "F1STF1", "url": "https://alphafold.ebi.ac.uk/entry/F1STF1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008179", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008179", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100522606", "url": "https://www.ncbi.nlm.nih.gov/gene/100522606", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007797", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007797", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043639", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043639", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043640", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043640", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10528", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10528", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10528:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10528:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05110", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05110", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18875", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18875", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF18876", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF18876", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020943850", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020943850", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ABS3", "url": "https://www.uniprot.org/uniprotkb/A0A287ABS3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ABS3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ABS3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STF1", "url": "https://www.uniprot.org/uniprotkb/F1STF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STF1-1", "url": "https://www.uniprot.org/uniprotkb/F1STF1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDSFDIALLQEWDLESLCVYEPDRNVLRRKERERRNQETQQDDSTFNSSYSLFSEPYKTNKGDELSSRIQNTLGNYDEMKDFLTDRSNQSHLVGVPKPGVPQAPVNKIDEHFVADPRAQTQPASVGSTTSTPAAVPGQQSKRGAMGWQKAGHPPSDGQQRAAPQGSLRTLLGDGVGRQQPRTKQVCNVEVGLQTQDRPPAMTAKHSSGGHCVQNFPPSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSSTEASVHCTSYRGGPAAKPESARAKGKLSKFGIPKQGEESRSGETNSCVEEIIREMTWLPPLSGIQAPGKVEPSKFPFPNKDSQLVSSGHNNPKKGDAEPESPDNGTANTSMLEDDLKLSSDEEENEQQATQRTALHALSDSAGVQQANGRASAPSSKGSSSGSSSSSGSSSSSDSESSSGSDSETESSSSESEGSKPPHYSSPEAEPASSNKWQLDKWLNKVNPHKPPILIQNESHGPESNQYYPPVKDDTQDCGKLPEVCPSSLRDKDIKSACKEEQRPRTANKAPGSKGVKQKSPPAAVAVAVTAAPAAPPPAVPGAPAESAPPPARRSGGKKPTRRTERTSAGDGANGLRPEEPVAADALGASVAVPPEPTKPRPCGNGRTSHRKELRSAVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSSDSDLESEQEDYPLSKAQAVATAAPGNEQRLKEAANSIIGGGPRAPVGSINARTTSDIAKELEEQFYTLVPFGRNELLSPLKDSEEVRSLWVKIDLTLLSRIPEHLPQEPGVLSGPASKEAESAPPSHTADAPPEKALPKSKRKRKCDNEDDYREIKRAQGEKESSSRLTASGSSTLSANHCNMTINSLAIPINKNEKMLRSPISPLSDAAKHKYPGEDFTSSSRSNSSGLFPSNSSNKKHKAESQLQTHAGDLPKAAHGNSESVLHKSRPQTEPWSPGSNGHRDCKRQKLIFDDMPRSADYFMQEAKRMKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGASGKSTGTPSPMSPNPSPTSSVGSQGSLSNANALSPSTIVSIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSAHLA", "length": 1227, "header": "tr|F1STF1-1|F1STF1_PIG Isoform 1 of ALF transcription elongation factor 3 OS=Sus scrofa OX=9823 GN=AFF3 PE=3 SV=3 CANONICAL=F1STF1-1" }, "isoforms": [ { "isoform_ac": "A0A287ABS3-1", "url": "https://www.uniprot.org/uniprotkb/F1STF1/entry#A0A287ABS3-1", "sequence": { "sequence": 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"length": 1252, "header": "tr|A0A287ABS3-1|A0A287ABS3_PIG Computationally mapped isoform of ALF transcription elongation factor 3 OS=Sus scrofa OX=9823 GN=AFF3 PE=3 SV=2 CANONICAL=F1STF1-1" }, "locus": { "chromosome": "3", "start_pos": 54726433, "end_pos": 54173255, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064001.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064001.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041334.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041334.2" } ] } }, { "isoform_ac": "F1STF1-1", "url": "https://www.uniprot.org/uniprotkb/F1STF1/entry#F1STF1-1", "sequence": { "sequence": 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"UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STG4-1", "url": "https://www.uniprot.org/uniprotkb/F1STG4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEGVLASPSGSGPSLHCGIIQWLVDNFCICEGYSVPRCLLYEIYMETCGHSAPNQVNPATFGKLVHLVFPDLASRRLGTRGSARYHYDGICMKKSSLFYAQYCYLLGGKRFHSGEVVAFESSTNYDSVLQEDGACDSHSLVKTDLVGLPLSGFRRCPFWEQELAKKYSYRSMAFLADEYCSYCQGVLQNVEGLLMSFWKSLQQDTVMLMSLPDVCQLLKCYDVQLYRGIEDILLHDFLEDVSIQYLKSVRLFSKKFKLWLLTALEGFPGLLQISKHKEVTVFVKRLRRKTYLSNMAKTMRTVLKSSRRVSVLKSDLDAIIHRGTLGISKKALPRDLSSADDLEEDAEMKCLSSLISLLGMSTDLSVFLNCLSSNLQVFVFQPSRSKEEFIRLAASFQLRWNFLLTAVSRAMTLCHRDSFGSWHLFHLLLLEYVIHILQSCIEEDEEDEDDVGNLQEELPEYQWPVQPDQGLTHPPESSPAQEHDSPSEEPLRVTLRPGSQSCCAVVRVPGFLVDTATGNKLIQVLLEDKATESTIKLSLPLGQETLITLKDGQKFVIHISDVSQSSENIYFRESNADM", "length": 579, "header": "tr|F1STG4-1|F1STG4_PIG Isoform 1 of DNA-binding protein RFX8 OS=Sus scrofa OX=9823 GN=RFX8 PE=4 SV=4 CANONICAL=F1STG4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RA28-1", "url": "https://www.uniprot.org/uniprotkb/F1STG4/entry#A0A5G2RA28-1", "sequence": { "sequence": "MAEGVLASPSGSGPSLHCGIIQWLVDNFCICEGYSVPRCLLYEIYMETCGHSAPNQVNPATFGKCDSHSLVKTDLVGLPLSGFRRCPFWEQELAKKYSYRSMAFLADEYCSYCQGVLQNVEGLLMSFWKSLQQDTVMLMSLPDVCQLLKCYDVQLYRGIEDILLHDFLEDVSIQYLKSVRLFSKKFKLWLLTALEGFPGLLQISKHKEVTVFVKRLRRKTYLSNMAKTMRTVLKSSRRVSVLKSDLDAIIHRGTLGISKKALPRDLSSADDLEEDAEMKCLSSLISLLGMSTDLSVFLNCLSSNLQVFVFQPSRSKEEFIRLAASFQLRWNFLLTAVSRAMTLCHRDSFGSWHLFHLLLLEYVIHILQSCIEEDEEDEDDVGNLQEELPEYQWPVQPDQGLTHPPESSPAQEHDSPSEEPLRVTLRPGSQSCCAVVRVPGFLVDTATGNKLIQVLLEDKATESTIKLSLPLGQETLITLKDGQKFVIHISDVSQSSENIYFRESNADM", "length": 508, "header": "tr|A0A5G2RA28-1|A0A5G2RA28_PIG Computationally mapped isoform of Regulatory factor X8 OS=Sus scrofa OX=9823 GN=RFX8 PE=4 SV=1 CANONICAL=F1STG4-1" }, "locus": { "chromosome": "3", "start_pos": 52909037, "end_pos": 52841215, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078339.2", "url": "https://www.ensembl.org/id/ENSSSCT00000078339.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067466.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067466.1" } ] } }, { "isoform_ac": "F1STG4-1", "url": "https://www.uniprot.org/uniprotkb/F1STG4/entry#F1STG4-1", "sequence": { "sequence": "MAEGVLASPSGSGPSLHCGIIQWLVDNFCICEGYSVPRCLLYEIYMETCGHSAPNQVNPATFGKLVHLVFPDLASRRLGTRGSARYHYDGICMKKSSLFYAQYCYLLGGKRFHSGEVVAFESSTNYDSVLQEDGACDSHSLVKTDLVGLPLSGFRRCPFWEQELAKKYSYRSMAFLADEYCSYCQGVLQNVEGLLMSFWKSLQQDTVMLMSLPDVCQLLKCYDVQLYRGIEDILLHDFLEDVSIQYLKSVRLFSKKFKLWLLTALEGFPGLLQISKHKEVTVFVKRLRRKTYLSNMAKTMRTVLKSSRRVSVLKSDLDAIIHRGTLGISKKALPRDLSSADDLEEDAEMKCLSSLISLLGMSTDLSVFLNCLSSNLQVFVFQPSRSKEEFIRLAASFQLRWNFLLTAVSRAMTLCHRDSFGSWHLFHLLLLEYVIHILQSCIEEDEEDEDDVGNLQEELPEYQWPVQPDQGLTHPPESSPAQEHDSPSEEPLRVTLRPGSQSCCAVVRVPGFLVDTATGNKLIQVLLEDKATESTIKLSLPLGQETLITLKDGQKFVIHISDVSQSSENIYFRESNADM", "length": 579, "header": "tr|F1STG4-1|F1STG4_PIG Isoform 1 of DNA-binding protein RFX8 OS=Sus scrofa OX=9823 GN=RFX8 PE=4 SV=4 CANONICAL=F1STG4-1" }, "locus": { "chromosome": "3", "start_pos": 52909037, "end_pos": 52841215, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008942.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008942.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008716.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008716.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F1STG4", "url": "https://www.uniprot.org/uniprotkb/F1STG4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1STG4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 579, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1STG4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1STG4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1STG4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STG4" }, { "id": "PS51526", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51526" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RFX-type winged-helix", "eco_id": "ECO_0000259", "start_pos": 20, "end_pos": 95, "start_aa": "Ile", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 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"field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1STJ8-1", "uniprot_ac": "F1STJ8", "uniprot_id": "F1STJ8_PIG", "mass": { "chemical_mass": 27236.0, "monoisotopic_mass": 27236.0 }, "refseq": { "ac": 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"database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100516989", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516989", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NRYVKPD", "url": "https://omabrowser.org/oma/group/NRYVKPD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1STJ8", "url": "https://www.orthodb.org/?gene=F1STJ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198:SF165", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198:SF165", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": 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"tr|F1STJ8-1|F1STJ8_PIG Isoform 1 of Ankyrin repeat domain-containing protein 49 OS=Sus scrofa OX=9823 GN=ANKRD49 PE=4 SV=1 CANONICAL=F1STJ8-1" }, "isoforms": [ { "isoform_ac": "F1STJ8-1", "url": "https://www.uniprot.org/uniprotkb/F1STJ8/entry#F1STJ8-1", "sequence": { "sequence": "MEKEKVNDDGKPDPEDSLDFSEHFNQLELLETHGHLIPTGTQSLWVGNSDEDEEQDEKTEEWYQLQEKKMEQDPSKLLLWAAEKNRLSTVRRLLSEKATHVNTRDEDEYTPLHRAAYSGHLDVVRELIANGADVHAVTVDGWTPLHSACKWNNTRVASFLLQHDADINAQTKGLLTPLHLAAGNRDSKDTLELLLMNRYIKPGLKNNLEETAFDIARRTSIHHYLFEIVEGCTNSSPQS", "length": 239, "header": "tr|F1STJ8-1|F1STJ8_PIG Isoform 1 of Ankyrin repeat domain-containing protein 49 OS=Sus scrofa OX=9823 GN=ANKRD49 PE=4 SV=1 CANONICAL=F1STJ8-1" }, "locus": { "chromosome": "9", "start_pos": 26641488, "end_pos": 26638946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016317.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016317.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015880.2", "url": "https://www.ensembl.org/id/ENSSSCP00000015880.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1STJ8", "url": "https://www.uniprot.org/uniprotkb/F1STJ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516989", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516989", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NYL1-1", "protein_name": "Ankyrin repeat domain 49", "gene_name": "ANKRD49", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSKGKRAAEKEADERDDDSDEFAEFTESFNQLELLETHRHLIPIGTQSCWSGQSDDEDDEQERSEEWYEMQEKKMEKNPEKLLLWAAENNRLTTVRRLLSEKLAPVNARDEDQYTPLHRASYSGHLDMARELVAQGADIHAQTVDGWTPLHSACKWNNTKVAAFLLQQGADINAQTNGLLTPLHIAAGNKNSRETLELLLMNRYIKADLKNNLDETAFDIARRTDIYHYLFEIVEDCINAVSP", "length": 243 }, "evidence": [ { "id": "F1STJ8", "url": "https://omabrowser.org/oma/group/F1STJ8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F1RCG8-1", "protein_name": "Ankyrin repeat domain-containing protein 49", "gene_name": "ankrd49", "tax_id": 7955, "organism": "Danio rerio", "sequence": 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} ], "protein_names": [ { "name": "Thymocyte selection associated family member 2", "type": "synonym", "evidence": [ { "id": "F1STM8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STM8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1STM8", "url": "https://www.uniprot.org/uniprotkb/F1STM8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "THEMIS2", "url": "https://www.uniprot.org/uniprotkb/F1STM8", "locus": { "chromosome": "6", "start_pos": 85027902, "end_pos": 85011035, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003584", "url": "https://www.ensembl.org/id/ENSSSCG00000003584" } ] } } ], "crossref": [ { "id": "F1STM8", "url": "https://alphafold.ebi.ac.uk/entry/F1STM8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003584", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003584", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR025946", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025946", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039671", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039671", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15215", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15215", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15215:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15215:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12736", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12736", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1STM8", "url": "https://www.uniprot.org/uniprotkb/F1STM8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STM8-1", "url": "https://www.uniprot.org/uniprotkb/F1STM8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKVTHIGLQKVVCKDPETGQTMELAPDFQGLFSPITSPRSYGTLEELVSAATQHSRKLPICFMSTHRITTEARMVTEAQPLKLEAVEMHHGTYYARCVLGTGVQQAFLRLPLSQKGCFWELKLGDPQTLLQVLQDPALRDGPLTCPVLPWHFLTLRPEYEVEAIMHLRRTVVKIPSTLEVDVEDVTASSQHIHFIQPMLLSEALARGGPFPLSTEILEVPEGPCPFLSPWVGCLQKGQKLCIQGLASPPWRFLASTKGRKVPRHFMISGAYQGKLRRRPREFPTTFDLLGALQPGRPLRVAVTKDCEVDGLETPGFTSLAMGDRLEVLGTGQALGAQERDIEVLVCQRLSDQTGEEEEEDGESEDQEQILLPLYFPGSFVEELRDGRRYSLQDLTAQFSLPCEVKVVAKDTSLPVDPLPSFPGLRLEEKIMEPFFVVSLDSNPEMCFEISPRWLDLTVVEAKGRPSQPARPLPVATVEELTEAFYYRLRKLSAFESQTPPPRPPKSKSLDGQKKPGRKVKDAQSFQVLEWQEPALLPKPKTKTLPMVRKDRSKLYNEVSGHKKGPRPTQPIRQDTDDGHDYEEILEKFPKTL", "length": 592, "header": "tr|F1STM8-1|F1STM8_PIG Isoform 1 of Thymocyte selection associated family member 2 OS=Sus scrofa OX=9823 GN=THEMIS2 PE=3 SV=4 CANONICAL=F1STM8-1" }, "isoforms": [ { "isoform_ac": "F1STM8-1", "url": "https://www.uniprot.org/uniprotkb/F1STM8/entry#F1STM8-1", "sequence": { "sequence": "MKVTHIGLQKVVCKDPETGQTMELAPDFQGLFSPITSPRSYGTLEELVSAATQHSRKLPICFMSTHRITTEARMVTEAQPLKLEAVEMHHGTYYARCVLGTGVQQAFLRLPLSQKGCFWELKLGDPQTLLQVLQDPALRDGPLTCPVLPWHFLTLRPEYEVEAIMHLRRTVVKIPSTLEVDVEDVTASSQHIHFIQPMLLSEALARGGPFPLSTEILEVPEGPCPFLSPWVGCLQKGQKLCIQGLASPPWRFLASTKGRKVPRHFMISGAYQGKLRRRPREFPTTFDLLGALQPGRPLRVAVTKDCEVDGLETPGFTSLAMGDRLEVLGTGQALGAQERDIEVLVCQRLSDQTGEEEEEDGESEDQEQILLPLYFPGSFVEELRDGRRYSLQDLTAQFSLPCEVKVVAKDTSLPVDPLPSFPGLRLEEKIMEPFFVVSLDSNPEMCFEISPRWLDLTVVEAKGRPSQPARPLPVATVEELTEAFYYRLRKLSAFESQTPPPRPPKSKSLDGQKKPGRKVKDAQSFQVLEWQEPALLPKPKTKTLPMVRKDRSKLYNEVSGHKKGPRPTQPIRQDTDDGHDYEEILEKFPKTL", "length": 592, "header": "tr|F1STM8-1|F1STM8_PIG Isoform 1 of Thymocyte selection associated family member 2 OS=Sus scrofa OX=9823 GN=THEMIS2 PE=3 SV=4 CANONICAL=F1STM8-1" }, "locus": { "chromosome": "6", "start_pos": 85027295, "end_pos": 85013927, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003979.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003979.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003888.4", "url": "https://www.ensembl.org/id/ENSSSCP00000003888.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 568, "start_aa": "Thr", "end_pos": 568, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr568", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], 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"https://www.ebi.ac.uk/interpro/entry/IPR008496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738723", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738723", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GKMKQFH", "url": "https://omabrowser.org/oma/group/GKMKQFH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1STQ2", "url": "https://www.orthodb.org/?gene=F1STQ2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR20921", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20921", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20921:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20921:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05608", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05608", "database": "Pfam", 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{ "sequence": "MAEAEGSSPLLLPPPPPPPPGMAEVEAPTAADTDKKQFSCASGGAMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAKYWKLDPAQVYASGPNAWDTAVHDASEEYKHRMHSLCCDNCHSHVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSIGAFVKTWLPFVLLLGIILTVSLVFNLR", "length": 209, "header": "tr|F1STQ2-1|F1STQ2_PIG Isoform 1 of Transmembrane protein 222 OS=Sus scrofa OX=9823 GN=TMEM222 PE=1 SV=1 CANONICAL=F1STQ2-1" }, "isoforms": [ { "isoform_ac": "A0A287AEV1-1", "url": "https://www.uniprot.org/uniprotkb/F1STQ2/entry#A0A287AEV1-1", "sequence": { "sequence": "MAEAEGSSPLLLPPPPPPPPGMAEVEAPTAADTDKKQFSCASGGAMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAKMFSSPSLPGTSCGLDSGVTPTEYWKLDPAQVYASGPNAWDTAVHDASEEYKHRMHSLCCDNCHSHVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSIGAFVKTWLPFVLLLGIILTVSLVFNLR", "length": 231, "header": "tr|A0A287AEV1-1|A0A287AEV1_PIG Computationally mapped isoform of Transmembrane protein 222 OS=Sus scrofa OX=9823 GN=TMEM222 PE=1 SV=2 CANONICAL=F1STQ2-1" }, "locus": { "chromosome": "6", "start_pos": 84558458, "end_pos": 84546946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000060156.3", "url": "https://www.ensembl.org/id/ENSSSCT00000060156.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042517.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042517.2" } ] } }, { "isoform_ac": "A0A8W4FKW5-1", "url": "https://www.uniprot.org/uniprotkb/F1STQ2/entry#A0A8W4FKW5-1", "sequence": { "sequence": "MAEAEGSSPLLLPPPPPPPPGMAEVEAPTAADTDKKQFSCASGGAMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSVSPHSGLLWRVPRMFSSPSLPGTSCGLDSGVTPTEYWKLDPAQVYASGPNAWDTAVHDASEEYKHRMHSLCCDNCHSHVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSIGAFVKTWLPFVLLLGIILTVSLVFNLR", "length": 233, "header": "tr|A0A8W4FKW5-1|A0A8W4FKW5_PIG Computationally mapped isoform of Transmembrane protein 222 OS=Sus scrofa OX=9823 GN=TMEM222 PE=4 SV=1 CANONICAL=F1STQ2-1" }, "locus": { "chromosome": "6", "start_pos": 84558458, "end_pos": 84546946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102610.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102610.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078941.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078941.1" } ] } }, { "isoform_ac": "F1STQ2-1", "url": "https://www.uniprot.org/uniprotkb/F1STQ2/entry#F1STQ2-1", "sequence": { "sequence": "MAEAEGSSPLLLPPPPPPPPGMAEVEAPTAADTDKKQFSCASGGAMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAKYWKLDPAQVYASGPNAWDTAVHDASEEYKHRMHSLCCDNCHSHVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSIGAFVKTWLPFVLLLGIILTVSLVFNLR", "length": 209, "header": "tr|F1STQ2-1|F1STQ2_PIG Isoform 1 of Transmembrane protein 222 OS=Sus scrofa OX=9823 GN=TMEM222 PE=1 SV=1 CANONICAL=F1STQ2-1" }, "locus": { "chromosome": "6", "start_pos": 84558458, "end_pos": 84546946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031592.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031592.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027298.1", "url": "https://www.ensembl.org/id/ENSSSCP00000027298.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 29, "start_aa": "Thr", "end_pos": 29, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr29", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1STQ2", "url": "https://www.uniprot.org/uniprotkb/F1STQ2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738723", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738723", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F4ITL6-1", "protein_name": "Protein REVERSION-TO-ETHYLENE SENSITIVITY1", "gene_name": "RTE1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSRGRGVPMMDLKRSYDVEDRVVSVSIPSIIEADEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKHTDFGTARTWDNALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCYGGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVGWPFLIGLSSFSLLLFAWFIIATYCFKNIIT", "length": 250 }, "evidence": [ { "id": "F1STQ2", "url": "https://omabrowser.org/oma/group/F1STQ2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8BVA2-1", "protein_name": "Transmembrane protein 222", "gene_name": "Tmem222", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAEAEGSSPLLLQPPPPPPRMAEVETPTGAETDMKQYHGSGGVVMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAKFWKLDPGQVYASGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTVSLVFNLR", "length": 208 }, "evidence": [ { "id": "F1STQ2", "url": "https://omabrowser.org/oma/group/F1STQ2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IPG2-1", "protein_name": "Transmembrane protein 222", "gene_name": "Dmel\\CG8372", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSTNPSPQRQQSEDVQISMASSGGGAGNGVPDRLPPINVKDQRFPYCIVWTPIPVLTWLMPMIGHMGICTSSGVIRDFAGPYFVSEDNMAFGRPTRYIRLHPKHMVGGSYAWDEAVSKASVLYGTRIHNIFCDNCHSHVATALIYMRYYDSTAWNMIILSMWLFVCGRYVGIGGFIKTWLPFAILLSIFTILGIYF", "length": 196 }, "evidence": [ { "id": "F1STQ2", "url": "https://omabrowser.org/oma/group/F1STQ2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9H0R3-1", "protein_name": "Transmembrane protein 222", "gene_name": "TMEM222", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEAEGSSLLLLPPPPPPPRMAEVEAPTAAETDMKQYQGSGGVAMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAKYWKLDPAQVYASGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTVSLVFNLR", "length": 208 }, "evidence": [ { "id": "F1STQ2", "url": "https://omabrowser.org/oma/group/F1STQ2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "F1STQ2", "url": "https://www.uniprot.org/uniprotkb/F1STQ2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 159, "end_pos": 161, "annotation": "n_glycosylation_sequon" }, { "start_pos": 160, "end_pos": 162, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 29 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 159, "end_pos": 161 }, { "start_pos": 160, "end_pos": 162 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], 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improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1STU7", "url": "https://www.uniprot.org/uniprotkb/F1STU7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518207", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518207", "resource": "KEGG Pathway" } ], 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"MAVQAALLSTHPFVPFGFGGSPDGLGGAFGALDKGCCFEDEETGTPAGALLAGAEGGDVREATRDLLSFIDSASSNIKLALDKPGKSKRKVNHRKYLQKQIKRCSGLMGAAPPCPPSPGATDTPAKRPLAAAGAQTVAVATHGKAAPRREASQAAAAASLQSRSLAALFDSLRHVPGGAESAGAAVAATAGGLGGAGAGGSGGDAAGTAGCPVVPGARKVPLRARNLPPSFFTEPSRAVSGGCGPSGPGVSLGDLEKGAEAVEFFELLGPDYCQGTEAGVLLAAEPLDVFPTGAAVVRGSPELEPGLFEPPPAMVGSLLYPEPWSAPGCPAPKKPPLAAPRGGLTLNEPLRPLYPAAPDSPGGEDGPGLLASFAPFFSDCALPPPPPQQVSYEYSAGYSRSAYSSLWRPDGVWEGAPGEEEAPRD", "length": 425, "header": "tr|F1STW2-1|F1STW2_PIG Isoform 1 of Family with sequence similarity 181 member B OS=Sus scrofa OX=9823 GN=FAM181B PE=4 SV=2 CANONICAL=F1STW2-1" }, "isoforms": [ { "isoform_ac": "F1STW2-1", "url": "https://www.uniprot.org/uniprotkb/F1STW2/entry#F1STW2-1", "sequence": { "sequence": 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"phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1STW2", "url": "https://www.uniprot.org/uniprotkb/F1STW2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100517667", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100517667", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y254-1", "protein_name": "Family with sequence similarity 181 member B", "gene_name": "FAM181B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAVPAALLSPHHLLSFCFPAGGLLGYADLEKGYEGGGGVGGGGGGGGCEAGDFKEATRDLLSFIDSASSNIKLALDKPVKSKRKVNHRKYLQKQIKRCTGIIAPPPAAPPPSACPKPPPPPRREGSQAGSSLQSRSLAALFGSLQPGRGSAGSDGGGAAGGGPRKVPLRDRNLPPSFFTEPGAKETEKGGGPEAAEFFELLGPEYGALLPEHAAPPQDAFPAGRPPAELGLEHGLYEAAPLPAAPHPLLGGLLYPEPPWSPPGPCSPAKKAPPEALRPLYPEPAAGGDAFGPFFPECPLPPPQMPYDYGGGFHRAAYTGL", "length": 320 }, "evidence": [ { "id": "F1STW2", "url": "https://omabrowser.org/oma/group/F1STW2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6NEQ2-1", "protein_name": "Protein FAM181B", "gene_name": "FAM181B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"CDD", "categories": [ "Protein Classification" ] }, { "id": "100515781", "url": "https://www.ncbi.nlm.nih.gov/gene/100515781", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000980", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000980", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036860", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036860", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "QDCGPEG", "url": "https://omabrowser.org/oma/group/QDCGPEG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR15832", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15832", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15832:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15832:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_013854500", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013854500", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SU08", "url": "https://www.uniprot.org/uniprotkb/F1SU08", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU08-1", "url": "https://www.uniprot.org/uniprotkb/F1SU08-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQKAGAGGRRASDCGPAPHRPRCITKFAQYVGSFPVDDLDTQERVWLVQQQLWALKDCPRRRAVILKFSLQGLKIYSGEGEVLLMAHALRRILYTTWCPADCQFAFMARNPRSPASKLFCHLFVGSQPGEVQILHLLLCRSFQLAYLLQHPEERAQPEPCLGPAGDVALKPLSCPGGPSGLVREPFGRDQLSQNVNALVSFRRLPAEGPGGSGKELPESESRGGARHTRLGNPYCSPTLVRKKAIRSKVIRSGAYRACTYETQLQLSAREAFPALWEAWPRGPGSPSCLVESEGSLTENIWAFAGISRPSALALLRRDVLGAFLLWPEPGANGQWCLSVRTQCGVVPHQVFRNHLGRYCVEHLPAEFPSLEALVEHHAGTERSLFCSLDMGRLNPN", "length": 396, "header": "tr|F1SU08-1|F1SU08_PIG Isoform 1 of SH2 domain-containing protein 5 OS=Sus scrofa OX=9823 GN=SH2D5 PE=4 SV=5 CANONICAL=F1SU08-1" }, "isoforms": [ { "isoform_ac": "F1SU08-1", "url": "https://www.uniprot.org/uniprotkb/F1SU08/entry#F1SU08-1", "sequence": { "sequence": "MQKAGAGGRRASDCGPAPHRPRCITKFAQYVGSFPVDDLDTQERVWLVQQQLWALKDCPRRRAVILKFSLQGLKIYSGEGEVLLMAHALRRILYTTWCPADCQFAFMARNPRSPASKLFCHLFVGSQPGEVQILHLLLCRSFQLAYLLQHPEERAQPEPCLGPAGDVALKPLSCPGGPSGLVREPFGRDQLSQNVNALVSFRRLPAEGPGGSGKELPESESRGGARHTRLGNPYCSPTLVRKKAIRSKVIRSGAYRACTYETQLQLSAREAFPALWEAWPRGPGSPSCLVESEGSLTENIWAFAGISRPSALALLRRDVLGAFLLWPEPGANGQWCLSVRTQCGVVPHQVFRNHLGRYCVEHLPAEFPSLEALVEHHAGTERSLFCSLDMGRLNPN", "length": 396, "header": "tr|F1SU08-1|F1SU08_PIG Isoform 1 of SH2 domain-containing protein 5 OS=Sus scrofa OX=9823 GN=SH2D5 PE=4 SV=5 CANONICAL=F1SU08-1" }, "locus": { "chromosome": "6", "start_pos": 78963083, "end_pos": 78956618, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003899.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003899.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003809.5", "url": "https://www.ensembl.org/id/ENSSSCP00000003809.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU08", "url": "https://www.uniprot.org/uniprotkb/F1SU08" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A096MJ64-1", "protein_name": "SH2 domain-containing protein 5", "gene_name": "Sh2d5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRAGAGARRASDCGPAPYRPRCIAKFAQYVGSFPVDDLDTQESVCLVQQHLWALQDCSRRRAVILKFSLQGLKIYSGEGEVLLMAHALKRILYATWNPAACQFAFVARNPRSPASKLFCHLFVGSQPGEINILYLLLCRSFQLAYLLQHPEERAQPEPSLVPGGDMSLKPLCSPGVAPALVREPFSRDQLSQNVHALVSFRRLPAEGLLGSNGKELPEPEGRGGTRHIRLGNPYCSPTLVRKKAIRSKVIRSGAYRGCTYETQLQLSAREAFPAAWEAWPRGPGSPSCLVENEGSLTENIWAFAGLSRSCALALLRRDVHGAFLLWPEPGTSGQWSLSVRTQCGVVSHQVFRNHLGRYCLEHLPAEFPSLEALVESHAGMERSLFCPLSMGRLNPTYEEQDSGPEGRFPRTLRPLSHAKSEAELQGLG", "length": 429 }, "evidence": [ { "id": "F1SU08", "url": "https://omabrowser.org/oma/group/F1SU08/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3L7I8M5-1", "protein_name": "SH2 domain-containing protein 5", "gene_name": "Sh2d5", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MQRAGAGARRASDCGPAPYRPRCIAKFAQYVGSFPVEDLDTQEGVYLVQQQLWALQDCSRRRAVILKFSLQGLKVYSGEGEVLLMAHALKRILYATWCPAACQFAFVARNPRSPASKLYCHLFVGSQPGEVHILYLLLCRSFQLAYLLQHPEERAQPEPCLGPMGDMSPKPLCSPGTPPVLVREPFSRDQLSQNVHALVSFRRVPAEGLLGGSGKELPEPEGRGGPRHTRLGNPYCSPTLVRKKAIRSKVIRSGAYRGCTYETQLQLSAREAFPAAWEAWPRSPGGPSCLVENEGSLTENIWAFAGLSKPCALALLRRDVHGAFLLWPEPGTSDQWSLSVRTQCGVVPHQVFRNHLGRYCLEHLPAEFPSLEALVESHAGMERSLFCPLSMGRLNPTYEEQDCGPEGRLPRTLRPLSHAKSEAELQGLG", "length": 429 }, "evidence": [ { "id": "F1SU08", "url": "https://omabrowser.org/oma/group/F1SU08/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V0ZNL1-1", "protein_name": "SH2 domain containing 5", "gene_name": "SH2D5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKKKMTANGRGPDPAPPPPRARGIAKSAEYVGSFMVEELELQQHVGQLEEQLRALKDCPRRRSVVLRFSLQGLKVYGDDGETLLMAHALRRILYSTCLHAERQFAFVARNPHSPPSTLFCHLFVSPVGEVHVLHLLLCRSFQLCYLQAHPELQAAEPDPPVLLRETLNPEEVSRNVNALLSLRRLPALGPLGAGHVFAQHLLQERRVEAEGRAVGWRPGNPYCSPVLVRKKAIRSKVLRSGAYRDCGAESQLQQREGGIGFGALKEDPGGQERDLGPDTHPPPSAPSGWESRGMRGLVLLPDTEAALAESVWAFAGIARASGIALLRGDVPGAFLLRPEPGATPRWCLWVHTPCGVVPYCVLRTQQGRFCVEHSHAEFRSMPALLAHYSAVPGGCFCRLSVGRCNPGYEQRDEDGPALVQHERG", "length": 424 }, "evidence": [ { "id": "F1SU08", "url": "https://omabrowser.org/oma/group/F1SU08/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E1BA40-1", "protein_name": "SH2 domain-containing protein 5", "gene_name": "SH2D5", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQKAGAGGRRASDCGPAPQRPRCITKFAQYVGSFPVDDLDPQESVWLVQQQLWALKDCPRRRAVILKFSLQGLKIYSGEGEVLLMAHALRRILYATWCPADCQFAFMARNPRSPASKLFCHLFVGSQPGEVQILHLLLCRSFQLAYLLQHPEERARPEPCPEPVGDAPLKPVPGPGGPPGLVREPFGRDQLSQNVNALVSFRRLPAEGSGGSGKELLESASRGGTRHLRLGNPYCSPTLVRKKAIRSKVLRSGAYRACTYETQLQLSAREALPAAWEAWPRGPGGPSCLVESEGSLTENIWAFAGISRTSALALLRRDVLGAFLLWPEPGANGQWCLSVRTQCGVVPHQVFRNHVGRYCVEHLPAEFPSLEALVEHHAGTERSLFCSLDMGRLNPGYEEQDCGPSGQPPRTLRPLGHAKSEAELQGLG", "length": 428 }, "evidence": [ { "id": "F1SU08", "url": "https://omabrowser.org/oma/group/F1SU08/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F1Q5B0-1", "protein_name": "SH2 domain-containing protein 5 isoform 1", "gene_name": "sh2d5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MFKRQTPQPGSVWNMGETAGREHGTVTRSAEYIGSFPVDDSCLDDQIQQLHTQLKSLKNCKSKRTVSLRFSVKGVKVYDEDETTLLMAHAMCRVSLSTARPSDAQFAFASHNPGNSDAQLYCHLFRARHARAAQFLNLLLCRCFQLYFLEKHPEEAQEECSGKKPSRAPSLLNQGFPLSVSALVSFRRAPTQGLLPGAKLFSQQSTEQVSSPEEGPTSSPTIVRKMAIRTKELRSGAYRSFTFTPLKQRHLQDKLSAPQEKEQATAKACMSRAPSLAETEEALAQAVWCWAGVSSDCSSSLLADDVLGAFLLCPHPKKPNRGSLIVRFSSGLVTYAIKNSKGKFRLEKCHTDFESLAALMEHYTEFGDELECSLSCARVNHCYDWEEMVNKGSRLLQDNKKGTFKCRSWV", "length": 410 }, "evidence": [ { "id": "F1SU08", "url": "https://omabrowser.org/oma/group/F1SU08/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6ZV89-1", "protein_name": "SH2 domain-containing protein 5", "gene_name": "SH2D5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQKAGAGGRRASDCGLAPHRPRCITKFAQYVGSFPVDDLDTQESVWLVQQQLWALKDCPRRRAVILKFSLQGLKIYSGEGEVLLMAHALRRILYSTWCPADCQFAFMARNPRSPASKLFCHLFVGSQPGEVQILHLLLCRSFQLAYLLQHPEERAQPEPCPGPTGEVPLKPLSSSGGLVREPFGRDQLSQNVHALVSFRRLPAEGLVGSGKELPESEGRARHARLGNPYCSPTLVRKKAIRSKVIRSGAYRGCTYETQLQLSAREAFPAAWEAWPRGPGGHSCLVESEGSLTENIWAFAGISRPCALALLRRDVLGAFLLWPELGASGQWCLSVRTQCGVVPHQVFRNHLGRYCLEHLPAEFPSLEALVENHAVTERSLFCPLDMGRLNPTYEEQDCGPPGRPPRTLRPLSHAKSEAELQGLG", "length": 423 }, "evidence": [ { "id": "F1SU08", "url": "https://omabrowser.org/oma/group/F1SU08/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8JZW5-1", "protein_name": "SH2 domain-containing protein 5", "gene_name": "Sh2d5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQRAGAGARRASDCGPAPYRPRCIAKLAQYVGSFPVDDLDTQESVGLVQQQLWALQDCSRRRAVILKFSLQGLKIYSGEGEVLLMAHALKRILYATWYPAACQFAFIARNPRSPSSKLFCHLFVGSQPGEVHILYLLLCRSFQLAYLLQHPEERAQSEPCLAPVGDLSLKPLCSPGVPPALVREPFSRDQLSQNVHALVSFRRLPAEGLLGSNGKELPESEGRGGTRHIRLGNPYCSPTLVRKKAIRSKVIRSGAYRGCTYETQLQLSAREAFPAAWEAWPRGPGGPSCLVENEGSLTENIWAFAGLSRSCALSLLRRDVHGAFLLWPEPGTSDQWSLSVRTQCGVVPHQVFRNHLGRFCLEHLPAEFPSLEALVESHAGVERSLFCPLSMGRLNPTYEEQDCGTEGRFPRTLRPLSHAKSEAELQGLG", "length": 429 }, "evidence": [ { "id": "F1SU08", "url": "https://omabrowser.org/oma/group/F1SU08/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "F1SU08", "url": "https://www.uniprot.org/uniprotkb/F1SU08" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SU08-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 396, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SU08-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SU08" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SU08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU08" }, { "id": "PS01179", "database": "PROSITE", "url": "https://prosite.expasy.org/PS01179" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PID", "eco_id": "ECO_0000259", "start_pos": 28, "end_pos": 146, "start_aa": "Ala", "end_aa": "Tyr", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SU08", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU08" }, { "id": "PS50001", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50001" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "SH2", "eco_id": "ECO_0000259", "start_pos": 301, "end_pos": 396, "start_aa": "Trp", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU33-1", "uniprot_ac": "F1SU33", "uniprot_id": "F1SU33_PIG", "mass": { "chemical_mass": 43608.0, "monoisotopic_mass": 43608.0 }, "refseq": { "ac": "XP_003124892", "name": "stAR-related lipid transfer protein 7, mitochondrial", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124892" }, "gene_names": [ { "name": "STARD7", "type": "recommended", "evidence": [ { "id": "F1SU33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU33" } ] }, { "name": "STARD7", "type": "synonym", "evidence": [ { "id": "XP_003124892", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124892" } ] } ], "protein_names": [ { "name": "StAR-related lipid transfer protein 7, mitochondrial", "type": "recommended", "evidence": [ { "id": "F1SU33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU33/entry#names_and_taxonomy" } ] }, { "name": "START domain-containing protein 7", "type": "synonym", "evidence": [ { "id": "F1SU33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU33/entry#names_and_taxonomy" } ] }, { "name": "stAR-related lipid transfer protein 7, mitochondrial", "type": "synonym", "evidence": [ { "id": "XP_003124892", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124892" } ] } ], "function": [ { "annotation": "May play a protective role in mucosal tissues by preventing exaggerated allergic responses.", "evidence": [ { "database": "UniProtKB", "id": "F1SU33", "url": "https://www.uniprot.org/uniprotkb/F1SU33#function" }, { "database": "UniProtKB", "id": "ARBA00053168", "url": "https://www.uniprot.org/uniprotkb/ARBA00053168#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU33", "url": "https://www.uniprot.org/uniprotkb/F1SU33" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "STARD7", "url": "https://www.uniprot.org/uniprotkb/F1SU33", "locus": { "chromosome": "3", "start_pos": 47019206, "end_pos": 46992777, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008132", "url": "https://www.ensembl.org/id/ENSSSCG00000008132" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008132", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008132", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08911", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08911", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100525865", "url": "https://www.ncbi.nlm.nih.gov/gene/100525865", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002913", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002913", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR023393", "url": "https://www.ebi.ac.uk/interpro/entry/IPR023393", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041949", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041949", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051213", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051213", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525865", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525865", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NQLCERC", "url": "https://omabrowser.org/oma/group/NQLCERC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SU33", "url": "https://www.orthodb.org/?gene=F1SU33", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19308", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19308", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19308:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19308:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01852", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01852", 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"MFPRRPPASLAAWLVGAAAAGRAGARGGGLLSLLANQCSFVTGLRVRRAQQIAQLYGRLYSESSRRVLLGRLWRRLRGRPGHASALMAALAGVFVWDEERIQEEELQRSIDEMKRLEEMSMFQTSGVERPPPEPKSQTEGNEDSGGKEQPWEMVMDKKHFKLWRRPITGTHLYQYRVFGTYTDVTPRQFFNVQLDTEYRKKWDALVIKLEVIERDVVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNVMVLVSRAVEHPSVPESPEFVRVRSYESQMVIRPHKSFDENGFDYLLTYSDNPQTVFPRYCVSWMVSSGMPDFLEKLHMATLKAKNMEIKVKDYISSKPMEVGSEAKATAPSSERKSEGSCGPARIEYA", "length": 380, "header": "tr|F1SU33-1|F1SU33_PIG Isoform 1 of StAR-related lipid transfer protein 7, mitochondrial OS=Sus scrofa OX=9823 GN=STARD7 PE=1 SV=2 CANONICAL=F1SU33-1" }, "isoforms": [ { "isoform_ac": "F1SU33-1", "url": "https://www.uniprot.org/uniprotkb/F1SU33/entry#F1SU33-1", "sequence": { "sequence": "MFPRRPPASLAAWLVGAAAAGRAGARGGGLLSLLANQCSFVTGLRVRRAQQIAQLYGRLYSESSRRVLLGRLWRRLRGRPGHASALMAALAGVFVWDEERIQEEELQRSIDEMKRLEEMSMFQTSGVERPPPEPKSQTEGNEDSGGKEQPWEMVMDKKHFKLWRRPITGTHLYQYRVFGTYTDVTPRQFFNVQLDTEYRKKWDALVIKLEVIERDVVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDQENNVMVLVSRAVEHPSVPESPEFVRVRSYESQMVIRPHKSFDENGFDYLLTYSDNPQTVFPRYCVSWMVSSGMPDFLEKLHMATLKAKNMEIKVKDYISSKPMEVGSEAKATAPSSERKSEGSCGPARIEYA", "length": 380, "header": "tr|F1SU33-1|F1SU33_PIG Isoform 1 of StAR-related lipid transfer protein 7, mitochondrial OS=Sus scrofa OX=9823 GN=STARD7 PE=1 SV=2 CANONICAL=F1SU33-1" }, "locus": { "chromosome": "3", "start_pos": 47015993, "end_pos": 46993162, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008909.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008909.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008683.2", "url": "https://www.ensembl.org/id/ENSSSCP00000008683.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU33", "url": "https://www.uniprot.org/uniprotkb/F1SU33" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525865", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525865", "resource": "KEGG Pathway" }, { "id": "R-SSC-1483191", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1483191", "resource": "Reactome", "description": "Synthesis of PC" }, { "id": "R-SSC-2142789", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2142789", "resource": "Reactome", "description": "Ubiquinol biosynthesis" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1LZP9-1", "protein_name": "StAR-related lipid transfer protein 7, mitochondrial", "gene_name": "STARD7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFPRRPPTGLAAWLVGAAAAAAGRAGARGGGLLALLANQCRFVTGLRVRRAQQIAQLYGRLYSESSRRVLLGRLWRRLRGRPGHASALMAALAGVFVWDEERIREEELQRSIDEMKRLEEMSGMFRSSGVERHPPEPKSQTEGVEDSGGTEQPWEMVMDKKHFKLWRRPISGTPLYQYRVFGTYTDVTPRQFFNVQLDTEYRKKWDALVIKLEVIERDVVSGSEVLHWVTHFPYPMYSRDYVYVRRYSVDEENNVMVLVSRAVEHPSVPESPEFVRVRSYESQMVIRPHKSFDENGFDYLLTYSDNPQTVFPRYCVSWMVSSGMPDFLEKLHTATLKAKNMEIKVKDYISSKPLEVGSEAKAATPSSERKSEGSCGPARIEYA", "length": 383 }, "evidence": [ 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"length": 1833, "header": "tr|F1SU41-1|F1SU41_PIG Isoform 1 of Zinc finger SWIM-type containing 8 OS=Sus scrofa OX=9823 GN=ZSWIM8 PE=4 SV=4 CANONICAL=F1SU41-1" }, "locus": { "chromosome": "14", "start_pos": 76525603, "end_pos": 76511594, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011282.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011282.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010990.4", "url": "https://www.ensembl.org/id/ENSSSCP00000010990.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1082, "start_aa": "Thr", "end_pos": 1082, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1082", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1481, "start_aa": "Thr", "end_pos": 1481, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1481", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1570, "start_aa": "Thr", "end_pos": 1570, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1570", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 276, "start_aa": "Thr", "end_pos": 276, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr276", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 941, "start_aa": "Thr", "end_pos": 941, 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"https://www.uniprot.org/uniprotkb/F1SU41" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SU41", "url": "https://www.uniprot.org/uniprotkb/F1SU41" } ], "pmid": "" }, { "name": "Cul2-RING ubiquitin ligase complex", "id": "GO:0031462", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031462", "evidence": [ { "database": "UniProtKB", "id": "F1SU41", "url": "https://www.uniprot.org/uniprotkb/F1SU41" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SU41", "url": 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"database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU47/entry#names_and_taxonomy" } ] }, { "name": "RING-type E3 ubiquitin transferase NEURL3", "type": "synonym", "evidence": [ { "id": "F1SU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU47/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NEURL3", "url": "https://www.uniprot.org/uniprotkb/F1SU47", "locus": { "chromosome": "3", "start_pos": 46751547, "end_pos": 46742971, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008124", "url": "https://www.ensembl.org/id/ENSSSCG00000008124" } ] } } ], 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"categories": [ "Protein Classification" ] }, { "id": "ssc:100524797", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524797", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HTHFCSS", "url": "https://omabrowser.org/oma/group/HTHFCSS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SU47", "url": "https://www.orthodb.org/?gene=F1SU47", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12429", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12429", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12429:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12429:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07177", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07177", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13920", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13920", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003124887", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124887", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU47-1", "url": "https://www.uniprot.org/uniprotkb/F1SU47-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGAQICSQADAEAPREALRFHATAMGAQVRLDVQRRTARRRATFHDGIVFSQRPVRRGERVALRVLCHEHGWFGGLRVGFTRLDPARLSAPSLPPFVCPDLEQQSPTWAAMLPNGCALAGDVVHFWVNCQGRLFAQVNAGPWLLLRKGVLMDAPLWAVMDVYGTTKAIELLDEAMDPTASAFSTTMPWILSDETLPEPKATAREDCAICFHQAANTCLVPCGHTHFCSSCALRVFKDTAKCPLCRWEIKAVAPAWGLPLWALETASQCR", "length": 269, "header": "tr|F1SU47-1|F1SU47_PIG Isoform 1 of E3 ubiquitin-protein ligase NEURL3 OS=Sus scrofa OX=9823 GN=NEURL3 PE=4 SV=3 CANONICAL=F1SU47-1" }, "isoforms": [ { "isoform_ac": "F1SU47-1", "url": "https://www.uniprot.org/uniprotkb/F1SU47/entry#F1SU47-1", "sequence": { "sequence": "MGAQICSQADAEAPREALRFHATAMGAQVRLDVQRRTARRRATFHDGIVFSQRPVRRGERVALRVLCHEHGWFGGLRVGFTRLDPARLSAPSLPPFVCPDLEQQSPTWAAMLPNGCALAGDVVHFWVNCQGRLFAQVNAGPWLLLRKGVLMDAPLWAVMDVYGTTKAIELLDEAMDPTASAFSTTMPWILSDETLPEPKATAREDCAICFHQAANTCLVPCGHTHFCSSCALRVFKDTAKCPLCRWEIKAVAPAWGLPLWALETASQCR", "length": 269, "header": "tr|F1SU47-1|F1SU47_PIG Isoform 1 of E3 ubiquitin-protein ligase NEURL3 OS=Sus scrofa OX=9823 GN=NEURL3 PE=4 SV=3 CANONICAL=F1SU47-1" }, "locus": { "chromosome": "3", "start_pos": 46750669, "end_pos": 46743039, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000056968.2", "url": "https://www.ensembl.org/id/ENSSSCT00000056968.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040269.1", "url": "https://www.ensembl.org/id/ENSSSCP00000040269.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524797", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524797", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q5M870-1", "protein_name": "E3 ubiquitin-protein ligase NEURL3", "gene_name": "Neurl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGSRLSPEANAEVPREALSFHGDATGAQVHLDDQRSTARRRSTFHDGIVFSQRPVWPGERVALRVLRHEDGWCGGLRVGFTRLDPAQVAASCLPPFVCPDLEEQSPTWAALLPEGFVRAGNVVCFWVNRRGWLFAKVNAGRPLLLRKDVLVQGAPLWAVMDVYGTTKAIELLDPKANAWITSGEPMPESEVTSGEECVICFHNTANTRLMPCGHSQFCGSCAWHIFKDTARCPMCRWQIEEVAVEPSVKSGEGS", "length": 254 }, "evidence": [ { "id": "F1SU47", "url": "https://omabrowser.org/oma/group/F1SU47/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CJC5-1", "protein_name": "E3 ubiquitin-protein ligase NEURL3", "gene_name": "Neurl3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSLLSPEANAEVPREALSFHGNATGAQVHLDDQRSTARRRSTFHDGIVFSQRPVWPGERVALRVLRHEEGWCGGLRVGFTRLDPAQVAASCLPPFVCPDLEEQSPTWAALLPEGFVRAGNVVCFWVNRRGWLFAKVNAGRPLLLRKDVLVQGAPLWAVMDVYGTTKAIELLDPKANAWIRSGEPVPESEVISGEECVICFHNTANTRLMPCGHSHFCGSCAWHIFKDTARCPICRWQIEEVAVVSSLKAEEGS", "length": 254 }, "evidence": [ { "id": "F1SU47", "url": "https://omabrowser.org/oma/group/F1SU47/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96EH8-1", "protein_name": "E3 ubiquitin-protein ligase NEURL3", "gene_name": "NEURL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGAQLCFEANAKAPREALRFHAEAKGAQVRLDTRGCIAHRRTTFHDGIVFSQRPVRLGERVALRVLREESGWCGGLRVGFTRLDPACVSVPSLPPFLCPDLEEQSPTWAAVLPEGCALTGDLVRFWVDRRGCLFAKVNAGCRLLLREGVPVGAPLWAVMDVYGTTKAIELLDPTASRLPTPMPWDLSNKAVPEPKATPGEECAICFYHAANTRLVPCGHTYFCRYCAWRVFSDTAKCPVCRWQIEAVAPAQGPPALRVEEGS", "length": 262 }, "evidence": [ { "id": "F1SU47", "url": "https://omabrowser.org/oma/group/F1SU47/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "early endosome", "id": "GO:0005769", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005769", "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "pmid": "" }, { "name": "positive regulation of proteasomal protein catabolic process", "id": "GO:1901800", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1901800", "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "pmid": "" }, { "name": "ubiquitin-dependent endocytosis", "id": "GO:0070086", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070086", "evidence": [ { "database": "UniProtKB", "id": "F1SU47", "url": "https://www.uniprot.org/uniprotkb/F1SU47" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU47" }, { "id": "PS51065", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51065" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NHR", "eco_id": "ECO_0000259", "start_pos": 17, "end_pos": 173, "start_aa": "Ala", "end_aa": "Glu", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SU47", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU47" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 206, "end_pos": 245, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU55-1", "uniprot_ac": "F1SU55", "uniprot_id": "F1SU55_PIG", "mass": { "chemical_mass": 95047.0, "monoisotopic_mass": 95047.0 }, "refseq": {}, "gene_names": [ { "name": "SYNPO2L", "type": "recommended", "evidence": [ { "id": "F1SU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ] } ], "protein_names": [ { "name": "Synaptopodin 2 like", "type": "synonym", "evidence": [ { "id": "F1SU55", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU55/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SYNPO2L", "url": "https://www.uniprot.org/uniprotkb/F1SU55", "locus": { "chromosome": "14", "start_pos": 76456168, "end_pos": 76466641, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010303", "url": "https://www.ensembl.org/id/ENSSSCG00000010303" } ] } } ], "crossref": [ { "id": "F1SU55", "url": "https://alphafold.ebi.ac.uk/entry/F1SU55", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010303", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010303", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR051976", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051976", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "MVQNMDG", "url": "https://omabrowser.org/oma/group/MVQNMDG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24217", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24217", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24217:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24217:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A287ACF3", "url": "https://www.uniprot.org/uniprotkb/A0A287ACF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ACF3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ACF3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU55-1", "url": "https://www.uniprot.org/uniprotkb/F1SU55-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLIDASGNQLVLTVRRREDEGPVRSPSPGELQALSPLSPLSPEPPGAPVPQPLQPGSLLSPPDSEAYYGETDSDADGPATQEKPRRPRRRGPTRPTAPGAPPDEIYLSDSPAEPAPAVLGSPSQGDSRLSSPSWEDGSTLQPPPAEALLLPRGPLRPGPHLIPMVGPVPHPVAEDLTTTYTQKAKQAKLQRAESLQERSVKEAKTKCRTIASLLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQSDWDSPYLDMELARPGSGAAEGQGPGQGGQLIEASGRGAQLFEQQRQRAASSTQELAPEGPATMLNGQGLQTPPRAQSAPPEAAVPASSPSPAPEAIPRPFLPGGGVSTPAPSIFNRSARPFTPGLQGHRPGTTSVIFRPLAPKRANESLGGLSPAPPPFLSSPQGTTPLPSFTSGVPSHVSAPGSPGTPRSLGPLTATSSLYIPAPSRPVTPGGAPEPPAPSSGAAMTSTASIFLSAPPRSAPRPEAPAPGPAAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGNEETKNSPNPELLSLVQNLDEKPRPGGGESGPEEDALSLGAEACNFMQPPGGRSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPTRGLLDGLVNGASPSAGVPEPPRLQGRGGELFAKRQSRADRYVVEATPGPGLGPRPRSPSPTPSLPSSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPKAQSQGPRAAPKQGIKALDFMRHQPYQLKTAMFCFDEVPPTPGPTALGPPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWRAELASAPVLSPAPPPESPRGLGTSPSSCGFQVARPRFSATRTGLQAHVWRPGAGHH", "length": 909, "header": "tr|F1SU55-1|F1SU55_PIG Isoform 1 of Synaptopodin 2 like OS=Sus scrofa OX=9823 GN=SYNPO2L PE=3 SV=3 CANONICAL=F1SU55-1" }, "isoforms": [ { "isoform_ac": "A0A287ACF3-1", "url": "https://www.uniprot.org/uniprotkb/F1SU55/entry#A0A287ACF3-1", "sequence": { "sequence": "MGVAQAGPAPANTAFLGMETFEPISQEPLSQASCDKAPSPVSELQDPFYAELQRAESLQERSVKEAKTKCRTIASLLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQSDWDSPYLDMELARPGSGAAEGQGPGQGGQLIEASGRGAQLFEQQRQRAASSTQELAPEGPATMLNGQGLQTPPRAQSAPPEAAVPASSPSPAPEAIPRPFLPGGGVSTPAPSIFNRSARPFTPGLQGHRPGTTSVIFRPLAPKRANESLGGLSPAPPPFLSSPQGTTPLPSFTSGVPSHVSAPGSPGTPRSLGPLTATSSLYIPAPSRPVTPGGAPEPPAPSSGAAMTSTASIFLSAPPRSAPRPEAPAPGPAAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGNEETKNSPNPELLSLVQNLDEKPRPGGGESGPEEDALSLGAEACNFMQPPGGRSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPTRGLLDGLVNGASPSAGVPEPPRLQGRGGELFAKRQSRADRYVVEATPGPGLGPRPRSPSPTPSLPSSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPKAQSQGPRAAPKQGIKALDFMRHQPYQLKTAMFCFDEVPPTPGPTALGPPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWRAELASAPVLSPAPPPESPRGLGTSPSSCGFQVARPRFSATRTGLQAHVWRPGAGHH", "length": 771, "header": "tr|A0A287ACF3-1|A0A287ACF3_PIG Computationally mapped isoform of Synaptopodin 2 like OS=Sus scrofa OX=9823 GN=SYNPO2L PE=3 SV=2 CANONICAL=F1SU55-1" }, "locus": { "chromosome": "14", "start_pos": 76462283, "end_pos": 76457690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063367.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063367.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000041502.2", "url": "https://www.ensembl.org/id/ENSSSCP00000041502.2" } ] } }, { "isoform_ac": "F1SU55-1", "url": "https://www.uniprot.org/uniprotkb/F1SU55/entry#F1SU55-1", "sequence": { "sequence": "MSLIDASGNQLVLTVRRREDEGPVRSPSPGELQALSPLSPLSPEPPGAPVPQPLQPGSLLSPPDSEAYYGETDSDADGPATQEKPRRPRRRGPTRPTAPGAPPDEIYLSDSPAEPAPAVLGSPSQGDSRLSSPSWEDGSTLQPPPAEALLLPRGPLRPGPHLIPMVGPVPHPVAEDLTTTYTQKAKQAKLQRAESLQERSVKEAKTKCRTIASLLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQSDWDSPYLDMELARPGSGAAEGQGPGQGGQLIEASGRGAQLFEQQRQRAASSTQELAPEGPATMLNGQGLQTPPRAQSAPPEAAVPASSPSPAPEAIPRPFLPGGGVSTPAPSIFNRSARPFTPGLQGHRPGTTSVIFRPLAPKRANESLGGLSPAPPPFLSSPQGTTPLPSFTSGVPSHVSAPGSPGTPRSLGPLTATSSLYIPAPSRPVTPGGAPEPPAPSSGAAMTSTASIFLSAPPRSAPRPEAPAPGPAAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGNEETKNSPNPELLSLVQNLDEKPRPGGGESGPEEDALSLGAEACNFMQPPGGRSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPTRGLLDGLVNGASPSAGVPEPPRLQGRGGELFAKRQSRADRYVVEATPGPGLGPRPRSPSPTPSLPSSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPKAQSQGPRAAPKQGIKALDFMRHQPYQLKTAMFCFDEVPPTPGPTALGPPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWRAELASAPVLSPAPPPESPRGLGTSPSSCGFQVARPRFSATRTGLQAHVWRPGAGHH", "length": 909, "header": "tr|F1SU55-1|F1SU55_PIG Isoform 1 of Synaptopodin 2 like OS=Sus scrofa OX=9823 GN=SYNPO2L PE=3 SV=3 CANONICAL=F1SU55-1" }, "locus": { "chromosome": "14", "start_pos": 76464444, "end_pos": 76457690, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011276.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011276.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010984.3", "url": "https://www.ensembl.org/id/ENSSSCP00000010984.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 261, "start_aa": "Thr", "end_pos": 261, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr261", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 492, "start_aa": "Thr", "end_pos": 492, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr492", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 709, "start_aa": "Thr", "end_pos": 709, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr709", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 724, "start_aa": "Thr", "end_pos": 724, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr724", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 802, "start_aa": "Thr", "end_pos": 802, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr802", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 806, "start_aa": "Thr", "end_pos": 806, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr806", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E1BDC7-1", "protein_name": "Synaptopodin 2-like protein", "gene_name": "SYNPO2L", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGAEEEVLVTLSGGAPWGFRLHGGAEQRKPLQVSKIRRRSQAGRAGLRERDQLLAINGVSCTSLSHASAMGLIDASGNQLVLTVRRVEDEGPVRSPSPGELQARSPLSPLSPEPPGAPVPQPLQPGSLLSPPDSEAYYGETDSDADGPATQEKPRRPRRRGPTRPTPPGAPPDEVYLSDSPAEPAPAVLGPPSQGDSRVSSPSWEDGTTLQPPPAEALLLPHGPLRPGPNLIPMVGPVPHPVAEDLTTTYTQKAKQAKLQRAESLQERSVKEAKTKCRTIAALLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGLPPTSESELDEEAFSDARSLTNQSDWDSPYLDMELARPSSGTAEGRGLSEASGRGAQLFEQQRQRTASITQQPAQEVPVATLNGQGLQSPPRPQSAPPEAALLPSSPSPAPVASPRPFLPGCGTSTSAPSIFNRSARPFTPGLQGQRSGTTSVIFRPLAPKRANESLGGLSPAPPPFLSPPQGTTPVPSLTSGVPSHVPVPASPSTPRPTGPVTATSSLYIPAPNRPVTPGGAPEAPAPASGAAMTSTASIFLSSPLRPAARPEAPAPSSAAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRSGNEETKNSPNPELLSLVQNLDEKPRAGGAESGAEEDALSLGAEACNFMQPPGGRSYKTLPHVTAKTPPPMAPKTPPPTTPKTPPPVAPKPPSRGFLDGLVNGAAPSAGVPETPRLQGRGGELFAKRQSRADRYVVEAPPGPGLGPRPRSPSPTPSLPSSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPSKTQSQGPRAATKQGIKALDFMRHQPYQLKTAMFCFDEVPPTPGPTSSGPPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWRTELASAPVLSPPPPPESPRGLGTSPSSCGFQVARPRFSATRTGWQAHVWRPGAGHH", "length": 973 }, "evidence": [ { "id": "F1SU55", "url": "https://omabrowser.org/oma/group/F1SU55/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q9H987-1", "protein_name": "Synaptopodin 2-like protein", "gene_name": "SYNPO2L", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGAEEEVLVTLSGGAPWGFRLHGGAEQRKPLQVSKIRRRSQAGRAGLRERDQLLAINGVSCTNLSHASAMSLIDASGNQLVLTVQRLADEGPVQSPSPHELQVLSPLSPLSPEPPGAPVPQPLQPGSLRSPPDSEAYYGETDSDADGPATQEKPRRPRRRGPTRPTPPGAPPDEVYLSDSPAEPAPTIPGPPSQGDSRVSSPSWEDGAALQPPPAEALLLPHGPLRPGPHLIPMVGPVPHPVAEDLTTTYTQKAKQAKLQRAESLQEKSIKEAKTKCRTIASLLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQSDWDSPYLDMELARAGSRASEGQGSGLGGQLSEVSGRGVQLFEQQRQRADSSTQELARVEPAAMLNGEGLQSPPRAQSAPPEAAVLPPSPLPAPVASPRPFQPGGGAPTPAPSIFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSSLYIPAPSRPVTPGGAPEPPAPPSAAAMTSTASIFLSAPLRPSARPEAPAPGPGAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGKEETKNSPNPELLSLVQNLDEKPRAGGAESGPEEDALSLGAEACNFMQPVGARSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAASSAGIPEPPRLQGRGGELFAKRQSRADRYVVEGTPGPGLGPRPRSPSPTPSLPPSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPKAQSQGPRATPKQGIKALDFMRHQPYQLKTAMFCFDEVPPTPGPIASGSPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWRTELASAPVPSPAPPPEAPRGLGASPSSCGFQVARPRFSATRTGLQAHVWRPGAGHQ", "length": 977 }, "evidence": [ { "id": "F1SU55", "url": "https://omabrowser.org/oma/group/F1SU55/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "positive regulation of actin filament bundle assembly", "id": "GO:0032233", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032233", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "actin binding", "id": "GO:0003779", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003779", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "pmid": "" }, { "name": "actin cytoskeleton", "id": "GO:0015629", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015629", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "pmid": "" }, { "name": "Z disc", "id": "GO:0030018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030018", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "pmid": "" }, { "name": "organelle", "id": "GO:0043226", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043226", "evidence": [ { "database": "UniProtKB", "id": "F1SU55", "url": "https://www.uniprot.org/uniprotkb/F1SU55" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 279, "end_pos": 281, "annotation": "n_glycosylation_sequon" }, { "start_pos": 396, "end_pos": 398, "annotation": "n_glycosylation_sequon" }, { "start_pos": 427, "end_pos": 429, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SU55-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 909, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SU55-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SU55" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 261, 492, 709, 724, 802, 806 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 279, "end_pos": 281 }, { "start_pos": 396, "end_pos": 398 }, { "start_pos": 427, "end_pos": 429 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 6 }, { "field": "total_sites", "count": 6 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 6 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 6 }, { "field": "exact_o_linked_sites", "count": 6 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 6 }, { "field": "total_sites", "count": 6 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 6 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 6 }, { "field": "exact_o_linked_sites", "count": 6 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU62-1", "uniprot_ac": "F1SU62", "uniprot_id": "F1SU62_PIG", "mass": { "chemical_mass": 49454.0, "monoisotopic_mass": 49454.0 }, "refseq": { "ac": "XP_005658652", "name": "zinc finger protein 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658652" }, "gene_names": [ { "name": "ZNF2", "type": "recommended", "evidence": [ { "id": "F1SU62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ] }, { "name": "ZNF2", "type": "synonym", "evidence": [ { "id": "XP_005658652", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658652" } ] } ], "protein_names": [ { "name": "Zinc finger protein 2", "type": "recommended", "evidence": [ { "id": "F1SU62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU62/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005658652", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658652" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" }, { "database": "UniProtKB", "id": "A0A480XPH4", "url": "https://www.uniprot.org/uniprotkb/A0A480XPH4#function" }, { "database": "UniProtKB", "id": "F1SU63", "url": "https://www.uniprot.org/uniprotkb/F1SU63#function" }, { "database": "UniProtKB", "id": "A0A8W4FDQ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDQ4#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF2", "url": "https://www.uniprot.org/uniprotkb/F1SU62", "locus": { "chromosome": "3", "start_pos": 46086873, "end_pos": 46106417, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008117", "url": "https://www.ensembl.org/id/ENSSSCG00000008117" } ] } } ], "crossref": [ { "id": "F1SU62", "url": "https://alphafold.ebi.ac.uk/entry/F1SU62", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008117", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008117", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100620765", "url": "https://www.ncbi.nlm.nih.gov/gene/100620765", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050758", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050758", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620765", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620765", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A480XPH4", "url": "https://www.orthodb.org/?gene=A0A480XPH4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SU62", "url": "https://www.orthodb.org/?gene=F1SU62", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23234", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23234", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23234:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23234:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23234:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23234:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24381", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24381", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24381:SF384", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24381:SF384", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13465", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13465", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005658652", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005658652", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A480XPH4", "url": "https://www.uniprot.org/uniprotkb/A0A480XPH4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480XPH4-1", "url": "https://www.uniprot.org/uniprotkb/A0A480XPH4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDQ4", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU62-1", "url": "https://www.uniprot.org/uniprotkb/F1SU62-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU63", "url": "https://www.uniprot.org/uniprotkb/F1SU63", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU63-1", "url": "https://www.uniprot.org/uniprotkb/F1SU63-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSKETSCLHIALEKFRKKDTVTFEDVAVVFTDEEWRHLIPIQRDLYKEVMLENYKSIVSLGLPVPGPDVIFQLKRGDEPWIEELHGSEGKECAENVYLDWKTKPEIQGASEEEKSEGTLRGKLERKDPVSPKLKVHALEGSLGTKKKSPVVEAFKKSLFQGENLWHGATPPKKIVTKERDQECRDCGKTFFDHSSLIRHQRTHTGEKPYDCPECGKAFSHRSSLSRHLMSHTGESPYECNACGKAFFDRSSLTVHQRIHTGEKPFKCNECGKAFFDRSSLTRHQRIHTGESPYECNQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGEPRYQCSECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECSVCGKVFSSKSSVIQHQRRYAKQGID", "length": 433, "header": "tr|F1SU62-1|F1SU62_PIG Isoform 1 of Zinc finger protein 2 OS=Sus scrofa OX=9823 GN=ZNF2 PE=3 SV=4 CANONICAL=F1SU62-1" }, "isoforms": [ { "isoform_ac": "A0A480XPH4-1", "url": "https://www.uniprot.org/uniprotkb/F1SU62/entry#A0A480XPH4-1", "sequence": { "sequence": "MAAVSPSARCQDTVTFEDVAVVFTDEEWRHLIPIQRDLYKEVMLENYKSIVSLGLPVPGPDVIFQLKRGDEPWIEELHGSEGKECAENVYLDWKTKPEIQGASEEEKSEGTLRGKLERKDPVSPKLKVHALEGSLGTKKKSPVVEAFKKSLFQGENLWHGATPPKKIVTKERDQECRDCGKTFFDHSSLIRHQRTHTGEKPYDCPECGKAFSHRSSLSRHLMSHTGESPYECNACGKAFFDRSSLTVHQRIHTGEKPFKCNECGKAFFDRSSLTRHQRIHTGESPYECNQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGEPRYQCSECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECSVCGKVFSSKSSVIQHQRRYAKQGID", "length": 426, "header": "tr|A0A480XPH4-1|A0A480XPH4_PIG Computationally mapped isoform of Zinc finger protein 2 OS=Sus scrofa OX=9823 GN=ZNF2 PE=3 SV=1 CANONICAL=F1SU62-1" }, "locus": { "chromosome": "3", "start_pos": 46095893, "end_pos": 46088776, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049906.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049906.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037443.3", "url": "https://www.ensembl.org/id/ENSSSCP00000037443.3" } ] } }, { "isoform_ac": "A0A8W4FDQ4-1", "url": "https://www.uniprot.org/uniprotkb/F1SU62/entry#A0A8W4FDQ4-1", "sequence": { "sequence": "MAAVSPSARCQDTVTFEDVAVVFTDEEWRHLIPIQRDLYKEVMLENYKSIVSLGLPVPGPDVIFQLKRGDEPWIEELHGSEGKECAENVYLDWKTKPEIQGASEEEKSEGTLRGKLERKDPVSPKLKVHALEGSLGTKKKSPVVEAFKKSLFQGENLWHGATPPKKIVTKERDQECRDCGKTFFDHSSLIRHQRTHTGEKPYDCPECGKAFSHRSSLSRHLMSHTGESPYECNACGKAFFDRSSLTVHQRIHTGEKPFKCNECGKAFFDRSSLTRHQRIHTGESPYECNQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGEPRYQCSECGKAFFDRSSLTQHQKIHTGDKPYECMCVGKFSVLNHQLFNISDAMPNRE", "length": 396, "header": "tr|A0A8W4FDQ4-1|A0A8W4FDQ4_PIG Computationally mapped isoform of Zinc finger protein 2 OS=Sus scrofa OX=9823 GN=ZNF2 PE=3 SV=1 CANONICAL=F1SU62-1" }, "locus": { "chromosome": "3", "start_pos": 46095893, "end_pos": 46088781, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093555.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093555.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076989.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076989.1" } ] } }, { "isoform_ac": "F1SU62-1", "url": "https://www.uniprot.org/uniprotkb/F1SU62/entry#F1SU62-1", "sequence": { "sequence": "MSKETSCLHIALEKFRKKDTVTFEDVAVVFTDEEWRHLIPIQRDLYKEVMLENYKSIVSLGLPVPGPDVIFQLKRGDEPWIEELHGSEGKECAENVYLDWKTKPEIQGASEEEKSEGTLRGKLERKDPVSPKLKVHALEGSLGTKKKSPVVEAFKKSLFQGENLWHGATPPKKIVTKERDQECRDCGKTFFDHSSLIRHQRTHTGEKPYDCPECGKAFSHRSSLSRHLMSHTGESPYECNACGKAFFDRSSLTVHQRIHTGEKPFKCNECGKAFFDRSSLTRHQRIHTGESPYECNQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGEPRYQCSECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECSVCGKVFSSKSSVIQHQRRYAKQGID", "length": 433, "header": "tr|F1SU62-1|F1SU62_PIG Isoform 1 of Zinc finger protein 2 OS=Sus scrofa OX=9823 GN=ZNF2 PE=3 SV=4 CANONICAL=F1SU62-1" }, "locus": { "chromosome": "3", "start_pos": 46094828, "end_pos": 46088776, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008893.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008893.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008667.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008667.4" } ] } }, { "isoform_ac": "F1SU63-1", "url": "https://www.uniprot.org/uniprotkb/F1SU62/entry#F1SU63-1", "sequence": { "sequence": "MAAVSPSARCQDTVTFEDVAVVFTDEEWRHLIPIQRDLYKEVMLENYKSIVSLDWKTKPEIQGASEEEKSEGTLRGKLERKDPVSPKLKVHALEGSLGTKKKSPVVEAFKKSLFQGENLWHGATPPKKIVTKERDQECRDCGKTFFDHSSLIRHQRTHTGEKPYDCPECGKAFSHRSSLSRHLMSHTGESPYECNACGKAFFDRSSLTVHQRIHTGEKPFKCNECGKAFFDRSSLTRHQRIHTGESPYECNQCGKAFSQKSILTRHQLIHTGRKPYECNECGKAFYGVSSLNRHQKAHAGEPRYQCSECGKAFFDRSSLTQHQKIHTGDKPYECSECGKAFSQRCRLTRHQRVHTGEKPFECSVCGKVFSSKSSVIQHQRRYAKQGID", "length": 388, "header": "tr|F1SU63-1|F1SU63_PIG Computationally mapped isoform of Zinc finger protein 2 OS=Sus scrofa OX=9823 GN=ZNF2 PE=3 SV=4 CANONICAL=F1SU62-1" }, "locus": { "chromosome": "3", "start_pos": 46095893, "end_pos": 46088776, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008892.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008892.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008666.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008666.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620765", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620765", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "DNA-binding transcription factor activity", "id": "GO:0003700", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003700", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "F1SU62", "url": "https://www.uniprot.org/uniprotkb/F1SU62" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SU62-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 433, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SU62-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SU62" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SU62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU62" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 181, "end_pos": 208, "start_aa": "Gln", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SU62", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU62" }, { "id": "PS50805", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50805" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KRAB", "eco_id": "ECO_0000259", "start_pos": 21, "end_pos": 92, "start_aa": "Val", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU72-1", "uniprot_ac": "F1SU72", "uniprot_id": "F1SU72_PIG", "mass": { "chemical_mass": 30183.0, "monoisotopic_mass": 30183.0 }, "refseq": { "ac": "XP_003483546", "name": "dnaJ homolog subfamily C member 9", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483546" }, "gene_names": [ { "name": "DNAJC9", "type": "recommended", "evidence": [ { "id": "F1SU72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ] }, { "name": "DNAJC9", "type": "synonym", "evidence": [ { "id": "XP_003483546", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483546" } ] } ], "protein_names": [ { "name": "DnaJ homolog subfamily C member 9", "type": "recommended", "evidence": [ { "id": "F1SU72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU72/entry#names_and_taxonomy" } ] }, { "name": "dnaJ homolog subfamily C member 9", "type": "synonym", "evidence": [ { "id": "XP_003483546", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483546" } ] } ], "function": [ { "annotation": "Acts as a dual histone chaperone and heat shock co-chaperone. As a histone chaperone, forms a co-chaperone complex with MCM2 and histone H3-H4 heterodimers; and may thereby assist MCM2 in histone H3-H4 heterodimer recognition and facilitate the assembly of histones into nucleosomes. May also act as a histone co-chaperone together with TONSL. May recruit histone chaperones ASF1A, NASP and SPT2 to histone H3-H4 heterodimers. Also plays a role as co-chaperone of the HSP70 family of molecular chaperone proteins, such as HSPA1A, HSPA1B and HSPA8. As a co-chaperone, may play a role in the recruitment of HSP70-type molecular chaperone machinery to histone H3-H4 substrates, thereby maintaining the histone structural integrity. Exhibits activity to assemble histones onto DNA in vitro.", "evidence": [ { "database": "UniProtKB", "id": "I3LRH1", "url": "https://www.uniprot.org/uniprotkb/I3LRH1#function" }, { "database": "UniProtKB", "id": "ARBA00054761", "url": "https://www.uniprot.org/uniprotkb/ARBA00054761#function" }, { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "DNAJC9", "url": "https://www.uniprot.org/uniprotkb/F1SU72", "locus": { "chromosome": "14", "start_pos": 76061446, "end_pos": 76074604, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023482", "url": "https://www.ensembl.org/id/ENSSSCG00000023482" } ] } } ], "crossref": [ { "id": "ENSSSCG00000023482", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023482", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd06257", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd06257", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100739807", "url": "https://www.ncbi.nlm.nih.gov/gene/100739807", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001623", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001623", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018253", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018253", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036869", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036869", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052594", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052594", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR056453", "url": "https://www.ebi.ac.uk/interpro/entry/IPR056453", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100739807", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739807", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WLDLWSK", "url": "https://omabrowser.org/oma/group/WLDLWSK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SU72", "url": "https://www.orthodb.org/?gene=F1SU72", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44144", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44144", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44144:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44144:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00226", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00226", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23302", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23302", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003483546", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003483546", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU72-1", "url": "https://www.uniprot.org/uniprotkb/F1SU72-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRH1", "url": "https://www.uniprot.org/uniprotkb/I3LRH1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRH1-1", "url": "https://www.uniprot.org/uniprotkb/I3LRH1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGLLELCEEVFGTTDLYRVLGVRREASDGEVRRGYHKVSLQVHPDRVGEGDKQDATRRFQILGKVYSVLSDKDQRAVYDEQGTVDEDSDVLSQDRDWETYWRLLFKKISLEDIQAFEKTYKGSEEELADVKQAYLDFKGDMDQIMESVLCVQYTEEPRIRNIIQQAIDAGEVPSYNAFVKESKQKMNARKRRAQEEAKEAEMSRKELGLDEGVDSLKAVIQSRQKDRQKEMDNFLAQMEAKYCKPSKRGQKKTTLKKEKK", "length": 260, "header": "tr|F1SU72-1|F1SU72_PIG Isoform 1 of DnaJ homolog subfamily C member 9 OS=Sus scrofa OX=9823 GN=DNAJC9 PE=1 SV=1 CANONICAL=F1SU72-1" }, "isoforms": [ { "isoform_ac": "F1SU72-1", "url": "https://www.uniprot.org/uniprotkb/F1SU72/entry#F1SU72-1", "sequence": { "sequence": "MGLLELCEEVFGTTDLYRVLGVRREASDGEVRRGYHKVSLQVHPDRVGEGDKQDATRRFQILGKVYSVLSDKDQRAVYDEQGTVDEDSDVLSQDRDWETYWRLLFKKISLEDIQAFEKTYKGSEEELADVKQAYLDFKGDMDQIMESVLCVQYTEEPRIRNIIQQAIDAGEVPSYNAFVKESKQKMNARKRRAQEEAKEAEMSRKELGLDEGVDSLKAVIQSRQKDRQKEMDNFLAQMEAKYCKPSKRGQKKTTLKKEKK", "length": 260, "header": "tr|F1SU72-1|F1SU72_PIG Isoform 1 of DnaJ homolog subfamily C member 9 OS=Sus scrofa OX=9823 GN=DNAJC9 PE=1 SV=1 CANONICAL=F1SU72-1" }, "locus": { "chromosome": "14", "start_pos": 76070176, "end_pos": 76065932, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022959.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022959.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024116.1", "url": "https://www.ensembl.org/id/ENSSSCP00000024116.1" } ] } }, { "isoform_ac": "I3LRH1-1", "url": "https://www.uniprot.org/uniprotkb/F1SU72/entry#I3LRH1-1", "sequence": { "sequence": "MFMAYPSNSSCNHLRSSHQLKNTVTSKGPAVFSEAAARSAPLPAMGLLELCEEVFGTTDLYRVLGVRREASDGEVRRGYHKVSLQVHPDRVGEGDKQDATRRFQILGKVYSVLSDKDQRAVYDEQGTVDEDSDVLSQDRDWETYWRLLFKKISLEDIQAFEKTYKGSEEELADVKQAYLDFKGDMDQIMESVLCVQYTEEPRIRNIIQQAIDAGEVPSYNAFVKESKQKMNARKRRAQEEAKEAEMSRKELGLDEGVDSLKAVIQSRQKDRQKEMDNFLAQMEAKYCKPSKRGQKKTTLKKEKK", "length": 304, "header": "tr|I3LRH1-1|I3LRH1_PIG Computationally mapped isoform of DnaJ homolog subfamily C member 9 OS=Sus scrofa OX=9823 GN=DNAJC9 PE=1 SV=3 CANONICAL=F1SU72-1" }, "locus": { "chromosome": "14", "start_pos": 76072503, "end_pos": 76065932, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031242.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031242.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026705.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026705.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739807", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739807", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1I9LLP0-1", "protein_name": "Chaperone DnaJ-domain superfamily protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEIYWRHKFSEKQNFNSITYLWCVLSRRRSYTRTLKMENDGRSNEKNLYEVLGVEATASPQEIRKAYHKLALRLHPDKNKDDEDAKEKFQQLQKVISILGDEEKRAVYDQTGSVDDADLSGDVVDNLRDFFKAMYKKVTEEDIEEFEANYRGSESEKNDLIELYNKFKGKMSRLFCSMLCSNPKLDSHRFKDIIDEAIAAGEVKSTKAYKKWAKEIAEMEPPTNPQKMRRKAAKAADKDLYAVMSQRGDERKEKFDSMFSSLVSRYGSNADSEPNEEEFEAAQRKVESRRSSKKSRKK", "length": 298 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A3Q1NAY5-1", "protein_name": "DnaJ homolog subfamily C member 9", "gene_name": "DNAJC9", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGLLELCEELFGTADLYQVLGVRREASDGEIRRGYHKVSLQVHPDRVGEGDKEDATRRFQILGKVYSVLSDKEQRTLYDEQGTVDEDSDVLSQDRDWEAYWRLLFKKISLEDIQAFEKTYKGSEEELTDIKQAYLDFKGDMDQIMESVLCVQYTEEPRIRHIIQQAIDAGEVPSYNAFVKESKQKMNARKRRAQEEAKEAEMSRKELGLDEGVDNLKVAIQSRQKDRQKEMDNFLAQMEAKYCKPSKRGGKKTTLKKEKK", "length": 260 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8C2LBF6-1", "protein_name": "DnaJ homolog subfamily C member 9", "gene_name": "Dnajc9", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLELCEQVFGTADLYQVLGVRREASEGEVRRGYHKVSLQVHPDRVDEDQKEDATRRFQILGRVYAVLSDKEQRAVYDEQGTVDEESAGLDQDRDWDAYWRLLFKKISLEDIQAFENTYKGSEEELADVKQAYLDFKGDMDQIMESVLCVQYTDEPRIRNIIQQAIDAKEVPSYNAFVKESKQKMNARKRRAQKEAKEAELSRKELGLQEGVNNLKALIQSRQKDRQKEMDNFLAQMEAKYCKPSKGKRTAPKKEKK", "length": 258 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8I5ZVX9-1", "protein_name": "DnaJ homolog subfamily C member 9", "gene_name": "Dnajc9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLLELCEQVFGTADLYQVLGVRREASDGEVRRGYHKVSLQVHPDRVKEDQKEDATRRFQILGRVYAVLSDKEQKAVYDEQGTVDEDSAGLHQDRDWDAYWRLLFKKISLEDIQAFEKTYKGSEEELNDIKQAYLDFKGDMDQIMESVLCVQYTDEPRIRNIIQKAIDAKEVPSYNAFVKESKQKMNARKRRAQEEAKEAELSRKELGLEGGVDSLKALIQSRQKDRQKEMDSFLAQMEAKYCKPSKGGKRAALRKEKK", "length": 259 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1C8S9-1", "protein_name": "DnaJ homolog subfamily C member 9", "gene_name": "DNAJC9", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGLLQDCQAAFGAADLYRALGVRREASPEEIRRAYHRASLRVHPDRAEPDAKEEATRLFQILGKAYAVLSDAEQRAVYDEQGTVDEEGEALRAERDWQEYWRLLFKKITIKDIQDFEKNYKDSEQELADIKSAYMDFEGDMDRIMESVLCVDYTDEPRVKKIIERAIDAGELPSYKAFVKESKQKMTARKRRAEKEAKEAEESRKELGLGDGEDDLKALIQSRNKDRKKEMDDFLAQMEAKYGSNAKKGGKKTAAKKGKK", "length": 260 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q8WXX5-1", "protein_name": "DnaJ homolog subfamily C member 9", "gene_name": "DNAJC9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGLLDLCEEVFGTADLYRVLGVRREASDGEVRRGYHKVSLQVHPDRVGEGDKEDATRRFQILGKVYSVLSDREQRAVYDEQGTVDEDSPVLTQDRDWEAYWRLLFKKISLEDIQAFEKTYKGSEEELADIKQAYLDFKGDMDQIMESVLCVQYTEEPRIRNIIQQAIDAGEVPSYNAFVKESKQKMNARKRRAQEEAKEAEMSRKELGLDEGVDSLKAAIQSRQKDRQKEMDNFLAQMEAKYCKSSKGGGKKSALKKEKK", "length": 260 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q91WN1-1", "protein_name": "DnaJ homolog subfamily C member 9", "gene_name": "Dnajc9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLELCEQVFGTADLYQVLGVRREASDGEVRRGYHKVSLQVHPDRVEEDQKEDATRRFQILGRVYAVLSDKEQKAVYDEQGTVDEDSAGLNQDRDWDAYWRLLFKKISLEDIQAFEKTYKGSEEELNDIKQAYLDFKGDMDQIMESVLCVQYTDEPRIRNIIQKAIESKEIPAYSAFVKESKQKMNARKRRAQEEAKEAELSRKELGLEEGVDNLKALIQSRQKDRQKEMDSFLAQMEAKYCKPSKGGKRTALKKEKK", "length": 259 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VGR7-1", "protein_name": "J domain-containing protein CG6693", "gene_name": "", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSTLELCEKYFGTRDVYKLMELARGAGEKEVKKAYHKLSLLVHPDRVPEEQKAESTEKFKVLSKLYQVLTDTQKRALYDEQGVIDDDDESESKLSSWLELWSKIFKPITEEDINNYEKEYVESELERTDLKKAYLGGKGCINYLMNHVPFMKVEDEPRIQKIVQDMIASGEVPEYKIFTEEPAAKRKKRHQKYAREFKEAKVIKERLKRRQKEKDDQDLADNGGDLQQMILARRNQRESNFGSLMDRLMEKYGNEDDSDTVDFSAFEKKKKKSKKPAAKQETKPKLNGVKAGRVEKGKN", "length": 299 }, "evidence": [ { "id": "F1SU72", "url": "https://omabrowser.org/oma/group/F1SU72/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 7, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "protein folding chaperone complex", "id": "GO:0101031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0101031", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "heat shock protein binding", "id": "GO:0031072", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031072", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "protein-folding chaperone binding", "id": "GO:0051087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051087", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" }, { "name": "histone binding", "id": "GO:0042393", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042393", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "nucleosome assembly", "id": "GO:0006334", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006334", "evidence": [ { "database": "UniProtKB", "id": "F1SU72", "url": "https://www.uniprot.org/uniprotkb/F1SU72" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SU72", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU72" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": 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], "protein_names": [ { "name": "Oncoprotein-induced transcript 3 protein", "type": "recommended", "evidence": [ { "id": "F1SU75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU75/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May be involved in hepatocellular function and development.", "evidence": [ { "database": "UniProtKB", "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75#function" }, { "database": "UniProtKB", "id": "ARBA00056508", "url": "https://www.uniprot.org/uniprotkb/ARBA00056508#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OIT3", "url": "https://www.uniprot.org/uniprotkb/F1SU75", "locus": { "chromosome": "14", "start_pos": 75754331, "end_pos": 75726364, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000010293", "url": "https://www.ensembl.org/id/ENSSSCG00000010293" } ] } } ], "crossref": [ { "id": "ENSSSCG00000010293", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010293", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00054", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513952", "url": "https://www.ncbi.nlm.nih.gov/gene/100513952", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000742", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000742", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001507", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001507", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001881", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001881", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018097", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018097", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042235", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042235", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048290", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048290", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR055355", "url": "https://www.ebi.ac.uk/interpro/entry/IPR055355", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR057774", "url": "https://www.ebi.ac.uk/interpro/entry/IPR057774", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "EFPRHYT", "url": "https://omabrowser.org/oma/group/EFPRHYT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR14002", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14002", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14002:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14002:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36191", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36191", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR36191:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR36191:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00100", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00100", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF14670", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14670", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF23283", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF23283", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1T7W0", "url": "https://www.uniprot.org/uniprotkb/A0A4X1T7W0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1T7W0-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1T7W0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1R9Q1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1R9Q1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8D1R9Q1-1", "url": "https://www.uniprot.org/uniprotkb/A0A8D1R9Q1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU75-1", "url": "https://www.uniprot.org/uniprotkb/F1SU75-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPQFLLLTCLFITITLVSPKALDPCSAYISLNEPWRNTDHQFDESQGSPLCDNSVDGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPREGDGIVQRQACASFNGNCCLWNTTVEVKACPGGYYVYRLTKPSVCFHVYCGHFYDICDEDCHGSCLDTSECTCSPGTVLGPDRQTCFDENECEQNNGGCSEICVNLKNSYRCECGVGRVLRSDGRTCEDIEGCHNNNGGCSHSCLTSEKGYQCECPRGLVLSEDNHTCQVPVFCRSNTIEVSIPRDLVGGLELFLTNTSCRGVSNGTHVNIIFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDIIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNTPLEIMSRSHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFGIEPLVHVNGLESLVESCFATPTSKIDEILKYYLIRDGCVSDDSVKQYTSRDHLAKHFQVPVFKFVGKDHKEVFLHCRVLVCGMLDQRSRCAQGCHRRMRREAVEGEDAAGLQSQMLTGGPISIDWED", "length": 546, "header": "tr|F1SU75-1|F1SU75_PIG Isoform 1 of Oncoprotein-induced transcript 3 protein OS=Sus scrofa OX=9823 GN=OIT3 PE=4 SV=3 CANONICAL=F1SU75-1" }, "isoforms": [ { "isoform_ac": "A0A4X1T7W0-1", "url": "https://www.uniprot.org/uniprotkb/F1SU75/entry#A0A4X1T7W0-1", "sequence": { "sequence": "MPQFLLLTCLFITITLVSPKALDPCSAYISLNEPWRNTDHQFDESQGSPLCDNSVDGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPREGDGIVQRQACASFNGNCCLWNTTVEVKACPGGYYVYRLTKPSVCFHVYCGHFYDICDEDCHGSCLDTSECTCSPGTVLGPDRQTCFDENECEQNNGGCSEICVNLKNSYRCECGVGRVLRSDGRTCEDIEGCHNNNGGCSHSCLTSEKGYQCECPRGLVLSEDNHTCQVPVFCRSNTIEVSIPRDLVGGLELFLTNTSCRGVSNGTHVNIIFSLKTCGTVVDLCFR", "length": 321, "header": "tr|A0A4X1T7W0-1|A0A4X1T7W0_PIG Computationally mapped isoform of Oncoprotein induced transcript 3 OS=Sus scrofa OX=9823 GN=OIT3 PE=4 SV=1 CANONICAL=F1SU75-1" }, "locus": { "chromosome": "14", "start_pos": 75750916, "end_pos": 75726479, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082734.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082734.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073815.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073815.1" } ] } }, { "isoform_ac": "A0A8D1R9Q1-1", "url": "https://www.uniprot.org/uniprotkb/F1SU75/entry#A0A8D1R9Q1-1", "sequence": { "sequence": "MPQFLLLTCLFITITLVSPKALDPCSAYISLNEPWRNTDHQFDESQGSPLCDNSVDGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPREGDGIVQRQACASFNGNCCLWNTTVEVKACPGGYYVYRLTKPSVCFHVYCGHFYDICDEDCHGSCLDTSECTCSPGTVLGPDRQTCFDENECEQNNGGCSEICVNLKNSYRCECGVGRVLRSDGRTCEDIEGCHNNNGGCSHSCLTSEKGYQCECPRGLVLSEDNHTCQVPVFCRSNTIEVSIPRDLVGGLELFLTNTSCRGVSNGTHVNIIFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDIIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNTPLEIMSRSHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFGIEPLVHVNGLESLVESCFATPTSKIDEILKYYLIRDGCVSDDSVKQYTSRDHLAKHFQVPVFKFVGKDHKSVHILQAYD", "length": 498, "header": "tr|A0A8D1R9Q1-1|A0A8D1R9Q1_PIG Computationally mapped isoform of Oncoprotein induced transcript 3 OS=Sus scrofa OX=9823 GN=OIT3 PE=4 SV=1 CANONICAL=F1SU75-1" }, "locus": { "chromosome": "14", "start_pos": 75751114, "end_pos": 75726479, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090988.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090988.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067281.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067281.1" } ] } }, { "isoform_ac": "F1SU75-1", "url": "https://www.uniprot.org/uniprotkb/F1SU75/entry#F1SU75-1", "sequence": { "sequence": "MPQFLLLTCLFITITLVSPKALDPCSAYISLNEPWRNTDHQFDESQGSPLCDNSVDGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPREGDGIVQRQACASFNGNCCLWNTTVEVKACPGGYYVYRLTKPSVCFHVYCGHFYDICDEDCHGSCLDTSECTCSPGTVLGPDRQTCFDENECEQNNGGCSEICVNLKNSYRCECGVGRVLRSDGRTCEDIEGCHNNNGGCSHSCLTSEKGYQCECPRGLVLSEDNHTCQVPVFCRSNTIEVSIPRDLVGGLELFLTNTSCRGVSNGTHVNIIFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDIIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNTPLEIMSRSHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFGIEPLVHVNGLESLVESCFATPTSKIDEILKYYLIRDGCVSDDSVKQYTSRDHLAKHFQVPVFKFVGKDHKEVFLHCRVLVCGMLDQRSRCAQGCHRRMRREAVEGEDAAGLQSQMLTGGPISIDWED", "length": 546, "header": "tr|F1SU75-1|F1SU75_PIG Isoform 1 of Oncoprotein-induced transcript 3 protein OS=Sus scrofa OX=9823 GN=OIT3 PE=4 SV=3 CANONICAL=F1SU75-1" }, "locus": { "chromosome": "14", "start_pos": 75752849, "end_pos": 75726479, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000011266.5", "url": "https://www.ensembl.org/id/ENSSSCT00000011266.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000010974.3", "url": "https://www.ensembl.org/id/ENSSSCP00000010974.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2QN47-1", "protein_name": "Oncoprotein-induced transcript 3 protein", "gene_name": "Oit3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPLSLLLTCLFTTIIPVSPIALDPCSAYISLNEPWRNTDHQFDESQSQPLCDNHMNGEWYRFTGMAGDAMPTFCVPENHCGTHAPVWLNGSHPLESDGIVQRQACASFKGNCCLWNTTVEVKACPGGYYVYRLAKPSVCFHVYCGHFYDICDEDCHGSCADTPECTCSPGTSIGPDGQTCFDENECEQNNGGCSEICVNLKNSHRCVCGVGRVLRSDGKTCEDIEGCHNNNGGCSHSCVGSERGYQCECPRGLVLSDDNHTCQVPVLCKSSAIEVSVPRELVGGLELFLTNNSCRGVSNGTHVNIVFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDIIIRTSELLIPVTCEFPRLYTISEGYVPNLRNAPLEIRSRNHGIFPFTLEIFKDHEFEEPYRENLPTLKLRDSLYFGIEPLVHVSGLESLVESCFATPTAKMDEILKYYLIQDGCVSDDSVKQYSSRDHLAKHFQVPVFKFVGKDHKEVFLHCRVLVCGVLDERSRCAQGCHRRVRREVGDDEDSAGLQDQTLTGGPITIDWED", "length": 546 }, "evidence": [ { "id": "F1SU75", "url": "https://omabrowser.org/oma/group/F1SU75/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AAA9TB88-1", "protein_name": "Oncoprotein-induced transcript 3 protein", "gene_name": "OIT3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPQLLLLACLLIIVTRVAPRALDPCSAYISLNEPWRNTEHQFDESRGSPLCDNSVDGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPLEGDGIVQRQACASFNGNCCLWNTTVEVKSCPGGYYVYRLTKPSVCFHVYCGHFYDICDDDCHGSCLGTSECTCAPGTVLGPDRQTCFDENECEQNNGGCSEICVNLKNSYRCECGIGRVLRSDGKTCEDIEGCHNNNGGCSHSCLTSETGYRCECPRGLVLSEDNHTCQVPVFCKSNTIEVSIPRDLVGGLELFLTNTSCRGVSNGTHVNILFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDIIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNTPLEIMSRSHGIFPFTLEIFKDHEFEEPYREALPTLKLRDSLYFGIEPLVHVNGLESLVESCFATPTSKIDEIMKYYIIQDGCVSDDSVKQYTSRDHLAKHFQVPVFKFVGKDHKEVFLHCRVLVCGMLDERSRCAQGCHRRVRREASTEGEDASGPRSQMLTGGPISIDWED", "length": 547 }, "evidence": [ { "id": "F1SU75", "url": "https://omabrowser.org/oma/group/F1SU75/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q6V0K7-1", "protein_name": "Oncoprotein-induced transcript 3 protein", "gene_name": "Oit3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPLSLLLACLFTTVTLQSPVVLDPCSAYISLNEPWRNTDHQFDESQSQPLCDNHMDGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPLEGDGIVQRQACASFKGNCCLWNTTVEVKACPGGYYVYRLAKPSVCFHIYCGHFYDICDEDCHGSCLDTTECACSPGTSLGPDGQTCFDENECEHNNGGCSEICVNLKNSHRCACGVGRVLRSDGKTCEDIEGCHSNNGGCSHSCLGSEKGYQCECPRGLVLSEDNHTCQVPVLCKSSAIEVSVPRELVGGLELFLTNTSCRGVSNGTHVNIIFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDIIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNAPLEIRSRNHGIFPFTLEIFKDHEFEEPYRETLPTLKLRDSLYFGIEPLVHVSGLESLVESCFATPTAKVDEILKYYLIRDGCVSDDSVKQYSSRDHLAKHFQVPVFKFVGKDHKEVFLHCRVLVCGVLDERSRCAQGCHRRVRREAGEDEDSAGLQSQTLTGGPISIDWEE", "length": 546 }, "evidence": [ { "id": "F1SU75", "url": "https://omabrowser.org/oma/group/F1SU75/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V5-1", "protein_name": "Oncoprotein-induced transcript 3 protein", "gene_name": "Oit3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPLSLLLTCLSTTVTLVSPAVLDPCSAYISLNEPWRNTDHQFDESQNQPLCDNHMNGEWYRFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPLEEDGIVQRQACASFKGNCCLWNATVEVKACPRGYYVYRLARPSVCFHVYCGHFYDICDEDCHGNCLDTTECACSPGTSLGPDGQTCFDENECEHNNGGCSEICVNLKNSHRCACGVGRVLRSDGKTCEDIEGCHNNNGGCSHSCLGSEEGYQCECPRGLVLSEDNHTCQVPVLCKSSAIEVSVPRELVGGLELFLTNTSCRGVSNGTHVNIVFSLKTCGTVVDVVNDKIVASNIVTGLPKETPGSSGDIIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNAPLEIRSRNHGIFPFTLEIFKDHEFEEPYRETLPTLKLRDSLYFGIEPLVHVNGLESLVESCFATPTAKMDEILKYYLIQDGCVSDDSVKQYSSRDHLAKHFQAPVFKFVGKDHKEVFLHCRVLVCGVLDERSRCAQGCHRRVRREVGEDEDSAGLQSQTLTGGPIAIDWED", "length": 546 }, "evidence": [ { "id": "F1SU75", "url": "https://omabrowser.org/oma/group/F1SU75/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WWZ8-1", "protein_name": "Oncoprotein-induced transcript 3 protein", "gene_name": "OIT3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPPFLLLTCLFITGTSVSPVALDPCSAYISLNEPWRNTDHQLDESQGPPLCDNHVNGEWYHFTGMAGDAMPTFCIPENHCGTHAPVWLNGSHPLEGDGIVQRQACASFNGNCCLWNTTVEVKACPGGYYVYRLTKPSVCFHVYCGHFYDICDEDCHGSCSDTSECTCAPGTVLGPDRQTCFDENECEQNNGGCSEICVNLKNSYRCECGVGRVLRSDGKTCEDVEGCHNNNGGCSHSCLGSEKGYQCECPRGLVLSEDNHTCQVPVLCKSNAIEVNIPRELVGGLELFLTNTSCRGVSNGTHVNILFSLKTCGTVVDVVNDKIVASNLVTGLPKQTPGSSGDFIIRTSKLLIPVTCEFPRLYTISEGYVPNLRNSPLEIMSRNHGIFPFTLEIFKDNEFEEPYREALPTLKLRDSLYFGIEPVVHVSGLESLVESCFATPTSKIDEVLKYYLIRDGCVSDDSVKQYTSRDHLAKHFQVPVFKFVGKDHKEVFLHCRVLVCGVLDERSRCAQGCHRRMRRGAGGEDSAGLQGQTLTGGPIRIDWED", "length": 545 }, "evidence": [ { "id": "F1SU75", "url": "https://omabrowser.org/oma/group/F1SU75/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75" } ], "pmid": "" }, { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75" } ], "pmid": "" }, { "name": "cell surface", "id": "GO:0009986", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009986", "evidence": [ { "database": "UniProtKB", "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F1SU75", "url": "https://www.uniprot.org/uniprotkb/F1SU75" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 259, "end_pos": 261, "annotation": "n_glycosylation_sequon" }, { "start_pos": 291, "end_pos": 293, "annotation": "n_glycosylation_sequon" }, { "start_pos": 299, "end_pos": 301, "annotation": "n_glycosylation_sequon" }, { "start_pos": 89, "end_pos": 91, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SU75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU75" }, { "id": "PS51034", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51034" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "ZP", "eco_id": "ECO_0000259", "start_pos": 267, "end_pos": 516, "start_aa": "Phe", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 }, { "start_pos": 259, "end_pos": 261 }, { "start_pos": 291, "end_pos": 293 }, { "start_pos": 299, "end_pos": 301 }, { "start_pos": 89, "end_pos": 91 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU98-1", "uniprot_ac": "F1SU98", "uniprot_id": "F1SU98_PIG", "mass": { "chemical_mass": 34237.0, "monoisotopic_mass": 34237.0 }, "refseq": { "ac": "XP_005671103", "name": "V-type immunoglobulin domain-containing suppressor of T-cell activation isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671103" }, "gene_names": [ { "name": "VSIR", "type": "recommended", "evidence": [ { "id": "F1SU98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU98" } ] }, { "name": "VSIR", "type": "synonym", "evidence": [ { "id": "XP_005671103", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671103" } ] } ], "protein_names": [ { "name": "V-set immunoregulatory receptor", "type": "synonym", "evidence": [ { "id": "F1SU98", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU98/entry#names_and_taxonomy" } ] }, { "name": "V-type immunoglobulin domain-containing suppressor of T-cell activation isoform X2", "type": "synonym", "evidence": [ { "id": "XP_005671103", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671103" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU98", "url": "https://www.uniprot.org/uniprotkb/F1SU98" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "VSIR", "url": "https://www.uniprot.org/uniprotkb/F1SU98", "locus": {} } ], "crossref": [ { "id": "F1SU98", "url": "https://alphafold.ebi.ac.uk/entry/F1SU98", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000010280", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000010280", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100154373", "url": "https://www.ncbi.nlm.nih.gov/gene/100154373", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013106", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013106", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042473", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042473", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "F1SU98", "url": "https://www.orthodb.org/?gene=F1SU98", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44819", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44819", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44819:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44819:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005671103", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005671103", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FCG3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCG3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FCG3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FCG3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU98", "url": "https://www.uniprot.org/uniprotkb/F1SU98", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU98-1", "url": "https://www.uniprot.org/uniprotkb/F1SU98-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVPLVLEAGSRRWGPVLLAFFLAASRGLVAAFKITTPYSLYVCPEGQNVTLTCRLLGPMAKGHDVTFYKTWYRSSRGEVQACSEHRSIRNLSFHDLHLHHSSHLANSSQDLAQRHGLELASDHHGNFTFTMRNLTLLDSGLYCCLMVEIRHHHSEQRLYGAMELQVQRGEEAPSKCIPYPSSSKESESITAAALATSACIVGILCLPLILLLVYKQRQVASNRRAQELVRMDSSNVQGIENPGFENSPPSQGMVEAKPRPPLSYVAQRQPSESGRHLLSEPNTPLSPQGPGDVFFPSLDPVPDSPNSEAV", "length": 311, "header": "tr|F1SU98-1|F1SU98_PIG Isoform 1 of V-set immunoregulatory receptor OS=Sus scrofa OX=9823 GN=VSIR PE=4 SV=4 CANONICAL=F1SU98-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FCG3-1", "url": "https://www.uniprot.org/uniprotkb/F1SU98/entry#A0A8W4FCG3-1", "sequence": { "sequence": "WAEPWCPQWGDRSWGQGKYACDWFLSLSAGLVAAFKITTPYSLYVCPEGQNVTLTCRLLGPMAKGHDVTFYKTWYRSSRGEVQACSEHRSIRNLSFHDLHLHHSSHLANSSQDLAQRHGLELASDHHGNFTFTMRNLTLLDSGLYCCLMVEIRHHHSEQRLYGAMELQVQRGEEAPSKCIPYPSSSKESESITAAALATSACIVGILCLPLILLLVYKQRQVASNRRAQELVRMDSNVQGIENPGFENSPPSQGMVEAKPRPPLSYVAQRQPSESGRHLLSEPNTPLSPQGPGDVFFPSLDPVPDSPNSEAV", "length": 312, "header": "tr|A0A8W4FCG3-1|A0A8W4FCG3_PIG Computationally mapped isoform of V-set immunoregulatory receptor OS=Sus scrofa OX=9823 GN=VSIR PE=4 SV=1 CANONICAL=F1SU98-1" }, "locus": { "chromosome": "14", "start_pos": 74682443, "end_pos": 74668305, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097540.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097540.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077005.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077005.1" } ] } }, { "isoform_ac": "F1SU98-1", "url": "https://www.uniprot.org/uniprotkb/F1SU98/entry#F1SU98-1", "sequence": { "sequence": "MGVPLVLEAGSRRWGPVLLAFFLAASRGLVAAFKITTPYSLYVCPEGQNVTLTCRLLGPMAKGHDVTFYKTWYRSSRGEVQACSEHRSIRNLSFHDLHLHHSSHLANSSQDLAQRHGLELASDHHGNFTFTMRNLTLLDSGLYCCLMVEIRHHHSEQRLYGAMELQVQRGEEAPSKCIPYPSSSKESESITAAALATSACIVGILCLPLILLLVYKQRQVASNRRAQELVRMDSSNVQGIENPGFENSPPSQGMVEAKPRPPLSYVAQRQPSESGRHLLSEPNTPLSPQGPGDVFFPSLDPVPDSPNSEAV", "length": 311, "header": "tr|F1SU98-1|F1SU98_PIG Isoform 1 of V-set 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"MATEVRTQVAEHPLMSPGAELKPENSGCRPRSHGDGGPRKELLIPGIADIELIQEALRTPKAQTPGAYRFGRLSHHSFFSRHHPHPQHVTHIQDLTGKPVCIVRDGFPLGASPQATLLSRYLMGMPAISVPIGDPQSNRDPRLSSETWKKELKDLASRVAIFTKENELKSKEQKEEPQREQGAKYSAETGRLIPASTQAMTRRHSRQGLRSQPRSRDGGIQAFILQDQELLILELLSQILQTDSLNAIQFWLLYAPPKEKDMALGLLQTAVAQLLPQPLVSIPEEKLLNQLQEIQEPSQEQQLPYSQSPKKTKTPPLTKSEKPENIGKAQVLRLHSSPNPAEKGSKAKAEG", "length": 351, "header": "tr|F1SUB4-1|F1SUB4_PIG Isoform 1 of Thymus, brain and testes associated OS=Sus scrofa OX=9823 GN=TBATA PE=4 SV=4 CANONICAL=F1SUB4-1" }, "isoforms": [ { "isoform_ac": "F1SUB4-1", "url": "https://www.uniprot.org/uniprotkb/F1SUB4/entry#F1SUB4-1", "sequence": { "sequence": 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reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUB4", "url": "https://www.uniprot.org/uniprotkb/F1SUB4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], 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"MRVGARAARLPYLQARPLKKNCHWRIMVRPGLSAAAEERRKKLQEYLAAKGKLKCQNTKPYLRAKNNCPTLPPSKSTIRPQKDVTNHDALPAKAARPISSKLQSRPANITESQRPKLEPPKLLGKRLTAGCVSSNPTCKPSRSSQQQHAFRSSTTGELSRKTVQLLNTQELKTTKQQVTDQGIAKYTDSVDNTQVENESSDSCLKEMNKENLPQTLPDSERKPDPELRTLSKPEANQSKRSLVPTKQSLGKRSVNSAVLKERANKQFVGKTQIRIPPVTSQQHCRRADLSRPEGKTPKTVPSHYVQTLNRTQASKKLMAKDIKNMKVNRGKYERPNETKLQSCPMTEQKEKPNKPRTYPSVLQGCNNRHPNIKQDHKPTQACVRPRTSYVLQKSKTVNQRPNLTLGRFNSVVPSTPSIKANGTNGNKYNNSCQQKTWTLDSKSKRALPQNCFLNKTAPRIQAGGTTINGRRVPNGTQPNPNVKKTTAEDRRKQLEEWQKSKGKIYKRPPMELKTKRKIIEEMNISFWKSMEKEEEEKKAQLELSNKINNTLTECLQLIEGGVRSNEISAILSSIPEAEKFAKFWICKAKLLANKGTFDVIGLYEEAIRNGATPIQELREVVLSILQDPNRTTEGITSNSLIAETNRTSIDELAEKTESGKSCLSPKEGEQVTATPQITTSEQAPHPGIKLQIAPIPRMGGMPEVQDMKLITPVRRSARIERAVSRYPEMLQEHDLVVASLNELLEVEETDCFIFRKNEALPVTLGFPTLES", "length": 771, "header": "tr|F1SUB8-1|F1SUB8_PIG Isoform 1 of Cytoskeleton associated protein 2 like OS=Sus scrofa OX=9823 GN=CKAP2L PE=3 SV=3 CANONICAL=F1SUB8-1" }, "isoforms": [ { "isoform_ac": "F1SUB8-1", "url": 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SV=3 CANONICAL=F1SUB8-1" }, "locus": { "chromosome": "3", "start_pos": 43771923, "end_pos": 43750687, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008862.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008862.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008637.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008637.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 415, "start_aa": "Thr", "end_pos": 415, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr415", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUB8", "url": "https://www.uniprot.org/uniprotkb/F1SUB8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100516489", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100516489", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "F1SUB8", "url": "https://www.uniprot.org/uniprotkb/F1SUB8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SUB8", "url": "https://www.uniprot.org/uniprotkb/F1SUB8" } ], "pmid": "" }, { "name": "mitotic spindle", "id": "GO:0072686", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072686", "evidence": [ { "database": "UniProtKB", "id": "F1SUB8", "url": "https://www.uniprot.org/uniprotkb/F1SUB8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 108, "end_pos": 110, "annotation": 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"count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SUC4-1", "uniprot_ac": "F1SUC4", "uniprot_id": "F1SUC4_PIG", "mass": { "chemical_mass": 91226.0, "monoisotopic_mass": 91226.0 }, "refseq": {}, "gene_names": [ { "name": "PTPDC1", "type": "recommended", "evidence": [ { "id": "F1SUC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUC4" } ] } ], "protein_names": [ { "name": "Protein tyrosine phosphatase domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "F1SUC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUC4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May play roles in cilia formation and/or maintenance.", "evidence": [ { "database": "UniProtKB", "id": "F1SUC4", "url": "https://www.uniprot.org/uniprotkb/F1SUC4#function" }, { "database": "UniProtKB", "id": "ARBA00056295", "url": "https://www.uniprot.org/uniprotkb/ARBA00056295#function" }, { "database": "UniProtKB", "id": "I3LKG5", "url": "https://www.uniprot.org/uniprotkb/I3LKG5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SUC4", "url": "https://www.uniprot.org/uniprotkb/F1SUC4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PTPDC1", "url": "https://www.uniprot.org/uniprotkb/F1SUC4", "locus": { "chromosome": "3", "start_pos": 43418784, "end_pos": 43321476, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021704", "url": "https://www.ensembl.org/id/ENSSSCG00000021704" } ] } } ], "crossref": [ { "id": "F1SUC4", "url": "https://alphafold.ebi.ac.uk/entry/F1SUC4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021704", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021704", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd14506", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14506", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100513144", "url": "https://www.ncbi.nlm.nih.gov/gene/100513144", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000340", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000340", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR000387", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000387", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003595", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003595", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016130", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016130", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020422", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020422", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029021", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029021", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049573", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049573", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050561", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050561", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513144", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513144", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LKG5", "url": "https://www.orthodb.org/?gene=I3LKG5", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23339", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23339", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00782", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00782", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SUC4", "url": "https://www.uniprot.org/uniprotkb/F1SUC4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUC4-1", "url": "https://www.uniprot.org/uniprotkb/F1SUC4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKG5", "url": "https://www.uniprot.org/uniprotkb/I3LKG5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LKG5-1", "url": "https://www.uniprot.org/uniprotkb/I3LKG5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLTSQCNFIMEQAGADISSPPALPSWKPSAMQDPPRRLSAVPFLSSFFQGRRHSASDPIVRLQQGRHSSAGKMLSSSSLQVMVAVSSVSCAERNPTYPGKRNSGRPTPKYTKVGERLRHVIPGHMACSMACGGKACKYENAARWSEQEQAIKGVYSSWVTDNILAMARPSTELLEKYCIIEQFQSHGIKSIINLQRPGEHASCGNPLEQKSGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLIPLRNVFSCCDPKAHAVTLGQYLIRQRHLLHGYEARLLKHVPKIIHLICKLLLDLAEDRPVVTEDVVEVPGLSAEIEKTVSEMVTRQLDKELLRHGSDASDSFTPNAVVAEFSNQGVVLSGEQEFDPLWKRRNVECLQPLTRLKRRLSYSDSDLKRAESLLEQGRPPWTGPAQVLPCCNSRQQKPITRCYSPQSPQLDLDKETLLHNAFSLWNQAKFGGLEGLKDDRSSIFHRTDIPKEVQRSRTFSSGVSGSYNPGEPVTPSFANIPKEPNSSHQQVSHCGCETHSGCGSSSVVKDGETCHHPVDCGSSPKAQDSKDLSEVTPHTSLQSELSVEARRMLAAKALADLNEFAEKEEVKKKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWMEQLKEPVITKEDVDMLVDRCADAAEALFLLEKGQQQTVLCVLHCIVGLQTIPADVEEAVLARAIKAFTKVNFDSENGPIVYSTLKKIFKNMLEEKRKMTKDGPKPGI", "length": 819, "header": "tr|F1SUC4-1|F1SUC4_PIG Isoform 1 of Protein tyrosine phosphatase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PTPDC1 PE=3 SV=5 CANONICAL=F1SUC4-1" }, "isoforms": [ { "isoform_ac": "F1SUC4-1", "url": "https://www.uniprot.org/uniprotkb/F1SUC4/entry#F1SUC4-1", "sequence": { "sequence": "MLTSQCNFIMEQAGADISSPPALPSWKPSAMQDPPRRLSAVPFLSSFFQGRRHSASDPIVRLQQGRHSSAGKMLSSSSLQVMVAVSSVSCAERNPTYPGKRNSGRPTPKYTKVGERLRHVIPGHMACSMACGGKACKYENAARWSEQEQAIKGVYSSWVTDNILAMARPSTELLEKYCIIEQFQSHGIKSIINLQRPGEHASCGNPLEQKSGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLIPLRNVFSCCDPKAHAVTLGQYLIRQRHLLHGYEARLLKHVPKIIHLICKLLLDLAEDRPVVTEDVVEVPGLSAEIEKTVSEMVTRQLDKELLRHGSDASDSFTPNAVVAEFSNQGVVLSGEQEFDPLWKRRNVECLQPLTRLKRRLSYSDSDLKRAESLLEQGRPPWTGPAQVLPCCNSRQQKPITRCYSPQSPQLDLDKETLLHNAFSLWNQAKFGGLEGLKDDRSSIFHRTDIPKEVQRSRTFSSGVSGSYNPGEPVTPSFANIPKEPNSSHQQVSHCGCETHSGCGSSSVVKDGETCHHPVDCGSSPKAQDSKDLSEVTPHTSLQSELSVEARRMLAAKALADLNEFAEKEEVKKKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWMEQLKEPVITKEDVDMLVDRCADAAEALFLLEKGQQQTVLCVLHCIVGLQTIPADVEEAVLARAIKAFTKVNFDSENGPIVYSTLKKIFKNMLEEKRKMTKDGPKPGI", "length": 819, "header": "tr|F1SUC4-1|F1SUC4_PIG Isoform 1 of Protein tyrosine phosphatase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PTPDC1 PE=3 SV=5 CANONICAL=F1SUC4-1" }, "locus": { "chromosome": "3", "start_pos": 43416562, "end_pos": 43393043, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008856.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008856.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008631.5", "url": "https://www.ensembl.org/id/ENSSSCP00000008631.5" } ] } }, { "isoform_ac": "I3LKG5-1", "url": "https://www.uniprot.org/uniprotkb/F1SUC4/entry#I3LKG5-1", "sequence": { "sequence": "MAAGVLPQNEQPYSALANNSGYAVNMKGNSGRPTPKYTKVGERLRHVIPGHMACSMACGGKACKYENAARWSEQEQAIKGVYSSWVTDNILAMARPSTELLEKYCIIEQFQSHGIKSIINLQRPGEHASCGNPLEQKSGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMTFALQEGKVAVHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLIPLRNVFSCCDPKAHAVTLGQYLIRQRHLLHGYEARLLKHVPKIIHLICKLLLDLAEDRPVVTEDVVEVPGLSAEIEKTVSEMVTRQLDKELLRHGSDASDSFTPNAVVAEFSNQGVVLSGEQEFDPLWKRRNVECLQPLTRLKRRLSYSDSDLKRAESLLEQGRPPWTGPAQVLPCCNSRQQKPITRCYSPQSPQLDLDKETLLHNAFSLWNQAKFGGLEGLKDDRSSIFHRTDIPKEVQRSRTFSSGVSGSYNPGEPVTPSFANIPKEPNSSHQQVSHCGCETHSGCGSSSVVKDGETCHHPVDCGSSPKAQDSKDLSEVTPHTSLQSELSVEARRMLAAKALADLNEFAEKEEVKKKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWMEQLKEPVITKEDVDMLVDRCADAAEALFLLEKGQQQTVLCVLHCIVGLQTIPADVEEAVLARAIKAFTKVNFDSENGPIVYSTLKKIFKNMLEEKRKMTKDGPKPGI", "length": 746, "header": "tr|I3LKG5-1|I3LKG5_PIG Computationally mapped isoform of Protein tyrosine phosphatase domain-containing protein 1 OS=Sus scrofa OX=9823 GN=PTPDC1 PE=3 SV=2 CANONICAL=F1SUC4-1" }, "locus": { "chromosome": "3", "start_pos": 43416562, "end_pos": 43353923, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028597.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028597.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000024579.2", "url": "https://www.ensembl.org/id/ENSSSCP00000024579.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 578, "start_aa": "Thr", "end_pos": 578, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr578", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUC4", "url": "https://www.uniprot.org/uniprotkb/F1SUC4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513144", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513144", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SUC4", "url": "https://www.uniprot.org/uniprotkb/F1SUC4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "F1SUC4", "url": "https://www.uniprot.org/uniprotkb/F1SUC4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein tyrosine phosphatase activity", "id": "GO:0004725", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004725", "evidence": [ { "database": "UniProtKB", "id": "F1SUC4", "url": "https://www.uniprot.org/uniprotkb/F1SUC4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 589, "end_pos": 591, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SUC4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 819, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SUC4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SUC4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SUC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUC4" }, { "id": "PS50056", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50056" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tyrosine specific protein phosphatases", "eco_id": "ECO_0000259", "start_pos": 241, "end_pos": 308, "start_aa": "Thr", "end_aa": "Leu", "glycosite_overlap": "" }, { 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"https://www.ncbi.nlm.nih.gov/gene/100514399", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR026784", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026784", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514399", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514399", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287AI94", "url": "https://www.orthodb.org/?gene=A0A287AI94", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15976", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15976", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15976:SF14", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15976:SF14", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF27242", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF27242", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287AI94", "url": "https://www.uniprot.org/uniprotkb/A0A287AI94", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AI94-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AI94-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AV10", "url": "https://www.uniprot.org/uniprotkb/A0A287AV10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AV10-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AV10-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUD6", "url": "https://www.uniprot.org/uniprotkb/F1SUD6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUD6-1", "url": "https://www.uniprot.org/uniprotkb/F1SUD6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPHTPLRLLVDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFGGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHVKVAQSIEDHHQEVIGFCRENGFHGLIAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDDKVIRFKRAIGYYSATSKPMAFHPPHYLAARPHPFGMPGMVPPYVPPQMLNIPQTSLHAKPVAPQVPSSGAPGQAPHPYSLAEPALTLETSGKNLTEQNYSNIPHEGKHTPLYERSSPINPAPSGSPNHVDAAYFPGSSTSSSSDNDEGSGGAANHISGNKIGWEKTGSHSEPQARGDPGDQTKAEGSSTASSGSQLAEGKGSQIGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEASKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKRLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPASVPTHLTVLCCVLRYMVQWPGARILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPVPWEHCCPWMYFDGKLFQSKLLKASREKTPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQSHPLPFPPPAALPFYPASVYPRHFGPVPPAQGRGRGFAGVCSFGGPCGETVATGAYRAFRVTTAAGPCGAFSGSDSGRTSKSQGGIQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKNQGAIQGKPPYAASAEEVAKELKSRSGESKSSAVSSDGSLAENGAVAEEKPAPQMNGSTGDARAPSHSESALNNDSKTCNTNPHLNALSTDSACRRADALEAAVLKKEE", "length": 1115, "header": "tr|F1SUD6-1|F1SUD6_PIG Isoform 1 of Family with sequence similarity 120 member A OS=Sus scrofa OX=9823 GN=FAM120A PE=1 SV=3 CANONICAL=F1SUD6-1" }, "isoforms": [ { "isoform_ac": "A0A287AI94-1", "url": "https://www.uniprot.org/uniprotkb/F1SUD6/entry#A0A287AI94-1", "sequence": { "sequence": 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"length": 1163, "header": "tr|A0A287AI94-1|A0A287AI94_PIG Computationally mapped isoform of Family with sequence similarity 120 member A OS=Sus scrofa OX=9823 GN=FAM120A PE=1 SV=1 CANONICAL=F1SUD6-1" }, "locus": { "chromosome": "3", "start_pos": 42973261, "end_pos": 42861658, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044353.2", "url": "https://www.ensembl.org/id/ENSSSCT00000044353.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043717.1", "url": "https://www.ensembl.org/id/ENSSSCP00000043717.1" } ] } }, { "isoform_ac": "A0A287AV10-1", "url": "https://www.uniprot.org/uniprotkb/F1SUD6/entry#A0A287AV10-1", "sequence": { "sequence": "MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPHTPLRLLVDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFGGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHVKVAQSIEDHHQEVIGFCRENGFHGLIAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKGRVWQMSPGRRESGSRRRISGFPHTRRWTEELSGSHGTVHTSPAFPRSRVRAHQLVLPPCDVVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDDKVIRFKRAIGYYSATSKPMAFHPPHYLARPHPFGMPGMVPPYVPPQMLNIPQTSLHAKPVAPQVPSSGAPGQAPHPYSLAEPALTLETSGKNLTEQNYSNIPHEGKHTPLYERSSPINPAPSGSPNHVDAAYFPGSSTSSSSDNDEGSGGAANHISGNKIGWEKTGSHSEPQARGDPGDQTKAEGSSTASSGSQLAEGKGSQIGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEASKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKRLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPASVPTHLTVLCCVLRYMVQWPGARILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPVPWEHCCPWMYFDGKLFQSKLLKASREKTPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQSHPLPFPPPAALPFYPASVYPRHFGPVPPAQGRGRGFAGIQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKNQGAIQGKPPYAASAEEVAKELKSRSGESKSSAVSSDGSLAENGAVAEEKPAPQMNGSTGDARAPSHSESALNNDSKTCNTNPHLNALSTDSACRRADALEAAVLKKEE", "length": 1117, "header": "tr|A0A287AV10-1|A0A287AV10_PIG Computationally mapped isoform of Family with sequence similarity 120 member A OS=Sus scrofa OX=9823 GN=FAM120A PE=1 SV=1 CANONICAL=F1SUD6-1" }, "locus": { "chromosome": "3", "start_pos": 42973261, "end_pos": 42861658, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062724.2", "url": "https://www.ensembl.org/id/ENSSSCT00000062724.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047773.1", "url": "https://www.ensembl.org/id/ENSSSCP00000047773.1" } ] } }, { "isoform_ac": "F1SUD6-1", "url": "https://www.uniprot.org/uniprotkb/F1SUD6/entry#F1SUD6-1", "sequence": { "sequence": "MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPHTPLRLLVDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFGGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHVKVAQSIEDHHQEVIGFCRENGFHGLIAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDDKVIRFKRAIGYYSATSKPMAFHPPHYLAARPHPFGMPGMVPPYVPPQMLNIPQTSLHAKPVAPQVPSSGAPGQAPHPYSLAEPALTLETSGKNLTEQNYSNIPHEGKHTPLYERSSPINPAPSGSPNHVDAAYFPGSSTSSSSDNDEGSGGAANHISGNKIGWEKTGSHSEPQARGDPGDQTKAEGSSTASSGSQLAEGKGSQIGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEASKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKRLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPASVPTHLTVLCCVLRYMVQWPGARILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPVPWEHCCPWMYFDGKLFQSKLLKASREKTPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQSHPLPFPPPAALPFYPASVYPRHFGPVPPAQGRGRGFAGVCSFGGPCGETVATGAYRAFRVTTAAGPCGAFSGSDSGRTSKSQGGIQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKNQGAIQGKPPYAASAEEVAKELKSRSGESKSSAVSSDGSLAENGAVAEEKPAPQMNGSTGDARAPSHSESALNNDSKTCNTNPHLNALSTDSACRRADALEAAVLKKEE", "length": 1115, "header": "tr|F1SUD6-1|F1SUD6_PIG Isoform 1 of Family with sequence similarity 120 member A OS=Sus scrofa OX=9823 GN=FAM120A PE=1 SV=3 CANONICAL=F1SUD6-1" }, "locus": { "chromosome": "3", "start_pos": 42973261, "end_pos": 42861658, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008852.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008852.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008628.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008628.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUD6", "url": "https://www.uniprot.org/uniprotkb/F1SUD6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514399", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514399", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SUD6", "url": "https://www.uniprot.org/uniprotkb/F1SUD6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SUD6", "url": "https://www.uniprot.org/uniprotkb/F1SUD6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1062, "end_pos": 1064, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1080, "end_pos": 1082, "annotation": "n_glycosylation_sequon" }, { "start_pos": 409, "end_pos": 411, "annotation": "n_glycosylation_sequon" }, { "start_pos": 414, "end_pos": 416, "annotation": "n_glycosylation_sequon" }, { "start_pos": 844, "end_pos": 846, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SUD6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1115, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SUD6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SUD6" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1062, "end_pos": 1064 }, { "start_pos": 1080, "end_pos": 1082 }, { "start_pos": 409, "end_pos": 411 }, { "start_pos": 414, "end_pos": 416 }, { "start_pos": 844, "end_pos": 846 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SUE2-1", "uniprot_ac": "F1SUE2", "uniprot_id": "F1SUE2_PIG", "mass": { "chemical_mass": 49308.0, "monoisotopic_mass": 49308.0 }, "refseq": { "ac": "XP_003124829", "name": "osteomodulin", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124829" }, "gene_names": [ { "name": "OMD", "type": "recommended", "evidence": [ { "id": "F1SUE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUE2" } ] }, { "name": "OMD", "type": "synonym", "evidence": [ { "id": "XP_003124829", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124829" } ] } ], "protein_names": [ { "name": "Osteomodulin", "type": "recommended", "evidence": [ { "id": "F1SUE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUE2/entry#names_and_taxonomy" } ] }, { "name": "Keratan sulfate proteoglycan osteomodulin", "type": "synonym", "evidence": [ { "id": "F1SUE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUE2/entry#names_and_taxonomy" } ] }, { "name": "Osteoadherin", "type": "synonym", "evidence": [ { "id": "F1SUE2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUE2/entry#names_and_taxonomy" } ] }, { "name": "osteomodulin", "type": "synonym", "evidence": [ { "id": "XP_003124829", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124829" } ] } ], "function": [ { "annotation": "May be implicated in biomineralization processes. Has a function in binding of osteoblasts via the alpha(V)beta(3)-integrin.", "evidence": [ { "database": "UniProtKB", "id": "F1SUE2", "url": "https://www.uniprot.org/uniprotkb/F1SUE2#function" }, { "database": "UniProtKB", "id": "ARBA00060161", "url": "https://www.uniprot.org/uniprotkb/ARBA00060161#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SUE2", "url": "https://www.uniprot.org/uniprotkb/F1SUE2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "OMD", "url": "https://www.uniprot.org/uniprotkb/F1SUE2", "locus": { "chromosome": "3", "start_pos": 42142658, "end_pos": 42154583, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008073", "url": "https://www.ensembl.org/id/ENSSSCG00000008073" } ] } } ], "crossref": [ { "id": "ENSSSCG00000008073", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008073", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511925", "url": "https://www.ncbi.nlm.nih.gov/gene/100511925", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000372", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000372", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050333", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050333", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511925", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511925", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HYHHLTY", "url": "https://omabrowser.org/oma/group/HYHHLTY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SUE2", "url": "https://www.orthodb.org/?gene=F1SUE2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45712", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45712", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45712:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45712:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01462", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01462", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2022854", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022854", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2022857", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022857", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003124829", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003124829", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SUE2", "url": "https://www.uniprot.org/uniprotkb/F1SUE2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUE2-1", "url": "https://www.uniprot.org/uniprotkb/F1SUE2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGFSSPVCVLLFFLGVKVYCQYESYQWDEDYDQEPDDVYQPEFQFRQNVDYRVPFPQHTLGCPSECFCPPNFPSSMYCDNRKLKTIPNIPPYIQQVYLQFNEIEAVTADSFINATHLKEINLSHNKIKSQKMDHGVFAKLSNLLQLHLHHNNLEEFPFPLPKSLERILLGYNEISRLQTNAMDGLVNLTMLDLCYNQIDDSMLQEKILGKMEKLMQLNLCNNRLESMPPGLPSSLMYLSLENNSISSIPENYFNELPKLHALRMSHNKLQDIPCNIFNLSNLVELNVGHNKLKQAFYIPRNLEHLYLENNEIENINVTVMCPSVNPLHYHHLTYIRLDQNKLKEPISSYILLCFPHIHTIYYGEQRSTNGQTIQLKTQVFRRFQDDADSEDHDDHQEGPEEEGSEEHVDPHYYGGQEWQETI", "length": 422, "header": "tr|F1SUE2-1|F1SUE2_PIG Isoform 1 of Osteomodulin OS=Sus scrofa OX=9823 GN=OMD PE=1 SV=1 CANONICAL=F1SUE2-1" }, "isoforms": [ { "isoform_ac": "F1SUE2-1", "url": "https://www.uniprot.org/uniprotkb/F1SUE2/entry#F1SUE2-1", "sequence": { "sequence": "MGFSSPVCVLLFFLGVKVYCQYESYQWDEDYDQEPDDVYQPEFQFRQNVDYRVPFPQHTLGCPSECFCPPNFPSSMYCDNRKLKTIPNIPPYIQQVYLQFNEIEAVTADSFINATHLKEINLSHNKIKSQKMDHGVFAKLSNLLQLHLHHNNLEEFPFPLPKSLERILLGYNEISRLQTNAMDGLVNLTMLDLCYNQIDDSMLQEKILGKMEKLMQLNLCNNRLESMPPGLPSSLMYLSLENNSISSIPENYFNELPKLHALRMSHNKLQDIPCNIFNLSNLVELNVGHNKLKQAFYIPRNLEHLYLENNEIENINVTVMCPSVNPLHYHHLTYIRLDQNKLKEPISSYILLCFPHIHTIYYGEQRSTNGQTIQLKTQVFRRFQDDADSEDHDDHQEGPEEEGSEEHVDPHYYGGQEWQETI", "length": 422, "header": "tr|F1SUE2-1|F1SUE2_PIG Isoform 1 of Osteomodulin OS=Sus scrofa OX=9823 GN=OMD PE=1 SV=1 CANONICAL=F1SUE2-1" }, "locus": { "chromosome": "3", "start_pos": 42148418, "end_pos": 42146597, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008846.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008846.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008622.2", "url": "https://www.ensembl.org/id/ENSSSCP00000008622.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUE2", "url": "https://www.uniprot.org/uniprotkb/F1SUE2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511925", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511925", "resource": "KEGG Pathway" }, { "id": "R-SSC-2022854", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022854", "resource": "Reactome", "description": "Keratan sulfate biosynthesis" }, { "id": "R-SSC-2022857", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022857", "resource": "Reactome", "description": "Keratan sulfate degradation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1AAG8-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGILSQLSILYLLWTTTVFCQYEDYDFGDEYDEPDHQQPYYSNSNPSAQAEVPHFPFPVECARECFCPPEFPLSMYCDHRKLKTIPNIPAHVQQLYLQNNDIEAVPAGPFTNVTILREINLSYNKIKFHMIDHGVFAKLSNLVQLHLHHNELDEFPFPLPSSLERLLLGFNKISKLPGIALDGLANITMLDLCSNFLDDSVLKGNPFSAMNNLMQLNLCNNKLQTMPPNLPSSLMYLSLENNSISYIPENYFSKLPKIIALRMSHNNLQNIPRNTFISLPNLIELNLGHNKLKQVFYIPRSLQHLYIEDNDIEMINVTLMCPSIDLMNINQLTYIRVDQNKLTTPISTYAFFCFPHIRTIYYGEQNSNANKSTQIRAPVFRRLLTPEEYDEIEDDHEIHDQETEEEHEAENNYFYPHFW", "length": 419 }, "evidence": [ { "id": "F1SUE2", "url": "https://omabrowser.org/oma/group/F1SUE2/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9SYU0-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFSSLVCVLFFFLGVKVYCQYESYQWDEDYDQEPDDVYQTEFQFQQNINYEAPFHQHTLGCASECFCPPNFPSSMYCDNRKLKTIPNIPAHIQQVYLQFNEIEAVTADSFINATHLKEINLSHNKIKSQKIDHGVFAKLPNLLQLHLQHNNLEDFPFPLPKSLERIFLGYNEISRLQTNAVNGLVNLTMLDLCFNKIDDSVLQEKVLAKMEKLMQLNLCNNRLESMPPGLPSSLMYLSLENNSISSIPENYFNKLPKLHALRISHNKLQDIPYNIFNLSNLIELNVGHNKLKQAFYIPRNLEHLYLENNEIENVNVTVMCPSVDPLHYHHLTHIRIDQNKLKAPISSYIFLCFPHIHTIYYGEQQSTNGQTIQLKTQVFRRFQDDGDSEDHDDHHEGPEEEGTEENIDAHYYGSQEWQETI", "length": 422 }, "evidence": [ { "id": "F1SUE2", "url": "https://omabrowser.org/oma/group/F1SUE2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "F6NL91-1", "protein_name": "Osteomodulin", "gene_name": "omd", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLAQLLTILCLFLLTGVLVFSQDYEETNYSDYDTDAISLPEAPPLSVTQQPDYDSQLIYSYDCARECFCPSSYPFAMYCDHQKLKEVPNIPRHIRHLYIQHNDIEEITSKPFINATSLREINLSYNKLQSSKVDKDVFKRLKDLTQLHLEHNNLEDIPSPLPKTLKRLHLGFNKISKIAADATRELTKLTVLDLGSNRLTDASIKGKILSGMKSLMQIILCNNKLKSMPADLPESIQQISLENNSIVSIPEGYFKKTPNLVSLRMPHNKLKSVAYNAFNLSKLMELHLGHNQLSKPFFVPRNLEHLYLNHNDFKDLNISLMCPSLDLGHPNMLTYIRLDNNKLSGPVDYYAYRCFPRLIMIFYGHQRKDDEDDSEKSPKKYEKPDRPKKPGGSKAIDTEV", "length": 401 }, "evidence": [ { "id": "F1SUE2", "url": "https://omabrowser.org/oma/group/F1SUE2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O35103-1", "protein_name": "Osteomodulin", "gene_name": "Omd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGFLSPIYVLFFCFGVRVYCQYEAYRWDDDYDQEPNEDYDPEFQFHQNIEYGVPFYNNILGCAKECFCPTNFPTSMYCDNRKLKTIPIIPMHIQQLNLQFNDIEAVTANSFINATHLKEINLSHNKIKSQKIDYGVFAKLSNLQQLHLEHNNLEEFPFPLPKSLERLLLGYNEISILPTNAMDGLVNVTMLDLCYNHLSDSMLKEKTLSKMEKLMQLNLCNNRLESMPLGLPSSLMYLSLENNSISSIPDNYFDKLPKLHALRISHNKLEDIPYDIFNLSNLIELNVGHNKLKQAFYIPRNLEHLYLQNNEIESINVTMICPSPDPVHHHHLTYLRVDQNKLKEPISSYIFFCFPRIHSIYYGEQRSTNGETIQLKTQVFRSYQEEEEEDDHDSQDNTLEGQEVSDEHYNSHYYEMQEWQDTI", "length": 423 }, "evidence": [ { "id": "F1SUE2", "url": "https://omabrowser.org/oma/group/F1SUE2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q99983-1", "protein_name": "Osteomodulin", "gene_name": "OMD", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFLSPIYVIFFFFGVKVHCQYETYQWDEDYDQEPDDDYQTGFPFRQNVDYGVPFHQYTLGCVSECFCPTNFPSSMYCDNRKLKTIPNIPMHIQQLYLQFNEIEAVTANSFINATHLKEINLSHNKIKSQKIDYGVFAKLPNLLQLHLEHNNLEEFPFPLPKSLERLLLGYNEISKLQTNAMDGLVNLTMLDLCYNYLHDSLLKDKIFAKMEKLMQLNLCSNRLESMPPGLPSSLMYLSLENNSISSIPEKYFDKLPKLHTLRMSHNKLQDIPYNIFNLPNIVELSVGHNKLKQAFYIPRNLEHLYLQNNEIEKMNLTVMCPSIDPLHYHHLTYIRVDQNKLKEPISSYIFFCFPHIHTIYYGEQRSTNGQTIQLKTQVFRRFPDDDDESEDHDDPDNAHESPEQEGAEGHFDLHYYENQE", "length": 421 }, "evidence": [ { "id": "F1SUE2", "url": "https://omabrowser.org/oma/group/F1SUE2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1S7-1", "protein_name": "Osteomodulin", "gene_name": "Omd", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RCC2", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8", "locus": { "chromosome": "6", "start_pos": 75988272, "end_pos": 76014160, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003485", "url": "https://www.ensembl.org/id/ENSSSCG00000003485" } ] } } ], "crossref": [ { "id": "F1SUQ8", "url": "https://alphafold.ebi.ac.uk/entry/F1SUQ8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003485", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003485", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100525466", "url": "https://www.ncbi.nlm.nih.gov/gene/100525466", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000408", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000408", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009091", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009091", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028641", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028641", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058923", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058923", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525466", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525466", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "GKWKNTG", "url": "https://omabrowser.org/oma/group/GKWKNTG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SUQ8", "url": "https://www.orthodb.org/?gene=F1SUQ8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46207", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46207", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46207:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46207:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF25390", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25390", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-141430", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-141444", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141444", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2467813", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467813", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2500257", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2500257", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5663220", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663220", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-68877", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68877", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9648025", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648025", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020951088", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951088", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287ANK4", "url": "https://www.uniprot.org/uniprotkb/A0A287ANK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287ANK4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287ANK4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJ22", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ22", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BJ22-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BJ22-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUQ8-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPRKKAAAAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKRAARPATTKAGGAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLLEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVREVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVIARDESETEKEKIKKLPEYNPRTL", "length": 520, "header": "tr|F1SUQ8-1|F1SUQ8_PIG Isoform 1 of Protein RCC2 OS=Sus scrofa OX=9823 GN=RCC2 PE=1 SV=2 CANONICAL=F1SUQ8-1" }, "isoforms": [ { "isoform_ac": "A0A287ANK4-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8/entry#A0A287ANK4-1", "sequence": { "sequence": "MPRKKAAAAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKRAARPATTKAGGAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLLEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVREVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGCVSGMSVLPPSRVRWTHLGPPCRGVGPGFQSQEGQEGCAHLAMASAESHLECSRPGVCALASGSELLLVRRESVTATRGEEGSVPSQFSVCLGDACGAVWHFPVRSLLIQTTCQVVRE", "length": 554, "header": "tr|A0A287ANK4-1|A0A287ANK4_PIG Computationally mapped isoform of Regulator of chromosome condensation 2 OS=Sus scrofa OX=9823 GN=RCC2 PE=1 SV=1 CANONICAL=F1SUQ8-1" }, "locus": { "chromosome": "6", "start_pos": 76012937, "end_pos": 75992996, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055222.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055222.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000045469.1", "url": "https://www.ensembl.org/id/ENSSSCP00000045469.1" } ] } }, { "isoform_ac": "A0A287BJ22-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8/entry#A0A287BJ22-1", "sequence": { "sequence": "MPRKKAAAAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKRAARPATTKAGGAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLLEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVREVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELVSWSLPGRGRGRTRPGLPEPLPENTQKESGHGGWWFPCLLRVRSISPDVWAPPAVSYSLPIM", "length": 522, "header": "tr|A0A287BJ22-1|A0A287BJ22_PIG Computationally mapped isoform of Regulator of chromosome condensation 2 OS=Sus scrofa OX=9823 GN=RCC2 PE=1 SV=1 CANONICAL=F1SUQ8-1" }, "locus": { "chromosome": "6", "start_pos": 76012937, "end_pos": 75992311, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045709.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045709.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056151.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056151.1" } ] } }, { "isoform_ac": "F1SUQ8-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8/entry#F1SUQ8-1", "sequence": { "sequence": "MPRKKAAAAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKRAARPATTKAGGAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLLEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVREVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVIARDESETEKEKIKKLPEYNPRTL", "length": 520, "header": "tr|F1SUQ8-1|F1SUQ8_PIG Isoform 1 of Protein RCC2 OS=Sus scrofa OX=9823 GN=RCC2 PE=1 SV=2 CANONICAL=F1SUQ8-1" }, "locus": { "chromosome": "6", "start_pos": 76012937, "end_pos": 75990597, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046280.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046280.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000031892.1", "url": "https://www.ensembl.org/id/ENSSSCP00000031892.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525466", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525466", "resource": "KEGG Pathway" }, { "id": "R-SSC-141430", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141430", "resource": "Reactome", "description": "Inactivation of APC/C via direct inhibition of the APC/C complex" }, { "id": "R-SSC-141444", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-141444", "resource": "Reactome", "description": "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" }, { "id": "R-SSC-2467813", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2467813", "resource": "Reactome", "description": "Separation of Sister Chromatids" }, { "id": "R-SSC-2500257", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2500257", "resource": "Reactome", "description": "Resolution of Sister Chromatid Cohesion" }, { "id": "R-SSC-5663220", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663220", "resource": "Reactome", "description": "RHO GTPases Activate Formins" }, { "id": "R-SSC-68877", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-68877", "resource": "Reactome", "description": "Mitotic Prometaphase" }, { "id": "R-SSC-9648025", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9648025", "resource": "Reactome", "description": "EML4 and NUDC in mitotic spindle formation" } ], "orthologs": [ { "uniprot_canonical_ac": "F1LVV4-1", "protein_name": "Protein RCC2", "gene_name": "Rcc2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRKKGAAWEEPSSGNGTARAGPRRRGGPAGRKRERPERCSSSSGGGSSGDEDGPELDGAPGGGKRTARPATAGKASGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKERLQRLPEYTPRTL", "length": 520 }, "evidence": [ { "id": "F1SUQ8", "url": "https://omabrowser.org/oma/group/F1SUQ8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F4HQZ1-1", "protein_name": "Regulator of chromosome condensation (RCC1) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAEAMNSSEKKDESSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQLEVYDGKGSLEESVEEVKEETLAPKQQAVTKRGASKKRKASKASSDSEQDSDEDNSDKEKEVQGSDADSDYSEDGEEANGKKQSARGRGRGRGARGRGGRTSNGKAPPVKTGGRRGRPRKS", "length": 538 }, "evidence": [ { "id": "F1SUQ8", "url": "https://omabrowser.org/oma/group/F1SUQ8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q6NYE2-1", "protein_name": "Protein RCC2 homolog", "gene_name": "rcc2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPRKKVTDVSGNGGLKRKRGGGKKKEREFSSDDEFDDYEQENTKKPGKPAAKAGLQPVTVADDVKEKIKLEVPKVKGQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQDTEQEKEKLKKLPEYNPRTL", "length": 495 }, "evidence": [ { "id": "F1SUQ8", "url": "https://omabrowser.org/oma/group/F1SUQ8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q8BK67-1", "protein_name": "Protein RCC2", "gene_name": "Rcc2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRKKGAAWEEPSSGNGTARAGPRRRGGPAGRKRERPERCSSSSGGGSSGDEDGPELDGAPGGGKRTARPATAGKAAGAAAIITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKEKLQRLPEYTPRTL", "length": 520 }, "evidence": [ { "id": "F1SUQ8", "url": "https://omabrowser.org/oma/group/F1SUQ8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P258-1", "protein_name": "Protein RCC2", "gene_name": "RCC2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPRKKAAAAAWEEPSSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKRAARPATAGKAGGAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKLPEYNPRTL", "length": 522 }, "evidence": [ { "id": "F1SUQ8", "url": "https://omabrowser.org/oma/group/F1SUQ8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VMI5-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG9135", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSAKRKAGGNGAGPNKRRPKKKESDYEDEFSDESDDDGVQQQAAAANQMEVLIPHDDLDPPSKLPEDLLATLEKTPGQMLIAGMVTWDLTGKRDRKNVTKVRPNLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTHEATKQKYEKMPEYTIDD", "length": 487 }, "evidence": [ { "id": "F1SUQ8", "url": "https://omabrowser.org/oma/group/F1SUQ8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 10, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { 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"https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { "name": "early endosome membrane", "id": "GO:0031901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031901", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { "name": "chromosome, centromeric core domain", "id": "GO:0034506", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034506", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { "name": "mitotic spindle midzone", "id": "GO:1990023", "url": 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"id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "small GTPase binding", "id": "GO:0031267", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031267", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { "name": "microtubule binding", "id": "GO:0008017", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008017", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { "name": "protein kinase binding", "id": "GO:0019901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019901", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ8", "url": "https://www.uniprot.org/uniprotkb/F1SUQ8" } ], "pmid": "" }, { "name": "protein domain specific binding", "id": "GO:0019904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019904", "evidence": [ { 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SUR7-1", "uniprot_ac": "F1SUR7", "uniprot_id": "F1SUR7_PIG", "mass": { "chemical_mass": 36072.0, "monoisotopic_mass": 36072.0 }, "refseq": {}, "gene_names": [ { "name": "DNAJB13", "type": "recommended", "evidence": [ { "id": "F1SUR7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUR7" } ] } ], "protein_names": [ { "name": "DnaJ homolog subfamily B member 13", "type": "recommended", "evidence": [ { "id": "F1SUR7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUR7/entry#names_and_taxonomy" } ] }, { "name": "Testis and spermatogenesis cell-related protein 6", "type": "synonym", "evidence": [ { "id": "F1SUR7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUR7/entry#names_and_taxonomy" } ] }, { "name": "Testis spermatocyte apoptosis-related gene 6 protein", 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"MGQDYYAVLQITRNSEDAQIKNAYRKLALKNHPLRSIEPSSAETFRQIAEAYDVLSDPVKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGNPEKVFHEFFGGDNPFNEFFDAEGNEVDLNFGGLRGRGVKKQDPPIERDLYLSLEDLFFGCTKKIKISRRVLNEDGFSSTIKDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDDLFFVNAIPLGKALTCCTVEVKTLDDRLLNIPINDIVHPKYFKKVPGEGMPLPEEPARKGDLFIFFDIQFPTRLTPQKKQMLRQALLT", "length": 316, "header": "tr|F1SUR7-1|F1SUR7_PIG Isoform 1 of DnaJ homolog subfamily B member 13 OS=Sus scrofa OX=9823 GN=DNAJB13 PE=4 SV=1 CANONICAL=F1SUR7-1" }, "locus": { "chromosome": "9", "start_pos": 8355240, "end_pos": 8342522, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016184.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016184.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015751.2", "url": "https://www.ensembl.org/id/ENSSSCP00000015751.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUR7", "url": "https://www.uniprot.org/uniprotkb/F1SUR7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7FLR1-1", "protein_name": "DnaJ homolog subfamily B member 13 isoform X1", "gene_name": "Dnajb13", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGVDYYAVLQVTRNSEDAQIKKAYRKLALKNHPLKSNEPSAPEIFKQIAEAYDVLSDQTSRQQVARAILAHHRPELSDCPPASPVTHTPDPSSRSHVSTAVKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGNPDKVFHEFFGGDNPFSEFFDAEGNDIDLNFGGLRGRGVQKQDPPIERDLYLSLEDLFFGCTKKIKISRRVLNEDKYSSTIKDKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFVVKEKLHPRFRRERDNLLFVYPIPLGKALTCCTVEVRTLDDRLLNIPINDIVHWKKEKTESLDNQSLSWSPSLERDPKRRKEGMNLERENTSHGGGTSSSCFYHRPSNPPHGLSQRKLTGPGEEPHSCVPKSKTPEYLAH", "length": 395 }, "evidence": [ { "id": "F1SUR7", "url": "https://omabrowser.org/oma/group/F1SUR7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1C599-1", "protein_name": "DnaJ homolog subfamily B member 13", "gene_name": "DNAJB13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGQDYYAVLELGRNATDADIKKAYRLLALENHPQKCKEPLAQERFRLLAEAYDVLSDPVRRGIYDRFGEEGLKGGIPVGSDGEDAWTAGYVFHNNPDKVFKEFFGGHNPFAEFFTKDGLEVTLPFGGLHGRGVMKQDPPMVWDLHVSLEDLFFGCTKKMKISHRVMNEDGQTSTIRDKILIIDVQPGWKQGTRVTFEKEGDQGPNIIPSDITFVVQEKPHPRFKRTNDDLIYVASIPLGKALIGCTVDVRTLDGRLLSIPINDIVHPTYCKVVPGEGMPLLEDPRRRGDLLIHFNICFPKRLTPDKKVLLRRALLS", "length": 316 }, "evidence": [ { "id": "F1SUR7", "url": "https://omabrowser.org/oma/group/F1SUR7/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F4JY55-1", "protein_name": "DNAJ heat shock family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGLDYYDILKVNRNATEDDLKKSYRKLAMKWHPDKNPNTKTEAEAKFKQISEAYEAKYEVMFQVLSDPQKRAVYDQYGEEGLSDMPPPGSTGNNGRAGGFNPRNAEDIFAEFFGSSPFGFGSAGGPGRSMRFQSDGGGGMFGGFGGGNNGSENNIFRTYSEGTPAPKKPPPVESKLPCSLEELYSGSTRKMKISRSIVDANGRQAQETEILTIVVKPGWKKGTKIKFPDKGNEQVNQLPADLVFVIDEKPHDLFTRDGNDLITSRRVTLAEAIGGTTVNINTLDGRNLPVGVAEIVSPGYEFVVPGEGMPIAKEPRNKGDLKIKFDVQFPARLTTEQKSALKRVLAG", "length": 347 }, "evidence": [ { "id": "F1SUR7", "url": "https://omabrowser.org/oma/group/F1SUR7/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P59910-1", "protein_name": "DnaJ homolog subfamily B member 13", "gene_name": "DNAJB13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLKSNEPSSAEIFRQIAEAYDVLSDPMKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGKPEKVFHEFFGGNNPFSEFFDAEGSEVDLNFGGLQGRGVKKQDPQVERDLYLSLEDLFFGCTKKIKISRRVLNEDGYSSTIKDKILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDRLLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQALLT", "length": 316 }, "evidence": [ { "id": "F1SUR7", "url": "https://omabrowser.org/oma/group/F1SUR7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q80Y75-1", "protein_name": "DnaJ homolog subfamily B member 13", "gene_name": "Dnajb13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLDYYAVLQVTRNSEDAQIKKAYRKLALKNHPLKSSEPGAPEIFKQIAEAYDVLSDPVKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGNPDKVFHEFFGGDNPFSEFFDAEGNDIDLNFGGLWGRGVQKQDPPIERDLYLSLEDLFFGCTKKIKISRRVLNEDRYSSTIKDKILTIDVRPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDRLLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQALLT", 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"url": "https://www.uniprot.org/uniprotkb/F1SUS0/entry#A0A5G2QNS3-1", "sequence": { "sequence": "MRAASLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIGKRPACHQAFFSPTLPRCAQLSQGWGEVGPWEPQGGVPRAGGLPDPPVHIHLSFQTTRTTMIIKVKGWGQDRWTGSWVESPCRAGGGGMGRREQTPLSSPVAEVTPRPPEEQFQFQSQQQVQQEVIPAPTLEPGHVETEPTEPGPLDCREEQYPCTRLYSIHKPCKQCLNEVCFYSLRRVYVVNKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCGGC", "length": 276, "header": "tr|A0A5G2QNS3-1|A0A5G2QNS3_PIG Computationally mapped isoform of Microfibril associated protein 2 OS=Sus scrofa OX=9823 GN=MFAP2 PE=1 SV=1 CANONICAL=F1SUS0-1" }, "locus": { "chromosome": "6", "start_pos": 75612029, "end_pos": 75607925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000074743.2", "url": "https://www.ensembl.org/id/ENSSSCT00000074743.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066340.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066340.1" } ] } }, { "isoform_ac": "A0A8W4FIB5-1", "url": "https://www.uniprot.org/uniprotkb/F1SUS0/entry#A0A8W4FIB5-1", "sequence": { "sequence": "VKDLPCLPTAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIGKRPACHQAFFSPTLPRCAQLSQGWGEVGPWEPQGGVPRAGGLPDPPVHIHLSFQTTRTTMIIKVKGWGQDRWTGSWVESPCRAGGGGMGRREQTPLSSPVAEVTPRPPEEQFQFQSQQQVQQEVIPAPTLEPGHVETEPTEPGPLDCREEQYPCTRLYSIHKPCKQCLNEVCFYSLRRVYVVNKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCGGC", "length": 273, "header": "tr|A0A8W4FIB5-1|A0A8W4FIB5_PIG Computationally mapped isoform of Microfibril associated protein 2 OS=Sus scrofa OX=9823 GN=MFAP2 PE=1 SV=1 CANONICAL=F1SUS0-1" }, "locus": { "chromosome": "6", "start_pos": 75611110, "end_pos": 75607925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000104499.1", "url": "https://www.ensembl.org/id/ENSSSCT00000104499.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078628.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078628.1" } ] } }, { "isoform_ac": "F1SUS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SUS0/entry#F1SUS0-1", "sequence": { "sequence": "MRAASLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPPEEQFQFQSQQQVQQEVIPAPTLEPGHVETEPTEPGPLDCREEQYPCTRLYSIHKPCKQCLNEVCFYSLRRVYVVNKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCGGC", "length": 183, "header": "tr|F1SUS0-1|F1SUS0_PIG Isoform 1 of Microfibril associated protein 2 OS=Sus scrofa OX=9823 GN=MFAP2 PE=1 SV=1 CANONICAL=F1SUS0-1" }, "locus": { "chromosome": "6", "start_pos": 75612029, "end_pos": 75607925, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003865.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003865.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003777.2", "url": "https://www.ensembl.org/id/ENSSSCP00000003777.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUS0", "url": "https://www.uniprot.org/uniprotkb/F1SUS0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100523794", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100523794", "resource": "KEGG Pathway" }, { "id": "R-SSC-1566948", "name": "", "url": 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9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSCGSC", "length": 183 }, "evidence": [ { "id": "F1SUS0", "url": "https://omabrowser.org/oma/group/F1SUS0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P55002-1", "protein_name": "Microfibrillar-associated protein 2", "gene_name": "Mfap2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRAACLFLLFMPGLLAQGQYDLDPLPPFPDHVQYNHYGDQIDNADYYDYQEVSPRTPEEQFQSQQQVQQEVIPAPTPEPAAAGDLETEPTEPGPLDCREEQYPCTRLYSIHKPCKQCLNEVCFYSLRRVYVVNKEICVRTVCAHEELLRADLCRDKFSKCGVMAVSGLCQSVAASCARSCGGC", "length": 183 }, "evidence": [ { "id": "F1SUS0", "url": "https://omabrowser.org/oma/group/F1SUS0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": 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"crossref": [ { "id": "F1SUS3", "url": "https://alphafold.ebi.ac.uk/entry/F1SUS3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003476", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003476", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00051", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00051", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043520", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043520", "database": "InterPro", 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"https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512849", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512849", "resource": "KEGG Pathway" }, { "id": "R-SSC-416476", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416476", "resource": "Reactome", "description": "G alpha (q) signalling events" }, { "id": "R-SSC-417957", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-417957", "resource": "Reactome", "description": "P2Y receptors" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MTB2-1", "protein_name": "P2Y purinoceptor 6", "gene_name": "P2RY6", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"MEQDNGTTQAPGLPPTTCVYREDFKRLLLTPVYSVVLVVGLPLNICVIAQICASRRTLTRSAVYTLNLALADLLYACSLPLLIYNYARGDHWPFGDIACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAAWVVCGVVWLVVTAQCLPTAIFAATGIQRNRTVCYDLSPPILSARYLPYGMALTVIGFLLPFTALLACYCRMARRLCRQDGPAGPVAQERRSKAARMAVVVAAVFAISFLPFHITKTAYLAVRSTPGVSCPVLETFAAAYKGTRPFASANSVLDPILFYFTQQKFRRQPHELLQKLTAKWQRQRV", "length": 328 }, "evidence": [ { "id": "F1SUT5", "url": "https://omabrowser.org/oma/group/F1SUT5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q15077-1", "protein_name": "P2Y purinoceptor 6", "gene_name": "P2RY6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEWDNGTGQALGLPPTTCVYRENFKQLLLPPVYSAVLAAGLPLNICVITQICTSRRALTRTAVYTLNLALADLLYACSLPLLIYNYAQGDHWPFGDFACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAAWLVCVAVWLAVTTQCLPTAIFAATGIQRNRTVCYDLSPPALATHYMPYGMALTVIGFLLPFAALLACYCLLACRLCRQDGPAEPVAQERRGKAARMAVVVAAAFAISFLPFHITKTAYLAVRSTPGVPCTVLEAFAAAYKGTRPFASANSVLDPILFYFTQKKFRRRPHELLQKLTAKWQRQGR", "length": 328 }, "evidence": [ { "id": "F1SUT5", "url": "https://omabrowser.org/oma/group/F1SUT5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q63371-1", "protein_name": "P2Y purinoceptor 6", "gene_name": "P2ry6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"MSMANFTGGRNSCTFHEEFKQVLLPLVYSVVFLLGLPLNAVVIGQIWLARKALTRTTIYMLNLAMADLLYVCSLPLLIYNYTQKDYWPFGDFTCKFVRFQFYTNLHGSILFLTCISVQRYMGICHPLASWHKKKGKKLTWLVCAAVWFIVIAQCLPTFVFASTGTQRNRTVCYDLSPPDRSTSYFPYGITLTITGFLLPFAAILACYCSMARILCQKDELIGLAVHKKKDKAVRMIIIVVIVFSISFFPFHLTKTIYLIVRSSASLPCPTLQAFAIAYKCTRPFASMNSVLDPILFYFTQRKFRESTRYLLDKMSSKWRQDHCISYGS", "length": 328 }, "evidence": [ { "id": "F1SUT5", "url": "https://omabrowser.org/oma/group/F1SUT5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q9ERK9-1", "protein_name": "P2Y purinoceptor 6", "gene_name": "P2ry6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEQDNGTIQAPGLPPTTCVYREDFKRLLLTPVYSVVLVVGLPLNICVIAQICASRRTLTRSAVYTLNLALADLMYACSLPLLIYNYARGDHWPFGDLACRFVRFLFYANLHGSILFLTCISFQRYLGICHPLASWHKRGGRRAAWVVCGVVWLAVTAQCLPTAVFAATGIQRNRTVCYDLSPPILSTRYLPYGMALTVIGFLLPFIALLACYCRMARRLCRQDGPAGPVAQERRSKAARMAVVVAAVFAISFLPFHITKTAYLAVRSTPGVSCPVLETFAAAYKGTRPFASVNSVLDPILFYFTQQKFRRQPHDLLQRLTAKWQRQRV", "length": 328 }, "evidence": [ { "id": "F1SUT5", "url": "https://omabrowser.org/oma/group/F1SUT5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SUT5", "url": "https://www.uniprot.org/uniprotkb/F1SUT5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "G protein-coupled purinergic nucleotide receptor activity", "id": "GO:0045028", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045028", "evidence": [ { "database": "UniProtKB", "id": "F1SUT5", "url": "https://www.uniprot.org/uniprotkb/F1SUT5" } ], "pmid": "" }, { "name": "G protein-coupled ADP receptor activity", "id": "GO:0001621", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001621", "evidence": [ { "database": "UniProtKB", "id": "F1SUT5", "url": "https://www.uniprot.org/uniprotkb/F1SUT5" } ], "pmid": "" }, { "name": "G protein-coupled UDP receptor activity", "id": "GO:0045029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045029", "evidence": [ { "database": "UniProtKB", "id": "F1SUT5", "url": "https://www.uniprot.org/uniprotkb/F1SUT5" } ], "pmid": "" }, { "name": "G protein-coupled UTP receptor activity", "id": "GO:0045030", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045030", "evidence": [ { "database": "UniProtKB", "id": "F1SUT5", "url": "https://www.uniprot.org/uniprotkb/F1SUT5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 7, "go_terms": 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35257:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35257:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15816", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15816", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020951048", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020951048", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SUU3", "url": "https://www.uniprot.org/uniprotkb/F1SUU3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUU3-1", "url": "https://www.uniprot.org/uniprotkb/F1SUU3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLSPLSLPSWLPSLPSLEWGSSLLDALLQGLIGACGVSVLSNLLKVYFFVGCANDPKRQLEKERLRAQWALLETVHLAGLALILTIVGARVAALVVLEFSLRAVSMLLSLDKGSRGPEKLQLYLLCQYSLGCGLTCGLSFLQEGAPHRTLNLLLGLGLASLLSAGARRLRRHVCQLYELHSSQHYCGVCLGLLAGARSLPRLLGRALAVTFMVGNLAAVALINRDFLTTSEAVRFWTPLTICYTLLVIYMQEEQRQHPGLQGQVQTVLVRLGGLFVLLLTVGRWLDLLGILISLLGELWCLVGVRTLLDLCQIQDFPPQRPSVSAPSRPSAPAQPQGTAPS", "length": 341, "header": "tr|F1SUU3-1|F1SUU3_PIG Isoform 1 of Transmembrane protein 82 OS=Sus scrofa OX=9823 GN=TMEM82 PE=4 SV=3 CANONICAL=F1SUU3-1" }, "isoforms": [ { "isoform_ac": "F1SUU3-1", "url": "https://www.uniprot.org/uniprotkb/F1SUU3/entry#F1SUU3-1", "sequence": { "sequence": "MLSPLSLPSWLPSLPSLEWGSSLLDALLQGLIGACGVSVLSNLLKVYFFVGCANDPKRQLEKERLRAQWALLETVHLAGLALILTIVGARVAALVVLEFSLRAVSMLLSLDKGSRGPEKLQLYLLCQYSLGCGLTCGLSFLQEGAPHRTLNLLLGLGLASLLSAGARRLRRHVCQLYELHSSQHYCGVCLGLLAGARSLPRLLGRALAVTFMVGNLAAVALINRDFLTTSEAVRFWTPLTICYTLLVIYMQEEQRQHPGLQGQVQTVLVRLGGLFVLLLTVGRWLDLLGILISLLGELWCLVGVRTLLDLCQIQDFPPQRPSVSAPSRPSAPAQPQGTAPS", "length": 341, "header": "tr|F1SUU3-1|F1SUU3_PIG Isoform 1 of Transmembrane protein 82 OS=Sus scrofa OX=9823 GN=TMEM82 PE=4 SV=3 CANONICAL=F1SUU3-1" }, "locus": { "chromosome": "6", "start_pos": 74919773, "end_pos": 74915770, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003852.5", "url": "https://www.ensembl.org/id/ENSSSCT00000003852.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003764.3", "url": "https://www.ensembl.org/id/ENSSSCP00000003764.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUU3", "url": "https://www.uniprot.org/uniprotkb/F1SUU3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0PJX8-1", "protein_name": "Transmembrane protein 82", "gene_name": "TMEM82", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFSLPSLPSWLPGLPSLEWGSSLLDSLLQGLIGALGVLVLNSLLKVYFFVGCANDPQRRPEKERLRAQWASLETVHLAGLALFLTVVGSRVAALVVLEFSLRAVSTLLSLGKGSQGAAERLQLYLLCQYSLGCGLTCGLSFLQEGAPHRTLNLLLSLGLATLLGLGARRLHRHVCRLYELHSSQRYCGVCLGLLAHAHGLPQLLGRALAIAFAVGDLAAVALINQDFLTTSEAMRFWTPLTICYTLLVIYMQEEQRQHPGLQSQVQTVLVRMGGLFVLLLTVGRWLDLLGILVSLLGELWCLVGVRTLLDLCQIQDFPSQRPPVSTPSQPLPSAPQSQSSAPS", "length": 343 }, "evidence": [ { "id": "F1SUU3", "url": "https://omabrowser.org/oma/group/F1SUU3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E1BAB8-1", "protein_name": "Transmembrane protein 82", "gene_name": "TMEM82", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MFSLLSPTSWLPSLPSLDWGSGLLDALLQGLVGACAVSILNNLLKVYFFVGCANHPELRLEKQRLQARWASLETVHLAGLALILTVVGVRVAALVVLEFSLRAVSMLLSLDKGSQGTKKLQLYLLCQYSLGCGLICGLSFLQEGAPHGTLNLMLGLGLAALLSTGARRLRHHVCQRYELHGSQRYCGICLSLLAGAHHLPRLLGRTLAVTFIVGNLAAVALINRDFLTTSEAVRFWTPLTICYTLLVIYMQEEQRQRPGLKSHVQTVLVRMCGLFVLLLTVGRWLDLLGIFISLLGELWCLVGVRTLLDLCQIQDFPPQRPSVSAPSQPQPSAPAQPEEGTATS", "length": 344 }, "evidence": [ { "id": "F1SUU3", "url": "https://omabrowser.org/oma/group/F1SUU3/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3IKZ3-1", "protein_name": "Transmembrane protein 82", "gene_name": "Tmem82", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFSLPSLSSWLPSLPSFEWGSSLFDRLLQGLIGALGVSVLNNLLKVSFFVACVNDPQRQSHKQRLRSQWASLETVHLAGLTLFLTVVGARVAALVVLEFSLRAVSTVLSLGKGSGDKERLQLFLVCQFSLGCGLTCGLSFLQEGAPHCTLNLLLSLGLATMLGLGARRFRRHICSLYELHTSQRYCGVCLGLLAGQHGLPRLLGRTLAVAFAVSDLAAVALINQDFLNTSEAMRFWTPLTICYTLLVIYMQEEQRQHRFSLQGQVQTVLVRMGGLFILLMAVGRWLDLLGVLVSLVAELWSLAGVRTLIDLCQIQGFPSQRPTVTAAVTPGRVSTLTDPCEPRSSAPALSRSEAPS", "length": 356 }, "evidence": [ { "id": "F1SUU3", "url": "https://omabrowser.org/oma/group/F1SUU3/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5XIF9-1", "protein_name": "Solute carrier family 25 member 34", "gene_name": "Slc25a34", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 654, "start_aa": "Thr", "end_pos": 654, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr654", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV12", "url": "https://www.uniprot.org/uniprotkb/F1SV12" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "F1SV12", "url": "https://www.uniprot.org/uniprotkb/F1SV12" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SV12", "url": "https://www.uniprot.org/uniprotkb/F1SV12" } ], "pmid": "" }, { "name": "regulation of Rho protein signal transduction", "id": "GO:0035023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035023", "evidence": [ { "database": "UniProtKB", "id": "F1SV12", "url": "https://www.uniprot.org/uniprotkb/F1SV12" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1017, "end_pos": 1019, "annotation": "n_glycosylation_sequon" }, { "start_pos": 200, "end_pos": 202, "annotation": "n_glycosylation_sequon" }, { "start_pos": 209, "end_pos": 211, "annotation": "n_glycosylation_sequon" }, { "start_pos": 309, "end_pos": 311, "annotation": "n_glycosylation_sequon" }, { "start_pos": 454, "end_pos": 456, "annotation": "n_glycosylation_sequon" }, { "start_pos": 544, "end_pos": 546, "annotation": "n_glycosylation_sequon" }, { "start_pos": 554, "end_pos": 556, "annotation": "n_glycosylation_sequon" }, { "start_pos": 56, "end_pos": 58, "annotation": "n_glycosylation_sequon" }, { "start_pos": 741, "end_pos": 743, "annotation": "n_glycosylation_sequon" }, { "start_pos": 871, "end_pos": 873, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SV12-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1162, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SV12-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SV12" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SV12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV12" }, { "id": "PS50003", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50003" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PH", "eco_id": "ECO_0000259", "start_pos": 58, "end_pos": 158, "start_aa": "Thr", "end_aa": "Asn", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SV12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV12" }, { "id": "PS50200", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50200" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ras-associating", "eco_id": "ECO_0000259", "start_pos": 167, "end_pos": 256, "start_aa": "Lys", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SV12", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV12" }, { "id": "PS50238", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50238" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rho-GAP", "eco_id": "ECO_0000259", "start_pos": 338, "end_pos": 524, "start_aa": "Thr", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 259, 654 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1017, "end_pos": 1019 }, { "start_pos": 200, "end_pos": 202 }, { "start_pos": 209, "end_pos": 211 }, { "start_pos": 309, "end_pos": 311 }, { "start_pos": 454, "end_pos": 456 }, { "start_pos": 544, "end_pos": 546 }, { "start_pos": 554, "end_pos": 556 }, { "start_pos": 56, "end_pos": 58 }, { "start_pos": 741, "end_pos": 743 }, { "start_pos": 871, "end_pos": 873 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SV17-1", "uniprot_ac": "F1SV17", "uniprot_id": "F1SV17_PIG", "mass": { "chemical_mass": 224207.0, "monoisotopic_mass": 224207.0 }, "refseq": {}, "gene_names": [ { "name": "EXPH5", "type": "recommended", "evidence": [ { "id": "F1SV17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV17" } ] } ], "protein_names": [ { "name": "Exophilin 5", "type": "synonym", "evidence": [ { "id": "F1SV17", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV17/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SV17", "url": "https://www.uniprot.org/uniprotkb/F1SV17" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "EXPH5", "url": "https://www.uniprot.org/uniprotkb/F1SV17", "locus": { "chromosome": "9", "start_pos": 36885212, "end_pos": 37006396, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000015010", "url": "https://www.ensembl.org/id/ENSSSCG00000015010" } ] } } ], "crossref": [ { "id": "ENSSSCG00000015010", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000015010", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR010911", "url": "https://www.ebi.ac.uk/interpro/entry/IPR010911", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039916", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039916", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21469", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21469", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21469:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21469:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A287BES5", "url": "https://www.uniprot.org/uniprotkb/A0A287BES5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BES5-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BES5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV17", "url": "https://www.uniprot.org/uniprotkb/F1SV17", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV17-1", "url": "https://www.uniprot.org/uniprotkb/F1SV17-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMKKPGRSLRCWKETRSYRGQKRPESVTDNHQSAFCLYGSTYSGYFIKLQKTKRDSRWLHGVTGEWFEEIQRKKFCNERDVSQMLKQPLTHRLRKGMAENDPMELQTSRSKNTPNQRNPTSIPFRLSFRSSLASLFSFRKSRKEPSKPQTPGQRGWDGHTPPMSVRGTTLQAKINNSSLENQPVDSAFVPKPASMREGSGVPPWDASRLEDEFFQVLDDLDSKLAQEQSSSSVNIRAPLNYGSRTQFSPFYSSENRHGTLTGRHRNCYNETSNMSIYDVLRPRTPQEGFKTFSPRTRTIYDMYRTREPRVLKEDYMQRNAFGSTSLCFDSRQQSASPAAGYFTARSLHFPTSPQNKSGFIPPSHQQSPKRTPLSSIVWNRSDSSRDWQNQEEFPRAPSPMEIDPADQSLYPRCFQDNRKYEFYQAQSIYQTVGFSARIDNAMSPDPFENSENMPFYHEDNPFTRSFFSNTFGRSREQRLGQSPFWGQQEEYSSWSDFRQRRKPFTSSDRDFETISIEANNAFAGHDHNIPSQHWASFSPSYRTNISRNQEEPPPWQCESQTSTLESMERSQVNRNQSVHFNTPDVCSRTDSSYHITSGGLECQQDSSIEAHINKEAYPLGIAQTPASSFKTTFPQIPDDRGNPQSPSFQNPTVTLHTSKPASLPIRSSTEVAVTNSDSVGPPPHTESQPNSFVTEVNNEKNLNESILEKDKQLNKMDQTNMTDEIPQLVSQTIMSKLLPDFQNPLSQDSAKSSRLVFNASTTVSSKKLPGVISKRDLSKIHKVDELKKDKSYTGNRKLGSAFTQESRTIAPSPSPSQACPQELMVSNDDISSIIKNNRWSSEHTDNQNTQSPEKPAALDTKKERCTTTYSTNHSKLAAHSNMPHDSLDLPSGTLPDSSPSNAPCLDTLLTPSTTVFSWKCPSGKDPFLGEREEKDIDSKSQNSQFSLSLSENKKSNDKCVPVYNEVVEVVKCHSHLPSRDGKGKGKIRRRTSCIEKLSKTESRSSSTSDSSHLTEGTQSNSKAPEPHTIYCTLPRKSAAFPISNRKSESKIMASSSRNEPFPFQINNDVEDPVGKYTSNKFSPNSYESESKCSEVASDSVSIALEATEGMRNTTNTGPASARKGPLPVKRAVSCPLGVPYASPGRDEREEVLLSDTDASTRTLSPWERLINPLGHDSSVPDCALSQRQHQKEYFQENTEKNGQIAASRTGIFSHPNERPLPISSDMSGKESRKTLHKFKTTSMFSVSGDEDNVKCLEVVSIYYTLPRKHSKKFSDLLQKYTQNIDLLTESTKVGTETSNVLEKDKLNYSTEEQSGAPSSEDLKTLVSSAQENHHCLSHTTENMTVLQLPSLGPSEPSLQEMASIEANISLHKEESKAREIPPHSVAKTPLCDSQSRKEKGKKLQSETLHTASMLQGKKVTKEKSSNCQQSIKSGHSGLSNLPAHSEENVENSQIIRSSGGCTDSGTAITAIQSPQKDTTGIAIDESSDGLQPRAVRGEINTDFSPETDKPLSDSESQVFALTPALHKLQLDQETYSGEQDLDSSLQSEPRELPSRSQEVNVAESKAKDEMQKLVWDQPALPGGSNKNKTSLDNLEKGKNKPSVKHRLAAMSKASRKFPSKDLSPRRHVATIFPQHGDSSGFSTLSLGTPECKPLSPEPALKSTESAGESRLSNDEMNVEKSENPLQVTAASNRESSTHLSTQKSNRISQPHQNEFQNISRSQAMYDNSKEVSVPQILERKSGTLVQPTMISLREADFPDQRRRLDPPFQLEPEEKSAVSIPLTSCQQQQRSAASLEWKPEPHSYRSKSLKSINVHGDLLRKSHPAKVRERHFSENTSIDDALSRLTLGNELSNNSEYNRRFKSFSELTSCDENESWALYRDRTKMGRRSATSISRPMDYGIFGKEQQLAFLENVKRSLTQGRLWKPSFLKNPGFLKDDIISPPNPTESSSSNPPSDQMPGDGFSLSAPLNIYVEDPVDSDCDTDTTTDDEYYLDENDKESEL", "length": 2002, "header": "tr|F1SV17-1|F1SV17_PIG Isoform 1 of Exophilin 5 OS=Sus scrofa OX=9823 GN=EXPH5 PE=4 SV=4 CANONICAL=F1SV17-1" }, "isoforms": [ { "isoform_ac": "A0A287BES5-1", "url": "https://www.uniprot.org/uniprotkb/F1SV17/entry#A0A287BES5-1", "sequence": { "sequence": "MTKVPRGFDFSFLNDEEARKILEVLERNEELQRAEKARISKLQKTKRDSRWLHGVTGEWFEEIQRKKFCNERDVSQMLKQPLTHRLRKGMAENDPMELQTSRSKNTPNQRNPTSIPFRLSFRSSLASLFSFRKSRKEPSKPQTPGQRGWDGHTPPMSVRGTTLQAKINNSSLENQPVDSAFVPKPASMREGSGVPPWDASRLEDEFFQVLDDLDSKLAQEQSSSSVNIRAPLNYGSRTQFSPFYSSENRHGTLTGRHRNCYNETSNMSIYDVLRPRTPQEGFKTFSPRTRTIYDMYRTREPRVLKEDYMQRNAFGSTSLCFDSRQQSASPAAGYFTARSLHFPTSPQNKSGFIPPSHQQSPKRTPLSSIVWNRSDSSRDWQNQEEFPRAPSPMEIDPADQSLYPRCFQDNRKYEFYQAQSIYQTVGFSARIDNAMSPDPFENSENMPFYHEDNPFTRSFFSNTFGRSREQRLGQSPFWGQQEEYSSWSDFRQRRKPFTSSDRDFETISIEANNAFAGHDHNIPSQHWASFSPSYRTNISRNQEEPPPWQCESQTSTLESMERSQVNRNQSVHFNTPDVCSRTDSSYHITSGGLECQQDSSIEAHINKEAYPLGIAQTPASSFKTTFPQIPDDRGNPQSPSFQNPTVTLHTSKPASLPIRSSTEVAVTNSDSVGPPPHTESQPNSFVTEVNNEKNLNESILEKDKQLNKMDQTNMTDEIPQLVSQTIMSKLLPDFQNPLSQDSAKSSRLVFNASTTVSSKKLPGVISKRDLSKIHKVDELKKDKSYTGNRKLGSAFTQESRTIAPSPSPSQACPQELMVSNDDISSIIKNNRWSSEHTDNQNTQSPEKPAALDTKKERCTTTYSTNHSKLAAHSNMPHDSLDLPSGTLPDSSPSNAPCLDTLLTPSTTVFSWKCPSGKDPFLGEREEKDIDSKSQNSQFSLSLSENKKSNDKCVPVYNEVVEVVKCHSHLPSRDGKGKGKIRRRTSCIEKLSKTESRSSSTSDSSHLTEGTQSNSKAPEPHTIYCTLPRKSAAFPISNRKSESKIMASSSRNEPFPFQINNDVEDPVGKYTSNKFSPNSYESESKCSEVASDSVSIALEATEGMRNTTNTGPASARKGPLPVKRAVSCPLGVPYASPGRDEREEVLLSDTDASTRTLSPWERLINPLGHDSSVPDCALSQRQHQKEYFQENTEKNGQIAASRTGIFSHPNERPLPISSDMSGKESRKTLHKFKTTSMFSVSGDEDNVKCLEVVSIYYTLPRKHSKKFSDLLQKYTQNIDLLTESTKVGTETSNVLEKDKLNYSTEEQSGAPSSEDLKTLVSSAQENHHCLSHTTENMTVLQLPSLGPSEPSLQEMASIEANISLHKEESKAREIPPHSVAKTPLCDSQSRKEKGKKLQSETLHTASMLQGKKVTKEKSSNCQQSIKSGHSGLSNLPAHSEENVENSQIIRSSGGCTDSGTAITAIQSPQKDTTGIAIDESSDGLQPRAVRGEINTDFSPETDKPLSDSESQVFALTPALHKLQLDQETYSGEQDLDSSLQSEPRELPSRSQEVNVAESKAKDEMQKLVWDQPALPGGSNKNKTSLDNLEKGKNKPSVKHRLAAMSKASRKFPSKDLSPRRHVATIFPQHGDSSGFSTLSLGTPECKPLSPEPALKSTESAGESRLSNDEMNVEKSENPLQVTAASNRESSTHLSTQKSNRISQPHQNEFQNISRSQAMYDNSKEVSVPQILERKSGTLVQPTMISLREADFPDQRRRLDPPFQLEPEEKSAVSIPLTSCQQQQRSAASLEWKPEPHSYRSKSLKSINVHGDLLRKSHPAKVRERHFSENTSIDDALSRLTLGNELSNNSEYNRRFKSFSELTSCDENESWALYRDRTKMGRRSATSISRPMDYGIFGKEQQLAFLENVKRSLTQGRLWKPSFLKNPGFLKDDIISPPNPTESSSSNPPSDQMPGDGFSLSAPLNIYVEDPVDSDCDTDTTTDDEYYLDENDKESEL", "length": 1995, "header": "tr|A0A287BES5-1|A0A287BES5_PIG Computationally mapped isoform of Exophilin 5 OS=Sus scrofa OX=9823 GN=EXPH5 PE=4 SV=2 CANONICAL=F1SV17-1" }, "locus": { "chromosome": "9", "start_pos": 36970712, "end_pos": 36888085, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053995.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053995.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055029.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055029.2" } ] } }, { "isoform_ac": "F1SV17-1", "url": "https://www.uniprot.org/uniprotkb/F1SV17/entry#F1SV17-1", "sequence": { "sequence": "MMKKPGRSLRCWKETRSYRGQKRPESVTDNHQSAFCLYGSTYSGYFIKLQKTKRDSRWLHGVTGEWFEEIQRKKFCNERDVSQMLKQPLTHRLRKGMAENDPMELQTSRSKNTPNQRNPTSIPFRLSFRSSLASLFSFRKSRKEPSKPQTPGQRGWDGHTPPMSVRGTTLQAKINNSSLENQPVDSAFVPKPASMREGSGVPPWDASRLEDEFFQVLDDLDSKLAQEQSSSSVNIRAPLNYGSRTQFSPFYSSENRHGTLTGRHRNCYNETSNMSIYDVLRPRTPQEGFKTFSPRTRTIYDMYRTREPRVLKEDYMQRNAFGSTSLCFDSRQQSASPAAGYFTARSLHFPTSPQNKSGFIPPSHQQSPKRTPLSSIVWNRSDSSRDWQNQEEFPRAPSPMEIDPADQSLYPRCFQDNRKYEFYQAQSIYQTVGFSARIDNAMSPDPFENSENMPFYHEDNPFTRSFFSNTFGRSREQRLGQSPFWGQQEEYSSWSDFRQRRKPFTSSDRDFETISIEANNAFAGHDHNIPSQHWASFSPSYRTNISRNQEEPPPWQCESQTSTLESMERSQVNRNQSVHFNTPDVCSRTDSSYHITSGGLECQQDSSIEAHINKEAYPLGIAQTPASSFKTTFPQIPDDRGNPQSPSFQNPTVTLHTSKPASLPIRSSTEVAVTNSDSVGPPPHTESQPNSFVTEVNNEKNLNESILEKDKQLNKMDQTNMTDEIPQLVSQTIMSKLLPDFQNPLSQDSAKSSRLVFNASTTVSSKKLPGVISKRDLSKIHKVDELKKDKSYTGNRKLGSAFTQESRTIAPSPSPSQACPQELMVSNDDISSIIKNNRWSSEHTDNQNTQSPEKPAALDTKKERCTTTYSTNHSKLAAHSNMPHDSLDLPSGTLPDSSPSNAPCLDTLLTPSTTVFSWKCPSGKDPFLGEREEKDIDSKSQNSQFSLSLSENKKSNDKCVPVYNEVVEVVKCHSHLPSRDGKGKGKIRRRTSCIEKLSKTESRSSSTSDSSHLTEGTQSNSKAPEPHTIYCTLPRKSAAFPISNRKSESKIMASSSRNEPFPFQINNDVEDPVGKYTSNKFSPNSYESESKCSEVASDSVSIALEATEGMRNTTNTGPASARKGPLPVKRAVSCPLGVPYASPGRDEREEVLLSDTDASTRTLSPWERLINPLGHDSSVPDCALSQRQHQKEYFQENTEKNGQIAASRTGIFSHPNERPLPISSDMSGKESRKTLHKFKTTSMFSVSGDEDNVKCLEVVSIYYTLPRKHSKKFSDLLQKYTQNIDLLTESTKVGTETSNVLEKDKLNYSTEEQSGAPSSEDLKTLVSSAQENHHCLSHTTENMTVLQLPSLGPSEPSLQEMASIEANISLHKEESKAREIPPHSVAKTPLCDSQSRKEKGKKLQSETLHTASMLQGKKVTKEKSSNCQQSIKSGHSGLSNLPAHSEENVENSQIIRSSGGCTDSGTAITAIQSPQKDTTGIAIDESSDGLQPRAVRGEINTDFSPETDKPLSDSESQVFALTPALHKLQLDQETYSGEQDLDSSLQSEPRELPSRSQEVNVAESKAKDEMQKLVWDQPALPGGSNKNKTSLDNLEKGKNKPSVKHRLAAMSKASRKFPSKDLSPRRHVATIFPQHGDSSGFSTLSLGTPECKPLSPEPALKSTESAGESRLSNDEMNVEKSENPLQVTAASNRESSTHLSTQKSNRISQPHQNEFQNISRSQAMYDNSKEVSVPQILERKSGTLVQPTMISLREADFPDQRRRLDPPFQLEPEEKSAVSIPLTSCQQQQRSAASLEWKPEPHSYRSKSLKSINVHGDLLRKSHPAKVRERHFSENTSIDDALSRLTLGNELSNNSEYNRRFKSFSELTSCDENESWALYRDRTKMGRRSATSISRPMDYGIFGKEQQLAFLENVKRSLTQGRLWKPSFLKNPGFLKDDIISPPNPTESSSSNPPSDQMPGDGFSLSAPLNIYVEDPVDSDCDTDTTTDDEYYLDENDKESEL", 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"categories": [ "Protein" ] }, { "id": "F1SV32-1", "url": "https://www.uniprot.org/uniprotkb/F1SV32-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEAASPAGPSAPRPPAQAAEGAPISLLRRVRGALFTWNILKTIALGQMLSLCICGTAITSQYLAEKYKVNTPMLQSFINYCLLFLIYTMMLAFQSGNNNLLCILKKKWWKYILLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILYARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDVLVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGLFLFGYKFSGLYILSFAVIMVGFILYCSTPTRTAEPAESSVPPPVTSIGIDNLGLKLEENLPETHSVAL", "length": 375, "header": "tr|F1SV32-1|F1SV32_PIG Isoform 1 of Solute carrier family 35 member F2 OS=Sus scrofa OX=9823 GN=SLC35F2 PE=3 SV=3 CANONICAL=F1SV32-1" }, "isoforms": [ { "isoform_ac": "F1SV32-1", "url": "https://www.uniprot.org/uniprotkb/F1SV32/entry#F1SV32-1", "sequence": { "sequence": 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"title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV32", "url": "https://www.uniprot.org/uniprotkb/F1SV32" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100526002", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100526002", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JTZ7-1", "protein_name": "Solute carrier family 35, member F2", "gene_name": "Slc35f2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAESPASTRASEPRALGTVGSIGSQLSRIRGKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTVMLAFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILRARYKVIHFIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALCMFCLYSFMPLVMKVTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFILYCSTPTRTAEPAESSVPPVTSIGIDNLGLKLEESGLSETHSAVL", "length": 375 }, "evidence": [ { "id": "F1SV32", "url": "https://omabrowser.org/oma/group/F1SV32/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q1NAC5-1", "protein_name": "Solute carrier family 35 member F2", "gene_name": "SLC35F2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"https://www.genome.jp/dbget-bin/www_bget?ssc:100525241", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WLKANIK", "url": "https://omabrowser.org/oma/group/WLKANIK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SV33", "url": "https://www.orthodb.org/?gene=F1SV33", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21732", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21732", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21732:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21732:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13873", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13873", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005667348", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005667348", "database": "RefSeq", 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"MKQLKRKRKSNFSVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGEGEQRTGTEVKRRYLDWRALMKRKRMKANIKLVGSGFPLPTSDLDDSLTEEIDEKIGFRNDTNFDWQNVADFRDAGGSLTEVKVEEEERDPQSPEFEIEEEEEMLSSVIPDSRRENELPDFPHIDEFFTLNSTPSRSAFDEPHLLVNIEKQKLELEKRRLDIEAERLQVEKERLQIEKERLRHLDMEHERLQLEKERLQIEREKLRLQIVNSEKPSLENELGQGEKSIHQPPDIETEKLKLERERLQLEKDRLQFLKFESEKLQIEKERLQVEKERLRIQKEGHLQ", "length": 345, "header": "tr|F1SV33-1|F1SV33_PIG Isoform 1 of Myb/SANT-like DNA-binding domain-containing protein 4 OS=Sus scrofa OX=9823 GN=MSANTD4 PE=4 SV=1 CANONICAL=F1SV33-1" }, "locus": { "chromosome": "9", "start_pos": 35832233, "end_pos": 35830849, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042935.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042935.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000038401.1", "url": "https://www.ensembl.org/id/ENSSSCP00000038401.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV33", "url": "https://www.uniprot.org/uniprotkb/F1SV33" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525241", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525241", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C0N5-1", "protein_name": "Myb/SANT DNA binding domain containing 4 with coiled-coils", "gene_name": "MSANTD4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKQLKRKRKSNFSVQETQTLLKEIRKRREVLFSKQLNTTINEMKRKAWEEIAECVNAVGEGEQRTGTEVKRRYLDWRALMKRKRLNANIKAVGAGFHLPSSDLDDSLNEDMDDKMGFANESSFEWQNITDFREAGGSLTEIKVEEEEEDPQNFEFPIEEEEIFSSVLPDSKKENDLPDFTHIEEFGNLSSAQARLAYEDSHLLINLEKQKVELEKQRLDIEAERLQVEKERLQIEKERLRHIDLEHERLQLEKERLQIEREKLRLETLRAEKPALENDLTQSEKPIIQPLDLETEKLKLEKERLQLEKERLQFLKFESEKLQIEKERLQVEKERLRIQREGLLQ", "length": 344 }, "evidence": [ { "id": "F1SV33", "url": "https://omabrowser.org/oma/group/F1SV33/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3HPN2-1", "protein_name": "Myb/SANT-like DNA-binding domain-containing protein 4", "gene_name": "Msantd4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKQLKRKRKSNFSVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGEGEQRTGTEVKRRYLDWRALMKRKRMKANMKLVGSGFPLPTSDLDDSLTEEIDEKIAFRNDANFDWQNVSDFRDAGGSLTEVKVEEEERDPQSPEFEIEEEEEMLSSVIPDSRRESELPDFPHIDEFFTLNSTPSRPSYDEPHLLMNIEKQKLELEKRRLDIEAERLQVEKERLQIEKERLRHLDLEHERLQLEKERLQIEREKWRLQLVSAEKPAIDNELGQGEKSMLQPQDIEAEKLKLERERLQLEKDRLQFLKFESEKLQIEKERLQVEKERLRIQKEGHLP", "length": 345 }, "evidence": [ { "id": "F1SV33", "url": "https://omabrowser.org/oma/group/F1SV33/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q2KJB9-1", "protein_name": "Myb/SANT-like DNA-binding domain-containing protein 4", "gene_name": "MSANTD4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKQLKRKRKSNFSVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGEGEQRTGTEVKRRYLDWRALMKRKKMKANIKLVGSGFPLPTSDLDDSLTEEIDEKIGFRSDTNFDWQNVADFRDAGGSLTEVKVEEEERDPQSPEFEIEEEEEMLSSVIPDSRRENELPDFPHIDEFFTLNSTPSRSAYDEPHLLVNIEKQKLELEKRRLDIEAERLQVEKERLQIEKERLRHLDMEHERLQLEKERLQIEREKLRLQIVNSEKPSLESELGQGEKSIHQPQDIETEKLKLERERLQLEKDRLQFLKFESEKLQIEKERLQVEKERLRIQKEGHLQ", "length": 345 }, "evidence": [ { "id": "F1SV33", "url": "https://omabrowser.org/oma/group/F1SV33/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q501L3-1", "protein_name": "Myb/SANT-like DNA-binding domain-containing protein 4", "gene_name": "Msantd4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SV33", "url": "https://www.uniprot.org/uniprotkb/F1SV33" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 119, "end_pos": 121, "annotation": "n_glycosylation_sequon" }, { "start_pos": 11, "end_pos": 13, "annotation": "n_glycosylation_sequon" }, { "start_pos": 190, "end_pos": 192, "annotation": "n_glycosylation_sequon" }, { "start_pos": 37, "end_pos": 39, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SV33", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV33" }, { "id": "PF13873", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13873" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": 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domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=F1SV37-1" }, "isoforms": [ { "isoform_ac": "A0A287BQJ0-1", "url": "https://www.uniprot.org/uniprotkb/F1SV37/entry#A0A287BQJ0-1", "sequence": { "sequence": "NNVLNRGELQRLEEEANLIVNRTKDLIDDLAEKTQMATEIFMHHLFNPEKQLSLDTSCEGEGGPDTPALIICSKEFDYLLISMDLTALVMDWETLRQFAARQDHQSSDSTFLVFMSHGILDGICGTKHREQQPYILHDDTIFQIFNNHNCQSLKDKPKVILMQACRGKGAGIVWVTDMGEDSAYRYGQSLQCSIWNDAITKTHVEKDFIAFKSSTPCKIKSNGSLFISKRIYYLKEYSLCHHLEEIFRKLGIFLSFQLVSMTRYFYLFPGN", "length": 271, "header": "tr|A0A287BQJ0-1|A0A287BQJ0_PIG Computationally mapped isoform of Caspase family p20 domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=F1SV37-1" }, "locus": { "chromosome": "9", "start_pos": 35162903, "end_pos": 35153272, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044815.1", "url": "https://www.ensembl.org/id/ENSSSCT00000044815.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058702.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058702.1" } ] } }, { "isoform_ac": "A0A8W4FL14-1", "url": "https://www.uniprot.org/uniprotkb/F1SV37/entry#A0A8W4FL14-1", "sequence": { "sequence": "PNQVTRPVSNIYYFKKCNNVLNRGELQRLEEEANLIVNRTKDLIDDLAEKTQMATEIFMHHLFNPEKQLSLAFFLFFFFSLSDSQETQDSQRRKLKLCPGDHFHKLKTKTDEQLIMYLLSADTSCEGEGGPDTPALIICSKEFDYLLISMVLKQFAARQDHQSSDSTFLVFMSHGILDGICGTKHREQQPYILHDDTIFQIFNNHNCQSLKDKPKVILMQACRGKGAGIVWVTDMGEDSAYRYGQSLQCSIWNDAITKTHVEKDFIAFKSSTPCKIKSNGSLFISKRIYYLKEYSLCHHLEEIFRKLGIFLSFQLVSMTRYFYLFPGN", "length": 328, "header": "tr|A0A8W4FL14-1|A0A8W4FL14_PIG Computationally mapped isoform of Caspase family p20 domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=F1SV37-1" }, "locus": { "chromosome": "9", "start_pos": 35163380, "end_pos": 35153272, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000097456.1", "url": "https://www.ensembl.org/id/ENSSSCT00000097456.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080166.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080166.1" } ] } }, { "isoform_ac": "F1SV37-1", "url": "https://www.uniprot.org/uniprotkb/F1SV37/entry#F1SV37-1", "sequence": { "sequence": "PNQVTRPVSNIYYFKKCNNVLNRGELQRLEEEANLIVNRTKDLIDDLAEKTQMATEIFMHHLFNPEKQLSLAFFLFFFFSLSDSQETQDSQRRKLKLCPGDHFHKLKTKTDEQLIMYLLSADTSCEGEGGPDTPALIICSKEFDYLLINLLENLDTLQFAARQDHQSSDSTFLVFMSHGILDGICGTKHREQQPYILHDDTIFQIFNNHNCQSLKDKPKVILMQACRGKGAGIVWVTDMGEDSAYRYGQSLQCSIWNDAITKTHVEKDFIAFKSSTPCKIKSNGSLFISKRIYYLKEYSLCHHLEEIFRKLGIFLSFQLVSMTRYFYLFPGN", "length": 332, "header": "tr|F1SV37-1|F1SV37_PIG Isoform 1 of Caspase family p20 domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=F1SV37-1" }, "locus": { "chromosome": "9", "start_pos": 35163380, "end_pos": 35153272, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016360.3", "url": "https://www.ensembl.org/id/ENSSSCT00000016360.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015921.3", "url": "https://www.ensembl.org/id/ENSSSCP00000015921.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" }, { "name": "NLRP1 inflammasome complex", "id": "GO:0072558", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0072558", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" }, { "name": "positive regulation of inflammatory response", "id": "GO:0050729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050729", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" }, { "name": "positive regulation of neuron apoptotic process", "id": "GO:0043525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043525", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "cysteine-type peptidase activity", "id": "GO:0008234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008234", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" }, { "name": "cysteine-type endopeptidase activity", "id": "GO:0004197", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004197", "evidence": [ { "database": "UniProtKB", "id": "F1SV37", "url": "https://www.uniprot.org/uniprotkb/F1SV37" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 283, "end_pos": 285, "annotation": "n_glycosylation_sequon" }, { "start_pos": 38, "end_pos": 40, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SV37-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 332, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SV37-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SV37" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SV37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV37" }, { "id": "PS50207", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50207" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Caspase family p10", "eco_id": "ECO_0000259", "start_pos": 259, "end_pos": 330, "start_aa": "Ala", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SV37", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV37" }, { "id": "PS50208", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50208" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Caspase family p20", "eco_id": "ECO_0000259", "start_pos": 152, "end_pos": 230, "start_aa": "Glu", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 283, "end_pos": 285 }, { "start_pos": 38, "end_pos": 40 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SV75-1", "uniprot_ac": "F1SV75", "uniprot_id": "F1SV75_PIG", "mass": { "chemical_mass": 44536.0, "monoisotopic_mass": 44536.0 }, "refseq": { "ac": "XP_003129852", "name": "angiopoietin-related protein 5", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129852" }, "gene_names": [ { "name": "ANGPTL5", "type": "recommended", "evidence": [ { "id": "F1SV75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV75" } ] }, { "name": "ANGPTL5", "type": "synonym", "evidence": [ { "id": "XP_003129852", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129852" } ] } ], "protein_names": [ { "name": "Angiopoietin like 5", "type": "synonym", "evidence": [ { "id": "F1SV75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV75/entry#names_and_taxonomy" } ] }, { "name": "angiopoietin-related protein 5", "type": "synonym", "evidence": [ { "id": "XP_003129852", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129852" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SV75", "url": "https://www.uniprot.org/uniprotkb/F1SV75" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ANGPTL5", "url": "https://www.uniprot.org/uniprotkb/F1SV75", "locus": { "chromosome": "9", "start_pos": 32610297, "end_pos": 32627337, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014978", "url": "https://www.ensembl.org/id/ENSSSCG00000014978" } ] } } ], "crossref": [ { "id": "ENSSSCG00000014978", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014978", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00087", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00087", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100519911", "url": "https://www.ncbi.nlm.nih.gov/gene/100519911", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002181", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002181", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014716", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014716", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020837", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020837", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036056", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036056", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050373", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050373", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519911", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519911", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "EKHSICG", "url": "https://omabrowser.org/oma/group/EKHSICG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SV75", "url": "https://www.orthodb.org/?gene=F1SV75", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19143", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19143", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19143:SF185", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19143:SF185", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00147", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00147", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003129852", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003129852", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SV75", "url": "https://www.uniprot.org/uniprotkb/F1SV75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV75-1", "url": "https://www.uniprot.org/uniprotkb/F1SV75-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMYLFQASLLFLNLCIFTCGEAIRGNCVHHSTDSPVVNIVEDESNAKGENKSNDTVYKEDCEESCDVKSKIPREEKHFMCRNLQNSIVSYTRSTKKLLRNMMDEQQASLDYLSNQVNELMNRVLLLTTEVFRKQLDTFPHRPVQSHGLDCTDIKDTIGSVTKTPSGLYIIHPEGSSYPFEVMCDMDYRGGGWTVIQKRIDGVIDFQRLWCDYLDGFGDLLGEFWLGLKKIFYIVNQKNTSFMLYVALESEDDTFAYASYDNFWLEDETRFFKMHLGRYSGNAGDAFRGFCKEDNQNAVPFSTSDVDNDGCRPACFLNGQSVKSCSQLHNNTGWWFNQCGLSNLNGIHNFPGKFLATGIRWGTWTKNNSPVKIKSVSMKIRRIYDPYFK", "length": 388, "header": "tr|F1SV75-1|F1SV75_PIG Isoform 1 of Angiopoietin like 5 OS=Sus scrofa OX=9823 GN=ANGPTL5 PE=4 SV=2 CANONICAL=F1SV75-1" }, "isoforms": [ { "isoform_ac": "F1SV75-1", "url": "https://www.uniprot.org/uniprotkb/F1SV75/entry#F1SV75-1", "sequence": { "sequence": "MMYLFQASLLFLNLCIFTCGEAIRGNCVHHSTDSPVVNIVEDESNAKGENKSNDTVYKEDCEESCDVKSKIPREEKHFMCRNLQNSIVSYTRSTKKLLRNMMDEQQASLDYLSNQVNELMNRVLLLTTEVFRKQLDTFPHRPVQSHGLDCTDIKDTIGSVTKTPSGLYIIHPEGSSYPFEVMCDMDYRGGGWTVIQKRIDGVIDFQRLWCDYLDGFGDLLGEFWLGLKKIFYIVNQKNTSFMLYVALESEDDTFAYASYDNFWLEDETRFFKMHLGRYSGNAGDAFRGFCKEDNQNAVPFSTSDVDNDGCRPACFLNGQSVKSCSQLHNNTGWWFNQCGLSNLNGIHNFPGKFLATGIRWGTWTKNNSPVKIKSVSMKIRRIYDPYFK", "length": 388, "header": "tr|F1SV75-1|F1SV75_PIG Isoform 1 of Angiopoietin like 5 OS=Sus scrofa OX=9823 GN=ANGPTL5 PE=4 SV=2 CANONICAL=F1SV75-1" }, "locus": { "chromosome": "9", "start_pos": 32627266, "end_pos": 32610553, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000016340.4", "url": "https://www.ensembl.org/id/ENSSSCT00000016340.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000015901.3", "url": "https://www.ensembl.org/id/ENSSSCP00000015901.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV75", "url": "https://www.uniprot.org/uniprotkb/F1SV75" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519911", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519911", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C2K8-1", "protein_name": "Angiopoietin like 5", "gene_name": "ANGPTL5", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MNSFRVTSLISLSVLLLGWGETVISDVKPCSSKGTRNVGAVEEPLKAEEKNKSADISKQKEQCLVPCDVQAKILRGEKQYMCRNLQSSLVEYARSTKKLVRNMMDDQQSSLDYLSNQVNELMNRVLLLNAEVLRKHLDPLPYKTVQSHGLDCTDIKDTIGSVSKTPSGLYIIHPEGSNYAFEVLCDMDFQGGGWTVLQKRTDGIITFQRTWSEYLDGFGDLSGEFWIGLRKIFYIVNQKATTFSLYVDLESENDKHAYASYDAFWIEDEACSFKIHLGRYSGNAGDAFRGYRKEDNQNSMPFSTFDVDNDGCRPVCTIKEQPVKSCSNFSDNTGWWFNQCGLANLNGIHRYTGRFLATGIHWDTWTVNNKPVKIKSVSMKIRRNYDPYFH", "length": 390 }, "evidence": [ { "id": "F1SV75", "url": "https://omabrowser.org/oma/group/F1SV75/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q86XS5-1", "protein_name": "Angiopoietin-related protein 5", "gene_name": "ANGPTL5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "F1SV75", "url": "https://www.uniprot.org/uniprotkb/F1SV75" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 238, "end_pos": 240, "annotation": "n_glycosylation_sequon" }, { "start_pos": 329, "end_pos": 331, "annotation": "n_glycosylation_sequon" }, { "start_pos": 366, "end_pos": 368, "annotation": "n_glycosylation_sequon" }, { "start_pos": 50, "end_pos": 52, "annotation": "n_glycosylation_sequon" }, { "start_pos": 53, "end_pos": 55, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SV75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV75" }, { "id": "PS51406", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51406" } ], 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"url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127825" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SV78", "url": "https://www.uniprot.org/uniprotkb/F1SV78" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C6H1orf94", "url": "https://www.uniprot.org/uniprotkb/F1SV78", "locus": {} } ], "crossref": [ { "id": "F1SV78", "url": "https://alphafold.ebi.ac.uk/entry/F1SV78", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003623", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003623", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100522874", "url": "https://www.ncbi.nlm.nih.gov/gene/100522874", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR031496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR031496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522874", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522874", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SV78", "url": "https://www.orthodb.org/?gene=F1SV78", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR35674", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35674", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35674:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35674:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15752", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15752", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003127825", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127825", 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"PTHR32289", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32289", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR32289:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR32289:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF11652", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11652", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003127810", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127810", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SV86", "url": "https://www.uniprot.org/uniprotkb/F1SV86", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV86-1", "url": "https://www.uniprot.org/uniprotkb/F1SV86-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLGPLKFQAVGEEDEEDEEEESLDSVKALTTKLQLQTRRPSYLEWSARVQSQAWRKAQARPGPEGPGAICGFDSMESALEWLRQELREMQTQDRQLAGQLLRLRAQLHRLKVDQACHLHQELLNEAELELELEPGAGLALAPPLRHLGLTRMNISARRFTLC", "length": 163, "header": "tr|F1SV86-1|F1SV86_PIG Isoform 1 of Family with sequence similarity 167 member B OS=Sus scrofa OX=9823 GN=FAM167B PE=3 SV=3 CANONICAL=F1SV86-1" }, "isoforms": [ { "isoform_ac": "F1SV86-1", "url": "https://www.uniprot.org/uniprotkb/F1SV86/entry#F1SV86-1", "sequence": { "sequence": "MSLGPLKFQAVGEEDEEDEEEESLDSVKALTTKLQLQTRRPSYLEWSARVQSQAWRKAQARPGPEGPGAICGFDSMESALEWLRQELREMQTQDRQLAGQLLRLRAQLHRLKVDQACHLHQELLNEAELELELEPGAGLALAPPLRHLGLTRMNISARRFTLC", "length": 163, "header": "tr|F1SV86-1|F1SV86_PIG Isoform 1 of Family with sequence similarity 167 member B OS=Sus scrofa OX=9823 GN=FAM167B PE=3 SV=3 CANONICAL=F1SV86-1" }, "locus": { "chromosome": "6", "start_pos": 88717008, "end_pos": 88715918, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004011.3", "url": "https://www.ensembl.org/id/ENSSSCT00000004011.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003920.3", "url": "https://www.ensembl.org/id/ENSSSCP00000003920.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV86", "url": "https://www.uniprot.org/uniprotkb/F1SV86" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519719", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519719", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "M0R8L1-1", "protein_name": "Family with sequence similarity 167, member B", "gene_name": "Fam167b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLGQLKFQAVGEEDEEDEEESLDSVKALTAKLQLQTRRPSYLEWTARVQSRAWCRAQARPEPVGPGAICGFDSMDSALEWLRRELVSLQEMRAQDRQLAGQLLRLRAQLHRLKVDQVCHLHQELLDEAELEMELESGMGLALAPPLRHLGLTRMNISARRFTLC", "length": 165 }, "evidence": [ { "id": "F1SV86", "url": "https://omabrowser.org/oma/group/F1SV86/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P17257-1", "protein_name": "Protein FAM167B", "gene_name": "Fam167b", "tax_id": 10090, "organism": "Mus 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"n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SV86-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 163, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SV86-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SV86" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 154, "end_pos": 156 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"uniprot_canonical_ac": "F1SV92-1", "uniprot_ac": "F1SV92", "uniprot_id": "F1SV92_PIG", "mass": { "chemical_mass": 53012.0, "monoisotopic_mass": 53012.0 }, "refseq": { "ac": "XP_003127804", "name": "IQ domain-containing protein C isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127804" }, "gene_names": [ { "name": "IQCC", "type": "recommended", "evidence": [ { "id": "F1SV92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV92" } ] }, { "name": "IQCC", "type": "synonym", "evidence": [ { "id": "XP_003127804", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127804" } ] } ], "protein_names": [ { "name": "IQ domain-containing protein C isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003127804", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127804" } ] }, { "name": "IQ motif containing C", "type": "synonym", "evidence": [ { "id": "F1SV92", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV92/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SV92", "url": "https://www.uniprot.org/uniprotkb/F1SV92" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "IQCC", "url": "https://www.uniprot.org/uniprotkb/F1SV92", "locus": { "chromosome": "6", "start_pos": 88685796, "end_pos": 88683119, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003610", "url": "https://www.ensembl.org/id/ENSSSCG00000003610" } ] } } ], "crossref": [ { "id": "ENSSSCG00000003610", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003610", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100518737", "url": "https://www.ncbi.nlm.nih.gov/gene/100518737", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042506", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042506", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100518737", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518737", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DHRAQTC", "url": "https://omabrowser.org/oma/group/DHRAQTC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SV92", "url": "https://www.orthodb.org/?gene=F1SV92", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16049", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16049", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16049:SF8", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16049:SF8", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00612", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00612", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003127804", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003127804", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SV92", "url": "https://www.uniprot.org/uniprotkb/F1SV92", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV92-1", "url": "https://www.uniprot.org/uniprotkb/F1SV92-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPERLVRKVTTLQACVRGFLVRRQFQSLRAEYEAVVQEIEGDLGTLQWTRGWIPRPQFLPKKAKSHQTWKAGERVPDPEQELWSRFPCKEPEKEAIWEGMILKKSGESSANSGSFPCRDESPWPQNEQSTKTRKLSQGETRDMSKMENPEAAGPGLSHSQTELQELQYQRSHLAMELLWLQQAINSRKEYLILKQTLNSSEVNQTRDKPCMCPDHGGQGCEKGESQPVPPLEDQSSRARPTGEPDHVDDSCWRLKSQPHRSPERLATTDRTTAGAKYRDSGYRRTGPQLPILSDNQAVGKRFNKEPDAGEQIFGGTCLQLTELLENQTPKGLKPRGYCSGKARTQLPTLCEDPYIEGKSPRGPDQKKPDGQKTRPRELGLSEDHVIWDGSLAEHGGLDLWKNKPPKSQTSSDKSSRDRTSNESSHEGWKTQKTVPWKSRPPEKLSSTGSDHTAEDHWRGRPWKTGPPG", "length": 469, "header": "tr|F1SV92-1|F1SV92_PIG Isoform 1 of IQ motif containing C OS=Sus scrofa OX=9823 GN=IQCC PE=4 SV=1 CANONICAL=F1SV92-1" }, "isoforms": [ { "isoform_ac": "F1SV92-1", "url": "https://www.uniprot.org/uniprotkb/F1SV92/entry#F1SV92-1", "sequence": { "sequence": "MEPERLVRKVTTLQACVRGFLVRRQFQSLRAEYEAVVQEIEGDLGTLQWTRGWIPRPQFLPKKAKSHQTWKAGERVPDPEQELWSRFPCKEPEKEAIWEGMILKKSGESSANSGSFPCRDESPWPQNEQSTKTRKLSQGETRDMSKMENPEAAGPGLSHSQTELQELQYQRSHLAMELLWLQQAINSRKEYLILKQTLNSSEVNQTRDKPCMCPDHGGQGCEKGESQPVPPLEDQSSRARPTGEPDHVDDSCWRLKSQPHRSPERLATTDRTTAGAKYRDSGYRRTGPQLPILSDNQAVGKRFNKEPDAGEQIFGGTCLQLTELLENQTPKGLKPRGYCSGKARTQLPTLCEDPYIEGKSPRGPDQKKPDGQKTRPRELGLSEDHVIWDGSLAEHGGLDLWKNKPPKSQTSSDKSSRDRTSNESSHEGWKTQKTVPWKSRPPEKLSSTGSDHTAEDHWRGRPWKTGPPG", "length": 469, "header": "tr|F1SV92-1|F1SV92_PIG Isoform 1 of IQ motif containing C OS=Sus scrofa OX=9823 GN=IQCC PE=4 SV=1 CANONICAL=F1SV92-1" }, "locus": { "chromosome": "6", "start_pos": 88685496, "end_pos": 88683131, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004005.4", "url": "https://www.ensembl.org/id/ENSSSCT00000004005.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003914.2", "url": "https://www.ensembl.org/id/ENSSSCP00000003914.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV92", "url": "https://www.uniprot.org/uniprotkb/F1SV92" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100518737", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100518737", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A2ADZ8-1", "protein_name": "IQ domain-containing protein C", "gene_name": "Iqcc", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPDLFLRKVSTLQAGFRGFLVRRQFQSLRAEYEAIVQEIEGDLSTLQWTGGWIPKPVFLPEAKSHQSWKAEKISNPEQKLWSHSPHKDSEKELIWEEMVQKKTEKSPANPGSLCRDDSAWPQAEQGRKASQGNSQDTSVSKMENADLGLSQSQQELQEQRNHLAMELLWLQQAINSRKEYLILKQTLRSPEASQTRDKHRGQAYEKTSLHSSCVLDNQSYRDRIIGESHHAEDSSHKGRLKPQKHPDSVTSAGKTTAGSKGRELCYRNSASQLPAALESQAGGDRVTKGPDHGGQPFKETSLQQLKVLEDQIPGDLKFRSPCSRKAETQLPTLSENQNIEDRYSRKPSRSAGPCDLNILEGHMIWDETLAGQEQGSLDLIRTKPPKSQPPSAGSSGHGNTSELSPEGWKNRGILQWR", "length": 418 }, "evidence": [ { "id": "F1SV92", "url": "https://omabrowser.org/oma/group/F1SV92/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0RCW8-1", "protein_name": "IQ motif containing C", "gene_name": "Iqcc", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDPDLFLRKVSTLQAGFRGFLVRRQFQSLRAEYEAIVEEIEGDVRTLRWTGGWIPKPIFLPEAKSHRSWKIEKIPNPEQKLSSHSPHKDSEKELLWEEMVLRKTDKNPAEPGSLCRGDSAWPQAEPGRKASQGNSRDPSISKVQSAVTDLGLSQTQQELQEQRNHLAMELLWLQQAINSRKEYLILKQTLRSPEASQIRDKPTKMCLKHRGQAYEETWLQSSCVLDNQSYRDGVIGEPHHAEDSCHRGTLQPQKPPDSMTSTSKATAGAKGGELYRNSGSQLPTALESQAGGVRVTKGPDRGGQPFNETSRQQLKLLEDQTLRDLKLRSSYSGKVETQLPTLSENLNIEDRYSRKPSYKEADWPERRAL", "length": 369 }, "evidence": [ { "id": "F1SV92", "url": "https://omabrowser.org/oma/group/F1SV92/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KMZ1-1", "protein_name": "IQ domain-containing protein C", "gene_name": "IQCC", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPELLVRKVSALQACVRGFLVRRQFQSLRAEYEAIVREVEGDLGTLQWTEGRIPRPRFLPEKAKSHQTWKAGDRVANPEQGLWNHFPCEESEGEATWEEMVLKKSGESSANQGSLCRDHSSWLQMKQNRKPSQEKTRDTTRMENPEATDQRLPHSQPQLQELQYHRSHLAMELLWLQQAINSRKEYLLLKQTLRSPEAGPIREEPRVFLEHGEQACERDQSQPSAPLEDQSYRDRTTGELEQEDDSCHRVKSPHRSPGSLATTQKNIAGAKCREPCYSKSGPPSSIPSNSQALGDRLTKGPDDGRQTFGGTCLLQMKILEDQTPRGLKPRNHCPRKSRTQLSALYEDSNIKEMSPRKLDHKEPDCRTVRTQELGLSEDHIIWDGTLGGPEHSVLDLWRTKPPKGQAPTDRSSRDGTSNEPSHEGQKKQRTIPWRSKSPEILSSTKAGCTGEEQWRGRPWKTEPPG", "length": 466 }, "evidence": [ { "id": "F1SV92", "url": "https://omabrowser.org/oma/group/F1SV92/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 199, "end_pos": 201, "annotation": "n_glycosylation_sequon" }, { "start_pos": 204, "end_pos": 206, "annotation": "n_glycosylation_sequon" }, { "start_pos": 327, "end_pos": 329, "annotation": "n_glycosylation_sequon" }, { "start_pos": 422, "end_pos": 424, "annotation": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SV96-1", "uniprot_ac": "F1SV96", "uniprot_id": "F1SV96_PIG", "mass": { "chemical_mass": 117383.0, "monoisotopic_mass": 117383.0 }, "refseq": {}, "gene_names": [ { "name": "SPOCD1", "type": "recommended", "evidence": [ { "id": "F1SV96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ] } ], "protein_names": [ { "name": "SPOC domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "F1SV96", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SV96/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Protein adapter that acts as an essential executor of PIWIL4-piRNA pathway directed transposon DNA methylation and silencing in the male embryonic germ cells. Recruited to young transposons, which are specifically marked with histone H3 trimethylated at both 'Lys-4' and 'Lys-9' (H3K4me3K9me3), via its association with SPIN1 chromatin reader, and associates with the de novo DNA methylation machinery and repressive chromatin remodeling complexes. Following this, PIWIL4 engages with nascent transposable element transcript to direct piRNA-directed DNA methylation. Not required for piRNA biosynthesis.", "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96#function" }, { "database": "UniProtKB", "id": "ARBA00059288", "url": "https://www.uniprot.org/uniprotkb/ARBA00059288#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SPOCD1", "url": "https://www.uniprot.org/uniprotkb/F1SV96", "locus": { "chromosome": "6", "start_pos": 88323080, "end_pos": 88349963, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003606", "url": "https://www.ensembl.org/id/ENSSSCG00000003606" } ] } } ], "crossref": [ { "id": "F1SV96", "url": "https://alphafold.ebi.ac.uk/entry/F1SV96", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003606", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003606", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd21540", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd21540", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR003618", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003618", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012921", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012921", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036575", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036575", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR11477", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11477", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11477:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11477:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07500", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07500", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07744", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07744", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SV96-1", "url": "https://www.uniprot.org/uniprotkb/F1SV96-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "QHVWGTAPCRRSGDPAPSLKHSPNRLPVRPGPTPAGGSSGAPVWAGSRKRVHPEEALQGASCQAVGAPGASVEAKARLVVPALQAVGQRQDLLPGPRLHIQLPTVPAQGRAQTCKRLLVSLHDILAGSGPRNLWSMSVGARKKSRMCEAPLEGEEGAGGLCLGQSPGGDKPQSGGGLSHGADVESVGVSCRPLSCKDTGSGPADPGGSWEECASGIEKLESLPIAGDGAPPDTPCAPVEPPVSSGGEFPQPATQAPPQSPALCLGESGKASPEWQEAGQSLGAGGEDGPDTSHDQEELEVEAQPVSGGRPEQGLTASTDTSASSLEPAASKARSGQAAGQRRYKYATKLRRGPVPCAQDGDTERCSDHSNQEQPEESSPGGCPKLEAMKMAYGVKHVCYVGSTAVIHLLGGIRDGQAGDSLSPKLEVLEDMMEISSASPAQRPRRKDRPMIQGPKGNQPPVLPQRGGGCWPPGLYFQNSRHPGFPRVGSSDSLPTAQLWPQQEKLPLDAGVRSTVVRAMREVLWSRLQELPDLVLSEGAVEGLAAGIEAALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQLAPQELARWRDQEEKRGLEIIEQLQKEPCSLPASKLTHKGEVEIPRDVDQTLILEDLVVSESPSWWPWQHEDTTEQHKHHFQDSSCRICMGWKPSCELPSSKTATGMGDSAFQRAPSLVPAASPEMPQAREKSPMESQDRLQMPPGPTKVLSNQLPWEGSLDMFSIKRFRVRAQLVSGHSCQLIQALPQVIRSAGCIPPNTVWDFLASVCPAKAKDVCVVRLCPQGSPDTQNCHLLYSYLNNKQRHGLVAVEQVGVVLLPLPAFQPLPSRLRPLGGPGLEATHPSLLLAVLFPKAGLPATAEYSPLTGKVRRMTSFNRKVEMKCYQLEDRRPNVALKGSSCLGGALQQSQGKGSLAPRGICTWQSAPRGRGRLSGEPETWQGVGRGQRPPKPDWCQSWHPYAAVPAGRGQHLHSASCPHQKLLQHLESLVAMSHQLQASLRSPGQEQLLQPPVQSSAGAGVLGLLCKPPAAPEPPGLAPNSSLGPTDGADSECPLPGET", "length": 1101, "header": "tr|F1SV96-1|F1SV96_PIG Isoform 1 of SPOC domain-containing protein 1 OS=Sus scrofa OX=9823 GN=SPOCD1 PE=4 SV=3 CANONICAL=F1SV96-1" }, "isoforms": [ { "isoform_ac": "F1SV96-1", "url": "https://www.uniprot.org/uniprotkb/F1SV96/entry#F1SV96-1", "sequence": { "sequence": "QHVWGTAPCRRSGDPAPSLKHSPNRLPVRPGPTPAGGSSGAPVWAGSRKRVHPEEALQGASCQAVGAPGASVEAKARLVVPALQAVGQRQDLLPGPRLHIQLPTVPAQGRAQTCKRLLVSLHDILAGSGPRNLWSMSVGARKKSRMCEAPLEGEEGAGGLCLGQSPGGDKPQSGGGLSHGADVESVGVSCRPLSCKDTGSGPADPGGSWEECASGIEKLESLPIAGDGAPPDTPCAPVEPPVSSGGEFPQPATQAPPQSPALCLGESGKASPEWQEAGQSLGAGGEDGPDTSHDQEELEVEAQPVSGGRPEQGLTASTDTSASSLEPAASKARSGQAAGQRRYKYATKLRRGPVPCAQDGDTERCSDHSNQEQPEESSPGGCPKLEAMKMAYGVKHVCYVGSTAVIHLLGGIRDGQAGDSLSPKLEVLEDMMEISSASPAQRPRRKDRPMIQGPKGNQPPVLPQRGGGCWPPGLYFQNSRHPGFPRVGSSDSLPTAQLWPQQEKLPLDAGVRSTVVRAMREVLWSRLQELPDLVLSEGAVEGLAAGIEAALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQLAPQELARWRDQEEKRGLEIIEQLQKEPCSLPASKLTHKGEVEIPRDVDQTLILEDLVVSESPSWWPWQHEDTTEQHKHHFQDSSCRICMGWKPSCELPSSKTATGMGDSAFQRAPSLVPAASPEMPQAREKSPMESQDRLQMPPGPTKVLSNQLPWEGSLDMFSIKRFRVRAQLVSGHSCQLIQALPQVIRSAGCIPPNTVWDFLASVCPAKAKDVCVVRLCPQGSPDTQNCHLLYSYLNNKQRHGLVAVEQVGVVLLPLPAFQPLPSRLRPLGGPGLEATHPSLLLAVLFPKAGLPATAEYSPLTGKVRRMTSFNRKVEMKCYQLEDRRPNVALKGSSCLGGALQQSQGKGSLAPRGICTWQSAPRGRGRLSGEPETWQGVGRGQRPPKPDWCQSWHPYAAVPAGRGQHLHSASCPHQKLLQHLESLVAMSHQLQASLRSPGQEQLLQPPVQSSAGAGVLGLLCKPPAAPEPPGLAPNSSLGPTDGADSECPLPGET", "length": 1101, "header": "tr|F1SV96-1|F1SV96_PIG Isoform 1 of SPOC domain-containing protein 1 OS=Sus scrofa OX=9823 GN=SPOCD1 PE=4 SV=3 CANONICAL=F1SV96-1" }, "locus": { "chromosome": "6", "start_pos": 88349963, "end_pos": 88323289, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004001.4", "url": "https://www.ensembl.org/id/ENSSSCT00000004001.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003910.3", "url": "https://www.ensembl.org/id/ENSSSCP00000003910.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1088, "start_aa": "Thr", "end_pos": 1088, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1088", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 33, "start_aa": "Thr", "end_pos": 33, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr33", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ], "pmid": "" }, { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ], "pmid": "" }, { "name": "cell differentiation", "id": "GO:0030154", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030154", "evidence": [ { "database": "UniProtKB", "id": "F1SV96", "url": "https://www.uniprot.org/uniprotkb/F1SV96" } ], "pmid": "" }, { "name": "transposable element silencing by 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"https://www.ncbi.nlm.nih.gov/protein/XP_003132124", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F2Z5C4", "url": "https://www.uniprot.org/uniprotkb/F2Z5C4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5C4-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5C4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNLVDLWLTRSLSMCLLLQSFVLMILCFHSASMCPKGCLCSSSGGLNVTCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRSMASNHETAHNVICKTSVLDEHAGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVISYVVYYVRQNQEDARRHLEYLKSLPSRQKKADEPDDISTVV", "length": 259, "header": "tr|F2Z5C4-1|F2Z5C4_PIG Isoform 1 of Leucine rich repeat containing 3B OS=Sus scrofa OX=9823 GN=LRRC3B PE=3 SV=1 CANONICAL=F2Z5C4-1" }, "isoforms": [ { "isoform_ac": "F2Z5C4-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5C4/entry#F2Z5C4-1", "sequence": { "sequence": 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"database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BYY6-1", "protein_name": "Leucine-rich repeat-containing protein 3", "gene_name": "LRRC3B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MHLVDLWLTRSLSMCLLLQSFVLMILCFHSASMCPKGCLCSHSGGLNVSCSNANLKEIPRDLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDLSDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRSMAVNHETANNVICKTSVLDEHAGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVISYVVYYVRQNQEDARRHLEYLKSLPSRQKKPDEADDISTVV", "length": 259 }, "evidence": [ { "id": "F2Z5C4", "url": "https://omabrowser.org/oma/group/F2Z5C4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H4L3-1", "protein_name": "Leucine-rich repeat-containing protein 3B", "gene_name": "Lrrc3b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": 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}, "isoforms": [ { "isoform_ac": "A0A8W4FBY8-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5E8/entry#A0A8W4FBY8-1", "sequence": { "sequence": "MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYIRFPWFNDHGHSGDLFFPYGDASKFNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPSIVLLLQCDIQK", "length": 194, "header": "tr|A0A8W4FBY8-1|A0A8W4FBY8_PIG Computationally mapped isoform of Visinin-like protein 1 OS=Sus scrofa OX=9823 GN=VSNL1 PE=1 SV=1 CANONICAL=F2Z5E8-1" }, "locus": { "chromosome": "3", "start_pos": 120248220, "end_pos": 120178678, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093167.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093167.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076917.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076917.1" } ] } }, { "isoform_ac": "F2Z5E8-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5E8/entry#F2Z5E8-1", "sequence": { "sequence": "MGKQNSKLAPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLEEFQQLYVKFFPYGDASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVEMLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDKIFSKMDKNKDDQITLDEFKEAAKSDPSIVLLLQCDIQK", "length": 191, "header": "tr|F2Z5E8-1|F2Z5E8_PIG Isoform 1 of Visinin-like protein 1 OS=Sus scrofa OX=9823 GN=VSNL1 PE=1 SV=3 CANONICAL=F2Z5E8-1" }, "locus": { "chromosome": "3", "start_pos": 120248220, "end_pos": 120178678, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009426.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009426.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009184.3", "url": "https://www.ensembl.org/id/ENSSSCP00000009184.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., 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[9823]" } ], "gene": [ { "name": "S100A16", "url": "https://www.uniprot.org/uniprotkb/F2Z5M4", "locus": {} } ], "crossref": [ { "id": "cd05022", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05022", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100155146", "url": "https://www.ncbi.nlm.nih.gov/gene/100155146", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001751", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001751", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002048", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002048", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011992", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011992", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013787", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013787", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018247", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018247", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100155146", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155146", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DCYTDLE", "url": "https://omabrowser.org/oma/group/DCYTDLE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F2Z5M4", "url": "https://www.orthodb.org/?gene=F2Z5M4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11639", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11639", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11639:SF76", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11639:SF76", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01023", "url": 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"MADSYTELEKAVVVLVENFYKYVSKHSLVKNKISKSSFRKMLQKELNHMLTDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGITSPIANLIRQQEQQSSS", "length": 103, "header": "tr|F2Z5M4-1|F2Z5M4_PIG Isoform 1 of Protein S100 OS=Sus scrofa OX=9823 GN=S100A16 PE=1 SV=1 CANONICAL=F2Z5M4-1" }, "locus": { "chromosome": "4", "start_pos": 96036911, "end_pos": 96036348, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000036447.4", "url": "https://www.ensembl.org/id/ENSSSCT00000036447.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080041.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080041.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F2Z5M4", "url": "https://www.uniprot.org/uniprotkb/F2Z5M4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100155146", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100155146", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A8L3-1", "protein_name": "S100 calcium binding protein A16", "gene_name": "S100A16", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": 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"sequence": "MADCYTELEKAVVVLVENFYKYVSKHSLVKNKISKSSFRKMLQRELNHMLTDTGNRKAADKLIQNLDANHDGRICFDEYWTMIGGITSPMANLIRQQECQQESQQECQQESQQESQQESQQGSS", "length": 124 }, "evidence": [ { "id": "F2Z5M4", "url": "https://omabrowser.org/oma/group/F2Z5M4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F2Z5M4", "url": "https://www.uniprot.org/uniprotkb/F2Z5M4" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F2Z5M4", "url": "https://www.uniprot.org/uniprotkb/F2Z5M4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "identical protein binding", "id": "GO:0042802", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042802", "evidence": [ { "database": "UniProtKB", "id": "F2Z5M4", "url": "https://www.uniprot.org/uniprotkb/F2Z5M4" } ], "pmid": "" }, { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "F2Z5M4", "url": "https://www.uniprot.org/uniprotkb/F2Z5M4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F2Z5M4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5M4" }, { "id": "PS50222", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50222" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EF-hand", "eco_id": "ECO_0000259", "start_pos": 54, "end_pos": 89, "start_aa": "Gly", "end_aa": "Pro", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F2Z5N8-1", "uniprot_ac": "F2Z5N8", "uniprot_id": "F2Z5N8_PIG", "mass": { "chemical_mass": 13624.0, "monoisotopic_mass": 13624.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Uncharacterized protein", "type": "synonym", "evidence": [ { "id": "F2Z5N8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5N8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F2Z5N8", "url": "https://www.uniprot.org/uniprotkb/F2Z5N8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/F2Z5N8", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000034749", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000034749", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "LNCSCAI", "url": "https://omabrowser.org/oma/group/LNCSCAI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F2Z5N8", "url": "https://www.uniprot.org/uniprotkb/F2Z5N8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5N8-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5N8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MFLPFISYKEIDTTAVHTIYWLHPLVLAVFGDIMLERAPGVRGLTLADSVPSLHCGLPADFLNCSCAINNVLTCFSLFVNVLHYRLHFLPYCIEKEKRLGLLLHILSFYTFIFLGMVRF", "length": 119, "header": "tr|F2Z5N8-1|F2Z5N8_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=F2Z5N8-1" }, "isoforms": [ { "isoform_ac": "F2Z5N8-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5N8/entry#F2Z5N8-1", "sequence": { "sequence": "MFLPFISYKEIDTTAVHTIYWLHPLVLAVFGDIMLERAPGVRGLTLADSVPSLHCGLPADFLNCSCAINNVLTCFSLFVNVLHYRLHFLPYCIEKEKRLGLLLHILSFYTFIFLGMVRF", "length": 119, "header": "tr|F2Z5N8-1|F2Z5N8_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=F2Z5N8-1" }, "locus": { "chromosome": "1", "start_pos": 261230028, "end_pos": 261229672, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093474.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093474.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081342.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081342.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F2Z5N8", "url": "https://www.uniprot.org/uniprotkb/F2Z5N8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 63, "end_pos": 65, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 63, "end_pos": 65 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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}, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F2Z5S9-1", "uniprot_ac": "F2Z5S9", "uniprot_id": "F2Z5S9_PIG", "mass": { "chemical_mass": 36011.0, "monoisotopic_mass": 36011.0 }, "refseq": { "ac": "XP_003121694", "name": "ankyrin repeat and SOCS box protein 7", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121694" }, "gene_names": [ { "name": "ASB7", "type": "recommended", "evidence": [ { "id": "F2Z5S9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ] }, { "name": "ASB7", "type": "synonym", "evidence": [ { "id": "XP_003121694", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121694" } ] } ], "protein_names": [ { "name": "Ankyrin repeat and SOCS box protein 7", "type": "recommended", "evidence": [ { "id": "F2Z5S9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9/entry#names_and_taxonomy" } ] }, { "name": "ankyrin repeat and SOCS box protein 7", "type": "synonym", "evidence": [ { "id": "XP_003121694", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121694" } ] } ], "function": [ { "annotation": "Substrate-recognition component of a cullin-5-RING E3 ubiquitin-protein ligase complex (ECS complex, also named CRL5 complex), which mediates the ubiquitination and subsequent proteasomal degradation of target proteins, such as LZTS1, PSRC1 and SUV39H1. The ECS(ASB7) complex acts as a negative regulator of H3K9me3 histone mark by mediating ubiquitination and degradation of SUV39H1: ASB7 is recruited to heterochromatin by CBX5 (HP1 alpha), where it associates with SUV39H1, promoting the ubiquitin-proteasome-mediated degradation of SUV39H1. During mitosis, ASB7 is phosphorylated and inactivated, allowing SUV39H1 activity. The ECS(ASB7) complex also plays a role in spindle dynamics and genome integrity by targeting the mitotic progression protein PSRC1 for proteasomal degradation in a cell cycle-dependent manner. Also participates in meiosis by mediating the proper attachment between kinetochores and microtubules.", "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9#function" }, { "database": "UniProtKB", "id": "ARBA00094274", "url": "https://www.uniprot.org/uniprotkb/ARBA00094274#function" }, { "database": "UniProtKB", "id": "A0A5G2RD97", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RD97#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ASB7", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9", "locus": { "chromosome": "1", "start_pos": 139240185, "end_pos": 139191572, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004821", "url": "https://www.ensembl.org/id/ENSSSCG00000004821" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004821", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004821", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03726", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03726", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100519936", "url": "https://www.ncbi.nlm.nih.gov/gene/100519936", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001496", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001496", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036036", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036036", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036770", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036770", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037326", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037326", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519936", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519936", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CNGWTLL", "url": "https://omabrowser.org/oma/group/CNGWTLL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F2Z5S9", "url": "https://www.orthodb.org/?gene=F2Z5S9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24173", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24173", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24173:SF74", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24173:SF74", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24198:SF165", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24198:SF165", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07525", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07525", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003121694", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121694", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2RD97", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RD97", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RD97-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RD97-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F2Z5S9-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLHHHCRRNPELQEELQIQAAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQEVTRQPRNLQDLCRIKIRQCIGLQNLKLLDELPIAKVMKDYLKHKFDDI", "length": 318, "header": "tr|F2Z5S9-1|F2Z5S9_PIG Isoform 1 of Ankyrin repeat and SOCS box protein 7 OS=Sus scrofa OX=9823 GN=ASB7 PE=3 SV=1 CANONICAL=F2Z5S9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RD97-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9/entry#A0A5G2RD97-1", "sequence": { "sequence": "MTRDLAAPRPPVPPVAGSLRPGARQPPALSLQTGTAPPPEPGLPPCTPAPRLPGGQHRRLRSARLCGCWPDWGREAPRRTRNSRVRPCLGCFFNGEVARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQEVTRQPRNLQDLCRIKIRQCIGLQNLKLLDELPIAKVMKDYLKHKFDDI", "length": 360, "header": "tr|A0A5G2RD97-1|A0A5G2RD97_PIG Computationally mapped isoform of Ankyrin repeat and SOCS box protein 7 OS=Sus scrofa OX=9823 GN=ASB7 PE=3 SV=1 CANONICAL=F2Z5S9-1" }, "locus": { "chromosome": "1", "start_pos": 139236929, "end_pos": 139191654, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072354.2", "url": "https://www.ensembl.org/id/ENSSSCT00000072354.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068669.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068669.1" } ] } }, { "isoform_ac": "F2Z5S9-1", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9/entry#F2Z5S9-1", "sequence": { "sequence": "MLHHHCRRNPELQEELQIQAAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQEVTRQPRNLQDLCRIKIRQCIGLQNLKLLDELPIAKVMKDYLKHKFDDI", "length": 318, "header": "tr|F2Z5S9-1|F2Z5S9_PIG Isoform 1 of Ankyrin repeat and SOCS box protein 7 OS=Sus scrofa OX=9823 GN=ASB7 PE=3 SV=1 CANONICAL=F2Z5S9-1" }, "locus": { "chromosome": "1", "start_pos": 139236929, "end_pos": 139201377, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005323.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005323.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005193.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005193.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519936", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519936", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZVT6-1", "protein_name": "Ankyrin repeat and SOCS box protein 7", "gene_name": "Asb7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLHHHCRRNPELQEELQIQAAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVRILLDHSANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQDVTNSVSPLGLGRRLSCSVCPASMETSISLDKQHPDKAGHGSVLL", "length": 314 }, "evidence": [ { "id": "F2Z5S9", "url": "https://omabrowser.org/oma/group/F2Z5S9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1B9S2-1", "protein_name": "Ankyrin repeat and SOCS box protein 7", "gene_name": "ASB7", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLHHHCRRNPELQEELQIQAAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQEVTRQPRNLQDLCRIKIRQCIGLQNLKLLDELPIAKVMKDYLKHKFDDI", "length": 318 }, "evidence": [ { "id": "F2Z5S9", "url": "https://omabrowser.org/oma/group/F2Z5S9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3H597-1", "protein_name": "Ankyrin repeat and SOCS box protein 7", "gene_name": "Asb7", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLHHHCRRNPELQEELQIQAAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQEVTRQPRTLQDLCRIKIRQCIGLQNLKLLDELPIAKVMKDYLKHKFDDI", "length": 318 }, "evidence": [ { "id": "F2Z5S9", "url": "https://omabrowser.org/oma/group/F2Z5S9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q91ZU0-1", "protein_name": "Ankyrin repeat and SOCS box protein 7", "gene_name": "Asb7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLHHHCRRNPELQEELQIQAAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQDVTRQPRTLQDLCRIKIRQCIGLQNLKLLDELPIAKVMKDYLKHKFDDI", "length": 318 }, "evidence": [ { "id": "F2Z5S9", "url": "https://omabrowser.org/oma/group/F2Z5S9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H672-1", "protein_name": "Ankyrin repeat and SOCS box protein 7", "gene_name": "ASB7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLHHHCRRNPELQEELQIQAAVAAGDVHTVRKMLEQGYSPNGRDANGWTLLHFSAARGKERCVRVFLEHGADPTVKDLIGGFTALHYAAMHGRARIARLMLESEYRSDIINAKSNDGWTPLHVAAHYGRDSFVRLLLEFKAEVDPLSDKGTTPLQLAIIRERSSCVKILLDHNANIDIQNGFLLRYAVIKSNHSYCRMFLQRGADTNLGRLEDGQTPLHLSALRDDVLCARMLYNYGADTNTRNYEGQTPLAVSISISGSSRPCLDFLQEVTRQPRNLQDLCRIKIRQCIGLQNLKLLDELPIAKVMKDYLKHKFDDI", "length": 318 }, "evidence": [ { "id": "F2Z5S9", "url": "https://omabrowser.org/oma/group/F2Z5S9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ], "pmid": "" }, { "name": "protein ubiquitination", "id": "GO:0016567", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016567", "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ], "pmid": "" }, { "name": "proteasome-mediated ubiquitin-dependent protein catabolic process", "id": "GO:0043161", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043161", "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ], "pmid": "" }, { "name": "regulation of heterochromatin organization", "id": "GO:0120261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120261", "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Cul5-RING ubiquitin ligase complex", "id": "GO:0031466", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031466", "evidence": [ { "database": "UniProtKB", "id": "F2Z5S9", "url": "https://www.uniprot.org/uniprotkb/F2Z5S9" } ], "pmid": "" }, { "name": "heterochromatin", "id": "GO:0000792", "url": 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Expression" ] }, { "id": "100144512", "url": "https://www.ncbi.nlm.nih.gov/gene/100144512", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "MSQHQVS", "url": "https://omabrowser.org/oma/group/MSQHQVS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F6PT57", "url": "https://www.orthodb.org/?gene=F6PT57", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47166", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47166", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47166:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47166:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "XP_005673122", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005673122", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F6PT57", "url": "https://www.uniprot.org/uniprotkb/F6PT57", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F6PT57-1", "url": "https://www.uniprot.org/uniprotkb/F6PT57-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEVPELTRPASPARDQPAPASATPGAPGGQASPRLPLGPIILPPEQGLAPTVLLKALPIPLYHTVPPGGFQPRAPLVTGSLDGASVPFILSPLLQPEGPGPTAVGKSAAPALTVNIVGTLPVLSPGLGPTLGSPGKVRNAGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCATCGIAFKTQSNLYKHRRTQTHLNNSRQSSESDGGGGAGGGGGSGGSLLEEGGRAGEPPGAQGAPSERPLSPGAPASGHCPVPSEHLPPVAKNLEPKLEAVPCSGSTSDVREAPLDSAPHLQPASSLPRRKLPEPRTPTAGRPSSQQAQPATSAEKPGDAKAAEGRLRKCESTDSGYLSRSDSAEQPPAAGSPLHSLSEHSAESEGEGGPGPGRAERAAGLELEKRRLEERIARLISHNQAVVDDPQLDHVRPRKTVLSKQGSIDLPMPYTYKDSFHFDLRPPEPGRRLPAALRAARSTCTAPGRARPVVFHSVPTQLSTSAECVPVTRSNSLPFVEGTGTTWQEPPDPRDAWPRRQKPLSPRPAPARLADVPSGHPRALVRQVAVEDLLCPPTGDTAASVEDPDGNRPAVGEEAANKGPAAGKRRGQKKLRMFSQDKWQVYGNETFKRIYQKMKASHHAGKKAAEVTGGGATQPACPLREEAAECQGAAPSQEERGAPVGGDSSMGAKPAPRASSPALEGFLAAEPIRQRETVGRAGGSDQPCLTRAASPPTLRCREALSLGSKSPLPPPSGRLELGCQLLPAPASPKGGDPEAPRPGVPTPKLEGSTCGGGGSEACPQAHVVLRRPGGGSQEPQATEDRIPSERKKPKVEELSFPESPGAGGETLGGPRQAASPPPQKQDGDPAEKPEGLPGSGDCMVKRRAGQLAEPREASGALSAAASGAPRLAGVWDTEPLLRSAAASQPLAPCILAGPVDPTFPPQYLLRLPQGESQLPPPAPQKPAQGQDPLCKAGWPEGSASFVESGLGALLTPGPSSGQAPGGADSCGGGPVRSRPWDRRKGVQGEDKGALDTGTPEAGIPRGTVSFLPTPACDFWRSEARDTQQLCRSSALVRARSSGCVLNPWEPRRELGGPSECTPEGLPSGPPAGLGPCCSHQPRAFLSALTPLGWPELASGTHSETPGSGGAQGPFPSLRAEPRLTWCCLSRSLPLPVEQKEKDASVYLALHFPSSSISDGGPDAWPTSRAVPGGWTRTSPGEGGQTQTLKLPHPAAPGLPPQDRPSLELEVRKGRPRRRVKMSRGSSKQRKAHSRSRRYKGIFLHSRVQLRASRLRKPRWVLRKDCPPPPLKGPDPCGTRGQASSEVAGPSPSGEPACVTSESSLCGGNGEKEEEGGRHSSRRCCPNTGASAVRETATATVKEISPPACEPRDSCPPDTAVGSESSLQADSLVAVAKDSLLAGGKALDSGLLELHRLPSQEGVSADSTPGTFSDALALSSAESKGTPLRHDLATSAAALRPSPEARAGCAALGLHSVDPQDHSGAAGQTLAQNSPDRKMMPEGLSASPEKPSPGQRLSGSVPPGSPGETHLETAASGPGAASSPPEEGKLKTRFPSGGCHGCGKGLVPCPPLGSDSGGCQGSGFITPKAAAVPSSPGQPPEVPAAPLKALRKRSLEGMRKQTRVEFSDTSSDDEDRLVIEI", "length": 1649, "header": "tr|F6PT57-1|F6PT57_PIG Isoform 1 of Zinc finger protein 831 OS=Sus scrofa OX=9823 GN=ZNF831 PE=4 SV=1 CANONICAL=F6PT57-1" }, "isoforms": [ { "isoform_ac": "F6PT57-1", "url": "https://www.uniprot.org/uniprotkb/F6PT57/entry#F6PT57-1", "sequence": { "sequence": "MEVPELTRPASPARDQPAPASATPGAPGGQASPRLPLGPIILPPEQGLAPTVLLKALPIPLYHTVPPGGFQPRAPLVTGSLDGASVPFILSPLLQPEGPGPTAVGKSAAPALTVNIVGTLPVLSPGLGPTLGSPGKVRNAGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCATCGIAFKTQSNLYKHRRTQTHLNNSRQSSESDGGGGAGGGGGSGGSLLEEGGRAGEPPGAQGAPSERPLSPGAPASGHCPVPSEHLPPVAKNLEPKLEAVPCSGSTSDVREAPLDSAPHLQPASSLPRRKLPEPRTPTAGRPSSQQAQPATSAEKPGDAKAAEGRLRKCESTDSGYLSRSDSAEQPPAAGSPLHSLSEHSAESEGEGGPGPGRAERAAGLELEKRRLEERIARLISHNQAVVDDPQLDHVRPRKTVLSKQGSIDLPMPYTYKDSFHFDLRPPEPGRRLPAALRAARSTCTAPGRARPVVFHSVPTQLSTSAECVPVTRSNSLPFVEGTGTTWQEPPDPRDAWPRRQKPLSPRPAPARLADVPSGHPRALVRQVAVEDLLCPPTGDTAASVEDPDGNRPAVGEEAANKGPAAGKRRGQKKLRMFSQDKWQVYGNETFKRIYQKMKASHHAGKKAAEVTGGGATQPACPLREEAAECQGAAPSQEERGAPVGGDSSMGAKPAPRASSPALEGFLAAEPIRQRETVGRAGGSDQPCLTRAASPPTLRCREALSLGSKSPLPPPSGRLELGCQLLPAPASPKGGDPEAPRPGVPTPKLEGSTCGGGGSEACPQAHVVLRRPGGGSQEPQATEDRIPSERKKPKVEELSFPESPGAGGETLGGPRQAASPPPQKQDGDPAEKPEGLPGSGDCMVKRRAGQLAEPREASGALSAAASGAPRLAGVWDTEPLLRSAAASQPLAPCILAGPVDPTFPPQYLLRLPQGESQLPPPAPQKPAQGQDPLCKAGWPEGSASFVESGLGALLTPGPSSGQAPGGADSCGGGPVRSRPWDRRKGVQGEDKGALDTGTPEAGIPRGTVSFLPTPACDFWRSEARDTQQLCRSSALVRARSSGCVLNPWEPRRELGGPSECTPEGLPSGPPAGLGPCCSHQPRAFLSALTPLGWPELASGTHSETPGSGGAQGPFPSLRAEPRLTWCCLSRSLPLPVEQKEKDASVYLALHFPSSSISDGGPDAWPTSRAVPGGWTRTSPGEGGQTQTLKLPHPAAPGLPPQDRPSLELEVRKGRPRRRVKMSRGSSKQRKAHSRSRRYKGIFLHSRVQLRASRLRKPRWVLRKDCPPPPLKGPDPCGTRGQASSEVAGPSPSGEPACVTSESSLCGGNGEKEEEGGRHSSRRCCPNTGASAVRETATATVKEISPPACEPRDSCPPDTAVGSESSLQADSLVAVAKDSLLAGGKALDSGLLELHRLPSQEGVSADSTPGTFSDALALSSAESKGTPLRHDLATSAAALRPSPEARAGCAALGLHSVDPQDHSGAAGQTLAQNSPDRKMMPEGLSASPEKPSPGQRLSGSVPPGSPGETHLETAASGPGAASSPPEEGKLKTRFPSGGCHGCGKGLVPCPPLGSDSGGCQGSGFITPKAAAVPSSPGQPPEVPAAPLKALRKRSLEGMRKQTRVEFSDTSSDDEDRLVIEI", "length": 1649, "header": "tr|F6PT57-1|F6PT57_PIG Isoform 1 of Zinc finger protein 831 OS=Sus scrofa OX=9823 GN=ZNF831 PE=4 SV=1 CANONICAL=F6PT57-1" }, "locus": { "chromosome": "17", "start_pos": 59379648, "end_pos": 59311925, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008253.6", "url": "https://www.ensembl.org/id/ENSSSCT00000008253.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008034.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008034.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 102, "start_aa": "Thr", "end_pos": 102, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr102", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1042, "start_aa": "Thr", "end_pos": 1042, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1042", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1436, "start_aa": "Thr", "end_pos": 1436, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1436", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 23, "start_aa": "Thr", "end_pos": 23, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr23", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F6PT57", "url": "https://www.uniprot.org/uniprotkb/F6PT57" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JZX4-1", "protein_name": "Zinc finger protein 831", "gene_name": "Zfp831", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METSEPTHPPPSSTDQQASVPGIPGGPGGQASPRLTLGPVILPPEQGLAPTVFLKAWPVPLYHTVPPGGLQPRAPLVTGSLEGASVPFILSPLLQPEGPSATQVGKPATPALTVNIVGTLPVLSPGVGSALVSTGRVKSTGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCPTCGIAFKTQSNLYKHRRTQTHLNNSRLSLESEGSGSSLLEEGDRPGETASVDSRGDEGAPERALSPSVHPTLAAQNRERKVDSLGATLSHREASVDQTQMVSPEFPLASPQPRRKLPEPKPGFLQRQQETCSEKPWDPRALEGQLRKCESTDSGYLSRSDSVEQPPVASSPLHSLSEHSAESEGEGGPGCSSSGNRAEQGTPGPSLEIEKKKLEERIALLISHNQAVVDDPQLDHVRPRKTVLSKQGSIDLPMPYTYKDSFHFDIRALEPSRRRVALSPALSTFTPLEKARPLFFHSVPTQLSTTVECVPVTRSNSLPFVEGSKLWPEPPRDSQDAVPGVQKALSPRLTSARLGCRPGLTLASIPSGHPRALVRQAAVEDLPCTPTGDPSAVAEDPDGKRAVAKEGVAYKGRASKKCSQRKQRMFSQEKWQVYGNETFKRIYQKMKTNHQGRQKHREVKPAQGTELGLPPPQEQIGGSDDAGLSQDNRIPILGDTTAGAKPGSWRSRPSLEDSLEAESLKQLKAVARVKSSPTLGSTDGLCLSGKSPLLSPSGKLDLGHQLPPMPGPCQGRDLEAPETASPDPSGEVIKETSPGVQTVLRRSSGGSVAPQLAEDKLPSERKRLKVEGLDHQEQPGPLETETSGGSVQADPQPSQKQDSDPREVLGCSNKSILHVSTAPEPSDVSSAASAVALRCLGLEDQDSLLPSVSRTPGLHSLLPAQLQDPGVPTAQSGVSFAPKYLLRLPQGENPLSLVAPGSGKGSDSLCTSTQPVEQALLVGSELGMLQPPGAYSGSGEAGGSPKDPSWSKSRDEKEEAQTGREKRDRTSDSIRGTRRSPDPRTSTIQEIASILSTHTCDIHVAQGVVSKAHAIPCLCTDSPPARARTCGNLLNPWTPSQKLGTPPKNAAEGPPLETKEGLPTCFLSQAYYFLTTFTKPQAISLNQQKLALSHSLGNPRSGEATSSFPSLKAEPQLTWCCLSRSLPLPAEQQRAAPGHLASSLPNRNLQGDSNKTLPESSRGRTQTGRGGEGSTQTPELPYPTVPGLRAEDQVSRPRWRKELWRRRVKTSRENAKQKKLMLQSKRCEGSFWQRAKRLCKPPWLPRRSCLPHRLEGLEPRGTFGRSSAEASGLNVQGEPSCASKDLSVDRRNKDGKGDCSQTSGPTSPATNSKTILETDKSTLKDISPAAGERHDCSQEKEHADGFGLSLQSNMLLAGFQEDLPQGKGLGVEPPGAQLLSSQDQVSIVPNLSFSSDVPQLPSSFRSKGIFPHHDIATSVAAIYVSEGIGTGHKTLGPHGTESCAEEPLARNSPDRRATPDSIPQVLLPGRPSPGKQSPGKTLEIQPSVPNSVGSHQEEARAQADFPLWGQYGCGDLTIQGAASGSESGTCQAEGLITPKTVTAPSNQGQPSEVPEARLRSIRKRSLEGMRKQTRVELSDTSSDDEDRLVIEI", "length": 1621 }, "evidence": [ { "id": "F6PT57", "url": "https://omabrowser.org/oma/group/F6PT57/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A2ADM8-1", "protein_name": "Zinc finger protein 831", "gene_name": "Zfp831", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEASEPTHPTPSATDQPASVPGIPGGLGGQASPRLTLGPVILPPEQGLAPTVFLKALPVPLYHTVPPGGLQPRAPLVTGSLEGASVPFILSPLLQPEGPSATQVGKPATPALTVNIVGTLPVLSSGVGSALVSTGRVKNTGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCPTCGIAFKTQSNLYKHRRTQTHLNNSRLSLESEGSGSSLLEEGDRPGETASVDSRGDEGAPERALSPGALPALAAQNRERKVESAPSLGATLSHREASADHTQMVSPEFSLASPQPRRKLPEPKPCFLQRQQETCSEKPWDPKALEGQLRKCESTDSGYLSRSDSVEQPPVASSPLHSLSEHSAESEGEGGPGCSSSGNRAERGTPGPSLELEKKKLEERIAQLISHNQAVVDDPQLDHVRPRKTVLSKQGSIDLPMPYTYKDSFHFDIRALEPSRRRAALSPARSTFTPLEKARPLFFHSVPTQLSTTVECVPVTRSNSLPFVEGSKLWPEQRDPQDAVPGMQKALSPRPTPARLGCRPGLTLASISSGHPRALVRQAAVEDLPCTPTGDPSAAAEELDGKRAVAKEGVVYKGRASKKCSQRKQRMFSQEKWQVYGNETFKRIYQKMKTNHQGGQKHRQVKQGQGTELDFPPPPPPQKQGGGGEDTGLSQDSRIPILGDTTAGCKLESWGSRPSLEDSLEAESPKQLKVVTRVKSSPTLGSTDSLCLSGKSSLLSPSGKLDLGCQPPPVPTACQAGDLEAPETASPDSSGEAIKETSPGAQTVLRRSSDGSVALQLAEDKLPSERKRLKVEGLDHQEQPGPLEADTSGGSVQADPPPSERQDSDSEELLGCSNKSTLHVTTAPEPSDVSSAASPVALQWPGIGDKDSPLPSVPRTPGLHSLLPAQPQDPGVPNARSGGFFPPKYLLRLPQGENPSPIVAAGPEKGSDSLCTSTQPVEQALLVGSELGMLRPPGAYSGPGEAGGSPDDPSWSRLRDGKEEAQTGREKRDRTKDNILVVGHSPVPITSTTQEIASVLSTHTCDIRVAQDVVSKTHAIHCLCTDSPPARARTYGNLLNPWTSSQKLGIPPKSALEGPPSETKEGLPAFFSSQAHYFLTTFTKPQDISLNQQKPALSHVLGTPRSCEAPSSFPSLKTEPQLTWCCLSRSLPLPAEQRRIAPGHLASSLPNRNLQGDSNKTLPKSNGGRTQTSQGGEVSTQAPELPYPSVPELRAEDQVSRPRWKKEQLWRRKVKTSRENTKQKKLRLHSKRCEGSFWQRAKRLCKPPWLPRRSCLPHRLEGLEPRGTLGRSSAEVAGRNVQGEPSCASKDLSVSHGNKEKEGDCSQTSRPMSPGMSSKTMLEMDKSALKDISPTTGEHNDCSQEKEHAGGSGLSPQSNTFLAVFQEDVPQGKGLDVGPPETQLPPSQDQVSITPNLCFSPDVPELPSSFKPKGTFPHHDVATSVAAICVSAGIRTGRKTLRAHSAESCAEETLARNSPDRRGTPDSIPRVLLPGRPSPGKQSPGQTLEIPSSGPSSVSSLQEEARAQADFPWWGQYGCGDLTVQGAASGSESRTCQAEGLITSKTVTAPSDPGQPSQVPEEAPLRSIRKRSLEGMRKQTRVELSDTSSDDEDRLVIEI", "length": 1628 }, "evidence": [ { "id": "F6PT57", "url": "https://omabrowser.org/oma/group/F6PT57/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1MDR1-1", "protein_name": "Zinc finger protein 831", "gene_name": "ZNF831", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MDVPELACPTSPARDQPAPASGPPGAPGGQASPHLTLGPVILSREQGLAPTVFLKALPIPLYHTVPPGGLQPRAPLVTGSLDGGSLPFLLGPLLQPEGLGPTRAGKPVAPGLTVNIVGALPILSPGLGPALGSPGKVRNAGRYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCATCGIAFKTQSNLYKHRRTQTHLNNSRLSSESDGGGSSLLEEGEKAAEPTGADRALSQRPLSPGTHAAGHCPVPTVHVSLVAKNLDRKLDAVPCRGSTFDIKEAPVDSAPGLPLASPQSRWKLPEPRSPTASRPSSALQQQQVEKPGDSKPSEGRLRKCESTDSGYLSRSDSAEQPPAAGSPLHSLSEHSAESEGEGGPGPGRAERVAGLELEKRRLEERIARLISHNQAVVDDPQLAHVRPRKTVLSKQGSIDLPMPYTYKDSFHFDLRPPGPGRLPAALRAARSTCTPPDRARPLFFHSVPTQLSTGTDCVPVTRSNSLPFVEGTGTWPEPPEPRDSWPQKQKPLSPRPTPARLADAPGGHPRALVRQAAVEDLPCPLTADALAPVEDPEGKRPAAEEGSASKGQAAAKKRGQRKLKMFSQEKWQVYGKDTFKSIYQRAKASHRGGRKATEVTVGGGAALERPLQQEASGGGDTVVGAKPGPWASPPVLAGLLVSEPHKQRETVAGTGGPDQLGSNRAVSPPTLSSGEALCLDSKSPLLPPHEGPELECQQFPASGPLKGGDLEAPRPDSKLEGGTCGGEGTKETCQQAHVVPRGPGGSSGEPKALEDKLPSERKKLKVEELSCQELLGAGGEIPGGPMQTASPPPQNQDTDPGEKPGGLPGSGNSTESVISGNLRWEGPQDTEPPPRPPGCPSQLASHPPAPHTLTDSVDMVFPPQYLLRFPQRDTRPLSPLPQKLDQGQDSICKRRGPEVQTSFAESGQGALLPPCPISGQAPAGEDSCWKYPSWSRSCDQRKGLQREERGGLNAGIPIARALKGSASFLPASMCESWRSGTHDTQEISRSNTVARAGPSGGVLNSWEPTGELGAPSESATQAPSSGSLACCSHQAGSSLSASMAPHWPELALRTNAEPARSCGVQGSFPSLRAEPRLTWCCLSRSLPLPMEQKEKDASVYLGLHLPGGGLQGEGPDAWLVSKTVSGAWTRIRPGDGGQMQMSKLSDPTARGMLSRDRVSEPEWKKRRSRRRAKMPRGSSRWKHLSTHSKRYRGNFLQSRVQLRVTRLRKPHWVLRKDGHPPRAKGPDPCRTQGQASSEMAGVNPSGEPSCVTSESYVCIENREQEEEESGHVSRSFCPNTSLRTIGDTDRPIAKEISSAGEHGAGCPLITAVGSGLSLPSDSLGANDSLPAHSKGLDVGSLETHLLPSQQHISTDPTPCVFSDAQEPSSFVSKGTSLGHDLATSAAAFCPSLGARAGHTTLGIHSVEPQDHSQGEEETLAQSSPDRKTIEEGVSPNLLPGKPSSGQRISGSVTPGSTGKIHLEIPALGPASASSHQEEGKHKSCFPSGGQCGCREGLVPCPLVGPDSVKCQGTGFMALKDDAVPSNPGLPMEVPAASLKTLRKRSLEGMRKQTRVESSDTSSDDEDRLVIEI", "length": 1600 }, "evidence": [ { "id": "F6PT57", "url": "https://omabrowser.org/oma/group/F6PT57/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5JPB2-1", "protein_name": "Zinc finger protein 831", "gene_name": "ZNF831", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEVPEPTCPAPPARDQPAPTPGPPGAPGGQASPHLTLGPVLLPPEQGLAPPTVFLKALPIPLYHTVPPGGLQPRAPLVTGSLDGGNVPFILSPVLQPEGPGPTQVGKPAAPTLTVNIVGTLPVLSPGLGPTLGSPGKVRNAGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCATCGIAFKTQSNLYKHRRTQTHLNNSRLSSESEGAGGGLLEEGDKAGEPPRPEGRGESRCQGMHEGASERPLSPGAHVPLLAKNLDVRTEAAPCPGSAFADREAPWDSAPMASPGLPAASTQPWRKLPEQKSPTAGKPCALQRQQATAAEKPWDAKAPEGRLRKCESTDSGYLSRSDSAEQPHAPCSPLHSLSEHSAESEGEGGPGPGPGVAGAEPGAREAGLELEKKRLEERIAQLISHNQAVVDDAQLDNVRPRKTGLSKQGSIDLPTPYTYKDSFHFDIRALEPGRRRAPGPVRSTWTPPDKSRPLFFHSVPTQLSTTVECVPVTRSNSLPFVEGSRTWLEPREPRDPWSRTQKPLSPRPGPARLGCRSGLSSTDVPSGHPRALVRQAAVEDLPGTPIGDALVPAEDTDAKRTAAREAMAGKGRAGGRKCGQRRLKMFSQEKWQVYGDETFKRIYQKMKASPHGGKKAREVGMGSGAELGFPLQKEAAGSSGTVPTQDRRTPVHEDISAGATPEPWGNPPALEASLVTEPTKHGETVARRGDSDRPRVEEAVSSPALGGRDSPCSGSRSPLVSPNGRLELGWQMPPAPGPLKGGDVEAPRPVWPDPKLEGGARGVGDVQETCLWAQTVLRWPSRGSGEDKLPSERKKLKVEDLHSWKQPEPVSAETPGGPTQPASLSSQKQDADPGEVPGGSKESARQVGEPLESSGASLAAASVALKRVGPRDKATPLHPAAPAPAEHPSLATPPQAPRVLSALADNAFSPKYLLRLPQAETPLPLPIPWGPRHSQDSLCSSGWPEERASFVGSGLGTPLSPSPASGPSPGEADSILEDPSCSRPQDGRKGAQLGGDKGDRMATSRPAARELPISAPGAPREATSSPPTPTCEAHLVQDMEGDSHRIHRLCMGSTLARARLSGDVLNPWVPNWELGEPPGNAPEDPSSGPLVGPDPCSPLQPGSFLTALTRPQGVPPGWPELALSSHSGTSRSHSTRSPHSTQNPFPSLKAEPRLTWCCLSRSVPLPAEQKAKAASVYLAVHFPGSSLRDEGPNGPPGSNGGWTWTSPGEGGPAQMSKFSYPTVPGVMPQHQVSEPEWKKGLPWRAKMSRGNSKQRKLKINPKRYKGNFLQSCVQLRASRLRTPTWVRRRSRHPPALEGLKPCRTPGQTSSEIAGLNLQEEPSCATSESPPCCGKEEKKEGDCRQTLGTLSLGTSSRIVREMDKRTVKDISPSAGEHGDCTTHSTAATSGLSLQSDTCLAVVNDVPLPPGKGLDLGLLETQLLASQDSVSTDPKPYIFSDAQRPSSFGSKGTFPHHDIATSVAAVCISLPVRTDHIAQEIHSAESRDHSQTAGRTLTSSSPDSKVTEEGRAQTLLPGRPSSGQRISDSVPLESTEKTHLEIPASGPSSASSHHKEGRHKTFFPSRGQYGCGEMTVPCPSLGSDGRKRQVSGLITRKDSVVPSKPEQPIEIPEAPSKSLKKRSLEGMRKQTRVEFSDTSSDDEDRLVIEI", 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"F6PTK4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F6PTK4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F6PTK4", "url": "https://www.uniprot.org/uniprotkb/F6PTK4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CIMIP1", "url": "https://www.uniprot.org/uniprotkb/F6PTK4", "locus": { "chromosome": "17", "start_pos": 58383131, "end_pos": 58373175, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000007510", "url": "https://www.ensembl.org/id/ENSSSCG00000007510" } ] } } ], "crossref": [ { "id": "F6PTK4", "url": "https://alphafold.ebi.ac.uk/entry/F6PTK4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000007510", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000007510", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR020339", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020339", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR31909", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31909", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31909:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31909:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14945", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14945", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "F6PTK4", "url": "https://www.uniprot.org/uniprotkb/F6PTK4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F6PTK4-1", "url": "https://www.uniprot.org/uniprotkb/F6PTK4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "PRTRTHRARQDPRLHGAETNQHGSGGAHEPGGPDEIWKYRLKAENEARQNWAQNWGFLTTPLKELIKCEEEASTPKPRIELPERFRIRPVTPVEKYIQVLPSPPVPKTTQGFIGWRSGVPGLNKCLEHDCEIRSCKGAYAKELNWPKQGIH", "length": 151, "header": "tr|F6PTK4-1|F6PTK4_PIG Isoform 1 of Ciliary microtubule inner protein 1 OS=Sus scrofa OX=9823 GN=CIMIP1 PE=4 SV=2 CANONICAL=F6PTK4-1" }, "isoforms": [ { "isoform_ac": "F6PTK4-1", "url": "https://www.uniprot.org/uniprotkb/F6PTK4/entry#F6PTK4-1", "sequence": { "sequence": "PRTRTHRARQDPRLHGAETNQHGSGGAHEPGGPDEIWKYRLKAENEARQNWAQNWGFLTTPLKELIKCEEEASTPKPRIELPERFRIRPVTPVEKYIQVLPSPPVPKTTQGFIGWRSGVPGLNKCLEHDCEIRSCKGAYAKELNWPKQGIH", "length": 151, "header": "tr|F6PTK4-1|F6PTK4_PIG Isoform 1 of Ciliary microtubule inner protein 1 OS=Sus scrofa OX=9823 GN=CIMIP1 PE=4 SV=2 CANONICAL=F6PTK4-1" }, "locus": { "chromosome": "17", "start_pos": 58382800, "end_pos": 58373177, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008225.3", "url": "https://www.ensembl.org/id/ENSSSCT00000008225.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008006.3", "url": "https://www.ensembl.org/id/ENSSSCP00000008006.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F6PTK4", "url": "https://www.uniprot.org/uniprotkb/F6PTK4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cilium", "id": "GO:0005929", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005929", "evidence": [ { "database": "UniProtKB", "id": "F6PTK4", "url": "https://www.uniprot.org/uniprotkb/F6PTK4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F6PTK4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 151, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F6PTK4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F6PTK4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F6PV71-1", "uniprot_ac": "F6PV71", "uniprot_id": "F6PV71_PIG", "mass": { "chemical_mass": 10301.0, "monoisotopic_mass": 10301.0 }, "refseq": {}, "gene_names": [ { "name": "PHEROC", "type": "recommended", "evidence": [ { "id": "F6PV71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F6PV71" } ] } ], "protein_names": [ { "name": "Pheromaxein C subunit", "type": "synonym", "evidence": [ { "id": "F6PV71", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F6PV71/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F6PV71", "url": "https://www.uniprot.org/uniprotkb/F6PV71" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PHEROC", "url": "https://www.uniprot.org/uniprotkb/F6PV71", "locus": { "chromosome": "2", "start_pos": 9375864, "end_pos": 9381800, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000013067", "url": "https://www.ensembl.org/id/ENSSSCG00000013067" } ] } } ], "crossref": [ { "id": "F6PV71", "url": "https://alphafold.ebi.ac.uk/entry/F6PV71", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000013067", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000013067", "database": "Bgee", 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F6Q8N2", "url": "https://www.uniprot.org/uniprotkb/F6Q8N2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F6Q8N2-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8N2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWLVFLLLLWLSPAASNQETGSCSQPQPLCCLEMDHHCKRGSCYCDEFCHVVPDCCPDHHDVCNSRDSHAGSFLPPTELDTMNDRGPSTNGSGHADMSAVTPAAGTTSEGLFWTTDLTEISVPSHIPLETQTLGTQTSDRAFIPGGTISEAETRETKTIFPAAKTRALVKTTPSKSMVVTMPLETPATRSRPMGSEMTTVETVTGKDLLKAVFDTLCTFDSSEEAKTIMVDYLTLAYSAEAKALSSESSTSSDNSVPAIAPQALLPNITALAKALVPSNITILKVINCSFIEIEATATIPGTSDINHSPTGGKALSAPETSALPDSNEDTSHFTRTTLHSAPAEILSTASATVSTTPDSTLTISSTTETETTAAKATPPSGKLMTVSTNFLEGNSTLSVGTSHTKVSEAVTTSTEAWSTVGKATSPAGFSAMVYSLSEVATIMNSTPSETSTTGSTFSGPVPLSRNPLPSAHLTTASSSQVINTTLAKTTASAKTSKMASTAAGKPSRATPTTVPRWTDVTAGRNGGFLLLRLSVVSPEDLTDPTVTERLMQQVLTPPIQVSLLRVRRG", "length": 569, "header": "tr|F6Q8N2-1|F6Q8N2_PIG Isoform 1 of Mucin 20, cell surface associated OS=Sus scrofa OX=9823 GN=MUC20 PE=4 SV=3 CANONICAL=F6Q8N2-1" }, "isoforms": [ { "isoform_ac": "A0A286ZPU5-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8N2/entry#A0A286ZPU5-1", "sequence": { "sequence": "MVAGASDKMGCLWGLALPLFFFCWKAGVPGSFAGPSTNGSGHADMSAVTPAAGTTSEGLFWTTDLTEISVPSHIPLETQTLGTQTSDRAFIPGGTISEAETRETKTIFPAAKTRALVKTTPSKSMVVTMPLETPATRSRPMGSEMTTVETVTGKDLLKAVFDTLCTFDSSEEAKTIMVDYLTLAYSAEAKALSSESSTSSDNSVPAIAPQALLPNITALAKALVPSNITILKVINCSFIEIEATATIPGTSDINHSPTGGKALSAPETSALPDSNEDTSHFTRTTLHSAPAEILSTASATVSTTPDSTLTISSTTETETTAAKATPPSGKLMTVSTNFLEGNSTLSVGTSHTKVSEAVTTSTEAWSTVGKATSPAGFSAMVYSLSEVATIMNSTPSETSTTGSTFSGPVPLSRNPLPSAHLTTASSSQVINTTLAKTTASAKTSKMASTAAGKPSRATPTTVPRWTDVTAGRNGGFLLLRLSVVSPEDLTDPTVTERLMQQVSGLFLCQGSLFICKEGWLKQP", "length": 523, "header": "tr|A0A286ZPU5-1|A0A286ZPU5_PIG Computationally mapped isoform of Mucin 20, cell surface associated OS=Sus scrofa OX=9823 GN=MUC20 PE=4 SV=2 CANONICAL=F6Q8N2-1" }, "locus": { "chromosome": "13", "start_pos": 134265796, "end_pos": 134256678, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000038856.3", "url": "https://www.ensembl.org/id/ENSSSCT00000038856.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000033626.2", "url": "https://www.ensembl.org/id/ENSSSCP00000033626.2" } ] } }, { "isoform_ac": "F6Q8N2-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8N2/entry#F6Q8N2-1", "sequence": { "sequence": "MWLVFLLLLWLSPAASNQETGSCSQPQPLCCLEMDHHCKRGSCYCDEFCHVVPDCCPDHHDVCNSRDSHAGSFLPPTELDTMNDRGPSTNGSGHADMSAVTPAAGTTSEGLFWTTDLTEISVPSHIPLETQTLGTQTSDRAFIPGGTISEAETRETKTIFPAAKTRALVKTTPSKSMVVTMPLETPATRSRPMGSEMTTVETVTGKDLLKAVFDTLCTFDSSEEAKTIMVDYLTLAYSAEAKALSSESSTSSDNSVPAIAPQALLPNITALAKALVPSNITILKVINCSFIEIEATATIPGTSDINHSPTGGKALSAPETSALPDSNEDTSHFTRTTLHSAPAEILSTASATVSTTPDSTLTISSTTETETTAAKATPPSGKLMTVSTNFLEGNSTLSVGTSHTKVSEAVTTSTEAWSTVGKATSPAGFSAMVYSLSEVATIMNSTPSETSTTGSTFSGPVPLSRNPLPSAHLTTASSSQVINTTLAKTTASAKTSKMASTAAGKPSRATPTTVPRWTDVTAGRNGGFLLLRLSVVSPEDLTDPTVTERLMQQVLTPPIQVSLLRVRRG", "length": 569, "header": "tr|F6Q8N2-1|F6Q8N2_PIG Isoform 1 of Mucin 20, cell surface associated OS=Sus scrofa OX=9823 GN=MUC20 PE=4 SV=3 CANONICAL=F6Q8N2-1" }, "locus": { "chromosome": "13", "start_pos": 134281034, "end_pos": 134255265, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000012963.5", "url": "https://www.ensembl.org/id/ENSSSCT00000012963.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000012622.5", "url": "https://www.ensembl.org/id/ENSSSCP00000012622.5" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 101, "start_aa": "Thr", "end_pos": 101, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr101", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F6Q8N2", "url": "https://www.uniprot.org/uniprotkb/F6Q8N2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-8851805", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8851805", "resource": "Reactome", "description": "MET activates RAS signaling" }, { "id": "R-SSC-913709", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913709", "resource": "Reactome", "description": "O-linked glycosylation of mucins" }, { "id": "R-SSC-977068", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-977068", "resource": "Reactome", "description": "Termination of O-glycan biosynthesis" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "hepatocyte growth factor receptor signaling pathway", "id": "GO:0048012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048012", "evidence": [ { "database": "UniProtKB", "id": "F6Q8N2", "url": "https://www.uniprot.org/uniprotkb/F6Q8N2" } ], "pmid": "" } ] } ] }, 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"categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050413", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050413", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23268", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23268", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23268:SF13", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23268:SF13", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23268:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23268:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07654", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07654", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF07686", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07686", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287A079", "url": "https://www.uniprot.org/uniprotkb/A0A287A079", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A079-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A079-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AF37", "url": "https://www.uniprot.org/uniprotkb/A0A287AF37", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AF37-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AF37-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVZ7", "url": "https://www.uniprot.org/uniprotkb/A0A287AVZ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AVZ7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AVZ7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F6Q8R7", 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"header": "tr|A0A287A079-1|A0A287A079_PIG Computationally mapped isoform of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=1 CANONICAL=F6Q8S8-1" }, "locus": { "chromosome": "18", "start_pos": 7553638, "end_pos": 7431872, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063976.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063976.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037137.1", "url": "https://www.ensembl.org/id/ENSSSCP00000037137.1" } ] } }, { "isoform_ac": "A0A287AF37-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8S8/entry#A0A287AF37-1", "sequence": { "sequence": "MRDRAPLNPEVRVWNRQMPRSCSVPAMGPRLLYCVALGLLGAGPMGAMVTQNPRYQVTRRGTPVNLSCFQNMNHDAMYWYQQKPSQAPKLLFYYYDEVLNSEKDTSENFKGSRPNPSFCSLGIRSPDLGDSAVYLCASSRDTEANTEVFFGGGTRLTVVEDLQQVRPPKVAVFEPSEAEISRTQKATLVCLATGFYPDHVELSWWVNGKQVQSGVSTDLQPYREDPSRNDSSYCLSSRLRVTAAFWHNPRNHFRCQVQFYGLTEDDEWEYNWTKPITQNISAEAWGKAGEQRGLASYQQGVLSATLLYEILLGKAALYAVLVSALVLMATVRRR", "length": 334, "header": "tr|A0A287AF37-1|A0A287AF37_PIG Computationally mapped isoform of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F6Q8S8-1" }, "locus": { "chromosome": "18", "start_pos": 7553716, "end_pos": 7421541, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000042053.3", "url": "https://www.ensembl.org/id/ENSSSCT00000042053.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042605.3", "url": "https://www.ensembl.org/id/ENSSSCP00000042605.3" } ] } }, { "isoform_ac": "A0A287AVZ7-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8S8/entry#A0A287AVZ7-1", "sequence": { "sequence": "MRDRAPLNPEVRVWNRQMPRSCSVPAMGPRLLYCVALGLLGAGPMGAMVTQNPRYQVTRRGTPVNLSCFQNMNHDAMYWYQQKPSQAPKLLFYYYDEVLNSEKDTSENFKGSRPNPSFCSLGIRSPDLGDSAVYLCASSRDTEAVSQNTQHFGPGTWLTVLEDLQQVRPPKVAVFEPSEAEISRTQKATLVCLATGFYPDHVELSWWVNGKQVQSGVSTDLQPYREDPSRNDSSYCLSSRLRVTAAFWHNPRNHFRCQVQFYGLTEDDEWEYNWTKPITQNISAEAWGKAGEQRGLASYQQGVLSATLLYEILLGKAALYAVLVSALVLMATVRRR", "length": 336, "header": "tr|A0A287AVZ7-1|A0A287AVZ7_PIG Computationally mapped isoform of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=F6Q8S8-1" }, "locus": { "chromosome": "18", "start_pos": 7553716, "end_pos": 7421541, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000054026.3", "url": "https://www.ensembl.org/id/ENSSSCT00000054026.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000048310.2", "url": "https://www.ensembl.org/id/ENSSSCP00000048310.2" } ] } }, { "isoform_ac": "F6Q8R7-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8S8/entry#F6Q8R7-1", "sequence": { "sequence": "MRFFSGAENIPRLFSCVALCLLWTGHAEAWITQSPRYEITVTGETVALQCYQTYNHDCVYWYQQDQGHGLRLIFYTCDVGILNKEEVPNGYNVSRPSMEDFSLILESVVPSRTSVYLCASTVSQNTQHFGPGTWLTVLEDLQQVRPPKVAVFEPSEAEISRTQKATLVCLATGFYPDHVELSWWVNGKQVQSGVSTDLQPYREDPSRNDSSYCLSSRLRVTAAFWHNPRNHFRCQVQFYGLTEDDEWEYNWTKPITQNISAEAWGKAGEQRGLASYQQGVLSATLLYEILLGKAALYAVLVSALVLMATCF", "length": 311, "header": "tr|F6Q8R7-1|F6Q8S8_PIG Computationally mapped isoform of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=F6Q8S8-1" }, "locus": { "chromosome": "18", "start_pos": 7580532, "end_pos": 7421129, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017940.4", "url": "https://www.ensembl.org/id/ENSSSCT00000017940.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017459.4", "url": "https://www.ensembl.org/id/ENSSSCP00000017459.4" } ] } }, { "isoform_ac": "F6Q8S8-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8S8/entry#F6Q8S8-1", "sequence": { "sequence": "MRDRAPLNPEVRVWNRQMPRSCSVPAMGPRLLYCVALGLLGAGPMGAMVTQNPRYQVTRRGTPVNLSCFQNMNHDAMYWYQQKPSQAPKLLFYYYDEVLNSEKDTSENFKGSRPNPSFCSLGIRSPDLGDSAVYLCASSRGLRAVSTDPLYFGEGTRLTVLEDLQQVRPPKVAVFEPSEAEISRTQKATLVCLATGFYPDHVELSWWVNGKQVQSGVSTDLQPYREDPSRNDSSYCLSSRLRVTAAFWHNPRNHFRCQVQFYGLTEDDEWEYNWTKPITQNISAEAWGKADCGFSSASYQQGVLSATLLYEILLGKAALYAVLVSALVLMATVKRKGA", "length": 338, "header": "tr|F6Q8S8-1|F6Q8S8_PIG Isoform 1 of Ig-like domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=F6Q8S8-1" }, "locus": { "chromosome": "18", "start_pos": 7553716, "end_pos": 7421216, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017939.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017939.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017458.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017458.5" } ] } }, { "isoform_ac": "I3L9U4-1", "url": "https://www.uniprot.org/uniprotkb/F6Q8S8/entry#I3L9U4-1", "sequence": { "sequence": 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"length": 1074, "header": "tr|A0A8D0NSL1-1|A0A8D0NSL1_PIG Computationally mapped isoform of M-phase phosphoprotein 9 OS=Sus scrofa OX=9823 GN=MPHOSPH9 PE=4 SV=1 CANONICAL=I3L5E5-1" }, "locus": { "chromosome": "14", "start_pos": 29723656, "end_pos": 29664274, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000055081.3", "url": "https://www.ensembl.org/id/ENSSSCT00000055081.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057024.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057024.2" } ] } }, { "isoform_ac": "I3L5E5-1", "url": "https://www.uniprot.org/uniprotkb/I3L5E5/entry#I3L5E5-1", "sequence": { "sequence": "MEDFDLGKPLQKASSSVESKIKNSSHSLGLNLNTTNRSSPLSTNGVSSFSGKTRPSVIQGTVEVLTSLMQELQNSGKTDSELWKNCETRWLQLFNLVEKQCQEQIVAQQEQFHNQIQRIQEEIKNLVKLQTNNASWASCDRSSLSKQISSESQMGFFSENSERNESVISFPKSKEPEMQQETSTSQQDCNVDSSSVSSGYGTFCVSELNTYKSKAAQECMEHAEVSEGQFGAPVVQTESLADGVKDQSFYIHTNEEFCASLKEYIPIFPGEFEHNFLGENKISEVYSGKTNSKSITSWAQKLKQNHPNRAHKEEGCSKSMQGNEQTKKSPIEKFDFTAATQPRAFYLNKPDENPNSWMSDSGTGLTYWKLEEKDMYQSLPETLEKMFAPAPSTDTSSSQSNTSNEMKLPSLKDIYHKKQRENKQLPERNLTYASNPNHPPEVLTLDPTLHMKPNQQISGIQPHGFLNTLDDRISFSPDSVLEPSMSSHSDIDSFSQASHIASQLSGFSKYPSNTKLSPVDSWKNHAFQNESRTSSTFPSVYTIGSNDISVNTIDEENTALVTCTSVSQSQLPGTANSVPECISLTSLEDPVILSKIRQSLKEKHARHIADLRAYYESEINILKQKLEEKEISAVEDWKKTNQILIDRCGQLDSALNEATSRVRALENKNNLLEREVSDFRERFNAASSASKILQERIEEMRTSNKEKDNTIIRLKSRLQDLEEAFENAYKLSDDKEARLKQENKMFQDLLGEYESLGKEHERVKDTLNTTENKLLDAHTQISDLKRTISKLEAQVKQVEHENMLSRLHNSKTPMRPLRANTLATADVSRRKWLIPGAEYSIFTGQPLDTQDGQVDNQLEETCTPGYHSPLEKDPSLGSSSLLIKKQRETSDAPIMKALKELDEEKIFKNWGTQTEKEDASNKLVTSRQADTSVNAGQSPEKGAQQRQKRFHSASQRSSSLPPSNRKSCAPTKREIMLTPVTVAYSPKRSPKENLSPGFSHLLSKNESSPIRFDILLDDLDTVPVSTLQRTNPRKQLQFLPLDDLEEKKYSEKATDIHVDHSSSPEPLPNGVKKVSVRPAWEKSKPLSHEPGQSTSATSQGNDFEYTAKIRTLAETERFFDELTKEKDQIEAALSRMPSTGGRTTLQTRLNQEALEDRLEKINRELGSVRMTLKKFHVLRTSANL", "length": 1184, "header": "tr|I3L5E5-1|I3L5E5_PIG Isoform 1 of M-phase phosphoprotein 9 OS=Sus scrofa OX=9823 GN=MPHOSPH9 PE=4 SV=4 CANONICAL=I3L5E5-1" }, "locus": { "chromosome": "14", "start_pos": 29723656, "end_pos": 29662091, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025142.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025142.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019244.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019244.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L5E5", "url": "https://www.uniprot.org/uniprotkb/I3L5E5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522574", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522574", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of cilium assembly", "id": "GO:1902018", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902018", "evidence": [ { "database": "UniProtKB", "id": "I3L5E5", "url": "https://www.uniprot.org/uniprotkb/I3L5E5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3L5E5", "url": "https://www.uniprot.org/uniprotkb/I3L5E5" } ], "pmid": "" }, { "name": "centrosome", "id": "GO:0005813", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005813", "evidence": [ { "database": "UniProtKB", "id": "I3L5E5", "url": "https://www.uniprot.org/uniprotkb/I3L5E5" } ], "pmid": "" }, { "name": "centriole", "id": "GO:0005814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005814", "evidence": [ { "database": "UniProtKB", "id": "I3L5E5", "url": "https://www.uniprot.org/uniprotkb/I3L5E5" } ], "pmid": "" }, { "name": "ciliary basal body", "id": "GO:0036064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0036064", "evidence": [ { "database": "UniProtKB", "id": "I3L5E5", "url": "https://www.uniprot.org/uniprotkb/I3L5E5" } ], "pmid": "" } ] } ] }, "pro_annotation": 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"start_pos": 529, "end_pos": 531 }, { "start_pos": 768, "end_pos": 770 }, { "start_pos": 993, "end_pos": 995 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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"OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L5H4", "url": "https://www.orthodb.org/?gene=I3L5H4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46468", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46468", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46468:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46468:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02902", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02902", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5689603", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689603", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8951664", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013847823", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013847823", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L5H4", "url": "https://www.uniprot.org/uniprotkb/I3L5H4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5H4-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHICFISPEVTQFIKCTGNPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEDFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQSLFRQQPESLLQLLTPTYITKKRSEWKDLIARLAKN", "length": 212, "header": "tr|I3L5H4-1|I3L5H4_PIG Isoform 1 of Sentrin-specific protease 8 OS=Sus scrofa OX=9823 GN=SENP8 PE=3 SV=2 CANONICAL=I3L5H4-1" }, "isoforms": [ { "isoform_ac": "I3L5H4-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H4/entry#I3L5H4-1", "sequence": { "sequence": "MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHICFISPEVTQFIKCTGNPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEDFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQSLFRQQPESLLQLLTPTYITKKRSEWKDLIARLAKN", "length": 212, "header": "tr|I3L5H4-1|I3L5H4_PIG Isoform 1 of Sentrin-specific protease 8 OS=Sus scrofa OX=9823 GN=SENP8 PE=3 SV=2 CANONICAL=I3L5H4-1" }, "locus": { "chromosome": "1", "start_pos": 169614206, "end_pos": 169613571, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022859.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022859.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019273.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019273.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L5H4", "url": "https://www.uniprot.org/uniprotkb/I3L5H4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625525", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625525", "resource": "KEGG Pathway" }, { "id": "R-SSC-5689603", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5689603", "resource": "Reactome", "description": "UCH proteinases" }, { "id": "R-SSC-8951664", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8951664", "resource": "Reactome", "description": "Neddylation" } ], "orthologs": [ { "uniprot_canonical_ac": "E1JH43-1", "protein_name": "Deneddylase 1, isoform C", "gene_name": "Den1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MLPHDRKILRQHTRQNQNTNRRRPRFTNNSFHTKMGSNSKADPISLTFHDSCLRMSDVQLLHGPHWLNDQILSFYYEYLAHMKYKTNADLHFIAPEITQCMKYMGDQELKQLLDQSNTTGKPFIFFALNDNETTDAGGSHWSLLVFSRPEKTFYHFDSYGNNNTGNSLELMNKIKDLLGVRMAKFRPMRCLQQANGYDCGIHVICMTDHIADYLNRYEVIDGLPSLHIDTVKAKRTELLKLILSLGGKG", "length": 249 }, "evidence": [ { "id": "I3L5H4", "url": "https://omabrowser.org/oma/group/I3L5H4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q54XR2-1", "protein_name": "Probable sentrin-specific protease 8", "gene_name": "senp8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDPLIVSYNDSAIYQSDINILKSNQWLNDSIISFYLEWLKDGGEDNKNKIPNQVLLLSPSVVFCCSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGGTHWSLLIFIKSLNKFIYYDSINSFNSSDAIFIISKFKFLLSSPPPKTNLKEFLINQKTPQQQNGYDCGLYVLSIIEELLKLIIKENENNKGEENKISYKDLLLSEFTNELLFKEITPNYIKDKRVEILNTILKLKK", "length": 243 }, "evidence": [ { "id": "I3L5H4", "url": "https://omabrowser.org/oma/group/I3L5H4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q5FVJ8-1", "protein_name": "Sentrin-specific protease 8", "gene_name": "Senp8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDPVVLSYMDSLLRQSDVSLLDPPNWLNDHIIGFAFEYFASSQFHDCSDHVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFLGSKGDKLVFVEEKAPAQQNSYDCGMYVICNTEALCQNLFRRQPESPLQLLTPTYITKKRGEWKDLIARLAKKNRSSY", "length": 217 }, "evidence": [ { "id": "I3L5H4", "url": "https://omabrowser.org/oma/group/I3L5H4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q96LD8-1", "protein_name": "Sentrin-specific protease 8", "gene_name": "SENP8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVSFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAFVEEKAPAQQNSYDCGMYVICNTEALCQNFFRQQTESLLQLLTPAYITKKRGEWKDLITTLAKK", "length": 212 }, "evidence": [ { "id": "I3L5H4", "url": "https://omabrowser.org/oma/group/I3L5H4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D2Z4-1", "protein_name": "Sentrin-specific protease 8", "gene_name": "Senp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPVVLSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFLGSKGDKLVFVEEKAPAQENSYDCGMYVICNTEALCQSLFRRQPESPLQLLTPTYITKKRGEWKDLIARLAKKNEVATEECS", "length": 221 }, "evidence": [ { "id": "I3L5H4", "url": "https://omabrowser.org/oma/group/I3L5H4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LSS7-1", "protein_name": "NEDD8-specific protease 1", "gene_name": "NEDP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGNTSDDDKILSYEDVVLRRSDLDILNGPIFLNDRVIEFYLSFLSTVHSSTTISLIPPSIAFWISNCPDTEYLKDFMKPLNLRDKDLLILPVNDNSNVEVAEGGLHWSLLVYYKEANTFVHHDSYMGVNRWSAKQLFKAVSPFVSNGDASYKECTDTPQQKNGYDCGVFLLATARVICEWFSSGGMKNRDELWFANVKETVPDLVNHLREEILALIKKLMSESVSK", "length": 226 }, "evidence": [ { "id": "I3L5H4", "url": "https://omabrowser.org/oma/group/I3L5H4/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "R4GKQ2-1", "protein_name": "SUMO/sentrin peptidase family member, NEDD8 specific", "gene_name": "SENP8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDPVVLSYMDSLLRQSDVALLDPPNWLNDHIIGFAFEYFASDQFQEFSDQICFISPEVAQFIKCALSQEEIAIFLQPLDLLHKKLVFLPINDNSNQAAGGTHWSLLVYFRDKKCFAHYDSHSKCNSVHAKQVAGKLEAFLGKRGGKATFVEEKAPAQQNSYDCGMYVICNAEALCQGYFSGQQEPLLQLLTPSYITQKRSEWKALITKLTQKCSGCSQVTALSA", "length": 224 }, "evidence": [ { "id": "I3L5H4", "url": "https://omabrowser.org/oma/group/I3L5H4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "deNEDDylase activity", "id": "GO:0019784", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019784", "evidence": [ { "database": "UniProtKB", "id": "I3L5H4", "url": "https://www.uniprot.org/uniprotkb/I3L5H4" } ], "pmid": "" }, { "name": "cysteine-type peptidase activity", "id": "GO:0008234", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008234", "evidence": [ { "database": "UniProtKB", "id": "I3L5H4", "url": "https://www.uniprot.org/uniprotkb/I3L5H4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3L5H4", "url": "https://www.uniprot.org/uniprotkb/I3L5H4" } ], "pmid": "" }, { "name": "protein deneddylation", "id": "GO:0000338", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000338", "evidence": [ { "database": "UniProtKB", "id": "I3L5H4", "url": "https://www.uniprot.org/uniprotkb/I3L5H4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L5H4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5H4" }, { "id": "PS50600", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50600" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ubiquitin-like protease family profile", "eco_id": "ECO_0000259", "start_pos": 11, "end_pos": 174, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L5H8-1", "uniprot_ac": "I3L5H8", "uniprot_id": "I3L5H8_PIG", "mass": { "chemical_mass": 115843.0, "monoisotopic_mass": 115843.0 }, "refseq": { "ac": "XP_020956325", "name": "ubiquitin carboxyl-terminal hydrolase 38", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956325" }, "gene_names": [ { "name": "USP38", "type": "recommended", "evidence": [ { "id": "I3L5H8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ] }, { "name": "USP38", "type": "synonym", "evidence": [ { "id": "XP_020956325", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956325" } ] } ], "protein_names": [ { "name": "Ubiquitin specific peptidase 38", "type": "synonym", "evidence": [ { "id": "I3L5H8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5H8/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin carboxyl-terminal hydrolase 38", "type": "synonym", "evidence": [ { "id": "XP_020956325", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956325" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "USP38", "url": "https://www.uniprot.org/uniprotkb/I3L5H8", "locus": { "chromosome": "8", "start_pos": 84567618, "end_pos": 84601224, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000009049", "url": "https://www.ensembl.org/id/ENSSSCG00000009049" } ] } } ], "crossref": [ { "id": "ENSSSCG00000009049", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000009049", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02664", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02664", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624340", "url": "https://www.ncbi.nlm.nih.gov/gene/100624340", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001394", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001394", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018200", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018200", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028889", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028889", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR033840", "url": "https://www.ebi.ac.uk/interpro/entry/IPR033840", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038765", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038765", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR049407", "url": "https://www.ebi.ac.uk/interpro/entry/IPR049407", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050164", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050164", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624340", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624340", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AFVCDSV", "url": "https://omabrowser.org/oma/group/AFVCDSV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L5H8", "url": "https://www.orthodb.org/?gene=I3L5H8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24006", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24006", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24006:SF710", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24006:SF710", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00443", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00443", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF21246", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21246", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020956325", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956325", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1RRG6", "url": "https://www.uniprot.org/uniprotkb/F1RRG6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RRG6-1", "url": "https://www.uniprot.org/uniprotkb/F1RRG6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5H8-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDKILEGLVSSSHPLPLKRVIVRKVVESAENWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVHRMVCERPEPHLCARLSDLLSDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSNLLQNIWKGEPSTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFRSDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRVSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQPSHKPSESPGCSETSLQEVANKAAGLTETSCTSDGEKTLIEKMFGGKLQTHICCLNCRSTSQKVEAFTDLSLAFCPSSSMENLSFQDPASSGSSHDGGLMQGRVPGPSKEPGVYNPATAAFACDSAVSEGMVGSPDEFRCAEDISVPNDSRKMLVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTTSFSSLSESWSLDVDFTDISENLAKKLKPSGTEEACCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTECSYQLCHQPETLALASSQGHLPGRDSPSAVIEQDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQNSTNSLGGSNSTTGLWVNGDPPLQKELMEAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF", "length": 1041, "header": "tr|I3L5H8-1|I3L5H8_PIG Isoform 1 of Ubiquitin specific peptidase 38 OS=Sus scrofa OX=9823 GN=USP38 PE=4 SV=2 CANONICAL=I3L5H8-1" }, "isoforms": [ { "isoform_ac": "F1RRG6-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H8/entry#F1RRG6-1", "sequence": { "sequence": "MDKILEGLVSSSHPLPLKRVIVRKVVESAENWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVHRMVCERPEPHLCARLSDLLSDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSNLLQNIWKGEPSTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELIVPHVVNLVHSFRSDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRVSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQPSHKPSESPGCSETSLQEVANKAAGLTETSCTSDGEKTLIEKMFGGKLQTHICCLNCRSTSQKVEAFTDLSLAFCPSSSMENLSFQDPASSGSSHDGGLMQGRVPGPSKEPGVYNPATAAFACDSAVSEGMVGSPDEFRCAEDISVPNDSRKMLVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTTSFSSLSESWSLDVDFTDISENLAKKLKPSGTEEACCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTECSYQLCHQPETLALASSQGHLPGRDSPSAVIEQDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQNSTNSLGGSNSTTGLWVNGDPPLQKELMEAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF", "length": 1007, "header": "tr|F1RRG6-1|F1RRG6_PIG Computationally mapped isoform of Ubiquitin specific peptidase 38 OS=Sus scrofa OX=9823 GN=USP38 PE=4 SV=4 CANONICAL=I3L5H8-1" }, "locus": { "chromosome": "8", "start_pos": 84600466, "end_pos": 84568554, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009910.5", "url": "https://www.ensembl.org/id/ENSSSCT00000009910.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009655.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009655.4" } ] } }, { "isoform_ac": "I3L5H8-1", "url": "https://www.uniprot.org/uniprotkb/I3L5H8/entry#I3L5H8-1", "sequence": { "sequence": "MDKILEGLVSSSHPLPLKRVIVRKVVESAENWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVHRMVCERPEPHLCARLSDLLSDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSNLLQNIWKGEPSTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFRSDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRVSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQPSHKPSESPGCSETSLQEVANKAAGLTETSCTSDGEKTLIEKMFGGKLQTHICCLNCRSTSQKVEAFTDLSLAFCPSSSMENLSFQDPASSGSSHDGGLMQGRVPGPSKEPGVYNPATAAFACDSAVSEGMVGSPDEFRCAEDISVPNDSRKMLVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTTSFSSLSESWSLDVDFTDISENLAKKLKPSGTEEACCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTECSYQLCHQPETLALASSQGHLPGRDSPSAVIEQDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQNSTNSLGGSNSTTGLWVNGDPPLQKELMEAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF", "length": 1041, "header": "tr|I3L5H8-1|I3L5H8_PIG Isoform 1 of Ubiquitin specific peptidase 38 OS=Sus scrofa OX=9823 GN=USP38 PE=4 SV=2 CANONICAL=I3L5H8-1" }, "locus": { "chromosome": "8", "start_pos": 84600466, "end_pos": 84568554, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027160.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027160.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019277.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019277.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1025, "start_aa": "Thr", "end_pos": 1025, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1025", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624340", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624340", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5P874-1", "protein_name": "Ubiquitin specific peptidase 38", "gene_name": "USP38", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MDKILEGLVSSSHPLPLKRVIVRRVVELAETPLSQAQCRAMFALGTRLVLQGPDAFQRQVGRQVLEAYGRYHRAEFEAFFNRGLVLGLLQRGYGELSCRDPAILDYIQAGLRLIMSCPSVLELFELLQVEALRLVCERPAPPLCARLCQLLGDFPQCLPRGRKLSLAFCQQLVRSIAHFQSQGSREAELRLYVSQVTQVSGLLRSVWKAEPDTLLPSLQELFAVIAAADTPFEPSVALASLVQHIPLQMITVLIMSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLAAVQKFTILIDVTLMKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLVVPHVVSLVHSFKSDGLPSSTAFLMQLAELIHCMMYHYSGFPELYEPILEVFKDMPKPSEEKMRLILSQSAWTSQSNSLPSCLSRLSGKSETGKTGLINLGNTCYMNSIIQALFMATDFRRHVLSLNLNGCNSLMRKLQHLFAFLAHTQREAYAPRIFLEASRPPWFTPQSQQDCSEYLRFLLNRLHEEERTLKALSSAKAAESRKNEESQAQETVHKAQVFAEALCKGSEERTLIERMFGGKLKTTICCLNCKSTSQKEEAFTDLSLAFCPPTSLESAGVKCLEHSEIKDGSVVQSSISATPAGETPPSSLEINGGCNAITNEGILKDSAEPNSEPKSEFNKDQDSRDVSSALVGKNTPSVTDLLNYFLAPEILSGDNKYYCEKCASLQNAEKTMQIIEEPEYLILTLLRFSYDPKCHIRRKILDSVSLPLLLELPVRRATSPLAVVSGSWSVDVEISDIGENLAKKLKPSGADEVSCPQLVPYVLSSVVVHSGVSSESGHYYSYARNVTGSGSSGQCHQSKAFSLISTQNKLLAEEGPCTVIENELDTEMPKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLIYKKQNSTCGYNTNSANGLWVNGDPPLQKDLMDAITKDNKLYLQEQELSARTQALQAASASCSFRPNGFDDNDPPGSCGPAGGGGGGGFSTVGRLVF", "length": 1035 }, "evidence": [ { "id": "I3L5H8", "url": "https://omabrowser.org/oma/group/I3L5H8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3Z8K5-1", "protein_name": "ubiquitinyl hydrolase 1", "gene_name": "Usp38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKILEGLVSSSHPLPLKRMIVRKVVESAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPLLCARLSDLLTDFVQCVPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSNLLQNIWKAEPSTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTRALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSGFPDLYEPILEAVKDFPKPTEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINLGNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRIQSSHKPSEGLGCTETCLQEVTNKVAVPSESPSTGGSEKTLIEKMFGGKLRTHICCLNCRSTSHKVEAFTDLSLAFCPSPSVEDSSFQDPASLPSAQDDGLMQTSVTDAEEEPVVCNPAAAAFVCDSVVNERRLGSPPVEFPCAKNSSVPGESAKILVSKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTSLSSLSEGWSADADFTDVNENLAKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTESSYQMRPQSESLSLTPSQSSLLGGESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLFYKKQSRTNGVRSDNPASGVWVNGEPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNAVGRLVF", "length": 1041 }, "evidence": [ { "id": "I3L5H8", "url": "https://omabrowser.org/oma/group/I3L5H8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q55BI4-1", "protein_name": "Peptidase C19 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNYPHNTDNNDIILLLIDCISYKDISRQSIDRIKQFVENENDFKKLVNNLNIGLDYISQQQQPTATTIITNNGDFKSQLYSIMSDIFQTVYIKNKDIIEFNNFISICFTPSLLTSLLTPIISHNITSFLQIFKIILNCKIKHLNVFTVENINDIQYFYRSLKNIATRYPKIINRNSNILNEELLTKPISMLLVKIIIDDLSTLPITMEPKQYDEIVYQYTKTIQLFWNSNQLSSIQVSMEHMFKKLMMSSSSSSSSSSNSSSSSSNNEIITPSISNVLNQSPIELIPLFINIIDNGSVSDIDLLETITKLTQWPLTPTNSKWILETFNSLIRSKKTTLLASIVVESALSVIKQMFVLPLLSSSFEILQKMLLGYQHSPDTFHSIIDLFPIVIELLLMFHNKINAIQHQPNGVDDGDGDDAIKRIEFINQNTQQTVYKLINECNKNRKELLLISIKNTSQPSKYRNTILITLIKFCQLSYTLMFHHTGYPELYAPLLESLNKCNHLLPSIPSEFQMKRLLQDNEWQSLDSMVFENIKLNRVLTDRSGLINLGNTCYMNSFLQSLYMTIPFRNYLLFKIDQNLIKFINNNNNNNNNNTNNNDNNNDEEIFKIYSKEILKRPQLLKQIQLLFGNLRLSIKESISPNLFLQSLPIEFQTGQQHDSFEFGKSLLDHLDLIFKQQIKNEQQQQQQQQQQQQLNLKNSNNASNSTNIVTEISNQFGGKLSQITTCRKCSSESIKVEEFLELSLPFHDHRKQQYQLEEMINGYLSNEELIGDNRYHCSKCNSLQDADKIIEINETPNHLIIGLNRFHFSRETKSIEKLLNHVDYPLNLNLPFIQNHQKDRNNDEIKNENENEIKNENENENEKEDFKKIKINENDDDDDDDDGDENSKEKKKKSIIKLSNYSLYSVIIHSGRSPTHGHYYNYSCTSSNNSNGKPVDWCLFNDSMVKITDVQTFKNINKQFYTDVPYILFYVKNPSLPSSPIDNTIDTTNNDDVSPWIKQSIIKENQNLLSKFNNTKNKNSNILEQFHTSGYFKKK", "length": 1037 }, "evidence": [ { "id": "I3L5H8", "url": "https://omabrowser.org/oma/group/I3L5H8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BW70-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 38", "gene_name": "Usp38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDKILEGLVSSSHPLPLKRMIVRKVVEFAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSVDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPVLCARLSDLLTDFVQCVPKGKLSVTFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSTLLQNIWKAEPSTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSGFPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINLGNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILRVQSSHKPSEGLDCAETCLQEVTSKVAVPTESPGTGDSEKTLIEKMFGGKLRTHICCLNCGSTSHKVEAFTDLSLAFCPSPSVEDLSFQDTASLPSAQDDGLMQTSVADPEEEPVVYNPATAAFVCDSVVNQRVLGSPPVEFHCAESSSVPEESAKILISKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSQSWSVDVDFTDINENLPKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTESSYQMCPQSESLALAPSQSCLLGVESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQSRANGIDSDNPASGVWANGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF", "length": 1042 }, "evidence": [ { "id": "I3L5H8", "url": "https://omabrowser.org/oma/group/I3L5H8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NB14-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 38", "gene_name": "USP38", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDKILEGLVSSSHPLPLKRVIVRKVVESAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLHQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPQLCARLSDLLTDFVQCIPKGKLSITFCQQLVRTIGHFQCVSTQERELREYVSQVTKVSNLLQNIWKAEPATLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLIVPHVVNLVHSFKNDGLPSSTAFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILNQSAWTSQSNSLASCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQASHKPSEILECSETSLQEVASKAAVLTETPRTSDGEKTLIEKMFGGKLRTHIRCLNCRSTSQKVEAFTDLSLAFCPSSSLENMSVQDPASSPSIQDGGLMQASVPGPSEEPVVYNPTTAAFICDSLVNEKTIGSPPNEFYCSENTSVPNESNKILVNKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRITSFSSLSESWSVDVDFTDLSENLAKKLKPSGTDEASCTKLVPYLLSSVVVHSGISSESGHYYSYARNITSTDSSYQMYHQSEALALASSQSHLLGRDSPSAVFEQDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQHSTNGLSGNNPTSGLWINGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF", "length": 1042 }, "evidence": [ { "id": "I3L5H8", "url": "https://omabrowser.org/oma/group/I3L5H8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 6, "go_terms": [ { "name": "regulation of protein stability", "id": "GO:0031647", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031647", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" }, { "name": "ubiquitin-dependent protein catabolic process", "id": "GO:0006511", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006511", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" }, { "name": "negative regulation of proteasomal ubiquitin-dependent protein catabolic process", "id": "GO:0032435", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032435", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" }, { "name": "negative regulation of innate immune response", "id": "GO:0045824", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045824", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" }, { "name": "protein K33-linked deubiquitination", "id": "GO:1990168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990168", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" }, { "name": "protein deubiquitination", "id": "GO:0016579", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016579", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "cysteine-type deubiquitinase activity", "id": "GO:0004843", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004843", "evidence": [ { "database": "UniProtKB", "id": "I3L5H8", "url": "https://www.uniprot.org/uniprotkb/I3L5H8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 418, "end_pos": 420, "annotation": "n_glycosylation_sequon" }, { "start_pos": 628, "end_pos": 630, "annotation": "n_glycosylation_sequon" }, { "start_pos": 694, "end_pos": 696, "annotation": 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"MSLHAWEWEDEDQASMGPMSSISSFYGSESQCEAEEHLVVRAWAQESDSNHPCSSESSDRPASTFTSDMPHVVPCKFIISLAFPVTAGHKGKYSSFIEKYRRHTKMDKAIAKVRHYCHIEYFLLPGDVEPQKVDMVVFPASAKVFLDSGIKTVRPWQEGDKVWVSWTQTFNINMTKELLKTINFHKITLRLWDTKDKVSKKVRYYRLKPSVFSEDTGSFEEVKHLVLSQRRLSEQSIHIKEELHQEHTPGKPEKAIKSLKTLQGEWSWPWWGASKPVMSSGGATMSEMRQLIERPSHSSVTNLLEKQKFQIKQKESNGQRKSRRRRKKSRLEEETDSSLAGLGRQSPISIQLAMMPLLAGWQTVVSHGHRRSTNILDCFLTLKTEVPLMTEEQKQELNPLTIKIKCVSCLPSQPVSIPELERLCMPVYCRYQFHETPVHRTEGQPHGNRVYFQDVNVIFLGAMHPSDLREYLEGPPMVVEVHDRDRKLEGYSRKPTLFGEDPLDSYLNLQALISPKETENNPFEYREKTWDPYGVAQVSFADLLLGHKFLNLAVPVHSCKPKATAVGQHCRSRKVVGSQAPRGGLQCGPMPTGNYLEASTLLKLRVDVAVPLRARPEAPEPPAAQFGRIIFVFDSRKITLLLSLLQDITMINARALDLDVYPLEDMQQILSAFKMRVKIQERQDLDVLTGFHLLDGRVHLLILEGLAEQGLKQLWEGHQSRVPQAEQGGYKVLYNSELRFRSRLYADLETVLYHVRLFQPLAQLVKHTVLYVRNTVPQPVFQALNRIYCICQYSARLRDVVTGDLLPSSAMIKELSQEFGIPISQEDLTEGKLLAVSPPPAPNLDFWSRKSTLTSEIQVHQEKYLQWRNTMILKSKEQKRSLIQKNITGAYQVIKKPPKSVVKVIRITAPAKDAVYNYSIQTLNSAELAKKELYREMGKEPRKRFTYSQNYLSAMVEPQDTEEEKRKAMRKSRQAWLTPNGFQVVGLHSMEWTPHLGLLPPIDATTEEWREKALFANVLEPVLHRERWCWDRRHQDFDLYTQPPPFLELPPPPNSVKQEDMDLVCFLPGSPCLPSAQAQVPCYLVVDPRLRITVTSMGLP", "length": 1100, "header": "tr|I3L601-1|I3L601_PIG Isoform 1 of Cilia and flagella associated protein 92 (putative) OS=Sus scrofa OX=9823 GN=CFAP92 PE=4 SV=4 CANONICAL=I3L601-1" }, "isoforms": [ { "isoform_ac": "I3L601-1", "url": "https://www.uniprot.org/uniprotkb/I3L601/entry#I3L601-1", "sequence": { "sequence": "MSLHAWEWEDEDQASMGPMSSISSFYGSESQCEAEEHLVVRAWAQESDSNHPCSSESSDRPASTFTSDMPHVVPCKFIISLAFPVTAGHKGKYSSFIEKYRRHTKMDKAIAKVRHYCHIEYFLLPGDVEPQKVDMVVFPASAKVFLDSGIKTVRPWQEGDKVWVSWTQTFNINMTKELLKTINFHKITLRLWDTKDKVSKKVRYYRLKPSVFSEDTGSFEEVKHLVLSQRRLSEQSIHIKEELHQEHTPGKPEKAIKSLKTLQGEWSWPWWGASKPVMSSGGATMSEMRQLIERPSHSSVTNLLEKQKFQIKQKESNGQRKSRRRRKKSRLEEETDSSLAGLGRQSPISIQLAMMPLLAGWQTVVSHGHRRSTNILDCFLTLKTEVPLMTEEQKQELNPLTIKIKCVSCLPSQPVSIPELERLCMPVYCRYQFHETPVHRTEGQPHGNRVYFQDVNVIFLGAMHPSDLREYLEGPPMVVEVHDRDRKLEGYSRKPTLFGEDPLDSYLNLQALISPKETENNPFEYREKTWDPYGVAQVSFADLLLGHKFLNLAVPVHSCKPKATAVGQHCRSRKVVGSQAPRGGLQCGPMPTGNYLEASTLLKLRVDVAVPLRARPEAPEPPAAQFGRIIFVFDSRKITLLLSLLQDITMINARALDLDVYPLEDMQQILSAFKMRVKIQERQDLDVLTGFHLLDGRVHLLILEGLAEQGLKQLWEGHQSRVPQAEQGGYKVLYNSELRFRSRLYADLETVLYHVRLFQPLAQLVKHTVLYVRNTVPQPVFQALNRIYCICQYSARLRDVVTGDLLPSSAMIKELSQEFGIPISQEDLTEGKLLAVSPPPAPNLDFWSRKSTLTSEIQVHQEKYLQWRNTMILKSKEQKRSLIQKNITGAYQVIKKPPKSVVKVIRITAPAKDAVYNYSIQTLNSAELAKKELYREMGKEPRKRFTYSQNYLSAMVEPQDTEEEKRKAMRKSRQAWLTPNGFQVVGLHSMEWTPHLGLLPPIDATTEEWREKALFANVLEPVLHRERWCWDRRHQDFDLYTQPPPFLELPPPPNSVKQEDMDLVCFLPGSPCLPSAQAQVPCYLVVDPRLRITVTSMGLP", "length": 1100, "header": "tr|I3L601-1|I3L601_PIG Isoform 1 of Cilia and flagella associated protein 92 (putative) OS=Sus scrofa OX=9823 GN=CFAP92 PE=4 SV=4 CANONICAL=I3L601-1" }, "locus": { "chromosome": "13", "start_pos": 71491976, "end_pos": 71423234, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028260.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028260.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019452.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019452.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L601", "url": "https://www.uniprot.org/uniprotkb/I3L601" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 173, "end_pos": 175, "annotation": "n_glycosylation_sequon" }, { "start_pos": 886, "end_pos": 888, "annotation": "n_glycosylation_sequon" }, { "start_pos": 917, "end_pos": 919, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L601-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1100, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L601-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L601" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L601", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L601" }, { "id": "PF15084", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15084" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DUF4550", "eco_id": "ECO_0000259", "start_pos": 116, "end_pos": 208, "start_aa": "Tyr", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 173, "end_pos": 175 }, { "start_pos": 886, "end_pos": 888 }, { "start_pos": 917, "end_pos": 919 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L631-1", "uniprot_ac": "I3L631", "uniprot_id": "I3L631_PIG", "mass": { "chemical_mass": 72770.0, "monoisotopic_mass": 72770.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "PNMA family member 6E", "type": "recommended", "evidence": [ { "id": "I3L631", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L631/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L631", "url": "https://www.uniprot.org/uniprotkb/I3L631" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3L631", "locus": {} } ], "crossref": [ { "id": "I3L631", "url": "https://alphafold.ebi.ac.uk/entry/I3L631", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030075", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030075", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR026523", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026523", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048270", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048270", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR048271", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048271", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23095", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23095", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23095:SF20", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23095:SF20", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14893", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14893", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20846", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20846", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L631", "url": "https://www.uniprot.org/uniprotkb/I3L631", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L631-1", "url": "https://www.uniprot.org/uniprotkb/I3L631-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSKMALAMLRDWCRWMGVNAQRSLLILGIPDDCGEQEFQEAVQAALRPLGRYRVLGKVFRKELGSRVALVEFAEYLNRSLIPRKIPGKGGPWTVVFLPQAPNSESQDRPSFSAQAQRQAVAGRSAGEAGAAGETGTAGETGTTSETEAVGEAGGAGEAGAAGEAGAAGETEAVGEAGVAGEAGIADEAGATGLEGATDEVGAESGAGTADADKIVTAGDAGATGEVGVGGEAEVTDEEEATGEAGVTGLEGSPDEVGAETGAGAAGEAGTTSETEAVGEAGVAGEAGVAGEAGATGLEGATDEVGAETGAGGAGEAGALGEAEAAGEAGAAGEAGAEAVAGAAGEAEVAGEAGAADEAGLSDEEGAAGDTGVAGVAGSLSMAGAAGEAGAPGEGAGVGVAGAMAEAGAWTRQWRQALQPVLETMGYEELRAFSGLGEPGGGEESFESWLDHANDMLYLWRHVSERERRRRLVESLGGPALDLLCGLLAQDADMAAQDCLAALVQVFGDQDSPVTARLRFATCAQRPQETLFAYVMRLEGLLQAAVETEAIHPATADQARARQVLMRARPNDTLQTKLRRLRLERRPPGFVGLLRLIRESEAWEAEPAASEQGHGEEEAHAGIGTAAEGTLAFPAPLAFPAREDSGQAALSRKVAAPAPVGLGLAGSSDAPRGPTPPHMGGLSPGAPGGPGCEPDDLDQAGDQEAEEPPEEPGNEVGAADISTPEAFSGQ", "length": 730, "header": "tr|I3L631-1|I3L631_PIG Isoform 1 of PNMA family member 6E OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=I3L631-1" }, "isoforms": [ { "isoform_ac": "I3L631-1", "url": "https://www.uniprot.org/uniprotkb/I3L631/entry#I3L631-1", "sequence": { "sequence": "MSSKMALAMLRDWCRWMGVNAQRSLLILGIPDDCGEQEFQEAVQAALRPLGRYRVLGKVFRKELGSRVALVEFAEYLNRSLIPRKIPGKGGPWTVVFLPQAPNSESQDRPSFSAQAQRQAVAGRSAGEAGAAGETGTAGETGTTSETEAVGEAGGAGEAGAAGEAGAAGETEAVGEAGVAGEAGIADEAGATGLEGATDEVGAESGAGTADADKIVTAGDAGATGEVGVGGEAEVTDEEEATGEAGVTGLEGSPDEVGAETGAGAAGEAGTTSETEAVGEAGVAGEAGVAGEAGATGLEGATDEVGAETGAGGAGEAGALGEAEAAGEAGAAGEAGAEAVAGAAGEAEVAGEAGAADEAGLSDEEGAAGDTGVAGVAGSLSMAGAAGEAGAPGEGAGVGVAGAMAEAGAWTRQWRQALQPVLETMGYEELRAFSGLGEPGGGEESFESWLDHANDMLYLWRHVSERERRRRLVESLGGPALDLLCGLLAQDADMAAQDCLAALVQVFGDQDSPVTARLRFATCAQRPQETLFAYVMRLEGLLQAAVETEAIHPATADQARARQVLMRARPNDTLQTKLRRLRLERRPPGFVGLLRLIRESEAWEAEPAASEQGHGEEEAHAGIGTAAEGTLAFPAPLAFPAREDSGQAALSRKVAAPAPVGLGLAGSSDAPRGPTPPHMGGLSPGAPGGPGCEPDDLDQAGDQEAEEPPEEPGNEVGAADISTPEAFSGQ", "length": 730, "header": "tr|I3L631-1|I3L631_PIG Isoform 1 of PNMA family member 6E OS=Sus scrofa OX=9823 GN= PE=4 SV=4 CANONICAL=I3L631-1" }, "locus": { "chromosome": "X", "start_pos": 124205620, "end_pos": 124202837, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022521.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022521.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019482.4", "url": "https://www.ensembl.org/id/ENSSSCP00000019482.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 675, "start_aa": "Thr", "end_pos": 675, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr675", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L631", "url": "https://www.uniprot.org/uniprotkb/I3L631" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 571, "end_pos": 573, "annotation": "n_glycosylation_sequon" }, { "start_pos": 78, "end_pos": 80, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L631-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 730, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L631-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L631" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L631", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L631" }, { "id": "PF14893", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14893" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Paraneoplastic antigen Ma-like C-terminal", "eco_id": "ECO_0000259", "start_pos": 433, "end_pos": 594, "start_aa": "Phe", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L631", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L631" }, { "id": "PF20846", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20846" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Paraneoplastic antigen Ma-like N-terminal", "eco_id": "ECO_0000259", "start_pos": 5, "end_pos": 96, "start_aa": "Met", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 675 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 571, "end_pos": 573 }, { "start_pos": 78, "end_pos": 80 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L691-1", "uniprot_ac": "I3L691", "uniprot_id": "I3L691_PIG", "mass": { "chemical_mass": 60587.0, "monoisotopic_mass": 60587.0 }, "refseq": {}, "gene_names": [ { "name": "TEPSIN", "type": "recommended", "evidence": [ { "id": "I3L691", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L691" } ] } ], "protein_names": [ { "name": "AP-4 complex accessory subunit Tepsin", "type": "recommended", "evidence": [ { "id": "I3L691", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L691/entry#names_and_taxonomy" } ] }, { "name": "ENTH domain-containing protein 2", "type": "synonym", "evidence": [ { "id": "I3L691", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L691/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Associates with the adapter-like complex 4 (AP-4) and may therefore play a role in vesicular trafficking of proteins at the trans-Golgi network.", "evidence": [ { "database": "UniProtKB", "id": "I3L691", "url": "https://www.uniprot.org/uniprotkb/I3L691#function" }, { "database": "UniProtKB", "id": "ARBA00054808", "url": "https://www.uniprot.org/uniprotkb/ARBA00054808#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L691", "url": "https://www.uniprot.org/uniprotkb/I3L691" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TEPSIN", "url": "https://www.uniprot.org/uniprotkb/I3L691", "locus": { "chromosome": "12", "start_pos": 1529542, "end_pos": 1519760, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028593", "url": "https://www.ensembl.org/id/ENSSSCG00000028593" } ] } } ], "crossref": [ { "id": "I3L691", "url": "https://alphafold.ebi.ac.uk/entry/I3L691", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028593", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028593", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd03572", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03572", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR008942", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008942", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035802", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035802", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR039273", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039273", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR058028", "url": "https://www.ebi.ac.uk/interpro/entry/IPR058028", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "KASQRCP", "url": "https://omabrowser.org/oma/group/KASQRCP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR21514", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21514", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21514:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21514:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF25827", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25827", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L691", "url": "https://www.uniprot.org/uniprotkb/I3L691", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L691-1", "url": "https://www.uniprot.org/uniprotkb/I3L691-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAATPQLRDRLSFLHRLPLLLKGTSDDDTPCPGFLFEEIAKISHESLGSSQCLLEYLLSRLHSGSGRVKLKVLKILLHLCGHGSSASLLILRRNPAFIQEAAVFAGPPDPLHGNSLYQKVRAAAQDLGAALFSDALSPPPPSQPPRAPPPAGMGSQSRPQSALQGFGYSKDQRHTGSAGEAFLSTIQKAAEVVASAVRPGPESPGTQRPLPQGDAYQPAMTPSAGLGPPPGDPLPTAGPAARAVRHQPGQAGGGWDEPDSSPSSQNSSQESSDLGKASDSGSQSGSDSPSGASRAPSDLAERVEAVTLSDCQQELSLVQAVTRGLQTFLSREEVQHFVKECGVLNCEAVLELLLRHLGGTSERVQMRALGAIASLGCTDLLAQERVLLLARPRLQELSAGSPGPVTNKATKILRHFEASCRQWPPARRPLAEPGPAAARGGPSDLLTDALPLAGGQAFLQPLSSALFSSRGTAVPATALDGCSPPAPGDAREAEARLAASREQGSGSEWDPSGLDTPTGAPGLGPGPRLGHDSLFAGMELVACPRLVGAGAAEEEPLPAPWTASQRPAAQEPSGSEPSAFAFLNV", "length": 585, "header": "tr|I3L691-1|I3L691_PIG Isoform 1 of AP-4 complex accessory subunit Tepsin OS=Sus scrofa OX=9823 GN=TEPSIN PE=4 SV=2 CANONICAL=I3L691-1" }, "isoforms": [ { "isoform_ac": "I3L691-1", "url": "https://www.uniprot.org/uniprotkb/I3L691/entry#I3L691-1", "sequence": { "sequence": "MAATPQLRDRLSFLHRLPLLLKGTSDDDTPCPGFLFEEIAKISHESLGSSQCLLEYLLSRLHSGSGRVKLKVLKILLHLCGHGSSASLLILRRNPAFIQEAAVFAGPPDPLHGNSLYQKVRAAAQDLGAALFSDALSPPPPSQPPRAPPPAGMGSQSRPQSALQGFGYSKDQRHTGSAGEAFLSTIQKAAEVVASAVRPGPESPGTQRPLPQGDAYQPAMTPSAGLGPPPGDPLPTAGPAARAVRHQPGQAGGGWDEPDSSPSSQNSSQESSDLGKASDSGSQSGSDSPSGASRAPSDLAERVEAVTLSDCQQELSLVQAVTRGLQTFLSREEVQHFVKECGVLNCEAVLELLLRHLGGTSERVQMRALGAIASLGCTDLLAQERVLLLARPRLQELSAGSPGPVTNKATKILRHFEASCRQWPPARRPLAEPGPAAARGGPSDLLTDALPLAGGQAFLQPLSSALFSSRGTAVPATALDGCSPPAPGDAREAEARLAASREQGSGSEWDPSGLDTPTGAPGLGPGPRLGHDSLFAGMELVACPRLVGAGAAEEEPLPAPWTASQRPAAQEPSGSEPSAFAFLNV", "length": 585, "header": "tr|I3L691-1|I3L691_PIG Isoform 1 of AP-4 complex accessory subunit Tepsin OS=Sus scrofa OX=9823 GN=TEPSIN PE=4 SV=2 CANONICAL=I3L691-1" }, "locus": { "chromosome": "12", "start_pos": 1528516, "end_pos": 1519771, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022504.3", "url": "https://www.ensembl.org/id/ENSSSCT00000022504.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019542.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019542.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 236, "start_aa": "Thr", "end_pos": 236, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr236", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 322, "start_aa": "Thr", "end_pos": 322, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr322", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L691", "url": "https://www.uniprot.org/uniprotkb/I3L691" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A3Q1MCN3-1", "protein_name": "AP-4 complex accessory subunit Tepsin", "gene_name": "TEPSIN", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAMPPLRDRLSFLHRLPILLKGTSDDDVPCPGYLFEEIAKISHESLGSSQCLLEYLLNRLHSGSGRVKLKVLKILLHLCGHGSSSFLLILKRNPAFIQEAAVFAGPPDPLHGNSLYQKVRAAAQDLGAALYSDALSPPPPSQPPRTLPPAGMGSQSRPQSALQGFGYSKERAHTGSAGEAFLSTIQKAAEVVASAVRPGPESPSCQRSLPRGDTYQPAVTPSTSLGTHASGSSLPAASPGARAARHQPGQAGGGWDELDSSPSSQDSSQENDDLGKASDSGSRSGSDSPSGASRAPSDLAERVEAVTLSDCQQELSLVRTVTQGQHTFLSREEVQHFVKECGLLNCEAVLELLIRHLAATSERVQMRALGAIASLGCTDLLSQERVLLLTRPRLQELSAGSPGPVTNKATKILRHFEASCRQWPPSRRSPAEPGPAAAHVGPSDLLTDTLPFTGGPAFLQPLSSALFFPKGSAPPSGLQPSPVPPTSPDSCPLPVPGAGRDAETGLAGSTDQGAASEQGPLYMDTPKGGPEIGLGLSHSCSSLFAGMELVACPRLVGAGTAAEEPLPAHQAPWTLSQRLAAKEPSGSEPSAFTFLNS", "length": 598 }, "evidence": [ { "id": "I3L691", "url": "https://omabrowser.org/oma/group/I3L691/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8V1ADF7-1", "protein_name": "TEPSIN adaptor related protein complex 4 accessory protein", "gene_name": "TEPSIN", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAVPLRDRLCFLSRLPVLLRGTADEEGPCPGFVLEEISKISRESAGSSQCLLEFLLGRLRSGSCHVKLKVLKILQHTCAQGSPQFLLQLRRNAAFIREAAAFTGPPDPLHGNSLNQKVRAAAQDLASFLFSDAALPTVTTLPARPLPPAGMGSKSSPCSSMQGFGFSSERGGSAGEALLSTIQRAAEAVASAVLPSPEGPPSHCGELHEDAYQPVTAPSPARSLASSTNPPAATTAHIARVSHQPGLAGGGWEEADSGHSSQNSSQENGDLSRTSDTYSKSGSDSHSGASRELVSGAERVDADSLGDCLREVSLVSALTQGARVFLTREEAQHFLKECGLLNCEVVLELLSRALEDPSDNVRMRSMSAISSLMCSDLLALDQIFAGTRQQLQQLSQGSPSPVANRATKILRQFEALCRGRPSPKPSRPRSAPSALAEGSAPCAGDLLTDIPPLPGESILQPLSAPTPPGSAPAVGTEPGLEAEPREQPGPTALPVPHGQEAARRSVGAVGTTAVPPHSPSLFAGMELMAPPGTALTPRTLPRPQDDTVPHPCNTEPSAFSFLNA", "length": 564 }, "evidence": [ { "id": "I3L691", "url": "https://omabrowser.org/oma/group/I3L691/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "E7F390-1", "protein_name": "AP-4 complex accessory subunit tepsin", "gene_name": "tepsin", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVSILERLVFLQKVPTLMRATSDDESPCPGYLFEEISKISHESVGCCQCLLEYLLERLQVESCHVKLKVLKILLHVCGHGPPHFLTELRRNATFIQEVIVYSGPPDPIHGNALYQKVRSSAQELASLLFNDSMSPDSVSSPHKSMTHSVGMGSESLRSGMQGFGSSPGRKESTSGTLLDKIQKAAEVVASAVLPPTEHPGLRLHDNHYHAVVAPSAAVEIAVPACAYNIQSHSHRTSHRCPGQAGGGWEETDSGHSSSHNSSQEIAEASQASMGRSSKSGGSGSHSGASRESGDLSERVEAIQLGDCGQETALINKLTSGSKVFLSREESQHFIKECSTLNCEVVVELLSRKLQDHTQIVQMRALCALACLMSSDFLSLDHIFNIIHKRLAQLSEGTTGPVANKATKLLRQFEALLGCVTNPRFDRIGRSSSTNLSSSDQPSTSITIPFISGQTGEPTTPVIPSEMAFTQGNSTAPGSHMNREQEEGEHRNTDTSKSSDPSRLSLFSGMELVNRSKPVCLVEPVPVDAQPCGEATTDTDCALEKRTAGSSTSAEQLSAFSFLNL", "length": 564 }, "evidence": [ { "id": "I3L691", "url": "https://omabrowser.org/oma/group/I3L691/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3U3N6-1", "protein_name": "AP-4 complex accessory subunit Tepsin", "gene_name": "Tepsin", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAVPPLRDRLSFLHRLPILLKGTSDDSIPCPGYLFEEIAKISHESLGSSQCLLEYLLNRLDSSSGHVKLKVLKILLYLCGHGSSSFLLILRRNSALIQEATAFSGPPDPLHGNSLYQKVRAAAQDLGSTLFSDAVPQPPSQPPQIPPPAGMGAQARPLSALQGFGYTKESSRTGSAGETFLSTIQRAAEVVANAVRPGPDNPCTKGPLPYGDSYQPAVTPSASHTHPNPGNLLPGAILGARAVRHQPGQAGGGWDELDSSPSSQNSSCTSNLSRASDSGSRSGSDSHSGTSREPGDLAERAEATPPNDCQQELNLVRTVTQGPRVFLSREETQHFIKECGLLNCEAVLELLLRQLVGTSECEQMRALCAIASFGSADLLPQEHVLLLCRQQLQELGAGSPGPVTNKATKILRHFEASCGQQLPTLRLCAQPNSAAAPVGPADLLTSPVPAPGSQVFLQPLSSATVVPRSPVLFPSPNTLPPSALEEPSEVRTQLVCSSEQGTESEQRLENTDTPEDSSSPLPWSPNSLFAGMELVACPRLPCHSSQDLQTDLQKVTTEAPVSEPSAFAFLNM", "length": 573 }, "evidence": [ { "id": "I3L691", "url": "https://omabrowser.org/oma/group/I3L691/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96N21-1", "protein_name": "AP-4 complex accessory subunit Tepsin", "gene_name": "TEPSIN", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAPPLRDRLSFLHRLPILLKGTSDDDVPCPGYLFEEIAKISHESPGSSQCLLEYLLSRLHSSSGHGKLKVLKILLYLCSHGSSFFLLILKRNSAFIQEAAAFAGPPDPLHGNSLYQKVRAAAQDLGSTLFSDTVLPLAPSQPLGTPPATGMGSQARPHSTLQGFGYSKEHGRTAVRHQPGQAGGGWDELDSGPSSQNSSQNSDLSRVSDSGSHSGSDSHSGASREPGDLAERVEVVALSDCQQELSLVRTVTRGPRAFLSREEAQHFIKACGLLNCEAVLQLLTCHLRGTSECTQLRALCAIASLGSSDLLPQEHILLRTRPWLQELSMGSPGPVTNKATKILRHFEASCGQLSPARGTSAEPGPTAALPGPSDLLTDAVPLPGSQVFLQPLSSTPVSSRSPAPSSGMPSSPVPTPPPDASPIPAPGDPSEAEARLAESRRWRPERIPGGTDSPKRGPSSCAWSRDSLFAGMELVACPRLVGAGAAAGESCPDAPRAPQTSSQRTAAKEPPGSEPSAFAFLNA", "length": 525 }, "evidence": [ { "id": "I3L691", "url": "https://omabrowser.org/oma/group/I3L691/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3L691", "url": "https://www.uniprot.org/uniprotkb/I3L691" } ], "pmid": "" }, { "name": "trans-Golgi network membrane", "id": "GO:0032588", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032588", "evidence": [ { "database": "UniProtKB", "id": "I3L691", "url": "https://www.uniprot.org/uniprotkb/I3L691" } ], "pmid": "" }, { "name": "coated vesicle membrane", "id": "GO:0030662", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030662", "evidence": [ { "database": "UniProtKB", "id": "I3L691", "url": "https://www.uniprot.org/uniprotkb/I3L691" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 266, "end_pos": 268, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L691-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 585, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L691-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L691" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L691", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L691" }, { "id": "PF25827", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF25827" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "AP-4 complex accessory subunit Tepsin VHS/ENTH-like", "eco_id": "ECO_0000259", "start_pos": 312, "end_pos": 416, "start_aa": "Gln", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 236, 322 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 266, "end_pos": 268 } ] }, 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"reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FCRL5", "url": "https://www.uniprot.org/uniprotkb/I3L6A1", "locus": {} } ], "crossref": [ { "id": "I3L6A1", "url": "https://alphafold.ebi.ac.uk/entry/I3L6A1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026210", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026210", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00096", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00096", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100155684", "url": "https://www.ncbi.nlm.nih.gov/gene/100155684", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003598", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003598", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003599", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003599", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR007110", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007110", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013783", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013783", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036179", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036179", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050488", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050488", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "HNQFIYS", "url": "https://omabrowser.org/oma/group/HNQFIYS/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L6A1", "url": "https://www.orthodb.org/?gene=I3L6A1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11481", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11481", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR11481:SF68", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11481:SF68", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13895", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13895", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13927", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13927", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013852383", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013852383", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L6A1", "url": "https://www.uniprot.org/uniprotkb/I3L6A1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6A1-1", "url": "https://www.uniprot.org/uniprotkb/I3L6A1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLLWVSLLVLAPVSGQFATEPKPVISLHPLWTTFFQGETVMLTCNTFRFHAPEKIKLYRWYLEGEIQSETLGNTHEVRETGMYKCQAQDSPPSDAVHLLFSSANLILQAPPYVFEKESVVLRCQAKANTELNGMTLYKHGEVLGVPKKTSEFRIYQAGLKDNGEYRCTGLKKDNETISSNAVKIEVQELFPRPVLKASSTQPTEEGTLTLTCETQLSSQRPDVQLQFRFFRDYTSPQPYWRSSPELQIFTIQREDSGSYRCEAQTVTPHLQKQSQQLQINVQRIVADVRLYSRPELVFEGKELVLICSVSGVPAPITVSFFKKRPWNKDTKIVTSSETEFKIPAVESSHAGEYYCAAGKNHRSFPSQTLTISVRVPVSRPVLTLRAPRAQPVVGDVAELHCEVQRGSLPIRYQFYHEAVALWSNSVSSKKAFFRFSLTEGHSGNYFCKADNNLGAQRSDTVSLSVRVPVSRPVLTLRAPRAQAVVGDVVELHCEVQKGSPPIRYQFYHKNVTLGNGTSLSGQGVSFNLSLTAEHSGNYSCEADNDLGPQCSEAVTLSITVMTGSRSGSVATSVTGGLLSLVGLAAVALLFYCWFPRKAGGRSTLDSSRNHSASDLHEPTYYNVPGWIELQPVYSNVNPKEGDIVYSEVRSVKRENRHAGAVASAPELLNDKDACVIYSQVKVASAPAPKPQLLDSSTPHR", "length": 700, "header": "tr|I3L6A1-1|I3L6A1_PIG Isoform 1 of Fc receptor like 5 OS=Sus scrofa OX=9823 GN=FCRL5 PE=4 SV=2 CANONICAL=I3L6A1-1" }, "isoforms": [ { "isoform_ac": "I3L6A1-1", "url": "https://www.uniprot.org/uniprotkb/I3L6A1/entry#I3L6A1-1", "sequence": { "sequence": 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"ENSSSCT00000022538.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022538.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019552.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019552.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6A1", "url": "https://www.uniprot.org/uniprotkb/I3L6A1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1LX58-1", "protein_name": "Fc receptor-like 5", "gene_name": "Fcrl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPGSFSCGVAFTQLWLTLLVVTPVNGQHEAVLQSVVYLQPPWTTFFQGEKVTLFCYGFGFYLPQKTKWYRKNKTQRQLRSTSTLEVRESGEYWCQADNFLPSMHVHLDFRQDSLVLQAPPAVFEGDSVVLRCHTREDIAAESLKFYKNGKALELSGPSSELHIHHANREDNGQYTCTGRKNWHLKYTPSNTVRVQVQELLPRPVLMATPSQPIDGSPVTLTCQIQLPAQRSNVQLQFCFLKNLQALESGCSNSSEFHIPAIWTEESTWYQCRAETVNSQTEKQSIALKIPVQRALADFQTYIMPASKLVYEGQSLLLNCSVNGVPGPLKFSWYKRDMLNKKANIPKSSGAEVKISKVNVSDAGEYYCEAKNSRRRFVSRAVPITIKVPVSQPVLTLSSGKTQALEGDLMTLHCKSQRGSPYILYEFYHENVSLGNSSTLSGEGGGASFNFSMSTERSGNYHCTADNGLGAQNSEAIWISVAEMTNNRSAPVIAGITVGLLITAVGVFLSYCWFSRQAGGKPASDESRSPSDAEPQEPTYYNMPACIELQPVYSNDPKEAVIYTEIRRTQPKPKPKRAGQLQRSNLQLLQSTVPALSCPQMVPQSMDSNETDNSPKTGPTSPSPLS", "length": 625 }, "evidence": [ { "id": "I3L6A1", "url": "https://omabrowser.org/oma/group/I3L6A1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68SN8-1", "protein_name": "Fc receptor-like protein 5", "gene_name": "Fcrl5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGSFSPCVVFTQMWLTLLVVTPVNGQHEAAQQSVVSLQPPWTTFFRGEVVTLTCYRFGFSVPQKTKWYQKRKTVKQTPGALVIKAHTLKVHESGEYWCQADSLLPSMHVNVEFSEDFLVLQAPPAVFEGDSVVLRCYAKKGIEAETLTFYKDGKALTLHPQSSEFYIHRANLKDNGQYKCTSKKKWSFGSLYTSNTVVVQVQELFPRPVLRARPSHPIDGSPVTLTCQTQLSAQKSDARLQFCFFRNLQLLGSGCSRSSEFHIPAIWTEESKRYQCKAETVNSQVSKQSTAFIIPVQRASARFQTHIIPASKLVFEGQLLLLNCSVKGVPGPLKFSWYKKDMLNKETKILKSSNAEFKISQVNISDAGEYYCEANNSRRSFVSRAFPITIKVPVSQPVLTLSTGKTQALEGDLMTLHCQSQRGSPCILYEFFYENVSLGNSSILSGGGAYFNFSMSTERSGNYYCTADNGLGAQCSEAIRISIFDMTKNRSVPMAAGITVGLLIMAVGVFLFYCWFSRKAGGKPTSDDSRNPSDSEPQEPTYYNVPACIELQPVYSNEPEENVIYTEVRRTQPRQKHADQESESPRSRCQMAEKK", "length": 596 }, "evidence": [ { "id": "I3L6A1", "url": "https://omabrowser.org/oma/group/I3L6A1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96LA5-1", "protein_name": "Fc receptor-like protein 2", "gene_name": "FCRL2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCP00000067389.1" } ] } }, { "isoform_ac": "I3L6I5-1", "url": "https://www.uniprot.org/uniprotkb/I3L6I5/entry#I3L6I5-1", "sequence": { "sequence": "MAVDIECRYSCMAPSLRRERFTFQISPKPSKPLRPCIQLSSKNEASGTVAPTVQEKKVKKRVSFADNQGLALTMVKVFSEFDDPLDIPLNITELLDNIVSLTTAESESFVLDFAQPSADYLDFRNRLQTDHVCLENCVLKDRAIEGTVKVQNLAFEKMVKVRMTFDTWKSFTDFPCWYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVCYECNGQTYWDSNKGKNYRIIRAELKSTQGTAQPQNGPDFGIALDQFGSPRCSYGLFPEWPSYLGYEKLGPYY", "length": 284, "header": "tr|I3L6I5-1|I3L6I5_PIG Isoform 1 of Protein phosphatase 1 regulatory subunit OS=Sus scrofa OX=9823 GN=PPP1R3B PE=4 SV=2 CANONICAL=I3L6I5-1" }, "locus": { "chromosome": "15", "start_pos": 56009710, "end_pos": 56008859, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026451.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026451.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019636.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019636.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6I5", "url": "https://www.uniprot.org/uniprotkb/I3L6I5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515931", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515931", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XFB6-1", "protein_name": "Protein phosphatase 1 regulatory subunit", "gene_name": "PPP1R3B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAVDVAMQLYLCSSPLRRERCACKIAPKPNKPLRPCIQLNSKAVLTGPEEAENSFTHNKVKKKVSFADSRGFALTMVKVFSEFDDPLDIPFNISELIDNIVSLTTVERDSFVLDFVQPSADYLDFRNRLQTDCVCLENCMLKERSVVGTVKVRNLAFEKSVRIRMTFDTWKNFVDYPCQYVKDTYGGSDRDTFSFDISLPDGIQSHERVEFAISFECNGKVYWDSNKGTNYRIIRSELKSAQEALRPPCSPDFSSAFDQFGSPRCAYGLFAEWPSYSGYEKLGPYY", "length": 286 }, "evidence": [ { "id": "I3L6I5", "url": "https://omabrowser.org/oma/group/I3L6I5/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A6QNP3-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "PPP1R3B", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": 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"url": "https://omabrowser.org/oma/group/I3L6I5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q6IN01-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "Ppp1r3b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAVDIEYSYSSMAPSLRRERFTFKISPKLNKPLRPCIQLGSKDEAGRMVAPTVQEKKVKKRVSFADNQGLALTMVKVFSEFDDPLDIPFNITELLDNIVSLTTAESESFVLDFPQPSADYLDFRNRLQTNHVCLENCVLKEKAIAGTVKVQNLAFEKVVKIRMTFDTWKSFTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVCYECNGQSYWDSNKGKNYRITRAELRSTQGMTEPYNGPDFGISFDQFGSPRCSFGLFPEWPSYLGYEKLGPYY", "length": 284 }, "evidence": [ { "id": "I3L6I5", "url": "https://omabrowser.org/oma/group/I3L6I5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L6K9-1", "uniprot_ac": "I3L6K9", "uniprot_id": "I3L6K9_PIG", "mass": { "chemical_mass": 86730.0, "monoisotopic_mass": 86730.0 }, "refseq": { "ac": "XP_020931906", "name": "pleckstrin homology domain-containing family M member 3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931906" }, "gene_names": [ { "name": "PLEKHM3", "type": "recommended", "evidence": [ { "id": "I3L6K9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6K9" } ] }, { "name": "PLEKHM3", "type": "synonym", "evidence": [ { "id": "XP_020931906", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931906" } ] } ], "protein_names": [ { "name": "Pleckstrin homology domain-containing family M member 3", "type": "recommended", "evidence": [ { "id": "I3L6K9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6K9/entry#names_and_taxonomy" } ] }, { "name": "pleckstrin homology domain-containing family M member 3", "type": "synonym", "evidence": [ { "id": "XP_020931906", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931906" } ] } ], "function": [ { "annotation": "Involved in skeletal muscle differentiation. May act as a scaffold protein for AKT1 during muscle differentiation.", "evidence": [ { "database": "UniProtKB", "id": "I3L6K9", "url": "https://www.uniprot.org/uniprotkb/I3L6K9#function" }, { "database": "UniProtKB", "id": "ARBA00054394", "url": "https://www.uniprot.org/uniprotkb/ARBA00054394#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L6K9", "url": "https://www.uniprot.org/uniprotkb/I3L6K9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PLEKHM3", "url": "https://www.uniprot.org/uniprotkb/I3L6K9", "locus": { "chromosome": "15", "start_pos": 110994410, "end_pos": 111185324, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016141", "url": "https://www.ensembl.org/id/ENSSSCG00000016141" } ] } } ], "crossref": [ { "id": "ENSSSCG00000016141", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016141", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd13327", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd13327", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd14674", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14674", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100520986", "url": "https://www.ncbi.nlm.nih.gov/gene/100520986", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR025258", "url": "https://www.ebi.ac.uk/interpro/entry/IPR025258", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037812", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037812", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051366", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051366", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100520986", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520986", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CVHRELH", "url": "https://omabrowser.org/oma/group/CVHRELH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L6K9", "url": "https://www.orthodb.org/?gene=I3L6K9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12326", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12326", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12326:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12326:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00169", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00169", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13901", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13901", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020931906", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020931906", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L6K9", "url": "https://www.uniprot.org/uniprotkb/I3L6K9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6K9-1", "url": "https://www.uniprot.org/uniprotkb/I3L6K9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEALEVDDISPALEVTEEFFSTFDSKLEKAVQHAEVYGIQEVPELVGHEVLGNIDNGAIRNVSSLGRGAVIWDHCKSRLLETKAQNVFPAKEQFTVQKGTTPDNLSWMEQKEASTFNFFNICQRRKDRPRSVNDLLDETSTFKPGHARSRSDITQVDWRVGLKTTPLQQQQQQQPSLLGSHFTRPSFLLPSSNKVEDAQGNTEHKQAFPNILKKGYLEIRKNHDSYWQSCYAELSPYNLYFYSLDSSGNQNLYATYQLSHFQSISVLGNLEARLVDTVLYDNTQLQLKAESPWEALDWGQKLWEGVHAAVPAYLGRPDELANSPGLGHHVDCAQNHCLQKKSSQLLMPSPVLDGPKQYQNILKSGTLYRLTVQNNWKAFTFVLSRSYLMAFQPGKLDEDPLLSYNVDVCLAVQLDNLDDCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKTAANAARSSEQNPQVTLRSKPKDQMGGHELRKNKRQSVTTSFLSILTTLSLERGLTAQSFKCAGCQRSIGLSYGKAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVSKQAKEFLEYVFEEPLIDIQQENPMLYGHAEPLATVVRLRQRLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKIIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKEKSVPCPRCVRRELQKKQKSFWRRLNMDESLEEACNMFELSYQNT", "length": 760, "header": "tr|I3L6K9-1|I3L6K9_PIG Isoform 1 of Pleckstrin homology domain-containing family M member 3 OS=Sus scrofa OX=9823 GN=PLEKHM3 PE=4 SV=2 CANONICAL=I3L6K9-1" }, "isoforms": [ { "isoform_ac": "I3L6K9-1", "url": "https://www.uniprot.org/uniprotkb/I3L6K9/entry#I3L6K9-1", "sequence": { "sequence": "MEALEVDDISPALEVTEEFFSTFDSKLEKAVQHAEVYGIQEVPELVGHEVLGNIDNGAIRNVSSLGRGAVIWDHCKSRLLETKAQNVFPAKEQFTVQKGTTPDNLSWMEQKEASTFNFFNICQRRKDRPRSVNDLLDETSTFKPGHARSRSDITQVDWRVGLKTTPLQQQQQQQPSLLGSHFTRPSFLLPSSNKVEDAQGNTEHKQAFPNILKKGYLEIRKNHDSYWQSCYAELSPYNLYFYSLDSSGNQNLYATYQLSHFQSISVLGNLEARLVDTVLYDNTQLQLKAESPWEALDWGQKLWEGVHAAVPAYLGRPDELANSPGLGHHVDCAQNHCLQKKSSQLLMPSPVLDGPKQYQNILKSGTLYRLTVQNNWKAFTFVLSRSYLMAFQPGKLDEDPLLSYNVDVCLAVQLDNLDDCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKTAANAARSSEQNPQVTLRSKPKDQMGGHELRKNKRQSVTTSFLSILTTLSLERGLTAQSFKCAGCQRSIGLSYGKAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVSKQAKEFLEYVFEEPLIDIQQENPMLYGHAEPLATVVRLRQRLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKIIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKEKSVPCPRCVRRELQKKQKSFWRRLNMDESLEEACNMFELSYQNT", "length": 760, "header": "tr|I3L6K9-1|I3L6K9_PIG Isoform 1 of Pleckstrin homology domain-containing family M member 3 OS=Sus scrofa OX=9823 GN=PLEKHM3 PE=4 SV=2 CANONICAL=I3L6K9-1" }, "locus": { "chromosome": "15", "start_pos": 111159718, "end_pos": 110995594, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023180.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023180.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019660.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019660.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6K9", "url": "https://www.uniprot.org/uniprotkb/I3L6K9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520986", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520986", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V1A9S0-1", "protein_name": "Pleckstrin homology domain containing M3", "gene_name": "PLEKHM3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEALEVDDISPALEVTEDFFNSFDTKLEKIVQPSGVFGVQDVPELVGHEVFDQITESRNLRNVASLAKSSLIWDHCKNGLLETKAQTVFSAKDQHVVQRGTAADNRAWAGEGETAAFNIFNICQRRRDRPRSVNDILVQNEEASTFKPGHNRSRSDISHVNWGVVFTGTSLQQPALPGQDNNCALLSYLALTKGQDIQGNTEHKPTFPNILKKGYLEIRRDNDSYWQTCYAELSPYKLYLYCLDSSGNQTLPTVYPLMHFQRVTVTGSIEAKVVEAVLSDNSQLQLKAESSWEALDWGRKLWEVMRASVSTFTRQPEQVENVPEPDNSSDRSQTNGLVEKPVELLLSMNLTENTKEYQNILKSGTLYRLTVQNNWKAFTFVLNRSYLMAFQPGRLDEDPLLSYNVDVCLSVQTDTQDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKTAANVTRSLGQNPQVTLRNKRGDRPFGNDFRKSKRQSVTTSFLSILTTLSLERGLTVQSFKCCQRSIGLSNGKAKVCSYSGWYYCCTCHVDDSFLIPARLVHNWDTSKYKVSKQAKEFLEYVYEEPLIDIQQENPMLYKHVESLATVVRLRQQLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKVKAVPCPRCVRKELQKKQKSFWRRLNMDENFEESCNMFELSYQNT", "length": 757 }, "evidence": [ { "id": "I3L6K9", "url": "https://omabrowser.org/oma/group/I3L6K9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0AAA9TU17-1", "protein_name": "Pleckstrin homology domain-containing family M member 3", "gene_name": "PLEKHM3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEALEVDDISPALEVTEDFFNTFDNKLEKAVQQAEVYGIQEVPELVGREVLGNIDNGAIRNVTSLGQGGVIWDHCKTRLLDTKVPNVFPAKEQFMVQKGTTPDNLSWMEQKEASTFNFFNICQRRRDRPRSVNDLLDETSTFKPGHARSRSDITQVDWRVVLKTMPLQQEVSLQGPHFARPSLLLSSSNKVEDAQGNTEHKPAFPNILKKGYLEIRKEHDSYWQSCYAELSPYSLYFYSLDSSGNQNLYATYQLSHFQSISVLGNLEARLVDTVLYDNTQLQLKAESPWEALDWGQKLWEGVHAAAPAYMGRPGELANSPGLGHHVDCPQNHCLQKKSRELLMPSPVLDSPKQYQNILKSGTLYRLTMQNNWKAFTFVLSRTCLMAFPPGKLDEDPLLSYNVDVCLAVQLDHLDDCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKTAANTARSSEQNLQVTLRTKPRDQMGGHELRKNKRQSVTTSFLSILTTLSLERGLTAQSFKCAGCQRSIGLSNGKAKVCSYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVSKQAKEFLEYVYEEPLIDIQQQNPMLYGHAEPLATVVRLRQRLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHAECKEKSVPCPRCVRRELQMKQKSFWRRLNMDESLEEACNMFELSYQNT", "length": 756 }, "evidence": [ { "id": "I3L6K9", "url": "https://omabrowser.org/oma/group/I3L6K9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0L3E5-1", "protein_name": "Pleckstrin homology domain-containing family M member 3", "gene_name": "Plekhm3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEALEVDDISPALEVTEDFFSTFDSKLGKAVQQAEVYGVQEVPELVGHEVLGNITDNGALRSVASLGKGTMIWDHCKSRLLETKAQNVFPAKEQLMVQRGTAPDNLSWMEQKEASTFNFFNICQRRRDRPRSVNDLLDETTTFKPGHARSRSDVTHVDWRVVLSTMPLQQQQQQQQASLHGPHFPRPSFLLSSSNKVEDAQGNTEHKQTFPNILKKGYLEIRKNHDSYWQSCYAELSPYNLNFYSLDSSGNQNLYATYQLSHFQSISVLGNLEARMVDTVLYDNSQLQLKAESPWEALDWGQKLWEVVHAAVPNYMARQEEKANSPGLGHHVDCAQNHCLQKKSSGLLASPVLDSPKQYQNILKSGTLYRLTVQNNWKAFTFVLSKAYLMAFHPGKLDEDPLLSYNVDVCLAVQTDNLDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKTAANAARSSEQNLQVTLRNKPKDQLGGHELRKNKRQSVTTSFLSILTTLSLERGLTAQSFKCAGCQRPIGLSNGKAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVSKQAKEFLEYVYEEPLIDIQQENPMLYLHAEPLATVARLRQRLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATAHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGSVFHSECKEKSVPCPRCVRRELQKKQKSFWRQLNVDESLEEACTMFELSYQNT", "length": 761 }, "evidence": [ { "id": "I3L6K9", "url": "https://omabrowser.org/oma/group/I3L6K9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3HU57-1", "protein_name": "Pleckstrin homology domain-containing family M member 3", "gene_name": "Plekhm3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEALEVDDISPALEVTEDFFSTFDSKLEKAVQQAEVYGIQEVPELVGHEVFSNITDNGALRNVVSLGSKGNMIWDHCKSRLLETKAQNVFPAKEQLMVQRGTAPDNLSWMEQKEASTFNFFNICQRRRDRPRSVNDLLDESTTFKPGHARSRSDVTHVDWRLVLGTMPLQQQQLSLQGPHFARPSFLLPSPSKVEDAQGNTEHKQTFPNILKKGYLEIRKNHDSYWQSCYAELSPYNLHFYSLDSSGNQSLYATYQLSQFQSISVLGNLEARMVDTVLSDNSQLQLKAESPWEALDWGQKLWEVVHAAAPNYMGRPDEPANSPGLGSQNHCLQKKSSGLLSSPVLHSPKQYQNILKSGTLYRLTVQNNWKAFTFVLSKAYLMAFHPGKLDEDPLLSYNVDVCLAVQIDNLDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKTAANAARSSEQNLQVTLRNKPKDQIGGHELRKNKRQSVTTSFLSILTTLSLERGLTAQSFKCAGCQRSIGLSNGKAKVCNYSGWYYCSSCHVDDSFLIPARVVHNWDTSKYKVSKQAKEFLEYVYEEPLIDIQQENPMLYLHAEPLATVVRLRQQLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKEKSVPCPRCVRRELQKKQKSFWRQLNVDESLEEACTMFELSYQNT", "length": 753 }, "evidence": [ { "id": "I3L6K9", "url": "https://omabrowser.org/oma/group/I3L6K9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q6ZWE6-1", "protein_name": "Pleckstrin homology domain-containing family M member 3", "gene_name": "PLEKHM3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEALEVDDISPALEVTEEFFSTLDSNLEKAVQQAEVYGIQEVPELVGHEVLSNITDNGAMRNVTSLGKGGMIWDHCKSRLLETKAQNVFPAKEQFMVQRGTTPDNLSWMEQKEASTFNFFNICQRRRDRPRSVNDLLDETSTFKPGHARSRSDITQVDWRVVLKTTPLQQQQQQQPLLQGPHVTRPSFLLPSPNKIEDAQGNTEHKQTFPNILKKGYLEIRKDHDSYWQSCYAELSPYNLYFYSLDSSGNQNLYATYQLSHFQSISVLGNLEARMVDTVLYDNTQLQLKAESPWEALDWGQKLWEVVHAAVPGYMGRQNELTISPGLGHHDDYTQNHSFQKKTSGLLPPSPVLDSSKQYQNILKSGTLYRLTVQNNWKAFTFVLSRAYLMAFQPGKLDEDPLLSYNVDVCLAVQMDNLDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKIAANVARSSEQNLQVTLRNKPKDQMGGHELRKNKRQSVTTSFLSILTTLSLERGLTAQSFKCAGCQRSIGLSNGKAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVSKQAKEFLEYVYEEPLIDIQQENAMLYHHAEPLAAVLRLRQRLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATSHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKEKSVPCPRCVRRELQKKQKSFWQRLNMDESLEEACTMFELSYQNT", "length": 761 }, "evidence": [ { "id": "I3L6K9", "url": "https://omabrowser.org/oma/group/I3L6K9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BM47-1", "protein_name": "Pleckstrin homology domain-containing family M member 3", "gene_name": "Plekhm3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEALEVDDISPALEVTEDFFSTFDSKLEKAVQQAEVYGIQEVPELVGHEVLGNIADNGALRSVASLGKGTMIWDHCKSRLLETKAQNVFPAKEQLMVQRGTAPDNLSWMAQKEASTFNFFNICQRRRDRPRSVNDLLDETTTFKPGHARSRSDVTHVDWRVVLSTMPLQQQQQQQQASLQGIHFPGPSFLLSSPSKVEDAQGNTEHKQTFPNILKKGYLEIRKNHDSYWQSCYAELSPYNLNFYSLDSSGNQNLYATYQLSHFQSISVLGNLEARMVDTVLYDNSQLQLKAESPWEALDWGQKLWEVVHAAVPNYMGRQGEMANSPGLIHHGDCAQNHCLQKKSSGLLASPVLDSPKQYQNILKSGTLYRLTVQNNWKAFTFVLSKAYLMAFHPGKLDEDPLLSYNVDVCLAVQIDNLDGCDSCFQVIFPQDVLRLRAETRQRAQEWMEALKTAANAARSSEQNLQVTLRNKPKDQLDGRELRKNKRQSVTTSFLSILTTLSLERGLTAQSFKCAGCQRSIGLSNGKAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVSKQAKEFLEYVYEEPLIDIQQENPMLYLHAEPLATVVRLRQRLKSLRAYLFSCRAAVAEDLRRRIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATAHVYSCSLCSQKGFICEICNNGEILYPFEDISTSRCESCGAVFHSECKEKSVPCPRCVRRELQKKQKSFWRQLNVDESLEEACAMFELSYQST", "length": 761 }, "evidence": [ { "id": "I3L6K9", "url": "https://omabrowser.org/oma/group/I3L6K9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3L6K9", "url": "https://www.uniprot.org/uniprotkb/I3L6K9" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3L6K9", "url": "https://www.uniprot.org/uniprotkb/I3L6K9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L6K9", "url": "https://www.uniprot.org/uniprotkb/I3L6K9" } ], "pmid": "" } ] }, { "name": "Biological 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", 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"UniProtKB", "id": "I3L6L7", "url": "https://www.uniprot.org/uniprotkb/I3L6L7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SERTAD1", "url": "https://www.uniprot.org/uniprotkb/I3L6L7", "locus": { "chromosome": "6", "start_pos": 48698849, "end_pos": 48702400, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026931", "url": "https://www.ensembl.org/id/ENSSSCG00000026931" } ] } } ], "crossref": [ { "id": "ENSSSCG00000026931", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026931", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100624989", "url": "https://www.ncbi.nlm.nih.gov/gene/100624989", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "I3L6L7", "url": "https://www.ebi.ac.uk/intact/interactors/id:I3L6L7*", "database": "IntAct", "categories": [ "Other" ] }, { "id": "IPR009263", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009263", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052262", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052262", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624989", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624989", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LAVDTWW", "url": "https://omabrowser.org/oma/group/LAVDTWW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L6L7", "url": "https://www.orthodb.org/?gene=I3L6L7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16277", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16277", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16277:SF12", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16277:SF12", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06031", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06031", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003355962", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355962", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L6L7", "url": "https://www.uniprot.org/uniprotkb/I3L6L7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6L7-1", "url": "https://www.uniprot.org/uniprotkb/I3L6L7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMLSKGLKRKREEEEEEEKEALAVDAWWLDSGHPAVAQAPQSVASSSLFDLSVLKLHHSLRQSEPDLRHLVLVVNTLRRIQASMAPAAALPPVPTPPTSPGVVDNLLTSSDAALSASMASLLEDLSHIEGLSQAPQPLVDEGPPGRPTGGAPPSLGALDLLGPATGCLLDDGLEGLFEDIDTSMYDSELWAPASEGHKSSPEGGPGKEEAPELDEAELDYLMDVLVGTQALERPPGPGR", "length": 239, "header": "tr|I3L6L7-1|I3L6L7_PIG Isoform 1 of SERTA domain containing 1 OS=Sus scrofa OX=9823 GN=SERTAD1 PE=4 SV=2 CANONICAL=I3L6L7-1" }, "isoforms": [ { "isoform_ac": 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Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6L7", "url": "https://www.uniprot.org/uniprotkb/I3L6L7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624989", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624989", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3HNQ8-1", "protein_name": "SERTA domain-containing protein 1", "gene_name": "Sertad1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLSKGLKRKREEEEKKEEEGLSVDSWWLDQGHPAAAQTPPPVASSSLFDLSVLKLHHSLRQGEPDLRHLVLVVNTLRRIQESMEPTTSLPPVSMPPTAPSVADSLLASSDAALSASMASLLEDLNHIEDLNQVPQPQADEGPPGRSVGGVPPNLGALDLLGPATGCLLDDGLEGLFEDIDTSMYDSELWVPASEGLKPGPENGPAKEETPELDEAELDYLMDVLVGTQALERPPGPGR", "length": 238 }, "evidence": [ { "id": "I3L6L7", "url": "https://omabrowser.org/oma/group/I3L6L7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q6P771-1", "protein_name": "SERTA domain containing 1", "gene_name": "Sertad1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSKGLKRKREEEETMESLSVDSWWLDQSRPAVAQTPATVASSSLFDLSVVKLHHSLRQSEPDLRHLVLVVNTLRRIQASMEPTTVLPPEPIQPTAPSVADNFLSSSDAGLSASMASLLEDLSHIEDLNQVPQPQADEGPPGRSVGGVLPNLGALDLLGPATGCLLDDGLEGLFEDIDTSMYDSELWLPASEGLKPVPENGPAKEETPELDEAELDYLMDVLVGTQALERPPGPGR", "length": 236 }, "evidence": [ { "id": "I3L6L7", "url": "https://omabrowser.org/oma/group/I3L6L7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9JL10-1", "protein_name": "SERTA domain-containing protein 1", "gene_name": "Sertad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSKGLKRKREEEETMEALSVDSCWLDPSHPAVAQTPPTVASSSLFDLSVVKLHHSLRQSEPDLRHLVLVVNTLRRIQASMEPAPVLPPEPIQPPAPSVADSLLASSDAGLSASMASLLEDLNHIEDLNQAPQPQADEGPPGRSIGGISPNLGALDLLGPATGCLLDDGLEGLFEDIDTSMYDSELWLPASEGLKPGPENGPAKEEPPELDEAELDYLMDVLVGTQALERPPGPGR", "length": 236 }, "evidence": [ { "id": "I3L6L7", "url": "https://omabrowser.org/oma/group/I3L6L7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UHV2-1", "protein_name": "SERTA domain-containing protein 1", "gene_name": "SERTAD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MLSKGLKRKREEEEEKEPLAVDSWWLDPGHTAVAQAPPAVASSSLFDLSVLKLHHSLQQSEPDLRHLVLVVNTLRRIQASMAPAAALPPVPSPPAAPSVADNLLASSDAALSASMASLLEDLSHIEGLSQAPQPLADEGPPGRSIGGAAPSLGALDLLGPATGCLLDDGLEGLFEDIDTSMYDNELWAPASEGLKPGPEDGPGKEEAPELDEAELDYLMDVLVGTQALERPPGPGR", "length": 236 }, "evidence": [ { "id": "I3L6L7", "url": "https://omabrowser.org/oma/group/I3L6L7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": 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"MHGHGGYDSDFSDDEHCGESSKRKKRTAEDDLLLKKPFQKEKHGKVVHKQVAAELLDREEARNRRFHLIAMDAYQRHTKFVNDYILYYGGKKEDFRRSRENDKTDMDVIRENHRFLWNEEDEMDMNWEKRLAKKYYDKLFKEYCIADLSRYKENKFGFRWRVEREVISGKGQFCCGNKCCDKKEGLKSWEVNFGYIEHGEKRNALVKLRLCQECSFKLNFHHRRKEVKSKKRKDKTKKDCGESSHKKSRLSSVEEKDKAHSSSVKSENSINRNSDEEESTSESDLWKGPLPETDEKSQEEEFDEYFQDLFL", "length": 311, "header": "tr|I3L6Q2-1|I3L6Q2_PIG Isoform 1 of FRA10A associated CGG repeat 1 OS=Sus scrofa OX=9823 GN=FRA10AC1 PE=4 SV=1 CANONICAL=I3L6Q2-1" }, "isoforms": [ { "isoform_ac": "I3L6Q2-1", "url": "https://www.uniprot.org/uniprotkb/I3L6Q2/entry#I3L6Q2-1", "sequence": { "sequence": "MHGHGGYDSDFSDDEHCGESSKRKKRTAEDDLLLKKPFQKEKHGKVVHKQVAAELLDREEARNRRFHLIAMDAYQRHTKFVNDYILYYGGKKEDFRRSRENDKTDMDVIRENHRFLWNEEDEMDMNWEKRLAKKYYDKLFKEYCIADLSRYKENKFGFRWRVEREVISGKGQFCCGNKCCDKKEGLKSWEVNFGYIEHGEKRNALVKLRLCQECSFKLNFHHRRKEVKSKKRKDKTKKDCGESSHKKSRLSSVEEKDKAHSSSVKSENSINRNSDEEESTSESDLWKGPLPETDEKSQEEEFDEYFQDLFL", "length": 311, "header": "tr|I3L6Q2-1|I3L6Q2_PIG Isoform 1 of FRA10A associated CGG repeat 1 OS=Sus scrofa OX=9823 GN=FRA10AC1 PE=4 SV=1 CANONICAL=I3L6Q2-1" }, "locus": { "chromosome": "14", "start_pos": 105167488, "end_pos": 105127037, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064837.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064837.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035733.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035733.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6Q2", "url": "https://www.uniprot.org/uniprotkb/I3L6Q2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100157308", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100157308", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4IK46-1", "protein_name": "Protein FRA10AC1", "gene_name": "fra10ac1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSDMDKSALDLVKVHGGGGYDSDFSDDDGGGHSKDGENRAGQDELLQKPFQKGKHTKVAHKNVAAHEWDREEARNRRQHLISMNAFERHKKFVSDYILYYGGKIEDLRRSTSKDKTDLDVVKENHRFLWKEEDEEDMTWEKELAKKYYDKLFKEYCIADLSRYKENKFGFRWRIENEVISGKGQFLCGNKRCESKEGLKSWEVNFAYVEQGEKRNALVKLRLCPECSYKLNYHHKRKEVTAKKRRRSKENLDVSKKSKSSKSRKNKRKDKRKHKKRRKEHSSSSSEESQESDKGSDDDDDDEDADGPSESEHWKGPAPAVEEKSREEEFDEYFEDMFL", "length": 339 }, "evidence": [ { "id": "I3L6Q2", "url": "https://omabrowser.org/oma/group/I3L6Q2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F4JJC3-1", "protein_name": "Folate-sensitive fragile site protein", "gene_name": "DL3556W", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MTSSAAIRSDIYDREERKHRVCRQYQAHIRGLNAYERHKKFLKDYVRFYGKDKPAEVKLPVKTDQDTLREGYRFIRSEEDDLDPSWEQRLVKRYYDKLFKEYCIADMSRYKTGKMGLRWRTEKEVMTGKGQFMCGSKHCDEKEGLASYEVNFSYHEAGEDKQALVKLVACERCAEKLYYKKRKEGERSESKEKKKQKRKRSKSHSEDDTDEEEKRKEGERSESNEKKKQKRNRSQSHSEYDTDEEDRRKGKTRKSKLESADREGKDDENFDEYMEGMFPGNG", "length": 282 }, "evidence": [ { "id": "I3L6Q2", "url": "https://omabrowser.org/oma/group/I3L6Q2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5FVF1-1", "protein_name": "Protein FRA10AC1 homolog", "gene_name": "Fra10ac1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MHGHGGYDSDFSDDEQGGGSSKKRKKTVEDELLLTKPFQKEKYGKVAHKQVAADLLDREEARNRRFHLIAMDAYQRHTKFVNDYILYYGGKREDFKRLGENDKTDLDVIRENHRFLWNEEDEADMTWEKRLAKKYYDKLFKEYCIADLSRYKENKFGFRWRIEKEVISGKGQFFCGNKCCDEKEGLKSWEVNFGYTEHGEKRNALVKLRLCQECSFKLNFHHRRKEIKSTKKRSKTKTESDESPHKNSRSSSSEEASQGKDEGHSSSKRSEDSRNRNAGEEDSASDSELWKGPLPETDEKSQEEEFDDYFQDLFL", "length": 315 }, "evidence": [ { "id": "I3L6Q2", "url": "https://omabrowser.org/oma/group/I3L6Q2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70Z53-1", "protein_name": "Protein FRA10AC1", "gene_name": "FRA10AC1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MHGHGGYDSDFSDDERCGESSKRKKRTVEDDLLLQKPFQKEKHGKVAHKQVAAELLDREEARNRRFHLIAMDAYQRHTKFVNDYILYYGGKKEDFKRLGENDKTDLDVIRENHRFLWNEEDEMDMTWEKRLAKKYYDKLFKEYCIADLSKYKENKFGFRWRVEKEVISGKGQFFCGNKYCDKKEGLKSWEVNFGYIEHGEKRNALVKLRLCQECSIKLNFHHRRKEIKSKKRKDKTKKDCEESSHKKSRLSSAEEASKKKDKGHSSSKKSEDSLLRNSDEEESASESELWKGPLPETDEKSQEEEFDEYFQDLFL", "length": 315 }, "evidence": [ { "id": "I3L6Q2", "url": "https://omabrowser.org/oma/group/I3L6Q2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BP78-1", "protein_name": "Protein FRA10AC1 homolog", "gene_name": "Fra10ac1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHGHGGYDSDFSDDEQGGGSSKKRKKTVEDELLLTKPFQKERHGKVAHKQVAADLLDREEARNRRFHLIAMDAYQRHTKFVNDYILYYGGKREDFKRLGENDKTDLDVIRENHRFLWNEEDEADMTWEKRLAKKYYDKLFKEYCIADLSRYKENKFGFRWRIEKEVISGKGQFFCGNKCCNEKEGLRSWEVNFGYTEHGEKRNALVKLRLCQECSFKLNFHHRRKEIKSTKKKSKTTPECDESPRKKSRSPPSEEASKGKDEGHSSSKKSEDSRNRNAEEEDSASDSELWKGPLPETDEKSQEEEFDDYFQDLFL", "length": 315 }, "evidence": [ { "id": "I3L6Q2", "url": "https://omabrowser.org/oma/group/I3L6Q2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L6Q2", "url": "https://www.uniprot.org/uniprotkb/I3L6Q2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mRNA splicing, via spliceosome", "id": "GO:0000398", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000398", "evidence": [ { "database": "UniProtKB", "id": "I3L6Q2", "url": "https://www.uniprot.org/uniprotkb/I3L6Q2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "phosphatase activity", "id": "GO:0016791", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016791", "evidence": [ { "database": "UniProtKB", "id": "I3L6Q2", "url": "https://www.uniprot.org/uniprotkb/I3L6Q2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", 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"total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L6T8-1", "uniprot_ac": "I3L6T8", "uniprot_id": "I3L6T8_PIG", "mass": { "chemical_mass": 102434.0, "monoisotopic_mass": 102434.0 }, "refseq": { "ac": "XP_020926139", "name": "HMG box transcription factor BBX isoform X9", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926139" }, "gene_names": [ { "name": "BBX", "type": "recommended", "evidence": [ { "id": "I3L6T8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ] }, { "name": "BBX", "type": "synonym", "evidence": [ { "id": "XP_020926139", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926139" } ] } ], "protein_names": [ { "name": "HMG box transcription factor BBX", "type": "recommended", "evidence": [ { "id": "I3L6T8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6T8/entry#names_and_taxonomy" } ] }, { "name": "Bobby sox 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"categories": [ "Protein Classification", "Other" ] }, { "id": "PF09667", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09667", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020926139", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926139", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AGY0", "url": "https://www.uniprot.org/uniprotkb/A0A287AGY0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AGY0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AGY0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AR78", "url": "https://www.uniprot.org/uniprotkb/A0A287AR78", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AR78-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AR78-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYF8", "url": "https://www.uniprot.org/uniprotkb/A0A287AYF8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AYF8-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AYF8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B526", "url": "https://www.uniprot.org/uniprotkb/A0A287B526", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B526-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B526-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6T8-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSGTCRPDVSESSELRQKSPLFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIKAKEADGGRIKELEKGKEEREIKMEKPDEARLQKEADVEKSAKENGRDSKELRNFEELRMDDIMGIKMEDPKDIKKEELEEDQKCSHFPDFSYSASSKIIISDVPSRKDHLCHPHGIMIIEDPTTLNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFLSISASKNIPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKIETCGFRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDQEGCWNEESWTFNQIGTSGSKKFKKTKPKEDSLLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGSMSSEPTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSNKQFFLDAIHPTEAIFSEDKNTTEPAYKVKNAPSIPNTPEPTTMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKVTEAGCNDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 916, "header": "tr|I3L6T8-1|I3L6T8_PIG Isoform 1 of HMG box transcription factor BBX OS=Sus scrofa OX=9823 GN=BBX PE=4 SV=2 CANONICAL=I3L6T8-1" }, "isoforms": [ { "isoform_ac": "A0A287AGY0-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T8/entry#A0A287AGY0-1", "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSSTSHPDAPSKQCQASALFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIKAKEADGGRIKELEKGKEEREIKMEKPDEARLQKEADVEKSAKENGRDSKELRNFEELRMDDIMGIKMEDPKDIKKEELEEDQKCSHFPDFSYSASSKIIISDVPSRKDHLCHPHGIMIIEDPTTLNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFLSISASKNIPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKIETCGFRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDQEGCWNEESWTFNQIGTSGSKKFKKTKPKEDSLLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGSMSSEPTKTSKGSGDKWSNKQFFLDAIHPTEAIFSEDKNTTEPAYKVKNAPSIPNTPEPTTMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKVTEAGCNDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 884, "header": "tr|A0A287AGY0-1|A0A287AGY0_PIG Computationally mapped isoform of HMG box transcription factor BBX OS=Sus scrofa OX=9823 GN=BBX PE=4 SV=3 CANONICAL=I3L6T8-1" }, "locus": { "chromosome": "13", "start_pos": 151818690, "end_pos": 151724172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043746.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043746.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000043127.3", "url": "https://www.ensembl.org/id/ENSSSCP00000043127.3" } ] } }, { "isoform_ac": "A0A287AR78-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T8/entry#A0A287AR78-1", "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSGTCRPDVSESSELRQKSPLFQFAEISSSTSHPDAPSKQCQASALFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIKAKEADGGRIKELEKGKEEREIKMEKPDEARLQKEADVEKSAKENGRDSKELRNFEELRMDDIMGIKMEDPKDIKKEELEEDQKCSHFPDFSYSASSKIIISDVPSRKDHLCHPHGIMIIEDPTTLNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFLSISASKNIPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKIETCGFRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDQEGCWNEESWTFNQIGTSGSKKFKKTKPKEDSLLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGSMSSEPTKTSKAIFSEDKNTTEPAYKVKNAPSIPNTPEPTTMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKVTEAGCNDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 891, "header": "tr|A0A287AR78-1|A0A287AR78_PIG Computationally mapped isoform of HMG box transcription factor BBX OS=Sus scrofa OX=9823 GN=BBX PE=4 SV=2 CANONICAL=I3L6T8-1" }, "locus": { "chromosome": "13", "start_pos": 151818690, "end_pos": 151724172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000061993.3", "url": "https://www.ensembl.org/id/ENSSSCT00000061993.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000046579.2", "url": "https://www.ensembl.org/id/ENSSSCP00000046579.2" } ] } }, { "isoform_ac": "A0A287AYF8-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T8/entry#A0A287AYF8-1", "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSGTCRPDVSESSELRQKSPLFQFAEISSSTSHPDAPSKQCQASALFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIKAKEADGGRIKELEKGKEEREIKMEKPDEARLQKEADVEKSAKENGRDSKELRNFEELRMDDIMGIKMEDPKDIKKEELEEDQKCSHFPDFSYSASSKIIISDVPSRKDHLCHPHGIMIIEDPTTLNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFLSISASKNIPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKIETCGFRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDQEGCWNEESWTFNQIGTSGSKKFKKTKPKEDSLLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGSMSSEPTKTSKGSGDKWSNKQFFLDAIHPTEAIFSEDKNTTEPAYKVKNAPSIPNTPEPTTMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKVTEAGCNDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 911, "header": "tr|A0A287AYF8-1|A0A287AYF8_PIG Computationally mapped isoform of HMG box transcription factor BBX OS=Sus scrofa OX=9823 GN=BBX PE=4 SV=2 CANONICAL=I3L6T8-1" }, "locus": { "chromosome": "13", "start_pos": 151818690, "end_pos": 151724172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053558.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053558.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049189.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049189.2" } ] } }, { "isoform_ac": "A0A287B526-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T8/entry#A0A287B526-1", "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSGTCRPDVSESSELRQKSPLFQFAEISSSTSHPDAPSKQCQASALFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIKAKEADGGRIKELEKGKEEREIKMEKPDEARLQKEADVEKSAKENGRDSKELRNFEELRMDDIMGIKMEDPKDIKKEELEEDQKCSHFPDFSYSASSKIIISDVPSRKDHLCHPHGIMIIEDPTTLNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFLSISASKNIPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKIETCGFRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDQEGCWNEESWTFNQIGTSGSKKFKKTKPKEDSLLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGSMSSEPTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSNKQFFLDAIHPTEDDKPKEQLQRSLPKVTEAGCNDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 875, "header": "tr|A0A287B526-1|A0A287B526_PIG Computationally mapped isoform of HMG box transcription factor BBX OS=Sus scrofa OX=9823 GN=BBX PE=4 SV=2 CANONICAL=I3L6T8-1" }, "locus": { "chromosome": "13", "start_pos": 151818690, "end_pos": 151724172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000037798.3", "url": "https://www.ensembl.org/id/ENSSSCT00000037798.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051540.3", "url": "https://www.ensembl.org/id/ENSSSCP00000051540.3" } ] } }, { "isoform_ac": "I3L6T8-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T8/entry#I3L6T8-1", "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSGTCRPDVSESSELRQKSPLFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIKAKEADGGRIKELEKGKEEREIKMEKPDEARLQKEADVEKSAKENGRDSKELRNFEELRMDDIMGIKMEDPKDIKKEELEEDQKCSHFPDFSYSASSKIIISDVPSRKDHLCHPHGIMIIEDPTTLNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEKLGETPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFLSISASKNIPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKIETCGFRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDQEGCWNEESWTFNQIGTSGSKKFKKTKPKEDSLLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGSMSSEPTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSNKQFFLDAIHPTEAIFSEDKNTTEPAYKVKNAPSIPNTPEPTTMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKVTEAGCNDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 916, "header": "tr|I3L6T8-1|I3L6T8_PIG Isoform 1 of HMG box transcription factor BBX OS=Sus scrofa OX=9823 GN=BBX PE=4 SV=2 CANONICAL=I3L6T8-1" }, "locus": { "chromosome": "13", "start_pos": 151818690, "end_pos": 151724172, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024394.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024394.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019740.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019740.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZRG6-1", "protein_name": "HMG box transcription factor BBX", "gene_name": "Bbx", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEDEEEEDIDKVQLVEADGLEQDVGETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPTAKKAKTEEVPQLNFGMADPTQMGGLSMLLLAGEHALGTPEASSGTCRPDISESPELRQKSPLFQFAEISSRTSHPDAPSKQCQASALFQFAEISSSTSQLGGTEPVKRCGNSALFQLAEMCLASEGVKMEGTELTKSKDSDGGRIEEMEKGKEERDMKMEKTIETAFQAEAEFGKSAKGNIREPKDLRDIEQLQSDNVMAIKVEDPKDSRKESDDDQKYSHFPDFSYSASSKIIISDVPSRKDHMCHPHGIMIIEDPTALNKPEKIKKKKKKNKLDRHGNDRSTPKKACKKRQSSESDIESVMYTIEAVAKGDWGADRLGETPRKKVRTSSSGKGGILDAKPPKKKVKSKEKKVSKEKCSDITKESRPPDFLNISASKSVPGEVPESMKAEPLTPTEDALPPSLPGQAKPEDSDCHRKTETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWSEESWTFNQSGTSGSKKFKKKLREDSFLGSAKLDEEFEKKFNSLPQYSPITFDRKCVSIPRKKKKTGNMSSESTKASKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSHKQFFLDAIHPTEAIFSEDKNTTEPAYKVKNALSIPNTPEPTAMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRRLPKVPETFCGDNCSHTTVEEPRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQLNSPMMDSQKKCRRLLYLFLALTSDAPFNCKTLCFTFYPSLVFTRDASESMWWEVQTADKGLLPHTAQNHLKQNLAFWAHLLFQKPQFLRAVFLCDTEQKQRDPHLCFAWRKAFDGDQW", "length": 1031 }, "evidence": [ { "id": "I3L6T8", "url": "https://omabrowser.org/oma/group/I3L6T8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7JPA7-1", "protein_name": "HMG box transcription factor BBX", "gene_name": "Bbx", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKGSNRNKDHSAEGEGAGKRPKRKCLQWHPLLAKKLLDFSEEEEEDEEEEDIDKVQLLEADGLEQDVGETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPTPKKAKTEEIPQLNFGMADPTQMGGLSMLLLAGEHALGTPEASTGPCRPDISESPELRQKSPLFQFAEISSRTSQPDGPSKQCQASALFQFAEISSSTSQLGGPEPVKRCGNSALFQLAEMCLASEGMKMDETKLIKSKESDGGRIKEMEKGKEERDIKMEKNNEAGFQKEAEFEKPSKENIREPKDLKNFEELQMDNVMAIKMEDPKEVRKESEDDQKYSHFPDFSYSASSKIIISDVPSRKEHMCHPHGIMIIEDPTALNKPEKIKKKKKKNKLDRHGNDKSTPKKTCKKRQSSESDIESVMYTIEAVAKGDWGVDKLGETPRKKVRTSSSGKGGILDVKPPKKKVKSKEKKVSKEKCSDITKESRPPDFLNISASKNAPGEVPEGMKAEPLTPTEDALPPSLPGQTKPEDSDCHRKTETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWSEESWTFNQSGTSGSKKFKKKLREDSFLGSAKLDEEFEKKFNSLPQYSPLTFDRKCVSIPRKKKKTGNMSSESTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSHKQFFLDSIHPTEAIFPEDKNTAEPAYKVKNALSIPNTPEPAMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRRLPKVTEAYCSDDCSHNTIEEPRSNTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 937 }, "evidence": [ { "id": "I3L6T8", "url": "https://omabrowser.org/oma/group/I3L6T8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "F1MYS0-1", "protein_name": "HMG box transcription factor BBX", "gene_name": "BBX", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKGSNRNKDHSAEGEGTGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVGETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPAPTTVNPRKKLWAFPSDSSRDLPSPKKTKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEISSGTCRPDVPESSELRQKSPLFQFAEISSSTSHPDAPSKQCQASALFQFAEISSNTSHLGGAEPVKRCGKSALFQLAEMCLASEGVKMEESKLIRTKELDGGRIKELEKGKEERDTKMEKTDEARLQKEAEFEKSAKENVRDSKEIRNFEELRMDDIIGIKMEAPKEIKKEELEEDQKCGHFPDFSYSASSKIIISDVPSRKDHICHPHGIMIIEDPTALSKPEKLKKKKKKNKMDRHGNDKSTPKKACKKRQSSESDIESVMYTIEAVAKGDWGIEKLGDTPRKKVRPSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDPTKESRPPDFISISASKNISGEVPEGIKAEPLTPTEDALPPTLSGQAKPEDSDCHRKIETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWNEESWTFSQSGTSGSKKFKKTKPKEDSVLGSTKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGNMSAEPTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSSKQLFLDAIHPTEAIFSEDKNTTEPAYKVKNALSIPNTPEPTTTQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPREQLQRSLPKVTETGCSDECSHNREAAETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 942 }, "evidence": [ { "id": "I3L6T8", "url": "https://omabrowser.org/oma/group/I3L6T8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8VBW5-1", "protein_name": "HMG box transcription factor BBX", "gene_name": "Bbx", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGSNRNKDHSTEGEGDGKRPKRKCLQWHPLLAKKLLDFSEEEEEDEEEEDIDKVQLLEADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRWCPTTNKPVKSPTPTVNPRKKLWAFPPDSSRDLPTPKKAKTEVPQLNFGMADPTQMGGLSMLLLAGEHALGTPEASSGTCRPDISESPELRQKSPLFQFAEISSRTSHPDAPSKQCQASALFQFAEISSSTSQLGGTEPVKRCGNSALFQLAEMCLASEGVKMEDTKLIKSKESDGGRIEEIEKGKEERGTEVEKTTETSFQKEAEFGKSAKGNVRESKDLRDIEQLQMDNVMAIKVEDPKEIRKEPEDDQKYSHFPDFSYSASSKIIISGVPSRKDHMCHPHGIMIIEDPTTLNKPEKIKKKKKKNKLDRHGNDKSTPKKTCKKRQSSESDIESVMYTIEAVAKGDWGVDKLGETPRKKVRPSSSGKGGILDAKPPKKKVKSKEKKVSKEKCSDITKESRPPDFLSISASKSVPGEVPEGIKAEPLTPTEDALPPSLPGQAKPEDSDCHRKTETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWSEESWTFNQSGTSGSKKFKKKLREDSFLGSAKLDEEFEKKFNSLPQYSPITFDRKCVSTPRKKKKTGNMSSESTKTSKGSGDKWSHKQFFLDAIHPTEAIFSEDKSTTEPAFKVKNALSIPNTPEPTTMQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKVPGTYCGDNCSHSTVEEPRSSTPDMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 907 }, "evidence": [ { "id": "I3L6T8", "url": "https://omabrowser.org/oma/group/I3L6T8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WY36-1", "protein_name": "HMG box transcription factor BBX", "gene_name": "BBX", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGSNRNKDHSAEGEGVGKRPKRKCLQWHPLLAKKLLDFSEEEEEEDEEEDIDKVQLLGADGLEQDVGETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTNKPVKSPTPTVNPRKKLWAFPSDSSRDLPSPKKAKTEEMPQLNFGMADPTQMGGLSMLLLAGEHALGTPEVSSGTCRPDVSESPELRQKSPLFQFAEISSSTSHSDASTKQCQTSALFQFAEISSNTSQLGGAEPVKRCGKSALFQLAEMCLASEGMKMEESKLIKAKESDGGRIKELEKGKEEKEIKMEKTDETRLQKEAEFEKSAKENLRDSKELRNFEALQIDDIMAIKMEDPKEIRKEELEEDHKCSHFPDFSYSASSKIIISDVPSRKDHMCHPHGIMIIEDPAALNKPEKLKKKKKKSKMDRHGNDKSTPKKTCKKRQSSESDIESVIYTIEAVAKGDWGIEKLGDTPRKKVRTSSSGKGSILDAKPPKKKVKSREKKMSKEKSSDTTKESRPPDFISISASKNISGETPEGIKAEPLTPMEDALPPSLSGQAKPEDSDCHRKIETCGSRKSERSCKGALYKTLVSEGMLTSLRANVDRGKRSSGKGNSSDHEGCWNEESWTFSQSGTSGSKKFKKTKPKEDCLLGSAKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGNVSSEPTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGDKWSNKQLFLDAIHPTEAIFSEDRNTMEPVHKVKNIPSIFNTPEPTTTQEPLVGSQKRKARKTKITHLVRTADGRVSPAGGTLDDKPKEQLQRSLPKATETDCNDKCSHNTEVGETRSSTPEMPAVSAFFSLAALAEVAAMENVHRGQRSTPLTHDGQPKEMPQAPVLISCADQ", "length": 941 }, "evidence": [ { "id": "I3L6T8", "url": "https://omabrowser.org/oma/group/I3L6T8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "pmid": "" }, { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3L6T8", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 254, "end_pos": 256, "annotation": "n_glycosylation_sequon" }, { "start_pos": 622, "end_pos": 624, "annotation": "n_glycosylation_sequon" }, { "start_pos": 767, "end_pos": 769, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L6T8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 916, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L6T8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L6T8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L6T8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6T8" }, { "id": "PS50118", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50118" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "HMG box", "eco_id": "ECO_0000259", "start_pos": 80, "end_pos": 148, "start_aa": "Ala", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 254, "end_pos": 256 }, { "start_pos": 622, "end_pos": 624 }, { "start_pos": 767, "end_pos": 769 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L6T9-1", "uniprot_ac": "I3L6T9", "uniprot_id": "I3L6T9_PIG", "mass": { "chemical_mass": 71899.0, "monoisotopic_mass": 71899.0 }, "refseq": { "ac": "XP_013853146", "name": "uncharacterized protein C12orf56 homolog", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013853146" }, "gene_names": [ { "name": "C12orf56", "type": "recommended", "evidence": [ { "id": "I3L6T9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6T9" } ] }, { "name": "C5H12orf56", "type": "recommended", "evidence": [ { "id": "I3L6T9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6T9" } ] }, { "name": "C12orf56", "type": "synonym", "evidence": [ { "id": "I3L6T9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6T9" } ] }, { "name": "C5H12orf56", "type": "synonym", "evidence": [ { "id": "XP_013853146", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013853146" } ] } ], "protein_names": [ { "name": "Chromosome 5 C12orf56 homolog", "type": "synonym", "evidence": [ { "id": "I3L6T9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6T9/entry#names_and_taxonomy" } ] }, { "name": "uncharacterized protein C12orf56 homolog", "type": "synonym", "evidence": [ { "id": "XP_013853146", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013853146" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L6T9", "url": "https://www.uniprot.org/uniprotkb/I3L6T9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C12orf56", "url": "https://www.uniprot.org/uniprotkb/I3L6T9", "locus": { "chromosome": "5", "start_pos": 28716358, "end_pos": 28817810, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000000464", "url": "https://www.ensembl.org/id/ENSSSCG00000000464" } ] } } ], "crossref": [ { "id": "ENSSSCG00000000464", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000000464", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100737998", "url": "https://www.ncbi.nlm.nih.gov/gene/100737998", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR027878", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027878", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737998", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737998", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "LFWRSSE", "url": "https://omabrowser.org/oma/group/LFWRSSE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR35354", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35354", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR35354:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR35354:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15087", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15087", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013853146", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013853146", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2RCW0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCW0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCW0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCW0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6T9", "url": "https://www.uniprot.org/uniprotkb/I3L6T9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6T9-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASPTPSGFPARTNSRLDAFLRRRLPPEVYDAIRAYEPCIVASDSEKHTLKYVVLSDRLIYLTENPPKSIRRVVALRDVVAIDLIDDYPEFLTPPNRETNQHIRIIYYSTLLKNECEKSKGVRKFLFPFHHTNANNKKVKEENNDPVFWKGKKLESLNESLFRYHQEGSTPSKDFTLCPPSDLKKLSLHSQSACGPLPTPSRRSCQSASATGKAVSVPFGTTNTKEPQGLSDHKDSLSEIPFKCNGNGNEFYLGNSSMASPLQSNPNLEKKESELHLYIISTTSSMFLHLKSSWNNYIIKATLLQDPLYVSELSLATGSQRPYRSEEKIKHFGQLKSELFLKDNTLRKILCLTTELKGAAQKNFILKRLFWKTSDLFYFLVNKLHEYLPESRDKNALQNKSQRADELLACIEIIQTLGLMFRETETESSRLNTLAAKKGTLFNLVVILISEPQIPKSCPVFDIQLVADSTLVEMSFDAELQKLVLEYTDTATALLYEILLVFQQGNLGSGSTNFAISWMMSFLQSRPPTITFVASVVKEVVKGLSASFQLLRPSQAVLLYQRLYILKSCLQYSKTLAEYIRNDYREEFRYFIHMPALEKRLPLCYPITQPTTQLFHEVLKLVEQKQYLKC", "length": 630, "header": "tr|I3L6T9-1|I3L6T9_PIG Isoform 1 of Chromosome 5 C12orf56 homolog OS=Sus scrofa OX=9823 GN=C12orf56 PE=4 SV=2 CANONICAL=I3L6T9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RCW0-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T9/entry#A0A5G2RCW0-1", "sequence": { "sequence": "MASPTPSGFPARTNSRLDAFLRRRLPPEVYDAIRAYEPCIVASDSEKHTLKYVVLSDRLIYLTENPPKSIRRVVALRDVVAIDLIDDYPEFLTPPNRETNQHIRIIYYSTLLKNECEKSKGVRKFLFPFHHTNANNKKVKEENNDPVFWKGKKLESLNESLFRSEEKIKHFGQLKSELFLKDNTLRKILCLTTELKGAAQKNFILKRLFWKTSDLFYFLVNKLHEYLPESRDKNALQNKSQRADELLACIEIIQTLGLMFRETETESSRLNTLAAKKGTLFNLVVILISEPQIPKSCPVFDIQLVADSTLVEMSFDAELQKLVLEYTDTATALLYEILLVFQQGNLGSGSTNFAISWMMSFLQSRPPTITFVASVVKEVVKGLSASFQLLRPSQAVLLYQRLYILKSCLQYSKTLAEYIRNDYREEFRYFIHMPALEKRLPLCYPITQPTTQLFHEVLKLVEQKQYLKC", "length": 469, "header": "tr|A0A5G2RCW0-1|A0A5G2RCW0_PIG Computationally mapped isoform of Chromosome 5 C12orf56 homolog OS=Sus scrofa OX=9823 GN=C5H12orf56 PE=4 SV=1 CANONICAL=I3L6T9-1" }, "locus": { "chromosome": "5", "start_pos": 28817759, "end_pos": 28716468, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080086.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080086.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074276.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074276.1" } ] } }, { "isoform_ac": "I3L6T9-1", "url": "https://www.uniprot.org/uniprotkb/I3L6T9/entry#I3L6T9-1", "sequence": { "sequence": "MASPTPSGFPARTNSRLDAFLRRRLPPEVYDAIRAYEPCIVASDSEKHTLKYVVLSDRLIYLTENPPKSIRRVVALRDVVAIDLIDDYPEFLTPPNRETNQHIRIIYYSTLLKNECEKSKGVRKFLFPFHHTNANNKKVKEENNDPVFWKGKKLESLNESLFRYHQEGSTPSKDFTLCPPSDLKKLSLHSQSACGPLPTPSRRSCQSASATGKAVSVPFGTTNTKEPQGLSDHKDSLSEIPFKCNGNGNEFYLGNSSMASPLQSNPNLEKKESELHLYIISTTSSMFLHLKSSWNNYIIKATLLQDPLYVSELSLATGSQRPYRSEEKIKHFGQLKSELFLKDNTLRKILCLTTELKGAAQKNFILKRLFWKTSDLFYFLVNKLHEYLPESRDKNALQNKSQRADELLACIEIIQTLGLMFRETETESSRLNTLAAKKGTLFNLVVILISEPQIPKSCPVFDIQLVADSTLVEMSFDAELQKLVLEYTDTATALLYEILLVFQQGNLGSGSTNFAISWMMSFLQSRPPTITFVASVVKEVVKGLSASFQLLRPSQAVLLYQRLYILKSCLQYSKTLAEYIRNDYREEFRYFIHMPALEKRLPLCYPITQPTTQLFHEVLKLVEQKQYLKC", "length": 630, "header": "tr|I3L6T9-1|I3L6T9_PIG Isoform 1 of Chromosome 5 C12orf56 homolog OS=Sus scrofa OX=9823 GN=C12orf56 PE=4 SV=2 CANONICAL=I3L6T9-1" }, "locus": { "chromosome": "5", "start_pos": 28817759, "end_pos": 28716468, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030713.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030713.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019741.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019741.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 199, "start_aa": "Thr", "end_pos": 199, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr199", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": 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], "sequence": { "sequence": "MASPGKPGAGEAPEEEGEDEGQALGPLAAMLEQARELFLLCDKEAKGFVTRHDLQGLQSDLPLTPEQLEAVFESLDQAHTGFLTAREFCLGLGKFVGVELAQGAPPSQAPEETFEAGWSDAEGTGGSLEEEEEERVGSALEQLGVAQVLGKQPAIRTLWTRLQRERPELLGSFEDVLLHASACLEEAAREREGLEQALRRRESEHERELRCLYEEMEQQLREQRQRPQDLPREEQRGRLELELQSREQELERAGLRQRELEQQLQARAAEQLEAQAQNAQLWLTNEALRTQLQGAQEQLRRLEGDRQGRREQTQRDMVAVSRNMQKEKLSLLRQLELLRQLNTRLRDERDVCEAKRLGSSHRKALTTAPLPGPPCCCCCCCCSSWARPPRRGSGHLPSAR", "length": 400, "header": "tr|I3L6X5-1|I3L6X5_PIG Isoform 1 of Calcium release activated channel regulator 2B OS=Sus scrofa OX=9823 GN=CRACR2B PE=4 SV=1 CANONICAL=I3L6X5-1" }, "isoforms": [ { "isoform_ac": "I3L6X5-1", "url": "https://www.uniprot.org/uniprotkb/I3L6X5/entry#I3L6X5-1", "sequence": { "sequence": "MASPGKPGAGEAPEEEGEDEGQALGPLAAMLEQARELFLLCDKEAKGFVTRHDLQGLQSDLPLTPEQLEAVFESLDQAHTGFLTAREFCLGLGKFVGVELAQGAPPSQAPEETFEAGWSDAEGTGGSLEEEEEERVGSALEQLGVAQVLGKQPAIRTLWTRLQRERPELLGSFEDVLLHASACLEEAAREREGLEQALRRRESEHERELRCLYEEMEQQLREQRQRPQDLPREEQRGRLELELQSREQELERAGLRQRELEQQLQARAAEQLEAQAQNAQLWLTNEALRTQLQGAQEQLRRLEGDRQGRREQTQRDMVAVSRNMQKEKLSLLRQLELLRQLNTRLRDERDVCEAKRLGSSHRKALTTAPLPGPPCCCCCCCCSSWARPPRRGSGHLPSAR", "length": 400, "header": "tr|I3L6X5-1|I3L6X5_PIG Isoform 1 of Calcium release activated channel regulator 2B OS=Sus scrofa OX=9823 GN=CRACR2B PE=4 SV=1 CANONICAL=I3L6X5-1" }, "locus": { "chromosome": "2", "start_pos": 523844, "end_pos": 520990, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032266.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032266.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019777.1", "url": "https://www.ensembl.org/id/ENSSSCP00000019777.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6X5", "url": "https://www.uniprot.org/uniprotkb/I3L6X5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A061ICI5-1", "protein_name": "EF-hand calcium-binding domain-containing protein 4A isoform X1", "gene_name": "Cracr2b", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASPGQPGPGEGQEEEETKGISAGHRPEVLQQAQELFLLCDKDAKGFITRQDLQGLQSDLPLTPEQLEAVFESLDQAHTGFLTAREFCLGLGKFVGVESAQGGSSLRTPEETFESSTGGSLEEDDDVETFCTSLEKLGVARVLGEQWAVRTLWVRLQRERPELLGALEEVLMRASACLEAAARERDGLEQALRRRESEHEREVRGLYEELEQQLGEQRHRCQSQKLLPREEQRGHLELELQTREQELERAGLRQRELEQQLQARTAEQLEAQAQHTQLRRAYEVIRAQLDQAQEQLSRLEGEAQGRQEQTQRDVVAVSRNMQKEKLSLLRQLELLRELNLRLRDERDACETKLLGSSHRKALAIAHKPGPTYCCCCCGWARPPRRGSGHLPSAR", "length": 394 }, "evidence": [ { "id": "I3L6X5", "url": "https://omabrowser.org/oma/group/I3L6X5/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "B0BNK9-1", "protein_name": "EF-hand calcium-binding domain-containing protein 4A", "gene_name": "Cracr2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASPGPPGAGQGQEEEERAGVSAGHQAEVLQQAQELFVLCDKDAKGFITRQDLQGLQSDLPLTPEQLEAVFESLDQAHTGFLTAREFCLGLGKFVGVESVPGRAPLRTPEETFESGTGGSLEEEDDVETFYTSLEKLGVARVLGEQWAVRTLWVGLQRERPELLGSLEEILMRASACLEAAARERDGLEQALRRRESEHEREVRGLYEELEQQLREQRQRRQSQNPPREEERGHLELELQTREQELERAALRQRELEQQLQARAAEQLEVQAQHIQLQRAYEALRAQLDQAQEQLIRLEGEAQGRQEQTQRDVVAVSRNMQKEKLSLLRQLELLRELNLRLRDERDACETKLLGSSHRKALAIAHKPGPIYCCCCCGWARPPRRGSGHLPSAR", "length": 393 }, "evidence": [ { "id": "I3L6X5", "url": "https://omabrowser.org/oma/group/I3L6X5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80ZJ8-1", "protein_name": "EF-hand calcium-binding domain-containing protein 4A", "gene_name": "Cracr2b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASPGLPGSGEGQEGEETTGVSARHGVEVLQQAQELFLLCDKDAKGFITRQDLQGLQSDLPLTPEQLEAVFESLDQAHTGFLTAREFCLGLGKFVGVESAPGGSPLRTSEETFESGTGGSLEEEEEDVETFYTSLEKLGVARVLGEQWAVRTLWVGLQRERPELLGSLEEVLMRASACLEAAAREREGLEQALRRRESEHEREVRGLYEELEQQLGEQRHRRQSQNLPREEQRGHLELELQTREQELERAGLRQRELEQQLQARAAEQLEAQAQHIQLQRAYEAIRAQLDQAQEQLSRLEGEAQGRQEQTQRDVVAVSRNMQKEKLSLLRQLELLRELNLRLRDERDACETKLLGSSHRKALAIAHKPGPIYCCCCCGWARPPRRGSGHLPSAR", "length": 394 }, "evidence": [ { "id": "I3L6X5", "url": "https://omabrowser.org/oma/group/I3L6X5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8N4Y2-1", "protein_name": "EF-hand calcium-binding domain-containing protein 4A", "gene_name": "CRACR2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASPGKPGADEAQEEEGELEGGSAGPRAAILEQAEELFLLCDKEAKGFITKHDLQGLQSDLPLTPEQLEAVFESLDRAHTGFLTAREFCLGLGMFVGVASAQGANPCRTPEETFESGGLDVQGTAGSLDEEEEEEERFHTVLEQLGVAPVLGKQRAVRTLWARLQRERPELLGSFEDVLIRASACLEEAARERDGLEQALRRRESEHEREVRALYEETEQLREQSRRPPSQNFARGERRSRLELELQSREQDLERAGLRQRELEQQLHAQAAEHLEAQAQNSQLWRAHEALRTQLEGAQEQIRRLESEARGRQEQTQRDVVAVSRNMQKEKVSLLRQLELLRELNTRLRDDRDACEARRAGSSCRKALTTARLPGPTCCCCCCWARPPRRGSGHLPSAR", "length": 399 }, "evidence": [ { "id": "I3L6X5", "url": "https://omabrowser.org/oma/group/I3L6X5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "I3L6X5", "url": "https://www.uniprot.org/uniprotkb/I3L6X5" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "store-operated calcium entry", "id": "GO:0002115", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002115", "evidence": [ { "database": "UniProtKB", "id": "I3L6X5", "url": "https://www.uniprot.org/uniprotkb/I3L6X5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L6X5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 400, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L6X5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L6X5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L6X5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6X5" }, { "id": "PS50222", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50222" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "EF-hand", "eco_id": "ECO_0000259", "start_pos": 63, "end_pos": 98, "start_aa": "Leu", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L6Y2-1", "uniprot_ac": "I3L6Y2", "uniprot_id": "I3L6Y2_PIG", "mass": { "chemical_mass": 43270.0, "monoisotopic_mass": 43270.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Testis expressed 13A", "type": "synonym", "evidence": [ { "id": "I3L6Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L6Y2", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2", "locus": {} } ], "crossref": [ { "id": "I3L6Y2", "url": "https://alphafold.ebi.ac.uk/entry/I3L6Y2", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000012544", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000012544", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR001876", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001876", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR028193", "url": "https://www.ebi.ac.uk/interpro/entry/IPR028193", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036443", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036443", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR23111", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23111", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23111:SF64", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23111:SF64", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00641", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00641", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15186", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15186", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L6Y2", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6Y2-1", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MALNPEDSSGGFQHHMVVAFINEKMARHAKGPEFYLDNIILSWEEVEDKLRAILETSEVPSEAKEACAWGSLALCVRFARREDQLYRRSVQWLHDFAGLHKSATQALASDLKLLTAQLEMERKEAAFRLQLAHTSLAEVQKERDLLRWKLLQAELRAQPEPVAEGPGLATAAGTGTEGAGEEREEASIAATTATAFGAAGGGGSHKDAERAETEELSEDLNFMQLLGAVDQKDYTSGRQREGDLRSKETAMFYFSETLKPEPTISPEPLTVQLPASFTYSYPCPLFPFSEASTPSPPASSPPTATFTAAAPSPNWEPFDVSMWSDMGAQGLEPQEPQRDRRDSDPHQQRRPPVFRRPGDWDCPWCKAVNFSRREVCFRCGRGIWLQTPQ", "length": 389, "header": "tr|I3L6Y2-1|I3L6Y2_PIG Isoform 1 of Testis expressed 13A OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=I3L6Y2-1" }, "isoforms": [ { "isoform_ac": "I3L6Y2-1", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2/entry#I3L6Y2-1", "sequence": { "sequence": "MALNPEDSSGGFQHHMVVAFINEKMARHAKGPEFYLDNIILSWEEVEDKLRAILETSEVPSEAKEACAWGSLALCVRFARREDQLYRRSVQWLHDFAGLHKSATQALASDLKLLTAQLEMERKEAAFRLQLAHTSLAEVQKERDLLRWKLLQAELRAQPEPVAEGPGLATAAGTGTEGAGEEREEASIAATTATAFGAAGGGGSHKDAERAETEELSEDLNFMQLLGAVDQKDYTSGRQREGDLRSKETAMFYFSETLKPEPTISPEPLTVQLPASFTYSYPCPLFPFSEASTPSPPASSPPTATFTAAAPSPNWEPFDVSMWSDMGAQGLEPQEPQRDRRDSDPHQQRRPPVFRRPGDWDCPWCKAVNFSRREVCFRCGRGIWLQTPQ", "length": 389, "header": "tr|I3L6Y2-1|I3L6Y2_PIG Isoform 1 of Testis expressed 13A OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=I3L6Y2-1" }, "locus": { "chromosome": "X", "start_pos": 85956422, "end_pos": 85955168, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022920.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022920.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019784.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019784.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 293, "start_aa": "Thr", "end_pos": 293, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr293", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6Y2", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "I3L6Y2", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L6Y2", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 369, "end_pos": 371, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L6Y2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 389, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L6Y2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L6Y2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L6Y2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6Y2" }, { "id": "PS50199", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50199" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RanBP2-type", "eco_id": "ECO_0000259", "start_pos": 356, "end_pos": 380, "start_aa": "Arg", "end_aa": "Gly", 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Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6Z9", "url": "https://www.uniprot.org/uniprotkb/I3L6Z9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JV35-1", "protein_name": "N-alpha-acetyltransferase 80", "gene_name": "Naa80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELILSTSPAKLTLDPACQPELTLRFNLTKLTLDPARQSELSLSPRLAELTLDSTCHPEMSLSPGPAELTGDPQHQAKESLVPKLAELTLEPVHCRPELMSACADLINDQWPRSRASRLHSLGQSSDAFPLCLMLLSPQPTPGAAPIVVGHARLSRVLDHPHSLLVETVVVARALRGRGFGRRLMEGLEAFARARGFQRLHLTTHDQLYFYAHLGYQLGEPVQGLAFTNRRLPTNVLRAFSKPPCPQPPCKAPVLAAQAIPRSSKGPPLPPPPPLPLTTSPPPSPEPLPQSPLETRYRDLKGCPIFWMEKDI", "length": 312 }, "evidence": [ { "id": "I3L6Z9", "url": "https://omabrowser.org/oma/group/I3L6Z9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3H8C6-1", "protein_name": "N-alpha-acetyltransferase 80", "gene_name": "Naa80", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEVILSTSPAKLTLDPACQPELTLRFNLTKLTLDPALQPELSLSPRIAELTLDSTCHPEMTLSPGPAEFTLDPEHQAEETPAPNPAELTLEPVHCRPELLGACADLINDQWPRSRASRLHSLGQSSDAFPLCLMLLSPHPTPGASPIVVGHARLSRVLDQPHSLLVETVVVARALRGRGFGRRLMEGLEAFAQARGFRRLHLTTHDQLYFYAHLGYHLGEPVQGLVFSNRRLPNTLLRSFSKTRSPQQPCKGSVLAAQAVPRRSKGPQLPPPPPPLPQSLTTSPPPSPGPPPQSLLETRHRDLKGCPIFWMEKDI", "length": 315 }, "evidence": [ { "id": "I3L6Z9", "url": "https://omabrowser.org/oma/group/I3L6Z9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q93015-1", "protein_name": "N-alpha-acetyltransferase 80", "gene_name": "NAA80", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MELILSTSPAELTLDPACQPKLPLDSTCQPEMTFNPGPTELTLDPEHQPEETPAPSLAELTLEPVHRRPELLDACADLINDQWPRSRTSRLHSLGQSSDAFPLCLMLLSPHPTLEAAPVVVGHARLSRVLNQPQSLLVETVVVARALRGRGFGRRLMEGLEVFARARGFRKLHLTTHDQVHFYTHLGYQLGEPVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQNVRGRPIFWMEKDI", "length": 286 }, "evidence": [ { "id": "I3L6Z9", "url": "https://omabrowser.org/oma/group/I3L6Z9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9R123-1", "protein_name": "N-alpha-acetyltransferase 80", "gene_name": "Naa80", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MELILSTSPAKLTLDPARQPELTLRFNLSKLTLDPARQPELSLSPRLAELTLDPTCHPEMSLSPGPAELTLDPQHQAKELPVPKLPELILEPVHCRPELMSACADLINDQWPRSRASRLHSLGQSSDAFPLCLMLLSPQPTPGAAPVVVGHARLSRVLDQPHSLLVETVVVARPLRGRGFGRRLMEGLEAFARARGFRRLHLTTHDQLYFYAHLGYQLGEPVQGLAFTNRRLSTTVLRAFSKPPCPQPPCKEPILAAQAVPRSSKGPPLPPPPPLPQSLTASPPPSPEPLPQSPLETCYRDLKGCPIFWMEKDI", "length": 314 }, "evidence": [ { "id": "I3L6Z9", "url": "https://omabrowser.org/oma/group/I3L6Z9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of actin polymerization or depolymerization", "id": "GO:0008064", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008064", "evidence": [ { "database": "UniProtKB", "id": "I3L6Z9", "url": "https://www.uniprot.org/uniprotkb/I3L6Z9" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3L6Z9", "url": "https://www.uniprot.org/uniprotkb/I3L6Z9" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3L6Z9", "url": "https://www.uniprot.org/uniprotkb/I3L6Z9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "protein-N-terminal amino-acid acetyltransferase activity", "id": "GO:0004596", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004596", "evidence": [ { "database": "UniProtKB", "id": "I3L6Z9", "url": "https://www.uniprot.org/uniprotkb/I3L6Z9" } ], "pmid": "" }, { "name": "acetyl-CoA binding", "id": "GO:1905502", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1905502", "evidence": [ { "database": "UniProtKB", "id": "I3L6Z9", "url": "https://www.uniprot.org/uniprotkb/I3L6Z9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "57324", "name": "", "equation": "N-terminal L-glutamyl-L-glutamyl-L-glutamyl-[protein] + acetyl-CoA = N-terminal N-acetyl-L-glutamyl-L-glutamyl-L-glutamyl-[protein] + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "57324", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/57324" } ] }, { "id": "57328", "name": "", "equation": "N-terminal L-aspartyl-L-aspartyl-L-aspartyl-[protein] + acetyl-CoA = N-terminal N-acetyl-L-aspartyl-L-aspartyl-L-aspartyl-[protein] + CoA + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "57328", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/57328" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L6Z9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 288, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L6Z9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L6Z9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L6Z9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L6Z9" }, { "id": "PS51186", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51186" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "N-acetyltransferase", "eco_id": "ECO_0000259", "start_pos": 64, "end_pos": 209, "start_aa": "Met", "end_aa": "Thr", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L703-1", "uniprot_ac": "I3L703", "uniprot_id": "I3L703_PIG", "mass": { "chemical_mass": 52681.0, "monoisotopic_mass": 52681.0 }, "refseq": {}, "gene_names": [ { "name": "FAM114A2", "type": "recommended", "evidence": [ { "id": "I3L703", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L703" } ] } ], "protein_names": [ { "name": "Family with sequence similarity 114 member A2", "type": "synonym", "evidence": [ { "id": "I3L703", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L703/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L703", "url": "https://www.uniprot.org/uniprotkb/I3L703" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "FAM114A2", "url": "https://www.uniprot.org/uniprotkb/I3L703", "locus": { "chromosome": "16", "start_pos": 69159387, "end_pos": 69121537, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017073", "url": "https://www.ensembl.org/id/ENSSSCG00000017073" } ] } } ], "crossref": [ { "id": "I3L703", "url": "https://alphafold.ebi.ac.uk/entry/I3L703", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000017073", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017073", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511051", "url": "https://www.ncbi.nlm.nih.gov/gene/100511051", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007998", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007998", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511051", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511051", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NTFFAEM", "url": "https://omabrowser.org/oma/group/NTFFAEM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1RQC1", "url": "https://www.orthodb.org/?gene=F1RQC1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12842", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12842", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12842:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12842:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05334", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05334", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2R5G9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5G9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R5G9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R5G9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RQC1", "url": "https://www.uniprot.org/uniprotkb/F1RQC1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RQC1-1", "url": "https://www.uniprot.org/uniprotkb/F1RQC1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L703", "url": "https://www.uniprot.org/uniprotkb/I3L703", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L703-1", "url": "https://www.uniprot.org/uniprotkb/I3L703-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSDKDDIETPVVTEAAPILEDENCEPAKNSGSLDLSAKPESKSEPVVSTRKRPEFKHSSDLETSEVLPVQASEAAGKEAVSKDVPQTGWGYWGSWGKSLLSSASATVATVGQGISNVIERAETSLGIPSPSDISTEVQYAAGETNAKESENSSPVSGPFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRTSTLSQVLREVKEKEELWTSNEVTIETDKKTHYGLLFDEFQGLSHLEALEMLSRESEIKVKSILNSLSGEELETLKLELEQLKEAFSLAEFCEEEEEETKGDEDFTKEITELFSQLHVSSKPEKLARARNTAYEWISTSLAKPLEKKEEGEKQLEAEEAEQISNSSIEDIHAFAIRSLAELTACSIELFHKIAALVLHGRKQEVSAIERSRALSQMTVLLCKELSSLSKEFTTCLTTAGASNSASYIQDAFQLLLPVLEISLIENKTELPEA", "length": 483, "header": "tr|I3L703-1|I3L703_PIG Isoform 1 of Family with sequence similarity 114 member A2 OS=Sus scrofa OX=9823 GN=FAM114A2 PE=1 SV=2 CANONICAL=I3L703-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R5G9-1", "url": "https://www.uniprot.org/uniprotkb/I3L703/entry#A0A5G2R5G9-1", "sequence": { "sequence": "MSDKDDIETPVVTEAAPILEDENCEPAKNSGSLDLSAKPESKSEPVVSTRKRPEFKHSSDLETSEVLPVQASEAAGKEAVSKDVPQTGWGYWGSWGKSLLSSASATVATVGQGISNVIERAETSLGIPSPSDISTEVQYAAGETNAKESENSSPVSGPFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRTSTLSQVLREVKEKEELWTSNEVTIETDKKTHYGLLFDEFQGLSHLEALEMLSRESEIKVKSILNSLSGEELETLKLELEQLKEAFSLAEFCEEEEEETKGDEDFTKEITELFSQLHVSSKPEKLARARNTAYEWISTSLAKPLEKKEEGEKQLEAEEAEQISNSSIEDIHAFAIRSLAELTACSIELFHKIAALVLHGRKQEVSAIERSRALSQMTVLLCKELSSLSKEFTTCLTTAGQSQILDPLSEARD", "length": 463, "header": "tr|A0A5G2R5G9-1|A0A5G2R5G9_PIG Computationally mapped isoform of Family with sequence similarity 114 member A2 OS=Sus scrofa OX=9823 GN=FAM114A2 PE=1 SV=1 CANONICAL=I3L703-1" }, "locus": { "chromosome": "16", "start_pos": 69152125, "end_pos": 69125290, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082987.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082987.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065825.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065825.1" } ] } }, { "isoform_ac": "F1RQC1-1", "url": "https://www.uniprot.org/uniprotkb/I3L703/entry#F1RQC1-1", "sequence": { "sequence": "MSDKDDIETPVVTEAAPILEDENCEPAKNSGSLDLSAKPESKSEPVVSTRKRPEFKHSSDLETSEVLPVQASEAAGKEAVSKDVPQTGWGYWGSWGKSLLSSASATVATVGQGISNVIERAETSLGIPSPSDISTEVQYAAGETNAKESENSSPVSGPFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRTSTLSQVLREVKEKEELWTSNEVTIETDKKTHYGLLFDEFQGLSHLEALEMLSRESEIKVKSILNSLSGEELETLKLELEQLKEAFSLAEFCEEEEEETKGDEDFTKEITELFSQLHVSSKPEKLARARNTAYEWISTSLAKPLEKKEEGEKQLEAEEAEQISNSSIEDIHAFAIRSLAELTACSIELFHKIAALVLHGRKQEVSAIERSRALSQMTVLLCKELSSLSKEFTTCLTTAGVKEKADVLNPLITAVF", "length": 466, "header": "tr|F1RQC1-1|F1RQC1_PIG Computationally mapped isoform of Family with sequence similarity 114 member A2 OS=Sus scrofa OX=9823 GN=FAM114A2 PE=1 SV=3 CANONICAL=I3L703-1" }, "locus": { "chromosome": "16", "start_pos": 69155677, "end_pos": 69125290, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000018589.5", "url": "https://www.ensembl.org/id/ENSSSCT00000018589.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000018089.3", "url": "https://www.ensembl.org/id/ENSSSCP00000018089.3" } ] } }, { "isoform_ac": "I3L703-1", "url": "https://www.uniprot.org/uniprotkb/I3L703/entry#I3L703-1", "sequence": { "sequence": "MSDKDDIETPVVTEAAPILEDENCEPAKNSGSLDLSAKPESKSEPVVSTRKRPEFKHSSDLETSEVLPVQASEAAGKEAVSKDVPQTGWGYWGSWGKSLLSSASATVATVGQGISNVIERAETSLGIPSPSDISTEVQYAAGETNAKESENSSPVSGPFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRTSTLSQVLREVKEKEELWTSNEVTIETDKKTHYGLLFDEFQGLSHLEALEMLSRESEIKVKSILNSLSGEELETLKLELEQLKEAFSLAEFCEEEEEETKGDEDFTKEITELFSQLHVSSKPEKLARARNTAYEWISTSLAKPLEKKEEGEKQLEAEEAEQISNSSIEDIHAFAIRSLAELTACSIELFHKIAALVLHGRKQEVSAIERSRALSQMTVLLCKELSSLSKEFTTCLTTAGASNSASYIQDAFQLLLPVLEISLIENKTELPEA", "length": 483, "header": "tr|I3L703-1|I3L703_PIG Isoform 1 of Family with sequence similarity 114 member A2 OS=Sus scrofa OX=9823 GN=FAM114A2 PE=1 SV=2 CANONICAL=I3L703-1" }, "locus": { "chromosome": "16", "start_pos": 69158136, "end_pos": 69125290, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032210.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032210.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019806.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019806.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L703", "url": "https://www.uniprot.org/uniprotkb/I3L703" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511051", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511051", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M6YX33-1", "protein_name": "Protein FAM114A2", "gene_name": "fam114a2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDNEDSSSDQTEKSVDQEPTAAAPPHRDETDGSDVAPTRKTRRRPEQKLPAEEQENPETQQTTTTTSASDASTETTVSQGGWGYWGSWGKSILSTATATVATVGQGLTQVIEKAESSLGIPSPEELKAQVEEEEKNDDSASSEADRDESEKTYGMGGAMGMISSSSMGMLSSLTTVVQSTSKTVISGGLDALEFIGKKTMDVIAEGDPGFKKTKGLMNRNSTLSQVLREAKECEEQQKAENATSEPNKKAHYGMLFDEFQGLSHLEALEILSRESEAKVKSVLTTLSGEELTKLREDLQNIKEPFSLMEFDDELEDDTKCDDGEDFVKELTDVLKGLQISTSADKLSKARKNAFNHITNMKLRSENIEKEKEDKEEGEGEKEERQKEKNTETAETEYTVEDAHLSAITSLAEFTARSIEQFHKTAEMLLYSNTEGAAAPEQAKILSQVTIVICKEVSLLSKKFTSCLTTIGANEKGEVLNPLITSVFLEASNSASYIQDAFQLLLPVLEVSHIQRTVES", "length": 520 }, "evidence": [ { "id": "I3L703", "url": "https://omabrowser.org/oma/group/I3L703/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0YB38-1", "protein_name": "Family with sequence similarity 114 member A2", "gene_name": "FAM114A2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSEEDNGENLKGETSHEDENEQKVEELGSTESNEEREPVPVTRKRPEPKAPSQSAGTETPTAETSKVSEPPASQSGWGYWGSWGKSLLSTASATVATVGQGISNVIEKAETTLGIPSPSEISSETRDATRGSENPDANSADATGDGSSFPIAGAFGVLSTISTAVQSTGKSVITGGLDALEFIGKKTMDVIAEGDPGFKKTKGLMNRTSTLSQVLREAKEKEEQQTATEVTMTTEKKAHYGLLFDEFQGLSHLEALEMLSRECESKVKLVLNALSGEELETVKEEMEQLNEAFSLAEFFEEEEEEKKGDEEFTKEVTELFAELRISTKPDKLIMVRTSAHDWIAQFNSSLPKEEKESEENEEVEPGGGDHDVKKSVEDIHAFAIRSLAELTAYSIESFHRTAALFLHGQKQEVTATDRAKSLSQVTIVLCKELSSFSKEFTTCLTIAGVKEKADVLNPLITGVFLEASNSASYIQDAFQLLLPVLQLSLIEARTELSQQ", "length": 499 }, "evidence": [ { "id": "I3L703", "url": "https://omabrowser.org/oma/group/I3L703/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0LAK6-1", "protein_name": "Family with sequence similarity 114, member A2", "gene_name": "Fam114a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGDAAVMADKDATETPAVTEAASILKDENCEPVEKPENKCQPAVSTRKRPETRPSSDLEASELPAQQETASKDASQTGWGYWGSWGKSLLSSASATVATVGQGISNVIEKAETSLGIPSPTEISAEVKQAAGETSASENGSLLVSGPFGMLSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMIRNSTLSQVLREAKDKEEQWPSNEVTMETDKKTHYGLLFDEFQGLSHLEALEMLSRESEIKVKSILSSLSGEELQTTRLELEQLKEAFSLAEFCEEEEEERQGDEDFTKEITELIAQLHVSSRPEKLARARNTAYEWIRTSLAKPVAEKEEGEKQLEAENTEEAQKHSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGQKQEVTALERSQTLSQMTVMLCKDLASLSKEFTTCLTTAGVKEKADVLNPLITAVFLEASNSASYIQDAFQLLLPVLQISLIENKTESPDVSHQPRDL", "length": 499 }, "evidence": [ { "id": "I3L703", "url": "https://omabrowser.org/oma/group/I3L703/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8VE88-1", "protein_name": "Protein FAM114A2", "gene_name": "Fam114a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDKDPPESPVVTGVASTLKDENCEPVEKPEDKSQPVVSTRKRPETKPSSDLEASALPAQVSLAVAKETASKDVPQTGWGYWGSWGKSLLSSASATVATVGQGISNVIEKAETSLGIPSPTEISAEVKQAAGEKNAGENGSLLVAAPFGMLSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRTSTLSQVLREAKDKEEQRPSNEVTMETDKKTHYGLLFDEFQGLSHLEALEMLSRESEIKVKSILSSLSGEELQTTRLELEQLKEVFSLAEFCEEEEEERQGDDNFTKEITDLFAQLHVSSRPEKLARARNTAYKWIRTSLARPVAEKEEGEKESEAGNTEEAQKHSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGQKQEVTALERSQTLSQMTVMLCKDLASLSKEFTTCLTTAGVREKADVLNPVITAVFLEASNSASYIQDAFQLLLPVLQISLIESKTESSTCEPQSRDL", "length": 497 }, "evidence": [ { "id": "I3L703", "url": "https://omabrowser.org/oma/group/I3L703/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NRY5-1", "protein_name": "Protein FAM114A2", "gene_name": "FAM114A2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSDKDDIETPLLTEAAPILEDGNCEPAKNSESVDQGAKPESKSEPVVSTRKRPETKPSSDLETSKVLPIQDNVSKDVPQTRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGIPGPSEISTEVKYVAGETNAKENENSSPVAGAFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTMDVIAEGDPGFKRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDEFQGLSHLEALEMLSQESEIKVKSILNSLSGEELETLKVELEQLKETFSLAEFCEEEEEEKKGDEDFTKDITELFSQLHVSSKPEKLARARNTAHEWIRKSLTKPLAENEEGEKQSEAENTEQVNKNSIEDIHAFAIRSLAELTACSIELFHKTAALVLHGRKQEVTAIERSQTLSQMTIVLCKELSSLSKEFTTCLTTAGVKEMADVLNPLITAVFLEASNSASYIQDAFQLLLPVLEISLIENKIESHRHELQGQKPLLEH", "length": 505 }, "evidence": [ { "id": "I3L703", "url": "https://omabrowser.org/oma/group/I3L703/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VF39-1", "protein_name": "Protein FAM114A2", "gene_name": "Fam114A", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAKNPKKEEDGGNDWAQSDEDDNWDDWGDDDDKFVHVEKEQQPQEKVSSRNDAKGTAENQEKLETPRISAPATASATSSSWGLWGGKLSSVLTTATEGLGTITTQVNQGLNQIIGVPDPEELARINVAEKAEKAAKAPPEENVDDEKESSAAFGLDFVTNLGSKVLNTGLDTLEGIGKKTMTILQDNDPKLMNKRKLLGLEANSPNLSAVLLEAKKEADQMEQSLQQLQLKRQKAQLRFEILFENYCGLVHFEALEILSKESRLKLDTLLDAVSGNARAELQETINEVKELIELEDLDVESEGDYEAEELSERLAATIKDAELGIQFDDIANHWTQSLSWLTSEEATAADLEQAYAKSIHALSEACALEMCKLHKIAELLLVKPHHSTANEVDGVVNLCQQFNGHLQGLSHRFAAVLSGKSETEESKGRVSTFFSEMLSAVQFIEKAYKLFTPILQMGAV", "length": 460 }, "evidence": [ { "id": "I3L703", "url": "https://omabrowser.org/oma/group/I3L703/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 151, "end_pos": 153, "annotation": "n_glycosylation_sequon" }, { "start_pos": 210, "end_pos": 212, "annotation": "n_glycosylation_sequon" }, { "start_pos": 375, "end_pos": 377, "annotation": "n_glycosylation_sequon" }, { "start_pos": 476, "end_pos": 478, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L703-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 483, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L703-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L703" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 151, "end_pos": 153 }, { "start_pos": 210, "end_pos": 212 }, { "start_pos": 375, "end_pos": 377 }, { "start_pos": 476, "end_pos": 478 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L730-1", "uniprot_ac": "I3L730", "uniprot_id": "I3L730_PIG", "mass": { "chemical_mass": 44999.0, "monoisotopic_mass": 44999.0 }, "refseq": {}, "gene_names": [ { "name": "SPATA2L", "type": "recommended", "evidence": [ { "id": "I3L730", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L730" } ] } ], "protein_names": [ { "name": "Spermatogenesis associated 2 like", "type": "synonym", "evidence": [ { "id": "I3L730", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L730/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L730", "url": "https://www.uniprot.org/uniprotkb/I3L730" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SPATA2L", "url": "https://www.uniprot.org/uniprotkb/I3L730", "locus": { "chromosome": "6", "start_pos": 331740, "end_pos": 326746, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000029339", "url": "https://www.ensembl.org/id/ENSSSCG00000029339" } ] } } ], "crossref": [ { "id": "I3L730", "url": "https://alphafold.ebi.ac.uk/entry/I3L730", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000029339", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000029339", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR048839", "url": "https://www.ebi.ac.uk/interpro/entry/IPR048839", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR15326", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15326", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15326:SF7", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15326:SF7", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF21388", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21388", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2RGA2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGA2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RGA2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RGA2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L730", "url": "https://www.uniprot.org/uniprotkb/I3L730", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L730-1", "url": "https://www.uniprot.org/uniprotkb/I3L730-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGSSSLSEDYRLCLERELRRGRAGVCGDPSLRAVLWQILVEDFDLHGALQDDALALLTDGLWGRADLAPALRGLARAFELLELAAVHLYLLPWRKEFTTIKTFSGGYVHVLRGALSEDLLIQSFRKMGYVRRDAHRLMVAAPPPARQLVQVALGCFALRLECEILGEVLAQLGTSVLPAEVLLQARRASADVASCVAWLQQRLAREEEPPPLPPRGSPAVCRARLDLYRDLQEDEGSDEASLYGGPSPGPDSPAASELACRPLFWEQSAQLWVGGGAWGPVEASSPPYEASEEELESEPEAFSFLSLRRELLSQPGDLAAPQAPGSPERASPPRVHGPVPEPLGYQAHSCLAPGALPTLCCDTCRQLHAAHCPALPACRPGHVLHVLRGNSQRRLWLQRAQVDALLYEGPGAQP", "length": 414, "header": "tr|I3L730-1|I3L730_PIG Isoform 1 of Spermatogenesis associated 2 like OS=Sus scrofa OX=9823 GN=SPATA2L PE=3 SV=2 CANONICAL=I3L730-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RGA2-1", "url": "https://www.uniprot.org/uniprotkb/I3L730/entry#A0A5G2RGA2-1", "sequence": { "sequence": "MGSSSLSEDYRLCLERELRRGRAGVCGDPSLRAVLWQILVEDFDLHGALQDDALALLTDGLWGRADLAPALRGLARAFELLELAAVHLYLLPWRKEFTTIKTFSGGYVHVLRGALSEDLLIQSFRKMGYVRRDAHRLMLCDPSGLRQVHS", "length": 150, "header": "tr|A0A5G2RGA2-1|A0A5G2RGA2_PIG Computationally mapped isoform of Spermatogenesis associated 2 like OS=Sus scrofa OX=9823 GN=SPATA2L PE=3 SV=1 CANONICAL=I3L730-1" }, "locus": { "chromosome": "6", "start_pos": 331737, "end_pos": 328534, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083898.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083898.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070204.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070204.1" } ] } }, { "isoform_ac": "I3L730-1", "url": "https://www.uniprot.org/uniprotkb/I3L730/entry#I3L730-1", "sequence": { "sequence": "MGSSSLSEDYRLCLERELRRGRAGVCGDPSLRAVLWQILVEDFDLHGALQDDALALLTDGLWGRADLAPALRGLARAFELLELAAVHLYLLPWRKEFTTIKTFSGGYVHVLRGALSEDLLIQSFRKMGYVRRDAHRLMVAAPPPARQLVQVALGCFALRLECEILGEVLAQLGTSVLPAEVLLQARRASADVASCVAWLQQRLAREEEPPPLPPRGSPAVCRARLDLYRDLQEDEGSDEASLYGGPSPGPDSPAASELACRPLFWEQSAQLWVGGGAWGPVEASSPPYEASEEELESEPEAFSFLSLRRELLSQPGDLAAPQAPGSPERASPPRVHGPVPEPLGYQAHSCLAPGALPTLCCDTCRQLHAAHCPALPACRPGHVLHVLRGNSQRRLWLQRAQVDALLYEGPGAQP", "length": 414, "header": "tr|I3L730-1|I3L730_PIG Isoform 1 of Spermatogenesis associated 2 like OS=Sus scrofa OX=9823 GN=SPATA2L PE=3 SV=2 CANONICAL=I3L730-1" }, "locus": { "chromosome": "6", "start_pos": 331331, "end_pos": 328534, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027799.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027799.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019834.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019834.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L730", "url": "https://www.uniprot.org/uniprotkb/I3L730" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3L730", "url": "https://www.uniprot.org/uniprotkb/I3L730" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L730-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 414, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L730-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L730" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L730", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L730" }, { "id": "PF21388", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF21388" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Spermatogenesis-associated protein 2 PUB-like", "eco_id": "ECO_0000259", "start_pos": 70, "end_pos": 195, "start_aa": "Ala", "end_aa": "Cys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"evidence": [ { "id": "I3L736", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L736/entry#names_and_taxonomy" } ] }, { "name": "UPF0764 protein C16orf89 homolog isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003354677", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354677" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L736", "url": "https://www.uniprot.org/uniprotkb/I3L736" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "C16orf89", "url": "https://www.uniprot.org/uniprotkb/I3L736", "locus": { "chromosome": "3", "start_pos": 37365357, "end_pos": 37346532, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025072", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33539", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR33539:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR33539:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15882", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15882", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003354677", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003354677", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L736", "url": "https://www.uniprot.org/uniprotkb/I3L736", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L736-1", "url": "https://www.uniprot.org/uniprotkb/I3L736-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSPGLLLLLLLLAPPPLQPSLLPPLDTPGGKAAVTGLILSALERATSFLEKRLPEINLDGMVGFRVLEAQLQGVQEKWARDPQLQPLSLRVGELADKLAPLLHRSIFYLRLSDPEYLREFQPTIEPGFWKLPRAWTHTSDSMVYTSFEPQDSFSEEHSDLCLAQLLGTGADSSPPCRLSDFCRNLMTKPGCSGYCLSHQMLFFLSARMRGCTEGLFRQSRRYMNLFCANMMDVNRRAEAIGYTYPTRDVFMENIMFCGLGGFSDFYKLRWLEAILSWQKPQEGCFGRPAADGEELPKAIHHQQHSLRRVKRREKQFTDGCSSHNTAMAVAALGGFLYILAEHPPADRELQPSVPALLSDH", "length": 361, "header": "tr|I3L736-1|I3L736_PIG Isoform 1 of Chromosome 3 C16orf89 homolog OS=Sus scrofa OX=9823 GN=C16orf89 PE=4 SV=2 CANONICAL=I3L736-1" }, "isoforms": [ { "isoform_ac": "I3L736-1", "url": "https://www.uniprot.org/uniprotkb/I3L736/entry#I3L736-1", "sequence": { "sequence": "MSSPGLLLLLLLLAPPPLQPSLLPPLDTPGGKAAVTGLILSALERATSFLEKRLPEINLDGMVGFRVLEAQLQGVQEKWARDPQLQPLSLRVGELADKLAPLLHRSIFYLRLSDPEYLREFQPTIEPGFWKLPRAWTHTSDSMVYTSFEPQDSFSEEHSDLCLAQLLGTGADSSPPCRLSDFCRNLMTKPGCSGYCLSHQMLFFLSARMRGCTEGLFRQSRRYMNLFCANMMDVNRRAEAIGYTYPTRDVFMENIMFCGLGGFSDFYKLRWLEAILSWQKPQEGCFGRPAADGEELPKAIHHQQHSLRRVKRREKQFTDGCSSHNTAMAVAALGGFLYILAEHPPADRELQPSVPALLSDH", "length": 361, "header": "tr|I3L736-1|I3L736_PIG Isoform 1 of Chromosome 3 C16orf89 homolog OS=Sus scrofa OX=9823 GN=C16orf89 PE=4 SV=2 CANONICAL=I3L736-1" }, "locus": { "chromosome": "3", "start_pos": 37365154, "end_pos": 37346626, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031769.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031769.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019840.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019840.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L736", "url": "https://www.uniprot.org/uniprotkb/I3L736" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624690", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624690", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z8P7-1", "protein_name": "Chromosome 16 open reading frame 89", "gene_name": "C16orf89", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLYLPFLLLVTACEASCLKTEPDVRSSIIPVLEKVTVFMENRYQDINLDAVLGFRVLQGYLKGALEKWPLEHELLAQRAQVESMIKKLSSLLEKATHSLVQNDPEYFKEFAPILGPHFWIFPHSWNQTDPLMAYSSFGSTNCFTEKMRDACFTYLLGTWKENGKSCIVTSACRNTMTKPACSNYCLSHQLLYFIFADVKGCSDHLFLKTQDYKNMFCASMMKINLEIEHNGFNISSRDLFMENIMLCGMSGFSDFYKLRWLEKILTWQMPKEGCFGEPSKELEHSSAVEDQKQLLRRVKRREKMFADGCSSHHTAVAAGSLGGFLYYHCS", "length": 330 }, "evidence": [ { "id": "I3L736", "url": "https://omabrowser.org/oma/group/I3L736/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "D3ZFA0-1", "protein_name": "Similar to human chromosome 16 open reading frame 89", "gene_name": "C10h16orf89", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARISLLLLLLLSLPQQLSSLPWPDTAQGTMAGLILTALEKATLFLEDRLPKINLDGAVGFQVLEVQLRGVQEKWAHNPLLQPLSLRAGQLANTLFALLQNSIFYLKQSDPTYLREFQPSLQPGFWKLPHAWTRTNASLVYPWLEPLDSFSEESSDACLVQLLGTGTDSRQPCRLSDFCRTLMTKAGCSGYSLSHQLLFFLWARMQGCTEGLFLQSQHYIDIFCANMMDLNRRAEAMGYAYPTQDLFMENIMFCGMAGFSDFYKLHWLEAILNWQNPQVGCFGKPDTKGEPPEVPHRQGVLRRVRRREKLFEDGCSCHNTATAVAALGGFLYILAEYHPDNGEPTPPTRSPASNYQDGAASPDAQRIGRPLSISS", "length": 375 }, "evidence": [ { "id": "I3L736", "url": "https://omabrowser.org/oma/group/I3L736/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1N2J8-1", "protein_name": "Chromosome 25 C16orf89 homolog", "gene_name": "C25H16orf89", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSSPGLRLLLLLLAAPPLQPSWLPPPDTPEGKATITGFILSALDRATSFLKKRLPEINLDGVVGFRMLEVQLRGVQEKWALDSQLQPLSLRVGKLVEKLAPLLHDSIFYLNLSDPEYLRQFQLTIEPGFWKLPHAWTRTESSMVYPTFEQEDSFSEELSDLCLVQLLGTGTNSSQPCRLSNFCRSLMTRPGCSGYCLSHQLLFFLSARMRGCTKGLFRQSQRYMNVFCANMMDLNRRADAIGYAYPTRDIFMENIVFCGMSGFSDFYKLRWLQAILSWQKPQEGCFGEPAAEDEELPKAIQYQQHFLRRVKRREKQFADGCSSHNTAMAVAALGGFLYILAEYPPAEGKLRPPTMTPPNGH", "length": 361 }, "evidence": [ { "id": "I3L736", "url": "https://omabrowser.org/oma/group/I3L736/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3UST5-1", "protein_name": "UPF0764 protein C16orf89 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MARLGLLLLLLLALPPHFSSVSWPDTAQGTMANLILTALEKATLFLEDRLPTINLDGVVGFQVLEVQLRGVQEKWAHKPLLQPLSMRAGQMANTLSALLQKSIFYLKQSDPTYLREFQPSIQPGFWKLPNDWTRTNASLVYPWLEPLDSFSEESSDVCLVQLLGTGTDSSQPCRLSNFCRTLMTKAGCSGYSLSHQLLFFLWARMQGCTEGLFLQSQHYMDIFCANMMELNHRAEAVGYAYPTQDLFMENIMFCGMAGFSDFYKLRWLEAILSWQNPQVGCFGRPDTKGEPSEVPHQQGILRRVRRREKLFADGCSCHNTATAVAALGGFLYILAEYHPDNGDAHPEYYPNHGDPYSSSQSPASNYQDGAAGPDVQRTGRPLSVS", "length": 385 }, "evidence": [ { "id": "I3L736", "url": "https://omabrowser.org/oma/group/I3L736/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6UX73-1", "protein_name": "UPF0764 protein C16orf89", "gene_name": "C16orf89", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASLGLLLLLLLTALPPLWSSSLPGLDTAESKATIADLILSALERATVFLEQRLPEINLDGMVGVRVLEEQLKSVREKWAQEPLLQPLSLRVGMLGEKLEAAIQRSLHYLKLSDPKYLREFQLTLQPGFWKLPHAWIHTDASLVYPTFGPQDSFSEERSDVCLVQLLGTGTDSSEPCGLSDLCRSLMTKPGCSGYCLSHQLLFFLWARMRGCTQGPLQQSQDYINLFCANMMDLNRRAEAIGYAYPTRDIFMENIMFCGMGGFSDFYKLRWLEAILSWQKQQEGCFGEPDAEDEELSKAIQYQQHFSRRVKRREKQFPDSRSVAQAGVQWRNLGSLQPLPPGFKQFSCLILPSSWDYRSVPPYLANFYIFLVETGFHHVAHAGLELLISRDPPTSGSQSVGL", "length": 402 }, "evidence": [ { "id": "I3L736", "url": "https://omabrowser.org/oma/group/I3L736/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3L736", "url": "https://www.uniprot.org/uniprotkb/I3L736" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3L736", "url": "https://www.uniprot.org/uniprotkb/I3L736" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3L736", "url": "https://www.uniprot.org/uniprotkb/I3L736" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L762-1", "uniprot_ac": "I3L762", "uniprot_id": "I3L762_PIG", "mass": { "chemical_mass": 14747.0, "monoisotopic_mass": 14747.0 }, "refseq": { "ac": "XP_003355940", "name": "syncollin", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355940" }, "gene_names": [ { "name": "SYCN", "type": "recommended", "evidence": [ { "id": "I3L762", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L762" } ] }, { "name": "SYCN", "type": "synonym", "evidence": [ { "id": "XP_003355940", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355940" } ] } ], "protein_names": [ { "name": "Syncollin", "type": "recommended", "evidence": [ { "id": "I3L762", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L762/entry#names_and_taxonomy" } ] }, { "name": "syncollin", "type": "synonym", "evidence": [ { "id": "XP_003355940", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003355940" } ] } ], "function": [ { "annotation": "Functions in exocytosis in pancreatic acinar cells regulating the fusion of zymogen granules with each other. May have a pore-forming activity on membranes and regulate exocytosis in other exocrine tissues.", "evidence": [ { "database": "UniProtKB", "id": "I3L762", "url": "https://www.uniprot.org/uniprotkb/I3L762#function" }, { "database": "UniProtKB", "id": "ARBA00057037", "url": "https://www.uniprot.org/uniprotkb/ARBA00057037#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L762", "url": "https://www.uniprot.org/uniprotkb/I3L762" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SYCN", "url": "https://www.uniprot.org/uniprotkb/I3L762", "locus": { "chromosome": "6", "start_pos": 47931042, "end_pos": 47932708, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021959", "url": "https://www.ensembl.org/id/ENSSSCG00000021959" } ] } } ], 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"" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "I3L7A7", "url": "https://www.uniprot.org/uniprotkb/I3L7A7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein-lysine N-methyltransferase activity", "id": "GO:0016279", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016279", "evidence": [ { "database": "UniProtKB", "id": "I3L7A7", "url": "https://www.uniprot.org/uniprotkb/I3L7A7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "55544", "name": "", "equation": "L-lysyl-[citrate synthase] + S-adenosyl-L-methionine = N(6)-methyl-L-lysyl-[citrate synthase] + S-adenosyl-L-homocysteine + H(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], 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"MPPSSRTFFLLISPMEDSTPLKQEKENRELREEGQLWEEMLTTLSQDPEPGLSETPKLEQGMETRFQPRSSPSGSPQSGARTPMDDLAGPRASSPPSSSQEPSAIPSLSALARQDLMATWQSDKTTSVTSEYGTPHIDHLEQSSDKEKSISYQTSHSEGNTFQQSQQTKCHLYGWRDVSYNNSNQKELRFDIFQEEDSNSIHDLDQPESGASEVAPSMLEIAIQNAKAYLLKTSSKSGLNLYDHLSAMLTNVLDKRPENAVDIIENISQDAKMEHFSKKLDTLQNENEMLPTYEIAEKQKALFLQGNLEGADQELEDEIAEHSLPNVMESAFYFEQAGVGLGTDETYRIFLALKQLTDTHPIQKCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDAPEERDNGEHEADEDDEDELPRSFYKAPQAIPKEESRTGANKYAYFVCNEPGRPWVKLPAVTPAQIVIARKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYHFGEEEEEEEEIEGGRDSYEENPDFEGIQVIDLVESLSNWVHHIQHILPQGRCNWFNPIPKSEEEEEEDEEEKEEKGEEPDYIEQEVGPPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLRSNLWPGAYAFSNGKKFENLYIGWGHKYSPDSYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAAQEVAVNLTEENEETEEDEDEEDDYDQ", "length": 733, "header": "tr|I3L7G2-1|I3L7G2_PIG Isoform 1 of Radial spoke head component 4A OS=Sus scrofa OX=9823 GN=RSPH4A PE=4 SV=2 CANONICAL=I3L7G2-1" }, "isoforms": [ { "isoform_ac": "A0A8D1MWX8-1", "url": "https://www.uniprot.org/uniprotkb/I3L7G2/entry#A0A8D1MWX8-1", "sequence": { "sequence": "MEDSTPLKQEKENRELREEGQLWEEMLTTLSQDPEPGLSETPKLEQGMETRFQPRSSPSGSPQSGARTPMDDLAGPRASSPPSSSQEPSAIPSLSALARQDLMATWQSDKTTSVTSEYGTPHIDHLEQSSDKEKSISYQTSHSEGNTFQQSQQTKCHLYGWRDVSYNNSNQKELRFDIFQEEDSNSIHDLDQPESGASEVAPSMLEIAIQNAKAYLLKTSSKSGLNLYDHLSAMLTNVLDKRPENAVDIIENISQDAKMEHFSKKLDTLQNENEMLPTYEIAEKQKALFLQGNLEGADQELEDEIGRCNWFNPIPKSEEEEEEDEEEKEEKGEEPDYIEQEVGPPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLRSNLWPGAYAFSNGKKFENLYIGWGHKYSPDSYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAAQEVAVNLTEENEETEEDEDEEDDYDQ", "length": 473, "header": "tr|A0A8D1MWX8-1|A0A8D1MWX8_PIG Computationally mapped isoform of Radial spoke head component 4A OS=Sus scrofa OX=9823 GN=RSPH4A PE=4 SV=1 CANONICAL=I3L7G2-1" }, "locus": { "chromosome": "1", "start_pos": 44985036, "end_pos": 44964566, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031991.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031991.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022468.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022468.3" } ] } }, { "isoform_ac": "I3L7G2-1", "url": "https://www.uniprot.org/uniprotkb/I3L7G2/entry#I3L7G2-1", "sequence": { "sequence": "MPPSSRTFFLLISPMEDSTPLKQEKENRELREEGQLWEEMLTTLSQDPEPGLSETPKLEQGMETRFQPRSSPSGSPQSGARTPMDDLAGPRASSPPSSSQEPSAIPSLSALARQDLMATWQSDKTTSVTSEYGTPHIDHLEQSSDKEKSISYQTSHSEGNTFQQSQQTKCHLYGWRDVSYNNSNQKELRFDIFQEEDSNSIHDLDQPESGASEVAPSMLEIAIQNAKAYLLKTSSKSGLNLYDHLSAMLTNVLDKRPENAVDIIENISQDAKMEHFSKKLDTLQNENEMLPTYEIAEKQKALFLQGNLEGADQELEDEIAEHSLPNVMESAFYFEQAGVGLGTDETYRIFLALKQLTDTHPIQKCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDAPEERDNGEHEADEDDEDELPRSFYKAPQAIPKEESRTGANKYAYFVCNEPGRPWVKLPAVTPAQIVIARKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYHFGEEEEEEEEIEGGRDSYEENPDFEGIQVIDLVESLSNWVHHIQHILPQGRCNWFNPIPKSEEEEEEDEEEKEEKGEEPDYIEQEVGPPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLRSNLWPGAYAFSNGKKFENLYIGWGHKYSPDSYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAAQEVAVNLTEENEETEEDEDEEDDYDQ", "length": 733, "header": "tr|I3L7G2-1|I3L7G2_PIG Isoform 1 of Radial spoke head component 4A OS=Sus scrofa OX=9823 GN=RSPH4A PE=4 SV=2 CANONICAL=I3L7G2-1" }, "locus": { "chromosome": "1", "start_pos": 44985078, "end_pos": 44964566, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024566.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024566.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019967.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019967.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 460, "start_aa": "Thr", "end_pos": 460, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr460", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7G2", "url": "https://www.uniprot.org/uniprotkb/I3L7G2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524228", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524228", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8M1QHY3-1", "protein_name": "Radial spoke head protein 4 homolog A", "gene_name": "rsph4a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEITGEALNNNRLQTAASFKAFMMKNSTKTNLNLYDHLVRLLTRVMDERPENAVDVMEDMSLELKGSVLQEKQDTLRDSPSSSPALVLAEQQKTLFMHTAGDGGDHEEELVDSPLPNVAELAFFFEQAGVGLGREEIQRIFLALKHLVDTQLLLRCRFWGKILGTQGNYLVAEGEFREGEGEEDEGTEQTPEEDEREEELQEGKDEAELVEAADPLPKSTYKPSASVPKEGNHTGANKFTYFVCQEPGMPWVRLPVVTPVQITVARQIRRFFTGKLDAPVVSYPPFPGNEANYLRAQIARISAGTHVSPLGFYQFGEDEGEDDGLRDSFEENPTFEGIQVNEMAESLNLWVHHVQHILTQGRCVWVNVTKKPVDDVDEDAEDEEREEEPDELEPEVGPPLLTPLSEDAKLNDTPPWSSMMSSNIIPQFAIAVLRSNLWPGAYAYCSGKNFGNIYIGWGLKFIGEPFTPVLPPPPQSEFPSGPETTEALDPSVEEEQALKAAMEEQTAAMEETEDLEEEEDEDDD", "length": 524 }, "evidence": [ { "id": "I3L7G2", "url": "https://omabrowser.org/oma/group/I3L7G2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D4A8S8-1", "protein_name": "Radial spoke head component 4A", "gene_name": "Rsph4a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MENSTSLKQEKENQEPEGAERSWQGESEVSPPDPALASPEYREEEQRSDTEPSPKRSPSWGSQPRASLSLGHLTAGLGVSSSPPPPPLEFHSTPLQTTTTQDPVTASHAERAPSGITDTGTPYSDPWEPSSAARKSTSHYTSHTEESAFPLSQPPHPDLGGRRDAAWNKPKYKGLRFDLLQEEDSNSNCDPDQPEVGASEAAPSMLEVAVQNAKAYLLSTSSKSGLNLYDHLSKVLTKILDERPVDAVDVVENISQDVKMSHFDKKLDTLHNENEMLPAYELAETQKALFLQGHLEGADSELEEEIAESSLPNVMESAYYFEQAGVGLGTDETYRIFLALKQLTDTHPIQRCRFWGKILGLEMNYIVAEVEFRDGEDEEEVEEEGIAEERDNGGSEAGDSEEDELPKPLYKAPQAIPKEESRTGANKYVYFVCSEPGRPWVRLPSVTPAQIVTARKIKKFFTGRLDAAIVSYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEVEGGRDSYEENSDFEGIQVIDLVESLSNWVHHAQYILPQGRCNWFNPTQKDEEEEEEDEEKGEEPDYVEQEVGPPLLTPISEDLVCKFFIGFQRFRIYPLGRHGCPQISFHSTPSLSFDPIFGLEHMPFPTARSLKTCT", "length": 652 }, "evidence": [ { "id": "I3L7G2", "url": "https://omabrowser.org/oma/group/I3L7G2/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3I566-1", "protein_name": "Radial spoke head protein 4 homolog A", "gene_name": "Rsph4a", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MENSTPLNQEKETQEPKEAEELWEGAAAASPQDPGFLAPECLEEEPRSDTEPHRRMSPSWGRQSRASLSLEDLTGPLVSSSPPLLPSVFPSTPPLIASLQDRVASSPAERVPGGISDSATPHSDAWDSASAARQITSHYMSQSEESAFPQSQPLQFDLRGPGDASPDKPKVKGLRFDLLQEEDSNSNCDPDQPEFGANEAAPSMLEVAIQNAKAYLLSTSSQSGLNLYDHLSNVLTKILDERPADAVDIIENISKDVKMANFNKKLDTLHNENEMLPAYEIAEKQKALFLQGQVEATDPELEEEIAESSLPNVMESAYYFEQAGVGLGTDETYRVFLALKQLTDTHPIQRCRFWGKILGLEMNYIVAEVEFRAGEDEEEVEEEGVAEERDAGESEAGEGEEDELPKSEYKAPQAIPKEENRTGTNKYVYFVCNEPGRPWMKLPSVTPAQIVTARKIKKFFTGRLDAAIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEMEGGRDSYEENPDFEGIQVTDLVESLSNWVHHVQYILPQGRCTWFNPIQKNEEEEEEEDEDKEEKGEEPDYIEQEVGPPLLTPISEDLDIQNIPSWTTRLSSNLIPQYAIAVLRSNLWPGAYAISNGKKFENFYIGWGHKYSVENYTPPGLPPVYQEYPSGPEITEMDDPSVDEEQAFRTAQEASVLSADENEETEDEEEDDDD", "length": 716 }, "evidence": [ { "id": "I3L7G2", "url": "https://omabrowser.org/oma/group/I3L7G2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5TD94-1", "protein_name": "Radial spoke head protein 4 homolog A", "gene_name": "RSPH4A", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDSTSPKQEKENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKTPLGGPAGPETSSPAPVSPREPSSSPSPLAPARQDLAAPPQSDRTTSVIPEAGTPYPDPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHLCGRRDVSYNNAKQKELRFDVFQEEDSNSDYDLQQPAPGGSEVAPSMLEITIQNAKAYLLKTSSNSGFNLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQKALFLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRIFLALKQLTDTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERDNGESEAHEDEEDELPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPAQIVIARKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEEAEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQGRCNWFNSIQKNEEEEEEEDEEKDDSDYIEQEVGLPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLQSNLWPGAYAFSNGKKFENFYIGWGHKYSPDNYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAAQEAVLLAAENEESEEDEDEEDDYD", "length": 716 }, "evidence": [ { "id": "I3L7G2", "url": "https://omabrowser.org/oma/group/I3L7G2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BYM7-1", "protein_name": "Radial spoke head protein 4 homolog A", "gene_name": "Rsph4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENSTSLKQEKENQEPGEAERLWQGESDVSPQEPGPPSPEYREEEQRTDTEPAPRMSPSWSHQSRVSLSTGDLTAGPEVSSSPPPPPLQFHSTPLNTETTQDPVAASPTEKTANGIADTGTPYSDPWESSSAAKQSTSHYTSHAEESTFPQSQTPQPDLCGLRDASRNKSKHKGLRFDLLQEEGSDSNCDPDQPEVGASEAAQSMLEVAIQNAKAYLLSTSSKSGLNLYDHLSKVLTKILDERPADAVDIIENISQDVKMAHFNKKLDTLHNEYEMLPAYEIAETQKALFLQGHLEGADSELEEEMAESSLPNVMESAYYFEQAGVGLGTDETYRVFLALKQLTDTHPIQRCRFWGKILGLEMNYIVAEVEFRDGEDEEEVEEEGIAEERDNGGSEAGEEEEEELPKSLYKAPQVIPKEESRTGANKYVYFVCNVPGRPWVRLPSVTPAQIVTARKIKKFFTGRLDAAVISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEVEGGRDSYEENPDFEGIQVIDLVESLSNWVHHVQYILPQGRCNWFNPIQKDEDEEEEEEEDEEKGEEPDYIEQEVGPPLLTPISEDLGIQNIPSWTTQLSSNLIPQYAIAVLRSNLWPGAYAFSNGKKFENFYIGWGHKYCVENYTPPSPPPVYQEYPSGPEITEMNDPSVEEEQAFRMTQEPVALSTEENEGTEDEDEDDED", "length": 716 }, "evidence": [ { "id": "I3L7G2", "url": "https://omabrowser.org/oma/group/I3L7G2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "radial spoke", "id": "GO:0001534", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001534", "evidence": [ { "database": "UniProtKB", "id": "I3L7G2", "url": "https://www.uniprot.org/uniprotkb/I3L7G2" } ], "pmid": "" }, { "name": "axoneme", "id": "GO:0005930", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005930", "evidence": [ { "database": "UniProtKB", "id": "I3L7G2", "url": "https://www.uniprot.org/uniprotkb/I3L7G2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "cilium movement involved in cell motility", "id": "GO:0060294", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060294", "evidence": [ { "database": "UniProtKB", "id": "I3L7G2", "url": "https://www.uniprot.org/uniprotkb/I3L7G2" } ], "pmid": "" }, { "name": "cilium movement", "id": "GO:0003341", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003341", "evidence": [ { "database": "UniProtKB", "id": "I3L7G2", "url": "https://www.uniprot.org/uniprotkb/I3L7G2" } ], "pmid": "" }, { "name": "axoneme assembly", "id": "GO:0035082", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035082", "evidence": [ { "database": "UniProtKB", "id": "I3L7G2", "url": "https://www.uniprot.org/uniprotkb/I3L7G2" } ], "pmid": "" }, { "name": "cilium assembly", "id": "GO:0060271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060271", "evidence": [ { "database": "UniProtKB", "id": "I3L7G2", "url": "https://www.uniprot.org/uniprotkb/I3L7G2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 181, "end_pos": 183, "annotation": "n_glycosylation_sequon" }, { "start_pos": 266, "end_pos": 268, "annotation": "n_glycosylation_sequon" }, { "start_pos": 491, "end_pos": 493, "annotation": "n_glycosylation_sequon" }, { "start_pos": 713, "end_pos": 715, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 460 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 181, "end_pos": 183 }, { "start_pos": 266, "end_pos": 268 }, { "start_pos": 491, "end_pos": 493 }, { "start_pos": 713, "end_pos": 715 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], 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"https://www.uniprot.org/uniprotkb/A0A5G2RAU8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7N6", "url": "https://www.uniprot.org/uniprotkb/I3L7N6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7N6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7N6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAAATAGAGAGAGAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYYPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEDNFWMVMVVRNPIIEKQSKDGKPIVEYQEEELLDKVYSSVLQQCYSMYKLFNGTFLRAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLSIVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPIRAEMPGNLQHYGRFLTGPLNLNDPEAKCRFPKIFVNTDDTYEALHLIVYKAMSAAVCFMIDASIQPTLDFCRRLDGIVGPQLTVLASDICEQFNVNKRISGSEKEPQFKYIYFNHMNLAEKSTIHMRKTPSVSLTSVHPDLMKILGDINSDFTREDEDEEVIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD", "length": 482, "header": "tr|I3L7N6-1|I3L7N6_PIG Isoform 1 of Vacuolar fusion protein CCZ1 homolog OS=Sus scrofa OX=9823 GN=CCZ1 PE=1 SV=1 CANONICAL=I3L7N6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RAU8-1", "url": "https://www.uniprot.org/uniprotkb/I3L7N6/entry#A0A5G2RAU8-1", "sequence": { "sequence": "MAAATAGAGAGAGAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYYPNEVEKNEKIRNVGLCEAIVQFTRLFGIL", "length": 78, "header": "tr|A0A5G2RAU8-1|A0A5G2RAU8_PIG Computationally mapped isoform of CCZ1/INTU/HSP4 first Longin domain-containing protein OS=Sus scrofa OX=9823 GN=CCZ1 PE=3 SV=1 CANONICAL=I3L7N6-1" }, "locus": { "chromosome": "3", "start_pos": 5228491, "end_pos": 5226830, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078156.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078156.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071265.1", "url": "https://www.ensembl.org/id/ENSSSCP00000071265.1" } ] } }, { "isoform_ac": "I3L7N6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7N6/entry#I3L7N6-1", "sequence": { "sequence": "MAAATAGAGAGAGAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYYPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEDNFWMVMVVRNPIIEKQSKDGKPIVEYQEEELLDKVYSSVLQQCYSMYKLFNGTFLRAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLSIVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPIRAEMPGNLQHYGRFLTGPLNLNDPEAKCRFPKIFVNTDDTYEALHLIVYKAMSAAVCFMIDASIQPTLDFCRRLDGIVGPQLTVLASDICEQFNVNKRISGSEKEPQFKYIYFNHMNLAEKSTIHMRKTPSVSLTSVHPDLMKILGDINSDFTREDEDEEVIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD", "length": 482, "header": "tr|I3L7N6-1|I3L7N6_PIG Isoform 1 of Vacuolar fusion protein CCZ1 homolog OS=Sus scrofa OX=9823 GN=CCZ1 PE=1 SV=1 CANONICAL=I3L7N6-1" }, "locus": { "chromosome": "3", "start_pos": 5228491, "end_pos": 5201522, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028320.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028320.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020042.1", "url": "https://www.ensembl.org/id/ENSSSCP00000020042.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7N6", "url": "https://www.uniprot.org/uniprotkb/I3L7N6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100513979", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513979", "resource": "KEGG Pathway" }, { "id": "R-SSC-8876198", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8876198", "resource": "Reactome", "description": "RAB GEFs exchange GTP for GDP on RABs" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A140UHX9-1", "protein_name": "CCZ1 homolog, vacuolar protein trafficking and biogenesis associated", "gene_name": "Ccz1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAAAAGTGTWAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKAVVEYQEEELLDKVYSSVLQQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLSVVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPVRAEMPGNLQHYGRFLTGPLNLNDPEAKCRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASTQLTLDFCRRLDSIVGPQLTVLASDICEQFNINKRISGSEKEPQFKFIYFNHMNLAEKSTIHMRKTPSVSLTSVHPDLMKILGDINSDFTRADEDEEIIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD", "length": 480 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A9J7FVR3-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog isoform X1", "gene_name": "LOC100769148", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAAAAAGTGTWAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMIMVVRNPIIEKQSKDGKPIVEYQEEELLDKVYSSVLQQCYSMYKLFNGTFLKAMEDGGVKLLKERLQKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLSVVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHMEPELAGRDSPIRAEMPGNLQHYGRFLTGPLNLNDPEAKCRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASTQLTLDFCRRLDSIVGPQLTVLASDICEQFNINKRISGSEKEPQFKFIYFNHMNLAEKSTIHMRKTPSVSLTSVHPDLMKILGDINSDFTRRAVYMKLSHLKLSYRADEDEEIIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD", "length": 495 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "C0Z274-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGMASMSSGTESLRLCVFDLRRGQHEGQELDKILFFYPPDLTFSTQLSVIGLSEGLITFTRLFSPEAACEVIEAERHSHVFYEAEPDIWMVMIVEKNKEIEAVWRIDALRRVLKEVHSLFVMFQGSIRALLEKEPTGGLVRSHLYPFITDYLNDLFVGKKQQLPSFRDTLKERGTVQMLTLARDAALEVQSLVGVLDSCAGTVRCHSVILFHDLLVSTTLSPDDTVDLFAFSVMRLTTNALSSGTSSWSYLRKGSGSPQISSRSTTVPPLGSGGTLPSGNGSSTGRVIRPLQHDKWSKGKDGFLVTDIWGLDATPTILIQKTQESFYLLTYQYKSLTLVLLVPIAAIVNGELDISFVKQQVIENASTKILKVEEKLSKGWGGENAYHVSGYRYLLVDNDMEVSRASPPGKVATLAKESLLALNKLREEVDTEKNRSKQEKDMEICIRAKNNTWVIARLNRGKELYMALEKASETLLDATDSVQRFSNRYCSGAFPMD", "length": 497 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAAAAGAGSGPWAAQEKQFPPALLSFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKPVIEYQEEELLDKVYSSVLRQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLNIVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPIRAEMPGNLQHYGRFLTGPLNLNDPDAKCRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASVHPTLDFCRRLDSIVGPQLTVLASDICEQFNINKRMSGSEKEPQFKFIYFNHMNLAEKSTVHMRKTPSVSLTSVHPDLMKILGDINSDFTRVDEDEEIIVKAMSDYWVVGKKSDRRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD", "length": 482 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0VD30-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAAAASGAGAGAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYYPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKPVVEYQEEELLDKVYSSVLQQCYSMYKLFNGTFLRAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLSIVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPIRAEMPGNLQHYGRFLTGPLNLNDPEAKCRFPKIFVNTDDTYEALHLIVYKAMSAAVCFMIDASIQPTLDFCRRLDSIVGPQLTVLASDICEQFNINKRMSGSEKEPQFKFIYFNHMNLAEKSTVHMRKTPSVSLTSVHPDLMKILGDINSDFTRVDEDEEIIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD", "length": 480 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54IQ5-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVPIVETSLHYFVIYCSKLGQKEGTEHEKILFFYPPTINIGEQTNSVGISEAYVLFTKQFSPGQPCEFIHTKKSTLALLHPEEDIWMVLSVYNPTGITGKDNKREYIEDEVDDIILMKTIQQIYQTWQTFNGSIMSLASKTSYDNVRKRLESFVKPYIQQIQFDQLDLFTSLDGIKFLPLNKNVYLTIFGYINSVDLHFQSTLSSFRFGLVLYKDNLILSSLEQNETRILYNYLINMVKVGPDINSSNSMIVKNNSNNIPIWQTKGVRTGFMIQKDSLPMVWLGGKPQAMIVYEQKDTFLLFLIDPSDLPQLPFEDLSASLVQNFEFVNLTLEQHYAKKANFDEQYKYIYFNQMNLAIRSPIKPKGPELNKETMKLLNEIHADFEGGLSSEIIVKTQQDRWIVAKKIDFREFYIMFDNKNSSILEINEEVKNATTKFFKFLFTD", "length": 445 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8C1Y8-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "Ccz1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAAGPGAWAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKAVVEYQEEELLDKVYSSVLQQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTLHLQSCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLSVVKYTAFLYNDQLIWSGLEQDDMRILYKYLTTSLFPRHIEPELAGRDSPVRAEMPGNLQHYGRFLTGPLNLNDPEAKCRFPKIFVNTDDTYEELHLIVYKAMSAAVCFMIDASTPLTLDFCRRLDSIVGPQLTVLASDICEQFNINKRISGSEKEPQFKFIYFNHMNLAEKSTIHMRKTPSVSLTSVHPDLMKILGDINSDFTRADEDEEIIVKAMSDYWVVGKKSDQRELYVILSQKNANLIEVNEEVKKLCATQFNNIFFLD", "length": 480 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VZL5-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "Ccz1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAKLLQRVEITLRSFYIFNSTFGQVEGEEHKKVLFYHPNDIELNTKIKDVGLSEAIIRFTGTFTSEDDCQALHTQKTTQLFYQPEPGYWLVLVLNVPKEVRLKEGVEVADYRGAEISDRIYRAILRQCYQMFRFQNGCFSSCGSEEPNPDKRRELLCQKLLQFYDQHLTNLRDPAQCDIIDMLHSIQYLPLDKTLFLRAQNFGTLCETFPDIKESIMLYQEQVLCGGKLSPEDLHCVHSYVVQHVLKVEASSSTIAVSPSLKRSISECQVGGFVRSRQKVAGDEHDAVNEEDHPMKVYVTLDKEAKPYYLLIYRALHITLCLFLNADQVAPKQDLYDDLHAYMAPQLTSLARDISSELTKEAVGAAGQDNSSGNSETAPKYLFINEQSLQHHTNFQRHLPQGLPRNVLSIIADLANGSGKAEMESAPAEEVQVKTTNDYWIVKRRCNYRQYYVILCNSKATLLDVTQEARRIFEQELTDDVFFDK", "length": 485 }, "evidence": [ { "id": "I3L7N6", "url": "https://omabrowser.org/oma/group/I3L7N6/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "vacuolar transport", "id": "GO:0007034", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007034", "evidence": [ { "database": "UniProtKB", "id": "I3L7N6", "url": "https://www.uniprot.org/uniprotkb/I3L7N6" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "I3L7N6", "url": "https://www.uniprot.org/uniprotkb/I3L7N6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "Mon1-Ccz1 complex", "id": "GO:0035658", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035658", "evidence": [ { "database": "UniProtKB", "id": "I3L7N6", "url": "https://www.uniprot.org/uniprotkb/I3L7N6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 149, "end_pos": 151, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L7N6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 482, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L7N6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L7N6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L7N6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7N6" }, { "id": "PF19032", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19032" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CCZ1/INTU second Longin", "eco_id": "ECO_0000259", "start_pos": 220, "end_pos": 345, "start_aa": "Val", "end_aa": "Ile", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L7N6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7N6" }, { "id": "PF19033", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19033" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CCZ1/INTU/HPS4 third Longin", "eco_id": "ECO_0000259", "start_pos": 372, "end_pos": 470, "start_aa": "Lys", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L7N6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7N6" }, { "id": "PF19031", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19031" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CCZ1/INTU/HSP4 first Longin", "eco_id": "ECO_0000259", "start_pos": 25, "end_pos": 150, "start_aa": "Leu", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 149, "end_pos": 151 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"uniprot_canonical_ac": "I3L7P4-1", "uniprot_ac": "I3L7P4", "uniprot_id": "I3L7P4_PIG", "mass": { "chemical_mass": 51578.0, "monoisotopic_mass": 51578.0 }, "refseq": {}, "gene_names": [ { "name": "METTL17", "type": "recommended", "evidence": [ { "id": "I3L7P4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ] } ], "protein_names": [ { "name": "Ribosome assembly protein METTL17, mitochondrial", "type": "recommended", "evidence": [ { "id": "I3L7P4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7P4/entry#names_and_taxonomy" } ] }, { "name": "Methyltransferase-like protein 17", "type": "synonym", "evidence": [ { "id": "I3L7P4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7P4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Mitochondrial ribosome (mitoribosome) assembly factor. Binds at the interface of the head and body domains of the mitochondrial small ribosomal subunit (mt-SSU), occluding the mRNA channel and preventing compaction of the head domain towards the body. Probable inactive methyltransferase: retains the characteristic folding and ability to bind S-adenosyl-L-methionine, but it probably lost its methyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4#function" }, { "database": "UniProtKB", "id": "ARBA00045681", "url": "https://www.uniprot.org/uniprotkb/ARBA00045681#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "METTL17", "url": "https://www.uniprot.org/uniprotkb/I3L7P4", "locus": { "chromosome": "7", "start_pos": 78138233, "end_pos": 78145331, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021718", "url": "https://www.ensembl.org/id/ENSSSCG00000021718" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021718", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021718", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR015324", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015324", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052571", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052571", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PRKHPGI", "url": "https://omabrowser.org/oma/group/PRKHPGI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR13184", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13184", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR13184:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR13184:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF09243", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF09243", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7P4-1", "url": "https://www.uniprot.org/uniprotkb/I3L7P4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATAAGAGCLLTLRGWRRGLGVAPRCRALAALVPGVSQVDNKSDFLGKKSHRRHPGILQLSRVRLPQALVDAATLLLLESSMPNMEKQVQALTNYLWSRHLPVETEELQRRAVHLEKKFLENADSCQMEEKLHGDVLRALRRTTYHWQELSYNEGLSLLYMAARLDGGFAAVSRAFHEIQARFPEFQPQTLMDFGSGTGSVTWAAHSTWGQSLREYMCVDSSAAMLDLAEKLLKGGSESGLPYVPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRNDIVQTLWRKTSHFLILVENGTKAGHSLLMDARDLVLNEKEKSPLDPRPGFVFAPCPHELQCPQLSAPKPLACSFSQAYHPIPFSWNKKPKEEKFSMVILARGYPEEASRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVITARRHGRDLYRCARVSSWGDLLPVTTPSELPPSSAQDPPES", "length": 461, "header": "tr|I3L7P4-1|I3L7P4_PIG Isoform 1 of Ribosome assembly protein METTL17, mitochondrial OS=Sus scrofa OX=9823 GN=METTL17 PE=3 SV=2 CANONICAL=I3L7P4-1" }, "isoforms": [ { "isoform_ac": "I3L7P4-1", "url": "https://www.uniprot.org/uniprotkb/I3L7P4/entry#I3L7P4-1", "sequence": { "sequence": "MATAAGAGCLLTLRGWRRGLGVAPRCRALAALVPGVSQVDNKSDFLGKKSHRRHPGILQLSRVRLPQALVDAATLLLLESSMPNMEKQVQALTNYLWSRHLPVETEELQRRAVHLEKKFLENADSCQMEEKLHGDVLRALRRTTYHWQELSYNEGLSLLYMAARLDGGFAAVSRAFHEIQARFPEFQPQTLMDFGSGTGSVTWAAHSTWGQSLREYMCVDSSAAMLDLAEKLLKGGSESGLPYVPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRNDIVQTLWRKTSHFLILVENGTKAGHSLLMDARDLVLNEKEKSPLDPRPGFVFAPCPHELQCPQLSAPKPLACSFSQAYHPIPFSWNKKPKEEKFSMVILARGYPEEASRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVITARRHGRDLYRCARVSSWGDLLPVTTPSELPPSSAQDPPES", "length": 461, "header": "tr|I3L7P4-1|I3L7P4_PIG Isoform 1 of Ribosome assembly protein METTL17, mitochondrial OS=Sus scrofa OX=9823 GN=METTL17 PE=3 SV=2 CANONICAL=I3L7P4-1" }, "locus": { "chromosome": "7", "start_pos": 78145308, "end_pos": 78138369, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031922.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031922.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020050.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020050.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A0R4IJY0-1", "protein_name": "Ribosome assembly protein METTL17, mitochondrial", "gene_name": "mettl17", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MHLLGSRVFVKCSRCHVALSLKEAIRCQSSAAPLEQADYLNGAPHRKHPGVTNLKTVQLPEQLQLAAQSILQRADVKSLTERAQKLSNFLWSRKRVIESSQLREKAIILERKFLEEERNVSENDIDHNLEARIRKKVLSELRRTTYHRAALRYNEDLGLVYMVARLAGGYAAVLRALNEIKKRDPLFVPYSLLDFGSGLGTGTWAAHRLWGDSLKEYVCVDSSGDMNTLAEQLLLEGSERNNPTIKQVYFRQFLPVSPKVQFDLVVAAFSLSELATLDERLNVISTLWRKTNSYLVLVENGTKEGHQILMEARDAILKREDEILHDPRRPSIFAPCTHELKCPKLIRQPVVPCNFFQFYYSLPLSRSQERQQERFSYLIVSRSDGEKAQKAEHWDMARVIAQVHRRPRHVQCQLCCVNGELKQLAVTARRHGKDMYRCARNSDWGDLLPVFHKEDEHTINDETE", "length": 464 }, "evidence": [ { "id": "I3L7P4", "url": "https://omabrowser.org/oma/group/I3L7P4/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "D3Z930-1", "protein_name": "Ribosome assembly protein METTL17, mitochondrial", "gene_name": "Mettl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATARASRFLLLFCRSCRSLRGPQSRAFAALVPGVSQVDNRSDFLGKKPHRKHPGILHLPHVHLPQALTDAAQLLLLERPKRSVEKQVQALTNYLWSRHLPVEPEELQRRAAYLEKKFLEKQDSTQTEEKLREAVLHALRKTTYHWQELSYNEELSLIYMAARLDGGFAAVFRAFHEIQARIPEFQPQTLMDFGSGTGSVAWAAHSTWGQSLREYVCVDRSAAMLGLAEKLLKGGSESGKPCIPGVFFRQFLPVSPKVQFDVVVSAFALSELPSRADRTEVLQNLWRKTSHFLVLVENGTKAGHRLLMDARNLILGDKEKSPLDLRPSFVFAPCPHELPCPQLNAAKSLACSFSQAYQPIPFHWNKKPKEETFSMVILARGSPKEANRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVVTARRHGRDLYRCARVSSWGDLLPVISPSEFPPPSPAEEPPES", "length": 461 }, "evidence": [ { "id": "I3L7P4", "url": "https://omabrowser.org/oma/group/I3L7P4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MEK1-1", "protein_name": "Ribosome assembly protein METTL17, mitochondrial", "gene_name": "METTL17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MATGRGSRYLLTIGRWRRSFGIAPQFRALAALVPGVSHVDNKSDFLGKRPHRRHPGILQLSCVRLPQALAEAAQLLLLGSAMPNMEKQVQALTNYLWSRHLPVEPEELQRRAVLLEKKILENADSCQTEKHHEEILHALRRTTYHWQELSYSEGLSLVYMAARLDGGFAAVSRAFHEIQARLPEFQPQTLMDFGSGTGSVTWAAHSTWGQSLREYMCVDSSAAMLELAEKLLKGGSGSGMPCVPGVFFRQFLPVSPKVQFDVVVAAFSLSELPSKADRTDVVQTLWRKTGHFLVLIENGTKAGHSLLMDARDLVLNVRFFLLLSPYPPFPTYSHQFLCPHELPCPQLTASKPLACSFSQAYYPIPFSWNKKPKEEKFSLVILARGSPEKANRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVITARRHGRDLYRCARVSSWGDLLPVITPLELPPSAQDAQDAPES", "length": 466 }, "evidence": [ { "id": "I3L7P4", "url": "https://omabrowser.org/oma/group/I3L7P4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3U2U7-1", "protein_name": "Ribosome assembly protein METTL17, mitochondrial", "gene_name": "Mettl17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATARTPRFLLLFCRSCRSLRGPQSRAYAALVPGVSQVDNGSDFLGKKPHRKHPGILHLPHVQLPQALADAAQLMLFERPMRSVEKQVQALTNYLWSRHLPVEPEELQRRAAYLEKKFLEKQDSAPTEEKLREAVLHALRKTTYHWQELSYSEELSLIYMAARLDGGFAAVFRAFHEIQARIPEFRPQTLMDFGSGTGSVAWAAHRTWGQSLREYVCVDSSAAMLGLAEKLLKGGSESGKPCIPGVFFRQFLPVSPKVQFDVVVSAYALSELPSRADRIEVIQNLWRKTSHFLVLVENGTKAGHRLLMDARNLVLGEKEKSPLDLRPSFVFAPCPHELPCPQLNASKSLACSFSQAYHPIPFNWNKKPKEEIFSMVILARGSPKEANRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVVTARRHGRDLYRCARVSSWGDLLPVIAPSEFPPSSPDEEPPEN", "length": 461 }, "evidence": [ { "id": "I3L7P4", "url": "https://omabrowser.org/oma/group/I3L7P4/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H7H0-1", "protein_name": "Ribosome assembly protein METTL17, mitochondrial", "gene_name": "METTL17", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAALKCLLTLGRWCPGLGVAPQARALAALVPGVTQVDNKSGFLQKRPHRQHPGILKLPHVRLPQALANGAQLLLLGSAGPTMENQVQTLTSYLWSRHLPVEPEELQRRARHLEKKFLENPDLSQTEEKLRGAVLHALRKTTYHWQELSYTEGLSLVYMAARLDGGFAAVSRAFHEIRARNPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGEPYIPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVENGTKAGHSLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTNLACSFSQAYHPIPFSWNKKPKEEKFSMVILARGSPEEAHRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVLTARRHGRDLYRCARVSSWGDLLPVLTPSAFPPSTAQDPSES", "length": 456 }, "evidence": [ { "id": "I3L7P4", "url": "https://omabrowser.org/oma/group/I3L7P4/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VL60-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG13126", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNFSLNFTTRNLVPRLHRFTSKIAVDVEPAVVSALEHATLKPRKHPGVVRPNHVELPKQLNDTLKRIVGDHPVKKLIHDGQQLNAYIKSRHPPPTLEEIENKKRIVIEEVNTKMPLDRLATLDEDEAERWRRKRELEINKRLGQRIYAWKRIEYGAYESLVYAIARGAQEYAVLKRVLTELAQRDEQFRPRSFFDFGSGIGTGMWVASELWREHIFEYYNVDRSREMNEISELILRDGHENKQIALRNVFYRQFLPAIETNYDLVIISHTLFELENKEQREDVLRNLWRKCDGYLVIVEEGTRRGSELVNEARQFLLEQEQEGHTVAPCPHDLVCPRLRDLADRTPCNFPISYAPLRLGSDFLADRHTSLYSYAILKKGSQSDSSSSWPRIVRPTLVRSKHAICRLCTEKGTLQEVIFTKSKHGKSAYSCAKVSRWGDRLPMSLGQPQIKQESIESEEPPVLA", "length": 463 }, "evidence": [ { "id": "I3L7P4", "url": "https://omabrowser.org/oma/group/I3L7P4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" }, { "name": "mitochondrial matrix", "id": "GO:0005759", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005759", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 5, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" }, { "name": "4 iron, 4 sulfur cluster binding", "id": "GO:0051539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051539", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" }, { "name": "methyltransferase activity", "id": "GO:0008168", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008168", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" }, { "name": "mitochondrial ribosome binding", "id": "GO:0097177", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097177", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" }, { "name": "S-adenosyl-L-methionine binding", "id": "GO:1904047", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1904047", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "translation", "id": "GO:0006412", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006412", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" }, { "name": "methylation", "id": "GO:0032259", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032259", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" }, { "name": "mitochondrial small ribosomal subunit assembly", "id": "GO:0180026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0180026", "evidence": [ { "database": "UniProtKB", "id": "I3L7P4", "url": "https://www.uniprot.org/uniprotkb/I3L7P4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 299, "end_pos": 301, "annotation": "n_glycosylation_sequon" }, { "start_pos": 41, "end_pos": 43, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 299, "end_pos": 301 }, { "start_pos": 41, "end_pos": 43 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L7P6-1", "uniprot_ac": "I3L7P6", "uniprot_id": "I3L7P6_PIG", "mass": { "chemical_mass": 69642.0, "monoisotopic_mass": 69642.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF398", "type": "recommended", "evidence": [ { "id": "I3L7P6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ] } ], "protein_names": [ { "name": "Zinc finger protein 398", "type": "synonym", "evidence": [ { "id": "I3L7P6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7P6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF398", "url": "https://www.uniprot.org/uniprotkb/I3L7P6", "locus": { "chromosome": "9", "start_pos": 109171636, "end_pos": 109200789, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030294", "url": "https://www.ensembl.org/id/ENSSSCG00000030294" } ] } } ], "crossref": [ { "id": "ENSSSCG00000030294", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030294", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100522942", "url": "https://www.ncbi.nlm.nih.gov/gene/100522942", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003655", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003655", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100522942", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522942", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "TERAHTC", "url": "https://omabrowser.org/oma/group/TERAHTC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L7P6", "url": "https://www.orthodb.org/?gene=I3L7P6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24394:SF48", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24394:SF48", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287B5L1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5L1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B5L1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B5L1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7P6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7P6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAEAAPAPTSEWDSECLTSLQALPLPTAPAANEAHLQTAAISLWTVVAAVQAIERKVEVHSRRLLHLEGRTGTAEKKLASCEKTVADLGNQLEGKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWILRLPPGIKGDIPKVPVTFDDISIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAMNQPDVLSQIQPEGGQTEDQAGPEESEIPTDPSEDPSISTSDILSWIKQEEETQVGAPQEPKESDMCKGTYADEELVIKAEGLATASLCPEVPVPFSSPPAAAAKDPFPDVAFKSQQPAPMTPFGRPATDLAEASEGQVTFTQLGSYPLPPPAGEQVFSCHHCGKTLSQDTLLSHECGPPAEPPGPCAQCPKHLPQQSPAGETPPTCPHCARTFTHPSRLTYHLRVHNSAERPFPCPDCPKRFADQARLASHRRAHASERPFRCSQCGRSFSLKLSLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCPDCSKSFMRKEHLLNHRRLHTGERPFSCAHCGKSFIRKHHLMKHQRIHTGERPYPCASCGRSFRYKQTLKDHLRSGHGGACGGNSDPSGQPPDPPGPLLTGLDTSGLGVSTEGLEANQWYGEGSGGGVL", "length": 634, "header": "tr|I3L7P6-1|I3L7P6_PIG Isoform 1 of Zinc finger protein 398 OS=Sus scrofa OX=9823 GN=ZNF398 PE=3 SV=3 CANONICAL=I3L7P6-1" }, "isoforms": [ { "isoform_ac": "A0A287B5L1-1", "url": "https://www.uniprot.org/uniprotkb/I3L7P6/entry#A0A287B5L1-1", "sequence": { "sequence": "MAEAAPAPTSEWDSECLTSLQALPLPTAPAANEAHLQTAAISLWTVVAAVQAIERKVEVHSRRLLHLEGRTGTAEKKLASCEKTVADLGNQLEGKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWILRLPPGIKGDIPKVPVTFDDISIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAMNQPDVLSQIQPEGGQTEDQAGPEESEIPTDPSEDPSISTSDILSWIKQEEETQVGAPQEPKESDMCKGTYADEELVIKAEGLATASLCPEVPVPFSSPPAAAAKDPFPDVAFKSQQPAPMTPFGRPATDLAEASEGQVTFTQLGSYPLPPPAGEQVFSCHHCGKTLSQDTLLSHECGPPAEPPGPCAQCPKHPSSPAGETPPTCPHCARTFTHPSRLTYHLRVHNSAERPFPCPDCPKRFADQARLASHRRAHASERPFRCSQCGRSFSLKLSLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCPDCSKSFMRKEHLLNHRRLHTGERPFSCAHCGKSFIRKHHLMKHQRIHTGERPYPCASCGRSFRYKQTLKDHLRSGHGGACGGNSDPSGQPPDPPGPLLTGLDTSGLGVSTEGLEANQWYGEGSGGGVL", "length": 632, "header": "tr|A0A287B5L1-1|A0A287B5L1_PIG Computationally mapped isoform of Zinc finger protein 398 OS=Sus scrofa OX=9823 GN=ZNF398 PE=3 SV=2 CANONICAL=I3L7P6-1" }, "locus": { "chromosome": "9", "start_pos": 109200538, "end_pos": 109175833, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000045277.3", "url": "https://www.ensembl.org/id/ENSSSCT00000045277.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000051780.2", "url": "https://www.ensembl.org/id/ENSSSCP00000051780.2" } ] } }, { "isoform_ac": "I3L7P6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7P6/entry#I3L7P6-1", "sequence": { "sequence": "MAEAAPAPTSEWDSECLTSLQALPLPTAPAANEAHLQTAAISLWTVVAAVQAIERKVEVHSRRLLHLEGRTGTAEKKLASCEKTVADLGNQLEGKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWILRLPPGIKGDIPKVPVTFDDISIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAMNQPDVLSQIQPEGGQTEDQAGPEESEIPTDPSEDPSISTSDILSWIKQEEETQVGAPQEPKESDMCKGTYADEELVIKAEGLATASLCPEVPVPFSSPPAAAAKDPFPDVAFKSQQPAPMTPFGRPATDLAEASEGQVTFTQLGSYPLPPPAGEQVFSCHHCGKTLSQDTLLSHECGPPAEPPGPCAQCPKHLPQQSPAGETPPTCPHCARTFTHPSRLTYHLRVHNSAERPFPCPDCPKRFADQARLASHRRAHASERPFRCSQCGRSFSLKLSLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCPDCSKSFMRKEHLLNHRRLHTGERPFSCAHCGKSFIRKHHLMKHQRIHTGERPYPCASCGRSFRYKQTLKDHLRSGHGGACGGNSDPSGQPPDPPGPLLTGLDTSGLGVSTEGLEANQWYGEGSGGGVL", "length": 634, "header": "tr|I3L7P6-1|I3L7P6_PIG Isoform 1 of Zinc finger protein 398 OS=Sus scrofa OX=9823 GN=ZNF398 PE=3 SV=3 CANONICAL=I3L7P6-1" }, "locus": { "chromosome": "9", "start_pos": 109200538, "end_pos": 109175833, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024387.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024387.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020052.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020052.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100522942", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100522942", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D3ZGH2-1", "protein_name": "Zinc finger protein 398", "gene_name": "Zfp398", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEATAAPTSEWDSECLTSLQPLPLPPPPAANEAHLQTAAISLWTVVAAVQAIERKVEVHSRRLLHLEGRTGTAEKKLAGCEKTVTELGNQLDGKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWILRLPPGIKGDIPKVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAMNQPDVLSQIQPEGEHSTDDQPRPEASEMPADPSEEPGLSTSDILSWIKQEEEPQVGVPQESKESELYKGTYADEELVIKAEDLARASLCPEVPVAFSAPPPAAAKDTFSDIAFKSQQCTPMAPFGRTATDLPEASEGQVTFTQLGSYPLPPPVGEQVFSCHHCGKNLSQDMLMTHQCSHAAEHPLTCAQCPKHFTPQADLGSTSQDHANETPPTCPHCARTFTHPSRLTYHLRVHNSTERPFLCPDCPKRFADQARLTSHRRAHATERPFRCPQCGRSFSLKISLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFQCPHCGKSFIRKHHLMKHQRIHTGERPYPCAVCGRSFRYKQTLKDHLRTGHNGGCAGDRDPSVQPPDPPGPLLTALETSGLGVSTEGLESSQWYGEGSGGVVL", "length": 643 }, "evidence": [ { "id": "I3L7P6", "url": "https://omabrowser.org/oma/group/I3L7P6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "E1BNM7-1", "protein_name": "Zinc finger protein 398", "gene_name": "ZNF398", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAEAAPAPTSEWDSECLTSLQALPLPAAPAANEAHLQTAAISLWTVVAAVQAIERKVEVHSRRLLHLEGRTGTAEKKLASCEKTVADLGNQLEGKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWILRLPPGIKGDIPKVPVTFDDISIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAMNQPDVLSQIQPEGDRNTEDQTGPEESGIPTDPSEEPGISTSDILSWIKQEEETQVGAPQEPKESDMCKGTYADEELVIKAEGLARASLCPEVPVAFSSPAAAAKEPFPDMAFKSPQSAPLAPFGRPAADLAEASEGQVTFTQLGTYPLPPPAGEPVFSCHHCGKSLSQDLLLTHQCGPPGEHAAPCAQCPKHLPTPADGGPPAPARETPPTCPHCARTFTHPSRLTYHLRVHNSAERPFPCPDCPKRFADQARLASHRRAHASERPFRCAQCGRSFSLKISLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFSCTHCGKSFIRKHHLMKHQRIHTGERPYPCAQCGRSFRYKQTLKDHLRAGHGGGCGGDRDPSGPPPDPPGPLLPGLEASGLGVNPEGLEANQWYGEGSGGAVL", "length": 640 }, "evidence": [ { "id": "I3L7P6", "url": "https://omabrowser.org/oma/group/I3L7P6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8TD17-1", "protein_name": "Zinc finger protein 398", "gene_name": "ZNF398", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAEAAPAPTSEWDSECLTSLQPLPLPTPPAANEAHLQTAAISLWTVVAAVQAIERKVEIHSRRLLHLEGRTGTAEKKLASCEKTVTELGNQLEGKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWILRLPPGIKGDIPKVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQPDVLSQIQPEGEHNTEDQAGPEESEIPTDPSEEPGISTSDILSWIKQEEEPQVGAPPESKESDVYKSTYADEELVIKAEGLARSSLCPEVPVPFSSPPAAAKDAFSDVAFKSQQSTSMTPFGRPATDLPEASEGQVTFTQLGSYPLPPPVGEQVFSCHHCGKNLSQDMLLTHQCSHATEHPLPCAQCPKHFTPQADLSSTSQDHASETPPTCPHCARTFTHPSRLTYHLRVHNSTERPFPCPDCPKRFADQARLTSHRRAHASERPFRCAQCGRSFSLKISLLLHQRGHAQERPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFSCPHCGKSFIRKHHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNGGCGGDSDPSGQPPNPPGPLITGLETSGLGVNTEGLETNQWYGEGSGGGVL", "length": 642 }, "evidence": [ { "id": "I3L7P6", "url": "https://omabrowser.org/oma/group/I3L7P6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "negative regulation of transcription by RNA polymerase II", "id": "GO:0000122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000122", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "pmid": "" }, { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "pmid": "" }, { "name": "regulation of DNA-templated transcription", "id": "GO:0006355", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006355", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "pmid": "" }, { "name": "RNA polymerase II cis-regulatory region sequence-specific DNA binding", "id": "GO:0000978", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000978", "evidence": [ { "database": "UniProtKB", "id": "I3L7P6", "url": "https://www.uniprot.org/uniprotkb/I3L7P6" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": 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A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7T7", "url": "https://www.uniprot.org/uniprotkb/I3L7T7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "synaptonemal complex assembly", "id": "GO:0007130", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007130", "evidence": [ { "database": "UniProtKB", "id": "I3L7T7", "url": "https://www.uniprot.org/uniprotkb/I3L7T7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "synaptonemal complex", "id": "GO:0000795", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000795", "evidence": [ { "database": "UniProtKB", "id": "I3L7T7", "url": "https://www.uniprot.org/uniprotkb/I3L7T7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L7T7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 190, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L7T7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L7T7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L7V6-1", "uniprot_ac": "I3L7V6", "uniprot_id": "I3L7V6_PIG", "mass": { "chemical_mass": 63711.0, "monoisotopic_mass": 63711.0 }, "refseq": {}, "gene_names": [ { "name": "PODXL2", "type": "recommended", "evidence": [ { "id": "I3L7V6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7V6" } ] } ], "protein_names": [ { "name": "Podocalyxin like 2", "type": "synonym", "evidence": [ { "id": "I3L7V6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7V6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L7V6", "url": "https://www.uniprot.org/uniprotkb/I3L7V6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PODXL2", "url": "https://www.uniprot.org/uniprotkb/I3L7V6", "locus": { "chromosome": "13", "start_pos": 72579311, "end_pos": 72622950, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021397", "url": "https://www.ensembl.org/id/ENSSSCG00000021397" } ] } } ], "crossref": [ { "id": "I3L7V6", "url": "https://alphafold.ebi.ac.uk/entry/I3L7V6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021397", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021397", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100624044", "url": "https://www.ncbi.nlm.nih.gov/gene/100624044", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013836", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013836", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042397", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042397", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100624044", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624044", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WHMPPEE", "url": "https://omabrowser.org/oma/group/WHMPPEE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287BN21", "url": "https://www.orthodb.org/?gene=A0A287BN21", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15594", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15594", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15594:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15594:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06365", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06365", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-156584", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-156584", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A287BN21", "url": "https://www.uniprot.org/uniprotkb/A0A287BN21", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BN21-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BN21-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7V6", "url": "https://www.uniprot.org/uniprotkb/I3L7V6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7V6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7V6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MWFIHCVELTSLDGPVSVRLGQFSPCCTGASLGMCAAGADEPGPEGLTSTSLLDLLLPTGLEPLDSEEPSEAVGLGAGLGAPGSGFPSEESEESRILQPPQYFWEEEEELNASSLDLGPTADYAFPDLTEKVGAVEDTSQGQEAPSAPSHLPKMSLVEPPWHVVPREEEDEEEVEEEEEEEEEEEQLLPVTTYQGEARTQAHTSPPTRSSQTAGTSEHRQDESVDQASSGVEVGSSLELSLSPPAVSQSPVTLGGQDVDGLGAGGAVLQAAGHGGELETIEEATPGATGLAGEPGEVPSVASFSQTEAPRGAEAPDRNPLPLGASASLPPAPEDMEPTLSSTPLGREGLSPQPQEGPAVETPSRTPWDSTQVICRDWSNLAGKNYIILNMTENVDCEVFRRHRGLQLLALVEEVLPRHGSGRHGDWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLGGIRRSLVEIGIQNYSTTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDSDVFEEDTHL", "length": 599, "header": "tr|I3L7V6-1|I3L7V6_PIG Isoform 1 of Podocalyxin like 2 OS=Sus scrofa OX=9823 GN=PODXL2 PE=4 SV=3 CANONICAL=I3L7V6-1" }, "isoforms": [ { "isoform_ac": "A0A287BN21-1", "url": "https://www.uniprot.org/uniprotkb/I3L7V6/entry#A0A287BN21-1", "sequence": { "sequence": "MLLLLLAGGASLGMCAAGADEPGPEGLTSTSLLDLLLPTGLEPLDSEEPSEAVGLGAGLGAPGSGFPSEESEESRILQPPQYFWEEEEELNASSLDLGPTADYAFPDLTEKVGAVEDTSQGQEAPSAPSHLPKMSLVEPPWHVVPREEEDEEEVEEEEEEEEEEEQLLPVTTYQGEARTQAHTSPPTRSSQTAGTSEHRQDESVDQASSGVEVGSSLELSLSPPAVSQSPVTLGGQDVDGLGAGGAVLQAAGHGGELETIEEATPGATGLAGEPGEVPSVASFSQTEAPRGAEAPDRNPLPLGASASLPPAPEDMEPTLSSTPLGREGLSPQPQEGPAVETPSRTPWDSTQVICRDWSNLAGKNYIILNMTENVDCEVFRRHRGLQLLALVEEVLPRHGSGRHGDWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLGGIRRSLVEIGIQNYSTTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDSDVFEEDTHL", "length": 579, "header": "tr|A0A287BN21-1|A0A287BN21_PIG Computationally mapped isoform of Podocalyxin like 2 OS=Sus scrofa OX=9823 GN=PODXL2 PE=4 SV=2 CANONICAL=I3L7V6-1" }, "locus": { "chromosome": "13", "start_pos": 72622844, "end_pos": 72579479, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052037.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052037.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000057906.2", "url": "https://www.ensembl.org/id/ENSSSCP00000057906.2" } ] } }, { "isoform_ac": "I3L7V6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7V6/entry#I3L7V6-1", "sequence": { "sequence": "MWFIHCVELTSLDGPVSVRLGQFSPCCTGASLGMCAAGADEPGPEGLTSTSLLDLLLPTGLEPLDSEEPSEAVGLGAGLGAPGSGFPSEESEESRILQPPQYFWEEEEELNASSLDLGPTADYAFPDLTEKVGAVEDTSQGQEAPSAPSHLPKMSLVEPPWHVVPREEEDEEEVEEEEEEEEEEEQLLPVTTYQGEARTQAHTSPPTRSSQTAGTSEHRQDESVDQASSGVEVGSSLELSLSPPAVSQSPVTLGGQDVDGLGAGGAVLQAAGHGGELETIEEATPGATGLAGEPGEVPSVASFSQTEAPRGAEAPDRNPLPLGASASLPPAPEDMEPTLSSTPLGREGLSPQPQEGPAVETPSRTPWDSTQVICRDWSNLAGKNYIILNMTENVDCEVFRRHRGLQLLALVEEVLPRHGSGRHGDWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLGGIRRSLVEIGIQNYSTTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDSDVFEEDTHL", "length": 599, "header": "tr|I3L7V6-1|I3L7V6_PIG Isoform 1 of Podocalyxin like 2 OS=Sus scrofa OX=9823 GN=PODXL2 PE=4 SV=3 CANONICAL=I3L7V6-1" }, "locus": { "chromosome": "13", "start_pos": 72618156, "end_pos": 72579479, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024591.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024591.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020114.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020114.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7V6", "url": "https://www.uniprot.org/uniprotkb/I3L7V6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100624044", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100624044", "resource": "KEGG Pathway" }, { "id": "R-SSC-156584", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-156584", "resource": "Reactome", "description": "Cytosolic sulfonation of small molecules" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5Y155-1", "protein_name": "Podocalyxin-like 2", "gene_name": "Podxl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARPLRAAGLPPPLLLLLAAGVSLGACAVTMDEPGPEGLTSTSLLDLLLPTDFEPLDSEEPSEAMGLGAGLAPGSGFPSEDSEESRLLQPPQYFWEEEELNGSSLDLGPTADYVFPDLTEKVASMEDPGQAPDLPNLPSILPKMDLAEPPWHMPLEEEEEEEEEEEEEEREEEEREKEEAEEEEEEELLPVSGSPGATTQAHAPSPSTSSTSSQSPGATRHRQDDSGDQATSGIEVESSVKPTLSVPSVTPSTVALGVQNYSQESGGTEWPTGGLGVQSEVPQGAGEEATVGAADYDGQQGALPSTSLPQTVPPSGTEVPGEGPLYPRTPDSFPPGPQDTESTPSSATWGQEGLSEQPLEGQTAEAHSLTPWDSTQVICKDWSNLAGKSYVILNMTENIDCLTGCWRHRCAVKGVTRVAEQQEVFRRHRGLRLLALVEEVLPRHRSGHRGDWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLSGIRRSLEEIGIQNYSTTSSCQARATQVRSDYGTLFVVLVIIGVICFIIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGAINGPSSWSALMGSKRDPEDSDVFEEDTHL", "length": 624 }, "evidence": [ { "id": "I3L7V6", "url": "https://omabrowser.org/oma/group/I3L7V6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CAE9-1", "protein_name": "Podocalyxin-like protein 2", "gene_name": "Podxl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MARPLRAARLPPPLLLLLAAGASLGAYAVGVDEPGPEGLTSTSLLDLLLPTDFEPLDSEEPSEAMGLDAGLAPGSGFPSEDSEESRLLQPPQYFWEEEELNGSSLDLGPTADYVFPDLTEKVASMEDPGQAPDLPNLPSILPKMDLAEPPWHMPLQEEEEEEEEEEEEREEEEREKEAEEEEEEEELLPVSGSPGATAQAHAPSPSTSSSTSSQSPGATRHRQEDSGDQATSGMEVESSVKPTLSVPSVTPSTVAPGVQNYSQESGGTEWPTGGLGVQSEVPQGAGEGATVGAADFDGQQGALPSSSLPQTVPPSGTEVPSEGPLYPRIPDSLPPGPQDTESTPSSATWGQEGLSEQPLEGQAAEAHSLTPWDSTQVICKDWSNLAGKSYIILNMTQNIDCEVFRRHRGLRLLALVEEVLPRHRSGHRGDWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLSGIRRSLEEIGIQNYSTTSSCQARATQVRSDYGTLFVVLVIIGVICFIIIVLGLLYNCWQRRMPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGAINGPSSWSALMGSKRDPEDSDVFEEDTHL", "length": 603 }, "evidence": [ { "id": "I3L7V6", "url": "https://omabrowser.org/oma/group/I3L7V6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NZ53-1", "protein_name": "Podocalyxin-like protein 2", "gene_name": "PODXL2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGRLLRAARLPPLLSPLLLLLVGGAFLGACVAGSDEPGPEGLTSTSLLDLLLPTGLEPLDSEEPSETMGLGAGLGAPGSGFPSEENEESRILQPPQYFWEEEEELNDSSLDLGPTADYVFPDLTEKAGSIEDTSQAQELPNLPSPLPKMNLVEPPWHMPPREEEEEEEEEEEREKEEVEKQEEEEEEELLPVNGSQEEAKPQVRDFSLTSSSQTPGATKSRHEDSGDQASSGVEVESSMGPSLLLPSVTPTTVTPGDQDSTSQEAEATVLPAAGLGVEFEAPQEASEEATAGAAGLSGQHEEVPALPSFPQTTAPSGAEHPDEDPLGSRTSASSPLAPGDMELTPSSATLGQEDLNQQLLEGQAAEAQSRIPWDSTQVICKDWSNLAGKNYIILNMTENIDCEVFRQHRGPQLLALVEEVLPRHGSGHHGAWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLGDIRRSLEEIGIQNYSTTSSCQARASQVRSDYGTLFVVLVVIGAICIIIIALGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKHPSLNGGGALNGPGSWGALMGGKRDPEDSDVFEEDTHL", "length": 605 }, "evidence": [ { "id": "I3L7V6", "url": "https://omabrowser.org/oma/group/I3L7V6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { 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"https://alphafold.ebi.ac.uk/entry/I3L7X7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024950", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024950", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00586", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00586", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR006683", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006683", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029069", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029069", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050563", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050563", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR31793", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31793", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31793:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31793:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03061", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03061", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L7X7", "url": "https://www.uniprot.org/uniprotkb/I3L7X7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7X7-1", "url": "https://www.uniprot.org/uniprotkb/I3L7X7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTSWVPRLLPRNVRSLAASSENQRVEDGRRHQEAYGYFLPIQTRWQDNDQYGHVNNAVYYSYFDTIINHYLIRYCGLKTGLRTSPTVGFMVTNQCTFHTPVGFPQIPVAALAVDKVGRSSVHYRLALFPPKPAGDLPAVEHRDFSDGFFFGHPRLAQFAALACTTGSAVHVFVNPATGKPTGLPEDFRPGLLRLVTQLPRNHSQTP", "length": 206, "header": "tr|I3L7X7-1|I3L7X7_PIG Isoform 1 of Thioesterase domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=I3L7X7-1" }, "isoforms": [ { "isoform_ac": "I3L7X7-1", "url": "https://www.uniprot.org/uniprotkb/I3L7X7/entry#I3L7X7-1", "sequence": { "sequence": "MTSWVPRLLPRNVRSLAASSENQRVEDGRRHQEAYGYFLPIQTRWQDNDQYGHVNNAVYYSYFDTIINHYLIRYCGLKTGLRTSPTVGFMVTNQCTFHTPVGFPQIPVAALAVDKVGRSSVHYRLALFPPKPAGDLPAVEHRDFSDGFFFGHPRLAQFAALACTTGSAVHVFVNPATGKPTGLPEDFRPGLLRLVTQLPRNHSQTP", "length": 206, "header": "tr|I3L7X7-1|I3L7X7_PIG Isoform 1 of Thioesterase domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=I3L7X7-1" }, "locus": { "chromosome": "2", "start_pos": 28705894, "end_pos": 28590136, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030193.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030193.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020135.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020135.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7X7", "url": "https://www.uniprot.org/uniprotkb/I3L7X7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "fatty acyl-CoA hydrolase 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transcribed by both RNA polymerases II and III. Specifically recognizes and binds the Staf-binding site (SBS), a consensus DNA-binding motif present in many promoters. Able to activate expression of small nuclear RNA (snRNA) transcribed by RNA polymerases II and III. 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"Protein Classification" ] }, { "id": "ssc:106504047", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106504047", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3L7Y8", "url": "https://www.orthodb.org/?gene=I3L7Y8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR19818", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19818", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR19818:SF151", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR19818:SF151", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24408", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24408", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24408:SF58", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24408:SF58", "database": "PANTHER", "categories": [ "Protein 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"MESLGLQTVTLSDGTMAYVQQAVKGEKLLEGQVIQLEDGTTAYIHQVTVQKEPLSFEDGQAVQLEDGSMAYIHRTPREGCDPSALEAVQLEDGSTAYIHHPVAMPTDSTILAVQTEVGLEDLAAEDDEGFSADTVVALEQYASKVLHDSQAPHNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAASAAEESPPPKRPRIAYLSEVKEEDDDTPAQVAMVTEEDGAPRVALITQDGAQQVSLSPEDLQALGSAISMVTQHGSTTLTIPSHDDDLTTSGTHTVTMVSADGTQTQPVTIITSGTVVAEDSSVASLHHQQVALLATANGTHIAVQLEEQQTLEEAISVATAAMQQGAVTLEPTESESGC", "length": 570, "header": "tr|I3L7Y8-1|I3L7Y8_PIG Isoform 1 of Zinc finger protein 76 OS=Sus scrofa OX=9823 GN=ZNF76 PE=3 SV=2 CANONICAL=I3L7Y8-1" }, "isoforms": [ { "isoform_ac": "A0A5K1UYD2-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8/entry#A0A5K1UYD2-1", "sequence": { "sequence": "MESLGLQTVTLSDGTMAYVQQAVKGEKLLEGQVIQLEDGTTAYIHQVTVQKEPLSFEDGQAVQLEDGSMAYIHRTPREGCDPSALEAVQLEDGSTAYIHHPVAMPTDSTILAVQTEVGLEDLAAEDDEGFSADTVVALEQYASKVLHDSQAPHNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAASAAEESPPPKRPRIAYLSEVKEEDDDTPAQVAMVTEEDGAPRVALITQDGAQQVTIITSGTVVAEDSSVASLHHQQVALLATANGTHIAVQLEEQQTLEEAISVATAAMQQGAVTLEPTESESGC", "length": 515, "header": "tr|A0A5K1UYD2-1|A0A5K1UYD2_PIG Computationally mapped isoform of Zinc finger protein 76 OS=Sus scrofa OX=9823 GN=ZNF76 PE=3 SV=1 CANONICAL=I3L7Y8-1" }, "locus": { "chromosome": "7", "start_pos": 31191571, "end_pos": 31179860, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000035214.4", "url": "https://www.ensembl.org/id/ENSSSCT00000035214.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000029438.3", "url": "https://www.ensembl.org/id/ENSSSCP00000029438.3" } ] } }, { "isoform_ac": "I3L7Y8-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8/entry#I3L7Y8-1", "sequence": { "sequence": "MESLGLQTVTLSDGTMAYVQQAVKGEKLLEGQVIQLEDGTTAYIHQVTVQKEPLSFEDGQAVQLEDGSMAYIHRTPREGCDPSALEAVQLEDGSTAYIHHPVAMPTDSTILAVQTEVGLEDLAAEDDEGFSADTVVALEQYASKVLHDSQAPHNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFRCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAASAAEESPPPKRPRIAYLSEVKEEDDDTPAQVAMVTEEDGAPRVALITQDGAQQVSLSPEDLQALGSAISMVTQHGSTTLTIPSHDDDLTTSGTHTVTMVSADGTQTQPVTIITSGTVVAEDSSVASLHHQQVALLATANGTHIAVQLEEQQTLEEAISVATAAMQQGAVTLEPTESESGC", "length": 570, "header": "tr|I3L7Y8-1|I3L7Y8_PIG Isoform 1 of Zinc finger protein 76 OS=Sus scrofa OX=9823 GN=ZNF76 PE=3 SV=2 CANONICAL=I3L7Y8-1" }, "locus": { "chromosome": "7", "start_pos": 31191571, "end_pos": 31179860, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000057832.3", "url": "https://www.ensembl.org/id/ENSSSCT00000057832.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000054735.2", "url": "https://www.ensembl.org/id/ENSSSCP00000054735.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7Y8", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:106504047", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:106504047", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L7Y8", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8" } ], "pmid": "" }, { "name": "chromatin", "id": "GO:0000785", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000785", "evidence": [ { "database": "UniProtKB", "id": "I3L7Y8", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3L7Y8", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3L7Y8", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 6, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L7Y8", "url": "https://www.uniprot.org/uniprotkb/I3L7Y8" } ], "pmid": "" }, { "name": "DNA-binding transcription repressor activity, RNA polymerase II-specific", "id": "GO:0001227", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001227", "evidence": [ { "database": 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"url": "https://www.ebi.ac.uk/interpro/entry/IPR009003", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR018114", "url": "https://www.ebi.ac.uk/interpro/entry/IPR018114", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051487", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051487", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24256", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24256", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00089", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00089", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A8W4FMY6", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMY6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FMY6-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FMY6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7Z2", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7Z2-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNKGEGEGKNPGLMDCNKPWRGCLVPISQISCKNVKGKLVEVGKWPWQVSILFLGMNICSGSLIHHQWVVTAAHCLERSPESLQDSTFDLIAGDLPPTHGPLSVTRVRIHEDFINLISQDIALLKLKDPISWSPLIQPVCLPSPKLKPSLGSMCWVIGWGQTDTQVTSKPSYRLQEVAVRIVNNKICNEQYKFLFLKDQKKLIGSDMICASAQWGTDTCQVNSGGSLVCQVNKTWIQMGVMSWSFICRQRRLPGIYTSISHFTDWIKRQVNDVRFVSGARPAFLSPVFLTGYILLVSLGSLWLL", "length": 304, "header": "tr|I3L7Z2-1|I3L7Z2_PIG Isoform 1 of tryptase OS=Sus scrofa OX=9823 GN= PE=3 SV=4 CANONICAL=I3L7Z2-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FMY6-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2/entry#A0A8W4FMY6-1", "sequence": { "sequence": "CACGSRSWFQACGQSQISCKNVKGKLVEVGKWPWQVSILFLGMNICSGSLIHHQWVVTAAHCLERSKDPRSYSVKMGIQQLSENGTELSVTRVRIHEDFINLISQDIALLKLKDPISWSPLIQPVCLPSPKLKPSLGSMCWVIGWGQTDTQGKRVPRCRLQEVAVRIVNNKICNEQYKFLFLKDQKKLIGSDMICASAQWGTDTCQSNSGGSLVCQVNKTWIQMGVMSWSFICRQRRLPGIYTSISHFTDWIKRQVNDVRFVSGARPAFLSPVFLTGYILLVSLGSLWLL", "length": 290, "header": "tr|A0A8W4FMY6-1|A0A8W4FMY6_PIG Computationally mapped isoform of tryptase OS=Sus scrofa OX=9823 GN= PE=3 SV=1 CANONICAL=I3L7Z2-1" }, "locus": { "chromosome": "13", "start_pos": 29663904, "end_pos": 29640804, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093363.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093363.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079675.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079675.1" } ] } }, { "isoform_ac": "I3L7Z2-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2/entry#I3L7Z2-1", "sequence": { "sequence": "MNKGEGEGKNPGLMDCNKPWRGCLVPISQISCKNVKGKLVEVGKWPWQVSILFLGMNICSGSLIHHQWVVTAAHCLERSPESLQDSTFDLIAGDLPPTHGPLSVTRVRIHEDFINLISQDIALLKLKDPISWSPLIQPVCLPSPKLKPSLGSMCWVIGWGQTDTQVTSKPSYRLQEVAVRIVNNKICNEQYKFLFLKDQKKLIGSDMICASAQWGTDTCQVNSGGSLVCQVNKTWIQMGVMSWSFICRQRRLPGIYTSISHFTDWIKRQVNDVRFVSGARPAFLSPVFLTGYILLVSLGSLWLL", "length": 304, "header": "tr|I3L7Z2-1|I3L7Z2_PIG Isoform 1 of tryptase OS=Sus scrofa OX=9823 GN= PE=3 SV=4 CANONICAL=I3L7Z2-1" }, "locus": { "chromosome": "13", "start_pos": 29664068, "end_pos": 29640804, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030287.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030287.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020150.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020150.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z2", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "serine-type endopeptidase activity", "id": "GO:0004252", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004252", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z2", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z2", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "proteolysis", "id": "GO:0006508", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006508", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z2", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 232, "end_pos": 234, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L7Z2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 304, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L7Z2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L7Z2" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L7Z2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7Z2" }, { "id": "PS50240", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50240" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Peptidase S1", "eco_id": "ECO_0000259", "start_pos": 34, "end_pos": 271, "start_aa": "Asn", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 232, "end_pos": 234 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L7Z3-1", "uniprot_ac": "I3L7Z3", "uniprot_id": "I3L7Z3_PIG", "mass": { "chemical_mass": 66753.0, "monoisotopic_mass": 66753.0 }, "refseq": { "ac": "XP_020944672", "name": "nudC domain-containing protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944672" }, "gene_names": [ { "name": "NUDCD1", "type": "recommended", "evidence": [ { "id": "I3L7Z3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" } ] }, { "name": "NUDCD1", "type": "synonym", "evidence": [ { "id": "XP_020944672", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944672" } ] } ], "protein_names": [ { "name": "NudC domain-containing protein 1", "type": "recommended", "evidence": [ { "id": "I3L7Z3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3/entry#names_and_taxonomy" } ] }, { "name": "nudC domain-containing protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_020944672", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944672" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L7Z3", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NUDCD1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3", "locus": { "chromosome": "4", "start_pos": 28331531, "end_pos": 28203743, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006029", "url": "https://www.ensembl.org/id/ENSSSCG00000006029" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006029", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006029", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100153430", "url": "https://www.ncbi.nlm.nih.gov/gene/100153430", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008978", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008978", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR037895", "url": "https://www.ebi.ac.uk/interpro/entry/IPR037895", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100153430", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153430", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "DTRFVHH", "url": "https://omabrowser.org/oma/group/DTRFVHH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L7Z3", "url": "https://www.orthodb.org/?gene=I3L7Z3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR21664", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21664", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21664:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21664:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04969", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04969", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020944672", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020944672", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2R6H0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6H0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R6H0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R6H0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDC8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FDC8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FDC8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1G5", "url": "https://www.uniprot.org/uniprotkb/F1S1G5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S1G5-1", "url": "https://www.uniprot.org/uniprotkb/F1S1G5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7Z3", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L7Z3-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYPDSVYYIDNLGRIMNLTVMLDTALGKPREVFRLPTDLTACDNRLCASIHFTSSTWVALSDGTGRLYLIGTGERGNSASEKWEIMFNEELGNPFIIIHSISLLKDEEHSIATLLLRIEKEELDMKGSGFYVSLEWITISKKSKDNKKYEITKRDILRGKSVPHYAAFEPDGNGLMIVSYKSFTFVQLGQDLEESQDENMSEKIKAPLYYWQQTEDDLTVTIQLPEDSTKEDIQVQFLPDHVNIVLKGQRFLEGNLYSSIDHESSTWIIKENNSLEICLIKKNEGLTWPELVVGDKQGEFIRDSAQYAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRFDGSTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSGTQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPTPMSTVLYNRKEGRQVGQVAKQQVASLETNDPILGFQATNERLFVLTTKNLFLIKVNTEN", "length": 583, "header": "tr|I3L7Z3-1|I3L7Z3_PIG Isoform 1 of NudC domain-containing protein 1 OS=Sus scrofa OX=9823 GN=NUDCD1 PE=1 SV=2 CANONICAL=I3L7Z3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2R6H0-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3/entry#A0A5G2R6H0-1", "sequence": { "sequence": "MDVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYPDSVYYIDNLGRIMNLTVMLDTALGKPREVFRLPTDLTACDNRLCASIHFTSSTWVALSDGTGRLYLIGTGERGNSASEKWEIMFNEELGNPFIIIHSISLLKDEEHSIATLLLRIEKEELDMKGSGFYVSLEWITISKKSKDNKKYEITKRDILRGKSVPHYAAFEPDGNGLMIVSYKSFTFVQLGQDLEESQDENMSEKIKAPLYYWQQTEDDLTVTIQLPEDSTKEDIQVQFLPDHVNIVLKGQRFLEGNLYSSIDHESSTWIIKENNSLEICLIKKNEGLTWPELVVGDKQGEFIRDSAQYAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRFDGSTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSGTQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPTPMSTVLYNRKEGRQVGQVAKQQVASLETNDPIFLL", "length": 559, "header": "tr|A0A5G2R6H0-1|A0A5G2R6H0_PIG Computationally mapped isoform of NudC domain-containing protein 1 OS=Sus scrofa OX=9823 GN=NUDCD1 PE=1 SV=2 CANONICAL=I3L7Z3-1" }, "locus": { "chromosome": "4", "start_pos": 28330128, "end_pos": 28203854, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073340.2", "url": "https://www.ensembl.org/id/ENSSSCT00000073340.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072674.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072674.2" } ] } }, { "isoform_ac": "A0A8W4FDC8-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3/entry#A0A8W4FDC8-1", "sequence": { "sequence": "MDVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYPDSVYYIDNLGRIMNLTVMLDTALGKPREVFRLPTDLTACDNRLCASIHFTSSTWVALSDGTGRLYLIGTGERGNSASEKWEIMFNEELGNPFIIIHSISLLKDEEHSIATLLLRIEKEELDMKGSGFYVSLEWITISKKSKDNKKYEITKRDILRGKSVPHYAAFEPDGNGLMIVSYKSFTFVQLGQDLEESQDENMSEKIKAPLYYWQQTEDDLTVTIQLPEDSTKEDIQVQFLPDHVNIVLKGQRFLEGNLYSSIDHESSTWIIKENNSLEICLIKKNEGLTWPELVVGDKQGEFIRDSAQYAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRFDGSTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSGTQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPTPMSTVLYNRKEGRQVGQVAKQQVASLETNDPILGYYKYIQEIMNL", "length": 569, "header": "tr|A0A8W4FDC8-1|A0A8W4FDC8_PIG Computationally mapped isoform of NudC domain-containing protein 1 OS=Sus scrofa OX=9823 GN=NUDCD1 PE=1 SV=1 CANONICAL=I3L7Z3-1" }, "locus": { "chromosome": "4", "start_pos": 28318054, "end_pos": 28203854, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000100658.1", "url": "https://www.ensembl.org/id/ENSSSCT00000100658.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077323.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077323.1" } ] } }, { "isoform_ac": "F1S1G5-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3/entry#F1S1G5-1", "sequence": { "sequence": "MDVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYPDSVYYIDNLGRIMNLTVMLDTALGKPREVFRLPTDLTACDNRLCASIHFTSSTWVALSDGTGRLYLIGTGERGNSASEKWEIMFNEELGNPFIIIHSISLLKDEEHSIATLLLRIEKEELDMKGSGFYVSLEWITISKKSKDNKKYEITKRDILRGKSVPHYAAFEPDGNGLMIVSYKSFTFVQLGQDLEESQDENMSEKIKAPLYYWQQTEDDLTVTIQLPEDSTKEDIQVQFLPDHVNIVLKGQRFLEGNLYSSIDHESSTWIIKENNSLEICLIKKNEGLTWPELVVGDKQGEFIRDSAQYAAIAERLMHLTSEELVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSGTQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPTPMSTVLYNRKEGRQVGQVAKQQVASLETNDPILGFQATNERLFVLTTKNLFLIKVNTEN", "length": 541, "header": "tr|F1S1G5-1|F1S1G5_PIG Computationally mapped isoform of NudC domain-containing protein 1 OS=Sus scrofa OX=9823 GN=NUDCD1 PE=1 SV=3 CANONICAL=I3L7Z3-1" }, "locus": { "chromosome": "4", "start_pos": 28317884, "end_pos": 28203854, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000006617.3", "url": "https://www.ensembl.org/id/ENSSSCT00000006617.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006441.3", "url": "https://www.ensembl.org/id/ENSSSCP00000006441.3" } ] } }, { "isoform_ac": "I3L7Z3-1", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3/entry#I3L7Z3-1", "sequence": { "sequence": "MDVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYPDSVYYIDNLGRIMNLTVMLDTALGKPREVFRLPTDLTACDNRLCASIHFTSSTWVALSDGTGRLYLIGTGERGNSASEKWEIMFNEELGNPFIIIHSISLLKDEEHSIATLLLRIEKEELDMKGSGFYVSLEWITISKKSKDNKKYEITKRDILRGKSVPHYAAFEPDGNGLMIVSYKSFTFVQLGQDLEESQDENMSEKIKAPLYYWQQTEDDLTVTIQLPEDSTKEDIQVQFLPDHVNIVLKGQRFLEGNLYSSIDHESSTWIIKENNSLEICLIKKNEGLTWPELVVGDKQGEFIRDSAQYAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRFDGSTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSGTQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPTPMSTVLYNRKEGRQVGQVAKQQVASLETNDPILGFQATNERLFVLTTKNLFLIKVNTEN", "length": 583, "header": "tr|I3L7Z3-1|I3L7Z3_PIG Isoform 1 of NudC domain-containing protein 1 OS=Sus scrofa OX=9823 GN=NUDCD1 PE=1 SV=2 CANONICAL=I3L7Z3-1" }, "locus": { "chromosome": "4", "start_pos": 28317884, "end_pos": 28203854, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030070.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030070.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020151.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020151.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z3", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100153430", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100153430", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AGF4-1", "protein_name": "NudC domain-containing protein 1", "gene_name": "Nudcd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDAWYQDSVYYIDNLGRIMNLTVMLDTALGKPREVFRLPTDVTACDNRLCASLHFTSPSWVTLSDGTGRLYVIGTGDRGHSPEKWEIMFNEELGNPFIIIHSISLLKAEEHSVAILLLRIEKEELDMKGSGFYVSLEWVIVSKKKEDSKKYEITKHHVLRGKSVPHYAAIEPNGNGLMIASYKSFKVVSVDQDLEESMDRPEKIKVEPLYYWQQTEDDLTVTVRLPEGSTKDDIQIQFLPDNINIKLKDIQVVEGKLYSSIDHEGSTWTIKENDGLEISLIKKNEGLMWPELVVGDKQGELIRDPAQCAAIAERLMHLTSDELNPNPDKEKPPCNAQELEECDIFFEESSSLCRFDGNTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHCSQQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPTPMSTVLYNRKEGRHVGQVAKQQVTSLETNDPILGFQATNERLFVLTTKNLFLIKVNTEN", "length": 580 }, "evidence": [ { "id": "I3L7Z3", "url": "https://omabrowser.org/oma/group/I3L7Z3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6PIP5-1", "protein_name": "NudC domain-containing protein 1", "gene_name": "Nudcd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDAWYQDSVYYIDNLGRIMNLTVMLDTALGKPREVFRLPTDVTAYDNRLCASIHFTSPSWVTLSDGTGRLYVIGTGDRGNSPEKWEIMFNEELGNPFIIIHSISLLKAEEHSVAILLLRIEKEELDLKGSGFYVSLEWVVVTKKKEDSKKYEITKHHVLRGKSVPHYAAIEPNGNGLMIVSYKSFKVISGDQDLEENMDEDRPEKIKVEPLYYWQQSEDDLTVTVRLPESSTKEDIQIQFLPDNINIKLKDIQVLEGKLYSSIDHEGSTWTIKENDSLEISLIKKNEGLMWPELVVGDKQGELLRDPAQCAAIAERLMHLTSDELNPNPDKEKPACNAQELEECDIFFEESSSLCRFDGNTLQTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHCSKQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPTPMSTVLYNRKEGRHVGQVAKQQVASLETNDPILGFQATNERLFVLTTKNLFLIRVNTEN", "length": 582 }, "evidence": [ { "id": "I3L7Z3", "url": "https://omabrowser.org/oma/group/I3L7Z3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96RS6-1", "protein_name": "NudC domain-containing protein 1", "gene_name": "NUDCD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEVAANCSLRVKRPLLDPRFEGYKLSLEPLPCYQLELDAAVAEVKLRDDQYTLEHMHAFGMYNYLHCDSWYQDSVYYIDTLGRIMNLTVMLDTALGKPREVFRLPTDLTACDNRLCASIHFSSSTWVTLSDGTGRLYVIGTGERGNSASEKWEIMFNEELGDPFIIIHSISLLNAEEHSIATLLLRIEKEELDMKGSGFYVSLEWVTISKKNQDNKKYEIIKRDILRGKSVPHYAAIEPDGNGLMIVSYKSLTFVQAGQDLEENMDEDISEKIKEPLYYWQQTEDDLTVTIRLPEDSTKEDIQIQFLPDHINIVLKDHQFLEGKLYSSIDHESSTWIIKESNSLEISLIKKNEGLTWPELVIGDKQGELIRDSAQCAAIAERLMHLTSEELNPNPDKEKPPCNAQELEECDIFFEESSSLCRFDGNTLKTTHVVNLGSNQYLFSVIVDPKEMPCFCLRHDVDALLWQPHSSKQDDMWEHIATFNALGYVQASKRDKKFFACAPNYSYAALCECLRRVFIYRQPAPMSTVLYNRKEGRQVGQVAKQQVASLETNDPILGFQATNERLFVLTTKNLFLIKVNTEN", "length": 583 }, "evidence": [ { "id": "I3L7Z3", "url": "https://omabrowser.org/oma/group/I3L7Z3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9VYT5-1", "protein_name": "NudC domain-containing protein 1", "gene_name": "HSP20", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MPVVELKVDRNLVCSDFSGYKLAFDSVPVLRQELGCDAYVLDPSSNQFSLLHTELFARHNHLVADPWMRHCSYFFNKRHQLVQCNYDLQTGRARAQRVVLTVDYRDQGDGELHRSGDYNYTIVFVSERFCVICDGITSYHLVDTGDRTRTDVQEWQRITRSPVNNNSGHRGFALFDARLDVLQERKQISLVAGHVARRDAVGQDQTHVYYMDLTWARWTHSPTNDEWSYNICQRLETTGSVHYCAFEPRAESLVIASNRDVQTPEERRAADEAAAARLNSSGDHDGQLENGGPPSYSWSQTDNNVLIRFNVPSTASAKEFNVSGSKTTVVVKHLDEVIFDEELYASVGDDLSAFKLAENGLELSLTKAEIQNWPRLFAQKKDDVAEEVHPMEAPPLPIPSLQDPVEECDLISADEEMKMVRFNLTSGCITHTIFLGPPPLVLTTTLRPGFPAAFATRQGVDASIWLQMYQPSRPDEWSVRHEGQLHAFGYVQASKVVRKFTVCSPDLDYVAICDPVRYVLVYFPANNSADGLRRRNGPPVTLGKQKLITLGNEIDEILGITTANNLITVLSKKELIHLQV", "length": 580 }, "evidence": [ { "id": "I3L7Z3", "url": "https://omabrowser.org/oma/group/I3L7Z3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleoplasm", "id": "GO:0005654", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005654", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z3", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z3", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" } ], "pmid": "" }, { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z3", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3L7Z3", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 268, "end_pos": 270, "annotation": "n_glycosylation_sequon" }, { "start_pos": 341, "end_pos": 343, "annotation": "n_glycosylation_sequon" }, { "start_pos": 504, "end_pos": 506, "annotation": "n_glycosylation_sequon" }, { "start_pos": 6, "end_pos": 8, "annotation": "n_glycosylation_sequon" }, { "start_pos": 86, "end_pos": 88, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L7Z3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L7Z3" }, { "id": "PS51203", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51203" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "CS", "eco_id": "ECO_0000259", "start_pos": 273, "end_pos": 361, "start_aa": "Ile", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 268, "end_pos": 270 }, { "start_pos": 341, "end_pos": 343 }, { "start_pos": 504, "end_pos": 506 }, { "start_pos": 6, "end_pos": 8 }, { "start_pos": 86, "end_pos": 88 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"https://www.uniprot.org/uniprotkb/I3L816/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L816", "url": "https://www.uniprot.org/uniprotkb/I3L816" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "HNRNPH1", "url": "https://www.uniprot.org/uniprotkb/I3L816", "locus": { "chromosome": "2", "start_pos": 78969949, "end_pos": 78963309, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000014022", "url": "https://www.ensembl.org/id/ENSSSCG00000014022" } ] } } ], "crossref": [ { "id": "I3L816", "url": "https://alphafold.ebi.ac.uk/entry/I3L816", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000014022", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000014022", "database": "Bgee", 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"categories": [ "Gene Expression" ] }, { "id": "cd17374", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd17374", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100737875", "url": "https://www.ncbi.nlm.nih.gov/gene/100737875", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR011701", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011701", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100737875", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100737875", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MMIICQI", "url": "https://omabrowser.org/oma/group/MMIICQI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L854", "url": "https://www.orthodb.org/?gene=I3L854", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24064", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24064", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07690", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07690", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003480736", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480736", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L854", "url": "https://www.uniprot.org/uniprotkb/I3L854", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L854-1", "url": "https://www.uniprot.org/uniprotkb/I3L854-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAFEELLNEVGGLGKFQILQMLLAFPPLMMVVCHILLENFTAAIPGHHCWVRILDNDTDSGNDTGTLGPEVLLRISIPLDSNLKPEKCRRYLHPQWQLLHLNGTFPNVTDLDTEPCVDGWVYDQSSFSHTIVTEWDLVCDYQSQKPLVQFAFMAGMLLGGFLYGYLSDRFGRKLILRWCLLQLAISGTCAAFAPNFLVYCFLRFWSGCSAVAILSNNSMIVVEWTRAQSKAMVISVITCATGIGQIILGGLAFVFREWRTLQLVVSVPFFVFFLSTWCLVESARWLIITNKPAKGLKELKKVAHRNGLKNAEATLNMEGLRETMKEELEVAQTNTTLLDLFRTPKLRKRMCLLAFVRFANTMPFYGIFINLQHFGNNIFLFQVIFGVLSTLARSLLFIVMNHMDRRPTQMLFMFLVGISILANTFVPQDMQILRVTLGSLGIGFIAASITSYSVHSFELIPTLLRAKASGLELMVSRFGAALAPLLMTLVVYQPILPWIIYGVSPIIAGLVVFFQPETKNLPLPDTIQDVENHKNFLRKVNEKEAYIKVTKL", "length": 552, "header": "tr|I3L854-1|I3L854_PIG Isoform 1 of Major facilitator superfamily (MFS) profile domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100737875 PE=4 SV=2 CANONICAL=I3L854-1" }, "isoforms": [ { "isoform_ac": "I3L854-1", "url": "https://www.uniprot.org/uniprotkb/I3L854/entry#I3L854-1", "sequence": { "sequence": "MAFEELLNEVGGLGKFQILQMLLAFPPLMMVVCHILLENFTAAIPGHHCWVRILDNDTDSGNDTGTLGPEVLLRISIPLDSNLKPEKCRRYLHPQWQLLHLNGTFPNVTDLDTEPCVDGWVYDQSSFSHTIVTEWDLVCDYQSQKPLVQFAFMAGMLLGGFLYGYLSDRFGRKLILRWCLLQLAISGTCAAFAPNFLVYCFLRFWSGCSAVAILSNNSMIVVEWTRAQSKAMVISVITCATGIGQIILGGLAFVFREWRTLQLVVSVPFFVFFLSTWCLVESARWLIITNKPAKGLKELKKVAHRNGLKNAEATLNMEGLRETMKEELEVAQTNTTLLDLFRTPKLRKRMCLLAFVRFANTMPFYGIFINLQHFGNNIFLFQVIFGVLSTLARSLLFIVMNHMDRRPTQMLFMFLVGISILANTFVPQDMQILRVTLGSLGIGFIAASITSYSVHSFELIPTLLRAKASGLELMVSRFGAALAPLLMTLVVYQPILPWIIYGVSPIIAGLVVFFQPETKNLPLPDTIQDVENHKNFLRKVNEKEAYIKVTKL", "length": 552, "header": "tr|I3L854-1|I3L854_PIG Isoform 1 of Major facilitator superfamily (MFS) profile domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100737875 PE=4 SV=2 CANONICAL=I3L854-1" }, "locus": { "chromosome": "2", "start_pos": 8750667, "end_pos": 8734149, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024497.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024497.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020212.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020212.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L854", "url": "https://www.uniprot.org/uniprotkb/I3L854" } ], "reference": [ { "type": "PubMed", 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"MKGKLFSFEARIEVILTLLEDCLCPMAFEELLDEVGGLGKFQILQMALILPSLMIIVCQILLENFTAAIPRHRCWVHILDNDTVSDNDTGFLSPDVLLRISIPLDSNLKPEKCHRFLHPQWQLLHLNGTFPNMTDLDTEPCVDGWVYDHSLFSSTIVTEWDLICDHQSQKPVAQSLFMAGMLVGGFIYGHLSDRFGRKLILRCCLLQLAISGTCAAFAPTFLIYCSIRFWSGCSAVVIVANNIMLIIEWTRSQSKAMILTLVACTFSMGQMMLGGLAFVFREWRTLQLVVSVPFFVFFLSSRWLVESARWLIITNKPDEGLKELKKVAHRNGMKNAEATLNMEGLRVTMQEELKTAQMKTTVFDLFRTPKLRKRICLLFFVRFGTTIPFFGIFINLQHFGSNIFLFQVIFGALTGLTRCLIPPVLNHMGRRPTQTLFMFLVGLSILVNTFVPQEMQTVRVTLASVGMGCVAASNTSISVHFVELLPTLVRARAAGIDMMASRCGAALAPLLMTLVVYLPTLPWIIYGVCPIIASLLVLLQPETRHLPLPDTIQDVENKKQFSRKVNEEDFCIKVTKF", "length": 577 }, "evidence": [ { "id": "I3L854", "url": "https://omabrowser.org/oma/group/I3L854/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "basolateral plasma membrane", "id": "GO:0016323", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016323", "evidence": [ { "database": 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"evidence": [ { "id": "I3L880", "url": "https://omabrowser.org/oma/group/I3L880/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O82623-1", "protein_name": "DNAJ heat shock N-terminal domain-containing protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MLVGENCVHETYYEILSVKEDASYEEIRNSYRSAILHSHPDKLNNTSRSSSDDEKFLKIQKAWEVLSDAELRVVYDNDLRSSRHDGITADEISIEDMSVEITGDVIDLFYQCRCGDYFCVDSSELGTMGFALLRDGDFVYVKRLGAFVASVVLPCGSCSLKTRVWVDSDMKIPI", "length": 174 }, "evidence": [ { "id": "I3L880", "url": "https://omabrowser.org/oma/group/I3L880/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q54CI5-1", "protein_name": "DPH4 homolog", "gene_name": "dph4", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": 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"go_terms": [ { "name": "ferrous iron binding", "id": "GO:0008198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008198", "evidence": [ { "database": "UniProtKB", "id": "I3L880", "url": "https://www.uniprot.org/uniprotkb/I3L880" } ], "pmid": "" }, { "name": "ATPase activator activity", "id": "GO:0001671", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001671", "evidence": [ { "database": "UniProtKB", "id": "I3L880", "url": "https://www.uniprot.org/uniprotkb/I3L880" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L880", "url": "https://www.uniprot.org/uniprotkb/I3L880" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "protein histidyl modification to diphthamide", "id": "GO:0017183", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0017183", "evidence": [ { "database": "UniProtKB", "id": "I3L880", "url": "https://www.uniprot.org/uniprotkb/I3L880" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L880", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L880" }, { "id": "PS51074", "database": "PROSITE", "url": "https://prosite.expasy.org/PS51074" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DPH-type MB", "eco_id": "ECO_0000259", "start_pos": 93, "end_pos": 148, "start_aa": "Val", "end_aa": "Cys", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L880", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L880" }, { "id": "PS50076", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50076" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "J", "eco_id": "ECO_0000259", "start_pos": 11, "end_pos": 82, "start_aa": "Asp", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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Classification" ] }, { "id": "ssc:100621911", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621911", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MIGGPGQ", "url": "https://omabrowser.org/oma/group/MIGGPGQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L8B2", "url": "https://www.orthodb.org/?gene=I3L8B2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24023", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24023", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24023:SF1112", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24023:SF1112", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37456", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37456", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37456:SF6", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37456:SF6", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01391", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01391", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-1650814", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1650814", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-186797", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-186797", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-2022090", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2022090", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-216083", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-216083", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-3000178", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-3000178", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8948216", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8948216", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_003356382", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356382", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QVP2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVP2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QVP2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QVP2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8B2", "url": "https://www.uniprot.org/uniprotkb/I3L8B2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8B2-1", "url": "https://www.uniprot.org/uniprotkb/I3L8B2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAPAAAPRNLLILLQVLGLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDKGPPGKAGPPGPKGEPGKPGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGITGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGVKGPPGLQGVKGHPGKRGLLGDAGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPGMAGPKGEMGPQGYKGMVGSVGAAGSPGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGATGPPGIDGKDGTPGTPGMKGSAGQAGRPGNPGHQGLAGMPGQPGTKGGPGDKGEPGQRGFPGVSGPPGKEGEPGPQGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLVGDRGLPGLPGRQGVAGRDASDQHIEDVMLKMMQEQLAEMAVSAKREALGATGMVGPPGPPGPPGYPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKRGEKGDRGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGAPGAPGEAGRPGLPGPMGLPGFCEPAACLGASAYASARLTEPGSIKGP", "length": 688, "header": "tr|I3L8B2-1|I3L8B2_PIG Isoform 1 of Collagen type IX alpha 2 chain OS=Sus scrofa OX=9823 GN=COL9A2 PE=1 SV=2 CANONICAL=I3L8B2-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QVP2-1", "url": "https://www.uniprot.org/uniprotkb/I3L8B2/entry#A0A5G2QVP2-1", "sequence": { "sequence": "MPCTVRSSPEGRQPGTSRSGEGAGIWQARDPCLPPRRERSRAGRGRGPPGERGPPGPPGPPGVPGSDGIDGDKGPPGKAGPPGPKGEPGKPGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGITGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGVKGPPGLQGVKGHPGKRGLLGDAGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPGMAGPKGEMGPQGYKGMVGSVGAAGSPGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGATGPPGIDGKDGTPGTPGMKGSAGQAGRPGNPGHQGLAGMPGQPGTKGGPGDKGEPGQRGFPGVSGPPGKEGEPGPQGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLVGDRGLPGLPGRQGVAGRDASDQHIEDVMLKMMQEQLAEMAVSAKREALGATGMVGPPGPPGPPGYPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKRGEKGDRGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGAPGAPGEAGRPGLPGPMGLPGFCEPAACLGASAYASARLTEPGSIKGP", "length": 709, "header": "tr|A0A5G2QVP2-1|A0A5G2QVP2_PIG Computationally mapped isoform of Collagen type IX alpha 2 chain OS=Sus scrofa OX=9823 GN=COL9A2 PE=1 SV=1 CANONICAL=I3L8B2-1" }, "locus": { "chromosome": "6", "start_pos": 96080339, "end_pos": 96065864, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082101.1", "url": "https://www.ensembl.org/id/ENSSSCT00000082101.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066003.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066003.1" } ] } }, { "isoform_ac": "I3L8B2-1", "url": "https://www.uniprot.org/uniprotkb/I3L8B2/entry#I3L8B2-1", "sequence": { "sequence": "MAPAAAPRNLLILLQVLGLALAQIRGPPGERGPPGPPGPPGVPGSDGIDGDKGPPGKAGPPGPKGEPGKPGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGITGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGVKGPPGLQGVKGHPGKRGLLGDAGRQGKPGPKGDVGASGEQGIPGPPGPQGVRGYPGMAGPKGEMGPQGYKGMVGSVGAAGSPGEEGPRGPPGRAGEKGDVGSQGVRGPQGITGPKGATGPPGIDGKDGTPGTPGMKGSAGQAGRPGNPGHQGLAGMPGQPGTKGGPGDKGEPGQRGFPGVSGPPGKEGEPGPQGEIGPQGIMGQKGDHGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPGPPGPRGLVGDRGLPGLPGRQGVAGRDASDQHIEDVMLKMMQEQLAEMAVSAKREALGATGMVGPPGPPGPPGYPGKQGPHGHPGPRGIPGIVGAVGQIGNTGPKGKRGEKGDRGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGAPGAPGEAGRPGLPGPMGLPGFCEPAACLGASAYASARLTEPGSIKGP", "length": 688, "header": "tr|I3L8B2-1|I3L8B2_PIG Isoform 1 of Collagen type IX alpha 2 chain OS=Sus scrofa OX=9823 GN=COL9A2 PE=1 SV=2 CANONICAL=I3L8B2-1" }, "locus": { "chromosome": "6", "start_pos": 96080936, "end_pos": 96065864, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029893.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029893.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020272.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020272.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 313, "start_aa": "Thr", "end_pos": 313, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr313", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8B2", "url": "https://www.uniprot.org/uniprotkb/I3L8B2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621911", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621911", "resource": "KEGG Pathway" }, { "id": "R-SSC-1650814", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1650814", "resource": 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"glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "D3ZNT5-1", "protein_name": "Collagen type IX alpha 2 chain", "gene_name": "Col9a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTALPAPRSLLLFLQVLWLALAQIRGPPGEPGLPGPPGPPGVPGSDGIDGDKGPPGKVGPPGSKGEPGKPGPDGPDGKPGIDGLMGAKGEPGPMGTPGIKGQPGLPGPPGLPGPGFAGPPGPPGPVGLPGEIGTPGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAGVKGPQGLQGVKGHPGKRGILGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAGPKGEMGPRGYKGMVGSIGAAGPPGEEGPRGPPGRAGEKGDVGSQGARGPQGITGPKGTTGPPGIDGKDGTPGIPGMKGSAGQVGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGFPGISGPPGKEGEPGPRGETGPQGIMGEKGDQGERGPVGQPGPQGRQGPKGEQGSPGIPGPQGLPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGEKGLSGEPGLKGQQGVRGEPGYPGPSGDAGAPGVQGYPGLPGPRGLVGDRGVPGQPGRQGVVGRAASDQHIVDVVLKMIQEQLAEVAVSAKREALGATGMVGLPGPPGPPGYPGKQGPNGHPGPRGIPGIVGAVGQIGNTGPKGKRGEKGDQGEMGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSARLTEPGSIKGP", "length": 688 }, "evidence": [ { "id": "I3L8B2", "url": 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"evidence": [ { "id": "I3L8B2", "url": "https://omabrowser.org/oma/group/I3L8B2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q14055-1", "protein_name": "Collagen alpha-2(IX) chain", "gene_name": "COL9A2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"MLASGPGGQGSPRLLLSLLLLAAWEAGSGHTHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRMASKGGGDLLEVNLQNGILFVNSRIDREELCGRSLECSIHLEVIVERPLQVFHVEVEVKDINDNPPVFPATNKNLFISETRAVDSHFSLEGATDADIGANAQLTYRLSPNEYFSLEAPTSEEQVKPLELVLKKPLDREVTSELLLVLKATDGGKPELTGAVELHITVLDVNDNAPVFDKAVHRIKLLENARNGTLVVRLNASDLDEGSNSHVLYSFANDVFSNTEASFRIDSNSGEIKVNGKIDFEETKLWKLQIEAVDKGNPPMFGHCTVLVEILDVNDNAPELLVTSLLLSIPEDAPLGTVIALISVTDRDAGENAQVTCSLMPHSPFKLVSTFKNYYSLVLDGTLDRESVASYELVVSARDGGSPSLWATARVSVEVGDVNDNAPVFAQPEYTVFVKENNAPGCHIFTVSARDADAQENARVAYSLVERRVGERALSSYVSVHAESGQVFALQPLDREELELLQFRVSARDAGAPPLGSNVTLQVFVLDENDNAPALLPPPPPSPWQRVARWVGAGQVVAKVRAVDADSGYNAWLSYELQEAAAAPGGARSAFRVGLYTGEISTTRALDEADAARQRLLVLVKDHGEPALTATATVLLWLEDGGAAPKASSRLVVGPAAAAAEAALVDVHVYLVVAICAVSSLLVLTLLVYTALRCSAPRGEGACVPGPARLVCSSAVGSWSSSPRRRRRQGQRVCSGEGPPKADLMAFSPSVPPGSTSGDTGDQQEFCENVSTAILGCIMPLYISHGVVHQQITLSLLVQFFVVISLPANVAWIWCGHGCRKGLQWGGKEKRKKKDLLYGE", "length": 870, "header": "tr|I3L8B4-1|I3L8B4_PIG Isoform 1 of Cadherin domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=I3L8B4-1" }, "isoforms": [ { "isoform_ac": "I3L8B4-1", "url": "https://www.uniprot.org/uniprotkb/I3L8B4/entry#I3L8B4-1", "sequence": { "sequence": "MLASGPGGQGSPRLLLSLLLLAAWEAGSGHTHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRMASKGGGDLLEVNLQNGILFVNSRIDREELCGRSLECSIHLEVIVERPLQVFHVEVEVKDINDNPPVFPATNKNLFISETRAVDSHFSLEGATDADIGANAQLTYRLSPNEYFSLEAPTSEEQVKPLELVLKKPLDREVTSELLLVLKATDGGKPELTGAVELHITVLDVNDNAPVFDKAVHRIKLLENARNGTLVVRLNASDLDEGSNSHVLYSFANDVFSNTEASFRIDSNSGEIKVNGKIDFEETKLWKLQIEAVDKGNPPMFGHCTVLVEILDVNDNAPELLVTSLLLSIPEDAPLGTVIALISVTDRDAGENAQVTCSLMPHSPFKLVSTFKNYYSLVLDGTLDRESVASYELVVSARDGGSPSLWATARVSVEVGDVNDNAPVFAQPEYTVFVKENNAPGCHIFTVSARDADAQENARVAYSLVERRVGERALSSYVSVHAESGQVFALQPLDREELELLQFRVSARDAGAPPLGSNVTLQVFVLDENDNAPALLPPPPPSPWQRVARWVGAGQVVAKVRAVDADSGYNAWLSYELQEAAAAPGGARSAFRVGLYTGEISTTRALDEADAARQRLLVLVKDHGEPALTATATVLLWLEDGGAAPKASSRLVVGPAAAAAEAALVDVHVYLVVAICAVSSLLVLTLLVYTALRCSAPRGEGACVPGPARLVCSSAVGSWSSSPRRRRRQGQRVCSGEGPPKADLMAFSPSVPPGSTSGDTGDQQEFCENVSTAILGCIMPLYISHGVVHQQITLSLLVQFFVVISLPANVAWIWCGHGCRKGLQWGGKEKRKKKDLLYGE", "length": 870, "header": "tr|I3L8B4-1|I3L8B4_PIG Isoform 1 of Cadherin domain-containing protein OS=Sus scrofa OX=9823 GN= PE=4 SV=3 CANONICAL=I3L8B4-1" }, "locus": { "chromosome": "2", "start_pos": 142534032, "end_pos": 142530412, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027565.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027565.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020274.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020274.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8B4", "url": "https://www.uniprot.org/uniprotkb/I3L8B4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3L8B4", "url": "https://www.uniprot.org/uniprotkb/I3L8B4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "cell adhesion", "id": "GO:0007155", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007155", "evidence": [ { "database": "UniProtKB", "id": "I3L8B4", "url": "https://www.uniprot.org/uniprotkb/I3L8B4" } ], "pmid": "" }, { "name": "homophilic cell adhesion via plasma membrane adhesion molecules", "id": "GO:0007156", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007156", "evidence": [ { "database": "UniProtKB", "id": "I3L8B4", "url": "https://www.uniprot.org/uniprotkb/I3L8B4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "calcium ion binding", "id": "GO:0005509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005509", "evidence": [ { "database": "UniProtKB", "id": "I3L8B4", "url": "https://www.uniprot.org/uniprotkb/I3L8B4" } ], "pmid": "" }, { "name": "cell adhesion molecule binding", "id": "GO:0050839", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050839", "evidence": [ { "database": "UniProtKB", "id": "I3L8B4", "url": "https://www.uniprot.org/uniprotkb/I3L8B4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 257, "end_pos": 259, "annotation": "n_glycosylation_sequon" }, { "start_pos": 265, "end_pos": 267, "annotation": "n_glycosylation_sequon" }, { "start_pos": 548, "end_pos": 550, "annotation": "n_glycosylation_sequon" }, { "start_pos": 799, "end_pos": 801, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L8B4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 870, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L8B4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L8B4" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L8B4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8B4" }, { "id": "PS50268", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50268" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Cadherin", "eco_id": "ECO_0000259", "start_pos": 34, "end_pos": 133, "start_aa": "Ser", "end_aa": "Phe", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 257, "end_pos": 259 }, { "start_pos": 265, "end_pos": 267 }, { "start_pos": 548, "end_pos": 550 }, { "start_pos": 799, "end_pos": 801 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8C7-1", "uniprot_ac": "I3L8C7", "uniprot_id": "I3L8C7_PIG", "mass": { "chemical_mass": 145519.0, "monoisotopic_mass": 145519.0 }, "refseq": {}, "gene_names": [ { "name": "AATK", "type": "recommended", "evidence": [ { "id": "I3L8C7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8C7" } ] } ], "protein_names": [ { "name": "non-specific serine/threonine protein kinase", "type": "recommended", "evidence": [ { "id": "I3L8C7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8C7/entry#names_and_taxonomy" } ] }, { "name": "2.7.11.1", "type": "synonym", "evidence": [ { "id": "I3L8C7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8C7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8C7", "url": "https://www.uniprot.org/uniprotkb/I3L8C7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "AATK", "url": "https://www.uniprot.org/uniprotkb/I3L8C7", "locus": { "chromosome": "12", "start_pos": 1609621, "end_pos": 1573554, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017141", "url": "https://www.ensembl.org/id/ENSSSCG00000017141" } ] } } ], "crossref": [ { "id": "ENSSSCG00000017141", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017141", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd05087", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05087", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000719", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000719", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001245", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001245", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR008266", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008266", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011009", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011009", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017441", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017441", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR042817", "url": "https://www.ebi.ac.uk/interpro/entry/IPR042817", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24417", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24417", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24417:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24417:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07714", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07714", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "17989", "url": "https://www.rhea-db.org/rhea/17989", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "46608", "url": "https://www.rhea-db.org/rhea/46608", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3L8C7", "url": "https://www.uniprot.org/uniprotkb/I3L8C7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8C7-1", "url": "https://www.uniprot.org/uniprotkb/I3L8C7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSSSFFNPSFAFSSHFDPDGAPLSELSWSSSLSVVAVSFSGLFTVIALMLACLCCKKGGIGFKEFENAEGEEFAADFSAQGSPAAAAPNGPDVYVLPLTEVSLPMAKQPGRSVQLLKSTDLGRHSLLYLEEIGHGWFGKVFLGEVNSGISSTQVVVKELKASASVQEQVQFLEEAQPYRALQHSNLLQCLAQCAEVTPYLLVMEFCPMGDLKGYLRSCRVAESMAPDPLTLQRMACEVACGVLHLHRHNYVHSDLALRNCLLTADLTVKIGDYGLSHGKYREDYFVTADQLWVPLRWIAPELVDEVHCNLLVVDQTKASNVWSLGVTIWELFELGAQPYPHHSDRQVLAYAVREQQLKLPKPQLQLTLSDRWYEVMQFCWLQPEQRPTAEEVHLLLSYLCAKGATEAEEEFERRWRSLRPGGSGTGPGLGVAGLALGGPGELAAASSFPLLEQFAGESFHSEGDDVLTVTETSRGLNFEYKWEAGRGAEAFPPPGGALSPGCDGRLQELCALEGAPPGVVPVLSAHSPSVGSEYFIRLEDPAPASGHDPDCAGCAPSTRAAALRPDGSDHDDDSDGSAGASLAMEPLLGHVPPADGPWSHCDYYPCRSHARDLARASRSPSPETLMLEEPGAEDIAWGVGAFCPPFFEDPLGTSPSGSSGARPSPGGEELGEAEVPRAAQHRHWSSNVSANNNSGRRAPESWDLDHTGGYLDCCPGVKQTLRAVPELGPPLTPEDPRKPLPGPKGASPGQELGGCLGLHLYPAEGLSPAPCLVTPPWTEAAVSGGSPQAEPRLAEEAEGPARVQLPLPSLPSPSQEGALLPAEEASTPPTLPASPTPTGSHAPAPEPAQTLGSGSGSGSPELEAPGSEEEDTTEATSGVCTDLSSDGPQAEKPDVTAAFRPLQKQGGTPDSLDSLDIPSSASDGGCEGFSPSAAGTPGGQPRALDSGYDTENYESPEFVLKEAHEPEAFGEPASEGESPGPETRLPASLGGLSEKNPYRDSAYFSDLDPEPEPTLGPEEKPGSSPARRPGPDLEDPKSPRLQPVQPSPESGVPQGAQGASPGEAPPLPLPLPEDASPEPSACPTGPRLEPPWPQEPAQVPPVPGPGRSKIFLQALVSLNSESHGPEPQEALGLLSGPGLQERTGGPGASRTPLCLALPELPSAPERRPEEEEEESEDSDESDEELRCYSIQEPSEESEEEATPVPVVVAESQSARNLRSLLKMPSLLSEAFCEDLERKKKAVSFFDDVTVYLFDQESPTRELGEPFPGAKESPPAFLAGGPGSPSAPCRPRRADRSPEGTDTQGGGFEWDHGLPLTQAQEPTPPVPAAPPAPAAPGPFSRFTVSPAPASRFSITHVSDSDARPVGGPEADAGGSCKEA", 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"Thr936", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8C7", "url": "https://www.uniprot.org/uniprotkb/I3L8C7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "protein serine/threonine kinase activity", "id": "GO:0004674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004674", "evidence": [ { "database": "UniProtKB", "id": "I3L8C7", "url": "https://www.uniprot.org/uniprotkb/I3L8C7" } ], "pmid": "" }, { "name": "protein tyrosine kinase activity", "id": "GO:0004713", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004713", "evidence": [ { "database": "UniProtKB", "id": "I3L8C7", "url": "https://www.uniprot.org/uniprotkb/I3L8C7" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "I3L8C7", "url": "https://www.uniprot.org/uniprotkb/I3L8C7" } ], "pmid": "" } ] }, { "name": "Cellular Component", 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domain containing 4 OS=Sus scrofa OX=9823 GN=LINGO4 PE=4 SV=1 CANONICAL=I3L8E0-1" }, "isoforms": [ { "isoform_ac": "I3L8E0-1", "url": "https://www.uniprot.org/uniprotkb/I3L8E0/entry#I3L8E0-1", "sequence": { "sequence": "MAVATVPKHAWPPWPPLLFLLLLPAGSSGGCPAVCDCTSQPRAVLCAHRRLEAVPGGLPLDTELLDLSGNRLWGLQRGMLSRLGLLRELDLSYNQLSTLEPGAFQGLQSLLTLRMQGNRLRIMGPGVFSGLSALTLLDLRLNQLVLFLDGAFRELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDIERLPAGALQGLGQLKELEIHHWPSLEALEPGSLAGLNLSSLAITRCNLSSVPFQALHHLSFLRVLDLSQNPISAIPARRLSALVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPNKLVTLRLSGNPLTCDCRLLWLLRLRRRLDFGTTPPACAGPQHVQGKSLREFSDILPPGHFTCQPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTISWMRPQGAWLGRAGRVRVLQDGTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVEPPNGTLSDPNITMPGIPGPFFLDSRGVAMVLAVGFLPFLTSVTLCFGLIALWSKGKGQVKHHMTFDFVAPRTSGDKNSGGNRVTAKLF", "length": 593, "header": "tr|I3L8E0-1|I3L8E0_PIG Isoform 1 of Leucine rich repeat and Ig domain containing 4 OS=Sus scrofa OX=9823 GN=LINGO4 PE=4 SV=1 CANONICAL=I3L8E0-1" }, "locus": { "chromosome": "4", "start_pos": 97405816, "end_pos": 97404038, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027984.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027984.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020300.1", "url": "https://www.ensembl.org/id/ENSSSCP00000020300.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8E0", "url": "https://www.uniprot.org/uniprotkb/I3L8E0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622649", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622649", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "D4A2G1-1", "protein_name": "Leucine rich repeat and Ig domain containing 4", "gene_name": "Lingo4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQTPALERCSAQLDAFPQLLRPQGMDAATAPKQAWLLWSPLLFLLLLPGGSISSCPTLCDCTSQTRAVLCAHRRLDTVPGGLPLDTEVLDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQQLEVGDNHLVFVAPGAFSGLAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPSGALRGLGQLKELEIHHWPSLEALDPGSLVGLNLSSLAITHCNLSSVPFQALHHLSFLQVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLWLLRLRRRLDFGTSPPACAGPQHVQGKNLREFSDILPPGHFTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWMRPQGSWLGRVGRVRVLEDGTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVEPPNGTLSDPNVTMPGIPGPFSLDSRGVAMVLAVGFLPFLTSVTLCFGLIALWSKGKGRVKHHMTFDFVAPRPSGDKNSGGNRVTAKLF", "length": 618 }, "evidence": [ { "id": "I3L8E0", "url": "https://omabrowser.org/oma/group/I3L8E0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q149C3-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain containing-NOGO receptor-interacting protein 4", "gene_name": "Lingo4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDAATAPKQAWLPWSPLLFLLLLPGGSISSCPTVCDCTSQTRAVFCAHRRLDTIPGGLPLDTELLDLSGNRLWGLQRGMLSRLGQLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTALTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLSTVPGLALAQLPALVALRLRELDIERLPAGALRGLGQLKELEIHHWPSLEALDPGSLVGLNLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLWLLRLRRRLDFGTSPPACAGPQHVQGKSLREFSDILPPGHFTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWMRPQGAWLGRVGRVRVLEDGTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVEPPNGTLSDPNITMPGIPGPFFLDSRGVAMVLAVGFLPFLTSVTLCFGLIALWSKGKGRVKHHMTFDFVAPRPSGDKNSGGNRVTAKLF", "length": 593 }, "evidence": [ { "id": "I3L8E0", "url": "https://omabrowser.org/oma/group/I3L8E0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6UY18-1", "protein_name": "Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4", "gene_name": "LINGO4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDAATAPKQAWPPWPPLLFLLLLPGGSGGSCPAVCDCTSQPQAVLCGHRQLEAVPGGLPLDTELLDLSGNRLWGLQQGMLSRLSLLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIMGPGVFSGLSALTLLDLRLNQIVLFLDGAFGELGSLQKLEVGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGLALARLPALVALRLRELDIGRLPAGALRGLGQLKELEIHLWPSLEALDPGSLVGLNLSSLAITRCNLSSVPFQALYHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLWLLRLRRHLDFGMSPPACAGPHHVQGKSLKEFSDILPPGHFTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWMRPHGAWLGRAGRVRVLEDGTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVEPPNGTLSDPNITVPGIPGPFFLDSRGVAMVLAVGFLPFLTSVTLCFGLIALWSKGKGRVKHHMTFDFVAPRPSGDKNSGGNRVTAKLF", "length": 593 }, "evidence": [ { "id": "I3L8E0", "url": "https://omabrowser.org/oma/group/I3L8E0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3L8E0", "url": "https://www.uniprot.org/uniprotkb/I3L8E0" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "signaling receptor activity", "id": "GO:0038023", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038023", "evidence": [ { "database": "UniProtKB", "id": "I3L8E0", "url": "https://www.uniprot.org/uniprotkb/I3L8E0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 191, "end_pos": 193, "annotation": "n_glycosylation_sequon" }, { "start_pos": 253, "end_pos": 255, "annotation": "n_glycosylation_sequon" }, { "start_pos": 263, "end_pos": 265, "annotation": "n_glycosylation_sequon" }, { "start_pos": 492, "end_pos": 494, "annotation": "n_glycosylation_sequon" }, { "start_pos": 508, "end_pos": 510, "annotation": "n_glycosylation_sequon" }, { "start_pos": 515, "end_pos": 517, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L8E0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 593, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L8E0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L8E0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L8E0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8E0" }, { "id": "PS50835", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50835" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Ig-like", "eco_id": "ECO_0000259", "start_pos": 412, "end_pos": 502, "start_aa": "Pro", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 191, "end_pos": 193 }, { "start_pos": 253, "end_pos": 255 }, { "start_pos": 263, "end_pos": 265 }, { "start_pos": 492, "end_pos": 494 }, { "start_pos": 508, "end_pos": 510 }, { "start_pos": 515, "end_pos": 517 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8N0-1", "uniprot_ac": "I3L8N0", "uniprot_id": "I3L8N0_PIG", "mass": { "chemical_mass": 56768.0, "monoisotopic_mass": 56768.0 }, "refseq": { "ac": "XP_020938866", "name": "T-complex protein 11-like protein 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938866" }, "gene_names": [ { "name": "TCP11L1", "type": "recommended", "evidence": [ { "id": "I3L8N0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8N0" } ] }, { "name": "TCP11L1", "type": "synonym", "evidence": [ { "id": "XP_020938866", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938866" } ] } ], "protein_names": [ { "name": "T-complex 11 like 1", "type": "synonym", "evidence": [ { "id": "I3L8N0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8N0/entry#names_and_taxonomy" } ] }, { "name": "T-complex protein 11-like protein 1", "type": "synonym", "evidence": [ { "id": "XP_020938866", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938866" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8N0", "url": "https://www.uniprot.org/uniprotkb/I3L8N0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TCP11L1", "url": "https://www.uniprot.org/uniprotkb/I3L8N0", "locus": { "chromosome": "2", "start_pos": 27855471, "end_pos": 27899766, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030326", "url": "https://www.ensembl.org/id/ENSSSCG00000030326" } ] } } ], "crossref": [ { "id": "ENSSSCG00000030326", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030326", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100621866", "url": "https://www.ncbi.nlm.nih.gov/gene/100621866", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008862", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008862", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621866", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621866", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CRDEDIN", "url": "https://omabrowser.org/oma/group/CRDEDIN/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L8N0", "url": "https://www.orthodb.org/?gene=I3L8N0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12832", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12832", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12832:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12832:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05794", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05794", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020938866", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938866", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L8N0", "url": "https://www.uniprot.org/uniprotkb/I3L8N0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8N0-1", "url": "https://www.uniprot.org/uniprotkb/I3L8N0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSENLDKSNINEAGKSKSNDSEQGLEDAVEGSDEALQKKIKSGSPSTQRVQRPHSSPPRFVTVEELLETAKGVTNMALAHEIVVNGDFRIKPVELPEDSLEKRVKDIVHKAFWDCLSVQLSEDPPTYDRAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPVRDEEVKKLKDIKEIVPLFRAIFSVLDMMKVDMANFAVSSIRPHLMQQSVEYERKQFQELLEKQPNSLDFVTQWLEEAADDLMNQRYRNALPAGGGAAGSEASPRPDPAAVQNYAYLKLLKWDHLHRLFPETVLMDRSRFQELQLQLEQLTVLGAVLLVTFSMAAPGISSRADFAEKLKMIVKILLTDMHQPSFHLEDALTAVGEKVCLEVSSCLSQCGFSPLTPDKEAVLKGQIQAVASPDNPIRRIMDSRILTFLETHLASSHQKPLPTAPGGLGPVQKELEEVAVKFVRLVNYNKMVFSPYYDAILSKILATS", "length": 509, "header": "tr|I3L8N0-1|I3L8N0_PIG Isoform 1 of T-complex 11 like 1 OS=Sus scrofa OX=9823 GN=TCP11L1 PE=1 SV=2 CANONICAL=I3L8N0-1" }, "isoforms": [ { "isoform_ac": "I3L8N0-1", "url": "https://www.uniprot.org/uniprotkb/I3L8N0/entry#I3L8N0-1", "sequence": { "sequence": "MSENLDKSNINEAGKSKSNDSEQGLEDAVEGSDEALQKKIKSGSPSTQRVQRPHSSPPRFVTVEELLETAKGVTNMALAHEIVVNGDFRIKPVELPEDSLEKRVKDIVHKAFWDCLSVQLSEDPPTYDRAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPVRDEEVKKLKDIKEIVPLFRAIFSVLDMMKVDMANFAVSSIRPHLMQQSVEYERKQFQELLEKQPNSLDFVTQWLEEAADDLMNQRYRNALPAGGGAAGSEASPRPDPAAVQNYAYLKLLKWDHLHRLFPETVLMDRSRFQELQLQLEQLTVLGAVLLVTFSMAAPGISSRADFAEKLKMIVKILLTDMHQPSFHLEDALTAVGEKVCLEVSSCLSQCGFSPLTPDKEAVLKGQIQAVASPDNPIRRIMDSRILTFLETHLASSHQKPLPTAPGGLGPVQKELEEVAVKFVRLVNYNKMVFSPYYDAILSKILATS", "length": 509, "header": "tr|I3L8N0-1|I3L8N0_PIG Isoform 1 of T-complex 11 like 1 OS=Sus scrofa OX=9823 GN=TCP11L1 PE=1 SV=2 CANONICAL=I3L8N0-1" }, "locus": { "chromosome": "2", "start_pos": 27899742, "end_pos": 27858208, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029285.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029285.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020390.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020390.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8N0", "url": "https://www.uniprot.org/uniprotkb/I3L8N0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621866", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621866", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2K6F1-1", "protein_name": "T-complex 11 like 1", "gene_name": "Tcp11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSENLDKSHVNEAGESKSAASEEGQKGALECSDEALQEKVKSDSPSPLRVGRPHSSPPRLVTVEELLETAKGVTNMALAHEIVVNGDFRINAVELAEGSLEKRVKEIVHKAFWDCLSVQLSEDPPTYDHAIKLVGEIKETLLSFLLPGHTRLRNQITETLDLELIKQEAENGALDISKLAEFIVGMMGILCAPARDEEVKKLKDVKEIVPLFRAIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEVLEKQPNSLDFVTQWLEEASNDLLTQKCKHALPAGGGAAGSGDAPLLTAASVQNYAYLKLLKWDHFRRPFPETVLMDQPRFQELQLQLEQLALLGAVLLVTFSTSAPAVSGHAGFAEKLKTVVKILLADVHLPSFQLEDALTSIGEKVCLEVSSCLSMCGSSPFSVSKETVLKGQIQALASPDDPIRRIMESRILTFLETYLASGHQKLLPTVPGGLGPIQKELEEVAVKFVRLVNYNKMVFCPYYDEILSKLLLRS", "length": 509 }, "evidence": [ { "id": "I3L8N0", "url": "https://omabrowser.org/oma/group/I3L8N0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A3Q1LT06-1", "protein_name": "T-complex 11 like 1", "gene_name": "TCP11L1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSENLDKSNINEAGKSKSSDSEQGLEDAVEVSDEALQKKIKSGSPSTQRVQRPHSSPPRFVTVEELLETAKGVTNMALAHEIVINGDFQIKPVELPEDSLEKRVKDIVHKAFWDCLSVQLSEVPPTYDRAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPVRDEEVKKLKDIKEIVPLFRAIFSVLDLMKVDMANFAVSSIRPHLMQQSIEYERKQFQEFLEKQPNSLDFVTQWLQEATDDLMSQKYKNALPAAGGAAGSGDGPQLDPVAVQNYAYLKLLKWDHLHRPFPETVLMDHSRFQEFQLQLEQLTVLGAVLLVTFSMAAPGIASRADFAEKLKMIVKILLTDMHLPSFHLEDALTAVGEKVCLEVSSCLSLCGLSPLTTDKEAVLKGQIQAVASPDNPIRRIVDSRILTFLDAYLASSHQKPSPIAPGGLGPIQKELEEVAVKFVRLVNYNKMVFSPYYDAILSKTLARS", "length": 509 }, "evidence": [ { "id": "I3L8N0", "url": "https://omabrowser.org/oma/group/I3L8N0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A8C2L9T4-1", "protein_name": "T-complex protein 11-like protein 1", "gene_name": "Tcp11l1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSENLDKSHINEAGESKPSDSEQGLEGALECSDEALQKKIKSDSPSPQRVGRPHSSPARLVTVEELLETAKGVTNMALAHEIVVNGDFRIKAVELAEGSLEKRVKEIVHKAFWDCLSVQLSEDPPTYDHAIKLVGEIKETLLSFLLPGHTRLRDQITEVLDLELIKQEAENGALDISKLAEFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFRAIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEVLEKQPNSLDFVTQWLEEASNDLLTQKYKHTLPAGGGAAGSGDAPVLTPVSVQNYAYLRLLKWDHFRRPFPETVLMDQSRFQELQLQLEQLAILGAVLLVTLSSATPGISGRADFAEKLKMTVKILLMDMHLPSFHLEDALTSIGEKVCLEVSSCLSLCGSSPFSINKETVLKGQIQALASPDDPIRRIVESRIFTFLETYLASGHQKLLATVPGGLGPIQKELEEVAVKFVRLVNYNKMVFCPYYDAILSKLLLRS", "length": 509 }, "evidence": [ { "id": "I3L8N0", "url": "https://omabrowser.org/oma/group/I3L8N0/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BTG3-1", "protein_name": "T-complex protein 11-like protein 1", "gene_name": "Tcp11l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLDKSHVDEAGEAEAAASEQGLEGALECSDETLQKKVKSDSPSSQRVGRPHSSPARLVTVEELLETAKGVTNMALAHEIVVTGDFRINAVELAEGSLEKRVKEIVHKAFWDCLSVQLSEEPPTYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLELIKQEAENGALDISKLAEFIIGMMGILCAPARDEEVKKLKGIKEIVPLFRAIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERRKFQEVLERQPNSLDFATQWLEEATNDLLSQKYKHALPAGGGAAGSGDAPLLTPVSVQNFAYLKLLKWDHFQRPFPETVLMDQSRFQELQLQLEQLAVLGAVLLVTFSTAAPGISGHADFAEKLKMMVKTLLTDMHLPSFHLEDALASIGEKVCLEVSSCLSLCGSSPFSVAKETVLKGQIQALASPEDPIRRIMESRIFTFLETYLASGHQKPLPTVPGGLGPIQKELEEVAVKFVRLVNYNKMVFCPYYDAILSKLLLRS", "length": 509 }, "evidence": [ { "id": "I3L8N0", "url": "https://omabrowser.org/oma/group/I3L8N0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NUJ3-1", "protein_name": "T-complex protein 11-like protein 1", "gene_name": "TCP11L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRFVTVEELLETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLSPVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFHELQLQLEQLTILGAVLLVTFSMAAPGISSQADFAEKLKMIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDKETVLKGQIQAVASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVAIKFARLVNYNKMVFCPYYDAILSKILVRS", "length": 509 }, "evidence": [ { "id": "I3L8N0", "url": "https://omabrowser.org/oma/group/I3L8N0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9W461-1", "protein_name": "T-complex protein 11-like protein 1", "gene_name": "Dmel\\CG16721", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDAQENRSEQSGQSGDHEEHEERRIRTDSESSVESMTRFVLPSLDGTPPKIVTLDEVSSMFKNLRNMELAHEIALNPDFKLQKYEPPSDSLEGAIKKMVHKAFWDLLRVQLDRQPPSYDQAIRLLAEIKECFPQLLSPNNERALAHINEVLDDSVIRQQAERGTLDFRAYANFVINILSRSCSPARDEAVAALRKIDDVVDTFRCILELMTLMKLDMANFMLRLARTEIAANSVQYEKEKFSKYLREFHGNVGFPATEDWLQRHRSGSSDDETIYNAYMQLIDYPADKEFPELLRIDKERFAGLSWRAQRLILCASLISVAQGMPIISQRRENRIKLAQQLDIIVQDIKNQDQVASTIESCYEQIRSFVNKALEQENLPALSDADQAALKNQVLKLANKTSPVPSLMAKRLDGYVRVTLRSNGSIPPPPSGFADYQEELVAFIASFRRLVSYNHAVFGEHFHQILNKTLPGEETEATTSTASGINPGQAQTAKP", "length": 494 }, "evidence": [ { "id": "I3L8N0", "url": "https://omabrowser.org/oma/group/I3L8N0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "microtubule", "id": "GO:0005874", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005874", "evidence": [ { "database": "UniProtKB", "id": "I3L8N0", "url": "https://www.uniprot.org/uniprotkb/I3L8N0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3L8N0", "url": "https://www.uniprot.org/uniprotkb/I3L8N0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 19, "end_pos": 21, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 19, "end_pos": 21 } ] }, "class_list": [], 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"total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8Q6-1", "uniprot_ac": "I3L8Q6", "uniprot_id": "I3L8Q6_PIG", "mass": { "chemical_mass": 81584.0, "monoisotopic_mass": 81584.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF235", "type": "recommended", "evidence": [ { "id": "I3L8Q6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6" } ] } ], "protein_names": [ { "name": "Zinc finger protein 235", "type": "recommended", "evidence": [ { "id": "I3L8Q6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "May be involved in transcriptional regulation.", "evidence": [ { "database": "UniProtKB", "id": "I3L8Q6", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6#function" }, { "database": "UniProtKB", "id": "ARBA00003767", "url": "https://www.uniprot.org/uniprotkb/ARBA00003767#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8Q6", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF235", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6", "locus": { "chromosome": "6", "start_pos": 50876197, "end_pos": 50893511, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000022434", "url": "https://www.ensembl.org/id/ENSSSCG00000022434" } ] } } ], "crossref": [ { "id": "I3L8Q6", "url": "https://alphafold.ebi.ac.uk/entry/I3L8Q6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022434", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022434", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR24390", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24390", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24390:SF88", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24390:SF88", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3L8Q6", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8Q6-1", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTKFQQAVTFTDVCVVFTEEELGLLDLAQRKLYRDVMLENFQNLLSVGHQSSKPDVIAQLEREERLWGTELQTQRGRLAGGRNQNEMETLPEMAVGCLSLGELSCCQIKTHVVSESTKSQKDSGINVPGTRSHLPELPRCPAGVPRQACTEASCPLALREQRSSFSENRASPARRAPGPCRKLCLNGAQNYPRGGAQTPSRCTCCAFAPCAHVLRGLPQRLQEEPAPPRETAHSGRGPGGEAARAPRLVQRSLMAVGPNPYPCDERQRGFGDRPGLAAPPQAPRGAPAPLRRTQERALPIAQGILPGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYSCHECGKSFNQTSHLYAHLPIHTGEKPYRCQSCGKGFSRSTDLNIHCRVHTGEKPYKCEACGKGFTQRSHLQAHERIHTGEKPYTCTDCGKRFSCSSNLHTHQRVHTEEKPYKCEQCGKCFSLSFNLHSHRRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCSVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYTCETCGKAFSQRSNLQVHQIIHTGEKPFKCEACGKEFSWSAGLSAHQRVHTGEKPYMCQQCGKGFSQASHFHTHQRVHTGERPYICDICCKGFSQRSHLVYHQRVHAGGNL", "length": 730, "header": "tr|I3L8Q6-1|I3L8Q6_PIG Isoform 1 of Zinc finger protein 235 OS=Sus scrofa OX=9823 GN=ZNF235 PE=3 SV=2 CANONICAL=I3L8Q6-1" }, "isoforms": [ { "isoform_ac": "I3L8Q6-1", "url": "https://www.uniprot.org/uniprotkb/I3L8Q6/entry#I3L8Q6-1", "sequence": { "sequence": "MTKFQQAVTFTDVCVVFTEEELGLLDLAQRKLYRDVMLENFQNLLSVGHQSSKPDVIAQLEREERLWGTELQTQRGRLAGGRNQNEMETLPEMAVGCLSLGELSCCQIKTHVVSESTKSQKDSGINVPGTRSHLPELPRCPAGVPRQACTEASCPLALREQRSSFSENRASPARRAPGPCRKLCLNGAQNYPRGGAQTPSRCTCCAFAPCAHVLRGLPQRLQEEPAPPRETAHSGRGPGGEAARAPRLVQRSLMAVGPNPYPCDERQRGFGDRPGLAAPPQAPRGAPAPLRRTQERALPIAQGILPGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYSCHECGKSFNQTSHLYAHLPIHTGEKPYRCQSCGKGFSRSTDLNIHCRVHTGEKPYKCEACGKGFTQRSHLQAHERIHTGEKPYTCTDCGKRFSCSSNLHTHQRVHTEEKPYKCEQCGKCFSLSFNLHSHRRVHTGEKPYKCEECGKGFSSASSFQSHQRVHTGEKPFRCSVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRVHTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYTCETCGKAFSQRSNLQVHQIIHTGEKPFKCEACGKEFSWSAGLSAHQRVHTGEKPYMCQQCGKGFSQASHFHTHQRVHTGERPYICDICCKGFSQRSHLVYHQRVHAGGNL", "length": 730, "header": "tr|I3L8Q6-1|I3L8Q6_PIG Isoform 1 of Zinc finger protein 235 OS=Sus scrofa OX=9823 GN=ZNF235 PE=3 SV=2 CANONICAL=I3L8Q6-1" }, "locus": { "chromosome": "6", "start_pos": 50890810, "end_pos": 50877201, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026604.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026604.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020416.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020416.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr 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"go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3L8R5", "url": "https://www.uniprot.org/uniprotkb/I3L8R5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8U6-1", "uniprot_ac": "I3L8U6", "uniprot_id": "I3L8U6_PIG", "mass": { "chemical_mass": 237029.0, "monoisotopic_mass": 237029.0 }, "refseq": {}, "gene_names": [ { "name": "TDRD6", "type": "recommended", "evidence": [ { "id": "I3L8U6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" } ] } ], "protein_names": [ { "name": "Tudor domain-containing protein 6", "type": "recommended", "evidence": [ { "id": "I3L8U6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8U6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Tudor domain-containing protein involved in germ cell development, more specifically the formation of chromatoid body (during spermiogenesis), Balbiani body (during oogenesis), germ plasm (upon fertilization), and for proper miRNA expression and spliceosome maturation. Essential for RNA-dependent helicase UPF1 localization to chromatoid body, for UPF1-UPF2 and UPF1-DDX4 interactions which are required for mRNA degradation, using the extended 3' UTR-triggered nonsense-mediated mRNA decay (NMD) pathway. Involved in spliceosome maturation and mRNA splicing in prophase I spermatocytes through interaction with arginine N-methyltransferase PRMT5 and symmetrically arginine dimethylated SNRPB (small nuclear ribonucleoprotein-associated protein).", "evidence": [ { "database": "UniProtKB", "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6#function" }, { "database": "UniProtKB", "id": "ARBA00060012", "url": "https://www.uniprot.org/uniprotkb/ARBA00060012#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TDRD6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6", "locus": { "chromosome": "7", "start_pos": 41483469, "end_pos": 41468780, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000021218", "url": "https://www.ensembl.org/id/ENSSSCG00000021218" } ] } } ], "crossref": [ { "id": "ENSSSCG00000021218", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021218", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd20420", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20420", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd20421", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd20421", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR002999", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002999", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035437", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035437", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047444", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047444", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR047445", "url": "https://www.ebi.ac.uk/interpro/entry/IPR047445", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050621", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050621", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PWLLTQM", "url": "https://omabrowser.org/oma/group/PWLLTQM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR22948", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22948", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR22948:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22948:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00567", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00567", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8U6-1", "url": "https://www.uniprot.org/uniprotkb/I3L8U6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MCSTPGLPTPGTSLVLRVSYVDVQPEVIPVQLWGLVGERRDEYVRLSREIQEAAATARGPWALGGASASPGELCLVQVGLLWHRGRVVSRQAQESRVFLLDEGRTVTAGVSSLAPGRSEFFHLPSEVLGCVLAGLVPAGSGGAGGGEPQHWPASAVDFLSSLQGKEVQGRVLDVLLLHRLVLLEVPGLYQEMQELGLARLMPDSLFRSLLKRYLTATVAALGPGVQVVPRLPPKHEHPALDYFYPQLQLGVTEPVVVTQVCHPHRIHCQLRSLSQEIHRLSESMAQIYRGSVGTGDENSTSATWEEREESPDKPGSPCASCGLDGHWYRALLLEMFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPCALYGLWDGGRGWSRSQVGDLKALILGQAVNAKIEFYCSFEHVYYVTLYGEDGINLNCVFGLQSCCLADRFLQSQGTEEEEEEEEPETETALQSHSPAEEVDEEIALLALRSIKLKMNTFYDAQVEFVKNPSEFWIRLRKHKGTFNKLTRRMCNFYASASKLDGVVLKPEANDLCCVKWKENGYFRAMVTRLDDKSVDVFLVDRGNSENVDWCDVRMLLPQFRQLPILALPCTLADIWPLGKNWSQEAVSFFKKTVLHKELVIHVLDKQESQYVIEILDESRTGEENISKVIAQAGFAKYQEFETKENISVSAHSLRHVSNHFTAENNKISPVTKKIEQKAKRAEKTTAVAEALTDATVVTNISPGLVVQEKEKIVSVYSPLIPNFLEMKPGSSGKGELEVGSTVEVQVSYVENPGYFWCQLTRNIQGFKTLMCSIQDYCQNIASPYQATTPACLAKRTANGKWSRALISGVQPSEHVKVIFVDYGDEDMVPLKNLYSISEEFLKVKAQAFRCSLYNLIQPTGQNPFVWDEKAIQAFSDFVDHAWEDSLELKCTIFALASIRDEEPFTVVDLLTPFQSACHFLVEKRLARPVKLQQPLESSVRLHSYYYSTHNMKIGSEESVYITHVNDPWTFYCQLGRNAHILEQLSCHIMQLSKALLNFKTPSLVPGPLCLAKYTDGSWYRGIIIDREPNKVFFVDFGNIYVVPNDDLLPIPSDAYDVCLLPMQAVKCSLSDIPDHIPEEVTMWFQETVLDKSLKALVVAKDPDGRLVIELYDDSLQINATINEKLGLLGNKSGTRKTSEALLSTVEALEMKKDDMKLSATEYLSKSVEIKSASMAILGESYKPKMSSAPKELKLGRSSTKTNLVTQYQDSLGTQDNLVPPAPIEKKEESLAEPPLKATKPEATLLERKIGDSGNKDLPLKFSEFPQKTIVPGFKTTVYVSHINDLSDFYAEINRLSERLNDVRTRPEYYSGPPLQRGDTICAIFPEDNLWYRAVVKEQQPNDLLSVQFIDYGNVSVVCTNQIGKLDLVHALLPRLCIHCSLKGPWVPDILNHKEMMHYFSLRTSEAQIRCEFVQFQDKWEVILADDHGIIAEDMISRYEFREKSQIGLSTQIIKGACSKSVPKTDRDTSVFLNWYDPNMKMVRAYAMVIDGPEYFWCQFADTEKLQYLEVEVQTAGERVTDRRSCILCPQIGDPCIVRYREDGHYYRALVTSICEDDLVSVRLVDFGNIEDCVHPRALWSIPSELLSVPMQAFPCCLAGFNISEGTCPQEGNDYFYEIVTEDVLEITILDIKRDVCDIPLAVVDLKSKGESIREKMKKYSKIATSNSELPAEKNGPEIKEALGSSSPDVGMKKPSSKAGREKTLYVESQTDALSERIEKDLNIVETKLGKFCDPGPDNIFESPGKDKIATEMLEARVECPLVDKAKFDDKYLITGFNTLLPYSSKTKEILELNSLEEPLSPDDESKEFLEVESSVLQDSLVRDEEKDGLGLVPPMGPLPQGSDFGATLPPFPMQLPLNSEAEKQLELEVPTAQLCLEDKINPLSLRVSQKAEESPCAKDTGRSSCVDCFDEEPRLPLHRHGKSCHPKMQIAVNVYKEEFAEYKNRDAMLSLNSLFSEEDSRDGRKHNNTFSDHVPAQPETTYTLKGFTVGSKCVVWSSLRNTWSKCEILEVAEEGTRVLNLSNGLEEVVSPENVWNGIPKLDKSPSKAVFQTVGQDLYFMSSDDTAMKGNVCFF", "length": 2113, "header": "tr|I3L8U6-1|I3L8U6_PIG Isoform 1 of Tudor domain-containing protein 6 OS=Sus scrofa OX=9823 GN=TDRD6 PE=1 SV=2 CANONICAL=I3L8U6-1" }, "isoforms": [ { "isoform_ac": "I3L8U6-1", "url": "https://www.uniprot.org/uniprotkb/I3L8U6/entry#I3L8U6-1", "sequence": { "sequence": "MCSTPGLPTPGTSLVLRVSYVDVQPEVIPVQLWGLVGERRDEYVRLSREIQEAAATARGPWALGGASASPGELCLVQVGLLWHRGRVVSRQAQESRVFLLDEGRTVTAGVSSLAPGRSEFFHLPSEVLGCVLAGLVPAGSGGAGGGEPQHWPASAVDFLSSLQGKEVQGRVLDVLLLHRLVLLEVPGLYQEMQELGLARLMPDSLFRSLLKRYLTATVAALGPGVQVVPRLPPKHEHPALDYFYPQLQLGVTEPVVVTQVCHPHRIHCQLRSLSQEIHRLSESMAQIYRGSVGTGDENSTSATWEEREESPDKPGSPCASCGLDGHWYRALLLEMFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPCALYGLWDGGRGWSRSQVGDLKALILGQAVNAKIEFYCSFEHVYYVTLYGEDGINLNCVFGLQSCCLADRFLQSQGTEEEEEEEEPETETALQSHSPAEEVDEEIALLALRSIKLKMNTFYDAQVEFVKNPSEFWIRLRKHKGTFNKLTRRMCNFYASASKLDGVVLKPEANDLCCVKWKENGYFRAMVTRLDDKSVDVFLVDRGNSENVDWCDVRMLLPQFRQLPILALPCTLADIWPLGKNWSQEAVSFFKKTVLHKELVIHVLDKQESQYVIEILDESRTGEENISKVIAQAGFAKYQEFETKENISVSAHSLRHVSNHFTAENNKISPVTKKIEQKAKRAEKTTAVAEALTDATVVTNISPGLVVQEKEKIVSVYSPLIPNFLEMKPGSSGKGELEVGSTVEVQVSYVENPGYFWCQLTRNIQGFKTLMCSIQDYCQNIASPYQATTPACLAKRTANGKWSRALISGVQPSEHVKVIFVDYGDEDMVPLKNLYSISEEFLKVKAQAFRCSLYNLIQPTGQNPFVWDEKAIQAFSDFVDHAWEDSLELKCTIFALASIRDEEPFTVVDLLTPFQSACHFLVEKRLARPVKLQQPLESSVRLHSYYYSTHNMKIGSEESVYITHVNDPWTFYCQLGRNAHILEQLSCHIMQLSKALLNFKTPSLVPGPLCLAKYTDGSWYRGIIIDREPNKVFFVDFGNIYVVPNDDLLPIPSDAYDVCLLPMQAVKCSLSDIPDHIPEEVTMWFQETVLDKSLKALVVAKDPDGRLVIELYDDSLQINATINEKLGLLGNKSGTRKTSEALLSTVEALEMKKDDMKLSATEYLSKSVEIKSASMAILGESYKPKMSSAPKELKLGRSSTKTNLVTQYQDSLGTQDNLVPPAPIEKKEESLAEPPLKATKPEATLLERKIGDSGNKDLPLKFSEFPQKTIVPGFKTTVYVSHINDLSDFYAEINRLSERLNDVRTRPEYYSGPPLQRGDTICAIFPEDNLWYRAVVKEQQPNDLLSVQFIDYGNVSVVCTNQIGKLDLVHALLPRLCIHCSLKGPWVPDILNHKEMMHYFSLRTSEAQIRCEFVQFQDKWEVILADDHGIIAEDMISRYEFREKSQIGLSTQIIKGACSKSVPKTDRDTSVFLNWYDPNMKMVRAYAMVIDGPEYFWCQFADTEKLQYLEVEVQTAGERVTDRRSCILCPQIGDPCIVRYREDGHYYRALVTSICEDDLVSVRLVDFGNIEDCVHPRALWSIPSELLSVPMQAFPCCLAGFNISEGTCPQEGNDYFYEIVTEDVLEITILDIKRDVCDIPLAVVDLKSKGESIREKMKKYSKIATSNSELPAEKNGPEIKEALGSSSPDVGMKKPSSKAGREKTLYVESQTDALSERIEKDLNIVETKLGKFCDPGPDNIFESPGKDKIATEMLEARVECPLVDKAKFDDKYLITGFNTLLPYSSKTKEILELNSLEEPLSPDDESKEFLEVESSVLQDSLVRDEEKDGLGLVPPMGPLPQGSDFGATLPPFPMQLPLNSEAEKQLELEVPTAQLCLEDKINPLSLRVSQKAEESPCAKDTGRSSCVDCFDEEPRLPLHRHGKSCHPKMQIAVNVYKEEFAEYKNRDAMLSLNSLFSEEDSRDGRKHNNTFSDHVPAQPETTYTLKGFTVGSKCVVWSSLRNTWSKCEILEVAEEGTRVLNLSNGLEEVVSPENVWNGIPKLDKSPSKAVFQTVGQDLYFMSSDDTAMKGNVCFF", "length": 2113, "header": "tr|I3L8U6-1|I3L8U6_PIG Isoform 1 of Tudor domain-containing protein 6 OS=Sus scrofa OX=9823 GN=TDRD6 PE=1 SV=2 CANONICAL=I3L8U6-1" }, "locus": { "chromosome": "7", "start_pos": 41483466, "end_pos": 41468780, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025267.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025267.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020457.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020457.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 107, "start_aa": "Thr", "end_pos": 107, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr107", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 9, "start_aa": "Thr", "end_pos": 9, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr9", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "F1R237-1", "protein_name": "Tudor domain-containing 6", "gene_name": "tdrd6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MCSIPGLPSKGSNVPVLITRVNLNPSCVLVEFWGNFDEDRKFAYQQLKKEIQYPRECFSESDGNPGDLCLVQVYETWYRARIVSRDSDEYSVFLIDEGRTLRAAVNTLAWGKSDFFYLPPEVEFCILANALPLSPENNWSSMALEFMKTFCGRRVNATVQDVLVAHRTFLLDIPCLSRQMFEMGFAKKLYSDQFMEFVVRSLQASTGTSDLKRISSIRTKPVEIIEQKEKQQAYMFPELQTDTVETVVITEVTSPFRIFCQLKVFSQELKKLTEQITQYYEGRVGSYFARAENLGSPCASRGSDGKWYRSVLQQVMSANNVVEVLHVDYGKKQFVQVENVKPLASEFFRMPVVTYVCSLHGIVDKGVGWTASQIDYLKSLLLNRTVIAKFQYQSLSEGVHYVTLYGEENTNINKLFELKPKCSLDSDMTLADFAVQKSPSSQKSKISRTTESTHINETYSDLKVNKPVFFTETLTPNSTHMAVVQHVDSPGKFWIQTQRYADEFDLLMNGLGNLYSDPTSTESLIRKPVVGLICAAKAQDGVFYRAAVYKVIDKTAEVYFLDYGNTEVVDSFNLRQLPLRFQQLPAVAVKCSLHGVKPRLKLWEERATLFFSKLVRDRIIDLHVQDKQQDTHIVQLVDPSLDGEKDVSKLLCNAGFAVSEKSIVDYSATRSCGLKTTHASGVFLTGTQPQTPCSSSVVMDSASAFKEYLFPIGSSLEVTVSYIENPNDFWCQKARNAACLEVLMQDIQRFYSHSEFEPLLEAACVARHPETGIWYRALVIQKHQTPHVDVLFIDYGQTKKVAIEDLRKITPAFLKMKGQAFRCSLYNLIHPVLHSSSDWSTEATLEFQEFVDAAASMNVPLKCTIFAVMYDSQKVVFNVVDLETPFQSICNLLVQRRLADRAPSKRSPLPPFRLDTYYYSTHGVKTGCDEKVSITCVKGVNQFFCHLARNSDEVEKLAEKVNFLCHQLEATKCPQTFGTVCFAKYTDGLWYRGQIKSTKPSVVINFVDYGDTLEVDKSDLLPVPIEAGDIMSVPVQAIECGLSDMPEELPCEVDNWFRKFADSHCFTALIVAKEPAGKLILELYDGKTQVNALIKQKFHNEIHKNDASTFKIYGLKSRAAESVEASACKKESSTGPKRDAIDQVPKSRESHAIQRSNDVASKQPQSRWGFSTNGRPEPTRDSGTINNCQKQPELRTSQGNLRHPCTSSKPEVVKPKPQALLKESALPIKSIKPGLEAEVFISHCNSPCSFFVQFATDEDDIYSLVEKLNADQSRCRNIDSSDIHEGDLVCAMFPDDSSWYRAVVRKNTNEKIDVEFVDFGNTAVISSKNVCHLGQSFASFPRYSIHCSVHKLNVDSKDQELAPNFKQVLEQNIEKVICTFVKMSGTMWEVRLDVNGVVLGSVCKDHVKPEIAIPDLKDAASEIKVCTYYKNPDISIGQVITGYTSYIKGPQLFWCQYVAMDKLQEISDMLQNIGNASETTLREDCMPVGSACIALFTEDNLWYRAKVTSKDLDTLSITFVDYGNESKVKIGDVKALPPKLSDVPPHAFDCQLEGFDVSEGFWDETADDAFYELVHDKPLNITIEKMGNSEMPHIVKLDCDGVDINTTMKSHWKTRNPETPPAELFNGAEMASDDDYVASKVNIDSVVTFDTDTDPADNETCTSALEMELSEQENLLSSTGVENEAQIDPLKMATENVTLPITESTVLSETHKKLETITEDEPVLGFTGLSDTNQHAVSKETDVGLPQHSEGASSVTIDSFLMNNTDSQLCIVEEPEAPSYEIIQSNLGCLRRATEKKPVGSECVIWSQVRRSWCTARVLKVSEEATLVLLEKYDSEVVVDPINIFEIMPEKPLQIACIEAAIANDDATKETDATLENSASKLYQTEVSDANGIAVALESEDLNGKEETFIDQMAPNDELAGQPQEEESVSCSAFLEDSKAKHMLVEGAQVHDLVQGLCPDDVESKDPQDDLNTSFEEQNDGAKMSTAVDLLLDFLDTAPRDKVQDVSETDALLEEFNIHVTEDLIVLTSDDGAESDTASDGTLHGDAVAMEVGPDTEESSCFQERSNASDCTSAEDSQVTHLTLKVEDASDDVIFVGVLQESQAVVHEPESEKEKRD", "length": 2117 }, "evidence": [ { "id": "I3L8U6", "url": "https://omabrowser.org/oma/group/I3L8U6/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "O60522-1", "protein_name": "Tudor domain-containing protein 6", "gene_name": "TDRD6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MCSTPGMPAPGASLALRVSFVDVHPDVIPVQLWGLVGERRGEYLRLSREIQEAAATRGQWALGSASASPGELCLVQVGLLWHRCRVVSRQAQESRVFLLDEGRTITAGAGSLAPGRREFFNLPSEVLGCVLAGLVPAGCGAGSGEPPQHWPADAVDFLSNLQGKEVHGCVLDVLLLHRLVLLEVPDVFQQMRELGLARRVPDSLFRSLLERYLTAATASVGSGVPVLSRVPLKQKQPGLDYFYPQLQLGVTEAVVITQVCHPHRIHCQLRSVSQEIHRLSESMAQVYRGSTGTGDENSTSATWEEREESPDKPGSPCASCGLDGHWYRALLLETFRPQRCAQVLHVDYGRKELVSCSSLRYLLPEYFRMPVVTYPCALYGLWDGGRGWSRSQVGDLKTLILGKAVNAKIEFYCSFEHVYYVSLYGEDGINLNRVFGVQSCCLADRVLQSQATEEEEPETSQSQSPAEEVDEEISLPALRSIRLKMNAFYDAQVEFVKNPSEFWIRLRKHNVTFSKLMRRMCGFYSSASKLDGVVLKPEPDDLCCVKWKENGYYRAIVTKLDDKSVDVFLVDRGNSENVDWYDVRMLLPQFRQLPILAVKCTLADIWPLGKTWSQEAVSFFKKTVLHKELVIHILDKQDHQYVIEILDESRTGEENISKVIAQAGYAKYQEFETKENILVNAHSPGHVSNHFTTESNKIPFAKTGEGEQKAKRENKTTSVSKALSDTTVVTNGSTELVVQEKVKRASVYFPLMQNCLEIKPGSSSKGELEVGSTVEVRVSYVENPGYFWCQLTRNIQGLKTLMSDIQYYCKNTAAPHQRNTLACLAKRTVNRQWSRALISGIQSVEHVNVTFVDYGDREMVSVKNIYSISEEFLKVKAQAFRCSLYNLIQPVGQNPFVWDVKAIQAFNEFIDNAWQKNLELKCTIFALASINEELFNIVDLLTPFQSACHFLVEKRLARPVKLQKPLESSVQLHSYFYSTHDMKIGSEELVYITHIDDPWTFYCQLARNANILEQLSCSITQLSKVLLNLKTSPLNPGTLCLAKYTDGNWYRGIVIEKEPKKVFFVDFGNIYVVTSDDLLPIPSDAYDVLLLPMQAVRCSLSDIPDHIPEEVVVWFQETILDKSLKALVVAKDPDGTLIIELYGDNIQISASINKKLGLLSYKDRIRKKESEVLCSTTETLEEKNENMKLPCTEYLSKSVGYKLPNKEILEESYKPQINSSYKELKLLQSLTKTNLVTQYQDSVGNKNSQVFPLTTEKKEEISAETPLKTARVEATLSERKIGDSCDKDLPLKFCEFPQKTIMPGFKTTVYVSHINDLSDFYVQLIEDEAEISHLSERLNSVKTRPEYYVGPPLQRGDMICAVFPEDNLWYRAVIKEQQPNDLLSVQFIDYGNVSVVHTNKIGRLDLVNAILPGLCIHCSLQGFEVPDNKNSKKMMHYFSQRTSEAAIRCEFVKFQDRWEVILADEHGIIADDMISRYALSEKSQVELSTQVIKSASSKSVNKSDIDTSVFLNWYNPEKKMIRAYATVIDGPEYFWCQFADTEKLQCLEVEVQTAGEQVADRRNCIPCPYIGDPCIVRYREDGHYYRALITNICEDYLVSVRLVDFGNIEDCVDPKALWAIPSELLSVPMQAFPCCLSGFNISEGLCSQEGNDYFYEIITEDVLEITILEIRRDVCDIPLAIVDLKSKGKSINEKMEKYSKTGIKSALPYENIDSEIKQTLGSYNLDVGLKKLSNKAVQNKIYMEQQTDELAEITEKDVNIIGTKPSNFRDPKTDNICEGFENPCKDKIDTEELEGELECHLVDKAEFDDKYLITGFNTLLPHANETKEILELNSLEVPLSPDDESKEFLELESIELQNSLVVDEEKGELSPVPPNVPLSQECVTKGAMELFTLQLPLSCEAEKQPELELPTAQLPLDDKMDPLSLGVSQKAQESMCTEDMRKSSCVESFDDQRRMSLHLHGADCDPKTQNEMNICEEEFVEYKNRDAISALMPLFSEEESSDGSKHNNGLPDHISAQLQNTYTLKAFTVGSKCVVWSSLRNTWSKCEILETAEEGTRVLNLSNGMEEIVNPENVWNGIPKLDKSPPEKRGLEVMEI", "length": 2096 }, "evidence": [ { "id": "I3L8U6", "url": "https://omabrowser.org/oma/group/I3L8U6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "P granule organization", "id": "GO:0030719", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030719", "evidence": [ { "database": "UniProtKB", "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" } ], "pmid": "" }, { "name": "spermatogenesis", "id": "GO:0007283", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007283", "evidence": [ { "database": "UniProtKB", "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" } ], "pmid": "" }, { "name": "piRNA processing", "id": "GO:0034587", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034587", "evidence": [ { "database": "UniProtKB", "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "P granule", "id": "GO:0043186", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043186", "evidence": [ { "database": "UniProtKB", "id": "I3L8U6", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1157, "end_pos": 1159, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1169, "end_pos": 1171, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1392, "end_pos": 1394, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1640, "end_pos": 1642, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2006, "end_pos": 2008, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2059, "end_pos": 2061, "annotation": "n_glycosylation_sequon" }, { "start_pos": 298, "end_pos": 300, "annotation": "n_glycosylation_sequon" }, { "start_pos": 619, "end_pos": 621, "annotation": "n_glycosylation_sequon" }, { "start_pos": 663, "end_pos": 665, "annotation": "n_glycosylation_sequon" }, { "start_pos": 684, "end_pos": 686, "annotation": "n_glycosylation_sequon" }, { "start_pos": 738, "end_pos": 740, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L8U6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8U6" }, { "id": "PS50304", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50304" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Tudor", "eco_id": "ECO_0000259", "start_pos": 311, "end_pos": 370, "start_aa": "Pro", "end_aa": "Met", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 9, 107 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1157, "end_pos": 1159 }, { "start_pos": 1169, "end_pos": 1171 }, { "start_pos": 1392, "end_pos": 1394 }, { "start_pos": 1640, "end_pos": 1642 }, { "start_pos": 2006, "end_pos": 2008 }, { "start_pos": 2059, "end_pos": 2061 }, { "start_pos": 298, "end_pos": 300 }, { "start_pos": 619, "end_pos": 621 }, { "start_pos": 663, "end_pos": 665 }, { "start_pos": 684, "end_pos": 686 }, { "start_pos": 738, "end_pos": 740 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8W7-1", "uniprot_ac": "I3L8W7", "uniprot_id": "I3L8W7_PIG", "mass": { "chemical_mass": 69928.0, "monoisotopic_mass": 69928.0 }, "refseq": {}, "gene_names": [ { "name": "ZNF180", "type": "recommended", "evidence": [ { "id": "I3L8W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ] } ], "protein_names": [ { "name": "Zinc finger protein 180", "type": "synonym", "evidence": [ { "id": "I3L8W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8W7/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF180", "url": "https://www.uniprot.org/uniprotkb/I3L8W7", "locus": { "chromosome": "6", "start_pos": 50987467, "end_pos": 51008479, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026699", "url": "https://www.ensembl.org/id/ENSSSCG00000026699" } ] } } ], "crossref": [ { "id": "I3L8W7", "url": "https://alphafold.ebi.ac.uk/entry/I3L8W7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026699", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026699", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd07765", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd07765", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR001909", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001909", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036051", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036051", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ISHERAC", "url": "https://omabrowser.org/oma/group/ISHERAC/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24381", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24381", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24381:SF27", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24381:SF27", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01352", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01352", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-212436", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8W7-1", "url": "https://www.uniprot.org/uniprotkb/I3L8W7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEQDEKPPGPLKACAQDSLLPQEIIVKVERDDAGSLAVPSQEGVNFRIVTVDFTQEEEGTLNTAQRALDRDVILEDHRDIVSWESVTALGKRESTSKQSIVDDEPSRRVKIERLTRDSSWLSSCEEVRDCEEQLEKQQEKQGRLLKEVTFTHKKAITYERSSKSDDLEEKGGLNSSLLSPQMIPIRNHFHKRASHIKKLHYNSMVNDHQMINDSEKVCENNECGGNLPQSIHFIQFTRTQTEDKAYGFSDSIQPFSHCTPLDIHEKICAQGRSFDFKDCGQVLNHSVSCNEQQRISIEESQFKCSKTSQSSSPAQNMRNRSEEKPFECNQCGKSFSWSSHLVAHQRTHTGEKPYECNECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKPYECNQCGKSFRQSYKLIAHQRTHTGEKPMNVVSVENHLFRAINLLPIKEFILEKSPMNAINVESLLVRVTNSLPIRELTQEKNPLNVISVENLSAGVLNLLHTKELILERNPMNVMSVGNLSTAVLTLLCIKELILEKSPMNVISVGNPSARVMFLLYIRELILEKSPMSAVSVGSHSGRVHALLNIRELILERNPMNVISVGKRSV", "length": 617, "header": "tr|I3L8W7-1|I3L8W7_PIG Isoform 1 of Zinc finger protein 180 OS=Sus scrofa OX=9823 GN=ZNF180 PE=3 SV=2 CANONICAL=I3L8W7-1" }, "isoforms": [ { "isoform_ac": "I3L8W7-1", "url": "https://www.uniprot.org/uniprotkb/I3L8W7/entry#I3L8W7-1", "sequence": { "sequence": "MEEQDEKPPGPLKACAQDSLLPQEIIVKVERDDAGSLAVPSQEGVNFRIVTVDFTQEEEGTLNTAQRALDRDVILEDHRDIVSWESVTALGKRESTSKQSIVDDEPSRRVKIERLTRDSSWLSSCEEVRDCEEQLEKQQEKQGRLLKEVTFTHKKAITYERSSKSDDLEEKGGLNSSLLSPQMIPIRNHFHKRASHIKKLHYNSMVNDHQMINDSEKVCENNECGGNLPQSIHFIQFTRTQTEDKAYGFSDSIQPFSHCTPLDIHEKICAQGRSFDFKDCGQVLNHSVSCNEQQRISIEESQFKCSKTSQSSSPAQNMRNRSEEKPFECNQCGKSFSWSSHLVAHQRTHTGEKPYECNECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKPYECNQCGKSFRQSYKLIAHQRTHTGEKPMNVVSVENHLFRAINLLPIKEFILEKSPMNAINVESLLVRVTNSLPIRELTQEKNPLNVISVENLSAGVLNLLHTKELILERNPMNVMSVGNLSTAVLTLLCIKELILEKSPMNVISVGNPSARVMFLLYIRELILEKSPMSAVSVGSHSGRVHALLNIRELILERNPMNVISVGKRSV", "length": 617, "header": "tr|I3L8W7-1|I3L8W7_PIG Isoform 1 of Zinc finger protein 180 OS=Sus scrofa OX=9823 GN=ZNF180 PE=3 SV=2 CANONICAL=I3L8W7-1" }, "locus": { "chromosome": "6", "start_pos": 51005376, "end_pos": 50988083, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030226.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030226.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020478.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020478.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-212436", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-212436", "resource": "Reactome", "description": "Generic Transcription Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "G3HYX5-1", "protein_name": "Zinc finger protein 180 isoform X2", "gene_name": "Znf180", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEQQDDESLESPQACVENFVLPQEMIVEVEGEDAGSLDTMPQESTDFKIVTVDLTEEEQSTWHNAQRTPERSVVLEGHRDLWDLPAVHGIEETTPKHTVFDEETSHGVKIEGLAREDPWLPSCEEASKEQLEKQQEKQEEEAFPQARAGTPETIYRSDELDRNCLSSSRHSFPMIPLRHHFHKQASHVKKVHGDTVANSHQKSSDNADLSKDEKCRNVPQNIHLSQFARTPKGDKSYEFNGHVPSFGRGTPLNLHEKVHIEGKSFGFKGHGHVLNHDISLNEQQRILVKEGQYKCSKTASSPSPPQNMRNYSEEKRFECKYCGKSFSWSSHLIAHQRTHTGEKPYKCNLCGKFFTRSSHVVSHQRIHTGEKPYRCNLCGKSFTQRYVLVVHQRTHTGERPYECSECGKSFRQSYKLIAHQRTHTGEKPYECTQCGKSFIQSYKLIAHQKIHSGEKPYECNHCGKSFSQSYKLVAHQRTHTGEKPFECNYCGKSFSWSSQLVSHQRTHTGEKPYECSECGKSFNRSSHLVMHQRTHTGEKPYQCKQCGKSFSQSYVLVVHQRTHTGEKPYECSQCGKTFRQSSCFTQHQRTHTGEKPYECNQCGKTFSLSARLIVHQRTHTGEKPYKCNQCGKAFISSSKRSRHQATHSDESCKS", "length": 654 }, "evidence": [ { "id": "I3L8W7", "url": "https://omabrowser.org/oma/group/I3L8W7/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q9UJW8-1", "protein_name": "Zinc finger protein 180", "gene_name": "ZNF180", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRACAGSTREAGSGAQDLSTLLCLEESMEEQDEKPPEPPKVCAQDSFLPQEIIIKVEGEDTGSLTIPSQEGVNFKIVTVDFTREEQGTCNPAQRTLDRDVILENHRDLVSWDLATAVGKKDSTSKQRIFDEEPANGVKIERFTRDDPWLSSCEEVDDCKDQLEKQQEKQEILLQEVAFTQRKAVIHERVCKSDETGEKSGLNSSLFSSPVIPIRNHFHKHVSHAKKWHLNAAVNSHQKINENETLYENNECGKPPQSIHLIQFTRTQTKDKSYGFSDRIQSFCHGTPLHIHEKIHGGGKTFDFKECGQVLNPKISHNEQQRIPFEESQYKCSETSHSSSLTQNMRNNSEEKPFECNQCGKSFSWSSHLVAHQRTHTGEKPYECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKPYECNQCGKSFRQSYKLIAHQRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPYECNQCGKSFSQSYKLVAHQRTHTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKPYECSECGKSFNRSSHLVMHQRIHTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKPYECSQCGKSFRQSSCLTQHQRTHTGEKPFECNQCGKTFSLSARLIVHQRTHTGEKPFTCIQCGKAFINSYKLIRHQATHTEEKLYECN", "length": 692 }, "evidence": [ { "id": "I3L8W7", "url": "https://omabrowser.org/oma/group/I3L8W7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "DNA-templated transcription", "id": "GO:0006351", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006351", "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "pmid": "" }, { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "pmid": "" }, { "name": "RNA polymerase II transcription regulatory region sequence-specific DNA binding", "id": "GO:0000977", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000977", "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "pmid": "" }, { "name": "DNA-binding transcription factor activity, RNA polymerase II-specific", "id": "GO:0000981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000981", "evidence": [ { "database": "UniProtKB", "id": "I3L8W7", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 175, "end_pos": 177, "annotation": "n_glycosylation_sequon" }, { "start_pos": 213, "end_pos": 215, "annotation": "n_glycosylation_sequon" }, { "start_pos": 285, "end_pos": 287, "annotation": "n_glycosylation_sequon" }, { "start_pos": 320, "end_pos": 322, "annotation": "n_glycosylation_sequon" }, { "start_pos": 502, "end_pos": 504, "annotation": "n_glycosylation_sequon" }, { "start_pos": 530, "end_pos": 532, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L8W7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 617, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L8W7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L8W7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L8W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" }, { "id": "PS50157", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50157" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C2H2-type", "eco_id": "ECO_0000259", "start_pos": 327, "end_pos": 354, "start_aa": "Phe", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L8W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8W7" }, { "id": "PS50805", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50805" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "KRAB", "eco_id": "ECO_0000259", "start_pos": 45, "end_pos": 118, "start_aa": "Val", "end_aa": "Asp", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 175, "end_pos": 177 }, { "start_pos": 213, "end_pos": 215 }, { "start_pos": 285, "end_pos": 287 }, { "start_pos": 320, "end_pos": 322 }, { "start_pos": 502, "end_pos": 504 }, { "start_pos": 530, "end_pos": 532 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8Y1-1", "uniprot_ac": "I3L8Y1", "uniprot_id": "I3L8Y1_PIG", "mass": { "chemical_mass": 52716.0, "monoisotopic_mass": 52716.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "Tripartite motif-containing protein 43-like", "type": "recommended", "evidence": [ { "id": "I3L8Y1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1", "locus": {} } ], "crossref": [ { "id": "I3L8Y1", "url": "https://alphafold.ebi.ac.uk/entry/I3L8Y1", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028810", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028810", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19783", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19783", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR000315", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000315", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001841", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001841", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001870", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001870", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003877", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003877", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003879", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003879", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013083", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013083", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017907", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017907", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050143", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050143", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "NCPACSE", "url": "https://omabrowser.org/oma/group/NCPACSE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24103", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24103", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00622", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00622", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00643", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00643", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF15227", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15227", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8Y1-1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASDIPAAFQKELTCLVCLNYLLDPVTLGCGHSFCWCCLCVFWDQAEEPARCPVCRQQSEQTNLKTNLLLKNLVSIARNANLFQFLKSEEQWCGTHKEIKEIFCDADKSLLCLLCSQTDEHGDHRHLPTEEAAEEYWERLANQMRSLWEKIQEIDRSLQKNSQGTDSLMFYAYQRGDMMRKVYQMVPPLFQEEEIYYFDGIIKEGQKFYKLIQKRQEEMIGKKTVLRKIYKELMNMCNKPDVELLQELGDKLMRSEAAQLHIPRPLLPELHARPMSGLMDWLNHFKVKISFSNEVSNQHIRVFDDVRSLKYRDDGLYVSLDASPSKYFAAWGTRAFTSGKQYWEVDVDSSWDWAVGVCRDSWLRKFDGLLSDSNRDSFLLVCVKEDNHYRLWATAPTTPLYIQKPVGRVGMFLDFHTGSLSFVDVARRSLIWRYEDGVFTFPVKPFTCTGHL", "length": 452, "header": "tr|I3L8Y1-1|I3L8Y1_PIG Isoform 1 of Tripartite motif-containing protein 43-like OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=I3L8Y1-1" }, "isoforms": [ { "isoform_ac": "I3L8Y1-1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1/entry#I3L8Y1-1", "sequence": { "sequence": "MASDIPAAFQKELTCLVCLNYLLDPVTLGCGHSFCWCCLCVFWDQAEEPARCPVCRQQSEQTNLKTNLLLKNLVSIARNANLFQFLKSEEQWCGTHKEIKEIFCDADKSLLCLLCSQTDEHGDHRHLPTEEAAEEYWERLANQMRSLWEKIQEIDRSLQKNSQGTDSLMFYAYQRGDMMRKVYQMVPPLFQEEEIYYFDGIIKEGQKFYKLIQKRQEEMIGKKTVLRKIYKELMNMCNKPDVELLQELGDKLMRSEAAQLHIPRPLLPELHARPMSGLMDWLNHFKVKISFSNEVSNQHIRVFDDVRSLKYRDDGLYVSLDASPSKYFAAWGTRAFTSGKQYWEVDVDSSWDWAVGVCRDSWLRKFDGLLSDSNRDSFLLVCVKEDNHYRLWATAPTTPLYIQKPVGRVGMFLDFHTGSLSFVDVARRSLIWRYEDGVFTFPVKPFTCTGHL", "length": 452, "header": "tr|I3L8Y1-1|I3L8Y1_PIG Isoform 1 of Tripartite motif-containing protein 43-like OS=Sus scrofa OX=9823 GN= PE=4 SV=2 CANONICAL=I3L8Y1-1" }, "locus": { "chromosome": "9", "start_pos": 22971399, "end_pos": 22965658, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030083.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030083.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020492.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020492.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A6NCK2-1", "protein_name": "Tripartite motif-containing protein 43B", "gene_name": "TRIM43B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDSDFSHAFQKELTCVICLNYLVDPVTICCGHSFCRPCLCLSWEEAQSPANCPACREPSPKMDFKTNILLKNLVTIARKASLWQFLSSEKQICGTHRQTKKMFCDMDKSLLCLLCSNSQEHGAHKHYPIEEAAEEDREKLLKQMRILWKKIQENQRNLYEERRTAFLLRGDVVLRAQMIRNEYRKLHPVLHKEEKQHLERLNKEYQEIFQQLQRSWVKMDQKSKHLKEMYQELMEMCHKPEVELLQDLGDIVARSESVLLHMPQPVNPELTAGPITGLVYRLNRFRVEISFHFEVTNHNIRLFEDVRSWMFRRGPLNSDRSDYFAAWGARVFSFGKHYWELDVDNSCDWALGVCNNSWIRKNSTMVNSEDIFLLLCLKVDNHFNLLTTSPVFPHYIEKPLGRVGVFLDFESGSVSFLNVTKSSLIWSYPAGSLTFPVRPFFYTGHR", "length": 446 }, "evidence": [ { "id": "I3L8Y1", "url": "https://omabrowser.org/oma/group/I3L8Y1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P86449-1", "protein_name": "Tripartite motif-containing protein 43C", "gene_name": "Trim43c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESDNLQDPQEETLTCSICQGIFMDPVYLRCGHKFCETCLLLFQEDIKFPAYCPTCRQPCNQRYINDISLKKQVFIVRKKRLMEYLNSEEHKCVTHKAKKMIFCDKSKILLCHLCSDSQEHSGHTHCSIDVAVQEKMEELLKHMDSLWQRLKIQQNYVEKERRMTLWWLKSVKLREEVIKRVYGKQCPPLSEERDQHIECLRHQSNTTLEELRKSEATIVHERNQLTEVYQELMTMSQRPYQELLVQDLDDLFRRSKLAAKVDMPQGMIPRLRAHSIPGLTARLNSFRVKISFKHSIMFGYNSVRPFDIRLLHESTSLDSAKTHRVSWGKKSFSRGKYYWEVDLKDYRRWTVGVCKDPWLRGRSYVVTPTDIFLLECLRNKDHYILITRIGREHYIEKPVGQVGVFLDCEGGYVSFVDVAKSSLILSYSPGTFHCAVRPFFFAAYT", "length": 446 }, "evidence": [ { "id": "I3L8Y1", "url": "https://omabrowser.org/oma/group/I3L8Y1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" } ], "pmid": "" }, { "name": "ubiquitin protein ligase activity", "id": "GO:0061630", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061630", "evidence": [ { "database": "UniProtKB", "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" } ], "pmid": "" }, { "name": "regulation of gene expression", "id": "GO:0010468", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010468", "evidence": [ { "database": "UniProtKB", "id": "I3L8Y1", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L8Y1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 452, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L8Y1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L8Y1" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L8Y1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" }, { "id": "PS50119", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50119" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "B box-type", "eco_id": "ECO_0000259", "start_pos": 88, "end_pos": 129, "start_aa": "Ser", "end_aa": "Thr", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L8Y1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" }, { "id": "PS50188", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50188" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "B30.2/SPRY", "eco_id": "ECO_0000259", "start_pos": 269, "end_pos": 452, "start_aa": "Glu", "end_aa": "Leu", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3L8Y1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Y1" }, { "id": "PS50089", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50089" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RING-type", "eco_id": "ECO_0000259", "start_pos": 15, "end_pos": 56, "start_aa": "Cys", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L8Z8-1", "uniprot_ac": "I3L8Z8", "uniprot_id": "I3L8Z8_PIG", "mass": { "chemical_mass": 89600.0, "monoisotopic_mass": 89600.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100514982", "type": "recommended", "evidence": [ { "id": "I3L8Z8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8" } ] } ], "protein_names": [ { "name": "LRRC37A/B like protein 1 C-terminal domain-containing protein", "type": "recommended", "evidence": [ { "id": "I3L8Z8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L8Z8", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100514982", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8", "locus": {} } ], "crossref": [ { "id": "I3L8Z8", "url": "https://alphafold.ebi.ac.uk/entry/I3L8Z8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028962", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028962", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR015753", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015753", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029423", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029423", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CANTCTA", "url": "https://omabrowser.org/oma/group/CANTCTA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR23045", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23045", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23045:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23045:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14914", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14914", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L8Z8", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L8Z8-1", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799, "header": "tr|I3L8Z8-1|I3L8Z8_PIG Isoform 1 of LRRC37A/B like protein 1 C-terminal domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100514982 PE=1 SV=3 CANONICAL=I3L8Z8-1" }, "isoforms": [ { "isoform_ac": "I3L8Z8-1", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8/entry#I3L8Z8-1", "sequence": { "sequence": "MMTLELEKLILPSHMACCLCQFKSNIEVVCKTVKLHCDRCLKNSTRCDKETSLGDVEGSFMKVLQARKKNTSTELMIEPERPSSDKSGVSLSSFMNEQLDFSDESDVISALNYILPYFSEGNLEDVESTLLPFIQLLFSNVAEADIPPGHLKTHTGNPPVNPESGTSGYTNKLRQLRFLENLLDAEIQEKIDEVMKKEKTAMLIYSNILSPKLRRQILRKKLETARTQAESLEEIESVDKRPLKVNRVLKGPRGIKKRHFRAMRRQSIRRKETAQPFVETTTKGSKLGGPSARELEQLWVVQRPRKRVADSLQKEPSFGREHKAEVSSFLKQYSRGRPAASIHPKAPATVKKTSEDLSDTLFVLVDANARVKNRKASETISYPRKIDSFHPSHSPVLHRTPEPQNRQAFRDKGSSYRLLLALRPLSSAVRSLINSPSQEASSPSGELTLQEQPSPESFSPSEPSTEHIISEKDTPQVVFEELPTSGTTTLSGPIPGPTAQGTLPTEYSATTADNVMPTGQHTSAIQWEHHNVGTDVASTPTSFISPGVSSPGSQFEAQLNQQLQSLIPNNDVRRLISHVIRTLKMDCSEPQVQLACAKLISRTGLLMKLLSEQQEAKASKAEWDTDQWKTENYINENTEAQGEQKESSELTKDVPGYGYNNKLILAISVAVVLMLLIVILCLIEVYSRRRTLREGKVGRRRGFFGFLLRKRRSGESESEGFFWRRRPLWLRDTYRPLSATRKKNMAEKLHDKESSDEEEIFHKGAGEVSEAPADVILTIESDVEDLGEETDTAPEGPPE", "length": 799, "header": "tr|I3L8Z8-1|I3L8Z8_PIG Isoform 1 of LRRC37A/B like protein 1 C-terminal domain-containing protein OS=Sus scrofa OX=9823 GN=LOC100514982 PE=1 SV=3 CANONICAL=I3L8Z8-1" }, "locus": { "chromosome": "12", "start_pos": 26606480, "end_pos": 26596037, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022259.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022259.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020509.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020509.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 498, "start_aa": "Thr", "end_pos": 498, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr498", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L8Z8", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A075B5S0-1", "protein_name": "Immunoglobulin heavy variable 16-1", "gene_name": "Ighv16-1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "EVQLVESGGSLGQPGGSTKLSCEEASGFTFSDHWMDWFRQAPGMRLEWLANTNHDESGKGYAESVKDRFSISRDNSENLLYLQMNSLRNEDTALYYCAR", "length": 99 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B603-1", "protein_name": "T cell receptor alpha variable 6D-6", "gene_name": "Trav6-6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSPGFVAVILLILGRTHGDSVTQTEGPVTVSESESLIINCTYSATSIAYPNLFWYVRYPGEGLQLLLKVITAGQKGSSRGFEATYNKETTSFHLQKASVQESDSAVYYCALG", "length": 114 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B625-1", "protein_name": "T cell receptor alpha variable 4N-3", "gene_name": "Trav4n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERNLGAVLGILWVQICWVSGDKVKQSPSALSLQEGTNSALRCNFSIAATTVQWFLQNPRGSLMNLFYLVPGTKENGRLKSAFDSKESYSTLHIRDAQLEDSGTYFCAAE", "length": 110 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B695-1", "protein_name": "T cell receptor alpha variable 9D-3", "gene_name": "Trav9d-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLALLPVLGIHFLLRDAQAQSVTQPDARVTVSEGASLQLRCKYSYFGTPYLFWYVQYPRQGLQLLLKYYPGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDWAVYFCAVS", "length": 113 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6B4-1", "protein_name": "T cell receptor alpha variable 6-4", "gene_name": "Trav6-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTSPVLVTVMLLFMLGMRKTHGDSVTQKQGQVTLSEDDFLFINCTYSTTTYPTLLWYVQYLGQGPQLLLKVTTANNKGISRGFEATYDKGTTSFHLQKASVQESDSAVYFCALV", "length": 115 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B6D8-1", "protein_name": "T cell receptor alpha variable 3-3", "gene_name": "Trav3-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "GEQVEQRPPHLSVREGDSAVITCTYTDPNSYYFFWYKQEPGASLQLLMKVFSSTEINEGQGFTVLLNKKDKRLSLNLTAAHPGDSAAYFCAV", "length": 92 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A075B759-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4E", "gene_name": "PPIAL4E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A075B767-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4H", "gene_name": "PPIAL4H", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFDITVDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTDDKSIYGEKFDDENLIRKHTGSGILSMVNAGPNTNGSQLFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WP50-1", "protein_name": "Secretoglobin, family 1B, member 15", "gene_name": "Scgb1b17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMLAGAVVIFGVALLLLSSWGDCGICPAMKEDVHLFLNGTSEEYVEYVKQYKDDPEILENTEKIKQCVDSTLMEEDKAHANGFIEKIEASPLC", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPA9-1", "protein_name": "Secretoglobin, family 2B, member 18", "gene_name": "Scgb2b18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQSCYSEERIRNILLEPKIMEAMVASPECRSYHSFNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPG5-1", "protein_name": "Predicted gene 13283", "gene_name": "Gm13283", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLADLRSVPGHQCLRDRTDFPCPWKEGTNITQMTLGETTSCYSQSLRQVLHRFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WPY7-1", "protein_name": "RNA binding motif protein Y-linked family member 4", "gene_name": "Rbmyf4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKR", "length": 166 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQA9-1", "protein_name": "Secretoglobin, family 2B, member 21", "gene_name": "Scgb2b21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACVPFFEGYASVVSGSRVWMYQEFQAFDATAEEKVALEKIQGCYREESLRNILLEPKIMEAMVASPECLSYYSSNNIRCILDLLSKLLGQ", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQJ0-1", "protein_name": "Secretoglobin, family 1B, member 11", "gene_name": "Scgb1b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLVAAVVILGAALLLLTSGGDCGICPAIKEDVRLFLNGTSEEYVEYVKQYKDDPVILENTAKINQCVDSTLTEKDMTHTTTFLKKIEDSLLC", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WQP8-1", "protein_name": "Predicted gene, 21698", "gene_name": "Gm21698", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHGQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR36-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r90", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNEAMKTTEEVALQIVLLCQFGIGTMANILLFIHNFSPLLTGCQLRPKQVICTNMAVSSILILFMTVFPNNVFVVQRNLMNDLQCKLEYFLRMVARSINLCSTCVLSTYQFVTLLPGNFGEMMVRGRRSKVISYSCCSCWLFGVLYNVYIPMKVSGPQNTHNKTDIKSKWFCVTSGFSVGIMFLWFAHDAIFISIMIWTSVSMVLLLYRHYQRLQYIFPPHQGTRGYAEIRAAHSIAMLVVTFVSFYLLHCICFILHIVFVDSRLWLRHVGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYRKPVI", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR44-1", "protein_name": "BTB domain containing 35, family member 15", "gene_name": "Btbd35f15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WR49-1", "protein_name": "Secretoglobin, family 2B, member 11", "gene_name": "Scgb2b11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTSEACVSFFEGYASVLSGSRVWLYQELQAFDATAEEKVALEKIQGCYSEERIRNILLEPKIMEAMVASPECRSYHSLNNFRSILEFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSM5-1", "protein_name": "Predicted gene 29049", "gene_name": "Gm29049", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTSLKKKSRRKPSSQALGNIVGCRISYGWKEGNEPVTHWKAIILGQLPTNPSLYLVKYDGIDSVYGQELHSDERILNLKVLPHKVVFLQVRDVHLASALVCREVQHKFEGKDGSEDNWSGMVLAQVPFLQDYFYISYKKDPVLYVYQLLDDYKEGNLHIIPETPLAEARSGDDNDFLIGSWVQYTRDDGSKKFGKVVYKVLANSTVYCIKFLGDLHIYVYTLVSNIT", "length": 227 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WSN2-1", "protein_name": "BTB domain containing 35, family member 16", "gene_name": "Btbd35f16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLLFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLNFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A087WUL8-1", "protein_name": "NBPF family member NBPF19", "gene_name": "NBPF19", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRNLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLFHSQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELVEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSIPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQCVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLAEKEPEVLQDPLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDGCYSTPSMYFELPDSFQHYRSVFYSFEEEHISFALYLDNRFFTLTVTSLHLVFQMLVIFPQ", "length": 3843 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087WXS9-1", "protein_name": "TBC1 domain family member 3I", "gene_name": "TBC1D3I", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKMKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A087X179-1", "protein_name": "TBC1 domain family member 3E", "gene_name": "TBC1D3E", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDQAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0A0MQP3-1", "protein_name": "BTB domain containing 35, family member 12", "gene_name": "Btbd35f12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDSDLSITPLEVPQGLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YW58-1", "protein_name": "Immunoglobulin heavy variable V8-2", "gene_name": "Ighv8-2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGRLTFSFLLLLPVPAYVLSQVTLKVSGPGILQPSQTLSLACTFSGISLSTSGMGLSWLRKPSGKALEWLASIWNNDNYYNPSLKSRLTISKETSNYQVFLKLTSVDTADSATYYGAWR", "length": 119 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXW2-1", "protein_name": "Predicted gene, 20773", "gene_name": "Gm20773", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKIFKVEKS", "length": 232 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0A6YXX7-1", "protein_name": "Predicted gene, 20807", "gene_name": "Gm20807", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVGCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHTFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKVLEVEKS", "length": 232 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0B4J1J8-1", "protein_name": "T cell receptor gamma, variable 4", "gene_name": "Trgv4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNPGSQALLPLYLPWEANLADENPLLKVVIFLCLLTFGHGKLEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYG", "length": 138 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JE01-1", "protein_name": "Predicted gene, 21663", "gene_name": "Gm21663", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADPPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JGR8-1", "protein_name": "Predicted gene, 21680", "gene_name": "Gm21680", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPSESNEGRRRWTWRMWMAHRQTTSPVPVTSKKQFEKEEKELIKKIQLTTKEINELRDRLIYVTKGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELVLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A0G2JMD5-1", "protein_name": "PRAME family member 33", "gene_name": "PRAMEF33", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSLQAPSRLLELAGQSLLRNQFLTIFTLDELPREVFPLMFMEAFSMRRFEALKLMVQAWPFLRLPLGSLMKTPHLETLQAVLRGLDTLVAQKVRPRRWKLQVLDLQDVDENFWTIWSGARVLSCSPEAMSKRQTVEDCPRMGEHQPLKVFIDLCLKESTLDECLSYLFGWIHYRRGLVHLCCSKVQNYSMPTSSFRNLLERIYPDSIQELEVWKKCSLNKTGKFAPYLSQMSNLRELFLAFGYERELYVSVQWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEHLLRYLKNPLGAFIFSDAYLADRDMECLSQYPSLSQLKELRLIHILMWTTNLQPLGALLEKVAATLKTLVLKDCRIQDPQLRVLLPALSHCSQLTTFNFHGNETSMNALKDLLRHTRGLSKLGLELYPAPLESLDYKGHVNWEILTPIRAELMRTLREVRQPKRIFFGPVPCPTCGSWPSEKVDFHLCS", "length": 474 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JNH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC124905359", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKIANNTVVTEFILLGLTQSQDIQLLVFVLILIFYLIILPGNFLIIFTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFFSEKKVISYRGCITQLFFLHFLGGGEGLLLVVMAFDRYIAICRPLHCSTVMNPRACYAMMLALWLGGFVHSIIQVVLILRLPFCGPNQLDNFFCDVRQVIKLACTDMFVVELLMVFNSGLMTLLCFLGLLASYAVILCHVRRAASEGKNKAMSMCTTRVIIILLMFGPAIFIYMCPFRALPADKMVSLFHTVIFPLMNPMIYTLRNQEVKTSMKRLLSRHVVCQVDFIIRN", "length": 316 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A0G2JTV6-1", "protein_name": "RIKEN cDNA 4931429L15 gene like", "gene_name": "4931429L15Rikl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQFNPFSQDTWRHGHRRAYSNISERLSCLTLQEPSVSHLYQIFSPGDRRSYLLDDSLSNSIQRESLAVPMGLEDSGSRGQQKQQQPGAVLEDLEEQEIAPTDVKYRLQLLDEAPLRSKSSSVQSQGHKPGWIPSSKTHREWFKPWKMDMTYPENERSHSGHTQGRRMTPRAQWRHVEYDSQDQDTQSPVWSQALFPGLDKSSQGVIQCTQHVSREREMVSGWSMTHAPQEMGQAKQGPAFLKTKGTAKFNVATTARMSCLPPLKLLEKKVKSRCPPNTPGIFQDWRAQPQGLYGSDERLLAPFEDQVNTRVTYMPLFTEKVKFVSPKTAVSNPKQTHSQLSRTNQPAFPGQFRNWTSGREHLEKGLPE", "length": 368 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JVP7-1", "protein_name": "40S ribosomal protein S26", "gene_name": "Rps26-ps4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKKRRNNGRTKKGRGHVQPIGCANCSWCVPKDKAIKKFVIWNIVETAAVRDISEARIFDAYVLPKLYVKLHYCVSLAIHSKVIRNQSHEARKDRTSPPRFRPAGAAPRPPPKPM", "length": 115 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW93-1", "protein_name": "High mobility group protein B4", "gene_name": "Hmgb4l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGKDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLLFSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAYYHQCQRGE", "length": 168 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JW96-1", "protein_name": "Zinc finger protein 94 like 1", "gene_name": "Zfp94l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLPRGSCDVMLESLRNVASLGHRIGTPDGLLRLKREDMFWLLTVARWSSGSMGDKNLEDMEFLEEVGLRHLPHEELFCSQIWQRITRELTKVRDCRVRVGENGSPMKRDNREDEYSKHSSQNSVFQVHHRECHEEEANERDFGCSHHLRTSTGEKSYKCEKCHNASHWFSSLQSHQGVCDRPRWNKSVSQFKIFRQWPLFHYQQSMPNGENAQEYEACGNAGKNSSGQTALFVHTAEEPYSCEECGARFSQSSYLQVHQRVHTGEKPYKCEECGKGFGWLSQLHAHHQSHTGEKPYTCDACGKGFSYSSHLNIHCRIHTGEKPYQCEECGKGFSQASNLLAHQRGHTGEKPYQCDACGKGFSRISDFNIHIRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCNTCGKSFRRSSDLNVHCRIHTGEKPYRCEKCDKVFSQFSSLQVHQRVHTGEKPYQCSECGKGFSVGSQLQAHQRCHTGERPYQCEECGKGFCRASNFLAHHGVHTGEKPYRCDMCGKHFRQRSYLQAHHRVHTGEKQFRCEECGKGFSWSSYLQAHQRVHMGEKPYKCEECGKGFSWSSSLLTHQRVHAEDEGQKDLSSSGGSYRK", "length": 616 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2JYP5-1", "protein_name": "Olfactory receptor", "gene_name": "Or8g52b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEGNHSRVTEFILTGLTDKPELQLPLFLLFLGIYLLTVLGNLGMIILILLSSHLQTPMYFFLSGLSFIDLGYSTVIIPKMLVNFVTEKNVISYPGCMTQLYCFIAFVLCECYMLSAMAFDRYVAICNPLRYNVTMSYQVCFWMIGGVYSIGFIEATIHTVCMLQVFFCKANVVNHFFCDLLPLFQLACSSTFVNETVLLCLSTLNFCVPTLTILSSYSFIIARIIRIKSTESRFKAFSTCSSHFSSVAVFFGSLGFVYFQPSSVSSKDQGKVSSVFYTIIVPMLNPLIYSLRNKDVKLALNKLFQKKIFHM", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K381-1", "protein_name": "Killer cell lectin-like receptor, subfamily A, member 4", "gene_name": "Klra4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQEVTYSTLRFHNSSGLQNQVKTNETQGPRETGHRGCSVSWHLIMIPLGILCSILLVTVAVLVTHIFQYSQEKHELQEALNKLHHNYSTMQNESYLNEEMLGNKSSECDAYKSVLDSLNRQQNTCLRLTNIVLDCLQHKGRQVNVHLFCCGIKCYYFIMDKKQWKECEQACQGCKLSLLTIDDEDELKFLQLQVTPDSYWIGLSYDNKKHDSAWIDNNPSKL", "length": 224 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K3S0-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c109", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNQSFVNEFILLGLSQNPQIKKISFVIFLLVYIATLVGNMMIVVTIAYSPALLGSPMYFFLAVLSFLDACVSSVVTPKMIVDMVYERKSISFECCMTQVFAVHFLTAVEVIVLAAMAYDRYVAICKPLHYSSIMNRRLCGTLVGVAWAGGFLHSIIQIAFTLPLPFCGPNVIDHFICDLFPLLKLACTDTHIFIILVFANSGSICIIIFSFLLISYGVILFALRAHSSEGRRKALSTCGSHITVVVFFFVPCILIYARPTSAFSFEKNVFVFTDVLTPLLNPMVYTFRNKEMINAIRKMWKRLIVVSDKY", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K622-1", "protein_name": "Histone RNA hairpin-binding protein", "gene_name": "Slbpl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLSSRMEMVSVGVTTEPCHARWEVETDEVVLRRRQKQIDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIRQWRRALHTWDPPSQPLHDRQAEGKAAGNFLRPVDTAPLDDLLDNWPQDPESSENWDRGEKEAQFAYLKVPASCPPQLKDELLHH", "length": 169 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K698-1", "protein_name": "Lamin tail domain containing 1", "gene_name": "Lmntd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSHLASSHRVQKSSLARPERRAKSPSYTDISFWVPVMHRVGSQYQFESVCEQSSGYPGMPAQQVTPVPSQRGGILRKEEKTGTITPSKQHSSVHFFPKVMDSSSTLHLLSGSFSHEASANFHQIPSAQDSLSPGGLLTSKSNVPSCSRKDSIPGKQSTHQAASPGTSLMTLKKQPKPSSDLDTYVLGDGEDYFLSLFGDSKKLTSHTSQAEDVSKHLSVILEEVGQFVSSSLGDIKIAEVNVKGFFVRLVNSSNEKEVEIGNYILQQNVNGQAVSLYRFPHNITMQASGTVTVWAAASEAKPQQPTDFVWEEQSRFRSSPDCTTILCKPSGEAIAWYTPIHWKQAWEKLETDIEFERCSVVIPSLKSHIFGRTTSSVSSINKEKQEPTQKTPPQVCSVLLREKEILLTVLPNKSPWCRSPDTPPHPYSSLIEWHDSDFPGSSLGTQPKPQSTKPKPDPGTKEKKSTR", "length": 467 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6E6-1", "protein_name": "Rho GTPase-activating protein 20-like", "gene_name": "LOC120093152", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDEELVRANKTCTCKTIFFYWATGNALATFRSEEQKVQWYTFLTSRSISEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHKIEDYQLWFSPGHKEAPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERRRKSCMTSCFHGGCVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTKSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAVASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQAEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKMFYGRDLSKKLSIIQFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKANTKELEMSSAVPHEGGPTAGHNGTTSKYNVPQEIILHD", "length": 835 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K6V9-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKTVEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEEGPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKPGTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEERITTGTYTIPTHLSGQLENLIHQILRVSPDMRPSVEEIENHPWIKKCEFKILPKTDPDYKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITPAKPGDPCPPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPIAVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFKRLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2K894-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAHLLNVTEFIFLGLSPNKEGQRVCFVLFLLLYMAIVLGNLLMVVTVAASRNLGSPMYFFLSFLSFVEICYSSTTAPKLIFDLLAEKKSISVWGCMTQLFFMHFFGGTEIFLLTMMAYDRYVAICKPLHYTSIMNQQVCAVLVGSAWIGGFVHSFSQILLILPLSFCGPNVIDHYFCDLLPVLKLACSDTFLIGLLIVVNGGTLSVISFVVLLASYLVILFHLRTQSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRPSDTLPVDKMIAVFYTVITPLLNPLIYSLRNAEVKKAMKNLWFRIMKADEK", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KB39-1", "protein_name": "Myb/SANT DNA binding domain containing 5 like 1", "gene_name": "Msantd5l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQREANQGESLENTEESNVGKSVKEEEQRPSGRSRSSWTDSEIRVFLQEWEVVEQEMGQPGRKLHKKTKSLCQRLYQQGLKKSWKSCFHLLLSLQDLHRTLCNERPGIEPLFSPYSEALYRILGSTPHESWFPGPLYDEADDSMLPVYPQPPMYQPSDYGITVPSAQLQGNPVPMMCQEDSPFPTWEPWNPSYPLSVPHLLPGFAPGDPSLQQPWSMCDLHQDPQ", "length": 225 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KBC9-1", "protein_name": "Leukocyte immunoglobulin-like receptor subfamily B member 3-like", "gene_name": "Lilrb3l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTFTFTALLCLGLTLRLWIPVLTGSLPKPILRVQPDSVVSMGTKVTFVCEETIGVKESHLYRNGNLQRTVLKNHQKPTNKTEFSFSNVDQQMQQYQCSYRTQTKSSDYSEPLELVVTGAYSKPSLSAQTNPVVTSGGYVTLKCEPSQDNHTLILTVEGSQKHSWRKDPECNRYTEKCHALFYVGPLTSNQRWIFRCYSYEKHTPQVWSAPSEPVELLVSGKLQKTTIKAEPGSVIRSGRAMTIWCQGDLDAEIYFLHKEGSHNTQSTQTLQQPGNKAKFLIPSVTQRHAGQYRCYCYSSAGWSEPSDTLELVVTGIYYYGVKLSGLPSPVVPEGGNVTLHCTSHSNYDKFILTKEDQKFTSSLDAEYIPSTGQHQALFVMGPMTPNYSGTFRCYGYYKHTPQLWSVPSELLKIFISGPSRKPSLLSHQGHILEPGMSLTLQCYSDTKYDKFALYKEGGTDIIESFSQWTKAGLSMTNFTLSVMPNSTVHSGENVTLMCWSTYSVDTFILSKEGSGQPPLRLKSKIQDQQYQSEFSMSGVTSKLSGTYRCYGSHDSSLYLKALIGVSVAFLLFLFILIFILLRRRHQEKFRKDDEDAQKGKELQLSTGAAEPVTRDRGHQKRSNPAAATQEESLYASVEDMETKDGVELDTWKPPEGDPQGETYAQVEPSRLRRAGAISPVVSREQLNTKYEQAEEGQEVDSQATESEEPQDVTYAQLCSRTLRQGTAAPPLSQAGEAPEEPSVYAALATARPGAVPKNKKQ", "length": 761 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A0G2KIH5-1", "protein_name": "Major histocompatibility complex class I LLA precursor", "gene_name": "mhc1lla", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTGKVLFVLFLLSAPTTVLTDSHSLWLLGTYIKGETQFPKLSFTVMLDDLRVGFYNSETKEFIPRDNTTNEDEAVSDVLTVIQNTLEPFMMSTLTFKNGTESPQLFQITWHCELLDNDKPGQIIFKIAFSGSTTDEVSFYNDNFTCQCQNNMATVPLESFQMHYETVCYPNCIATIRDYLKKRQTQVNGKVQPKVRLIKKVHPKSGGFRLSCLATEFYPHSINLTLLRDGQPVSDHEVTGGNLLPNGDGTYQMRKSLEIRADEREKHKYTCSVSHLSLDKILDIDFEFDPSFLIKIVIPVVVLLSLMLVLTAVLIHKCKNKRAESKETITTASTPEPTEMSETLRK", "length": 346 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IEQ0-1", "protein_name": "Guanine nucleotide-binding protein subunit alpha", "gene_name": "gna11a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTLESMMACCMSEEAKESKRINAEIDKQLRRDKRDARRELKLLLLGESGKSTFIKQMRIIHGTGYTDEDKRGYTKLVYQNIFTSMQAMIRATEHLKIPFRFEDNKKNALLVREVDVEKVCSFEQPYVAAINKLWMDPGIQEAYDRRREYQLSDSTKYYLNDLERISSRGYMPTQQDVLRVRVPTTGIIEYPFDLENIIFSYLSDLERISDPSYLPTQQDVLRVRIPTTGIIEYPFDLQSIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKILCSHLVDYFPEFDGPQNDAQSAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQHNLKEYNLV", "length": 400 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4ILG2-1", "protein_name": "FXYD domain-containing ion transport regulator", "gene_name": "fxyd2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGVESPEHSDADFTYDYELIRRGGLIFAAVLFCLGMVIIFSKKLRCGKSSATHEDNGDL", "length": 59 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IU63-1", "protein_name": "Metabotropic glutamate receptor 5", "gene_name": "grm1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMLILRMNFFIVFLLFCTRLHLSTERSAVSRAASRSVARMDGDIIIGALFSVHHQPSAEKVAERKCGEIREQYGIQRVEAMFYTLDRINSDPYLLPNITLGCEIRDSCWHSSVALEQSIEFIRDSLISIRDEREGPKWCVEGNPSAQPPATKKPIAGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGESGMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRGLLMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEEEAVGGITVKLQTEEVTSFNDYFLKLRLATNNRNPWFAEFWQHRFQCRLAGHPQENTNYRKNCSGYESLEDNYVQDSKMGFVINAIYAMAHGLHDMHEHLCPGHVGLCEEMDPIDGSKLLDFLLKTSFAGVSGEDVWFDENGDSPGRYDIMNLQYVEPGVFDYINVGSWHEGILSIDDYMIQMNRSEMVRSVCSEPCSKGEIKVIRKGEVSCCWICTPCKDNEYVQDEFTCKACELGWWPDEELQVCEPLPLRYLEWSHPESIAAVVFSCLGILVTSFVTLVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIARPSIASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVVIAFILISMQLTLEVTLIILEPPEPIKSYPSIREVFLICNTSNMGMVAPLGYNGLLILSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMFKRKKNASGNANSNGKSVSWSEPGSRHPPKGEHMWHRLSVHVKKQEAGSNQTAIIKPLTNTYNNPGMEFSDLSTKTLYNVAEEDEIDPIRYNPSNSPHLMAPVSKPMKEVGANLTFYTPEQHVPQQNSVLPQHAMIEHFQDDVVKYNSNMADLDEIISLPEPTDGIILALQPQVLHPHPILPMNVYQDEPSSPLEEVENEQFGLLHGYMYDNAQIHDEEELVQIKMAMEDSMALMPPSPFRDSLGSGSPVRNSPVSESVLCTPPSVTYASVILRDYKQSSSTL", "length": 1158 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4IUN8-1", "protein_name": "Trypsin inhibitor ClTI-1-like precursor", "gene_name": "spink2.9", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLAQIVLLLCLSVMATAADKCPSVPNCSRYHPHACTMEYWPVCGSDGNTYGNECELCATIFEEKLNIILISKKGEC", "length": 76 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A0R4J2B9-1", "protein_name": "BTB domain containing 35, family member 23", "gene_name": "Btbd35f23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPVSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFTNILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQKCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICNLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNQEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A140T8Q5-1", "protein_name": "BTB domain containing 35, family member 21", "gene_name": "Btbd35f21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMILYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GQX3-1", "protein_name": "Cortexin domain containing 2", "gene_name": "Ctxnd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCVLMEDSSMSNGIDVDKGFAIAFVVLVFVFLIVMVFRCVKLVKNPYEVSSTTADLPLN", "length": 59 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GRH6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 3", "gene_name": "Zscan4-ps3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVRQFPHGARRASQGTPSHHVDIQSPPTTADVTMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGFPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCKSHQKRFCRDAKLYKCEECSRMFKHARSLSSHQKTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GS00-1", "protein_name": "Predicted gene, 36210", "gene_name": "Gm36210", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHPGSPAAPGVSEPGPRELCAFVSGASAHMLRALQPRRIRPSKRRPNHRRFLHNQICREFAKIEAATQHLALTILSQKAPAQRPPFRRPPPPPPSPFLGVACAEAPMEAPHGSPSLSPVALDTSTLDLFDDILLTPTPRPLVTPDSFCQTLPAGNPQVASDVISHALGPGDQGQPTPIQAPRFSNLLLPPQKAQGGSLEPAALGCGWVDSWEAPYACDPQGVLDSWGAL", "length": 229 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSB3-1", "protein_name": "Family with sequence similarity 236, member D", "gene_name": "Fam236d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATEGVATAHTMLTSRGPRDTREPAPPTRSWRSRFQRALARVSKFFRRGRRTARG", "length": 72 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1B0GSI2-1", "protein_name": "Family with sequence similarity 236, member C", "gene_name": "Fam236c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVMHLVGHPQLTGTEGVATAHTKENSSRGPRETREPAPCTRSWRSRFQRAVARVSKFFRRRRRST", "length": 66 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYU6-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 2", "gene_name": "Zscan4-ps2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQYATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEGNVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSVPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1C7CYV3-1", "protein_name": "Zinc finger and SCAN domain containing 4, pseudogene 1", "gene_name": "Zscan4-ps1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWAIQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYTLTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNTSCNATEGNVGERCGGNEMDSLLIIQKEQHPEHEEGNVVCRFPHGARRASQGNSSHHVDFRSALTPADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSSDNIPRKKTDSLSINKRIYHPEPEVGDIPYGVPHDSTRASQGTSTCLQESLGECFSEKDPREVPGLESRQEEPISDPVLLGKNHEANLPCESHHKRFRRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCFTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1D5P3Y4-1", "protein_name": "Large ribosomal subunit protein uL24m", "gene_name": "MRPL24", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MRLSALLRLAAPPKLPKGYRHGTWRPGTAAERLRNPPGQRRKKIFVEPISREDWKVFRGDTVQVLTGKDAGKQGMVTQVVRARNWVVVEGLNTHYRYVNRDAKYSSTYIASEAPLLLNQISLVDPEDRKPTEVDWRYTEEGERVRVSLRTGRIIPLPLWQRRDGIVPEQWIDGPKDTSVDDALDKTYTPSLKTFEEEIMDAMGIVETRRAKKSYWY", "length": 216 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5PNZ8-1", "protein_name": "ODF3A protein", "gene_name": "LOC124417034", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPATKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A1D5RLF0-1", "protein_name": "F-box and WD-40 domain protein 27", "gene_name": "Fbxw27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METHLPSLPLMKIFSYLDAYSLLQVAQVNKNWNALASSDVLWRKLCQKRWLFCDMVTLQLQDKETWKQFFVYRTWQEHSKTRANPRDFTYKEIPLQYGPCGYACYISGCGITRKGQDKSVVCMVNSKNTISTWDVHKSVITWVSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNILESPCKSLKAVITKDDPIVLVSDILGNLYIFRIPDLHLISTVNVLPCDIDEIYCSPQKKWVLLSKKQPYILPKVFYMSSLLRTSEFSAPVSTLLEISLCQEAFWTPRREDRLTLMSRSGCSKITKFETYDMKLEEFGNKIIVKGNSIAGFLLPYYTESLNWFGVSDKDTIVCSTEFSLLLFTNNGHRLQTFQYFSETIVRLSVDPVHVIVTCNDGSLDVYAWEERSLLLRKCYRLKNRRHLSPRGFINKTLCDDVSIIQLMIDGHDTWFLMAYALNICS", "length": 466 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1P8ASP4-1", "protein_name": "Serine/threonine-protein kinase PRP4 homolog", "gene_name": "PRP4KB", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVSDKHVESNHRKHRRSFSPSDEVFKSPKRHKSRHHHRRHGHRHHRDEEVQYNDDENVNGGDLDMEEGEILGKEGIGETLKKKLESVDEFGDIKSGQFRENNLAFNGDDGFPLICKSWIRVYNYLSYKCHGRNQRRERECEKRKEIEPDRERRKERGSVDRDSRGDREKDYLRDRDNDRGRSRDKARYSSRERGRENERERRSEKDRDKGREFQSDREKHKSLDDGYGEVRHKHSGHSRHDAEDDLELRSPTSVNGHDPNSGDVKETRGNVERTRIDNDDKGDVVVWEVEQEDEELNLIEESRRRTQAIMEKYKKKLEQQNGFSSHDLELANIPKQSSTVADVLGSGTLGPVTSAVNQAKAGLDIDAVDGEVAKLSSAVGESPAQLVISDSDRTLASTGLGEGSPKDKISDDMFTDDIFGESPADSQKMVCTLTQIIDLVFIEFSNSGFICFVFPVHHLTRYSRNGLPFVHYIFVGYLRGKGNGIPIVRSGLDDNWDDAEGYYSYQLGELLDDRYEIMATHGKGVFSTVVRAKDTKAELGEPEEVAIKIIRNNETMHKAGQTEIQILKKLAGSDPENKRHCVRFLSTFKYRNHLCLVFESLHLNLREIVKKYGRNIGIQLSGVRVYATQLFISLKHLKNCGVLHCDIKPDNMLVNEGRNTLKLCDFGSAMFAGTNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELFSGKIMFPGSTNNEMLRLHMELKGAFPKKMLRKGAFIDQHFDKDLCFYATEEDSVTRKTTKRMMVNIKPKEFGSVIKQRYKDEDSKLLVHFRDLLDRIFILDPQKRITVSQALAHPFITGK", "length": 834 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1P8BFV1-1", "protein_name": "Bax inhibitor-1 family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGLKDFSRISPAIQSHLMRVYFSLFCILAASAFGAYLHMRLNIGGTITKLGWVLSLLEHVVSCPPYKHKIRFSLLLLFGVLHGASVGPCIKSTIDIDSSILITAFLGTAVIFFCFSAVAMLARRREYIYLGGLLSSGFSLLTWLKNSDQFASATVEIQMYLGLLLFVGCIVVNTQEIIEKAHCGDMDYAVHSLILYIGFVRVFLQILSIMWNTSADRIRRNNEET", "length": 226 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A1W2P6Q8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7S8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKMRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLIGGLNTPLHESDFSGVTPQQQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLHINPEDGMADHSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQATRDAERVKEMKRMHKAVQKDLPRPSEVNETILRPFDVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGFATNDSEHITYLEHSPYEKFSKEDLKKAQDALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPAQSCYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLEEDVQRQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P7Z8-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2P855-1", "protein_name": "Cell division cycle 5-like protein", "gene_name": "Cdc5lrt8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRIMIKGGVWRNTEDEILKAAIMKYRKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDRTAQRDNEEETTDDPRKLKPGEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEIQKKRKRKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQDLDGELRSEKEGRDRKTDKQRLKRKKESDLPSAILQTSGVSELTKKRSKLVLPAPQISDAELQEVVKVGQASEVARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPAPQDRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPLRTPSNGAEGLTPRSGTTPKPVTNATPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGFLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRDAERVKEVKRMHKAVQKDLPRPSEVNETILRPFNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKNVGLATNDSEHITYLEHSPYEKFSKEDLKKAQGALVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLSLIAQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQSRAMGLMKQLNDLWDQIEQAHLELRTFEELKKREDSAIPRRLECLKEDVQLQQEREKELQQRYADLLMEKETLQAKF", "length": 802 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1W2PP81-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 5", "gene_name": "TAF11L5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A1Y7VLT7-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A1Y7VNG9-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRHRGKNENESEKRELVFKEYGQEYAQVTKMLGCLWLEAMCFDGVKRLCHIRGKLRKKVWISTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINETDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YCH8-1", "protein_name": "Predicted gene, 47985", "gene_name": "Gm47985", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGAPHNSAKRHRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPIVLQRAWLTWQLSHAGAALHWALHTVKSILTSQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YD13-1", "protein_name": "Predicted gene 8947", "gene_name": "Gm8947", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKREQLLDKKAEDKQPPESRCNNGRSSKSSPMGKENTWPSREAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDQRSQPRSPVRTLKRSRSGDRQGAPHNYAKRRRQTFPPEASCSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYIWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 301 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286YE43-1", "protein_name": "Predicted gene, 47996", "gene_name": "Gm47996", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALGAELSETLVEKPEHMNLEMSILAPSKRKQLLDKKAEDKQPPESRGNNGRSSKSSPMGKDNTWPSPEAKVPSQKRSGQSWAVSSCGPHKRSSKLEDKRRNRPSRFRERGRDKPGSTHKRDSSHTKLHVKDRRSQPRSPVRTLKRSRSGDRQGVPHNSAKRCRQTSPPEASSLPTFSLLMSRVFTNVDALQVSLDDLQAPGGAFLRVPSSSTEPSVSQRAWLTWQLSHAGAALHWALHTVNSILTAQASLPRYTWPQGYSFTADPRPVPTSKIQASQLAQRPGDLASPNPSVDTRSILG", "length": 300 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A286ZIN6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258935", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANLTSMSGFLLMGFSDDHKLQILHALLFLVIYLLALTGHLLIITITTLDHHLHSPMYYFLKHLSLLDLCFISVTVPQSIANSLMNNGYISLGQCILQVFFFIALASSEVAILTVMSYDRYVATCQPLQYETIMDPWACRQAVIAVWVTGGLSGLTHTAINLSVPLCGDRVIHQFFCDVPQMLKLACSYEFINEIAVAAFTTSTAFFCLISILLSYTRIFSAVLRIPSAQGRTKVFSTCLPHLLVVTFFLSAAGFEFLRPPSDSQSAMDFMFSIFYTVVPLTLNPVIYSLRNKAMKAALRKVLSKEEFAQRKKYFKALFQL", "length": 321 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZIP8-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259124", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "QEYKANGGDNTTTIIHFVLLGFSDFPHIRPALFVVFLVIYILTLTWNLCLIVLIRLDSHLHTPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECCLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVQVLTAIFTVFFGIINALVIMMSYVYIVISVMKITSAKGRSKAFNTCASHLTAVTLFYTSGIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 316 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZLI4-1", "protein_name": "C-C motif chemokine ligand 24", "gene_name": "CCL24", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFSPSSLIKASGQLQCPAGNRLLAPTLSSCIAALSPELPLLLSRHGRPVTVAASLLFLGLCAYSFAPADSVTMPSSCCIYFISKKIPESRVASYQLSNSSVCPQAGVIFTTRKGQKFCGDPKQLWVQKYMKKLDAKRKKASTRIRAMGTGAPVRRGPANSTSI", "length": 163 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZSE3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258059", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPKLQVLIFIFLFVAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEISFISSCIPRYLYSIATGDKVITYNACVIQVCFTDLCGVTEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSVQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZU87-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100152920", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILETMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDHYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSTVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSWRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZVC9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258401", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZWC4-1", "protein_name": "Zinc finger protein 16", "gene_name": "ZNF16", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLPLSQVPAMPSLRTRPGKAEMEPSVPGPSLRTPGTQVSVSDAPAVTHPGSALHGPLSCGDTEPGATPPHHQLADWDLRTEGSQLLQKEDASEDLESQAGTSEDYVGAGSQAPERGELCADVLGSDWGVPQGERLSLCQEGGFMPAYLLPGSPLEEPEIDTEPLERNFGLIITPVASPGEPEEETPQPFDACDQSVHCGVDLAGHEGLHAAESSFICGECGESVGLHSDLLRHRLSHRGEKPHVCAECGEAFSQSASLESHQRSHEPAKPFQCSTCGKAFGRSSSLIKHHKVHTRERPHACGECGRPFSRFSNLVKHRRVHTGEKPYRCSECGKAFSQSSSLLQHRRVHTGEKPHVCPVCGKAFSYSSVLRKHQIIHTGVKPYSCSACGKAFSHSSALIQHQGVHSGDKPYECRECGKTFGRSSNLILHQRVHTGEKPYECAECGKTFSQSSTLIQHQRIHNGLKPHECDQCGKAFNRSSNLIHHQKVHTGEKPYTCVECGKGFSQSSHLIQHQIIHTGERPYKCGECGKAFSQRSVLTQHQRVHTGEKPYDCEACGKAFSQRSKLVKHQLIHARE", "length": 576 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZX75-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100156955", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "IFIMEWENQTASSDFILMGIFSHTPTHIFLFSLVLGIFTVALLANTVMVLLICLDRRLHTPMYFLLSQLSLMDLMLICTTVPKMARNYLSGRKSISVAGCETQIFFSVSLFGAECFLLAVMAYDRYAAICYPLQYPQLMNWNVCGLLAASSWILGVFDGIVDIAATLSFSYCGSREIPQFFCDITALLRLSCTDTSTFETLVFICCVVMLLFPLSLIIISYTRVIITVIRMSSGEGRHKAFTTCSSHLVVVGMYYGAAMFIYMRPTSNRSPAQDKMVSAFYTILTPMLNPLIYSLRNKDVAKAFSRCWGREI", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZY56-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258501", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "METDNDTQILEFLLLGFSKQPESQPIIFGLFCSMYLITVFGNLLIILAVISDYHLHIPMYFFLSKLSFVDICFTSTTIPKMLWNIQTQSKAITYEGCITQIYFLILFAVLDILLLTVMAYDRFVAICHPLHYTVIMNPRLCGLLVLVPWIMSVLNSLLQTLMMMQLSFCTNFEIPHFFCELNQMIQLACSDTFLNTIVMYFAAALLCGGPFFGILCSYSKIVSSIYRISSAQGKYKAFSTCASHLSVVSLFYCTMLGVYLSSAAAHSSHSSATASVMYTVITPMLNPFIYSLRNKDMKRALKALFVKGPM", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A286ZZP6-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MANAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHLPNYH", "length": 402 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7E2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258743", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNSTSLHDFILLGFSDHPKLEMALSGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFPDLCFTTSIVPQMLVNLWGPHKTISYGGCVIQLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKVACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSRAGQRKAINTCGSHLTVVSIFYGAIIYMYLQPGNNASRGQVIFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A7J9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258750", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVKEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLAFVDLCYATAITPKVLQNLMSTEKSISFIGCMVQLFVYGTFVTSDGYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSCFMGFLNACVNGSLTFQLNFCKSNKINHFFCDAPPILALSCSSIYFNIMLLAAFVGFNLMFTVSIIIFSYIFILAAILKISSAAGRKKAFSTCGSHLTAVTIFHGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMLNPLIYSLRNQDVREALKEIGKKML", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287A951-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "LOC100514137", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVHMNVLTDALESINNSEKRGKRQVLTRLCFKVIVRFLTVMMKHGTPIGKFEIMDDPRARKIVVNLTGRLNKCGVISPRFDGQLKDLEKWQNKLLPSCQFGFIVLTTSAGIMHHEEAR", "length": 118 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ACV2-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDAPTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLIKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEDSAWNKLQFYHNPNFKRGCPNLLVRMKRRVRVKNASPVSASLLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSTSTNLNVPLIRWPSMSQRISNTTTPTRSGLSSPSSPSVRPPGQIVMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYHRISNFPSGYFGLRVEPSPLPTRYQNISPTEGPVSNPQPAAHPWFPMPMATDTSVASLSRPNPQSSSISEHHPNYY", "length": 402 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AEV7-1", "protein_name": "Uncharacterized protein", "gene_name": "WFDC10AL", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKWWGLQWLMLSCLAILPASGNWQERISASLEALTQSKLIPGMKPCKTIPTKEQCTYFCDLPRACPTGLLCCSASCGNVCMPPKGHGNRRSSHKISNFLFTAEPIKQQ", "length": 108 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AF12-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTNTKGKRRGTRSMSSSPFRKHGVVPLATYMRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRVYNVTQHAVGTVVNKQVKGTILAKRINVHIVHIKHSKRGDNFLKRVKENDQKKKEAKEKVTWVQLKHQTAPAREAHFVRTNGKEPELLEPNP", "length": 155 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AGK9-1", "protein_name": "DM domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDPDEMPTVPCCPLDSTTGLETGAPWGIEFGPRRAIRRCARCHNHGITDQIKDQEHLCLFQACECHKCVLFSEHCSILPAESALKTMQELHLKRQLTQGLIKSGTTSPKAHSHVKKSSIQTGVLSKLPRCSADRSGIGIFVSVLDSSTLEEATNNFTFQEVTQAPCPAQQAPKTSDQDSDSASLEWQRKLEAAEALLTLRESSQAPSGPTPLLQPSAAPAPAGERGLQPPSRSLRPRPASSISLPIGHVGCISLLS", "length": 256 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AKK8-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100155397", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDVRNHSIVSEFVFLGFTNSWEIQLLLFVFSFLFYSSSMMGNLVIVFTVTLDSHLHSPMYFLLANLPAIDMVFCSITAPKMIGNIFKKHKAISFCGCITQIFFTHAAGGTEMVLLIAMAFDRYVAKCRPHHYLTIINPRICLCFLVTSWIIGLIHSMAQLFFVVDLPFCDLNVLDSFYCDLPRLLRLACTDTQELQFMVTVNSGLLSMGSFVLLIISYIFILFTIWKHASGGSSKALSTLSAHITMVVLYFGPLIFFYTWPSPTSHLDKYLAIFDAFITPFLNPVIYTLRNKEMKVAMRRLFSHLVHYRNIS", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AP00-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258730", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "SRHDLHCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLTGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCDHLAMVSWGVGCMAALGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSMPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTVVTSMLNPIIYSLRNKDVKAALRRTLGKKKVLAHR", "length": 322 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287ARD5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258934", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLTFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLFYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AT12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLSFNRTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQFFIIHCIFMSESGILLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIFLRSYCTVFPIIFLLKRLTFCRNNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDILLIFVSYMLILRAVFHMPSQDARHKALSTCGSHVCIIILFYGPGILTTLAQRFGRHIPAHIHILLANVCVLAPPMLNPIIYGIKTKQIQEQVAHLFLKQK", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AUC4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MERINKSHPEEFILLGFADRPWLELPLFIILPMYFFLTNLSFLDMCYTTSIVPQMLFHLGGSEKTISYLGCAVQLYFFHTMGGTECLLLALMSFDHYVAICKPLHYTLIMNRCTCILLVATVWLSGMTYAVSEATVTLHLPLCGHNTLDHLICEIPVLIKAPCGEKGTNELTLSVVCIFMLAVPLCFILASYASIGHAVFKIKSSEGRKKAFGTCSSHLIVVFFFYGPDISMYLQPPSSISRDLPKFMALFHGVVTPTLNPFIYTLRNKDVKGAWGNLVRSVFTSK", "length": 286 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AXC2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTEVNEFILLGFAGQHKSWLVLFIVFLGIYVVTLVGNIGMILLIKIEMLQNFVGTEQSISFIGCMVQLLIYGAFVTSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLLIGSYLIGFLNASVHVSFILPLNFCKSNKINHFFCDAPPILALSCSSIYFNVMLLAAFVGFNLTCTVLVVIFSYIFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 281 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287AY25-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100155405", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLSNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSRRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDRFFCNLPLVIELACMDTYKVEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRLSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNHHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B1Z6-1", "protein_name": "Short stature homeobox", "gene_name": "SHOX", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL", "length": 292 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287B9C9-1", "protein_name": "HSF-type DNA-binding domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHAPSEIQGVSPKDESTGSESSITSPWCDNSITGDLDLRSQIEEKAFQALSEGSLMKEPCHTLCASEPDGDNDFPPLPFPRKLWEIVESDRFKSIWWDENGTSIVINEERFKKEVLERKAPFRIFETESMKSLVRQLNLYGFTKLRRNFQRPASLANILAEDNEVSAWNKLQFYHNPNFKRGCPHLLVRMKRRVRVKNASPVSASVLQGCSKKRSRTGGDVDNHNSDVAAETRGEDAFSASTNLNVPLIRWRSMSQRISNTTTPTRSGLSSPSSPSFRPPGQIAMAQHAIFSQLTTFHMHSQSSYSPASGHIVNFITTTTSISQYRCISYFPSGYFGLRVEPSPLPTRYQNISPTECPVSNPQPAAHPWFPMPMATDTSAASLSRPNPQSSSVSEHHPNYH", "length": 402 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BB76-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100157512", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAHTNESVVLEFVLLGLTNSWELQLFLFAIFSIVYVTSVLGNTMIIVIIASDSRLNSPMYFLLGNLSFIDICQSNFATPKMLVDFLVEHKTISFEGCMAQIFLLHSFVGSEMMLLVAMAYDRFIAICKPLHYSTIMSHRLCIIFVFISWAVGILHSVSHLAFTVDLPFCGPNEVDSFFCDLPLVIELACMDTYKIEILTLTNSGLISLGCFLALIISYTVILITVHRWSSSGSSKALSTLTAHITVVILFFGPCIYFYIWPFSRHSVDKFLSVFYTVCTPLLNPIIYSLRNEDVQSAMHKWRNRHVNSWKY", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BC21-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152520", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDGKNQTALSEFIILGFSNLNQLQFLLFTIFFLTYICTLGGNTFIILVTVVDPRLHTPMYHFLGNLAFLDICYTTTNVPQMMAHLLSEKKSISYGGCMAQLFAFIFFVGSECLLLAAMAYDRYVAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSAIFTYVRPISSYSLEKDRLISVLYSVVTPMLNPIIYTLRNKDIKEAMKAVGRKWQLPLLSFDV", "length": 317 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BF45-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100513333", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNRTITTFILLGLTDDPELQVLIFIFLFLAYMLSLTGNLTIITLTFVDSHLKTPMYFFLKNFSFLEVSFISSCIPRYLYSIATGDKIITYNACFIQVCFTDLCGITEFFLLAAMSYDRYVAICKPLHYVTIMSSRVCGILISSCWMAGLCVLIPPLSLGLNLKFCDSNRLDHFGCDAFPLVKISCSDTWPMEQTVIICAVLTLNMTLTCVVLSYAYIIKTIFRFPSDQQRKKAFSTCSSHMIVVSITYGTCIFIYMNPTAKGEVTIKKVVSLLIFSVSPTLNPFIYTLRNNQVKRAFKDSIKRIALLSTR", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BGE2-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENNQSWIAEFILVGFQLSEEMELFFFIIFFLLYIFNLLANGMILGLICLDPRLHSPMYYFLTHLAVTDISYASSNLPNMLENLVKHKKTIPFVSCTLQMLFYLAFASVECLILVVMSYDRYVAICHPLQYTVIMNWKLCTVLAIISWACGFFLALVQVSLFLRLPFCGPQKVNHFFCEIRSVLKVTCGETWINKIFLFADGVFILVTPISLMLVSYVRILWAILKIQSKEGRKKAFSTCSSHLCVVGFYFGIAMMVYLVPDDSHQQEEQQKILFLFYTFFNPLLNPLVYSLRNAQVKAAFHRIFQKNRTM", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BIM6-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGKRSRRKSPGRQGRTCARTTRAGLSASVSHMERLLREGPYAQCLSSSARVFLAATIEYLTARVLELAGDEAQIVGRRCITPELVAMAVHNNALLSAFFGTLAISQVAPTQE", "length": 113 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BK27-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVTEFIFLGLSNSQELQTFLFVFFLVFYVGIVFGNLLIVLTVMIADFFRKCKVISFKGCLAQIFLLHFFGGSELVILIAMAFDRYVAICKPLRYTTIMSSNVCVGIVAAAWGTGFLHSVSQLAFAVNLTFCGPNEVDSFYCDLPRVIKLSCTDTYRLDIMVIANSGVLTVCSFVLLIISYTVILVTIQHLPSQKSSKALSTLTAHITVVLLFFGPCIFIYAWPFPIKSLDKFLAVFYSVVTPLLNPIIYTLRNKDMKTAMKRLRKWNMNSRIKP", "length": 274 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKA6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259008", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTFNCSLWQDNSMSVKRFAFARFSEVTEQCFLLFTLILLMFLASLMGNALIATAIWTNPVLHTPMYFFLANLSLLEIGYTCSVIPKMLQSLVSEARGISREGCATQMFFFAFFGISECCLLAAMAFDRYMAICSPLHYATRMSRGVCVHLAMVSWGVGCMVGLGQTNYIFSLDFCGPCEIDHFFCDLPPILALACGDTSHNEAAVFVAATLCISSPFLLIIASYGRILAAVLSIPSPEGRRKALSTCSSHLLVVTLFYGSASVTYLRPKASHSPGIDKLLALSYTMVTSMLNPIIYSLRNKEVKVALRRTVGKKKVLAHR", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BKW4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258932", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEGENQTVLFEFIILGFSNLKELQFLLFTIFLVTYICTLGGNSFIILVTMTNLHLHTPMYFFLENLAFLDICYTTTNVPQMMAHLLSEKKSISYLGCMAQLFAFIFFVGSESLLLAAMAYDRYIAICKPLRYSVIMNKVLYSQLAASCWSGGFLNSAVHTVLAFRLPFCGNNQINYFFCDIPPLLVLSCGDTSVNELALLSIGVVIGWTPFLCIVLSYLYIISTILRIRSSKGRQKAFSTCASHLTIVLLYYGSTIFTYGRPISTYSLEKDRLISVLYSIVTPMLNPIIYSLRNKDIQEAMQVMGRKWKASSSLSFDV", "length": 318 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BLZ6-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC110258167", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGGKNSTTITKFILLGFSEFPKLTAVLFSVFLRISLMTVSWNMGLIMLIRMDSHLHTPMYFFLSNLSLLDICYVSTIAPRMLSDFFKKYKFISFMGCTMQYFFSSLALTECCLLAAMAYDHYAAICNPLLYTAIMSPTLCVQMVAGSCVTGFFGSFIQLCALFQLHFCGQNVTNHFFCDLPQLLILSCSDTFFFQVMTSVLTVIFGLTSVLVIIISYGYIIATILKITSSEGRSKAFNTRASHLTAVTLFFGSGIFIYMYPNSGDSLSQNKLVSVLYTVIISMLDPLIYSLRNKEIQDSLSRWRKTIFSWCY", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BNL4-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "TVLNARNVSTPKVFILLGFSDHPWLEMPLFIIVLAAYIRTLVGNISIIVVSRVDPNLDSPMYFFLSNLSFLDLCFTTTTIPQLLLNLWGPDKSISYGGCVTQFYMFHFWGATECIFLAVMSMDLQAICKPLRYPVIMHQQLCIFLVVMAWLSGLVNSLLQSSLTIQLPLCGNNKVDDFLCEVPVMIKMSCTDTTFNVAMLSIVGTFYSLVPLSLILVSYGFIVATVLRIQSSEGKKKAFNTCSSHTIAVSLFYGPVISMYVQPSAANSQDKNKLMSLFYSLVTPMLNPFIYTLRNKDMKGAMMRLLVSLYHQRRG", "length": 315 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A287BSD4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100525471", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENENSTVVAEFIFVGLTQSRNIQLLVFVLILIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNLRACYALLVALWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLMTLLCFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPAIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKRLLNQQLA", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A2R8VHJ9-1", "protein_name": "Predicted gene, 36245", "gene_name": "Gm36245", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSTKNEEQNEDQSEGVVIPHIQDHHCLAILAFCFFFPLGYLAYRSSCKTRTYIEQKEYEKAKATSRCTFAFVLSSIAGGSIIFFCLFSRLFFM", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A3L7ICH5-1", "protein_name": "Cytochrome c oxidase subunit 7A2-like, mitochondrial", "gene_name": "LOC100756118", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYYKFSGFTHKLAGAWALESYSPQGLKPVASTEAPPIVFATPTKLTSSVTAYVYAGKNKVPELQKFFQNFFHLKRGLPDQMLYRTPMALTVGGTIYCLSALYMASQTPNK", "length": 110 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A3Q1LL21-1", "protein_name": "BTB domain-containing protein", "gene_name": "LOC112445444", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGPLNSRNLQCRESGTGELQQPEAQAGPSYVSGSRKRKQSTGPSLGPESEMSHNQEEDLQQVVCTRQGKKVKIKSEYAYQTLFLNGETSDIKIRALGKVWCLHKRFLCQSDYFATMFRDSGKECHKDIIDLEINDQNINVESLQFVLGSLYRNEYVLIKPLQVPRVLATACLLQVEDLIQQCDKTMKETINVKTVCSFYVAAETYGLHSVKTGCFEWLLHNLMTHPSVELYKKLSTDLMNLVISSSNLFVMQKEIDIYTTLKQWMFLRLNPGWKGTMKQLLVNANNWFSRHKEHDGSISFLETKQGIVFQPVFKNLRFQHIICDLASTKVIEQDALIPSEWLSCVYKRQWYTLLRAQQYREIGPRDITETELEEYSMRCGKRIVRDGTYAWKWSGYNFGVHLYVVFTSHFIIFKRHAFSQPYDGSICLQPQRNIAFRLTLVYFGSSGKLSFRKTTGYKILTFEKDEEQMVMKLDSVALSFPLYIFCNFLFISLENPGN", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LLV6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIIIGTLITGYMVTCTCFLHYSCDSEEAHKATKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1LUU6-1", "protein_name": "Guanylyl cyclase domain containing 1", "gene_name": "GUCD1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGPRCRRKQRPSGRPGPRGTRAPQHPTPDAGWTARRAAGAAGAEARGRDLPPQRKPAKPTAPGKGRPERGECPRRADRGGGDPEERAGGRPAWGPGAGRGGAWGRSRLPPLLPPGRWCWRPGKPARAGRALSSPVDARAAAGAGPGPWEPRAARVMRTEVDAEAAGPPLEPDEPTQSLSIQDQETAFLLEDSCQLKPGQPLPGRPWPSGDFVQLPVPIIQQLYHWDCGLACSRMVLRYLGQLDDAEFEQALQELRLTRSIWTIDLAYLMRRFGVRHRFCTQTLGVDKGYRSQSFYRKHFDTEETRVNQLFAQAKTCKVLVEKCRVSVQDIQAHLAQGHVAIVLVNSGVLRCDLCSSPPKYCCFTPSGPRCFCRSPDYQGHFIVLRGYSRAAGCVFYNNPAYADRMCSASISNFEEARTSYGTDEDILFVYADS", "length": 434 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1M0W3-1", "protein_name": "IF rod domain-containing protein", "gene_name": "LOC787600", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTCGSACFSSRSGVRSSSSCVTTQRYAPGRTFSCVSACGPRPSRCCITAAPYRGVSCYRGLTGGFSSRSVCGGSRAGSSSRSFGYRSGGPSPPCITSVSVNQSLLKPLNLEIDPNAQRIKHQEKEQIKSLNSKFAAFIDKVCFLEQQNKLLETKWKFYQNQRCCESNLEPLFNGYIETLRREAERVEADTGRLASELNSLQEVLQGYKKKYEEEVALKTTAENEFVKIKQEVNRAYVLKGDLEANAHSLVEEVGFLKTLYEEELRVMQAHISDTSVVVKMDNSRYLNMDSIVAEIKAHYDEIASRSRAEAESWYRSKYEEIKATVIRHGETLRRTKEEINELNRLIQRLTAEIENAKSQNSKLEAAVTQAEQQGEAALNDARGKLAGLEKTLQKAKQDMACLLKEYQEVMSAKLGLDIEIATYRRLLEGEEQRLCEGISAVNVRVSSSRGGVVCGDLSATRTCGIGSYGVGACGSSCKKC", "length": 480 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MFB0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112441459", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELWRRLLIIVIGTLITGYMVTCTCLLHYSCDSEEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKSTWPPSLQCRVKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVTLFSRELKHFYKSYKKKQPIYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDMFKNSQNN", "length": 361 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MI36-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGSSSGSKAEFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQGEVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILFRTLNHQYDYTSDWTMLKQKAAQQAASSSGQGQQAQTPTGF", "length": 325 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MQ28-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "KEQVLQPTTVVSLEGAVAEISCNHSVSDVYDFFWYLHFPGFAPRLLIKGLGPSQQGRYNMTYERFSSSLLILQVQTADAGVYYCALRYTEAGHP", "length": 94 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MT47-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC112444909", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MLGCEGGKRPLKPPKKQAKETDEEGKAFKHKQKEEQKTLEGLKGQIMGKVPLATGGIKESGKQ", "length": 63 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q1MUP8-1", "protein_name": "E3 ubiquitin-protein ligase", "gene_name": "LOC100336539", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSRLTERALPTGTSNGAPSSRRAPVLTGTTVSNNDLASLFECPVCFEYVLPPITQCKSGHLVCGNCRPKLTRCPTCRVPLTSIRNLAMEKVANLVLFPCKYTSSGCGKTMPPTEKADHEEHCEFRPCRCPCPGTSCGWQGSMDAVVPHLMQHYNESIITLRGEVVVFLAVNINLAGTLEWVMLQSCFGFHFLLVLEKLEIYDGHQKFFAVVQLIGTREQAENFTYQLELNGNRRRLSWEATPLSIHEGIATALINSDCLIFDSEVAELFAENGNLSIDVTISMC", "length": 284 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0A3Q2TUK0-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC121109925", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDEKGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A3Q2UEY0-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418381", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSSYTIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A494C0N9-1", "protein_name": "Protein FAM246B", "gene_name": "FAM246B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATPGRPWAQARSAYRASEVLRRVTGRRRDPGPQSNGPGREDARAPGRLARLLRQLRAEAASRSEVPRLLKLVERAGAGAAGAGERTGAHSRGSVCSVCGEPRGRATYPAGVLEVSERRLQEGLAAVREELGAEIEALRAELRAELDALRALLPPPPPSPPARREPRAVPRAAPRGPTLLRTLGTVSALVAASRPADDAPDGPAECGAHRAPARKNHKKMPVPPGAPQGGGD", "length": 232 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A494C0Z2-1", "protein_name": "Speedy protein E13", "gene_name": "SPDYE13", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A0A4X1TRA8-1", "protein_name": "Small ribosomal subunit protein eS19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPGVTVKDVNQQEVVRALAAFLRKSGKLKVPEWVDTVKLVKHKELAPYDENWFYTRAASTPRHLYLWGIAGVGSMTKTYRGHQRDRVMPSHFSRGSKSVAHRLLQAREGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAAKKKH", "length": 145 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1TY10-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100627324", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MENYNQTSIYFILLGLFPSSRIGMFLFIIIVLIFLIALFGNFSMILLIFLDNNLHTPMYFLLSQLSLMDLTYISTIVPKMAYNFLFNDKSISFIGCGIQSFFFLTLAGAEGLLLAAMAYDRFVAICFPLHYHIRVSKRICVLMIIGSWIMGSINSFAHTAYALNIPYCQSRAINHFFCDVPAMLTLACIDTWVYESTVFVSTTIFLLVPFTCIAFSYGRILLVVHHMNSTEGKKKAYSTCSTHLTVITLYSAPFAYTYLRPKFLRTPTEDKVLAMLYTIFTPMLNPIIYSLRNKEVMGALRRVIQRICSVKM", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1U699-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSVSMSKFVLVGLHIWPEQQGMVFALFLGMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLAFSDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFFSCIDNLLLAVMAYDRYVAICHPLRYAIIMKEELCLCLLAGSWLLSCAYALTHTLLLAQLSFCADNIIPHFFCDLASLIKLSCSDTSLNELVIFSLGPAVFIFPLSGILVSYGCIVVSILSVHSPKGIFKALSTCGSHLSVVSLFYGTSMAVYLSSSSGQSHDKDTIASIMYTVVTPLLNPFIYSLRNRDMTLALQILFRNSNLLAK", "length": 315 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A4X1VK25-1", "protein_name": "Elongin-C", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RSYGGCEGPDASYGKLIASDKFIVKREHVLTSGAIKAMFSSPGQFAEKETDVVNFRETPSGIPSAALWKVCMYLPHKVCYTSNTSEIPEFPINSEFPIAPDIALEPLMAANLLDC", "length": 115 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A571BD55-1", "protein_name": "BTB domain containing 35, family member 26", "gene_name": "Btbd35f26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BF50-1", "protein_name": "WD repeat domain 88", "gene_name": "Wdr88", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKDNEEILNSPDQVRKGSPDVKKKKKIKKKRVKPKGDLDSKKLDFVEDSWWKGSLKNKNLDFAEYNWVLVDNRRVSVDSRKSSADSKRGSADSKRGSADSKRGSADSKRGSADSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKRGSVDSKNRFSPKKMDFSEDREISQPTFLRAQQSKVPWALMRALGLFKLSLPDIRRYYNLTSHDPLALDKDRQPREKSHMATVKKFWGNQQPLSKIPYKILIGHDHIVSSCHFCMNDTRFLSSSYDCSVKLWDAEDGTVIWDFEPRPKAPVLECSITADNRRIVASSYDKTVRAWDVETGQLLWKVRHDTFVVCCKFSPNGKFVLSALDVDRGIYLMDPENITTVIHMKDHHQRSITSCCFDPDSQKVASVSMDRCIKIWDITSRTTLFTIPKAHYNAISDCCFTSTGHFLCTSSWDKNIKIWNVHTGEFRNRGACVTLMKGHEGCVSSCCIARDSSFLISGGFDKTVAIWDVGGGYRKLALKGHEDWVTDVAISNNKKWILSASKDSSMRLWNIEEIDKIPLVSENKKAMGLKVRQVGIR", "length": 565 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG45-1", "protein_name": "BTB domain containing 35, family member 25", "gene_name": "Btbd35f25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGLQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A571BG86-1", "protein_name": "BTB domain containing 35, family member 8", "gene_name": "Btbd35f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESRHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A5G2QG78-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100523228", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTRGENTTNITDFVLLGFSDFPQIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHTPMYFFLRNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYFVCSTMGLSECGLMTVMAYDRYAAICNPLLYSSTMSPSLCGRMVLGSYMAGLSASLSQVCAMLQLHFCGPNVIHHFFCDMPQLLVLSCSDTFFLQLLTLVLTVIFGILNALVIMMSYVYIVISVMKITSTKGWSKAFNTCASHLTAVTLFYTSIIFVYLSSSSGGSSGLDRFAAVFYTVVIPMLNPLIYSLRNKDIKDAWKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QIN7-1", "protein_name": "ADAM metallopeptidase domain 7", "gene_name": "ADAM7", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSNSHYLSALFSREFLASNYSETYYSTKGEEVTTHPQIMDHCFYQGSIIHEFDSAASISTCSGLRGFFRVNDQRYLIEPVKYSDEGEHLVFRYNPKVQHAANYSCTELNFTRTAVLKDNTKSMEDSKMESIEKEKHIELFIVADNNVYHRNPNSKVRNRVWGMVNFVNMIYKTLDIHVTLVGLETWTNGDKIEIDSNIETTLKRFSAWQEIILKKKKNFDHVVLLSGKWLYTSAQGTSYPGGMCLPYYSSSVVKDLLPDLNTIASRMAHQLGHSLGMKHDDYPCTCTLGKCVMDSGGSIPALKFSKCSRTQYQQYLKDFKPTCMFDIPFSDKLSDYPYCGNKKLDDGEECDCGPVQECTNPCCDARKCMLKPEFTCAEGECCESCQVKKAGSLCRPAKDECDFPETCTGHSPACPKDQFQVNGFPCKDAKGYCFMGNCPTRDDQCSELFDNEAKDSSDICYKMNKNGNKFGYCKNEEQTLIPCEEKDVKCGKIFCTGGKHASILGEEKVYHLKKPLTQNVTECKTFFLYHKSKDFGLVAPGTKCGEGKVCSNSECVTIEKAYNSTDCPSPCNENAVEDGDLGCQCEGVQASVDWEETLNVTNISILVVVLILVIIGVLSAVLLIRYQKCIKLKQVQRPPSEALGVENKGYTGDEQQTRTEPILPDIHPLHRRTAESLARLPTSFSSPHYITLKPASKEPRGTADPNPSAKVSLKLDIQNGCASLS", "length": 725 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QM02-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100623139", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTGGENTTNITAFVLLGFSDFPHIRAALFVVFLVIYILTLTWNLCLIVLIRMDSHLHIPMYFFLSNLSFIDICYVSSTAPKMLYDFFQAKPTITVVGCAIQYVVFSTMGLSECGLMTVMAYDRYAAICNPLLYSSIMSPSLCGRMVLGSYMAGLSATLSQVCAVLQLHFCGPNVIHHFFCDMPLMLGLSCSDTFFVRVLTAVFTVIFGIINALVIMMSYVYIVISIMKITSAKGWSKAFNTCASHLTAVTLFYTSGIFVNLNSSSGGSSGLDRFAAVFYTLVIPMLNPLIYSLRNKDIKDALKRLKKRKECC", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QUE5-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524011", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSNVSKFLLLGLPIQQEQQGMFFALFLGVYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFASVTVPKMLMNMQAQDHSISYAGCVTQTYFFMFFACIDNLLLTVMAYDRYVAICHPLRYTIIMREELCICLLAGCWLLSCAYALTHTLLLAQLSFCVDNIIPNFFCDLAALLQLSCSDTSLNELVIYTSGAAVFIFPPSGILVSYGRIGISILRVPSTKGICKALSTCGSHLSVVSLFYGTIMALYFSPSFGQSHYKGIIASVMYTVVTPMLNPFIYSLRNRDMTLALEILIRNKNLFTT", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2QWK6-1", "protein_name": "Calmodulin 3", "gene_name": "CALM3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VSAEREEEGVALKFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEVTASPVLGPAREGPRASAPSWGGKQPLAIACNQPRRSSGFSWDLPSFENLLSSTLWSPASGDGRGVEHSGRPS", "length": 214 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2R7Y6-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524140", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLVAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINHLSGTKSISFVGCATQYFLFLSLGGAECLLLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIVLISASYVFILHSVIHMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A5G2RGH3-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100524855", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGRRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLSQLSLMDLMHVSTTIPKMAINYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYTVLMNRKVGQMMAVTSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYETAVYISDIVLLLLPIILISASYIFILHSVIRMHSAGSKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALRRVLGREMITQNPKVRLP", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A668KLA6-1", "protein_name": "Predicted gene, 52955", "gene_name": "Gm52955", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMGALLANSPLLLCWLVFGAQLSVGEGILLTLTLMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKQCGVFFFALNLALFGIFAFAQCFNPLVYGLHNRDLQSKLYPSLCCQKKLLP", "length": 296 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KLA7-1", "protein_name": "Predicted gene 7582", "gene_name": "Gm7582", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSSSEHCNVSDWLRLEATVKASVYVVAFSITTSLTIVIIAIVSQSLQLRKEVRLVLLCHHLLCISSYCGLGVVFQGMWALLANSPLLLCWLVFGAQLSVGEGILLTLTFMALNTYLAICYPLNSPSFVDSAKYRILAGTWTTVILKNVGLFLIEGTSPTPASVFQSAPLCPVILNGMPARVIGMFSLAFLLSVILVSYCLIYREGKRAGHFNKSNIKARRTVLVHLLQISLHVIPTLIIIGLGKRCGVFFFALNLALFGIFAFAQCFNPLFYGLHNRDVQSKLYPFLCCRKKLLP", "length": 296 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A668KM50-1", "protein_name": "RIKEN cDNA A930007A09 gene", "gene_name": "A930007A09Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSLSELPQKNTDLAEMQSGPLGRCSHFFWLGVAFDAVGVAVLFTGVFANLLFYDMLLYLGSIIIFVSLLWWISWYTGNIEALPEDPLRGTSPRESGVHRSGSRRFSLTLRSVSDTFQRIRRRRRRRLHPRVVQRISSISSTDPGQLERNCDARTSGGRALFRSAKPEAVLNQFSRVQTSKSLPLGIVHTGLSICTSRSQPVFSVTSQTYPLASDSNSQMAMSSDSHVYLDSHSQEHSKISVASQIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVATQIYPLEREESQSHFLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASKIYPLEREESQSHLLVIPDSLSMVPVTSQSQILPSVSSESCVPLGPHSQGRSKISVASQIYPLEQEESQSHFLVPMPSDSFPVVPMTSQSQIQGSLAQQSHLQNLPLASQTPETDKASKSHTLAKGVPGVPPGSAQTQHPQASLAQTSQISSPVRKVPKN", "length": 636 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0A8C2LDI6-1", "protein_name": "Large ribosomal subunit protein eL33", "gene_name": "LOC100774916", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRLWCKAIFAGYKRGLCKQRGHTALLKIEGVYARAETEFYLGKRYAYVYKEKNNTVTLRCKPNKARVIWGKVTKAHGNSGMVHAKFRSNLPAKVIGHRIRVVLYPSRI", "length": 110 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LMV8-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC100755948", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTNTEGKRRGTRYMFSRPFRKSEVVPLAMYMRIYKKGDIVDIKGMDTVQKGMPHKCYHGKTGRVYNVTKHAVGIIVNKQVKGKILAKRINVQMKHIKHSKSRDSFLKQVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPQLLEPISYEFMA", "length": 160 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LSR6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "LOC100751955", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQDEGEKENPMWELHICKLCLSICVEESRDRLTRAAKVLEQLKGETPVFSKARYTMRSFGIRSNEKIAVQCTVHGTKTEEILEKGLKVQEYELWRNNFTDTGNFGFEIQEHIDLAIKYDPSIRIHGLDFYVVLGRPGFTIADKHRTGCIGAKHRISKEEAMRWFQHKYDGIILPGK", "length": 177 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LUM6-1", "protein_name": "Tubulin alpha-1C chain-like", "gene_name": "LOC100757824", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MCECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETDTGKHIPRVVFVDLEPTAIDEVRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSRFTSLLMEWLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYPTPLPE", "length": 288 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2LZU4-1", "protein_name": "Glia maturation factor", "gene_name": "Gmfg", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSDSLAVCEVDPELKEKLRKFRFRKETDNAAIIMKVDKARQMVVLEEEIQNVSPEELRLELPERQPRFVIYSYKYLHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRATDDLTEAWLQEKLAFFG", "length": 142 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2M625-1", "protein_name": "U3 small nucleolar RNA-associated protein 15 homolog", "gene_name": "LOC100755487", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIQTFREHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDARTNKNVLCVEHGQPVESVLLFPSGGLLVSSGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALSHEDETIVVGMTNGILSVKHRKSEAKKESLSRRRRPAYRTFVKGKIYMKQRDDIMINRPAKKHLEWYDKDLKSFRISKALDRVLEPNCVIKTPEVTVSIIKELNRRGVLANALAGRDEKEITRVLNFLIRNLSQPRFAPVLINAAEIVIDIYLPVIGQSPVVDKKFIVLQGLVEKEIDYQRELLETLGMMDMLFATMSRNDSVSLSENVPAELPEKTESPCQPGDTDKNS", "length": 527 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8C2MXE3-1", "protein_name": "Glycerol-3-phosphate acyltransferase 1, mitochondrial", "gene_name": "Gpam", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDESSVTLGTIDVSYLPNSSEYSLGRCKHATEDWGDCGFKTTFFRSATLKWKESLMSRKRPFVGRCCYSCTPQSWERFFNPSIPSLGLRNVIYINETHTRHRGWLARRLSYILFVQERDVHKGMFATSVTENVLNSSRVQEAIAEVAAEMNPDGSAQQQSKAIQKVKKKARKILQEMVATVSPGMIRLTGWVLLKLFNSFFWNIQIHKGQLEMVKAATETNLPLLFLPVHRSHIDYLLLTFILFCHNIKAPYIASGNNLNIPIFSTLIHKLGGFFIRRRLDETPDGRKDVLYRALLHGHVVELLRQQQFLEIFLEGTRSRSGKTSCARAGLLSVVVDTLSSNTIPDILVIPVGISYDRIIEGHYNGEQLGKPKKNESLWSVARGVIRMLRKNYGYVRVDFAQPFSLKEYLESQSQKPTSAPLSLEQALLPAILPARPNDAAESEDTSSNEPRNTADEAFRRRLIANLGEHILFTASKSCAIMSTHIVACLLLYRHRQGIHLSTLVEDFFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRKDEFFITPSTTVPSVFELNFYSNGVLHVFIMEAIIACSLYAVLNKRGSGASAGGPGSFISQEQLVRKAASLCYLLSNEGTISLPCQTFHQVCHETVGKFIQYGVLTVAEQDDQEDVSPGLAEQHWDKKLPEPLNWRSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPVPETEYLQKLHRYLITRTERNVAVYAESATYCLVKNAVKMFKDIGVFKETKRKRVSVLELSGTFLPQCNRQKLLEYILSFVVL", "length": 827 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8D1BQI2-1", "protein_name": "Uncharacterized protein", "gene_name": "LCE5A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSCQQNQQQCQPPPKSLPKYSTPKFPGPCPPLVSSCCGSRSGHGRCYSSGGGGCCLSHHRRRRYHPCQPQSSNCCDSGGGQQSGGSGCSHSSGGSGCCSGGCC", "length": 103 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8D1VKI8-1", "protein_name": "Uncharacterized protein", "gene_name": "NCR3", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARMLLLILIRVHSGSCALWVSQPPEICTQEGTPAFLPVPSTPARGDWPLALSHGTGTNWPQGRRVVVLGQGVRTGNGTPLVVERGPAQLATPTIFLLRAGFYAFGFLSVAIGSTIYYQGKCHRHMGTHCRSADGL", "length": 136 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8I5XVN6-1", "protein_name": "SPATA31 domain-containing protein", "gene_name": "LOC689526", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MESFLLLMNSAIESWMNTSTMDIATDLSIAILCGVGLFFLLIPFLKDCPLSPASGNKTDIPKDVKRGRSNTRRKTDVEKGCRDGGKTVEETKTPSQPMKILTRQLLQDSTPQIFWNSSQKLDHLLLSQLFSSLTSLEDLILQKFNRRFWGTSSIFSESVVAMAHVLRNPSFPQQKSVRFSDPCVTDQAPSQAQGLRQQHRYHPRLHRQRKTSLVGMTWVPEKKILPISTPKQIHPCLKRRAYGVSCPTTEKGIQTSLPPECLSHKHGLYSKAVKGYVKRNHQKAIGKPPGNWLRDTLKTKAIRPASILSEHLRMFLHHKEPQTKDKATNVEKQQGTCIRSPPSKKLKQFQGRFPPNTDHYCKRRPQLSQPGQPSILNSKSYKLRKIIQSVLAGMTLMKDRADFSMQSQFSQAPQSSVCNAKRYKYSKRMGSVPRRVPLKKDTARYDMGKPIKKCLGAGTKNVPHSACSILGKRLRARNLALKKGQASVMNPTGNYCLHDSKAEMKLASNNTALPVQCRRTPYLQILEALNPIPPGVLASKLPRIVFPSSPICDFKEEYYSKAATVLKNLHHQDPGGTRVKSTSAASLESALSMCSAAKIQKTQRAPPPAASRGLSKAHTDLLKRHLSIQHSALYFEQGRIIQGTGKGSLQQNTNPQKAKHAPLKSFHEGDSRHHSWNGTMVGPGKRVPPAAAKQTKAVEVKKETPYAWSLGSNESHTGKDINISPRVFGSLGAKRSPGHLQTCTPQHSQDSTLRTQGHRNIILCSNKQPQPRPGRHDPECPSTVHPAKVNLSSEHSMSSFQNTCQKPKTAQGSCERADTKENRVLKDKIRINHLKDLCPHKERQGSIRPTAISQGGRLGRSRPCSLSSTQLKDTAKTRTSDKRQATSKSSWKSDIREVLKYGYVGSKDIIGQEDTSKKDQPPAVTERTEEDWTGEKAMCNMIAHLQYLTNFLFEIMEDTEWDPSKLQGCEVESLTFQLGSSSDSSEGDDDINQGTSTSTMSFGQTSPEMHNCSFTKTGIGDKTQSEIKAKTACDQHLNQVNRGMFSDQLPMPKEYDLSCRYRGIQHQQELGLPDQTFYQYKLRMTHCPHGGTKGHNYSFGYRKLGDQQQPDFTHKALDPHQSAKEDMGCVSCLSPKGSRPVKHRRTDCFSP", "length": 1151 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5XWP3-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "ENSRNOG00000063695", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQRDMCHMTPYRLLCVLVALALSGCNVAQEVTQVQSTASRQEGEEVTLDCSYETSYVAYYLSWYKQHLSGDIIFLIHQISSSTAEERSGRYSLVFQKSLKSISLVISASQPEDSGKYFCALSDLTQC", "length": 127 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y4M0-1", "protein_name": "Large ribosomal subunit protein uL14", "gene_name": "LOC108350588", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSEQRRGGSSGAKFRISLGLQVGAVINRADSTGTKNVYIISVKEIKGRLDRLPAAGVGHMVMATVQKSRPQLRKKVHPAMVIRQQKSCGRKDGVSLYFEEDAEVIVNNKGKMKGSAITGPIAKEHADSWPRIASNAGSTA", "length": 140 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y5C9-1", "protein_name": "Ribosomal protein L32 like 2", "gene_name": "Rpl32l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALRPLMKPKIIQKRTKKFIRHQSDRYVKIKRNWRKPRGINNRVRRRFKGQILVPNIGYGNNKKTKHMLPSCFRKFLVHNVKELEVLLMCSKSYCAEIAHNVSSKNRKAILERAAQLAIRVTNPNDRLCSKENE", "length": 135 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y6V7-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "Pate4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNTEPLFDIVINCPIAPQFILKILLFPYPANTNLICNTCNRSENSECKNGTGQCTAPEGGSCSTISIYHGQRHVLSKQMCLGHCEEKPHYNGDFMIYVMCCSKNLCNSF", "length": 110 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5Y7P1-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "ENSRNOG00000069815", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEREKEQFCKLFLGGLSFETTGESLRNYYERWGKLTDCVVMRDPASKRSRGFGFVTFSSMARPHSIDGRVVEPKRAVAREESGDPGAHVTVKKLFVVGIKEDTEVHHFRDYFEEYGKIDTTEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSGQEMQKAQSSRSGRGGNFGFGNSRDGGGNFGPGQGSNFRRGSGGWESSDGYGSGRGFGDGYNGYGGGTGGGNFGGSPGYGEGRGGYGGGGPGYGNQDGSYRGGYDNYGGGNYGKGNYNDFGNHNQQPSNCGPMKSGNFGGSRNMGGPRDEHRSFPSWKGYNGVFGKQSPLTWIKTHSL", "length": 347 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZKP8-1", "protein_name": "Glycerol-3-phosphate dehydrogenase [NAD(+)]", "gene_name": "Gpd1l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSEEAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHKICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAAGEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNGLHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEAKTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEGRPSTEILTCLQNHPAHM", "length": 351 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZL63-1", "protein_name": "Ankyrin repeat domain 13a", "gene_name": "Ankrd13a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSDQSRKAAAEGGSSPMVWSRPARAPPGGRADGRGPIVERTTGEGRAGDESRRARTVGFVRGDLGLPKGPAVPQNGGGRVSRRGGLVGRHGAGLGPFRKSGPPPRSVMERLAYFPVRGGSAGSSRFASCQRGRERAGRGVGAAERVPEPVPSPARDPGPPAPPAPDSEALVVRCARHLAARRSPPLALRPVGRAPETPSGGSRLVAGGRSGLGGDLLAMSSARDTSSRFPLHLLVWNNDYRQLEKELRDQNAEALDPRGRTLLHLAVSLGHLESARVLLRHKADVTKENGQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLHKILEAPDFYVQMKWEFTSWVPLVSRICPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSLIFKGGDNWAELMEVNHDDRVVTTEHFDLSQEMERLTLDLMKPKSREVERRLTSPVINTSLDTKNVAFERTKSGFWGWRTDKAEVVNGYEAKVYSVNNVSVITKIRTEHLTEEEKKRYKEDRNPLESLLGTVEHQFGAQGQDLTTECATVNNPTAITPDEYFDEDFDLKDRDIGRPKELTIRTQKFKATLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLDFPPGFPVKIEIPLFHVLNARITFGNVNGCSTAEERQSVEGTQAECAASDATNFEVDQSVFEIPESYHVQDNGRNVHLQDEDYEIMQFAIQQSLLESSRSQDLSGPASNGGVSHAHSYEAQYERAIQESLLTNMEGRCPGGLSDSSRFDSDLRLAMELSAKELAEQELRLQEEEAELQQVLQLSLTEK", "length": 809 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZP24-1", "protein_name": "Large ribosomal subunit protein uL30", "gene_name": "ENSRNOG00000064315", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAVPEKEKKVAAVPGTLKKKKVPAVPETLKKKRRNFSELKVRRLRKKFALKTLRKARRKLICEKAKHYHKECRQMYLTEIRMARMARKAGNVYVSAEPTLAFVIRIRGISGVSPKVREVLQLLRLRQILNGTFVKLSKASVKMLRIVEPYIAWGYPNLKSVNELIYKRGYGKIRKKRIALTDNSLMARSLGKFGIICMEDLIHEIYTVGKHFKEANNFLWPLKLSSPRGGMKKKTTHFVEGGDAGNRETR", "length": 251 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZPV0-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ENSRNOG00000066253", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIVQRIFRLSSVLPSAVSVHLRSNPGVTAVAFNKEPDPVQKLFVDKIREYKTKRQVSGGPVDTGPEYHQDLDREPFKLKQLYGKGEMDKFPTFKFEDPKFVVIDKPQS", "length": 108 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZRI3-1", "protein_name": "Natural killer cell cytotoxicity receptor 3 ligand 1", "gene_name": "Ncr3lg1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLRKCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHEDVTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHGDASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKLIICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPALEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVTIIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRC", "length": 371 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZS91-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134482834", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPTETEEELPTPTPKPSISEEGNFHSQYQVLGTSGQGGNGKVLLAHNRLTGTPVAVKVLRKDKQWFQPAMMEANIMRKINHPNIVSLIQVIEKETRIYLIMELVEGQELYQYIRESGHIEEDEARQIFEQILSAVSYCHGKGIVHRDLKLDNIMIDKNKKVKVIDFGLSTQFPPGKMLNHHCGTHSFGSSELLLGHRYDRPKNDMWIIGVVLYCMVVGKLTFDSVIIQDLQRQVVAGVYPAPCGVSKELEDLLSKLLRVNPNFRPTARKAMKHPWFKEHWNGLIVPYEELLPLTPDPAILDAMKSIGLQASVVKHTLKQRKYNEEMATYFFLQKQALQGDGCTAQAQQVSPVAAPFPSLDPAAAFRLEPKRSGSLPVLGTLRVSSSHGHVSHYGQNAHPKGGKRYTVAGRLRPLPMTPTQDHYHKCAVSVPCIQTTSIFSEKSSNKKIKEDNPLSHRAPLEDKPIPSRVRHRGFKGWTRNIANALIKLCCCMPRRKKPRLGQNRISPQK", "length": 509 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZT61-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC134479845", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDITSIKKTLGSQYRVAFFLGQGSYGSVKLAWHRRTQALVAIKTVEISKNTIRAILSEMTTLELLHHPNIISLFQILVTANQIHFILQYAPGGNLVQLISEEGPLPEEKAKKMFGQIVSAIRHCHSLDIVHRDIKPQNILIDGEGNVKLIDFGLAVKCRPGTLLSRHCGTRGFNAPELVLRQPYDGKSSDVWSLGVLLYFITTGYFPFRGNTIDEIEQKITTGTYTVPHHLSGQLENLIHQIFTVSPEMRPSIEEIENHPWIKKCELKIPPMSDPDYKIIEMLCGMGYNAKDILESLQKKRYDEPMGAYLSLKNHVSEGYDLASITPTKPGDPCPPPPPSPAHPSVFGLPLRRRASEPNFGLLHRQPSREQNPLDLILSGLNMGRCVSMPPIAVYYPKKQRSTSTRALHSRPVASPCVYNNMLGVEIILPHKQDIEMNTSSPPQTMGWFKRLRKGIGDCFSRLCCFPRAPKKKTQHRSSKRVAPLKKAASSTI", "length": 493 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZXB5-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb2l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLSSLPGRNLAMARLLLLLLSAACLHTGNSAGYQEKNDFGVDQPDVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKHYHGEFIYTSTRPFIHEHFKGRLIMNWTPGQTSGVLRILNLKENDQATYFSSVFLQTPEGMKLWQSIPGTKLIIHALDTTMRSPSIIPSVVPTDDLEYTQGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZY57-1", "protein_name": "40S ribosomal protein S26", "gene_name": "LOC134478821", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPGPRRPRQEAGSKPRELQQRVLASVKRRCLFSSLGSNTTKKKRNNGRAKKGHGHVQPIRCTNCARCVPKDKAIKMFVIRNILEAAAVRGISEANVFDAYVPPKLYLKLHYCVSCAIHSKVVGNRSCEARKDQTPPPRFRPSGAAPQPPPKPM", "length": 154 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYE5-1", "protein_name": "Oligosaccharyltransferase complex subunit", "gene_name": "Ostcl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METKHSALLRTFPFLVLECPNLKLKKPPWVHMLLAMTMYALVVVSYFFITGGIIYDVSIEPPSVDSMTDEHGHQRPVAFLARRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLSGFLLLFDFVCVLLSFFIARVFMRMKLPDCLMG", "length": 153 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYN2-1", "protein_name": "Non-selective voltage-gated ion channel VDAC2", "gene_name": "AABR07051831.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAECCVLVCPRPMCIPPPYADLGKAARDIFNKGFGLGLVKLDVKTMSCSGGEFSISGSSNTDTGKVSGTLETKYKWCGYALTFTEKWNTNNTLGTEIAIENQICQGLKLTFDTMFSPNTGKKSGKIKSAYKRECINLGYDVDFDFDFGWLAGYQMTFDSAKSKLTRNNFAVCYRTGDFQLHTNVNNGTEFGGSIYQKVLCEDFDTSVNLAWTSGTNCTRFDIIAKYQLDPTASISAKVNNSSLIGVGYAQTLRPGVKLTPSALVYGKSFNAGGHKLGLDLELEV", "length": 284 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZYX3-1", "protein_name": "Methyl-CpG binding domain protein 3 like 3", "gene_name": "Mbd3l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LGELGNAGRLTGSMIPSRLQKRRKIQVAKSKRKAKHKSGTTLRNPLRLTSCIFPQPVTVITSYPENKTRYRRDEAKLKKPQQLCALERLKNFQFGGDSKENLSCPLELANAVERIARGMQDEASNQSGDKDQLTSGQVTSDQPPYLETNEHVALQLSPSFSSQGVTLPVPLHLSPSYFLRKVTTGDIQRQAWKVKKARKRLAEALEADRLARQTENMRE", "length": 219 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZU9-1", "protein_name": "Keratin-associated protein", "gene_name": "ENSRNOG00000070302", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "SPSTCELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVGSNSLKSFGGFTGSLGYGNSGFGSFGFGSCGIRSQGFGCNFHRPGYFSSKSVQSSYYQPGYTSGFC", "length": 127 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I5ZZY5-1", "protein_name": "Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein", "gene_name": "ENSRNOG00000064452", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKIKAVTEESEAQGEGCSQQHRYQELLVYLNPIAQHPGFPPPDLRKIEKGKKKKKRRPTKQKQIRHGVKEVQKFVNKGKKGIMVLTGDTLRGTAIFQLCARTRICPTSIFPLTDLGAAMGSKHPTCVIMVKLHEEYHEAYDKCLEEVQTLATPL", "length": 155 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A2Z7-1", "protein_name": "Developmental pluripotency associated 1, pseudogene 1", "gene_name": "Dppa1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPPQVLISGLLLLLPAAWTTTVTSSDQLWNNHTEVVPTQSPLKISTKDLYIGTSVSAALLILLAGVLAVLKYRHRRKKILESAVVFHGFQNGVFQSTEQSQAVDVYVIEDSKVPVAH", "length": 118 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3D9-1", "protein_name": "Small nuclear ribonucleoprotein Sm D3", "gene_name": "Snrpd3l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSIGRPIEVLQEAQGYMVTRETITGEVYPGKLIEAEDNMNCQMSNITVTYRDGPVAQPEQVYICDTKIRFPILPNMLKNAPVLENLKNKNQGSRAGQGKAAILKAQVAARGRGHEMGPWKLPEAKTVFSIKENFPSCLLLGF", "length": 142 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3N0-1", "protein_name": "Uncharacterized protein", "gene_name": "Pramef20-ps2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQTPPTLEKLAIQSLIRNEDVAMSSLGELPAVLFPALFKEAFTGKHINLVKEVVAAWPFPCLLVGALMKTPNLETLQAVLDGVDMQLTRKFHTRRTKLQVLDLRNMHHYFWNIQAGEEDSSCSAENSKEKKVVKVFHRYALRKRVKVIVELYIHSCLKEEQTCLLKWAQQRKGSLHFCCTKMKVWNLSLCGIGEILKVFDPQHITELELHTEWTLLELAHFAPYFGQMRNLQKAFLAPLHRIMFSNSNGKRDREAKCIKKFISQFSKFNCLQHLHMFCVHFLRDHMNQVLGCLMTPLTLSITYYLISQKDLDSLSRSQSLFQLKHLDLRGVVLCDLDIMPLRGLLEKVADTLETLDLQWCKMTDSQLYALLPALRHCCQLTMVNFYSNNFSVPILKDLMQHIANWSRIRVQQYPAPLECYDDLAQVSVKRFAKLSSELMYTLGVIRQTKNISFATDICHTCGQRCVYHNGSRLCCCWH", "length": 480 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3R7-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "LOC120093241", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAARKALTVVAVLGSGAGVGSILFALVTPGELQKQLMLQEMPERDSRRRDAAVRTKELVMATLKDAAATKENVAWRRNWTVRGDGRSA", "length": 89 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A3T5-1", "protein_name": "Large ribosomal subunit protein mL62", "gene_name": "Mrpl58", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EHGGRLGPTLEPEPSWNLVAPAARALCSPDSAQTGERHRVQEHLQPGQAVPRIQGRGYRLEGPGEPRKAGRKGRFLLLLDRLSISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRQKIALTHKNKINKAGELVLTSESSRYQFRNLAECLQKIRDMIAKASQVPKEPSKEDAQLQRLRIEKMNRERLRQKRINSTIKTSRRMTMD", "length": 211 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A478-1", "protein_name": "T-cell activation Rho GTPase-activating protein", "gene_name": "LOC134485907", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGEIHRTLLCQGPVELTSGRKRNKRYLSLFDDVLVVSTNLTKKKFKIKCIIPLNYLWVVDDVELVRANQTCTCKTIFFYWATGNALATFRSKEQKVQWYTFLTRSINEAKKGIKKTFPLHIFPEDIQTCDSSLCVTATNMDTVNDIMEKLLPMIRVHNIEDYQLWFSPGHKETPRALQGHEYPYDIIMNNVQNNLSKSNSKIFTAFPPLPGLFMENQSWDTGGQFILKPRDSAGSQQQDAKERPRKSCMTSCFHGGSVPHHDQECSDPRDDKRGKLFGQDLSSICQDGKLPTIILDMLSRIKDKGPTTDDIFLITPNGSLCKTIKEKLDNGENVDIYQQPVHVVAWILKEFLQSIKGSLLTSKLYDQWLIVPEKVNDKEKLAAVKSLLEKLPKPNADLLRQLFRILHQIKTNSSVNNMSSFRLSLETAPCILWLPSYRNNILTNDIAKKISLVTFMIDNSPELFGEDIVAVWYETSLYHPPGLKYPCSQNTPSSNGIMEETEHGLSSCPGERTCTPDFDELPRSGAAASIPYEGILASEKGEGNESTTQPEPVQNSPTPQTKKELGNCSPNILKDVNVPAVILDMLSVIAEKGQCSDDIFRMQSEKSHWSLKEKVNTGKHVNLKEESVLTVASVVKDFIKNIEGSLLSCDLYENWLSIPDEGPLLGKIASIQNILLKMPKPNYVLLKQLICVLQKIKAASTNQLDTFDLSVRIAPHVLWNPTCKTLFGRDLSKKLSIIKFMIDNCQELFGENDNIFCEDNQKSYDINLSSDTLNTSGKATLMIETIDDHDVKTSKSNTKKLEMSSAVPHEGGPTAGHNGTTSKYNVPQEKILHD", "length": 834 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A4C1-1", "protein_name": "RRM domain-containing protein", "gene_name": "ENSRNOG00000063783", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LTCCAINSDPHPDSGLKMEGHDPKEPEQLRKLFIGGLSFEATDDSLREHFEKWGTLTDCVVMRDPQTKRSRSFSFVTYSCVKEVDAAMCAQPHNVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIKTMEVMEDRLIDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGNFMGRGGNFGRGGNFDGRGGYGGGGGGSRGSYVGGDGGYNGFGGDSGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGGGYDSYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGRMKRGRFGGRSSGSPYGGGYGSGGGSGGYGSRKF", "length": 350 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5E5-1", "protein_name": "Paired immunoglobulin-like type 2 receptor alpha", "gene_name": "Pilrb1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQILLLLLSATCLHTGNSGGYTRKNYFGVNQPAVLSGVQGGSIEIPFSFYFPWKLAKDPQMSIAWRWKEVHGEFIYQSTLSFIHEHFKDRLILNWTQGQTFGVLRILNLKENDQATYFSQVCLQTTEGMKCWQSIPGTKLIVTHGVICSLLISPQLSYDHEDPLHHHLCRPHSWPGEHKGPKESFTAEPGGHHWDGRGQSCSHHPPLRMDDLSVVEAKASRVTPKPQPE", "length": 230 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A5T5-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "Rpl21l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAKEKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA", "length": 160 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A8T3-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RMNCSQAPGFILLGLSRDPEKWQLFFSVFLVLYLLGLSGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKILQTLWTGDGSISFSGCLTQLYFFAVFADMDNLLLAVMAIDRYAAICHPLLYPLLMTPCRCGVLVSGSWGVAHCVSLTHTLLLSQLYFHTNQMIPHFFCDFGPLLLLSCSDAHLNEGLMMALAGVFGISALLCIVSSYSCIFYAVARVPSAQGKRKALATCSSHLSVVLLFYSTVFTTYLKPPSSSYSSGEVVAAVMYTLVTPTLNPFIYSLRNKDVKSSLRRILNMVKSPD", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A969-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000067430", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFFLFWTFPGLELDKLALLSFESSSSIHPRACASTPAFQRSHNPGDAAQQEAKQREAEMRNSILTRVLDQSAWVRLSDLALVKPDKTKAVEHRVQMARYGQLSGTVSEQGFIETPEKVSQQTEEKATVKFNRREVTDSDEDDDY", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6A9H4-1", "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "Art3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQATARGVIKRKAFPGRQLSLSTTSCPGGKITPAESGNRFESGHHLNVLQRHKRQKRKMKMGHFELVTTLLAAMVLMDVFQVQAEVLDMAENVFDDEYLKCNSRMEMKYIPRMHGEELANDELLQSVWDKAGIQWEAQKAQLSLPKNFKDAYGIALTAYVTEAQDQSPFYHTFNRAVKIAGLSRRRYIYNFPFKAFHFYLVRALQLLRRPCEESYKNVVYSTSPNISFAFGEQNQARLGNFTLAYSAKPQTANEQRLLTIQTCFGVAVGKLLNKESEGIVLIPLSEVFQVSRKGTDDDLILHSINSTCSYYECSFLGGLKAGSCTTNPENPDPGYLNNPDLDSQKLEDSGRKSLDSVKMPEIKVLQGEENPLLPDEKPEDRNRGKANVPTPGLVPVPGPKSHPSSSSGHRLLPSDTASTILLIAAAVDFIAL", "length": 433 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AA84-1", "protein_name": "Ankyrin repeat domain 10", "gene_name": "Ankrd10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSAGAGAGVEAGFSSEELLSLRFPLHRACRDGDLVALCSLLPHTPRAHLAAEDSFYGWTPVHWAAHFGKVGAGTLRRHFPRGVLLGSERTPPCLESAATARSAPPAPPEGSRAHVQQSGLGVKGWGRGGAEAALAPPGVQGACAAARSPGPRGARGVMGGGAEMGSVWPAPRRTQGACAHLWLFRAGRADRMQLRRFARRPSGFGEWCGRLLLEARREPGASRSCLMETGRRAPLRHKGMDAALAAGGVRSAPAVVDGGLAARPTGPLSQLGPPCLECLIQLVRAGASLNVSTTRYAQTPAHIAAFGGHPQCLVWLIQAGANINKPDCEGETPIHKAARSGSLECISALVGNGAQTDLRNASGLTAADIAQTQGFQECTQFLLSLQNHQMSRFCPNGTLSGGHENILPNHINLGTNRKRCLEDSESLGVKKARTRVPSLDHTMPLANGDAEDDADRMHVDREFAAVSDMKNSSSVLNTLTNGSVINGHLDFPCVAQLNGMESRSDPCLTGSNGISNGQPFPSGQGPVCANGTEEPEKTMGVNPEMCGSLHLNGSPSSCVASRPSWVGDIGESLHYGHYHGFGDTAESIPELSSVLEHSSCVRVEQRYDSAVLGAMQLHHGS", "length": 621 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ABF4-1", "protein_name": "Nuclear transport factor 2", "gene_name": "AABR07018058.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGDKPIWEQIGSSFIQNYYPLFDNDRTQLGAIYIGASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSIMAQQYQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNSS", "length": 127 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC04-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r38", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSMLSQNKTLKSIEEVALHVILLCQVGVGTVANFLLFIHNFSVILTNCQLTPIQVIVTNLAVASAFNLLLLAFPNNVTLFVPRKAPSDLSCKLWYFICLVARSTNLSSTCVLSTYQFVMLLPGNWSRVILKGRAPKIVNYSCYGCWIFSVLNNAYIPVKVSGPQKTQNDTDFKDKWVCSTSGFSVGMSFLRFAHDALFISIMIWTNVSMVILLNRHHHRLQHIHSSNQDHRAYADTRAAHTILMLVVTFLSFYLLDCICTFFHISFVDSRLLLRRIKEVLTASFPTISPFLLIFRGPKNPCSLLSRS", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC51-1", "protein_name": "Non-histone chromosomal protein HMG-17", "gene_name": "Hmgn2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAPAKKGEKVPKGKKGKADAGKDANNPAENGDAKTDQAQKADGAGDAK", "length": 90 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AC66-1", "protein_name": "Eukaryotic translation initiation factor 6", "gene_name": "Eif6-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVVRASFENNCEVSCFARLTNTYSLVAIGGSENFYSVFEGELSDTIPVVHASIASCRIIGRGTSVWGTGMGYWYPTTTTDQELQHIHDSLLDSVQIRRVEEGLSALDNVTTCNDYVALVHPDLDRETEEILAGVLKVEVLTVADQVLVGSYCVFSNQGGLVYPKTSIEDQDELSSPLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDRLT", "length": 245 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ACC5-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000069094", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LPLLAFEKYVVCDGELQRLQVSCEVLGDVDPPQRLSASVVQMKQSVVEFLGTLVEQDAQGAAEDMDNALVGDNEEAEGENNSTRTNSDGPFTERPNQRLNNR", "length": 102 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AEL7-1", "protein_name": "Protein phosphatase 4 regulatory subunit 3C like 1", "gene_name": "Ppp4r3cl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEDKLYRVKVYVMMEDKQWKDIGAGQISSKYIDRLQGVCLLVHSESDGSPILECKIQPNVPYQKHQGKVIIWSEAKNHGTAIHFQEPNDCQETWEVICQVQGKDPNVEITQLLTDDLESFKDMLLSWNKVEMSSCELHTLENIADLLSFVNEAPSHKKILTLVLEKEGYIKKLLQLFKTCEKHQNIDGLHYLNNIIRGILFLDNIHLFNIMFSDEFIMDVVGCLEYGPGLDEPKQHRQFLTQNVKFKNVMQITHSQLRKKIQQTYRMQYIYDIVLPTPSIFEVNLLHDLSTMIFFNKIEIITMLQEDEHFLLEVLAQLKDNTVSNERRHELLLFFKEFCAFAKTLHFQKKNTLLKTLIKLGIISALKVVVHMHDYQIQVAALELFAHLVEYSPRLIRAYAMKEAQYSEDNDGLLINIMIKQMTCDSDPEFSRSIILTTVLHAILDPENMRVTTKGHERRKFLNYFYRHCMNKLIEPILSITVENNSDDNRVNICPDNYQNAQLLGAILEILTFCVQYHSKYVKNYIISKNLLSRILILMSSKHTFLILCAVRFMRKMIGLKDKMYNLYIVEKNLFEPVVNAFMHNGHRYNMLNSAIIELFEFIRQENIKSLIANIVEKFFMFFESIQYVQTFKGLKTKYEEEKKKKRERQLRKSLHNIIYQRIYCRHIKAMEVKVKADIFCRQITDKEEEREKGGGGGEGGGGRGGEGEGGREGGGREGEGGGGGKGGRGEGGAVLSMGSDIPSHYDMFVKINEMNERENVIECRKRKSSATSEYSTSCGDTSDNGISTVYCSSLVPLVDYAYDTDGEDDDGSYGNNENEEEEEEEEEEEPPKKKPYFHP", "length": 840 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AFG0-1", "protein_name": "Cytochrome b5", "gene_name": "ENSRNOG00000064959", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFAKEKGKFEDMAKDVKCYTLGEIQKHQDIKNSWAMLHHRVYDLTKFLEEHLGEEEVLRERAGGHASENFEDVGCSTNVQGLSKVHIIGLFHPALITTIKLNSNWWDQLCSPTSQVVVAHTFNPSTREVGAVGFP", "length": 135 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGM4-1", "protein_name": "Proline rich 18", "gene_name": "Prr18", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLRLLGRVMSFSPMPPPPPPPPPPARTQGGPAARQLSRRPCGPPAASPPAPAAAAAGEKKRRPPEMLLSSSWPSATLKRPPARRGPGLGPGTPQPPTSARVPPQPSPGRGGTSATCSAPRRIACSHIPAGSTASGTSAGAGAGPEDATRFSLSLTPEAILVIQRRHLEKQLLARPRRPFPAPSADPRRPLVPCPRTRSSTLRRGGPTSVPDAPLAVAVSSRPPRASLLPGGLQATMPSPRPSSLRPVLKVSLLNEKHKYDDEEYEEEVEVVDEGLVRKCTEWLRGVESAAAARGRTGHLDSLPHLSTL", "length": 308 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AGS9-1", "protein_name": "Olfactory receptor", "gene_name": "Or5aq7b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVWNSTGVKEFILIGLTENPNWQVPLFLLFCIIYFIILVGNCGMIFLIWLNVQLHTPMYFFLSNLSFCDICYSTIIAPKMIINFLSEHKSTRLFACILQSFFFAVYATTEVVLLSMMAYDRYVAIANPLMYTVIMTQSICTQMILASYLTGLINSLIHTIGLLKLNFCGPNIVNHFFCDVPPLLKLACSDSHINEILLLVFSGIIAISTLIIVIVSYIHIIIAILRIRSAMGRGKAFSTCASHLTAVALFYGSLTFSYIQPSSQYSMEQEKVSAVFYTLVIPMLNPLIYSLRNKDVKEAAQKLMLGKRNAC", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AIA3-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065493", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MIFVPFFPHPGSIRKDGVVYAHTMENSSNSPRETREPAPLRRTWRGCFQRALPRVSKFFRRGRGSTGGWDNGSPRQGPMHSDQDLRHLRSLLSKESCPVMSK", "length": 102 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AK52-1", "protein_name": "Olfactory receptor", "gene_name": "Or9s14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAIEVHRNGSLSAMSLQGFVLLGFRGGAETQALLFTVFLVLYVVTVLGNLTMIMVITLDARLHSPMYFFLKNLSFVDLCLSTVVVPNALASIFFSSKTISFAGCATQFFFFSLLAATEAVLLAVMAYDRFMAICSPLRYPVTMCPMTCVRLVLGTFCVACLNSIVQTSLTFRLPFCSSNRIDHFYCDVPPLLQLACASTALNELVMFGICGFIIVCAVFVVIISYVYITVTILRMHSGSGRHKLFSTCGSHMTAVSLFYGTGFAVYGQPGGVASMEQGKVVSIIYILIIPMLNPLIYSLRNKDVKDALRRLGQRHSLAKESG", "length": 322 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMC4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "ENSRNOG00000068014", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCVFKNAWGHRNMCSMALCSQFGTHLHVSLTDAHSLSCNLIIRSPTKAEPLRYEGHCSMDEIVFLSFNNVNKTMPLGNQEKMANATKVQKCLTQWIDLLGQDLRDKVSEIKVHTTKTSGHPTLRVTMLSKHRHGEIIGASWEFNISENYSFILDLKTMKWKPQDIMKEWKDDETLMKHLNLSIVECSQKFNEFLNQHEERTSRYYLDSALPPAPPPLFKGFTILLWHSYTPAISPTSSDTHSSFINFRDGLIDINFPL", "length": 258 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMN7-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "ENSRNOG00000070681", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPGYITLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLACAEKKAAGKGDVSTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVLYCIIKGKARLGRLVHRKTCTTVVFTQVNSEDKGALAKLVGAIRTNYNDRYNEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AMX9-1", "protein_name": "Ribosomal biogenesis factor", "gene_name": "Rbis", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKNKLKGQKSRNVFHIASHKPLKAKNKAKPVTTNLKKINIMNHEKVNRMNRAFVNIQKELANFSKSLSLKSVQKELHHEKEPANVDEATRLMAQL", "length": 96 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ARJ3-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "Or8b101l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTLGNVSSVKEFILLGLTQQPELQLPLFFLFLGIYVVSVVGNLGLIVLIVLNPHLHTPMYYFLFNLSFTDLCYSTVITPRMLVGFVKQNIISHAECMTQLFSFCFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQICLLMTVGVYMMGFVGAMAHTGSMLSLTFCEGNIINHYMCDIPPLQKLSCTSTSINELVVFTVVGVNVIIPTLTLFVSYTLILSNILSIHSAEGRSKAFSTCGSYIIAVSIFFGAVLFMYFKPSSASVDGDKVSTIFYTILGPMLNPFIYSIRNKDVHVALRRTLKKRIFT", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6ATM0-1", "protein_name": "ELAV-like protein", "gene_name": "Elavl3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKDAGAGSCRYKGLGAAAVRPRARSAQRGPVGGREGGREERTHYPAPDRPDRGPAAEGRAAEISVGKSDFCGPRGAALRAPSTARPLPPSTCRQGSGRRSAHPQARVSSRPSRAPPPPSSPLRRPQSQTPGRDPGVSTRRPPRSARPPEPPSIRTAPAGHTRMVTQILGAMESQVGGGPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKRFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSKQHKA", "length": 522 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AUS4-1", "protein_name": "Ubiquinol-cytochrome-c reductase complex assembly factor 3", "gene_name": "ENSRNOG00000062467", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTAAGKTLAVVAVLGAGAGVGSILFALVTPGELQKQSMLQEMPERDSRRRNEAVRTKELVIATLKDAAATKGNVAWRRTGQLEGQGRMCGTKGTNKCSLPIKWISQLDI", "length": 110 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6AWY6-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000065059", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKATKKSKNTTSDVEPSTSSAKSKKAKTCYQYQTRAGEKKSRWSGSDCSVNVQKTTKKAKRTLPRIAENNTSEKTVPPTKKTKRAKDEQLFGHYHRLMDEISTSTERGPEQSSTDSSSASTSDEESQ", "length": 128 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B5G4-1", "protein_name": "protein-tyrosine-phosphatase", "gene_name": "Ptp4a1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARMNCPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCKATHDTTLVEKESIHVLEWHFDDGAPPSNQIVDDWLSLVKIKFPEEPGCRIAVRCVAGLGRAPGLVALALIEGGMNYEDAVQFIRQKRRGAFNGQQRLPLEKYHPKMWLRFKDSNSHRNNCCIQ", "length": 173 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6B646-1", "protein_name": "Ankyrin repeat domain 66", "gene_name": "Ankrd66", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSREARLHHQTPGDQEAGAACLLSWGGGGASFHGVNTLTLRPAMMACSTELLKDTDSVMELSKLSDMTKLHQAVAAGDYNSVKKILKKGLCDPNYKDVDWNDRTPLHWAAIRGQMEVIHLLIQYGARPCLVTDVGWTAAHFAAESGHLNVLKTLHALHAAIDAADFFGDTPKRIAQIYGQKDCVDFLDTAEPECRDHRQRGLLFDERDPDWDLKKRELELSLPVPDQNTNKKKKRIRGSTRVNHSKAWRI", "length": 251 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G1V0-1", "protein_name": "Ankyrin repeat domain 62 like", "gene_name": "Ankrd62l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRVAGLSSKKSRWLLQSLLDQQRHSLGTGFESANILLSPKYHLKDKDLRKIHKAARDGDAARVQQLLLGKHCVNDKDKKKRTALHIACAYGHPKVVMALVEGKCEVNATDSEECTSLVKAVQCQEEECATILLENNADPNIVDAQGNSALHYAVYYKNTSLAAKLLDHEVNIEATNKDGFTPFLLAVSENKLKIAKFLLMKNASIHAADNQKRTALMHAVSHDSTNLVRFVLEQGVDLFVKDAFGLTAIDYAADFKYNSNMEILLEYKAKRYEESERANLVEKSSEEDSSRRKDQQSQELENMEKEELTEPGNGTEEQEPDGGVTSVEEPRRLDDRGDDQPQEAVTAPRTREKEQELPFTDMCTVVTGKEDEDESSWDSESVSENLPLIRIGVDGLLLVNGQAVENPEKYLHWLHNRKGEESVPNETKGVGDLQAFTPAEPGLELTSEEKHEELSRNEDCQPQVEEERTQEWSGWGAPEALCAAALDHGDIGSPLTRENGHPRARQSPSVDSEEQDGGSGLNIKEEKTRDHEEWSGDFLMDRTSKESEPAAGDLLQVKDSWSLNDTDPNKGSPAKRKSKEKHKVRGEMNAMEDADDFTPLSESCSDNKAELCCNTHQAETETESCELLTRQTGNMEGGVAGEVLKTEPARSREALKETEETGEGARVKMQLPGKDELYSEDAERQQYDMALSALHLKTKQTVRQLQETQDRQREVVRSSQRMQDHLQKLQAGCSEAEAMVQEQGKKTAELQKLHAGMIHELKEKWETIASKYLPLNIQLKYLEQELLSIKIAQKQYEKLHEDQRTLQRDAVDLQHQVQENMAKLDDEKQAMALRDSNNDSLMSQVELRIKNLESNLQKLQAEKESNERNVEKYLQRYIRERELSKTLSHTLHRTNSKLSRVRTDILLVTERNRTVQNTLTTRPVPKSPGVTEHSAYVNRNPNFIASRNLEAAMSSPQPSPELMRRRLLKKQKNMVKNITEEVDKAAAELESWSLEAYPSGSK", "length": 1003 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G430-1", "protein_name": "Large ribosomal subunit protein eL24", "gene_name": "LOC689816", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLETCRNLSAIGYIWEDNSTEEYCKSSRRHGRPTSVTMKVNLCSFSGYKIYSGHERLYARTDGKFSSFLMPNVSPHSFPKGTLGKLTGLSSTEENTRKDSRKKFKRKEPTLQKFQRAITGASLADIMAKRNQKPEVRKAQQEQAIRDAKEAKKAKQASKKTAMAAAKAPTKAAPKQKIVKPVKVSAPRVGGKR", "length": 193 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6G808-1", "protein_name": "Paired immunoglobulin-like type 2 receptor beta", "gene_name": "Pilrb2l7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MARILLLLLSAACLHTGNSAGYPKKYDYGVDQPAVLSGVQSGSIEIPFSFYFPWELAKDPQMRIAWRWKVFHGEFIYNSTQPFIHEHFKGRLIMNWTQGQTSGVLRILNLKENDQATYFSRVFLRTTEGMKSWQSIPGTQLIIHALITTPGSPSIIPSAVPTTGLEDTRGQRTPSLLNLGAMVGMVVSKVVVIIPLYGWVIFLWWKQRTQFRRDLVSEHPWKNFVPILPAESSSFL", "length": 236 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GB91-1", "protein_name": "Olfactory receptor", "gene_name": "Or4c117b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TNRYYFNIFMIIMQNQSFVTEFILLGLSQNPNVENILCVVFLFIYLATIGGNMIIVVTIIYSPALLGSPMYFFLIFLSLLDACTSSTVTPKMIVDFFYERKTISFECCMTQLFAIHFFTGIEVIILSAMAYDRYVAICKPLHYSSIMTQRLCGILVIVSWAGGFLHSIIQIIFTLQLPFCGPNVIDHYLCDLFPLLKLACTEPHIFVILVFSNSGSISIIIFSILLVSYGIILFSLRAHSSEGRRKALSTCGSHITVVLLFFVPCFLIYARPTSAFSSEKNAFVFATIITPLLNPMVYTFRNKEMKNAIRKMWKRLIMVSCNY", "length": 323 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GF85-1", "protein_name": "Ceramide-1-phosphate transfer protein", "gene_name": "ENSRNOG00000064148", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "HFFLEYLNNLKIMLIFLSPPTGGWASDHHSPTTGTHLRFLNSLGAAFSFISKEVVSKLQIMEHPRSSPQSEHCSSLQSMAAYEVSNKLLDLARRSGPLHSNSGCRTVLCLHRALHWLQLFLEGLRTSSEDARTSTLCTEAYSAMLCAYHSWIRQAVTVAFCALPSGKVFLEMLGEALPFMEQMCDISQFYVEHFLLDLP", "length": 199 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GFV7-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f21c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLTMYLATVLGNLLIILAISTDARLHTPMYFFIMILSFTDVCFSSTTVPKVLANYMLRSQTISFSGCLTHLYFLCVFADMDNFLLAVMAYDRFVAICHPLHYTTKMTNKFCVLLIVGSWVLTNLNALLHTLLMAQLSFCGDNIIPHFFCDATPLLKLSCSDTHLNDLMILTEGTMIVVTPFFCILISYIHITCAVLRVSSPRGGWKAFSTCVSHLAVVCLFYGTIISLYFNPSSSHFAGKDMAGAIMYTVVTPMLNPFIYSLRNRNMKGVLRKVLILRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GGC1-1", "protein_name": "Histocompatibility 60b like 1", "gene_name": "H60bl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAKGATSKCNHSLTLSLLVLLNSLGTMQVDGTDSLSCNFTVQYKVSLGQCSVNGMTVLCFDDVRQNSPVCKTEKKGNATKLCNDLNQCLSYSFYEMMKLESGLFESKGNHTLRVTVQSQYNQGEFMDGCWAFMIDRQYPFYFYPKNMTWRENQPNAIKTMSQWENNRELFQSLKFLSTGDFSLCLKKLLTDSRELTRSTIKAPDTTQPTSTTQSPSTGNSTPAMSSNQSPSTGNSTQPTSTTDYLIVFEFTAIFLALIVVSMEKKKVLPAAPLPLQYELQSPSPAVLEES", "length": 290 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GIM2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x11c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADLFNVTEFIFLGLSPNKEVQRVCFVLFLLLYMAIVLGNLLMVVTVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLILDLLAEMKSISVWGCMTQLFFLHYFGGIEIFLLTVMAYDRYVAICKPLHYTSIMNRKVCIVLVGTAWTGGFVHSFAQIVLIFPLPFCGPNTIDHYFCDVLPLLKLACSDTFLIGLLIVANAGTLSVIIFVVLLASYVVILFHLRTLSAEGRRKALSTCGSHVTVVILFFGPCVFIYSRRSDTLPVDKMIAVFYTVITPLLNPLIYSLRSAEVKKAMKNLWFRTMKADEK", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJN1-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein A1", "gene_name": "Hnrnpa1-ps20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "LSQSPPRNRTEQLWKLFIDGLSFETTDESLRSHFERWGTLTDCVVMRDPNTKRPRGFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGSIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGQKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRNGSGNFGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGSRSSGSYGGGGQYFANPRNQGGYGGSSSSSSYGSGRRF", "length": 319 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GJR0-1", "protein_name": "Aspartate aminotransferase", "gene_name": "Got2-ps6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLHSRMATTFHPGLAAAASARASSWWTHVEMGPPDPILGVAEAFKRDTNSKKMNLGVCAYRDDNGKPYMIPSIRRQRPRLLEKIWTKNAYPSGDWLVFVRLLQRSEPVFCKDILSLAKMSFYPNHPGETTRPSSGMPACSYKVIDTMTHKTCGFDFSGALEDISRIPEQSVLLLHACAHNPMGVDPRPEKWKEMVSVVKKKSLFAFFDMAYQGFASGDGDKDAWAVQHFIEQGINVCLCQSYAKNMGLYGERVGSFTVVCKDEEEAKRVESQLKILIRPLYSSPPLNGARIAATILTSPDLRKQWLQEVKGMADRIISKRTQLISNLKKEGLFHNWQHITDQIGMFFYMIKDGRISVAGVTSGNVCYLTHAIHQVTK", "length": 379 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GL73-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC134481331", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "TALLVSLPEQNLAMARILLLFLSAACLHTGNSSGYRRVNDFGVNQPAVLSGVQSGSIEIPFSFYFPWELANDRSMSIAWIWKYFHGEVIYNSTQPFLHEHFKGRLIMNWTQGQTSGVLRILNLKENDQARYFSRVFLRTTEGMKSWQSIPGTQLIIHALNTTMGSPSIIPSAVPTAGLEDKRGQRNPSLLNLGVMVGMVLAKVVVIIPLYGWMIFLWWKQR", "length": 221 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GLF3-1", "protein_name": "Heat shock protein 90 alpha family class B member 1, pseudogene 13", "gene_name": "Hsp90ab1-ps13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEEVHHGEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLWELISNASDALDKIRYESQTDPSKLDSGKELKIDIIPNPQERMLTLVDTGIGMTKADLINNLGTIAKSEDQTEYLEERRVKEVVEKHLQFIGYPITLYLEKEREKEISADEAEEEKREKEEEDKEDEEKPKIEDVGSDEEDESSKDKKKKTKTIKEKSIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNAWEDHLAMTSLSGYVSRMKETQKPIYYISGESKEQVANSAFVERVWKRGFEVVNMTEPIDDYCVQQLKEFNGKSLVSVTKEGLELPEDEEEKKKMEESQTKFENLCKLMKEILDKKVEKVTIPSRLVSSPCCIVTSTCGWTANMERIMKARALRDNSTMEYVMAKKHLDINPDHPMVETLRQKAEADTNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNCIYCMIKLGLGIDEDEVTAEELSAAVREEIPPWRVMRMPLAWKKWIKGSWEAPALCIVSLGLPQQP", "length": 518 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8I6GM54-1", "protein_name": "MAGE domain-containing protein", "gene_name": "Mageb11l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSAKSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDLIERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEVREVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKILKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETSKMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPTASTTPVDT", "length": 342 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8J8YII4-1", "protein_name": "Coiled-coil domain containing 188", "gene_name": "Ccdc188", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEGPEPLGPCGHSHTQHPPAPVSNNHGGCLNQPCQGFVRWPCLVPLQSTQSLESSRPFPAPGTGSGGPRMRGEAPGMFLSSEGEIPRQRAREPAGARQEEVEVEWDWPLHPGHEQGPPRQTAPPTSGPRPCPCPTLPPRGRATASSRQAPTQLQGGTLESAQQSFLQLEQENHSLKRQNQDLREQLGALLGPGQQFLPLCSEHSSCTALAWVSGNTRSRTHAAAPPAVHSLGPDPGALPQSPESARTRLLEDRAPVQLLRQQELCPGKESFVRQSQSELQQIRLSFERKKMAITEVWDGVAEVHMALNNQATGLLNLKKDIRGVLEQMEDIQLEILGERAQCRTQARKQQQMMEAAGLEAAAGCSAGLHSGLRVRGGPHTLRGAGATPAEPSQRLEAQGLTGSLLTPGGGRLPAFLEQKPSGPSKEARWLVLPQGLRGLTGPCLQHCGTWPLPEAAEKGGGRASPEGWACSWIYSHDTLCM", "length": 481 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M9PVG7-1", "protein_name": "5-hydroxytryptamine receptor 7", "gene_name": "htr7a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLGDTNRTIIAKSHGETMKSLMAEERARETGASVETFNGIMISEVLVPRLFKIAHESGEVAVAAGSGSMDMKPSSSPILLEMMEVANGTRCAEQILSYGEVEKVLIGGVLTMLTLITICGNMLVVISVCFVKKLRQPSNYLIVSLALADLSVALAVMPFVSITDLIGGRWIFGKFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGWCMAKMVLSVWLLSASITLPPLFGWAQNVNDDRVCLISQDFGYTIYSTAVAFYIPMTVMLVMYYRIFRAAKLSAAKHTITGFPRVEQEEVEEDEVEEDGGDGAEEPTGVDCVTVAIKLQREVEECARLPRILRGVGRRCSDRRSISIFKREQKAAATLGIVVGAFTICWLPFFLLSTARPFICGTECSCIPLWVERTLLWLGYANSLINPFIYAFFNRDLRTTYRSLLSCRYRNINRRLSAAGMHEALRLVERPEVVVSG", "length": 479 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8M9QGZ8-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr118", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLFTVLGVIALFLRERDTNNTEEEVQNDVPPVRNSDGQEIDDWCKEPSLLEPVSVHSEEPSLEEPVSAHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLKEPVSVHSEEPSLVEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPVSVHSEEPSLEEPSLDLSFFSAESSWSEDLSSSFLTVESSWSDDLSSGFLTAESGCGDDEPLFVDSAEPEKLKEDKETQIIEINSHCYAIEAQLGEGGCGAVFSATRLEDGLQVAVKLSDFEEEKRFISVDGFEDPLPLEIALHFLANKGPKVKEIIELLDWKVEADRYFMVLEQPIPCMSLHEFLLDCEGIIPENKLRTIMYQTTVAAQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGDLLTEDSFQYFRGTREYFPPEFSSTGRYHGEPATVWSLGVVLFLLVFYRFPEQSDLPRMNNRRLRIKGLSRDCCDFFHGCLQLDPKDRLELQNLSSHKWIRTRTRRNDENCPNLTDGSSHSNHPITSN", "length": 567 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0A8V0WZU8-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6B2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMVVNLILGWWLVAVSRAQKLPRPSLSLHPSQGASLGDNVTLRCHLPQPAAWVRLYRYQNPTYIEQKDNVQDMAEFSLTSIKQEDAVIYQCQYQGLAPAGTSQKSDPMELLVTDHRYPPPGISLSPKEHVEMGSNITIQCWNKDYGASFLLHKGGHSAPIQHQEPDYWGTATFTLFGVTPADSGTYRCSYRIGGCCLLFSPLGDNVTLEVIPRPAPPGVNGGPSRNLVAAVAGGCAAAIVIITVSFLLVALRRQMQRAERPGATPRSPEAVQFQVSPGDSEGLTYAQLQAVTPSTHPPTSSTTPEPPIIYAEVGTRGPR", "length": 321 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEA0-1", "protein_name": "C-type lectin like 8, MHCY region", "gene_name": "YLEC8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 276 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XED4-1", "protein_name": "C-type lectin like 18, MHCY region", "gene_name": "YLEC50", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTSSDPQLPEEDVQILLLESNTSTPAMGEGDQQETFSEHQAAPEPLGQSGGHQWGSWCHGMGRRRSCVQLIAVHAALGALILMLVVLVISTVCRRAPIPPFSAFGHACPNAWVGFQGKCYYLSKEENDWNSSREHCSAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKAHPQ", "length": 276 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XEJ6-1", "protein_name": "Sulfotransferase", "gene_name": "LOC769841", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVCRAAAPNSHPSTMPVHYVTYKGIKFPPAYNSVHSLSFAHNEFLVRDDDVFNITYPKSGTVWMTEILSLIRSHGHPSWNQTVLNSDRMPWFSTRLGLEAALSYPSPRLLTCHLPRHIFPKSFSHSTAKVIYTLRDPRDVVVSYFYFCKMCNSYEDPVSFEQFLRDFLSGELPHGSWFEHVRGWMQMKDRENFFFITYEELKQDLQGSVRRLCHFLGQNLDDDAISSVVQNASFMAMRQNPMCSSILLPADIMDQTKGQFLRKGICGDWKNHFTVAQTETFNRIYLEKMRGLNVAFPWDRDQDPDLTEQ", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGU1-1", "protein_name": "C-type lectin domain-containing protein", "gene_name": "YLEC62", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQSVQIPILKHKVSTPAEGERLNHFSEHKAAPEPTAHQRRRIPTGSDPQLPEEDVHISVLESNTSTPAMGEGDQQETFLEHKAVTEPLGQSGEKPQWGSRCHGTGRRRSRVQLIAVHAAVGALILMLVVLVISTVCRRASIPPFSAFGHACPNAWVGFQGKCYYFSKEENDWNSSREHCNAHGASLATIGSAEEMDFMMRFQGPANCWIGLHREEEDAQWTWSDGTAFTNWFELRGGGRCAYLNGDRISSSLCHLHKHWVCSRADHYVLWKQKVHPQ", "length": 277 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XGW1-1", "protein_name": "NHL repeat-containing protein 3", "gene_name": "NHLRC3", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAPAVLWRLQRLSAAERLEARLSGAVRKEPGRGEARQSEKKPHSPHCPLRCSYACPGRTPMTSESGRKALSHLGRQQQCLNKMAELRARLEAFPAPECLFKTLNPFMGFLRLFFAPQPLGGEQALFRAAQCAEASPRIPAPQAWAGRSRGCHGNAARPASMGRKQAVGPRLVMAGALLTLLGLLWGSQMLKAFDYFSSWKGDGEQQMYKLDISWPKIPEYFSGQTFCVAVDSLHGLVYVGQRGDDIPKVLVFSVEGYFLYSWNDTVEMPHGIFVLNTATDSSVWITDVGSGKYGHTVKQYSPSGKLLQVLGTPGNAGSSLNPLQFDQPAEIFVEESGEMYIVDGDGGMNNRLLKLSQDYKEIWLSGENGTGIGQFKIPHSVTVDPFGRVWVADRDNRRIQVFDKVTGEWLGAWSSCFLEDGPYSVRFTGNYKYLIVAHLNINRLAILAAPPVGEIGDCAIVSTIQLADETKPHLVDVDVKSGAIYIAEIGAQQVQRFVPLS", "length": 502 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPN1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR2A13", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPMAVALILGWWLVAASRAQQLPRPSLSLHPSQGVSLGDNVTLRCHLPRPAAWVWLYLEGRWSYAKYIDKKQDTTEFSFLSASHDQAGTYLCQYQVSESEDVSVTSDPVKLVLTDRSFPPPHISLHPEERVGTGTNVTICCWNKDYGATFLLHKDGRSDPIQRLVPDDVGAVSFTLFGVTPADSGTYRCSYHPKNYPFLSSPLGDSVTLEVTPTPAPPGAELVSRGNLVVAVVRGCAAALIFGLGVFFVIDARSLWIRRDESLGGEGI", "length": 269 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XPP6-1", "protein_name": "SUN domain-containing protein", "gene_name": "LOC776146", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQQGHGERGNWQTKVWKTVALVLVTVAVASFGVYCVGGLVEGIKTTAGVTARLVRRDGEIVSLDEELAKVQRQLHVLQWRARDITERALHEALRRTELPGFTGEAVQKIIHQVLEKLEESPFQMTNYASKTSGAAIVRSKTSPSWIGSGRVFWQSLPLVAYMRPPEVILEPDNHPGNCWPFPGSQGHVFIKLPVAVFPTAVTINHGVPAAAYHADSISSAPKDFAVYGLQEEDDETGTLLGEFIFMPGQAPGQTFQLKNEHSAFIKYVRLQVLSNWGHPEYTCVYQFRLHGDPAPDGDARGKLSA", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XQE0-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "CHIR6A8", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPMAVNLILGWWLVAGSRAQQLPRPSLSLHPSRGVSLGNLVTLRCHLPRLAAWVWLYRGGGWSYKKGKKKEQDAAEFSFASTLREHAGRYRCQYRVYESAEVSVESDPVELVLTDVRYPPSSISLQPEQHVGTGTSVTIHCWNKDYGATFFLHKDGSSDPLQRQDSSGGGTATFTLFGVTPADSGTYRCSYRHWRYAFMSSPLGDSVMLEVTPTPAPPGAELVSRGNLVVAVVRGCAAVLIFALGVFFVIDARSLWIGRDESLGGKGI", "length": 269 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0XTD2-1", "protein_name": "Coiled-coil domain containing 97", "gene_name": "CCDC97", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKEDPKEAEGPTASKWIPIASNGNPTASKWIPIASNGDPTAPKWVPISSNGDPNWVPISSNRDPMASKWIPVSSDRDPTVTKENPPSSNETPAAEWDPKVPPEGRPVEEGDPKASPTEDPPAEPDPKASNCAPLSSHWAPEAAVWDPTSPHRDPTAEPQCSASPEQHRAAQRDPASPMEEDRYPATHGVRPATRADPAPYGDHPEAEEDPLPAAVEAMLAAVAASPVRVRSQQQGDPELTAAERRRDLRALFLRKPLVFLERFHGALQAEHLPCFAHLPPRYEVAFYCRQVRARRQQNPQTGLSRWPRRPGARTRLRNRRYAALRQLIAGGEYFSEEEMRAREPLLYEHYIGQYRDAETPPGTPPCPPHPGTPPGTTWAAALLRSVEEAAVQQRLQRQRLREGDSGEEDEDEDEAEEPHIPDAGELEVLREEFRSRMYQRFLDGEDRDFDYSQVDENPDMDNLDIESRDAEERYFDEEEPSAAPQLE", "length": 487 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Y889-1", "protein_name": "Transmembrane protein 65", "gene_name": "TMEM65", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWLGRAVLLLGRPGGPAAPSSSSRLCSLRGPPRCCCRRRLSSLRGGADGLLPARGAPPGRALGTHPKKEPMEALNTAQGARDFIYSLHSTERSCLLRELHRFESIAIAQDPIAARASCQQYGETWAHQEPSGACSSVHSQAYHQKEAVPSSNCPSTKYDRTHYLWPPLMAEAAGKPGRCPHCCAEGWSSEKLEVAPPSPGQLRHVFFHNALPFVGFGFLDNAIMIAAGTQIELSIGVVLGISTMAAAALGNLVSDLAGLGLAGYVEALASRLGLSIPDLTPKQADMWQTRLSAHLGKAIGVTVGCILGMFPLLFFGDEEEKLEEKN", "length": 328 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YA34-1", "protein_name": "SWIM-type domain-containing protein", "gene_name": "LOC100859602", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAERGQLPPYAKRLCCRPGYGSGCRLGQQAGDTGPGSGTFCAGPSSAAAAAAAAAAATAASLVLLPLGKTQSPESLLDIAARKVAEKWPFQRVEEQFERIPEPVQRRIVYWSFPRSEREICMYSSFDTGAEGFTAPGSAAGNTASGGAVDAVADENRLPFRRGMALLDGGCVDNVLQVGFHLSGTVTEPAMQSEPETVFNVAISFDRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQYLITVHHTEVLPTAQKLADEILSQNSEISQVHGAPDPTAGASIDDENCWHLDEEQVQEQVKLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITDQFMADPRLLLWRQQGTAMTDKYRQLWDELGALWMCIVLNPHCKLEQKTSWLKQLKKWNCVDVCPWEDGNHGNELPNLTNALPQGANANQDSSNRPHRTVFTRAIEACDLHWQDSHLLHIISSDLYTNYCYHDDTESSLFDSHGWPLWHEHVPTACARVDALRSHGYSREALRLAIAIVNTLRRQQQKQLEMFQARKKELLYRGITSITNLEGWVGHPLDPIGTLFSSLMEACRVDDDNFHGFSDFMENTSQHKSLEYQHLPAHKFLEEGESYLMLAVEVALIGLGQQRIMPDGLYAQEKVCRNEEQLISKLQEIELDDTLVKIFRKQAVFLLEAGPYSGLGEVIHRESVPMHTFAKYLFTSLLPHDAELAYKITLRAMRLLVLESTAPSGDMSHPHHIASIVPNRYPRWFNLSHIESQQCELASTMLSAAKGDVQRLETVLQSIQKNIHSSSHIFKLAQDAFKIATLTDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREMVRWLVTCATELGVHALDSIMQNWFTLFTPTEATSIVATTVMSNSTIVRLHLDCLQQEKLAGSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYSQLFTIARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVKSVKCATVLSDILRRCTLTTPGMVGLQGRRNSVKLMSLDKAPLRQLLDATIGAYINTTHSRLTHISPRHYGEFIEFLSKARETFLMSHDGQIQFTQFINNLKQIYKGKKKLMMLVRERFG", "length": 1168 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0YDY5-1", "protein_name": "SKA complex subunit 1", "gene_name": "SKA1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEAEGLEALSRHLAAKIGLIKRLLQLRGLGRREMLAEVGMEVAVLHGLLGRMEEEVNQRRQLAAALQEMRKRAEKEKWEAERLQLVKKAAKEAPLVNDAPLISDEEFESVPGYMRGRLTLAQTNAALRALHAAAASKYRLLRHPPKSLPSSSRALCHRFREEETKETQGLTFVVEADLKEFTQLKVDRTFHRIVGVLRHCRRLREVRGARLVRYVLP", "length": 217 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0Z0M2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 10", "gene_name": "TNFSF10", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MLPAGGPSPAHTCGAVLVAAVLLQSVCVAVTYIYFTNELKQFANADLVHSCERGHPLSPPPPPDVPQTAVTRPTKAEGGAAPVGASCSIGQSRRAQSDLRQRAANAASPQHGPPCAARSRARCSCPRCTAGPRVCRRTQQKLWDTYSRSGTACLTGEELGDLIQNLDVVESKDRVADPCWQVKWHLGKLIKKMMSRILQENMSAINGDRTQALPRRDEPPQGPTLRIAAHLTGSSKRSSASPHIDYLSYRGIGHKIHSWESSRRGHSFLYNVELWNGELVVPQTGFYYIYSQTYFRFRENEDEDSGLLERIKNPKQLVQYIYKLTNYPDPILLMKSARTSCWSKKAEYGLYSIYQGGVFQLKREDRIFVSVSNSDIVDMDKEASFFGAFMIS", "length": 392 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZCD9-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418390", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMSALLFTLLHYWKIWFCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEREEQQEQVEEEEQLERVEELEQEDQVEHVEQEEQEEREDQGEQVQQEEQVEEVEQEDEEEEYFHHSALTRYIARRAWEKMQGKATKCVLVEELMSDLLQTYTFVCSNSFYPVLQPAIGVGSAFEGWSPCEEDIVYRLLVPIKAPHGHVFHPELGEEGEVLARNSRIRVELVCMCTREQQLGDVLCFLHHSEEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRTWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAVFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKVLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRVLRDFKELKDRLFRLLLFGR", "length": 542 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZD85-1", "protein_name": "Mab-21-like HhH/H2TH-like domain-containing protein", "gene_name": "LOC124418382", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MALVLVLALLVRALIVSGSDHAVMLERVQQHEKEQRNGEQSWVDMPALLFTLLHYWKIWLCTGLFVFLFWNMWRSLKRKQHEEGGQQEQQEREEQVEEVEPEEQQEQVEQEEQLERVEELERVDQVEHVEQEEREDQGEQVQQEEQVEEVEREDEEDEYFYHSALTRYIARRAWEKMQGRATKCVLVEELMRDLLQTFTFVCPNSFYPVLQPAIGVGSAFEGWSPCEEDIVYHLLVPIKAPHGHVFHPELGEEGDMLARNSRIRVELVCMCTREQQLGDVLCFLHHSQEELSQNQQPSLLQTLCTGSYLDVQKTAAWFNKQVPRIWRLTHRAHRYGLKVLPSSRSCKLQVTDTSSGEKVHVELLFGVQQGNLDIFLSSQNAEAIFTPSTTWPQSCAVAERKYFEYVARTAGPNSCHLVCLRLFAHILVGMGFSTYAIKTLLLHLLAIIPLEDWRRRHFLSRLENLLQYLQYCLNDKLLNHFLLGNATMPDEVVLPQAFQTASPLNLFQHLEQDPDAHSRALRDFKELKDRLFRLLLFGR", "length": 539 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZE07-1", "protein_name": "LIM domain only 1", "gene_name": "LIMO1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVLDKEDGVPMLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRDSNPMGWYGSHPVTAAWEAEARTTSLGQPGVRAAELP", "length": 158 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZGC1-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC124416945", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVAGSPALLLLLSLGLCFTGAQGQGNTMAVSFLNRSMKHPKEGQRLGLECHTYKTSWGVSWIRLDKDGNLHFIVYISKFSSTTFPGNKGASSQFEVSKQGSSYRLTVKNFRAQDQGIYFCIANINQVLHFSSGQRAFFPVTTTTAAPTTLRAVTLTATTQSSQVTMKDISQHSPDPGRSKENMPNFCCKLVMWVNLACACLLLLTAITITTTHCQRPSSP", "length": 220 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V0ZPB4-1", "protein_name": "trypsin", "gene_name": "LOC107049069", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MKFLVLVAFVGVAVAFPIRDEDDDKIVGGYSCARSAAPYQVSLNSGCHFCGGSLISSQWVLSAAHCYKSSIQVKLGEYNLAAQDGSEQTISSSKVIRHSGYNANTLNNDTMLIKLSKAATLNSYVNTVPLPTSCVTAGTTCLISGWGNTLSSGSLYPDVLQCLNAPVLSSSQCSSAYPGRITSNMICIGYLNGGKDSCQGDSGGPVVCNGQLQGIVSWGFGCAQKGYPGVYTKVCNYVSWIKTTMSSN", "length": 248 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A1Z3-1", "protein_name": "Bridging integrator 2", "gene_name": "BIN2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPSLYHPNAIPVPFPSHPCTTLMSSLTHHIIPVPSSCLPNVIPIPYHPHVISTLSLLHPHFIPMAFLNLPHAIPVPPLIHSCAVPMSYHPFPISFSFPSPSHPSIAPMQSPSYPYPTPVPPPFHLLPIPIPTPVPPPCHSCSIPIQPRCRLHAILVPFPPHCHPHPVPAPSPPHPSAIPMPSHFHPHPIPVPPHTISIPSPPQCHLHAIPVPSPTHPHPIPSHPRFPHPLWAQGHPHPRGSNLSPPIPPPPPNTFALQNEGNKLYKDLKAFVGAVKVMHESSRKVAETLQEIYSTEWDGHVELKAIADSNDLLWDDYEAKLGDQALRLMENYLAQFGDIKERIAKRGRKLVDYDSARHHLEALQNAKKKDEAKIAKAEEEFNRAQAVFEELNRELREELPVLYGSRIACYVTIFQNISNLRDIFYKEMSKLNRDLYEVMGKLDKQHSSKVFIIKGVPSKRRSLLISAPVSPPAAYPCPGKAPNWDPSSGAEQTPTSPRVGSDATEDVPNGLAAPGPAEPGAPMPGPPPASPTSVRSASESESECSEESREIDLSPKEMEVSVGSGCPEYPKTEGAAKGEVEGIAASMASMIVSEAIAAATGAAPGDSDGVGGGDSTDSEISPAEGAWGGPSPGGSEERVEGTDVSPEVGSDAGPCEHGTPEPPQQDVSCDPPQDPSESLTPL", "length": 682 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1A7J1-1", "protein_name": "Mitochondrial transcription termination factor 4", "gene_name": "MTERF4", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAGRLLGLLRARAPRAVLPAPGPASRHRCGTAGPEEGEAAELLAMGFSQAQARRLRLLRPGLEPQRRAEAAAQLLLLGLSAEAALGLLERSPGLLRMETARLKERAEYLRRLGLEGERGGPLPRGVHAAPAEDGGGGAAAAGAVSVHGRAADRAAAELPRGAAGGAGPRAAPLPGAGRRAGRSGGVAGAARPALSSARLHAQYAYFRMGVRQKEMVKARLFRTPFAELRNRHVFLERRGLYRTPHKGQSQSGNPALRDVLRPTEGDFVAGVARASPDEYEVFKRLLAREEEEMEEEEEEDEEEEEEEEGSAALHAEGGDRDWHSSEPSPIAPCPPAPQ", "length": 338 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AKD9-1", "protein_name": "Borealin", "gene_name": "LOC121107214", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAPARRKAAAGARGRKLSAFLKDFDREVRSRVEQLRTNGERLVKEMENLYDVELLRLPAALREMNWLEFFAKGGSQKVVEEAVTADLGITEINKLTAELIQTPLKIVTKEKSKQGIEATEEAAEVPLLPPAKKAKHDSQLLLEQAAASTNPRNGKVRTSTKKAPVSRSRRAPSARVKRVSKRSSKSSFITPATGRNLDLCARGGASIVTPRFDSRVFKTPGLRTPAVNERVYTISANGSPLADGNDVFITVPVGGGESIRLTASDLTKKNLLHLNPEARGIMKKLSVRLAQACSSAKTHR", "length": 300 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8V1AMC7-1", "protein_name": "ODF3A protein", "gene_name": "LOC121107218", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPASMDGAWVGTWRPHRPRGLISAQFPSPGPQYSIPGTTGYVGHSPTKARAPAYTFRGTKPPAAGSCGPGPCYFVEPAITRNGKYVAPGAQLRGRPVTKTTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDHPPGPGTYTLPRLMGPNTVYTSASPCYSVRGRSQRGRFDEDLAKTPGPAALPKVPVDAYKTRAPAYTMAARPKAGEGKAAKPGPADYSVGRVTLIKPQAPASTFGIRHSLYTTPLIVE", "length": 255 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A8W4F7J1-1", "protein_name": "40S ribosomal protein S26", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQPIHCTNCARCMPKDKAIEKFIIRNIVEAAAVGVISEVSVFAAYVLPKLYAKRHYCESCAIHSKVIRNRSREAQKVRTPPPRFRPTGAALRPPPKCM", "length": 98 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F8K9-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258234", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTVTTFILLGLTDEPQLKTLVFIFLFLTYMLSVTGNIISLTSTDSHLKTAMYFFLQNFSFLEIAFTSACIPKYLYNIATGDKTITYNSCATQLFFTDLFAVTEFFLLATMSYDRYVAICKPLHYVTIVNHTVCRRLIFGSWLAGLLIIIPPLSLGLKLEFCDSNVIDHFVCDAAPLLKISCSETWLIEQMVIVCAVLTFIMTLMCVVLSYVHILKTILQFPSAQQRKKAFSTCSSHMIMVSISYGSCIFIYVKPSPKDSLAVNKGVTILTTSIAPMLNPFIYTLRNKQVKQAFNDAIKRIALFSKN", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4F9E2-1", "protein_name": "UPAR/Ly6 domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "RLEFSSLSPAEVPLVAAAGGRGAFDMRCHECDTKNTFACDHIVTCPRGIRRCLTLSIRLSSREIYVYKGCTRNCTFIYADEQPPPGERKPPRSNSLYFVQCCNAITCNRGGPINLEKDITPPLILEEELGGTVRLGEATLFLSVASVLVSHALT", "length": 154 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBC5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MLTHSFSFFSSSSSSSTYSSSYPLLPLLLQPQNQFRIWALKDYGQRNSTSLHDFILLGVVATFYLITLVGNTAIILASLLDSHLHTPMYFFLRNLSFLDLCFTTSIVPQMLLYVYMWLGSIECLLLAVMSYDRFTAICKPLHYLVIMNPHLCLKMIIMVWSISLANSVVLCTLTLNLPRCGNNLLDHFLCELPAMLKIACIDTTAVELSVFALGIAIVLTPLILILISYGYIAKAVLRMKSTAGQRKAINTCGSHLTVVSIFYGAIIYLYLQPGNSASKDQGKFLTLFYTIITPSLNPLIYTLRNKDMKEALKKLMRVDHKSTKSKRTWKS", "length": 331 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FBS2-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258626", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRNHTAITTFILLGLTEDPQLQLLLFLFLFLTYILSVAGNLTIITLTLLDPHLKTPMYFFLQNFSLLEISFTTACIPRFLYSISTGDRTITYNTCFTQLFLTDLFVITEFFLLATMAYDRYVAICKPLHYMTIMSNKLCKTMVVCCWLAALLIILPPFSLCFHLEFCDSNLIDHFACDASPLLKISCSDTWLIEQMVIACAVLTFIITLVGVVLSYIYIIRTILKFPSAQQRKKAFSTCSSHMIVVSITYGSCIFIYINPSAKEEVNLNKSVSLLISPISPVLNPFIYTLRNKQVKQALHDSLKKTAFLLRK", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FCJ2-1", "protein_name": "Histone H2A", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSRKRNLPQCNPPKKQALSRSSRAELQFPVSRVDRYLREGRYAQRLSSHTPVFLAGVLEYLTANILELAAGEAHSSRKMRIAPEHVQRARSHNETLSSLFQASSVSRGAEEEAEEPLPEAGR", "length": 122 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FD42-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFIILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLNCCITQLFFIHSIFVFESGLLLVMAFDRYVAICYPLRYTTILTHPLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLLLDILLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVCIIILFYGPGIFTALTQRFGRHIPAHIHILLANVCILVPPMLNPIIYGIKTKAIQEQVALILFPKYR", "length": 314 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FH98-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "VCHYGNYYSGLSCSCGYGCGYSRCGCNCDYDKCGYRCGYGGYVYGCCHLSCCGRYRPYGFY", "length": 61 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FHY5-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "DTGSCGAIVLTQTPLSLSVSPGEPASISCRSSQSLEEYGKNWLSWYQQKPGQSPRLLIYQATNRASWVPERFSGSGSGTDFTLKISRVEAEDAGVYYCQQYKEFPPTVIQPLTQTPLLGAQLHTWLCVVWGAEGQKL", "length": 137 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FIZ4-1", "protein_name": "Envelope glycoprotein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRPTLSRRHLPTRGGEPKRLRIPLSFASITWFLTLTITPQASSKRLVDSLTSPKPLSLTWLLTDSSTGITINSTQREAPLGTWWPELHVCLRLVIPGLNTMSTPPDILRAYGFYVCPGPPNNEEYCGNPRDFFCKKWSCVTSNDGYWKWPTSRQDRVTFSFVNSYTSYNQFNYGHGRWKDWQRQTQNRQISCSPSDLDYLKISFTEKGKRENIQKWINGMSWGVVYYRGSWGGEGSILTIRLRIETQMEPPVAVGPNKVLTEQGPPIQGQRPSPNPSDFNTTSG", "length": 284 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJ61-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSTKNKHLMKGSKKGPKKKVADPFSKKDWYDGKAPAMLTKKRNIRKTLVTGTQRTKITSDGLKGHVFSSEPCQSAE", "length": 77 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FJT7-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MKNPEVRKIHSAVFLITYLSTILGNLLIVVTMVTSQSLRSPMYFFLTSLSLMYVTYSSVIAPKMIVDSFSETTAISLEGCMAQLFAEHFFGGVGIILIIVMAYDHYVVCCLLLGGAWVGGSIHATIQLLFICQTPFCGPNVIDCFMCDLFTLLKLACMDTHLLGILVILNSGVMCMAIILILITSYVVILCSLKSYSFEGQHKALSTCGSHLIVVVLFFVPCIFLYVMPVATYPIDKAMAVSFTIVAPMLNPLTCTLRNAEVNNAMRKLWMKQNTLCYH", "length": 279 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKQ6-1", "protein_name": "Large ribosomal subunit protein uL5", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVQDQDEKKNPMWELGIHKLCLNICEGESGNRLTRAAEVLKQLTGQSPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEIFERHLRVREYKVQEHISLGTKYDPSIGIYSLDFYVVLGRPGFSFADKKHRTGCIGAKHGISKEDAMSWFQQKYDEIILPGK", "length": 163 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FKY3-1", "protein_name": "Large ribosomal subunit protein eL27", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGKFVKPGKVVLVLAGRYSGRKAVIVKNTDDGTSDQPYSHALVAGIDRYPRKVTAAMGKKKIAKSSKIQSFVKYSVDIPLHKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKCFFQKLRF", "length": 125 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FLM5-1", "protein_name": "Small ribosomal subunit protein uS14", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGHQQLYWSHLRKFGQGSRSCCVCSNWHGLIRKYSLDMCHQRFCQHMKDPGFIRLD", "length": 56 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FNC8-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGQRNQTSSLADFILEGLFDDSPAHAFLFSLTMVVFLIAVSGNTLTILLICADPRLHTPMYVLLTNYLSGTKSISFVGCATQYFLFLSLGCAECILLTFMSYDRYVAICHPLRYAVLMNRKVGQMMAVMSWLGASVNSLIHTVILMHFPFCGHRNIHHFYCEFPAVVQLVCGDITVYEIAVYIGDIVLLLLPIALISASYVFILHSVIRMHSAGGKRNAFATCSSHLTVVSLWFGACIFSYMRPRSQRTPLQDKVGSVFYTIITPTLNPLIYTLRNKDIAKALKRVLGREMITQNPKVRLP", "length": 301 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP10-1", "protein_name": "Ribosomal protein L19", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSVLRLQKRLASSVLRCGKKKVWLDPDETREIANAKSRQQIWKLIKDGLSIQKPGTVHSRARCQKNTLRKGTASAGMPKKSVPERDGNVFKNKRILMEHTHQLKADKARKKLLADQPEARRSKTKEARKRRQERLQAKKEERNRTEVETKFCRLI", "length": 155 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FP36-1", "protein_name": "Small ribosomal subunit protein eS24", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MQDTASIRTRKFRTNQLLPGKQRVIRVLHPGKATVPKTEIWGKLAKMNKRTPDVIFVFGFRTHFGGGKTTGFGMSHDSLDDYTKTNEPKHKRARHGLYEKSKTSRKQRKERKNRMKKVGGTAKANAGAGQKGGV", "length": 134 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A8W4FQE1-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MTALNHTGVSHTVFYLLGIPGLEDQHLWISIPFFISYVTALLGNSLLIFLILTRRSLHEPMFLFLCMLAGADLVLSTCTVPQALAIFWFRAGEISLDRCITQLFFIHSIFIFESGLLLVMAFDRYVAICYPLRYTTILTHTLIGKIGVTIVLRSYCAIFPIIFLLKRLTFCRSNVLPHTGCEHIGLAKYACNDIRVNIWYGLFVIVSTLFLDVLLIFVSYMLILHAVFHMPSQDARHKALNTCGSHVSVIILFYGPGFFTTLTQRFGRHIPAHIHILLANVCVLVPPMLNPIIYGIKTKAIREQVAHLLFPKQK", "length": 314 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "A0A9J7F7T0-1", "protein_name": "Protein transport protein Sec61 subunit gamma", "gene_name": "LOC100757015", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDYVMQFVEPSGQFVKDSIWLVKRCTKLDRKEFQKVAMSTAMVFAIMGFTGFVKLIHIPVNNIIVGG", "length": 67 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GY23-1", "protein_name": "Tetratricopeptide repeat protein 16 isoform X2", "gene_name": "Ttc16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTDSSTEESVNVQTQKIPKLQVPETRETTLQRIFGTSQVFYSVSGVVKPRLTESTVPFRVREYYHQGHHCLEQEDWEMAVLYFSRALHLNPDQVEFYIFRAEAFIQLCDFSSALQNLRRAYSYEPENSKYLERLAFVLYLQGQCLYELCDFQEALYVFLQASDLQPQNPSFSYRCMACLLALNRHQDCLSLVTREVKQGRATADVYILRARIYNFFQKPKLCYQDLRSALLFNPKHPQAKGLLQVMVDQAKKSLQDASILAVQGKLHRALKRISCAIENNPLDPNLFLFRGTLHRRLQQFDPAVEDFLKAMDMVTDSQDNLVQKTQRQLLLTYNDFAVHCYTQGAYQEGVLLLNKAIRDEQNEKGLYINRGDCFFQLGNLAFAEADYKQALELCPKDEGANLRMGVLQEKMGLCEQTRRQFQKAEDHFSAAIKYNPVNAQYYLHRAKNRQLLQNIVGACQDIATVLLLNPKYPKMAPLMAKLFPGMSVEEVLNSHVAQLAKLQLRRMIESGPKASHPQSIVAKRLIERQKAQALMESWNWEQLFTRNPEEEVAPSESLQGKTLREKIEFKREVVEEKKVKILRKVTSLSDSYVDQTSSGSEFSILSPSTLETEVSTMEYKSTSNTAASSAERLLPQYLVTTKYKESLGLSMAPNVTQVSEDLHKSLTENIPDDGPRHHSSKAEATQRPKPRKTEPSQSLGKQRPSQRPSITEATKGPKPRKNRPALSPRQRLRRAKAVQAQNWKPRTNSNSQKTSSLLSNIAVIISSSNEAQDQSPVPSKADDISSYNDSTATSSTNTDSLRLSIHLSKPKYSKDQSPSHNKEEVSPTSNNYAAP", "length": 835 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7GZF8-1", "protein_name": "Protein EURL homolog isoform X2", "gene_name": "C4H21orf91", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MIIKRKATVIHHKGTMNEEEQFVNIDLNDDNICSVCKLGTDKETLSFCHICFELNLEGVPKSNLLHTRSLRGHKDCFEKYHLIANQDCSRSKLSKSTYEGVKTLLTKKINWIVQYAQNKDMDLDSECSKNTRHHLFNFRHKPDKKLLPQFDSQVPKYSVKGIAGSTGGLSSYTQRILEQRENTDFGLAILQDSDALWPHKHNQAQKKEETSSGPENVQTQNPRYSREELNSMTLDEVEQLNTKLQQQIQEVFEELTHQVQEKDSLASELHVRHVAIEQLLKNYSKLPCLQVGRAGPRSHLPINN", "length": 304 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A9J7JMJ4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100771730", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDFVNISLVTEFFLVGLTDQPELQMPLFFLFLAVYLITALGNLCLIILTVLNSNLHTPMYFFLFNLSFIDICYCSVFTPQMLMNFILRENIISYMECMAQVFFFCFFVVSECYVLTSMAYDRYMAIYNPLLYNVVMSPNLCLNLMFGSYFIGFSNAVAHTVCMLRLTFCDTNIINHYFCDIPPLLQLSCTSTYVNKLVIFVFASINIIVPTSTILVSYGFILSSIFHISSSEGRSKAFSTCSSHIIAVSLFFGSGALVYFKPSSAVYMNEGKISSVFYTNVVPMLNPLIYSLRNKDIKVALMKSLNSRNL", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0AA74KSW7-1", "protein_name": "Predicted gene 3002", "gene_name": "Gm3002", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLNSSKLGVWAAGVPPSSPTLLFRRWVMKVESLISQPMTSGKNELQDHLIFISEKALHKRLFQKENGDEGVTRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSPAESRTWHRPGHDLPQREVLEEEH", "length": 280 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A0AAA9RU54-1", "protein_name": "Small integral membrane protein 17", "gene_name": "SMIM17", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MQSLRPEQVRGLLEPERAKTLLPRENKAWEKRAAFAKDWVAVEVGASGCGSDEKDLPSPKTLVPQEWSSVEEDDESEDSQPHWAAALPTSPSCPSQDTGTGSGADLCLQCSSPRTPPWLPWAFSHTIESALPTPPRAWLWSLL", "length": 143 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0AAA9RY85-1", "protein_name": "Core Histone H2A/H2B/H3 domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNMPEPAKSAPAPKKGSKKAVTKAQKKDSKKRKRSRKESYSVYVYKVLKQVHPDTGISSKALGIMNSFLNDIFERITGKTSRLVHYNKRSTITSREIQTTVRLLLPGELAKHAESEGTKAVTSIPALSKYNMPSRC", "length": 136 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "A0ABK0KVZ2-1", "protein_name": "Eukaryotic translation initiation factor 1", "gene_name": "Eif1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "EFGFRSVASAGWGAACPLGLRHVISCGGRAGLEQKARALSSSSTGLFPEGQQRAPPDFSDDICTDKKKNQERGINKWPTTTRNKNYFFVDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF", "length": 192 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0L002-1", "protein_name": "Oocyte specific homeobox 2 like 1", "gene_name": "Obox2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ILQSVQNTDMIEGPSFLPKFQMSSYTPMDTSSQLPQEPSWNLAFQMGQSPLVTSRTPMQSSPSVPEQNLNWQESQGSSRESSIQMQPGPVMDPGFPTLRSPSGHPSHQRPSRPSSRSGFHVPIEPMALSDKHGGKQTGPVAPRKCRKERTQYSAKQKSVLQEHFAECQYPDKKLCLELATLFGVTENEIKVWFKNNRAKCKQKNVPEALPETNGGPEAVSWSTDFPGSIAVVGCDQGEPMATAILDVDSTPKLNCSQESSLDGNWTYDGAMCCLPEDVLDGNDPVTAGDSGESAPVEAQSDLAAAGAPVAMAVDTQNPEECEDLPLLDEGVWQWMLEDFHQLEDWFTKNYIESPSSASHPLD", "length": 362 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LHI6-1", "protein_name": "CD27 antigen", "gene_name": "Cd27", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAWPPLYWLCMLGTLVGLLATPAPNNCPDRHYWIGAGLCCQMCGPGTFLVKHCDQDRAAAQCDPCIPGTSFSPDYHTRPHCESCRHCNSGFLIRNCTVTANAECTCSKGWQCRDQECTECDPPLNPALTSQPSEAPSPQLPPPTHLPYATEKPSWPPQRQLPDSTVYSRLPSQRPLCSSDCIRIFVTFSSMLLVFVLGGILFFHQRRNHGPNEDSQAVPEELCPYSCPREEEGSVIPIQEDYRKPEPASYP", "length": 251 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0LYA6-1", "protein_name": "Prostate and testis expressed 2", "gene_name": "Pate2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLSCLTSELQGSACLCLPSTGSYKHILQHLDLGTMCYKCKKYHLGLCYGLMRSCTLKHRQSCAAENFYILTNRGQSMYHYSRLSCMTNCEDINFLSFERRTELICCKHSSYCNLPMGL", "length": 118 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0ABK0M6C3-1", "protein_name": "Prohibitin", "gene_name": "AABR07037878.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYNKNIKNSISISVCVGGVGGVRARAHAHAHTSPHACTRVIHAFVMLEVGPRDFVHIKKAFRGIDVKKPVIFDCRSQPRNVPVVTGSKDLQNVNITLRILFRPVTSQLPRIYTSIGLDYAERVLPSITSEILKSVVARFNAEELITQRELVSKQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAETARFVVEKAEHQKAAAIISAEGDAKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSSSQNITYLPVGPSSVGPSVRQSMFLRLPQ", "length": 286 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0AC58FXL6-1", "protein_name": "Cytochrome P450 2X10.2 isoform X2", "gene_name": "cyp2x10.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSDLRGIYSYMLSTVNSLVRDSSLTNFKKEFCVHAYLLSVCIQYQSSVWSSSRSVTMLTALVLLCLGAFLLYLQLRIRRPKNFPPGPAPVPIFGNLLQLNRISPLKDFDKFAQHYGSIYGIYIGSQPAVVLTGQKMIKEALITQAAEFSGRSNNMMFSHVTGGKGVIMADYGESWREHRRFALTTLRNFGLGKKSMEQRILEEVKHICLLLEESAGKSIDPQHLYHQAASNIIASVIFGSRFNYKDAYFQTLITSVEDLTKITIGPWAMLYEIAPVLRIFPLPFQKAFQYFEQITKHVLKVVEEHKTSRVAGEPRDLIDCYLEEMENKSDHRTSFDESQMVTLLFDLFIAGTETTSNTLRTLTLYLMTYTHIQEQCQREIDEVLGARDHVTYEDRNAMHFVQAVIHEGQRVADIAPLSMFHSAKTDTQLRGYSIPKGTIIIPYLSSSLREEGQWKFPHEFNPQNFLNEKGEFVKNDAFMPFSAGPRVCLGENLARMELFLILVTVLRRFRLVWPKDAGEPDFTYIYGGTQSVKPYRVIVEPRMHGEACKFVD", "length": 552 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58J797-1", "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-233e3.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANAKQLLKNSLDELVEAELKEFQWYLINDHRDISKAEMEKADRLKTVDKMVSCFGPKGAVKTTVDILRKINQNELAEELENKHKQGNCMSARAEGAVLETCKSPPFDYTNTSRELKKKLKEDYEKILVGNSQTGHKKYLEDIYTDLYVVENETGGRERQHEVIQMESKHNQQDRPLKCNDMFKVQPDTGRKHRRILTLGIAGVGKTVSVNKFILDWAEGKDNQEIVFIFPLPFRRLNLIKEEKYSLIGLLNKYFFSISGGLSSLPEKQGKVMFIFDGLDEYRFKLNFKKDDGFTDVNKEMTVSEIITNLLKRHLVPSSLMWITSRPAASSLIPRDLIDQVTEVRGFIDEQKEHYFIKNSSPEVARNIIGHIKKSRSLYIMCHIPVFCLISLTVLQPLLGQESNEKTPTTLTGMYINFLLSQKQQMKEKYRNDTESEANACSFDEIVLKLGKLAFKQLQKGQLIFYKTDLEKCGLDVRQGSVFSGLCTRMFQEENHYSGEQVYSFVHLSVQEFIAALYVFFTYKNKKANLFLDSWKKELKWKLSEKPLFKLHTAAVKKTLQSKNGHLDLFLRFLMGLSLESNQSDMKELLPWLKLKTGMIKDTTDYIKKKIEEENSAERTINLFHCLNELNDDFVEELQKSLCSGNLTAQDLSSAQWSGLVFVLLMSEETQEKFELQKYRRSDEALMRLIPVVKNTTRALLQCCNLTAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVNLLSNGLKSPKCKLEILRLSGCMVTEEGCGFLSSALTSNPSHLRELDLSYNHPGDSGLKLLSQKLEDPNYTLNKLNLDHGGEKWFTAGLHKYACFLTLAPNTAHIELRLSEENRRVTRVGERQQYPDHPDRFDHHAHVLCRESVCGRCYWEIEMNAGDRVDIAVSYKSIKRKGRGYECVLGQNAQSWALICYVNRVAFRHNMIETRLPVKLMSRRIGVFVDHSAGTLIFHNIYRDSMSLIHSVQTTFTEPLYPGFWVEYGSSVKLC", "length": 1006 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0AC58JHM1-1", "protein_name": "Phoenix isoform X1", "gene_name": "pho", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDLRSKGDTSVGEVMEADPRAELIFETPPPDVVSSINACFEEIDSALKIRRDPSVHSPPSDSDSESLFITQSVTKVVHTKRRLRSSKKPDSISDDSGYVRERRLSENQQTECEEESRSLRSSRRKRSKWEMYASARKATFPFLMKSLKTQHLPIRKHQILENSEVGGFFKCIKKIKTGSVKMGKVISSHLFQSPISDSSEEEDQNSEHDVISVDKALFVPGYKRGINFKWLPDFIRERRTLENYLSNGVDKEKKTEQIIEYRQRNQHPQRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDLEIAECAENSHEGHKVVIEETQRQTVEEASAHLEHEDDLNCKVVEYRKRKRHPKRTSAKALSKSSQVSKKPKKQDTHEVLASCSDHEDIESVECAENSHEDHNVVIEETQRQTVEEASAHLEHEDDLNCKNQPDVDQPNESNFIGPPQEGDISTQSDTQQTDSDIGSVDLFSPLNSPKRDDQIPNTTSITANVEENDQDSDVTQIESEGQHVSTFTQETQKCFANEEYDSDETHIDTESLSRFKPRTPNKQFTSTKHPEIPQFRVQSPKPPSRQAETVNVQLSPKHLPLSNVPLSEVPISPCESAIVGRQKTMVETETDSPMFKITGPSFLKRKRKRTKDKNAAADFKQHDTNGDVGQMVSCPGDDITGLKAVPIENIEACGVEHEMAIGEQTEELGLKSKELLEESVLSTVNSVSTKSKREKMKKYKVKECEAVENQLVETSKKAKKKKKDKERIATSYPEENNLTNIQSNEGFDSAELRVKEVNQSSQSLNTDQPTCVQTSEEITGETELKKKTTRHETDDPLYESVGLDVTLASQFDVGLRIDEQQEGLVTEEAERDERLQGKAMKVAKGKKKIQDTSFQVDHDIGLDKQRSDSGAKPANLDLDGLESLTIKKKKKKKKKHKLKEKTDPKLDFDFDHNVQFFQTDRLQTTDSVLLDSTHTNKQKKKKLKCQNDTDQSSDLKQLHVVGSKLQTIDLPKTDKHMERTGVSSSDALLEHMDDRTLGMRENNTIQTDQIEHLQTSEEVTRCSSPRLSSDKKREKTSVHPNLDASSVFQFDGFKANEDQAITQNTTKEKQISSEQLENNLVGPPSQVENIANVNSSVLLDHTHMNTLREGQLKEQTYKELALAFGLKQLCIVVNKLKTTDLPKTNKNMEGTGVGSSDELLKHTDDRTLETRENNTIQTNQIEHLQTSEKVERHSSPRVTRLSFAKKWMKTSVDSNLDASSGSQFDGLNSMAKEDWTFSQNMDLPLKRTKNKQKDKERTGVSSDALLKRMDDRPPEMRKKNTIQTNQIEYLQTSEKVTRRSSPRLTRLSLAKKMEKTSVDPNLDASSGSQFDGLKEASKEDRTAPRNSIEEKQSDAISSEGLENNPAHLVSTNKSDNTSPSSQVDNIVGLQSDANSVLLDHTHTDKQKKKKIKHKLIEQTEKELTSEVEDNVQPFQFIELRAMDLPSKRITNKKLKDRKRTGVSSSDAVLKHIDDGPSDMRENNSIQTDKIEHLQTSEEMTRCPSPRLSSDKKRKKKYVDTNLDASSGFQFNWSNGMAKEYSKNSTNISSLDNMHTSKQKKKKKQKLKEQKNVESVGDNVYSLEPDQFSGLQITEIKTKKKDKKRTKQANVEENDLKGILSNKAFKASQTYQLEHIQTSEEIKGRSPNAASKSAKKKKKKKNETKNPQYESVNLDLSLAKEDRTTTQNHTEETQGDGNAVEHLEMNPAGLIKVSKKKKKRENAGIVQLDNIIGLQSGSSTDVKSSVLSDSTDTNKHKKKKRKTLKEQENVEAEGDDVQSVEPDPFSGLQITEMTTKKKRKHKRCEEQRCLRGVSSHEAFKAPPTNLLQHIQTSEEISQCQSPNVAALENGGSPYQLENITEMQPGNSIDINSSEILYSTCTHKQKWKKLKQQENVEADANDVHSAELNLFSELKISEPTTKKKKHKKCVEKCALKDISSNEGIKAPQTSQLEHVQTSKEITQCQSPNAATLKSEKKKKQKRDETEVPQYLDASSVSQFDDVTRLKKQAKVDRTTTQNSSEETQNDDISSKQLEMNPAHLIKVSKRKKKREKAGSPYKVDKIVGLQSGNFTDVNFSQLSDSKRTDKQKKKKKIKLKEQENAEADVDDVHSVELDQFSGLQITKPTTKKKRKHKRCVEESGLRDISSNEAYKAPQTNQLEHIQTSEEITPFQAPNVAALKSAKKKKKKRDKTVEPQCLDASSVSQFDDVKTRAKEDQTLTPNSSKETQGDDSAVECLETNPAGLMKVSKKKKKRENAASPYKVDNIVGLESGNSADVSSSVPSDSTDTNKHKKKKRKKLKKQEIVEADLQTSEEIIQCQSPNVATLKSVKKKKDETKEHQRLDVSSVSQFDDVSRLKKRAKEDRTTIQNSSEETQSADISSEQLEINPAHLIKVSKRKKKRENGRSPSQVGNIVGLQSGNFTDISSSVLSDSTRTDKQKSKQKKKLKEQENVEADANDFHSAEPDQFSGLQITEMTTKKKKKHKRCVEESGLRDISSNYAFKAPQTNQLEHVQTSEEITQCQSPNVAALKSEKKKKNKRDKTDKPQYLDESSVSQFDDVKKRAKADRTTTHNSSEETQKDNISSECLELNPAHLMKISKRKRENKSLGLLSENTADLNSSSLLDGTDTDKHKKKKRKKLEGQENVEADVDDVHSAEPDQFSELQIPEMTTKKKKKHKRCVEESGLKDISSNEALKALQTNQLEHIETSEEMTIKTVKKEKKKRDATEEPHYKSVDLDVSPTESTTEAKLNPTKHKKKRKQSFSGSHDAHEAPERKRKKDRN", "length": 2809 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A0MGZ5-1", "protein_name": "Heparan-sulfate 6-O-sulfotransferase 1-B", "gene_name": "hs6st1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNDTERNMVERTSKFLLIVVGSVFFMLILYQYVAPGVINFGSPHGYLLGEEDMTIFPTPDPHYVKKYYFPIKDLERKIDFEIKGEDVIVFLHIQKTGGTTFGRHLVQNVRLELPCDCRPGQKKCTCYRPNRKETWLFSRFSTGWSCGLHADWTELTNCVPGVLNKRESKSKKMRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELPPCYEGTDWSGCTLQQFMDCPYNLANNRQVRMLADLSLVGCYNLSTVPEKRRSQLLLESAKKNLRDMAFYGLTEFQRKTQYLFERTFHLKFIRPFMQYNSTRAAGVDLDNDTIQRIEELNDLDMKLYDYAKDLFQQRYQYKHMLDRREQRLLRGHASFHSPFREDGAGGEGTARLPTEDYMNHIINGW", "length": 407 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A1EC97-1", "protein_name": "Dual specificity phosphatase 14", "gene_name": "Dusp14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSRGHSTLPRTLMAPRMISEGDIGGIAQITSSLFLGRASVASNRHLLQARGITCVVNATIEIPNFNWPQFEYVKVPLADIPHAPIRLYFDTVADKIHSVSKKHGATLVHCAAGVSRSATLCIAYLMKFHNLCLLEAYNWVKARRPVIRPNLGFWRQLIDYESQLFGKSSVKMVQTPYGIIPDVYEKESRHLMPYWGI", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A1XQX2-1", "protein_name": "Neurexin-1b", "gene_name": "nrxn1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMILHLGAHLLFIGLIVCKANAGSSLRFTGSDEQWVAFPMWNACCESEMSFSVKTTHLNGLLVYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVLSDVAINDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSLQLTSKTVKDHTSFTGWIMDVKVNDSEPAIISSAGVHEDLCGSENTCLNGGVCSVVEDKPTCDCSQTGYQGKDCSEGLAHLMMLDRGMEEYVATFRGSEYFCYDLSLNPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPKLQIHGVVAFKCESVATLDAITFETPESFLTLPKWNAKKSGSISFDFRTTEPNGLLLFSCGRAKQHNKEAKSPVTLKVDFFAIEMLDGLLYLLLDMGSGTTKTLALNKKVNDGEWYHVDFQRDGKSGTISINSVRTPYLCPGDSELLDLDDPLYLGGVPESSSGTVFPTGAWSALLNYGYVGCVRDLFIDGRSVDVRRAAELQRAAGVKPSCGKEPSGKCVSEPCLNRGVCREGWSRYICDCTGTGFLGHSCERDATILSFDGSKFLKVQFSAAMHTEAEDVSLRFRSLRAYGVLMASTSTHTTDTLRLELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDLPTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSLMFNGKPYIDLCKNGDIDYCQTNAPIGFKSIIADPVTFKSCSSYVTLPSLQAYYYMYLFFQFKTTSADGLILYNSGDGNDFIAVELVKGYLHYISDLGNGAHLIKGNSIKPLNDNHWHNVMISRDPNNLHTVRIDTKTTSQTTLGAKNLDLKGDLFVGGVPEQMYKDLPKLVHAKEGFQGCLASVDLNGRLPDLMTEALVCIGQIERGCEGPSSSCEEDSCANQGVCLQQWENFTCDCSMTTYAGPLCADPGSTYVFGRQGGVITYSWPPHDRPSTRVDRLALGFITLMEDATLVRVDSSAGLGDYLKLHIVKGNVVAVFNVGTYDINIEENGKLVNDGNYHIVRLTRSGGNATLQVDDLPVIERFPPGHIDSHRLGTGRLPYRRLVEESLPKNGRQLTIFNSQMTIRIGGWQKQQVSGFQGQMSGFYYNGLKVFSMAADGDPNVRMEGSVRLVGELQSSSTPHGGATVYQSSVTEISSTTSNTITITYSTPADEQQTTDELLVASAECPSDDEDIDPCEPSSGTLCCFVPPAGPTGPAISSFPGPAEVFRESNGTTGMVVGIVAGAALCILILLYAMYKYRNRDEGSYHVDESRNYICNSNGAALKEKNTADDDSGSKSKKNKNKEYYV", "length": 1470 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A2A7I1-1", "protein_name": "Zinc finger protein 978", "gene_name": "Zfp978", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWECLNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVVEQDTQHIFNEHGHIQEKSFKCNESSNIIHESSESTPHKTNHRDATLQSSNLKRHKTGTTKQVCTYKDCVNCLKGSSIISLNQGTHVEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYPGKKSYKYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCSECDKCFTQTSHLSIHRRIH", "length": 335 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A8N2-1", "protein_name": "PRAME like 25", "gene_name": "Pramel25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICGHCPDQDESLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPEWPFPYLSLGKQINNCNLETLKAILEGLDILLAQKVQTSRCKLRVINWRDHDLNLWAGSHEGEGLSEFTTEKQPIENSPGCEVKKELKVMTEVLRMKGRLDESTTYLLQWAQQRTDSINLFCRKLVIEGLTKASVIEIFKTVHADCIQELILRRICIEELAFLNPYLKLMKRLFTLTLDHIIGTFSFGDSEKLDEEIIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDYLPYCLNICELKHLHLSDICLRDLLLEPLGFLLERVGDTLKILELESCCIVDFQFSALLPALSQCSHLREVTFYDNNFSLPFLKQLLHHTALLSQLISECYPAPLECYDDSGVILTHRLESFCPELLDILKAKRQLQSVSFETTQCSKCGGCYIYDQETQCCHFVELLLA", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2A9Q9-1", "protein_name": "MAGE family member B5B", "gene_name": "Mageb5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPRGQKNKHHRNRLKNKKHNQEKVHPQKDESQEKGHHKRDDFQDHKEARDNAAVEEKSSCSSPSVPGETLEKPPASKTSSDAGWLSCVSSPATVCGDELEFDDGTYFHCGGNSLYSEYRTCQENPCKHCLDMYVNLVEQYVLYKFKMKKLIDRNKLIDLIEPKYRYNFSDIFKRAFENIEIVFAASVIEIDSTNHVYDLVSKLKLPNKGRVCPGRGLPKTGLLMTILAMIFMNGTSASEEDIWKFLNYMQVYPGRKHFIYREPRKLITQDFVKLKYLEYKQISLSDPPCYRFQWGPKAYTETTKMKVLEFMAKGSGVEPSTFSVQYTEALREENQKTKIRKWYPILAQKHCPGHSHQHVQKVMKPQ", "length": 366 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ADW8-1", "protein_name": "Predicted gene 15128", "gene_name": "Gm15128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANREDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHDSRRSRNRFRRAPVQSERSHVYSGRTNNYTDRPQHDLSNRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIAHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESFDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW6-1", "protein_name": "PRAME like 22", "gene_name": "Pramel22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MHRLLREEALAISSLKDLPNMLFPVLFEEAFIFGYTKILKAMIPEWPFPYLSIAVLIDNCNLESLKAVLEGLDILLAQKVHSSRCKLKEISWRDTNHGLDGIRPGSHEVEGLSEFMEQKHPNCVEKKELKVTTELSVMNGRLNESDTYLLEWTQQRKDSIHLFCRKLVIQSLTKATVIEIFKIVNADCIPELELCSLCLEDLAFLNPYLRQMDNLLELTLDHITDSLSIGDSEMLEERMITLVSQLPTFPCLQKLCINDVYFIYGNLKEFLGCLKKPLVSFCISNCELSQSDLDYLPYCLNIFELKCLYIINIHLQYLCLEPLGFLLESVRHTLGCLALKSCNMGEPHFKSLLPALSQCFHLTDVNFQENELSLLSLKQLLQHTSKLTQLSYEMYPAPHECYDDRGVILSHRIEQFCPEVLDMLRAKRQPKDINFVTTQCSKCGIYYVYDLETQRCRFLK", "length": 460 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AGW7-1", "protein_name": "PRAME like 23", "gene_name": "Pramel23", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNVNSPPTLMKLASQRLLREEALAISALKDLPNMLFPVMFEEAFINGHTKILKAMIPLWPFPYFSLGMMIKNLTLDTLKAVLQEIDILISKVVHSSRCKLKEIKWKNTDYGLQGIWPGSHEFDGLSEFMEQKQPDCGVKKELKVITHLKLMEGSLDECATYLLQWAQQRKDSIHLCCRKLKIQGSINATVIEIFKIVHADCIQELELCCLCLEDLDFLNPYLKQINNLIRLKLDEIKGTVSMGESRNIDEEKVITLISQLPTLQHLEKLCINDVSFIEGNLKECLRCLKKTLEILCITNCYLLQSDLDYLPYCLNILELKCLDFSNIPLSHLFLEHLRFLFERVRHTLECPILKSCEMGESQFNSLLPAISQCCQLTEVNFYDNELSLIFLKKFLHHTAKLSQLTYELYPAPLECYDNRDIILSHRLENFCPELLNILRAKKTAQGGHLCYNPML", "length": 455 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AHC7-1", "protein_name": "SSX member B14", "gene_name": "Ssxb14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVISCEKIPMEVLHKPKNICKAFQDISTYFSGEEWGKLTEWQKSAYMYMKRNYTRMTGVTVNQPVFMSGKEQAKQSLVKGIEVHDSEDECFEESFGVTPRKRMKLTSVTISIHNVEGSLASGENDSNLAETDGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 168 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AK42-1", "protein_name": "Pre-mRNA-splicing factor CWC22 homolog", "gene_name": "Cwc22rt5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKSSVAHMKQSSGHNRRETHSSYCRSSSPEDRYTEQERFPRDRDYSDYSRSDYERSRRGYSYDDSMESRSRDREKRRERERDADHRKRPWKSPSPDRSPARGIRQSSPQEEPTWKKKKDELDPLLTRTGGAYIPPAKLRMMQEQITDKSSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIGFLKECGLKLAQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDHPVILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDSDSNTDQGAGSSEDEEEEEEEEEEEEEEGEDEEGGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFAESQTKELCNMILDCCAQQRTYENFFGLLAGRFCMLEKEYMESFESIFKEQYDTIHRLETNKLRNVAKVFAHLLYTDSLPWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSASDSSDSDSDSSESSSESSSEASDSSSSSSTQSSTSAKGTRKKRQGKARGEEVDKLARGHQALERRQGGREDQRHQEGRTERARSERHRAQNSRDADWRDSLAKHIDDRSHENSHSRVGNGREQGSHREPEDRHGEPKKKQREKRFFL", "length": 830 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE0-1", "protein_name": "Reproductive homeobox 2F", "gene_name": "Rhox2f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYLLDVGPEEDEENANGVKTLMVLLAGDGRNEGESGRGLPGSGASAAEGYRAGEISAGGPAAQVADLMDDSNQEDLGATACDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHLWRHSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANE1-1", "protein_name": "Reproductive homeobox 3F", "gene_name": "Rhox3f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSMSNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDNTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEALRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREKYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ASJ1-1", "protein_name": "PRAME like 14", "gene_name": "Pramel14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDLEAPPTLLQLAAQCTVRKEVLTISVLQNLPMKLFPPLFKEADILRKAKMIKLLVEYWPYPSLLVGLLIDKTNLETFQAILEGVGTWLKRKYRPRMGKLQVVDLRNGHHDFWDMLAGREGGDQLVETMPEKQEVEGHSRRQRLRVFSDLSFKSSRHEDKQQTHLLQWAKDREGFLHLCCEKLEIGALGVSKVKKVLKLLQPEFIKELELNTVGNLSKLTKLVPCISKMRNLQKLMLVRIFGRHTYTPLEERNVTKILSLFPKLSYLQHLTIDDVYFLRDHMNELFRYLEAPLLSLTITLCQISQSDLESFSQHWNYGQLKHLCLKGVSLSTLNVTPLKFFLESVADTLQTLELEDCRMKDSHLRILLPALTKCTRLTSINFYDNNISRDVLQDLLHRTANMSQLTMELYPAPVEVYNEWSYVQVERFSQLCAELMNTLITVRRPKSVCFGTYSCYDCDTHCIYGNQTTFCECLE", "length": 475 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2ATW2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4x15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADIHNVTEFFFLGLSSNQEVQRVCFVIFLFLYMAIVLGNLLMVVIVAVSRNLGSPMYFFLSSLSFVEICYSSTTAPKLIVDLLAEKKSISVWGCMAQLFFMHFFGGIEMFLLMMMAYDRYVAICKPLHYTSIMNRQVCTVLVGMAWMGGFVHSLAQVLLIFRLPFCGPNIIDHYFCDVLPVLKLVCSDTFLIGLLIVVNGGTLTVISFVVLLSSYAVILFHLRTQSAEGRRKALSTCGSHVTVVVIFFAPCVFIYLRPTATLPIDKMVTVFYTVITPLLNPIIYSLRNAEVKKVIKILCTRATKVDKK", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWL9-1", "protein_name": "Reproductive homeobox 2C", "gene_name": "Rhox2c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSVNYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGASAAEGYRAGELSAGGLAAPVADLMDNSNQEDLGATGCDQEKEKQPEEPVPDSMGDLENVKRVSGPWSTVNPVRVLVPKFRHGWQQSFNVLQLQELESIFQCNHYISTKEANRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2AWM0-1", "protein_name": "Reproductive homeobox 3C", "gene_name": "Rhox3c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVERAGRNLFQVNGHRSALLPELPQDYHRASRSVYGCETKMDSTQGTKVLPAEEARNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BED8-1", "protein_name": "Predicted gene, 58953", "gene_name": "Samt1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQFVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEE3-1", "protein_name": "Spermatogenesis associated multipass transmembrane protein 1d", "gene_name": "Samt1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDQLIVDTRSVIYRFINEKDCIYKLSGLLSSLAAFMLEVLIASILSWRLWEFDSNVVQLVSFGLFEAYYPQQFNISGTLTKMLVYTPIDSTWNISTEFMYAQNLVVWAILMKPVVLVFCVMAIKISCTKNPLVEMQIYCYKISALILSVSSMFTFVSVIWNHMVDFYGHTTLDFPSDFPVKKEALTSKHLTVVLPVGLLIATMSLFGVIMFLSEISDLKLKRPVKANDASKMGLLDA", "length": 237 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI6-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 10", "gene_name": "Msantd5f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLAWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BEI8-1", "protein_name": "Myb/SANT DNA binding domain containing 5 family member 8", "gene_name": "Msantd5f8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQREDNRVQSVRSDKEANRRRRLRQEGQSSSGPCDSPWTEDEIWILLQEWAMVEYELGDPGNKMHAKAKSLSRRLSNRGLRKSKNSCLDVMVKMKDLHTRLCNERPRAYRLYSTYEWILYEILGHPRSQGGYVPGLWFDGHSKPPASYAPSLCIGGAISPGPSFSPWTDPEIKIFLQEWQVVEREIGHPGQKIKQKSSLVCQRLYHRGLFKDIQSCLDLMWTLKDLHSTLSRERSRTVPLFSPYRDYLERIFDPKCQRGHVPGALYNWSGYHRPSSSPQTPMVMPSPVYQPWDYGMSASSGQLHGNPSLIMSSQDSLVPRWDAWNATYPLPVQHVLLASLSGDNNFQLVWSPRDESSSPQ", "length": 360 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFR3-1", "protein_name": "Histone H2A", "gene_name": "H2al1j", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTHSQRGEFPLSLVDRFLPEGNHSGRLSSSAPVILDSVLEYLSSNILELAGEVAYTTGRKRIAPEDVGLVVQNNEQLCQLFKPGATSVFDPPEPDDN", "length": 109 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BFZ7-1", "protein_name": "BTB domain containing 35, family member 9", "gene_name": "Btbd35f11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BH64-1", "protein_name": "Secretoglobin, family 1B, member 30", "gene_name": "Scgb1b30", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKLTGALLLLGAALLLTSEGDCGLCPVLQKKVHKFFDGTTEEYVEYLKQYNNDPLVLENAANIKKCSDRMLAEEDKTQATNFINKVTGSRSC", "length": 92 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BHG6-1", "protein_name": "BTB domain containing 35, family member 7", "gene_name": "Btbd35f7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSFGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI40-1", "protein_name": "X-linked lymphocyte-regulated 4A", "gene_name": "Xlr4a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSDDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKTVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI45-1", "protein_name": "X-linked lymphocyte-regulated 5A", "gene_name": "Xlr5a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKKKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQHTIVEKEISKVQNRVIMETQDQDISMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI50-1", "protein_name": "X-linked lymphocyte-regulated 5B", "gene_name": "Xlr5b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSNKEQKAMKKSGKHQRVHKTLPSDDFKNSDEVNPADKPAVGTSGMGSHSSGSDMQEAREPVQKKMQDFKGDDGTGLLMEKRKQFEEDVNASFRSLNENLQSILKAQQNSRQELKSLYCERFGSVYHNWLVEMDRTRDQEEYFSFITQQQMKILQTAIEDHETKLKNAKDMCDTFLKKANDLSKRQKTFIGGQQTIVEKEISKVQNRVIMETQDQDIAMVETYLQSLIHESSEETI", "length": 236 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BI74-1", "protein_name": "SSX member B6", "gene_name": "Ssxb6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSSCEKIPMEVLYEPKNICKAFQDISTYFSDEEWVKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMRGKEQAKQSLVEGIEIHDSDDECFEGSFGVTPIKRMKLTSVTISIHNVEGSHDSGENDSNLAETGGIQVNVWSHRLRERKYRVIYSEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2BIM8-1", "protein_name": "Major urinary protein 18", "gene_name": "Mup18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 181 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CEK7-1", "protein_name": "Major urinary protein 14", "gene_name": "Mup14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG71-1", "protein_name": "BTB domain containing 35, family member 19", "gene_name": "Btbd35f20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLQPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSVYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKMRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTLKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CG92-1", "protein_name": "BTB domain containing 35, family member 10", "gene_name": "Btbd35f10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIHALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A2CGC2-1", "protein_name": "BTB domain containing 35, family member 3", "gene_name": "Btbd35f4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQRMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 496 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A3KG49-1", "protein_name": "PWWP domain containing 4C", "gene_name": "Pwwp4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDSSEYVLCGWKSQLCPARVLSRPRTPAHSKRRGVPFLEVQILPVGEKRRVRSSKVRPLAKSEIISINSLAGKESRGRGSPGQTRASRRALKVALDGLGEGSSFFQGGRAGSRRTSTLAPKVPKEQASSSSSSLGQRLRLRLRQLLPLSLCQRLHLHLRLRLHLHMHLCLQGRNQKGQGLSQRSPGKRVRPDPGPVMMGSQNVPAVPVGEAQAHTAAGLPRSEVEGDVLRGTRVWPSYSKKTPLGKAGGNPGKRKPGTGKRKLRSLSAPASRKGTRSKTEQQAASGPPRHISISPKALKQRVRCAGLEIRAAGAQRKTALAENKDHPGLGTPKPDSKRASAACMPPVLRLRRSLRIASRKKKTHVLCALCGLPEWEPQVHSKVTNTRFKRRGARVQKDAKATNVVSAQEPSTIEQGTLVWFKFQDLPFWPAVVKSVSKIDKMARVLLIEGNMQFERRGIRVPLRKLKHLDCGEKVSLVRRASRLYAQGINWCFSVIDHYREGLSRGSLLGSFMDYYTTQASYPLRRAVQEGDLHIDFPKVSYAELEDWEEETALGGKGPYKKLLPDRMRAAWDRANQKLVDFIVKRKGADQHLLDIVKGRKPSRWLDDLWKSKREVFCIETYLEDDDQLHLVARHLQEVAKEADEALLSLARGDKVRFTMEVLFPEAIIYSIAALDELSYKEAEEKYLRGPPVHYREKELFDKTILKAARKRSAARIRAARDPPVPTP", "length": 728 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A5WVZ0-1", "protein_name": "2.7.1.138", "gene_name": "cerk", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEKQSTLLCSELSVQRRLYEVTLNCAILAWKDVQNAKKHTGRAIYGAVKAGSHCVPVCEIIAVQEKEDDSPCKDTGKWQKVPQSPTDSCQHAFTVYYVERTRQHCWRCSNVTFQYSEHSLCLLWIQTIKEQLALLSAQSTEELAGVHQPLRRKTTRQADLRPQSGPHLFPGFHFHRRDWPHSFSAHPSELRFYIIADGKEPVMKCTGDCFSPRVQLHHLMQLIDGLHQASRKMQFNCQMNIMMFLPPLYHQPGNNGFSLFVSIVTEHANHARDHLKAEADLKKYDGVVCVGGDGMFSEIMHGLVSRTQQDAGVDENSTEETLIPCGLRIGIIPAGSTDCICYATVGSNDPVTSALHMVVGDSQPMDVCSVHSDDRFLRYSVSLLGYGFYGDVLKDSERKRWMGPARYNISGVKTFLSHRYYEGTVSFLPAEENLGTPRDKVQCRSGCSICRRSSSDKLLSKEDEASVSDVDCRDTWTVIRGKFLAINAANMSCACPRSPKGLSPSAHLADGTTDLILVRKCSRVDFLRHLLRHTNKKDQFDHSFVEVYRVKQFRFTPRFQECGSEMDLRESRAGGKHFFCQICRENRACGCMSSQSNWNCDGEILPHTAIQVRVHCQLIKLFARGIEEQPVFEDLYAHCQLNNPPNHEP", "length": 649 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A5WWD5-1", "protein_name": "alpha-1,2-Mannosidase", "gene_name": "man1b1b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLPSTRKDFVSLTLSESGSYSNSKQWRRQSCWRKWKQLSRLQRSLILLTLMLLLVCGIATSPTLIGHWRGMNGDDVKNSFVVDLKNEYRSILPEPPSERKDFDRRGAFGLEKLLQGKVNVSGVLGDQNHGLDLKNADKGSEGQKPIISWRGAVIEEEQASDTDTKDTENQGDPASLALAESRLEAVREAFRHAWKGYKDFAWGHDELKPISKSYGEWFGLGLTLIDALDTMWILGLQEEFAEAREWVAKELSFDKNVDVNLFESTIRILGGLLSTYHLTGDNLFLDKAKEIGFRLMPAFSTPSKIPYSDVNIGKGTAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDPKYKLAVMEVMKQVHKLDGKQDGLVPMFINTNNGLFTHQGIYTLGARADSYYEYLLKQWIQGGRIEQELLEDYLQAVEGVKKNLLKKSTPLGLTFVGELSHGHFSPKMDHLVCFLPGTLALGVHYGLPADHMELAKQLIETCYQMYAQMETGLSPEIAHFNMHDGSTQDVDVKIADRHNLLRPETVESLFYLYRLTRDKKYQQWGWEILQNFNKYTRVPTGGYTSINNVRDPSYTSPRDKMESFFLGETLKYFYLLFSEDPTLISLDKYVFNTEAHPLPVWPQAE", "length": 632 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "A6NCW0-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 3", "gene_name": "USP17L3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NCW7-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4", "gene_name": "USP17L4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NDS4-1", "protein_name": "TBC1 domain family member 3B", "gene_name": "TBC1D3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQSKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKQGDLPPPAKPEQGSSASRPVPASRGRKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A6NJZ7-1", "protein_name": "RIMS-binding protein 3C", "gene_name": "RIMBP3C", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAKDSPSPLGASPKKPGCSSPAAAVLENQRRELEKLRAELEAERAGWRAERRRFAARERQLREEAERERRQLADRLRSKWEAQRSRELRQLQEEMQREREAEIRQLLRWKEAEQRQLQQLLHRERDGVVRQARELQRQLAEELVNRGHCSRPGASEVSAAQCRCRLQEVLAQLRWQTDGEQAARIRYLQAALEVERQLFLKYILAHFRGHPALSGSPDPQAVHSLEEPLPQTSSGSCHAPKPACQLGSLDSLSAEVGVRSRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTRSLPKASKSEERPSSPDTSTPGSRRLSPPPSPLPPPPPPSAHRKLSNPRGGEGSESQPCEVLTPSPPGLGHHELIKLNWLLAKALWVLARRCYTLQEENKQLRRAGCPYQADEKVKRLKVKRAELTGLARRLADRARELQETNLRAVSAPIPGESCAGLELCQVFARQRARDLSEQASAPLAKDKQIEELRQECHLLQARVASGPCSDLHTGRGGPCTQWLNVRDLDRLQRESQREVLRLQRQLMLQQGNGGAWPEAGGQSATCEEVRRQMLALERELDQRRRECQELGTQAAPARRRGEEAETQLQAALLKNAWLAEENGRLQAKTDWVRKVEAENSEVRGHLGRACQERDASGLIAEQLLQQAARGQDRQQQLQRDPQKALCDLHPSWKEIQALQCRPGHPPEQPWETSQMPESQVKGSRRPKFHARPEDYAVSQPNRDIQEKREASLEESPVALGESASVPQVSETVPASQPLSKKTSSQSNSSSEGSMWATVPSSPTLDRDTASEVDDLEPDSVSLALEMGGSAAPAAPKLKIFMAQYNYNPFEGPNDHPEGELPLTAGDYIYIFGDMDEDGFYEGELDDGRRGLVPSNFVEQIPDSYIPGCLPAKSPDLGPSQLPAGQDEALEEDSLLSGKAQGMVDRGLCQMVRVGSKTEVATEILDTKTEACQLGLLQSMGKQGLSRPLLGTKGVLRMAPMQLHLQNVTATSANITWVYSSHRHPHVVYLDDREHALTPAGVSCYTFQGLCPGTHYRVRVEVRLPWDLLQVYWGTMSSTVTFDTLLAGPPYPPLDVLVERHASPGVLVVSWLPVTIDSAGSSNGVQVTGYAVYADGLKVCEVADATAGSTVLEFSQLQVPLTWQKVSVRTMSLCGESLDSVPAQIPEDFFMCHRWPETPPFSYTCGDPSTYRVTFPVCPQKLSLAPPSAKASPHNPGSCGEPQAKFLEAFFEEPPRRQSPVSNLGSEGECPSSGAGSQAQELAEAWEGCRKDLLFQKSPQNHRPPSVSDQPGEKENCYQHMGTSKSPAPGFIHLRTECGPRKEPCQEKAALERVLRQKQDAQGFTPPQLGASQQYASDFHNVLKEEQEALCLDLRGTERREERREPEPHSRQGQALGVKRGCQLHEPSSALCPAPSAKVIKMPRGGPQQLGTGANTPARVFVALSDYNPLVMSANLKAAEEELVFQKRQLLRVWGSQDTHDFYLSECNRQVGNIPGRLVAEMEVGTEQTDRRWRSPAQGHLPSVAHLEDFQGLIIPQGSSLVLQGNSKRLPLWTPKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGELGGHRGLVPAHLLDHMSLHGH", "length": 1639 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "A7TZG3-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 9", "gene_name": "Skint9", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSASCLPGFFMSFLLLQNTVLTQAMRSDIKINIQVPDTEGLLLECTSGSLIPPAEMTWRDSNGNIIPHSTAFNSQDRDGLLYLKSSILLKNRAKGPITCSIYNVTTNQEKKRSIVLPDALFKSENMSLMSNKFSCPSIYLITIIFLNFLRGILVFCCLRRKPVCFRNLMSTVMEALYSKMGVCCLLIWECLLLVLYIAFLPIYVSFRSRAFLLDDTYPLYTNWLWNICIILTVIMVLFPGLILCLLWTLNCYGQVSSLPPTSMELSTKDSEQNSSKSDDSQENYDVNCKILETCESKIFSQHQESCEDDTASTLFIS", "length": 319 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "A7XV14-1", "protein_name": "Selection and upkeep of intraepithelial T-cells protein 11", "gene_name": "Skint11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEPSASCLPGFFMVCILLKITVLTQVMSLDIQINTQIPDTEEGVLVECTAESLFPPAEMTWRDSKGNIIPPSSTFDSQDRAGLLCLKSTILLKNRTEGPITCSIYNKTTNQEKRRSIILSDVLFRPQYMSLMSNNLLYLGIYLIFILFLNFLKGILFCLTKRLVHFRKRMIKIKKVWSNKTRACCPLIWEFLEIVLFIAFLPLYLMFRIRVFTLDEAHILYNNWLWKVCKTLIAMMILFTVLILFLLWTLNRYGKMPCLSSMNIDVSTHDAEQNSSKSAKFQENYDVAGQMILETYEETIFCQHQESCEEYNYDPLLLSSLDALGTCEDEKFSQHQESFEEDEDLQSFSDFKIELYSKLGNLTH", "length": 364 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B0BMZ6-1", "protein_name": "Cilia- and flagella-associated protein 119", "gene_name": "Cfap119", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MITPRSSQSLEMKVQTELEHSPKLQEEPDRSPSLVDSSVIRIGTDEQNESPAEATSSPVEVAEDPGANLFPPPLPQPRICMWKYLDIHSMHRLEKAATVEEMREVLAELLELGGPEQSLRDAIILDLFSHALIFCRQQGFSLEQTSAACALLQDLHKACVATPLGNVEECYRYFTSVLFCHGVRRPPFSIDLFKEEQLLALADYVVNTYFRHFKLYKYVFTPQVRLDLSLSYMGLQSLHLWPEEKEDEEATVEQAATPQEEEPEAVTEAEQQPSEVCILQTYIKCQLNKELRQLQQLVEERLKESEERLSNRLAALERPYQTPPSKGKSKAK", "length": 332 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B0G0Z9-1", "protein_name": "Probable polyketide synthase 6", "gene_name": "pks6", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLKNIDLIEKGVAIVGIGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSEASLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGASNIDYQHTNKHQDSVLKNAIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSDISIVGGVNLILDVEMTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECVGVVVLKNLQDAIKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSAPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTAIQIYSKSNYLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQSTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNLNIELPLYQWSDELYFAQNQVLEQHRKGGPPIDHLGLSNSYYSPFKNSYKTLIDINYKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDHKSNEWIQSSNSNFQLLDHGNDIPSNYNIKEIIKNKCNLSKLTKNELYKNIKSKTGLNYTGVFQGVTECYIGDNCTLSVVSLESQTNSFLNIPILDTCLHGMLILINDQCQIVFDKAIGFKYYSSNIPADFKENKDSFYVYSNLRPRVGGDSYHGTIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFQSSLNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSFEEKDDTYFEFNKVIIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKIYKCSYLRKKNQVISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYHPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLTTNGQLVFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCGMPQQSWYQLLNSCNFKDIVMSKECIFFGSVIQAQKPPISLLNSQPKYDNIIIYGGSINSSFVENIKLDSNSKSLFQIETIQEFNKLISKSTITNDSIVYFIKTLETLSLDNFKQITLEYIEINQKLLQINSLCKHVLIVSDSRKTNYLASSAIGAARYFDEFPLLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKKIQIKPSKISHIEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGRDGFGLSTFEILKWKGFKSNLFVTVNSDKTKQYLLKKYGDLITGIYSNTDKSYVAEIKNKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLTKYGRIIDLNSNHLNQSEFLKNINFKYNHGYHNFELSLFQKNKILKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINDILNENQQIRNIDSIFHFAFQQIACKVQEINMKHLNISHGAKSMGAINLHNQSIKRNWKLINFVMASSALSFIDSTDQCTYACANTLLDSFSKYRVSLGLPSTCINLGLIESTGFVSKNESISVFLDGNGIIPTPINRVLGLLDLQIQNASKFTNSMISNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQNKYLPSNRIDYWKNEMKFEESIKPIPNEIRSRNNNSGKIILLTGTTGFLGGFLLFNMLRLDSCKLIYCLIRNKSKSSYPLDEIINNLKYHQLYEKLNKSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKNYNIPSILIRPPSIFLNPETGIGHSSDLTLLMIQSCYELGYCPNQILNGFILINTITWLSNNITNIIMNDNCWTNSKMNIYNVHGKQIQSSLIIKPLEKHFNCKQINNNDWIDMVNNSNKKSCIKLKSFHSLENIFKSENKGYKSNESQSISLSTKSLLESMGSYNTDLKITDKMIISHIKHIFK", "length": 2924 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G100-1", "protein_name": "Probable polyketide synthase 7", "gene_name": "pks7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNFKNINLIEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYLHTNKHQDSVLKNVIAQSTCAISNRISYCFDFNGPSLSIDTACSSSLNAISQGYHSILNGTSDISIVGGVNLILDVETTKAYSYLSMLSKTHGKCKAFDESGDGFTRGECAGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNEKLSVNEIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRKNEKPVSMMINNFGVTGSNCCLLISEFKKQDYEPYENNYKSNNKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLCQRSVIAASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLINSKLSKYYGYSVLEKLRSIGDDDTTSIHDPNISQPAVCMISVSLFELYCHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYHRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSVLKLNIQSNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIINPVRFTQTISNIYKHIESNQLNNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNKKIDLPLYQWSDETYFAQTQTLEQHREEGPPIDHLGISNSFISPFNNSYKTLIDINNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNQWTQSSNSNFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTHIKSKTGLNYTGVFKGVTECYIGDNCSLSVVSLESQTNSFLNIPILDTCLHGMLVLINDQCQIVFDKTIGFKYYSSNIPAYFKENKDCFYVYSHLKSKSADSYHGSIIVMLSDGSVLYEIQEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSQIPTPSYFKSIIYENDSFHSIVNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSRIISKLLFPLENDNDNEDLPQSLFQNGLMDKFYKCNNFKKKNQIISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVTLLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYLPLTIGESLIETQSIKPSYYDFVIMSNVLHVVKDIKQVVEQMYQLLTPNGQLVFVEPPYKSILIDSIVGSFDQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDIVMSKECIFGSVIQAQKPPISLLNSQPKHDNIIIYGGGNNSRFFENIKLYSNSKSLIQIETIQEFNQFINKSTITNDSIIYFIKTLETLSLDNFAQITLEYIEINKKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSKISHIEASSIPIDYLASFISLFNVGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFKSNLFVTVNSDETKQYLLDRYGDFISGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKNARIIDLTSNHLNQSEFLKNINFKYNHSYHNFQLSLFQKNKIQKCLNEISNAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRYLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSIDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYACANTLLDSFSKYRVSLGLPSACINFGSIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNSGKFTNSMLSNFKPSKFKNNQQISLFLKFDYLMNLKNNSEQTKKENIGNKNIDELFIEKVSELFSTDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTINISIKMILNSLMKNNQCGREI", "length": 2513 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G101-1", "protein_name": "Probable polyketide synthase 8/35", "gene_name": "pks8", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNLEIINLIDKGVAIVGVGFRIPSGNNENSICSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFNECKSFDPLFFGINPSDAHQIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSNIDYQHINKHQDSVLKNVIAQSAYAVSNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVGMIKAYSYLSMLSKTHGKCKAFDESGDGFTRGECATIVVLKNLQDAVKDGNRIYCVINGSSSNVDGGGHMDKVNLYSPSKQSQFNNINSAFKSTNGKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRINEKPVSMMINNFGVTGSNCCLLISEFKKQDYESYENNNNNKSNHKNILIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNYLYQRSVVIASNSNELFEKILNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNDEIFKKSIDLIDSKLSKYYGYSVWGKLTTIKDDDLTSIHDPIFAQPALCMLSVSLFEIYCHWGVNPSFILGHSLGEISAAYCSGMIDLDTFCYTVYYRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNDIVFIEIAPHPTISFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYSINFKCQLENKKSNQSINLPLYQWDDELYFAQTQTLEQYTKEGPPIDHLGLSNSYYSPFKNSYRTFIDINNKPFQYLKGHMVKGKYYFPGCGYIDIIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPSNYNIEEIIKNKCNLSKLTKNELYTQIKSKTGLNYTGVFQGATECYLGNDCSLSVLSLKSQTNSFLNIPILDTCLHGMLVLINDQSQIVFDKAIGFKYYSSNIPSDLKEYKDSIYVYSNLKPKNADSYHGSIIVMLSDGSVLYEIQEVIFKSLIPIKHSLKIEYPNDELYKVHLQSKDSQIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKNQRLFRFVFETIKENGILNSLEENDDAYFEFNELVIKSSKIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCSYLRKKYQMISHVIIHSIKEIINNNIIIRILEFGGGTASLSVEVIGEIVALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGLNVIYRSLTIDESLLENQAIKPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFIEPPYKSVLIDSIIGSFEQWWSFTDTDIRKDRCGMSQQSWYQLLKTCNFKDILMSKECIFVGSVIHAQKPPISLLNSQPKHDNIIIYGGGGNLSFVENIKLDSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNYKQITLEYIEINQRLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLHTLDFDYDSTQNYINSKNNKMVQFINILVDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNNNNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNFKNIQLKPSNISHNEASSIPIDYLTSFMSLFNVGSLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVDLDETKQYLLDRYGDFITGIYSNTDKSYVTEIKNELIKLGSKKKGVDLILNTLPSDFMDSNFELLTKSGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFQLSLIQKNKIQKCLYEISHAIENGELKTIPIKEFTNLNIKDAIKYITNGNIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAVNLHNQSIKRNWKLINFVMASSALSLIGSTDQCTYACANLLLDSFSKYRESLGLPSACINLGSIESTGFVSKNESISEFTDGIGYVPTPINLVLGLLDLQIQNAGKFTNSMLSNLISSKFKNIQQTSLFLKFDYLMNLNDNSEQTKKENIGNKNIDELFIEKVSELFSTDQSRINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIKQLQNNTINISIKMILNSLMKNNQI", "length": 2514 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G110-1", "protein_name": "Acyl-coenzyme A oxidase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKNRIEIIKKHLEVNNSQTTNNKDEVLEKELFNSIDTNINVGELKLLIDSVEESKYKDETREFIRNHPKFKENFIGLDMATYRQLVLEQCAAIANRGLIHFTDIKNNLHRYIGALEMFALYNNNILTKLSVQYTLFGGPIIFLGTSRHEKYIEDANTLKTMGCFAMTEIGHGSNVRGIETTAHYDKQTKEFIIHSPTPTSEKFWIGCAYLHATYAVVFANLIIDGTNYGIHAFIVPLRCPKSGAIMKGITIKDCGHKLGLNGIDNGQIRFDQVRIPRENLLNKYSDVSEDGVYKSQFNTPIKNFAATMSPFIVGRMAITKGCSGAAKTSLSIAIEFSHIRKQFGPSSNKELPLITLSSQQRRLMAPLARTILFDLYIQRLTNELCQEKLPASIHAHCSGIKAVYSWFCVAALQTCREACGGQGYRSANRIAEFKNDCDIICTYEGDNTVLMQQLAKYLLGVKQKQTNTTTNRIYLDGEDAKSLFFNFSNINQLFETREEMRLAELKQIIDNSKESAYFAFNNAIPWAVKLGFAHMTKIVFQNSINTLKLKNVKPLTHLIMLDALVSIEEDLGWFVSNHLISPNVAQSIPFLIQDLCFEVTKVSKQIIASFDIPENCKPSSKDLISDLF", "length": 629 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G138-1", "protein_name": "Probable polyketide synthase 21", "gene_name": "pks21", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLENKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSIAMGFQSIQNGTSNLSIVGGVSLLLDPYISKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSKTSTPSKPLLIGSLKSNIGHSEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNNNEKPVSMVINNFGVTGSNCCLILSQFIEQSINQNGNGHSYPAESQQQQQQRFLIPFSANSVKSLKNYEDLIINDIKISTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTNNDKSSNITIKRNQPLVVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLNLKENNIFCAFLGSLSSFHTSSQHSTKNEILPLDIPSKQSRIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDVNFKCQFNHNDDDVSSIRNSKVNISLPNYQFDEQHYWKVDINFEQYRLNGPNVFNSLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNQDIIINNLEFLAPFVLKENVKHTLQTNVYQLGNTDYRVTFNIKDNKTNQWVQTCTGNFQLISLKDNNNDHSSKYDINQLLSECNFTTLSKQEVYKHSRSITGITHLGAFQGIEELYFGNDCIISKIQVNTENFDIDGKPVYQTYDKSFFNTALLDSCSQTIVGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLESDSYKSSVLVLLEDGTKLLEMDCISLHSTLPLLNSLLINNPTTELFTNNLQCKDSLVNILSIDNNQTFSSISSSNTVTEIIKQTIKPIINEKIVFRILQSFSDLELSKQIIETLNQIFDDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDGDDETIIKSIFNILSSNGLLLIIGDDIGDKYNIDSLINLGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKESKYTNEFMKLISNNHISCKQTIISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGTARYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNQIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISNENQNCEFKVGDNVFGIACDTTASHVIADVLYVSHKPENISHVEAASLPVIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIELMHINKKVVSRLLKSISNALNENKLKPIPITTFQIEDVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKSVDVGDPIEMRKSINQILLENPNIDNIDSIFHYAFAQITKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCSYVSANLVLDSLSRYRKSIGLPSTCTNWGAIKSAGFVSRNELVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKNSNLIVSKFNYDSIKKLSSETSTFQRLDFILNSIKEKDNDSNGGENSVSESIQTKILNKISELLSIEQSKINTDIRLSDYGADSLTSVQLKNFIDKDIKSNVITLQQLQNNTIDMNIQTILEQIKKLDSNETKGKSKNIIKKDSAPTLDYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKIKVIVGNLASPLLGLSKLDFDYISNQINLIINSGADINLASNYEESKVVNIGGFIELIKLSTTGDYQKPIVGFSSVSVFFNASNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLLREVAKRGIPSMLIRPPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPKIDKNILTSPIGWISLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSAMNPSFSFLEKQYGCEMVEYEQWKNIINQSKILSCVKLKTFHSLDDLYNIYNLGNGFGVSKKTKELLQSMNSYEGGMVNEKMIQNHINYIFKN", "length": 2779 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G149-1", "protein_name": "Transmembrane protein 184F", "gene_name": "tmem184F", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLSHINIIYIIWILLFFFTCLISFFLVNRHLVNYSSPNVQKNVVRIVMFLPLNSGLSILSSIFPGIAIFNSLVRNCYMAFTAHCFFSMMTNSIGEKNMLDLFESQGKMKFLCCKVMKLNRKLFNTLRFGSIQFFIVKIFCSIATITCISISEEVHSILNVQSFAPYEFLISLVASIFCTISLSIFLAISKEKLSQYWPMTKYRIMIFIFFIEQFEYLFFALIFLRGPFFLGFKNSFDQTIFILHFTVVVTMFLFSIVYLFIYSYKNYRNKASNEPLVGRNFKDSFGLLNYLDVLNPKDLFIDFASIFKTNNNKFKELVEENGDKKPKKNIEDQNQENSNDQPLSIQMA", "length": 348 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0G188-1", "protein_name": "GATA zinc finger domain-containing protein 16", "gene_name": "gtaP", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSYQIQNQPYQQIQNTHPSFQQVQPMQVPHLQQQQQHQTMIAQQQHTPPQQHTPPQMNMIQQHTQPMLSQPQISLQMQPPSPILASQQQQQHMQSSPILASSNLTNSNNASQTTLPIITSKLLLKKEPIDQEVVNSTHKTTTTNNKPPKQSKRKEKERLEEEKQTVAQQQQYQPPFIPLASNESNSDNPFKGSHAYGVSTTPYGNSQFNNNNNNNNNNNNNNNNSNNNSNNNNGNNNINNNNNNSNNNNNNNSNNNNNNSNNNNGNNNNNNNNNNNNNNNNHNTNNNNSNSNNNNNNGYQQDKKDDYSMMIWSEVGRKINILIRTTSKATKGTPISTQEIAEAIGASNGVTADLVELIKSINDPTYVRKLPPSSISNTPTMGSQSGGMVYNSSPMLSPSTMSPILQHGNYQMGGDMYFGGNNQFSGDKQSALNNVKNSKGGNTNNSGGGSSSGGTNDTQAKKPARRRKMRYGGTELSCHTCGVTNTPEWRRGPNGAKTLCNACGLAWAKSVKSEKQKELLANSTGVNITEPKKAQKRKKESSDNNNNNNNSSDSNKVLKSDDGSNNTNLTNDDDNGYPSSPNSSNSTSPSSHNINNNNNNNNNNNNNNNNNNNNNNNNNNNNIGNNNNNNINNNNTTNSITTPTTTPFPTTIPAMQIVSQLPVMVPQTQQQPHMSGNIISFQALHQNSGYQHYK", "length": 695 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "B0R191-1", "protein_name": "C-X-C motif chemokine 11-6", "gene_name": "cxcl11.6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKTLAAFLLLSCLIAGEVNGQDRSSRARCFCVDKGLNMVLLKNLDKVEIFPPSPSCNKHEIVVTLKNGAGQKCLNPDSKFTKNVVLKAIGKRMQQSVPHSTTTGTVKSSMTSSTSAPTAFK", "length": 121 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "B1AV09-1", "protein_name": "Leucine zipper protein 4", "gene_name": "Luzp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANHEDEIRQLRYLEAANSEEEYNEENDIQSESSRGQAFFPGHPRGRGHRRDSRGRNGHFFRQRFSANHPLLHLTRQVNLESLTRRNGNQSEERQLQQERIQLFFRSLHGLSQSHDHHIGRSHGHYSRRSRNRFRRAPVHSERSHVYSGRTNNYTDRPHHDLSDRPHNQLSVRPHPDLSGRPLHDYSGRPHQNHAVRLQHGHSDRYHLTHTERVLPNNSGIDHPGHTERDNQVQRGRAHDNQSGLAHHNHDGRSHHDHSGRAYHGHARRAHNNQSWRSDNNQSWRDLNQSWRGQNNQSQRGHDNQSQRGHDNQSRRGHDNQSQRGHDNQSQRGHNDQSWRAHNIRSRRDRYHTSLRSSSIQSWMLHERERYHGPRGRNGPRDASPPGSEPEIDRSSAIRERTDYLWVQEHRRNETVELNVGLEDGYSSAEESDESLDRLTCRSMLDTLY", "length": 449 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AY40-1", "protein_name": "SSX member B8", "gene_name": "Ssxb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "METVSFCEKVPMEVLYEPKNICKAFQDISTYFSDEEWGKLTQWQKSAYVYMKRNYIRMTDLGVTVNQPVFMSGKEQDKQSLVEGIEVHDSEDECFEGSFGVTPIKQMKLTPVTISIHNVEGSLASGENNSNLAETSGIQVNVWSHRLRERKYRVIYEEISDPEEEEDDDY", "length": 170 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AYI3-1", "protein_name": "Predicted gene 13272", "gene_name": "Gm13287", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPVHLFLVGGVMLSCSPASSLDSGKSGSLHLERSETARFLAELRSVPGHQCLRDRTDFPCPWKEGTNITPMTLGETTSCYSQTLRQVLHLFDTEASRAAWHERALDQLLSSLWRELQVLKRPREQGQSCPLPFALAIRTYFRGFFRYLKAKAHSACSWEIVRVQLQVDLPAFPLSARRGPR", "length": 182 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1AZM5-1", "protein_name": "Predicted gene 12886", "gene_name": "Gm12886", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLPCSLWLLSVCLLSWCCDAKLPVALDPESESVPKPPVLKTATEIAAIVVFMKTSNETPKSGTYGQSLQDGKNKIKDVEKEVLDACSQLCQSLAQDPNLHHGYILRAYFKEHQFLCCF", "length": 119 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B1B0R2-1", "protein_name": "Spindlin family, member 2D", "gene_name": "Spin2d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSKLTKKRAGRKRQRSRSPALPKRNIVGCRISHKWKEGDEHITQWNGTVLDQVPVNPSLYLVKYDGIDSVHALELYKDKRVLSLKVISKRVVSSGVTDSSFADAIVGKEVNHLFEGEHGSKEEWRGMVLSQAPILDNSFYITYERDPILYTYQLLDDFKEGDLQIMEGFSDPPSLDIDLELVDGLIGKHVEYTNDDGSKRDGLIIYQIETKPRVYLVKYEDDVHIHVTHLEKEL", "length": 236 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "B4F7F0-1", "protein_name": "Claudin", "gene_name": "Cldn6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASTGLQILGIVLTLLGWVNALVSCALPMWKVTAFIGNSIVVAQMVWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARALCVITLLIVLLGLLLYLAGAKCTTCVEDKNSKSRLVLISGVIFVISGVLTLIPICWTAHAIIQDFYNPLVADAQKRELGASLYLGWAASGLLLIGGGLLCCACSSGGTQGPSHYVARYSSPVPHSRGPSEYPSKNYV", "length": 219 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "B7ZW38-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein C-like 3", "gene_name": "HNRNPCL3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MASNVTNKMDPHSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIAGCSVHKGFAFVQYDKEKNARAAVAGEDGRMIASQVVDINLAAEPKVNRGNAGVKRSAAEMYGSSFDLDYNLQRDYYGGMYSFPARVPPPPPIALAVVPSKRQRISGNTSRRGKSGFNSKSGKRGSSKSGKLKGDDLQAIKQELTQIKQKVDSLLENLEKIEKEHCKQGVEVKNAKSEEEQTSSSSKKDKTHVKMESEGGADDSVEEGDLLCDDDNEDQGDNQLELIKDDEKGAEEGEDDRDRANGQDDS", "length": 293 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "B8JKF6-1", "protein_name": "BTB domain containing 35, family member 13", "gene_name": "Btbd35f13", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRFLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGAINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYVLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD1-1", "protein_name": "Spermatogenesis-associated protein 31F1B", "gene_name": "Spata31f1b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD2-1", "protein_name": "Spermatogenesis-associated protein 31F1C", "gene_name": "Spata31f1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HKD3-1", "protein_name": "Spermatogenesis-associated protein 31F1D", "gene_name": "Spata31f1d", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSTMCFLWDTECPLYVYFCFFIIVLIVWQVRQNYQGLKCENRRSCCRRHQKVRQRAKDAASRARRLSREEDEKPCELLSIMKSQSWVPKQGNVRQLLCLDPSCQICEATTLEIRQLLQSKKSQISPALLGLPQRAACLEMPISSESFEWNQDFYSRYSTNSPVVPGNQTLTQLTEELTESTNADGVLLCWTDPLQIGQEFHLADMPMASETLVSPGLEEPVVLMNEEDTVHSNLNYIQQLQDHEALNSQIPFQTLTPQLTVTHPMAVSIVTDAPQPFLSPEVLRLLEIHVKKLMHFQRWGLPRRVEESLKQFMPNPPVYLPPEHNQPVSFILNTSSQDCVHRFEGISPETWYSYMDGQPIQTFWVSEWSSGDQGQRLSCKPIPSPVEKPLLTPDYELLHDLCLSPEGQVDGSQSNLQKKFTQLFCGLPSMHSESLGSTFLCTQGVSKNTLKPPYKEPHFLKVSPPIPLPEAAPPPSSTSPNESLDEPQRAQIGGVPFLTLSECKTLEWHLLQRQLQLQWGLPAVIARPPRVQSHTQYKHKPWNKAKPRETLKFFGPGKPFSALTRELFFIPQHARRLLEFHLQKRLIHLRWGLPQRIQRSINMLLSSTDLQSLPCGGSRLPNVSISQPGKPEAYGSGDTFLPTAGKGTTPMPHLFAKAQEMLKSHDTKCEQIREGKVPACVQSAWKGRIPGDLAAGTLFPNIPQGQPLELQAENNPDLHQEAVSWKPMDLDQEAQAFSGVFIEHCRRPQALSEETIKKLETTLRHKYLAFLSGLQALYCMAPTKATSPTVDQSVITTMPWSVKSPQKPLSQKSPLEALCLSGLEPCTQDDKETSANIAEEFQHGAQGHGRTEKVPPERQPLLNRPYSLDTEIMERVSFYLKRKALDIKLGISLKESVFQEPTATDLESESVQEPLGSPRESTLLQGPPTLCHVPVAPDPDKVCLKQPATAVQVVFQEQNQPSSRAVPHRSARQGSQVHRNMMEAQVHYVQMGTGGEMLNLGEPFSTESQSPGKSKSGYVPTVAGKRKIPGKPKVVGDLGEGDAGLGFSLVSLKTRQDGEQEKRLLHRQLQGSSLQAQTFHLEGACPHSPQESPELQFADPPPEVFMETDSEQDMEDSQSKESIVPEPARTAKAPQPMLSRASQGLPFPRSPTQRKPSQGQPGPGHVPPGHATPASPYTRPSRLPEAGLKNKMKLFFHSIKLKMKSKAHTEPSTVSTPGKVAKTSKENIDRGLPQAKSPTKKTKPEDFRGPKAQFSVVGPCLTPSYILDSKFWPRPRRVGSVSVLGHSYHCPRHCPRLAYANQQRNPP", "length": 1308 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "C0HLM6-1", "protein_name": "Small integral membrane protein 20", "gene_name": "Smim20", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAARNLRTALIFGGFISMVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQPPGLKVWSDPFGRK", "length": 69 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C7G009-1", "protein_name": "Thioredoxin fold domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLILNGNWLVKFGAGWSGHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEYESICIKYNIIGYPSLVFFDEGEIKHYRGPRLFENFKEAIDKHLNKEFVAFSQNQPSKIIVITNENLDLLLTGNWLVKFGAAWSLHCKKLQPVLENLAQHYNSDNENSKVKVAQVHCEEDNSICKKYNITGYPSLVFFNEGQIKHYTGPRQFENFKEAIDKHFKYGVKWSGHCKKFQPVLENLAQHYNSDIENSKIKVAQVHCEGDDSICKKYNITGYPSLVFFDEGETKPYRGLREFDKIKEATDKHFK", "length": 303 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G010-1", "protein_name": "Calcineurin-like phosphoesterase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLKIKFSIISLFILKLVISKPILKFNNNNQFKIIQFTDLHYGSEPVDDIDTIFSQVNILDYEKPDLVILSGDMVTGYEEQFEDDDRNYWKYWNVFTRPFVERNIPWAITFGNHDGEGALSTNEILKIDQTFNLSLSQSNPVEMHGIANYVLKISSSNSLKSEPASLVYIFDSSTKGCSKLDWGCVHQDQVDWFKNTSKSFNKTDSIAFVHIPPVEIIDLWNNYPVYGNYSETSCCFDNDYGDFVSSLVESGDVHGLYFGHDHENDFHGDYKGVDLGYGRKSGAGSYSSKKPLGARVFQLTESPFTLSTWIREEDGNIVSQVIHPPSEFDRKPLQCKMKDKYSKKELIAIKVIGGFLIFLGIVVVGLIGFFGFKHYKKFKKQTLEMQNLV", "length": 390 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C7G064-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKDEKQFQQFPNKGRTVQANTDLPKGSTVFRCAPFASSIEDSDKLATEKYCGFCLQRIPKSDSKECLCKNCKLYSVCKSCRSINESAVEPFQIIIKSTFHLGSDTRDMRLLLRIIANIANGKQGMQTPIDDYQDFMGLTSTLDKVDKEHMTKFKRGVTSISSLISSVRGVGYLKNTITIHEILECFSSVLTNAHQFSYATSKEIGRGVCPTGYFNHSCMPNTTWSLDDQGMLLFSTSSNVKKGDELSLGYLANEYPLKNRRRELLDGYYFFCQCPLCEFQSNLSGYLCEKCKEPLLNDSIVYHEPSLTNPLDTGIGLIKHLRKMIDFRQQSVEFKKMFSSEQLSNILQKGVPKHIQSVFNCDASDNEELQQIVEISERSIKSLPLINGEPIDFYPLSDRNYYEYFKQLKNSKISSPEELQRIKDKILSLINPTIYNSFKDKIDKRLLI", "length": 449 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "C9JPN9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 12", "gene_name": "USP17L12", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLKLSSTTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "D3YTW8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r258", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSIHQFVILVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAESRATQTILIVVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNL", "length": 314 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTX5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r259", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY1-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r107", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLDFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YTY2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r138", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YXI8-1", "protein_name": "Predicted gene 10377", "gene_name": "Gm10376", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQAGSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQNNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKILCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAVMSNPCA", "length": 184 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYI9-1", "protein_name": "Predicted gene 7347", "gene_name": "Gm7347", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3YYY1-1", "protein_name": "Secretoglobin, family 2B, member 7", "gene_name": "Scgb2b7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACFPFFEAYASVLSGSRVWLYQELQAFDATAEEKVALEKIQDCYSEESIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z236-1", "protein_name": "Predicted gene 3676", "gene_name": "Gm3676", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGSQTVSFRKASPQTPNIDENEKRIKRLEKLKRDLQNIKNERDILQGILAKYKDLNDRTNFETFMLEMQHNQMMTDLKRMSQDISEALYKCQHLTKENQLYCCRNCHLLIESNLIQHKVRMLWKENRQLLRKQIALEECNIKTKTLCKEGSQKIKDEYSRQAAGKQIIVVPGSKEEAAMSNPCA", "length": 184 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z8D1-1", "protein_name": "SIGLEC family like 1", "gene_name": "Siglecl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLWGLRSLLLLHLGFLSPVLVDTKKTAVEDGLCSTVPCVIEFSKAPLRKPMIVSYRLNENISFHAGTSQPRGPVADLSTEEVEYCILLTHNMLGRKNMTYSLYVGLGAQKDLTQKQELHIPGSSMAGEPVSLTCTIHSTCQESKALFLSWKGPIMSSSTTVPINPSSALAIDPKPEDQDTTLRCHLKLSLDNLSSSKVVKLQLVSPARLLNYSCLLKRTLTCSCSFHGIPTPSVQWWVGRTPVSVNSIDAILHMTSTTLESWTNSTIHLMWEPEIIKSLRCEGKNQYGVHASGIFLIPDKSSVSSVFLRGLIQGIVYGAIASALFFFFLVVLGMKILNWWEENQTCKNEEAPTLKKPVWGGAKPAEVGS", "length": 369 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z8T0-1", "protein_name": "High mobility group nucleosomal binding domain 2, pseudo 3", "gene_name": "AABR07053402.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKRKAERDAQGDEAKAKDEPQRRSARLSAKPAPSKPKKAPAKKREKIPKRKERKADAGKDANNPAENRDAKTGQAQKAEGAGVAK", "length": 86 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3Z9U8-1", "protein_name": "S100 calcium binding protein A7 like 2", "gene_name": "S100a7l2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSSEQEVMKLFDLFQNYHVRRTDKLDVQETKRVLREFFPNFMKALNASGIKILNDLEKEITLDEIWDMIGRMAMAYNKKNSNALKD", "length": 91 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZAM9-1", "protein_name": "Olfactory receptor", "gene_name": "Or4f60b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKKVNYSVTSEFVFLGFTNSWDIQLLLFLVSSMFYVACIMGNCLIIFTVASDTHLHSPMYFLLANLSFIDVGISSATSPKMISDLLKKHKVISFRGCVIQIFFNQAIGGAEMVLLIAMAFDRYVAICKPLHYLTMMSPQMCLFFLITAWVVGLMHSVIQLIFIVNLPLCGPNILDSFFCDLPQFIKLACMNTYRLELLVSISSGFMSLVSFFLLSISYIVIILTVLKHSSSGAYKALSTLSAHVTVVVLFFGPAIFFYIWPSSTHLDKFLVLFDAVVTPFLNPVIYTLRNKEMKRAMRRVFRHLMGYRQIS", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZC26-1", "protein_name": "Ferritin", "gene_name": "Fthl17fl", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEDAINNHIRLLLQASYSYLSMAFYFDRDDVALGNFKRFFLSKSHNCKASAEMFVFMQNKRGGHVFLPSIAKPDRESWHGGLRAMECAFRMEMTINQSLLNMHELAKGKDDAHLCDFLGQHCLDQQVHVLKKMGGYLTNLRQMGAPEQGLAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCM9-1", "protein_name": "Dynein axonemal assembly factor 3", "gene_name": "Dnaaf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTTPAGSGNGFGTVSWWGLSPALDLQAESPPVDPDSQSKTEHKIPELDALLLGSVDGRHMLRTLARAMLWPLRRFNFYVLENNLEAVARHMLIFSLALEEPEKMGLQERSETFLELWGNALLRPSVAAFLRAQASHLSNLVPEPDRLEELLPWLSLRPLKFRERDALEAVFRFWSGGEKGPEVFPMSRLWDSRLRHYLGSRYDARRGVADWDLRMKLHDRGAQVIHFHEFRRWRDTGVAFELRDLSAYHVPNRTMASGRLLSHRGERVAARGYWGDIATGPFVAFGIEADDKSLLRTSNGQPVKTASEITQHNVTELFRDVAAWRGPRAIKGNVEETKSPEPDAPAQEPFTIHFLPLDSSQTLHHKTCYRGRFQLLYVSCGMIHLLSPELGACVAPGGNLVVELARYLVDLRPKELKAFSDRVVEIAQAAGFAPHTGTKPSETFARFYKLGDSTRGGGDSAVESGPVPSKVLAPTPESINPPQADQAPSLEVMSPPKVDQTPPLEAMSPPEADQAPPLEAMSPPRADQIPPLEAMSPLQAEVVLPLEAISPPQADLAPPPEVISPVQEALAMSSAIAPLKHVT", "length": 583 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZCW3-1", "protein_name": "SPATA31 subfamily E, member 1", "gene_name": "Spata31e1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "METFLLLMNSISDFWMSSSSMSTVMDMIFAILCGVGFFFLLIPFLKEYPGSPPPGSKKNISEVVKRRQSKDRKKSVTVDGCRDSQKNSLDIQHDLQTMESPIQHLLLDSSPHPFWNSKEKLNQLSLPQLFSYLKVLEALIQQKFNQLLLGLSSVLSESVVATAWVSREPSSGERKTVRFSDSLGFDQALPLAKGPPQRCLDQPLPHQLVTPSLVGMTEIQEQENLPNSISYQTPSIFQSRARGTAYPTTATGIQVPLPTTNEPCHPGLNWKDIPSCKVQNCQGASSQPTESLARCTLPTKNTRSASIPPEHYLMVHHHEQPQHEEKAINLGEQQRTHARFLPSKEPAQLQGDSPPNSNGYGKNWPELNQPAQPSTLNSKTYKWNQMMGPVPTGMLLKKVIAKYGIPNTIKKDLKLRVKDLLCTSSSTPGESLETKNLTLRTDEHSMNTTENLSFLDPKTTMMKSNIMQLPMKHRQLPCDSKAEPYTKAAFILENLHHQDPGGIRVETASSARLRSPLFEQSPPEVQKTQSSPPPIDSHGHSRSHPDQWQRYQSVQPHALCSQAQPQQSRSIQGTGRSILQPNISVWMSKHERWMRSEDVASGHTSWSSRTVGYRDRVSPSVAKQTNILKIKEESPHVWRANLGSGEITNEQALNNSNEDFEPIEAKRSQGHLQMPTQQNTGYLHLKTEEYSNNDLKVNKQPQAWSVSHHADGSNTVHHAMVKLPSQHSLPSLQNGWQDPKTSQGLGDLLMNRDQSVETQFRVHKDKTEATNDSVFHPSEKRPSNLKYGGISQGERLGRVKSSISSFTQLKDSAKTESKSSPNIGGKREAPSKSSLKFIWNGAQYENLSTKLKGQRDSLKKDIPPPVTEQTQEVVHRINVIYSTAVELQSLMDSLVHKLVKTVGEPSELTRKHMTKVQEYKMESLPFQLGSSSQPSKGLHDPNKSRSVRRMSDDHTSPKEPNNHTFTYRGNRDKMQAGVDVQRVCYQHLDKVKIGFGQHSTPMRNGNPCFHKKAGDKQESSLADQSTGDADQTKPKNEIVGSPHRIPERHNQSSRYREIRDNQEPSVDHKAIDPHQNTKKGMGYSQLMSPKENHPVKISGTAAQGASDPEEIRTKSGKECSPHRSPKMHDHSLRHREVRDKPQPGINTQRAYDQHLNSPKKRMTSENLLTPKGTNHPCWHRVTGDKQQSSLSDQRACDPEQMRRSGMSSYPQRSPKVYHLSCSSEKIGEKLLPLVNDQRTHDKHPNSVKTRGCDNLPTPKGSNHPQGYRVIEDKQQLGLAYRRTCDPGQIKKSGMGKGPCKDTEECNLLYRYKIIGNKQQPGIVHRACDRHQSSKEGMGQGQPMNPKVCHSAKHRRTGGQDQSGVAAQGASNPR", "length": 1373 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDD6-1", "protein_name": "Synaptonemal complex central element protein 3", "gene_name": "Syce3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADSDPGERSYDNMLKMLSDLNKDLERLLEEMEKISVQATWMAYDMVVMRTNPTLAESMRRLEDAFLNCKEEMEKNWQELLTETKRKQ", "length": 88 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDJ1-1", "protein_name": "Olfactory receptor", "gene_name": "Or13c3f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDDMDKNNQTFVSEFLLLGLSGYPKTEILYFVIVLVMYLVILTGNGVLIIASIFDSHLHTPMYFFLGNLSFLDICYTTSSVPSTLVSLISKKRNISFSGCTVQMFVGFAMGSTECLLLGMMAFDRYVAICNPLRYSVIMSKEVYVSMASASWFSGGINSVVQTSLAMRLPFCGNNVINHFTCEVLAVLKLACADISLNIVTMVISNMAFLVLPLLLIFFSYVFILYTILRMNSASGRRKAFSTCSAHLTVVVIFYGTIFSMYAKPKSQDLTGKDKFQTSDKIISLFYGVVTPMLNPIIYSLRNKDVKAAVKYILKQKYIP", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZDT4-1", "protein_name": "Transmembrane protein 92-like", "gene_name": "LOC100364194", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQEAWVLDALTVIFGLLFSLQGVSSNKTIYKCEDIHCPKGFRCCDNECCLERKIWNTDNEPFRILFIILLVMLPLLCICGLVRRFCPKCRELQHEVRTADHQSPPDPPSIAPLESIWVTSLDPPPPYSQVVQKSTPTEPPPPYSLRPEDSTCPMRETSHETL", "length": 162 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFJ9-1", "protein_name": "Family with sequence similarity 24 member B", "gene_name": "Fam24b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSSFDLRTIIMIVIGSGILAAMFLLTGVVLCLYSKIARALNPSGTGKELDDQLCSDPCKTTQDQIIRVNSLNADTCRPFHGSTIGLENCQPLQCFSACGTYEGANSLTPCLCNTKEGL", "length": 119 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZFW5-1", "protein_name": "Transmembrane protein 107", "gene_name": "Tmem107", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRISGLVPSRFLTLLAHLVIVITLFWSRESNIQACLPLKFTPEEYEKQDNQLVAALCLTLGLFAVELAGFLSGVSMFNSTQSLLSIAAHCSASVALSFFIFERWECTTYWYIFAFCSAFPAVTETALFIAVFGLKKKPF", "length": 140 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZG05-1", "protein_name": "40S ribosomal protein S12", "gene_name": "LOC120100003", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEEGIAAGGVMDINTALQEVPKTALIHDGLARGICEAAKALDKRQGHLCVLASNYDEPMYVKLVAALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFEYKK", "length": 132 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGM7-1", "protein_name": "Peptidase inhibitor 16", "gene_name": "Pi16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRNCRVSWMPQHSSAAVSGICPPQEGPWSSYSLWPEPPLLREKEAVAKDSRGVDSTLVQTQGTQPSWRHCVSWAGPPDTAPAAPPQPGWCLCGKDFKSSRQTPDRERQRGLATMHSSCSPWVMLPQLPLLLLLLLLLLTATGPATALTEDEKQTMVELHNHYRAQVSPPASDMLQMRWDDELAAFAKAYAQKCVWGHNKERGRRGENLFAITDEGMDVPLAVGNWHEEHEYYNLSTATCDPGQMCGHYTQVVWSKTERIGCGSHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPCSQCPLGYSCVNSLCEPERKPEKAQDSPPRVTEVPGSRETGIPSLATSESLHFSSVTKVSDSLATEPSPAVETKAPPSLATEGPSSMATEAQSFLTEVPSVSATHIQPSLDEGPVNFLTSTHIPVPKSTDKEASSKSRAASVSPEKSLYPKMSPTETGESPPQIQEEAEPKAELPEREDELPEAEVELPEAEAELPEAKAELPVSSEALVPVLPAQERGGPKASLEHSSYPVPTYLPNFPSASGNATGGRTLALQSSRTGAEDPEKASWDSKNSAPVWGPFPGLLLPLLLLAGIF", "length": 596 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZGX2-1", "protein_name": "C-type lectin domain family 2, member M", "gene_name": "Clec2m", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQTESSLRLSQSSHHRLTFDLKKVVTLWILVIGVIAVLLWGFFSFPKKFTVTRQTKNEVCSDGVKICLHGWNKLNRNCFTHFSHANSWFTAKETCKFHDATLAVFNDQTELDIVMKQMEDIQTFWIGLYKKDFRGPWVWTNGSKYNNWYEVQDYGHCAFLHKSGIDSTNCNDLKEYICTQEGHCP", "length": 185 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZIZ8-1", "protein_name": "Ferritin", "gene_name": "RGD1560203", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAEASSQVRQNYDRCCEEAVNTHIRLLLQASYSYLSMAFYFDRDDVALENFKRFFLSKSHDCKASVEMFVFMQNKRGGHVFLPSIAKPDRKSWQGGFRAMECAFRMEMTINQSLLNLHELAKGKGDAHLCNFLGQHCLDQQVHVLKKIGGYLTNLRQMGAPEQALAEYLFDKLSLS", "length": 176 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKK4-1", "protein_name": "Zinc finger protein 869", "gene_name": "Zfp869", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDTPIVGLSSPDQGLVSFEDLVVHFTQDEWDLLEASQKSLYGDVMLETFRNLTAVGYEWEDEAIEDHCEEPEVNLRDIVSHSEYTHEYEHKEYEEKPPDANFLTSVEGCVETKTSSGPSVCEVCLKTFGLYHLTYNGHHNYDYKELRGSQTEENDCEGNSCDKTSGSLQKEDKIHTGKKLYVCQECGKAFRYPSALQLHERIHTGEKPYECKDCGKAFRGLSALHLHERIHTGEKPYECKQCGRAFTYLSALQLHERIHTEERPCECKQCGKTFRYSRALKLHERIHTGEKPYECKQCGKFFRSHRTLKLHKRIHTGEKPYECKECGKAFRWLTSLKLHEKIHTGEKPYECQECGKAFRCQASYHRHKITHGGETLYECKECGKSFIYPSLLQVHERTHTGEKPFECKLCGKAFRCQSSLRLHERTHTGEKPYECKHCGKAFSSYNYLRFHERSHTGEKPYECKECGKTFTHRSYLRSHERRHTGEKPYQCIQCGRSFSRHSSFKRHQSVHGESPYEQYLIPLSPFSSKE", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZKM3-1", "protein_name": "Protein GPR15LG", "gene_name": "Gpr15lg", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRLLTLSGLFFMLFLCLCVLSSEGRKRPAKFPKLRPCCHLSPRSKPITWKGNHTRPCRPCRKLESNSWVVPGALPQI", "length": 77 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZL22-1", "protein_name": "Olfactory receptor", "gene_name": "Or1x2b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSKWGENETGVIEFLLLGITNDPQQQRILFWAFLCMYLVTVAGNTLIFLAISSDPHLHTPMYFFLANLSFDDVCFTTNIIPRLLAGHVSGTETISYAYCLTQMYFLISFGNVDTFLLAAMALDRFVAICYPLQYHTIITPRLCVGLASVVWISSGLIALVHTLLMSRLTFCSSIPEISHFYCDAYLLMKLACSDTRINQLVFLGAVVFFVAPCILIVFSYVRIAMAVFQIPSAKGRHKAFSTCSSHLTVVILFYGTVLGIYIRPPDSFSTQDTVATIMFTVVTPMLNPFIYSLRNKDMKETVTRLLHRGSKSS", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZLG9-1", "protein_name": "N-terminal Ras-GEF domain-containing protein", "gene_name": "AABR07047293.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFSCCVWTTEGSGLKKDKNEGQGGTWKFMLLSCLQCLWPFAQKEIDLTRDNQAQDHEDQGEHEYAPQVVTEPCRESRISADMVENLVNRLVSSLQGGDPFFIPAFLYGYRQFTTTQHVLDRLLKRFAYFYLGCEEDEQIKSSLCCFLDTWIDQYPEEFSQTILKKLKTYLTVNMPSSDLNLRVHMLLKELRQESNESEGKDDDSVSLPVTLLYKTASAADLSSSVEVGSHTSGDLDIEVWFPSQKVQPEPAYPHETETPQSTIKVISWD", "length": 269 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZMT2-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3", "gene_name": "Ndufa3-ps1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGRSSDFFKNAQAKEPVLVVSFSVWGLAVILPMISPYIKYAGVISKATPYNCPVPVRDNGNVPGVPSQPQERLSPSLERLKNL", "length": 84 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNA3-1", "protein_name": "60S ribosomal protein L7a", "gene_name": "AABR07049918.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQETKNVVNPLFEKRSKNFGIGQDIQPKRDLTRFVKWPHYIRLQWQRAILYKQVKVPPAINQFLQALVRQTVTQLLKLAHKYRPETKQEKKQRLLAHAEKKAAGKGDVPTERPPVLRAGVNTVTTLVENKKAQLVVTAHDVDPIELVVFLPALCRKMGVPYCIIRGKARLGRLVHRKTCTTVAFTQVNSKDKGALAKLVEAIRTNYDDRYDEIRCHWGGNVLGPKSVARIAKLEKVKAKEFATKLG", "length": 266 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNR1-1", "protein_name": "Elongin-B", "gene_name": "Elobl9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVFLMIRRKKTTIFIEAQELTTVLELKRIVQGILKRPPEEQLLFKDDQLLDESKTLRDCGFTSRVAKAQDPATVGLVFREDASEGLQIHPYSTPLLPSVMKTGTDSLE", "length": 109 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZNU6-1", "protein_name": "Olfactory receptor", "gene_name": "Or5p66b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSWLENGNHTTVAEFLLLGLTDDPVLRVILFTIILCIYLVTVSGNLSTILLIRVSSQLHHPMYFFLSHLASVDIGYSSSVTPNMLVNFLVERNIISYLGCGIQLSLVAFFGAAECFLLAAMAYDRFMAICNPLLYSTKMSTQVCILLVVASYIGGFLNASFAMVSFCSFLFCGPNIINHFFCDFAPLIELSCSDVSVYVIATSFSAGSVTMITALVIAISYSYILITILKMHSTEGRQKAFSTCTSHLTAVTLFYGTVTFIYVMPKSSFSIDQNKIVSVFYLLVIPMLNPLIYSLRNNEIKSALKKQIWRKTVS", "length": 314 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZPU6-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC134485591", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAKEKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA", "length": 160 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQ96-1", "protein_name": "Large ribosomal subunit protein eL21", "gene_name": "LOC102550668", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAKEKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP", "length": 155 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQD9-1", "protein_name": "Developmental pluripotency-associated protein 3-like", "gene_name": "LOC120096627", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDKSSEKVDPVVNPETQMNDGSQREDEEDSPDDSEILQPETLVKVMKKLTLNPSAKPPKYHRHQRVRLRIKSQPVGNRSERIMREVQSAFPKTRVRTLLSVLKDPIARMRRFVRIEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN", "length": 158 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZQT0-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase", "gene_name": "AABR07071101.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MILCIKPSSTTKYCLNQCYLISCINKPNLLDGVNGIPLDIVAINDPFIDLNYVVYMFQYDSTHGKFNGTVKAENGKLVINGKPTTIFQERDLANIKWGDADAKYVMESTGIFTTMEKAGAHLKGGTKMVIISAPLADAPILKYDNSLKIVSNASYTTNCLAPLTKVIHDNFGIVEGLMTTVHTITATQKIVDGPSGKLWRGGHGAAQNINPETTGVAKAVGKVIPELNGKLTGIAFHVLTPNVSVVDLTCHLKKPAKYDDIKKVVKQASKGPLKGILGYTEDQVVSCDFNSNSHSSTFDARTGIALNDNFVKLISWCDNEYGYSNRVVDLMAYMASKE", "length": 338 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZTK7-1", "protein_name": "Uncharacterized protein", "gene_name": "AABR07012426.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSGDLEAKISGYTHISVQRFCYKWTISNFSFCMDGIRENITSPVFSLEGNEEVQWCLRIFPNGVDEESKDYLSVSLGLHSCPKSPVLAKVQFWIINAQGEKHQIKEIPNILSFSPKHQWGLRKFILREFLLSRRHGLLPEDQLILCCKVSVVGPSFSTPGHNMTPANKDPRQMLADDVGELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSHSMATELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLMADLHSTELLKTRVMDFIILHASEVSETLEWKSMVESHPHLVEEAFGSLASMHYFFLEPSLKR", "length": 359 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZV50-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEKKEK", "length": 195 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D3ZWL0-1", "protein_name": "Ribosomal protein L32 like 1", "gene_name": "Rpl32l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAALQPLVKLKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILKPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNLNARLRSAENE", "length": 135 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A176-1", "protein_name": "Golgi associated RAB2 interactor 5A", "gene_name": "Garin5a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPRLRTSARSPAPAVRMAISPSGPLGFTSPVTQPRREASPGVPTTQGRGVAMKGGRDLKPASGRADRPLAQAYAPCRPGRLQRHLLSGEFDQLRDFPIFESNFVQVTRFGEVANKVTMGVAASSPALELPDLLLLAGPDKENGHLQLLGLFPLQFVQLFVHDVSRQQLKVKFRTGRAFYLQLRAPPETRDCEFGRWVRLLYRLRFHSPTCAVPFTHEDTVPEESEDEDEVEEGQLQPPEVRAGPRAQGCWARKDGKGPVSCHRGQTRPAGLRTLGALIQPRSFQITKGPEIKPAQLRAREMDF", "length": 303 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4A9N2-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a77d", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQNNSVSEFILLGLTEDPAGQKTLFVVFLLIYIGTMVGNLLIVWTVIASPSLDSPMYFFLAYLSLIDALYSSTILPKLLIDLLCDKKTISLTACLVQLFVEHLFGGVEIFLLVFMAYDRYVAICKPLYYLTIMNQRVCVCLVVVSWIGAFAHALVQVFSVYKLPFCGPNIIDHFACDMYPLLGLACTDTYFLGLTVVGNNGAISVVVFMLLLLSYGIILNSLKTHSQEGRRKALSTCSSHIMVIVLFFVPCIFMYVRPVSNFPLDKFITVFYTVFTPMLNPLIYTLRNLEIKKSMEKLCRKIFTSDRIRISSCYS", "length": 316 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAM5-1", "protein_name": "Preferentially expressed antigen in melanoma-like", "gene_name": "Pramel", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVKTPNKLLELAIHSLLNEESAAIQALEEIPRELFVPLFIAAFEGGHKNVLSAMVKVWPYYCLHIGSLSIQEPQHELLKAMIENLPVYPAPSSSSRGPKLRILDLRQDTDCRITCPEVSTKTPSCFYSCAYSDRSITKIERQLCCVNAECKTLLPRPVELLVDLSLDGSLMEKEFLVLLMYKIEESLGSLHVCCRDLQIDKLCKCKCTLKFLDLKCIDQLSVDRGSLSDITSILCRMIHLESLSLSNVTFRSLSGKVFKIFLSHLQRMEHLKELSLSSFCLKNHLDRVLRILPPGLDFLYLPFCDLSYRDFKFMSQSPQVTHLKLLNLSNNPMYWGDFEPFHTVLINLSGTLQHLEINHCLISDSAMSALIPALIRCTRLRVLGFASNPISMPMLVNIMHNLTPMKELKYVIYPIPVHCYERWHFQGSLDRQKLAIVQLQLKAMLELAHREDMNWITYCE", "length": 461 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AAN9-1", "protein_name": "Similar to human chromosome 6 open reading frame 52", "gene_name": "C17h6orf52", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVETQSPGKECAVLPLWVLTVTSCPLPSAIREQLRVHHSLRCHRDNHYELLHSFYWLSCYSRGSTLSGNGLGPLCVTENPELLAGPWAIPEETTDPAENQEEDFLRDPNLHLNIEESDKEFMAVREELYDSLMNRRWHCLDTVLSNVPDELPQCEVF", "length": 157 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ABB6-1", "protein_name": "Olfactory receptor", "gene_name": "Or13a27c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "VNCIWHSKMVSPNQTVVTEFVLQGFSEHPSLRLFLTGCFMSLYTIALMGNIVIIALVTSSTGLHSPMYFFLCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICAPLHYSSRMSPQLCGALAMGVWSICAANASMHTGLMARLSFCGPKVITHFFCEIPPLLLLSCSPTYVNSIMTLIADAIYGGINFVLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVAMYYSSVFFAYISPGSSYNPERSKFTSVLYSVLSPTLNPLIYTLRNKDVKLALGRILASFSH", "length": 318 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4ADX2-1", "protein_name": "Olfactory receptor family 4 subfamily A member 80", "gene_name": "Or4a80", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGQSKIVTEFVLLGFTQDPAGQKALFVMFSLMYIATMVGNLLIVGTVIVSPSLGSPMYFFLASLSLMDAVYSTAISPKLIVDLLREKKTISFRACISQLFIEHLFGGVDIVILVAMAYDCYVAICKPLHYLIIMNRRVCILFLVMAWAGGFAHALFQVLAVYNLPFCGPNIIDHFGCDIYPLLLLACTDTYLIGLTIIANGGAMCIVIFILLLLSYAIILRSLQNHSQEGRHKALSTCSSHITVFFLFFVPCILMYVRPVSSFPIDKSITVIYTVVTPVLNPLIYTLRNSEMKNSMEKLLQKILSPNRLRLLCCLYY", "length": 317 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D4AEJ6-1", "protein_name": "Peroxisomal biogenesis factor 11 gamma", "gene_name": "Pex11g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLNGLASALESYRGRDRLVRGSVGPWRDRSDLEFGQDSEMRKTGQRGGPKGTDIGRLVSYMRTSYLSLPNCWPYKCVLALQIRTLGYGCQLIGGVLVEQCPSRSEVGRRLLVVSAQLSHCRTVLRLFDDLAMFVYTKQYGLGAEEEDVFIRWLSVLSNMADQLYYPCEHVAWAADAKVLQVDSARWWTLSTAFWSLSLLLGAVKSLWTMLKLRQKLRSPTGHFASQLPRSKWRAVEARIWSEALTLLSNLADLANAVHWLPPGVLWAGCFPPWLVGLMGTISSILSVYQAARAGKQAEVDSP", "length": 304 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "D6R901-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 21", "gene_name": "USP17L21", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEEDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSNRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "E0CXP6-1", "protein_name": "UMAP1-MVP12 associated (UMA) domain containing 1", "gene_name": "Umad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFHFFRKPAESKKPSGPEPEADGFVLLGATANEVRCKTSEAEGSQALETGKEDTSSVTVSGPETENQTGQTLQNNSLTAELLSDVPFTLAPHVLAAQGTISDLPDHVLSYDVGDNLSRFWYDFTLENSVLCDL", "length": 133 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E0CZF1-1", "protein_name": "PRAME like 34", "gene_name": "Pramel34", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGQTPPTHTLLTHEALIMSSLEELPTVVFPALFKEAFAGRHTNLLKAMVAAWPFPCLPVGPLMKKPNLETLQALLDGIDMRLTREFHPRRAKLQVLDMRNMYHAFWNIRADANDSDCKSKTLDEKQLVKVLPRYARRQRLKVIVNLSISSHFNKSKAYFLNWAKQRIGSLYFCCIKMRIWDPPDQVIRDIFNVFDPEHITELELNTDWTLLQLAHFASYFGHMKNLQKVFLAPLHKNTSPIINITNATEAKCVHKIISQFSQFNCLQHIFMKHVHFLRDYMNQVLGCLMTPLETLSITQCLISQRDFDLFSCSQNLFKLKHLEIRGMILYALDLMPLRVLLEKVADTLEILDFQWCRMKDSQINALLPALSQCTQLNQINFYNNDFSMCTLKALFQHTANWSKMNVEQYPAPLQCYSELGHVSVERFVQLCQELMYTLRAIRQPKSISFATDNCQKCGKPCVYDQGPILCSCFQ", "length": 475 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E1B8K9-1", "protein_name": "40S ribosomal protein S6", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKLNISFPATGCQKVIEVDDERKLRTFYEKRMATEVAADTLGEEWKGHVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKCKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPHRLGPKRASRIRKLFNLSKEDDVRQYVVRNSLNKDGKKPRTKAPKIQRLMTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK", "length": 249 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BBD9-1", "protein_name": "RNA polymerase II subunit A C-terminal domain phosphatase SSU72", "gene_name": "LOC112445820", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MPFLPLRLAVVCSSNQNRSMEAHNILSKRGFSILSFGTGTNMKLPGPARDRPNVYDFRAMYDDVYKDLLRKDKERYMQNGVLRMLERNMEKEMPRPERFQECKDLFDLILTCEERVYDQVVEDMNSGEQETCQPVHVINVNILDTNKEATLGAFLICDLCQCVQLMGDMEDRIGELLQAFEEKSGRSFLHTVCFY", "length": 195 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E1BLY1-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIIRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLSSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E7F638-1", "protein_name": "Moesin b", "gene_name": "msnb", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSINVRVTTMDAELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYQDSKGFSTWLKLNKRVTAQDVRKENPLLIKFRAKFYPEDVAEELIQEATQRLFFLQVKEAILNDDIYCPPETAVLLASYAVQMKHSDYNSEHHIPGYLCRDKLLPQRVLEQHKLTKEQWEQRIQVWHEQHKSMSREDAMIEYLKISQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYERSDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKSPDFVFYAPRLRINKRILALCMGNHDLYMRRRKPDTIEVQQMKAQAREEKNKRQQERALLENEKKRRENAEKETEKIARETMELMERLRQIEEQTKKAQEELEEQTKRALELERERKFAQEEAEKLEKDRRIAEDVKTALLQQSENQTKNKDNLATELAELTSKINLLEDAKKKKEDEARKWQRRAIMVEVDLEKTKEELKSKLIGVHIQATSQTENDHDENDESSAEASAELTSTGSFRDRSEEQRITETEKNEPLQKRLQALSSELADARDDSKKTANDLIHAENVRLGRDKYKTLRQIRQGNTKQRIDEFESM", "length": 577 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FA22-1", "protein_name": "Protein tyrosine phosphatase type IVA 3", "gene_name": "ptp4a3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAWLNGLYPVEVCYNSMRFVITHNPTNQTLDTFIEDLKRYDAKTVVRVCESTYDKTPLEKHGITVMDWPFDDGAPPPTKIVDDWISLLKKSFSEDPGCCVAVHCVAGLGRAPVLVAVALIEGGMKYEEAIHLIRLKRHGAFNSKQLTYLEKYRSKKRLRFKDPFKHRSKCWLM", "length": 173 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FE27-1", "protein_name": "Beta-1,4-N-acetylgalactosaminyltransferase", "gene_name": "b4galnt4b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRMRFPLKKIRKQFKLLLLLVLLMFAIGFTYLHINQGKAIKLHFNYGKDMERQAEGIGSSPKKHLSSSINPFEHGDAADSQEDGWGGEELNESAQESRANAEMHTLLAQKFLGLPWKPEYKGQANLHVFEDWCGSSVSQLRKNLHFPLYPHTRTTVKKIAVAPKWKNYGLRVFGFIHPYKDGDFQFAIASDDNSELWLSSDESPLNARLLVYVGQHGSEWTAPGEFSKFRSQTSKPVRLMSSRRYYFEVLHKQDDRGSDHVEVGWRPFLPGQKFDVIDSAYISLYTDESSLKMNSVHHIPQTLASHSLALQIYHRTETHTADMLKPDPRDTFYKIPMIDQSRLENVLPSCVYSPTYVVKDFPIARYQGLQFVYLSYVYPNDFTRLTHMEKTNKCFYRESPVYLEKFGFYKYMKMDEEEDDQPVFFPKPDDFLEEEEGVDPEEAINSSNRPVKRSGPSYQTSRITAATASSKPDRLDGGSKSSVFQQEKQYVQFKEQERSKKRTKGERFYRHSQVVDDEMTEIRQVKGSTGVLESQSGSLNEQTGPSEENGDSQTLSLVQRGRSLAWVLPDPALQSESKLIETASPTVKERSPFKLPHLYVLANRILGNAGKPVVEKESNSNKIYITRPRPPVSRPKPPVEVFPGVFLYQSRKSKRLVDLSSKWRSLKTQAAASAPWANFPLMDHKTSTQSALLKQSHLSSPTEPGPHNKGDPTASISDPDSVPPSSSEKRDHPGLNSSSQPPEEEPTKISEMAEGLDVAPQSRGLEEGEMSEYSYEEAEVRPHLAEEAINWQRTFSVNPVDFELLRSDWNDLRCNVSGNLQLAENEVIDVISQFMERLNERNRGIYTLARIVNVEKRRDSARGNRYLVELLLMEGGKRLVRLSEYIYLLLHRSRFEEGIESREGTVPSSHRTPSKIPLPSGSSAQTHTTTPWSTSWAKPLLCQPIMLQWRHDVMVHFVVPVKNQARWVQQFISDMELLHRETKDENFSVIIVDFQSDDMDVEQALKESTVPRYEYLKREGNFERSSGLQMGVDTIEDSHSIVFLCDLHIHFPHNILESIRKHCVEGRLAFAPIVMRLDCGSSPLEPDGFWEVNGFGLFGIYKSDFDKIGGMNTEEFKDHWGGEDWELLDRVLQNGLEVERLRLRNFYHYFHSKRGMWNVPVKRASQG", "length": 1167 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E7FFR8-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 5", "gene_name": "uqcc5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MLRKSQNLKYMLSLVPGKKRFGVYRFLPVFFCIGGVMEWIMINVRIGRETFYDVYRRKQSERAYQQKTEEGLIMLTDSQAK", "length": 81 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9PUW9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r143", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUZ0-1", "protein_name": "Apolipoprotein L 11b", "gene_name": "Apol11b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWNEISEDIRKVECRTFEKVIDNATEDLITDLRSLITEDGAWNGFVEAVELSSEEGEALRDALKERLAQDPTDENDRPQREQQKERFLREFPQLKKKLEDHIRKLRDLADKFDQVHKDCTISNVVSTSASAASGVLALLGLVLSTVTAGASLALSASSVALGATSSVSSFTTTVVEDSMTLSYESEARNLIGASMNVLEEILSIMPKITCKFYNTVADLVKAFKTLKGQIQTIRRARSISRRGAQARNLTSTGRSSGQGVSQMTRGARIRAGVFTSVFLGWDVYDLVTKQRICMMGEKQSQVEHCGTWLASWRRTFRNLSRSTMLCSQTCLSDALP", "length": 337 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PV04-1", "protein_name": "Eukaryotic initiation factor 4A-III", "gene_name": "Eif4a3l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATTTRMATSGSARKRLLKEDGMTKVEFETSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNLADLI", "length": 411 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVP9-1", "protein_name": "Predicted gene 4884", "gene_name": "Gm4884", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSENLQSSPFFGTESTLHPSLPLLSNSKQPAGTVCNFSRVSTPDVSSAWLLPSASSTSLQPLMVVQMETSLGLPPSGQTYCQLQSPELCNTCVQVSQIRPPAVNGDKALTAPIHSPSQFLALPPAPSLEQPENKTMPEIKEGTKENQDTPVLTLEHPDLQQPLHCTDTESLRQKPDSDNAHLGCICMGPKELVGLENEIGSSFDFKDITRFGADIQLPQLLNTLTDIDQDQSCENWRVTSGLFDQVRENKHKSFELLEGAPQAKFQHWDLVEGEGAVGVAGASDRAIDNMAKHPEGKAPKGPPSKNRRARKQEQERPSGPENKSKKTQELKQSRNRVKAEKEPSIPKTKRKRNPPELSQNSFKKPRTNLAMHMLESVQVFHPLGKKSEKKTGISSFRGLRTFTSNKDSGPGSVTTTVLNMPCESQGPPKSPGKVQSAESSVGKDCLSPSQYELPPAGKVKLVPLPFPTLDKPQSRPASRKPLSLALRRPTAVYPVQHHSHSVQPTTLRPAQPPPASSSLIASAKPAPPISSSATGPNVTNPNQSSAVPQLATSRPVPYRASSHTSFQRELVSAARNKVPSPPRPVPYRASSNTSFQRELVSAARNKVPSPPKPQTQYLLHDFSRQPIPWKKVDILGPVVSQPITKEQRPEREAMKRRSQQERENAVKNPSTGKLQIFLQRERDMEISQYYGYAM", "length": 694 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVW0-1", "protein_name": "Major urinary protein 8", "gene_name": "Mup8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCVGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIRVLENSLVLKVHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNAMDLVPEHVLVLTRQIAASRPENEEWPEPPVLSGDFSPGLHHHPFLSIQHPQYKFCDLHSILSH", "length": 235 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PVZ7-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKYFCLPRFSIISMLTGNGSFVTEFVLAGLTDRPELQLPLFYLFLIIYTVTVVGNLGLIILIGLNPHLYTPMYYFLFNLSFIDLCYSSVSSPKMLMNFVFEKNSISYEGCMTQLFFFLFFVISECYMLTSMAYDRYVAICNPLLYKVTMSPQVCSMLSFASYGMAFAGASAHTGCMLRLIFCNANVINFYLCDILPLLQLSCTSTYVNEVVVLIVVGINITVPSFTILISYVFILANILNIKSTQGRSKAFSTCSSHIMAISLFFGSGAFMYLNHSGSMNQGKISSVFYTNVVPMFNPLIYSLRNKDVKIALKKVMMRVHSRFIS", "length": 325 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW18-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r257", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPLSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PW59-1", "protein_name": "Olfactory receptor", "gene_name": "Or8b50", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALANGSFVTEFILLGLTDQPDLQMPLFLIFLIIYLITAFGNLTLIILIVLNSHLHTPMYFFLFNLSFIDLCYSSLITPKMLMNFVLEKNIISYMGCMTQFYFFGFFAISECYVLTAMAYDRYVAICNPLLYSVAMSPKMCSYFILGSYFMGFSGAMIHTGCVMRLTFCDGNTINHYFCDLLPLLQLSCTSTYVNEIELFIVTGKDIIVPTVIIFASYGFILSNILKIRSTSGRSKAFSTCSSHIIAVSMFFGSSAFMYLKPSSAVSMNEAKFSSIFYSIVVPMMNPLIYSLRNKDVKVGLKKTLSRMFSHNLISL", "length": 316 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXC3-1", "protein_name": "Cytochrome P450, family 2, subfamily c, polypeptide 69", "gene_name": "Cyp2c69", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPFVVLVLCLSFMLLLSLWRQRSARRNLPPGPTPLPIIGNYHLIDMKDIGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHGEVFSGRGSFPFFDKVSKGKGIGFSHGNVWKATRVFTVNTLRNLAMGKRTIENKVQEEAQWLMKELKKTNGSPCDPQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGKVNECTEILSSPGCQIFNAVPILIDYCPGRHNKFFKNHTWIKSYLLEKIKEHEESLDVTNPRDFIDYFLIQRRQDKGIEHMEYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRKHMPYTNAMVHEVQRYVDLGPTSLVHEVTCDTKFRNYFIPKGTQVMTSLSSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDYFVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDTTPKYSGFSKIPPKFQMCFIPVE", "length": 491 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9PXM9-1", "protein_name": "F-box and WD-40 domain protein 24", "gene_name": "Fbxw24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLSSFPMMEIFSYLDAYSLLQVAQVNKNWNALASNDFLWRKLCQERWLFCDMVTLQLLGKETWKQFFVYRTWQEHVKSRAIPEDFTYKEIPLECGVRGYAGYISGCALTRNGQGKSVVCMVSSKNKISTWDISESVITWVSPVQPASIKLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLAGDILGNLYIFRIPDLHLISTVNVFPCGFDKIDCSPQKKWVLLSQNHPCIYPKVFYMSSLLRTSEFSDPVSTVLEFSLCKRAFWTPRREDRITLMSRRGRPIVTRFETFDMKLEENGNKTIVKGDLVASFSLQDYNENPKWMGVSDKSVIVCSTGSSLLLFSMKGLHLQTFQYSPEMIVRLWVDPVHVIITCNDGSIDVYMWEERSLLLKMCYRLQNGRHLPPFGFIKNLLCDDVSIVQLMIDRQGPCFLMAYTLNICS", "length": 466 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q069-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r157", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCHFEVGTVANVFLFVHNFSPVLTGYKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q0V3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r68", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGVAIIKENQTQSKMDFWNMGIKILFLSQTTTGILGNFSLIIYYVVNYIVHTLKPTDLILMHLMTSNALMVLSTGVLHTMAAFGLAHLLNDLGCRLILYIQRVGRSTSIGTICLLSIFQAITISHRVSCYKGQKIKSSKYIGYSISLLWVLHMFLNFILFVDIFIKRNRNNMTSDRDFKYYSIVERNEFSDSLYVALVVCPEIFSSVLITCSSGSMIGILYRHKQRVQHIRSFHVSSRNSPEWRATQNILVLVSTFLAFYTLSSVLQGCIALLNNPNWWLVNITRLTSLCFPTFAPCVLMSHYSFMPRFSLVWTWNKTS", "length": 319 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1C7-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A2", "gene_name": "Speer4a2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWMGETREGRKDADLPSKSNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHNLEMENMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIHQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 252 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q1N7-1", "protein_name": "Predicted gene 8126", "gene_name": "Gm8126", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNRNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKITQSINDTIEKYKEFIEDKDSYSFMHTYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEENRFCHESSKNIHPKY", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q328-1", "protein_name": "RIKEN cDNA 5430401F13 gene", "gene_name": "5430401F13Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASSRILLVLLSIALLALTSAQRVNEDDGSALQEEDALEIGDSNQQHDDIHERLNEIKNHFQDQISQHGKEAIKSKKGKNGPRSRRSSDDDNLEVQDHQSGNEQAGGGQGGRGRSELKGQNGKGSQKGKKGKGGQQEQKGKGGQQKQKGKGGQKTKRGKGGQRSQQDNVQEVYQE", "length": 175 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q346-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r160", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSKLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q366-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4f2", "gene_name": "Speer4f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTMCVRLRRLFQRANVDGRETREGSMDAGLPCERNEGRRRWTWRMWMAHRQTSSPVPVTSNQFEKEEEELMEEIQLISQEKNGLRDYLNLTLGSKITRLNQSYEELKLKQKELMTLQHDLEMATMEAREENEELKKEINFYSNLHSRALMENNLIKKKLMTLQQESKEVQAEWASIQQHLDVNLSGKDEQENNSILDTQEHQVSETARELGLATDQEDSILQDELPPQEAPAEELSPQEAPAEELPPQEAPAEQLPPQEGPAEELPPQESPAEHHLQHPQSFSDESSYITYPEWE", "length": 295 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q3G0-1", "protein_name": "Zinc finger and SCAN domain containing 4B", "gene_name": "Zscan4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPIPDNAQMPVDTTQDRLLATGQENSENECNTSCNATEVNVGESCSGNEKDSLLITQKEQNHEHEEGNVVCQFPRGARRASQDTSSHHVDFPSALTPADVPMEEQPMDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKTDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQPISDPVLGKNHEANLPCESHQKRFHRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCITCQKIFKRVSDLRTHEIIHMSEKPFKCSTCEKSFSHKTNLKYHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 505 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q4E0-1", "protein_name": "RIKEN cDNA 5031410I06 gene", "gene_name": "5031410I06Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTFLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPSSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q501-1", "protein_name": "Predicted gene 2237", "gene_name": "Gm2237", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENVDEGETRPTEKEEGILSHEKGRRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSPAESRTWH", "length": 211 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q5G7-1", "protein_name": "Oogenesin-1", "gene_name": "Oog1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGYIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSAGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFSLGDSEKLDEETIFSLISQLPTLHCLQKLYVNDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPYCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELDSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPLECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVELL", "length": 496 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q6D7-1", "protein_name": "RIKEN cDNA 1700024B05 gene", "gene_name": "1700024B05Rik", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESHDNPVSAGRTSSQNCNITNHMKNMNKLDDMKFYIRKINAELEELFRILDIDMNTDLNYRMNTEFTIIKSQHEKTMLDMEKMKQSISDSIDKYKEFIEDNDSYSIRHTHLLKECNQLKEKVRMLLNENRKLLVEQADQEASFGEEKSSVMRPARTYIPSAKQQQL", "length": 167 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q7M8-1", "protein_name": "Predicted gene 5796", "gene_name": "Gm5796", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQSGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8A4-1", "protein_name": "F-box and WD-40 domain protein 28", "gene_name": "Fbxw28", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSVPMMEILSYLDAYSLLQAAQVNKNWNELASSDVLWRKLCQKRWLYCYMFTLPLHGLETWKQFFFDKTWQEHAKTRAKPEDFTYKEFPVEFEFRAHPWYISRHGLTRNGQEKSAVCMTSMNRISTWDIHEGAMTWESPKQPSYIVWMTTLPEMQIAVTIDMQSTIKLWDCHNKEVLASKTGLFFGCKLLQSEFTKDGPIVLVGDACGNLYIFRIPDLHLISKVNVFPYSIDELYFSPQKKWVFLIGHRLNDLTKVFYMSSLLRPSEFSAPVSTVLKVPVIRKVFWTPRREDRITLMSLILPKNITKFDTFDMKLEGIGNKVTIQGYLTASFSLAEDEGRPDYFGVSDKDVIVCSTRFSLLLFDINGLRLQTFHYCPEEIWRLWVDPVHVIVTCDAGSLDIYAWEKRSLLLRKCYRLRNRNYQQMSGYIIKTLCDDMSIISVANNSPKPCCLMAYTLSVCS", "length": 466 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8I6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r55", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDLVPKNPPTDLKCKLAHFFHMVARGTNMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVRYSCYSCWLFSVLNNAYIPMNVRGPKKSHNDSDSQGKRMCSISVVNVDMNYLQFSYDIIFIGIMVWTSVSMVIHLNRHHQRMHYIHNPNQSNRGHAETRAAHTILMLVVTFVSLYILNCICVLFHVSFVESRRWLRNVIEFLALSFPTISPLLLIFRDPRGPCSLYFNVGLEIHVTGKVITEEQ", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8L6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r132", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFFSVLSNIHIPIKVTGPQIIDNNTYDKSNLFCSTSGFIVGIVFLQISHDATFMSIMVWTSVSMVLLLLTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPNDPCSVLFKC", "length": 297 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8T0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQTGLGVLANTVLLFFYVFIILGHRPKPTDLISCQLSFVHIMVVLIGGDILLADIFESLNIGNDFKCKTTFYLFRVMRGLSICITCLLSVFQAVTISPNTSVLAKFKQKVKKYMTHVFLCIWFFNLSFSTNQIFYVGGFTNVSETNQMQVTKSCSLLPMNYIIRGLIFTISISRDVFLVGVMLTTSVYMVIFLFRHQRQCKHLHSFSHPRESPEKRATQTIMLLVSFFVVLYWMDFIISFTSEMLRMYDPVILTLQKFMMYAYPTITPLVQISSDNRIIIMLKNIQSKCHPSFSLKDFFFFI", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q8V7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r173", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSALNKALKTTEEVALQIILLCQVGIAAVANILLLVHNLSPNFAGPQLRPKHVILAHITVGNLLIILLTGFPSNIIVFVPRNPLNDLNCKLEYFIRLVARSANMCTTCVLSTYQFIVLVPGKWSRMILRGNTSTFVHYSCNSCWIISVLNNVYIPIKISGPWNTDNDTDLNSKWVCSMSGFELVMVFLRFVHDTMFISIMVWTSVSMMLLLYRHHQSLKHIHRSNGSLGLQPEARAAYTILMLVVTFVCFYLLDCMCIFFHISFVHFRVWLRHVNEILAASFPTLSPLMLIFRGPKKISAKGINTENAFINSH", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9Q9N3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r152", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFASKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFGSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHRQQMQHILTPNQDARGQAETRATHTILMLVVTFVRFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QAN3-1", "protein_name": "Predicted gene 1979", "gene_name": "Gm1979", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRETREGRKDADLPPESNEGRRRWTWRMWMAHRQKTSPVPVTSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHELEMKNMEARENKQELKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "E9QD93-1", "protein_name": "Granzyme K", "gene_name": "gzma", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MDICRNLIVFHFLVFTFFKVTVCSDVSIVGGKDVKKALSWMVSIQVNQNHKCGGILIHKEWVLTAAHCKEDSYSSVTVLIGSLSLSKGSQRIAIHNYEIPETFNKKTKKDDIMLIRLSKKVKAKPYKIPKKEKDVQPGTKCVVRGWGTTDYKGKQASDKLQMLEVLVVDRVQCNRYYNRNPVITKDMLCAGNTQQHRGTCLGDSGGPLECEKNLVGVLSGSHGCGDPKKPTVYTLLSKRHITWINKILKQQFNSTRF", "length": 257 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E9QLQ1-1", "protein_name": "Defensin, alpha, 35", "gene_name": "Defa35", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHDELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F1LPT0-1", "protein_name": "Gap junction protein", "gene_name": "Gjc3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCCSFLRQLLARESQHSTPVGRFLLPVLVGFRLLILVSSGPGVFGNDENEFMCHLGQPGCKTICYDVFRPLSPLRFWAFQVILMAVPSAIYVAFTLYHVIGYWEVPGRNKEQEAQICKGGRCKDVSGAMSLKLLWAYVAHLGVRLVLEGAALGVQYHLYGFKMPSTFICREDPCIGSTTCFQSHPSEKTILLNTMFGISGACLLFIFLELVLLGLGRVWKTYRHKLPLFKNLSTSERSVRHKDTTDDLSVVETKEPF", "length": 257 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LT33-1", "protein_name": "Cytochrome P450", "gene_name": "Cyp2b14", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVFLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFIDTYLLHMEKEKSNHHTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVISSHRLPTLDDRIKMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDANGTLKKSEAFLPFSTGKRTCLGEGIARNELFIFFTALLQNFSLASPVAPEDIDLTPINSGAGKIPSPYQINFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1LYQ4-1", "protein_name": "Alpha-1-B glycoprotein like 1", "gene_name": "A1bgl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLLVLLEPLASLTLTCKVCEPSKDLHRILHLSSMETACTLSLALPPTLPSASLIFSASGVHTLILLRVRLNHSLILLSLIHTGPLPRPWLSANPVPWITPGLRTFLLCQGTVRDVVFMLRREGDDGNKEKEQGIFQVHEPGNYSCNYYTNTEYTPSKPSGTVTIKEYVIPPPPMLTSLESSTVDEPEMTQMSLLCVAPLSDVEFQLRQGEREMKVLIVSTSPERASFYLKLSDMGDHSPFTCRYRLNRMTAWSEDSKPVQLMWSDETLPEPVLTVEPSPHQSFEPGSTVQFRCTAPKAGLRSEAGLRFGLHLEDLYDHRLLQTQKSSGNETVFQLRNVSATDSASYSCIYTELTPPYSGSAPSDFVILRVNGPPPPPKLQALWTGKVFAGHDVVLRCQSDVTGVIVELLRDGKFVPYRILRVLNNYSDLGLHSVGPQHTGNYTCRYTSWLPEPVQSEPSNPVELLVEGMASGVVVVGFCLLIFPGLCILVNCAI", "length": 495 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M6N1-1", "protein_name": "Zinc finger protein 945 like 1", "gene_name": "Zfp945l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTASLVNVSKCLLTFRDVAVEFSMEEWECLNYSQKTLYRDVMMENYNNLLFVENHCKYKKVLDQDPNSIVHNVNIYEKAYECNELVKMTHESSQGTPFKTKHKDASLQISTLNRQKIGNTRDEPCKFKDCINFLNVFVIRQNQRIYIGEKEPTTIEYENHYNSKHEVMLKQSNSTGNKPHIFRKYGQCFKIYSSFSRYQNDHTSEKFYKCIKCRKSFLHLSQLKVHYKIHYRKYPCKCTACSKCFYHTFGFKRHYSIHPEVNTYKSSDCDKSFIYYSSLRKHQKIFGGERHYECNEGLRSLYTVFQPVYYYIPHIGEKAYKCSECEKCFTRKYHLTVHQRIHTGEKPYKCGECDKCFTRKYHLTDHQRIHTGEKPYKCSECKKCFTRKYHLTDHQRIHTVEKPYKCSECGMSFMKKYHLRSHQSIHTGEKPYNCSECDKGFTYKGHLRRHQKIHTGEKPYKCSECAKCFTENSKLRRHQRIHTGENLYKCSECDRCFIENNKLRSHQKVHIGEKPYKYSEYDKCLTQKGSLRSHQLIHTGEKPY", "length": 544 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M7A9-1", "protein_name": "Large ribosomal subunit protein uL6", "gene_name": "AABR07026048.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MANRLAHRPIQWRNFLSQDSLDQDTMRKKTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYVSEKGTVQQADE", "length": 219 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1M9J5-1", "protein_name": "Uncharacterized protein", "gene_name": "Esp1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "ITFLPVTLFLIILLWPSMITEGRVLTQNQKELSISADHNKNHKSDLDKIEFQGQPNIQKAVEMTICASDKDQTLLEDQANANQDKQLYKDSHLLCGRSLDHIVK", "length": 104 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1MAE5-1", "protein_name": "Proline rich protein 2-like 1", "gene_name": "Prp2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPLHFGARRLLFTWQLLWLLAPASPIPEFTGNPVQLTSEPWVPTKLWSWHPSDHSRKAAHTRISKTDAGGVDYLGSSVSSEVLSPLEELTDSLLPFQDPSTFQELKPESEELIVPHKDLTNKLIPTGEQPEDNLMLNGDQNQALTLPSEFKSTTSLVGAADHQLYEIPVPPLDSQSSKATTFIVSPKELKDLAQHKKLAKVVVGKPQFQNQIRDDYYEDLNINEPHSYNLPLQSQENAEEAPEHFEQVELYQMETQTRNPENSQQEAPDYFPQSPEEDEPLIQKEDPAHYQHHYTLPTITGKPVDIKLKITSEPIKVESSLYEEETPTQTPGPFVEAKLFPSQQQQPAETSETPEEGESSGIDLESSVHPQEDSEEIGPLPTLQEDLSQHLGPVLEDESSLSELEQPVQLFESSEEVGSGSENQPEASVQPTVLPLVEQEILFGAPGSSIETVIETLPIHEIQPTQNEDYGYQLPNVTVRPVDVALTVTSEPVKETESFLAPQEFPVHALEYSNDVEPFVNEEEPPVQAPETPGESQFESQLEVPAQATEYDEEFKTSATEQEQLAQFPENDEVTVLPSNHYQAQHSILSNVTDQPLDLDITITEKPMEMGTSPVYYDAAAAPEEVEFLSDQQGVLSQSLEPILYDRLSQQEYTTGISQISEGGEPFPTQQETPEHSVGMHTEEVAQPPGHHEVTGPPLGHGQVHSPALQNILTQYSTFPEKDQHSPVGLGVPGHLEEFSVEPSPSQQENSAWHSVTDMFLSPVDLQTIFRSTQSKSYKTTIKHEDLALTITPEPSLEDGSILFPQEDLLQPIDSTGQGEFSHIKTSTLSKPPYVSNTKSSAFQETMSETTYNSKQVDLSSTHLKTSELPPDYTMGLEPSLYQQITQSSPKSLHENPKSFPVLKPSAAQALKPPRKEKLSPTNNMIPHHPSKPLKNMVTHIPAHKMTVPRQIQEDQGEYTISSNGSFQPLDLEVTLTSGIIPEVKHILPKRTVNPQTYSQVKISHSQHVETQHPNSETTTVQPLDLEFAINLQPTPKENFAQTFQDTTTQMIGPPKEVIAQAPEHHEGTIPIPIQDQAEYSTLPTVSFQPLDQELTITSEAIREPPHPTVPQQTIIVHPPEHPLVIHSEQVYTQHPNPTEAIIQPLDLELTITPQPTAEGELPQTLQDSTTQIIEPPTVVVGPVPIYEEVTVQTTSQDQAEYPPSPTVSFQSLDLELTISPEATRESYHPSVLQQTTIVNPPEHPLVIHSEQVHTQHPNLTEATVQPLDPDLTITPQPTTEGELPQTLQDSTSQIIIEPPIKVVALVPVYQEVSQDQAEYTTSSTVSFQPLDQELTITSEAIREPHHPTVPQQTITVHPTKHPLVIHSEQTQHPNPTEVTVQPLDLELTMTPQPTAEGELPQTLQDSTTQIIEPPTVVVGPVPIYEEVTVQTTSQDQAEYPPSPTVSFQSLDLGLTITPEPTEHFITQKTTVFPPMYTDVTLPQQVSVQHLKPTEGIVQPLDLELTITPQPTPEGELSQTVQESTTQNKEPHKEVVAPVPVYQAVTVPTPSQYQAEYQKSLQPLDLELTVTSEPTKEAYHSTISKNSLAINPQYVHIQHPNPAEATVQPLDLELTISSSLQPTAEGELLYSMQETVTQISEPPKQVVTPVPEYQEVAVPAPVQDQAKYPLSSIVSLNSLDQELTLSSELLGEAHQLTTPDETMVLPPKDRQGIYPDHDHHKHLNLTEVTNQPFHLEHTVQHQPTIEEERSQSIQKKTTQITEPGKKVVPLAQESEEVTIPMPILKETAFPTPHSMALQSLDEKLTIHSQSPGWTQQHANLKESKGHTTGKILLDYAEPNMEIELKHHGLFLLKTTEATTESENTNQMTKSLKQVTAQNTQNKKSMLPALVESQDESQPPPNMSLQPLDQELTLSSQPHGWVPHIPNTPEKIYLHYAEPPTGPFVEPPDLFFLKTTKSRPVQGTATQMAASPKEMVSRAPENKEAVLSGPGEDQDESPSPPNMSLQSLDQELTLSSQPHGWIPHPPNTHGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVEWTLTRTDKSRKEMVSQSPKYEEAVLPVHGEGQEESRSPPNMSLQSLEQELTLSSQPHGWVPHPPNTHGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVEWTLTRTDKSRKEMVSQSPKYEEAVLPVHGEGQEESRSPPNMSLQSLEQELTLSSQPHGWVPHPPNTHGKIYLHYAEPPTGPFVEPPDLFFLRTTKSKPVQGTATRMVKSPEEMVSLDPENKEAVFPAQGEGKGESPSSPNMSLQSLDHELFMSSQPHGWIPHPPKTPDKIYLHYAEPPTGPFVEPPDLFFLRTTKSKPVQGTTTEMAKSPKEMVSQTPEYKEAVLSGPGEDQDESPSPPNTSLKSLDQEVAMSSQPHSGVPHPPKTPGKIYLHSIEPPPGPFVKPTDLILVKTTTKSKPAEWTPRRIDKLLKEMVPHSPEYEEAVFPAHGEGQDESGSPPNMPLQPLDQELTLSSQPHGWVPHHPNTPGKIYLHYAEPPTGPFVEPPDLFFLRTTKSKPVQGSPKEIAKSPKEMVSQTPEYKEAVLSGPGEDQDESPSPPNMSLKSLDQEVTMSSQPHSGVPHPPKTPGKIYLHSIEPPPGPFVKPTDLILVKTTTKSKPAEWTPRRIDKLLKEMVPHSPEYEEAVFPAHGEGQDESGSPPNMPLQPLDQELTLSSQPHGWVPHHPNTPGKIYLHYAEPPTGPFVEPPDLFFLRTPKSKPVQGTPTQMAKSPEEMVSLSPKNKETVFPAQGKGQDESPSPPNISLQSLDQEITMSSQPHGWIPHPPNTHGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPMQGSPRQIDKSPKEMFTQSPEYEESVLPAHAEGQEESRAPPHFSLQPLDQELSLSSHPHGWIPHHPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGTATKTDKSPEDRVSQTPEYKEAVLSGPGEDQDESPSPPNMSLQSLDQELAISSQPHGWIPHSPNAPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPLQGTPTQMAKSPKEMVSQTPEYKEADLSAPGENRDESPSSPNMSLHPLDQELSLSSQPHGWIPHPPNTHGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGSPSQIDKSPKEVFSQSPESEESVLPAQAEGQEESRAPPHMSLQLLDQKLTLSSHPHGWIPHHPNTPGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGSPRQVDKSPKEMFTQSPEYEESVLPAQAEGQEESRAPPHMSLQPLDQDLTLSSHPHGWITHHPNTPDKIYLHYAEPPTGPFVEPPDLFFLRTTKSKPAQWTPTQMAKSPEEMVSLSPENKETVFPAQGKGQEESISPPHMSLQPLDQDLTPSSHPHGWIPHHPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQVSPRQIDKSPKEVFTQSPEYEESVLPAQAEGQEESRAPPHMSLQPLDQDLTLSSHPHGWITHHPNTHGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVHGSPRQIDKSHKEMFTQSPEYEESVLPAQAEGQEESRAPPHMSLQPLDQDLTLSSHPHGWIPHHPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGSPRQIDKSPKEVFTQSPEYEESVLPAQAEDQEESRAPPHMSLQPLDQDLTLSSHPHGWIPHHPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPLQGSPRQIDKSPKEVFTQSPEYEESVLPAQAEDQEESRAPPHMSLQPLDQDLTLSSHPHGWITHHPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVHGSPRQIDKSPKEVFTQSPEYEESVLPAQAEDQEESRAPPHMSLQPLDQDLTLSSHPHGWITHHPNTHGKIYLHYAEPPTGPFVEPPDLFFLRTTKSKPVQWTPTQIDKSREEMVSQSPENEEADIPRHGDGQDELRNPPIISLQPLDQELTLSSQPHGWVPHPPNTPDKIYLHYAEPPTGPFVEPPDLFFLRTTKSKPVQGTPTQLAKSPKEMVFQTPEYKEAVLSAPGEDQDETPSSPNMSLQSLDQELTMSSQPHGWLPHPPNTHGKIYLHYADPPTGPFVEPPDLFFLKTTKSKPVQGTVTQMDKSPKQGLLPAHGEAQDESRSPPNMSLQPVDQELSLSSQPHGWITHPPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPLLGSPTQMAKSPKEMFSQTLEHKEAVLSAPGEDQDESPSSSNMSLQSLDQDITLSPQQYGRIPHPVTSPGKIYLHYVEHPTVPLFQHPNMFSTKTTTSKPLQLTQTQMAKSPEEIVSLRPEYKEAILPAQVESQEESVFLPNMSLQSLDQELTLSSQPHGWIPHHPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQWTPTQIDKSLKKMVAQSPEYEEAVFPAHGEGQDESRYAPNISLQSLDHDITLSSQPHGWIPHPPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPAQWTPTPMAKSPEEMVSLSLKNKEAVLPAQGKDEEESISPPNMSLQPLDQELTLSSQPHGWVHHPPNTHGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGTITQMVKSPKQGLLPAHGEAQDESRSPPNMSLQPVDQELSLSSQPHGWITHPPNTPDKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPLLGTPTQMAKSPKEMVSQTPEYKEAVLSGEDLDESTSSPNMSLQPLDQELSLSSQPHGRIPHPVTSPGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGTATQMAKSPEEMVSLSLENKEAVLPAQGDGLEESIFPPNMSLQPLDHELILSSQPHGWITHPPNTPSNIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGSPTLIAKSPREMVSRSPEYKQALLPGHGEGKNESRSAPNMSLQPLDQELTMSSQPYGWIPHPPNTPGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQWTSAEIAKLPKEIVSQTQKHKESVLRAPVEQHNKSPSPPNVSLQPLDQELSLFSQPHGWIPHSPNTPGKIYLHYAEPPNGPFVEPPDLFFLKTTKSKPVQGTPTYMTKSPQEIVSQSPEGMEAGPPTKVEVQDESPSSPHASLQTLDQELTLSSQPHGWIPHPPNTAGKIYLHYAEPPTGPFVEPPDLFFLKTTKSKPVQGTATQSTQSPKEIISPSTRYKESVLTAAVVGQDESQSPPNISLQPLDQELTLSSQPHVLISHPSSTNANTGHTLGKIYMHYAEPPKGMLVEPPDLFFLKTKILNRPVLETPTQIPKSAKEVVAHTVESEKGVLQVPIKGQAESPPPPNMSLQPLIQELTTFSQSPSWTDHPPNSKETKNYTPGKIYLHFADPPMGLVVEPPDLFFLKTTKSKLVQGNPTQIKKSPKEVAAHTVEYKEAVLPAPLEGQDKSPIPPTMSLQSLDEELITPSHSPGGTHHSPTPIETKRHMSGKIFLNHAELPMRMVVEPLDLFFLKTTESKPVQEIPIQITKSPKKVVAPSVEYKQWVLPAPVDGQDDSPTPPNVSLLPLDQEISISSPPGRAQQPPNPKESKEHEPEVVFFQHPHPSVGMVVEPLDLFFLKTTESKPVQESLAQNTESPKEVVVQTLEYKEVVVSSLIEGNDKYLTPSVPYQPLNLELFESSGSTTEAHHSTTFNETTVPSSIHQVVSPLLHSEFSVTQQPNTMVKRSARMKETPTQTSEIPMETVTQSVEYYSSTSVYVDTQHSNLSALETAQSDVLTTIASFPKTAHPEVPRTIASYPEASLCEVPTTTVLYPVATHFGVSTTITASPEFAHSKAPGTTAPTPKCITGLPPDQAERHPSSTAVTVQVLKMESTITPYSENSNTENDLSIEKNAYNYTNICDFCLCENETLLCVHPNPIWRLQQVPVPRPSTYNDTFAILNFKGNDISYIDKNVWKVYRWTEKLILSENHLTELHKDSFEGLLSLQVLDLSCNKIRYIERGTFESLPFLKYMNLGCNLLTELSFGTFQAWHGMQFLQQLILSRNPLTVVEDPYFFKLPALKYLDLGTTQVQLTTVENILMKTLELQHLILPSHMACCLCKFKADIEVVCKTVKVHCNTGCLTNTTHCLEEASIRNPEGTFMKVLQARKGNTSTELTIEPEKDSSDYANESTSMEEKIDFGDEKDVMSALNYILPYFSEGNMEDVMSSMLPYIKLLFSHEQDAGNSLGSSQKDTESAPVTSGSKSGNVTYKNKLNKLYFLENLLDTEIDEVQKEEKPGRHKAKSKKLGPKLKRGIFEKRWEPAQADEDSLAEIEKAERRLLSMSRAPEGTGSLRKRHFKEVRVKSLGSKQSAQTPVENSAKDRQLGSPASVELQQLHLEQKPRALVGNSFPSEPLLAKDHGKELSSSLGPALVDKAPAPKSLPEFLDRRKDLSYTIFVLESANANVKRAKGSNPNLQPEERRGNLRKKKSHFQLITKRPAAASSAARSLVNSPAQGIFSSLGDLSYPEGPFSESYTASELSTEIPLEDQAATDNVEENILEPVATMPEETASEITATENPDADSNVLIASVPDLIPTVQQTSEPELHFIFRSDSPHNFKEFAYPSPMSPEEQFESHLNQQLGTLIPNNDVRKLISHVIRTLKMDCSDPQVQLSCAKLISRTGLLMKLLSEQQDFKLSRTDWDTDQWKTETYVNQSRGAQGERKGLEPDQRAKEASGFGYNKKVILAISVTVVVIILIIAFCLIEVYSHRTKKGDEEKPMWSEKNYRQTKSEEKIIWLRWPLWLRNILKQDTSKKSGYELQGDTSLAEKTDVQDESWEVDKEGPVEPKDTEEEAPETLEDAK", "length": 6882 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F1QDL3-1", "protein_name": "Novel nacht domain containing protein", "gene_name": "LOC560232", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MEDKHTPGDLDLSTGCSSVHQNRAEAEPSCVSMKSDVSMDPPTNFKSGNTGPAVSSRKRKRAEAEPSCVSMKSDASMDPPLKFKSKNTQPAVSVDRDDQSGDLLQDSLQPEHDELQRVKEQHKTTMKNKHERLFEGINHGETQTLLNRIYTQLYIIEGESEGVNEEHEVIQMEKRARTKPSQHTPVYCNDIFKASAGAGHEVKIKKEKAQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELEDLEPKIYEQCRVVFIFDGLDESRITLNFSDEEKVCAVTESSSVAVLMWSLLKGDLLPSALIWITSRPAAAHQIPSRYIKRLTEIQGFTEPQKEEYFRKRISDEHQASRIISHIRRARSLQIMCHIPVFCWISSTVLQKLLEEDVSAEIPQTLTEMYIHFLLIQINMRKQKYEERDPEKLLQSNRGVILKLAEVAFRQLMKGNVMFYEEDLIESGIDVTDALVYSGICTEIFKEESVIQQRKVYSFIHLSFQEFLAAFFVFYCHLTKKRELLELILGYSYDQYLQSSSEKSLYDLLSSAVDEAVRSSNGHLDLFLRFLLGVSLESNQRLFQDLLTHTEESSESIRRITQYIKDQIKSDDYFKRAAERFINLFLCLLEVKDQTLAREIQEFVKSDKHSEEELSPAHCSTISYMIEMSEEPLDEFELQKFNTSAEGRLRLTTAVRNCRRAL", "length": 725 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QGM0-1", "protein_name": "Galectin", "gene_name": "lgals1l1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPTVLIQNMAFKVGQTLTLTGVPKPESPEFTIDIGNSSEDIALHINPRFDAHGDQCIIVCNTFQNDCWCEEHRDENFPFVQGEEFQIKITFTNEEFLVTLPDGSEINFPNRQGSEKYKYMNFTGQARIQGIEIK", "length": 134 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QMQ9-1", "protein_name": "Uncharacterized protein LOC541480", "gene_name": "si:ch1073-398c20.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MADIKQESDDIRIAEVFTLKQEDPEEQTDLLPLRKEFQGLDNVKEEEALVEEHQDITPAEKRITCSETENTTQKASEKTGSRSSFTCEQCGRDFAKQGTLNNHMRIHTGEKSFTCQQCGKGFTQKRTLRNHIRFHIEAESLSCQQCGESFTQKQDLTDHMRVHTGEKSFVCDQCGKVFLRKDGLEKHLKNHHKEKPHVCPCGKSFTDKTKLEEHTKTHTGEKPHTCDKCDECFSGKYDLIRHMRFHSAETPYICQQCGKSFALKRVLMTHVKIHTRDRPFLCKQCGKCFYRKDNFNRHVRVHTGEKPYACSECGKSFSERFQFNEHSRTHSGVKRFSCEQCGRGFNRKTELKRHMRVHTGEKPYMCPQCGKTYAFKTGFDIHMLHHNAEMPYICPQCGERFSVKQRFDVHMKIHAGNSDK", "length": 420 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1R1Q6-1", "protein_name": "Uncharacterized protein LOC641576", "gene_name": "zgc:152710", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MVLIWTQFGVKHKNVKCKVRVIHGEEGSWSSEEVREEPEVSSPPPSPECVDYYSVLGVSNDSNEEEIRKAYKRLALRYHPDKNSDADAEDKFKQIAQAYDVLTDPEKRNIYDQQGLTKGGVAPTCNKTDPSHNSKADAHSWHMFFNFDLDSDDDLFNPFTRNPLPHLSRHHGNKGGLKPAGDAEVHDLSVSLEDILMGVTKRVKLTRLRQTDKHTLKPEERVFDVEVKKGWKEGTRITFPNEGHQMLGHAPNDLAFVIKEKKHAHFRRDGSHIVYTCTITLREALCGCTVNVPTLDGQMKPLPCSDVIKPSSVRRLIGEGLPRAKNPAQRGDLLVEFQVVFPDRIPPSSKEIIKHSLGQC", "length": 360 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RA39-5", "protein_name": "[F-actin]-monooxygenase mical2b", "gene_name": "mical2b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MGETEEERTSQAGQLFENFIQATTCKGTLQAFSVLCRQLELNPSDHRGFYSSLKTAVTFWKAKGLWGKLDKRAGHKEYSKGRACADTRCLIIGGGPCGFRTAIELALLGAKVVVIEKRDTFSRNNVLHLWPYTIHDLRNLGAKKFYGKFCAGSIDHISIRQLQLMLLKIALIVGVEVHVNVEFVKLLEPPEDQSTDGQGWRAEIRPADNPVSDYEFDVIIGADGRRSTLDGFRRKEFRGKLAIAITANFVNRNTTAEAKVEEISGVAFIFNQKFFLELKEETGIDLENIVYYKDNTHYFVMTAKKQSLLDKGVIINDYIETERLLAFDNVNQEALLSYAREAADFGTNYQLPSLDYAINHYGQPDVAMFDFTCMYASENAALVREKSHRQLLVALVGDSLLEPFWPMGTGCARGFLAAFDTAWMIKGWAQGKEPLDLLSERESIYRLLPQTTAENISKNFEQYTIDPATRYPNLNSSCVRPHQVRHLFISGEQDLSSLERSGQTRRSVSISRRESEVRPGRLLLWCQNQTQDYRGVNVTDLNTSWRSGLALCALIHRQRPELIDFDSLNEADCAKNNQLAFDVAEREFGIQPVTTGKEMDAERGPDKLIMVLYLSKFYEMFHKSTQSVTGLPKEIDANNGDCSSKTANSLYNSINHARKRIPKLDKKLEESDVNRKRKKASSHHEELMSCQTAPPAGEREEQKENKVRSMATQLLARFEENAPSCALRRQSDSESDSDADRPVSLDLTENPRFARPKIEPTHPSTTPDKAKWQPSPYLRLLESNTRSETLHTEHYVESQSSHRLTEIQSECQYSSVSSAYKSSERRPRSPLIPFTPTLSPMMHCLQQLEEQVIQQRKREPLNRKSIKERAQKLSSLFTGNPAQPQTDESSPAVSPSSPPQTIPESSTLSCLLSPAPSLTHKQCSEASETHLKADKHTEIRRVERLDPSKQRTVGKVSSAIGVKAATLAILYETDHRPNNPITLSLTEARRCAESGLVSVRKEFSASLGGSDTCVFCQKRVYIMERLSAEGFFFHRECFRCHICGCSLRLGAHTFDSQQGTFYCKMHFSQRKTSTRHRRGEIQDGGIRSSSITISNHTSTDGTRGQPSGGEFDSSTQQDLQTLPDSKEIISVSEVKDSSKKADPADSAPACPDSPLQKVKRSTAKGEITNKNILWKKKIRSTLPLVLMKKFHRGKPEDKTEVLAEEDGNSDFEEIHESLSSKKPSNPSTDSNCLPTKDNSSTPLDEIPKIPLYRTHVLPEYPKPSSSSPEPIVTSISSDPISFSPKKKLTLSLSEKEKLLNWDLTNPGKSGAEEQQQQHVKPSISLQHDHPEPTHPQPEPAPPLFGFQQWANNLRKSFSKGSNPVVLRRNRPMKARPLSEGSFNVGAVFQDEERCGSLVDEGEARPRTESEIASLLEQVALGSKTSRGTKDDMASLPPRKLNFFSSLRIKRVEGAEQSRGEGQKDILSILSRFRNKASAQQQQQQKSNSSSEDEQEPKLTHSGALQKKKEKIAIRQTKSDELKRLHRAQVIQRQLEEVEEKQRSLEEKGVALEKVLRGENGDDGSTDEAALLQTWFKLVLEKNKLSRYESELMIFAQELELEDTQSRLQQDLRRRMATEDCEKSASELVEEQNILVEIMKVVEKRDKLVSLLEEQRLKEKAEDRDLESLILSRGYQFHWT", "length": 1679 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1RXL1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152495", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFTICNDSHSDFILLGFSDKPYLEKILFWVVLIFYCLTIIGNLVIILVSLKDPKLHIPMYYFLSNLSLLDLCFTSSCVPQMLVNFGGPEKTISYIGCAIQLYVFLWLGATECVLLVVMAVDRYVAVCHPLQYTTIMHPKLCLELAILAWGTGLIQSLTQSPATLQLPFCSNRRLYDIVCEVPALIQVSSADTIYNEIQMSIASIILLVVPLVIILSSYGAITKALLRVKSTEGQKKAFGTCTSHLLVVFLFYGTVTAVYLQPKSHYAHEQGKFLTLFYTVITPTLNPLIYTLRNKEVKGALIRLGKKTWDDLCWTIA", "length": 317 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD0-1", "protein_name": "Transcription elongation factor A like 3", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRQVKHLRSGSLPTPGLSVTSPSPTARPATPRTACLFPALCKTRKGEGTCPESLQDKKRRKNLNMEKLCKENEGKPESEGKPEDEVEPDNEGKSDEEEKPEVEGKSAHEGKLQNEGQPEDEGKPEDEGKQEKQGKSEDEGKPPGEGTMESQAKPESEPRAAEKRPAEDYVPRKAKRKTDRVTDDSPKDYEEDLQERHLGSEEMMREGGDLSRAQEELRKRQKMGGFHWMQRDVQDPFTPRGPRGVRGMRGGGRSQRGLHDIPYL", "length": 264 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1RYD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110258723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "LLVVVLVTYLLTLVGNTVIILIASIDPNLKTPMYFFLTHLSLVDICLTTSIVPQLLWNLRGPAKTITTLGCAVQLYVSLALGSTECVLLAVMAFDRHAAICKPLHYAAVMNPRLCQALAGVAWLSGVGNALIQSTVTLWLPRCGHRRLHHFFCEVPSMIKLACVDIHTNEVQLFIASLVLLLLPLALILTSYGHIVKAVTRIKSVQAWRKALGTCGSHVMVVSLFYGTITAVYIQPNSSYAHTSGKFISLIYTVLTPTLNPLIYTLRNKDVKGAMRRLFRRDLGS", "length": 285 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S4M2-1", "protein_name": "Small ribosomal subunit protein uS13", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSLVILEKFQHILRVLNTTIDGWQKIAFATTAIKGVGRRYAHVVLRKADIDLTKRAGELTEDEVEHVITIMQNPGQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLHEDVERLKKIRAHRGLRHFWGLRVGGQHTKTTGRRGHTVGVSKKK", "length": 152 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S6C0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MGNCLTPHTSEDLLVPASATHLGGRRRRARSRERRPRDQVPGWAPAAPLVQEEQVRVPQRISQIQCLPKGVYKRDGSQEKMEQEECAICTLDFVCGDPIRSLPCKHFYHLGCIDEWLTRSFTCPYCRGPADGPQPSSRDTP", "length": 141 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7I2-1", "protein_name": "Beta-defensin", "gene_name": "DEFB125", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MNLLLTFMICGLLTLVTKAGWNVERCWSYNIGHCRRRCLHLERYKHLCMNKRACCIPLSSDDPYTQWPLPPEDQTVGMKTPYFRPVSPGSELDDQITITITVDQESTGTEQDIEGTAISFQASTPIPENIEDTKFSDKANTLNLHKL", "length": 147 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1S7N4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100152708", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MDQTNSSVVTEFVLVGLTQSLGMQFLLFLLFSTFYVGIILGNLFIVFTVISDSHLHSPMYILLANLSLIDLGLSSTTVPRMISDLFSDCKTISFHNCMIQMFFIHVTGGVEMVLLIAIAYDRYTAICKPLHYLTIMNPQMCMLLVVAAWITGVTHAVFQFAFVINLPFCGPNNVGSFYCDFPRVIKLACIDNYGLEFVVTANSGFLSTGTFFLLVVSYIFILVTVRQHSSKDLSKAFFTLSTHITVVFLFFLPCMFLYVWPFPTKSLDTFLAIVDFAVTPVLNPAIYTLRNRDMKVEMRRLSRQVISSREMT", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBB9-1", "protein_name": "DNA-directed RNA polymerase RBP11-like dimerisation domain-containing protein", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MHALPAFESFLLFKDEKITIHKDTKAPNACLFTIDKEDHTLGNVIKSQLLKDPQVLFAGCQVPHPWEHKIIVPVQTTPDYTPQEALLNVITDLISKLSLLEERLRVAIKDKQEGIECWTGRGPAWPGPALTLALLQAPCG", "length": 140 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SBV4-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100154723", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MESENITVVTEFIFVGLTQSRNIQLLVFVLVFIFYLIILPGNFLIILTIRSDPGLTAPLYFFLGNLAFLDASYSFIVAPRMLVDFLSEKKVISYRGCITQLFFLHFLGGGEMLLLVVMALDRYIAICRPLHYSTVMNPRACYALSLAQWLGGFVHSIIQVALILHLPFCGPNRLDNFFCDVPQVIKLACTDTFVVELLMVFNSGLLTLICFLGLLASYAVILCRVRGSSSEGKTKAMSTCTTHIIVIFLMFGPGIFIYTRPFRAFPADKVVSLFHTVIFPLLNPVIYTLRNQEVKTSLKKLLINN", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SJ79-1", "protein_name": "Olfactory receptor", "gene_name": "LOC110259717", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MEQNNGTKGTEFILLGFAGQHKSWPVLFIVFLVTYVVTLVGNIGMILLIKIEASLHTPMYFFLQNLEEKVDLCYATAITPKMLQNFVWTEHSISFIGCMVQLLTYGAFATSDCYILAAMAVDRYVAICNPLRYPTVMSQRVCIQLVIGSYFMGFLNASVNTSFTFQLNFCKSNKINHFFCDAPPILALSCSSIYFSIMLLAAFVGFNLTCTVSVVIFSYVFILAAILKISSAAGRKKAFSTCASHLTAVTLFYGTLSYMYLHHRTLESQEQEKLASVFYGIVIPMFNPLIYSLRNQDVREALKGVGKQCF", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SLL7-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MRRENQSSISKFLLLGLPIQPEHQGMFFVLFLVMYLTTVLGNLLIILLIRLDPRLHTPMYFFLSHLALTDVSFSSVTVPKMLMNMQTQDQSIPYAGCVTQTYFFIFLACIDNLLLAVMAYDRYVAICHPLHYAIIMREELCLCLLVLSWLLSCAYALTHTLLLAQLSFCADIIPHFFCDLDALLKLSCSDTSLSELVTFTAGAAVVIFPFIGILVSYGHIGLSILRVPSTKGICKALSTCGSHLSVVSLFYRTSMAVYLSSSGQFHDKDIIVSVMYTVVTPMLNPFIYSLRNRDMTLALGILFRNINIFSK", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SMZ6-1", "protein_name": "10 kDa heat shock protein, mitochondrial", "gene_name": "HSPE1", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTRVVLDDKDYFLFRDGDILGKYVD", "length": 102 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SRB7-1", "protein_name": "Large ribosomal subunit protein eL31", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MAVVQKSGEKKRGRSAINEVVTREHTTSIHKRIHGVGSKKRAPRALKEIRKFAMTEMGTPDVRNDTRLNKAVWAKGIRNVPRRICAPLSRKRNEDEDSPNKLYPLVTCVPVTTFKNLQTVNEDEN", "length": 125 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F1SUB9-1", "protein_name": "Multifunctional fusion protein", "gene_name": "IL1B", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MATVPEPAKEVMANNGDNNNDLLFEADGPKEMKCRTQNLDLSPLGDGSIQLQISHQLCNESSRPMVSVIVAKEKPMNPSSQVVCDDDPKSIFSSVFEEEPIVLEKHANGFLCDATPVQSVDCKLQDKDEKALVLAGPHELKALHLLTGDLKREVVFCMSFVQGDDSDDKIPVTLGIKGKNLYLSCVMKDDTPTLQLEDVDPKSYPKRDMEKRFVFYKTEIKNRVEFESALYPNWYISTSQAEQKPVFLGNSKGRQDITDFTMEVLSP", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F2Z5L2-1", "protein_name": "Histone H2A", "gene_name": "H2AC18", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKTESHHKAKGK", "length": 130 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "F4IWB9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 28", "gene_name": "CYP705A28", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIMGRSCSEKNGEAERVRGLVIESLALSPKIFLGMIFHKPLKKLGISLFQKDIKSVSPKFDELLEKFLVEHEEKMEEDHYKANDMMDLLLEAMEMRMQNVNLCIKRVSNTKARKPPILFRYGKYSNNSLLLQELLVAGTDTSALATQWTMAELINNPTILERLREEIESVVGNTRLIQETDLSNLPYLQSVVKEGLRLHPPASISVRMSQERCELGGFYIPEKTLLVVNTYAIMRDPNFWEDPEEFKPERFITSSRSEQEDEMREEVLKYIPFSAGRRGCPGSNLAYVSLGIAIGVMVQCFDWRIKGEKVNMSETAGTIMLAMAQPLKCTPVPRTLNLLPSSLHIPSS", "length": 348 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4J311-1", "protein_name": "Zinc finger (C2H2 type) family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLDGVELLLDLREMVSQSGFEKSTTCSGVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLHCVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVHREISGKLACKRKYTEDYNPFSDSLKAKKIVKKPSSFEVSQEEKILHCVELKQDFGELLAHSGFDKSISCSKSIKVKKVARKNEKTEDSTSLFGVFVGEMSQRLHGCKTCGRKFGTLKGVYGHQRMHSGNHNRIEDENGLERIWGLKKKSRVCSVSAFDRFKGSSFMAEIEKHEVIEAALNLVMLCQGVYDFASISNLPLGDGFMDLELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLHRWKLVPKPEYIEDDSSLLDSSEAKKIVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVSQPPSFEVSVDEKILYRAEPKLNFSEPLAHSCFDNSSSYRSIICGKSFVCSQALGGHQTLHRSIKGQLAGTEDGNSLSVTDSEASKIVAQPSSYKSQGI", "length": 650 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JLV4-1", "protein_name": "Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein", "gene_name": "DHYPRP1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASTTIILFLSFSIIPLLTIVRADNHSVYCPPPPPCICICNPGPPPPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAITPPPPPAITPPLSPPPPAITPPPPLATTPPALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIIRNVSDLDAVTCFCKSVGAPRFSLSPNFGIFFKVCGRRIPQGFSCPGPSPTISPPPLPPQTLKPPPPQTTPPPPPAITPPLSPPLVGICSKNDTELKICAGILAISDGLLTTGRAEPCCSIVRNVSDLDAVTCFCKSVGARRFSLSPNFGIFFKVCGRRIPQGFSCP", "length": 375 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5R6-1", "protein_name": "Cell division cycle 20.6, cofactor of APC complex", "gene_name": "CDC20-6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFAVPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIEEYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEPFAHVNHIR", "length": 428 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F5H284-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A-like 4D", "gene_name": "PPIAL4D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQF", "length": 164 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "F6R3J9-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1G", "gene_name": "Speer1g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNKKNKEVEIDWALIEKYLVDLNLNGQTGADQQP", "length": 157 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6X687-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1A", "gene_name": "Speer1a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWRARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKQSSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMPVTQNQKNKEVEIDWALIEKYLVDLNLNGRTGADQQP", "length": 157 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F6YNI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRCRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILVGLQDYQDNKADVILKYNLDEARSLKAYGELQEHAKINETDTFGPGDDDEIVFDDTGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7AMQ8-1", "protein_name": "Exocrine gland secreted peptide 8", "gene_name": "Esp8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKVSAMTSFPVMLFLIILLLPSICSEERTQADPTISADNKKNFKTVVDLTDCQCERNFIESLESTLPASNQDQTLFENMTNQHKLNLSKMLSVLSKCCTQKQQVDTVHFRRMPHRIQSTKQNNYKKQVLYPMQEFMNLTRDVLVSRYV", "length": 149 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7C9P2-1", "protein_name": "F-box and WD-40 domain protein 25", "gene_name": "Fbxw25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEIHLPSLPMLKILSYLDAYNLLQAAQVNKNWNALASSDVLWRKLCQRRWHYCDMVTLQLQGKETWKQFFIYRIWQEHAKTRAKPEDFTYKEIPVECGFYGYACYISGHGLTRNGQGKSVICMVSSKNTISTWDIHKSVITWVSPVQPASINLLTTLPDMHIAVTVDIQSTIKLWDCHNREALATNNLESPCKSLKAVISKDGPIVLVGDTLGNLYIFRIPDLHLISTVNVFPYGFDEIDCSPQKKWVLLSKNYPHILPKVFYMSSLLRTSEFSAPVSTILEFSLCQGAFWTPRREDRITLMSRSGFPQITKFETFDMKLEGIGNKVAVQGKLIASFFLPYYEESPNWIGVSDKDVIVCSTHFFLLLFTINGLHLQTFQYCPETIVRLCVDPVHVIVTCNNGSLDVYAWEERSLLLRKCYRLQNKRPLPLYGFINNLLCDDVSIVQLMRDGHGPYSLIAYALNICS", "length": 466 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F7ELE5-1", "protein_name": "NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial", "gene_name": "Ndufs7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "RRTVVYTARARSQEKSGSEPLSLWFRFPLVSIWALDQNRNSLEDGPQRLSEGRGQDGGAGGSWLALCTDPGSAHRHSGSAAQSPPECGSHWEPEQSAVSKAGAGAVVPKPSHLPRSRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR", "length": 271 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7F947-1", "protein_name": "Beta-defensin-like domain-containing protein", "gene_name": "Spag11b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDLSQRPPNVFRHVVDFLKKNQTHITQACSGNSGGRKASSSDLCGCALCLEAPSPHSQLSYKRACSSCPPTRGSSVPAVPSTAMKQRLLPSFVNLLLAALLLPGKAETWLRSWTQALSAVVTLGSSSASSINHLVTEPPSSPQDEFPAQGGNGSGLLHHRVKRFPPRTPPYHEPGPNYQIVNCKKNEGFCQKYCNFMETQVGYCSKKKEACCLHPF", "length": 216 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F7FNC4-1", "protein_name": "Interleukin 36, gamma", "gene_name": "Il36g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSKYPHSPCTASGKETPDLGQVSDVDQQVWIFRDQALVTVPRSHTVTPVTVTVLPCKYPESLEQGKGTPIYLGIQNPDKCLFCKEVNGHPTLLLKEEKILNLYHHPEPMKPFLFYHTLTGATSTFESVVFPGSFIASSKIGKPIFLTSKKGEHYNIHFSLDII", "length": 164 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "F8VPX6-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 4A1", "gene_name": "Speer4a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVNGRETREGRKDANLPPESNEGRRRWTWRMWMAHRQTTSSVPVTSKKQFEKEEKELIKKIQLTTKETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHNLEMENMEARENKQEFKKEKNFYRNLHTRILLEENLIKKKLAILQQESKEIHADWAIIQERLVELNLSCKDEQEKTSNLETQENQVSEAARELGLATAEEDSILQNELPCQEAPAEHHTQNPPSSSDESSSDESSYSTCPAWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "F8VQM2-1", "protein_name": "C-C motif chemokine ligand 26", "gene_name": "Ccl26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFFDLGLLVLLAIFLSVQLGVATCGSSIAMSCCPNFSYYVIPWSWVYSYKFTDKSCTSDGVIFFTKTGKQFCVQPGAKWVQRFISLVNTRNHL", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3GSG1-1", "protein_name": "Ferritin", "gene_name": "LOC100767129", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGFLRKSHRRQRHRCPLRVSRATVAYPLVFMTPPIISPPSQVRQNYHFDCKTAVNNHVQLQLHNSSVYLAMAFYFDSEDVAQKNLASFFLNKSHECTAQAEMFLELQNQRGGRISLGSIREADRNNWLGGLQAMECALQLELSTNQSLVALHQLASSKSDAHLCSFLKNHFLTKQVEVLKEISGYVTKLRQMGSPDDGIAEYLFGKLTLDDNKGK", "length": 215 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3GWA3-1", "protein_name": "60S ribosomal protein L18a", "gene_name": "LOC100764432", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MKASGTLREYKVVGRCLLTPKCHTPPLYLMRIFALNHVVAKSRFWSQLKKMKSSGEIVHCGEVRPEVPLQVKNFAIWLHYDSRNGTYNMCREYWDLTVTQCYRDMGAQHCARTHCIHIMKVEEIASGKCQRPAVKQFHDSKIKFLLPHRVLRCQHKPHFTTKRLNTFF", "length": 168 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H156-1", "protein_name": "Prefoldin subunit 4", "gene_name": "LOC100773780", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVATMKKAAAEDVNVTFEDQQKINKFARDTSRITEQKEIEVKKNHLQNLEDTFNDIMLADGDCFMTQYLIRDVLISHSQEEAQEMLEEAKKTLQEEIDALESRVGAIQWVLANLKVQLYTKFGSNINLGVDES", "length": 133 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H2T6-1", "protein_name": "Histone H4", "gene_name": "LOC100757199", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3H8X2-1", "protein_name": "1-acyl-sn-glycerol-3-phosphate acyltransferase gamma", "gene_name": "Agpat3", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MGLLAYLKTQFVVHLLIGFVFVVSGLVINFTQLCTLALWPISKQLYRRINCRLAYSLWSQLVMLLEWWSCTECTLFTDQATVDHFGKEHAVIILNHNFEIDFLCGWTMCERFGVLGSSKVLAKRELLCVPLIGWTWYFLEIVFCKRKWEEDRDIVKEGLQCLSDYPEYMWFLLYCEGTRFTETKHRISMEVAASKGLPPLKYHLLPRTKGFTTTVQCLRGTVAAIYDVTLNFRGSKNPSLLGILYGKKYEADMCVRRFPLEDIPADENDAAQWLHKLYQEKDALQEMYKQKGVFPGEPIKPARRPWTLLNFLCWATILLSPLISFVLGVFASGSPLLILTFLGFVGAASFGVRRLIGVTEIEKGSSYGNQELKKKE", "length": 376 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HAB3-1", "protein_name": "40S ribosomal protein S15", "gene_name": "LOC100759804", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAEVEQKKKRTFRKFTYCGVDLDQLLDMSCEQLMQLCSTRQRLLLNCSLWRKQHSLLKSLRKAKKKVPPMEKPEVGKTHLRDMIILPEMAGSMVDVYNGKTFNQVEIKPKMIGHYLGEFSITYKPVKHGGPGVGATHSSRFIPLK", "length": 145 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDI6-1", "protein_name": "Lipid transferase CIDEB", "gene_name": "Cideb", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEYLSALNPNGLLRSVSTMGSELGRRVWNSGPPPQRPFRVCDHKRTVRKGLTAATRQELLDKVLETLLLSGVLTLVLEEDGTAVESEDFFQMLEDDTCLMALERGQSWSPRSGMLSYGLGREKPKHSQDIARITFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGVGPKKVLRELLRWTSSLLQGLGHMLLGISSTLRHVVEGAERWQWHKQNHLRS", "length": 219 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HDS5-1", "protein_name": "Histone H3", "gene_name": "LOC100773314", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HGI3-1", "protein_name": "PHD finger protein 6", "gene_name": "Phf6", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSSSIEQKKGSTRQRKCGFCKSNRDKECGQLLVSENQKVAAHHKCMLFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEETFNEHELEPSSPKTKKKSRKGRPRKTNFKGLTEDSRSTSSHGTDEMESSSYRDRSPHRSSPNDTRPKCGFCHVGEEETEARGKLHIFNAKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIKRGKRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIENMSRGIYKLYCKNHSGNDERDEEDEERESKSRGRLAIDQQLTQQQLNGN", "length": 364 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HJW3-1", "protein_name": "Calcium homeostasis modulator protein 6-like", "gene_name": "LOC100774768", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEKFKAVLDLQSKHRSALGYGLVTLLTAGGEKIFSEVVFQCPCSATWNLPYGLVFLLVPALALFLLGYALRTRTWRLLTGCCSWSASAQSSSGLQRVFVCAQISAAAALPPLTWVAVALLGGSFYQCAVSGSEAMARHLCKGRDPSCAAKLPQVPCKKQEAEMQDILSQLKAQSQVLGWILIAAIIILLLVVKSVTRCLSPVSYLQLKFWEIYLEKERQILQGEAMEHATQLAKENVRCFFDCTNPKDCSTPSSKAWQQISALYTFNPKNHFYSMLHKYVNRKDMSGSLRSVEGDAVVPVLGFVDASGMATTHGV", "length": 315 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQ40-1", "protein_name": "Eukaryotic peptide chain release factor GTP-binding subunit ERF3B", "gene_name": "LOC100767578", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDLGSSSDSAPDCWDQVDMEVPGSAPSGDGFTSASTAAAEAAEAEAQRQHLSMAFSSQLNIHAKPFVPRVSAAEFVQSFLPGSAQPPAPTTSSSDETCTGAGDPQGKRLGWGAPVEPSKDGPLMSWEGSNSAVTMELSEPVVENGEVEMALEESWELKEVSEAKPGGSLGDSGPPEESGKEMMEEKEVIRKSKSMAIPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIVLINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD", "length": 631 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HQN5-1", "protein_name": "Transcription factor 19 isoform X1", "gene_name": "Tcf19", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MLPCFQLLRIGGGRGGDLYTFHPPSRSGCTYRLGCRADLCDVALRPQQEPGLISGVHALLHAELQGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGQAGTSSSEFYFMFQQVRVKPQDFAAITVPRSRGEAGTGFQPMVPSQGAPQRPLSTLSSAPKATLILNSIGSLSKLQPQPLTFSRGGGRPQSLAVPTQPGEVGASPPAPPTRNRRKSVHRVLAELDDENETSLSPLSVLMEPRKKLRLEKAALVSSGRD", "length": 266 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3HWQ5-1", "protein_name": "Zinc finger protein 219", "gene_name": "Znf219", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEGSRPRILVGHLEPSPPAFDGELDLQHYSNGPGVSTGSPGMGAVGWSETRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREAQLGRARSSGGMQATPATEGLARPQVPSSSAFPCPFCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATSTPEPQPPPQPEPRSALEPEPEPEPRPEPEHEANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSTPARAPQPPDMSLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSVRAGEVRPNGEGADPGAGRSYGGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGTLTSLHPHPGEGSGQSAPAVGAQARPTGTQEENGLLVGGARSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSPRGAASLQPQSGAKPTQASATWVEGTASTRPSSSGTGAGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRQPRADTSPPYVRAPSGETPPSPPLEEEGSPGLSRSGEAGLGGQER", "length": 725 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I071-1", "protein_name": "Large ribosomal subunit protein uL29", "gene_name": "LOC100753244", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAKIKARDLRGKKEELLKQLDDLKVELSQLRVAKVTGSAASKLSKIRVVQKSIVRVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMHRQLTKHEEKLKTKKQQRKERLYPLRKYAFKA", "length": 122 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3I1Z3-1", "protein_name": "DNA damage-inducible transcript 4 protein", "gene_name": "Ddit4", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MPSLWDRFSSSSSSSSSSSSGTPATDRPPRSAWGSAAREEGLDRCASLESSDCESLDSSNSGFGPEEDSSYLDGVSLPDFELLSDPEDEHLCANLMQLLQESLSQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVAQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLLSSANSSLVPGYSQSLTLSTGFRVIKKKLYSSEQLLIEEC", "length": 231 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IAH8-1", "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "LOC100755128", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MASNNTASIAQARKLVEQLKMEANIDRIKLSKAAADLMACCAAHAKEDPLLTPVPASENPFREKSFCTIL", "length": 70 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IG76-1", "protein_name": "Olfactory receptor 7E24 isoform X2", "gene_name": "LOC100765597", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MYILALFGNLLIILTVSSDSHLHTPMYFFLSNLSMIDIGYISTTVPRVIVDIQTHCPVISYVGCLTQMSLIIIFACMDDMLLSVMAYDRFVAICHPLYYQVIMNPSSCGVLLLGSFLLSLVNLLLHYVAVLSFSNCEDIFEISNFFCGPSELFKLACFDTFTTNIVRYCAGALFGLLPISGIIFSYFKIVSSIMRSSSSSNGKWKTFSTCGSHLSIVCLFYGTALGMYFSSSLSLSPKTNAVASVMYTVVTPMLNPFIYSLRNKDIKTALRKILSRTF", "length": 278 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3IGD7-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100770882", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSGANSSSLTPEFFVLNGIPGLEDAHVWISLPFCFMYMIAVVGNCGLMYLIGHEEALHRPMYYFLTLLSFTDITLCTTTVPNTLCIFWFNLKKIGFKACLAQMFFVHTFTATESGMLMLMALDRYVAICYPLRYGTILTNPVIAKASLATFLRSVAFILPFTFLTKRLPYCRGNTIPHAYCDHMSVAKISCGNVKVNAIYGLLVALVVCAFDIFCITVSYTMILRAVMNLSSADARHKAFSTCTSHICAIVITYVPAFFNFFTHRFGGHTIPHHIHIIVANLYLLLPATMNPIVYGVKTKQIRESVIKFFSGDKSGITEIKGLQNK", "length": 326 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3INQ1-1", "protein_name": "Olfactory receptor", "gene_name": "LOC100763177", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MFCNTSTPGHSTFLLTGFPGLEASHHWVSIPINLICVVSILGNSIILFLIRTDPALHEPMYIFLSMLAASDLGLCASTFPTMVRLFWLGIRELPFDLCAAQMFFIHAFTYVESGVLLAMAFDRFIAIRDPLHYATILPHSAVAKVGAAVLIRAILLNLPGPILLRRLLFPQVSVLSHCYCLHCDLVGLACSDTRINSLVGLVSILLSLGLDSSLIMLSYVLILRTVLSIASPGERLKALNTCVSHLCIVLIFYLPKLGLSVLHRVEKHSYPALAVLMANLHFLVPPFMNPVVYCIKSKQIRQGFLKRFQQKRVDVS", "length": 316 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "G3MYE2-1", "protein_name": "Large ribosomal subunit protein uL18", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MGFVKVVKNKAYFKRYQVKFRRRQEGKTDYYARKRLVIQDKNKYNTPKYRMIICVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAVAYCTGLLLACRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGALTCYLDAGLARTTTGNKFFGALKGAVDGGLSIPHSTKQFPGYDSESKEFSAEVHRKHIMGQNVADYMRYLTEDEDAYKKQFSQYIKNNVTPDMEEMYKKAHAAIRENPVYEKKPKKEVKKKRWNRPKMSLGQENDRVAQKKASFLRAQERAAES", "length": 295 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3MZM9-1", "protein_name": "Uncharacterized protein", "gene_name": "LOC107131211", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTRAEFKQTKLQELRRRLLIIVIGTLITGYMVTCTCLLHYRCDSKEAHKAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKLVSQVSPSYPEKAIKPTWPPSLQCRVKPTKTPLPYPKNQSFPEHSSADKLTKRQRYLKLKCPASAGRAEILSRPQPVKFCRCYKEKCLVCRAVSEPFITHVSEANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSPNN", "length": 361 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3UW31-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r176", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVTLQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQFVTLAPGTWGRVMLPGRAPNFLRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDSNSKSKWVCSTSGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFVDSRVWLRRVKEILSVSFPTFSPLLLIFRDPKDPCSLLFGC", "length": 304 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3UY92-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r158", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQLLLLCQFGVGTVAKVFLFVRNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVARSTNLCSTCVLSFHQFVTLVPLNRGKGKLVLRASVTNMASYSSYSCWFFSVLSNIHIPIKVSGPQIKDNNTDSNRKLFCSTSGFSVGTVLLQFAYDATFMSIMVWASVSMVLLLHRHRQRMQHILTPNQDARGQAESRATRTILMLVVTFVSFYLLNFICIMLHALFMHSHFFVRLVSEILTAVFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G3V9M0-1", "protein_name": "Cystatin S like 1", "gene_name": "Cyssl1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MACLLYTQLFLLNTFILFLNLSLNPVLGQILAGIEKSIIEEEGALEALNFAVSEYNENNSDLYLSRVVEVKTVKTVQQQIEAGKTLLFDVILGKTACLKTQDDLSDCPLNEPTDLQEREFCSFEVHLPDWANAINLLSSICNRI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3X693-1", "protein_name": "Ig-like domain-containing protein", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "RVFLPLLLLGVILPGGDNEDGPTSFHLIQISTFVNNTWAQNQGSGWLDDLQIHGWESDSGTAIFLKPWSKGNFSDDEVTELVDLFRAYFIGFTREVQDRVNEFQLEYPFVIQVTAGCELHSGEAIESSLRGALGGLDFVSIQNHSCVPAPDGSSRGQKFCALTTQYQGISDIIERLLSETCPRYLLGVLDAGKAELQRQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVRVMWMRGEQEQPGTQQGDLMPIGEAAGLNCRVKHSSLGDQDIILYWGHPTSIGLILVAIIVPSLILLICLAFGVLRFMGSHRIGHD", "length": 317 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3X9Q9-1", "protein_name": "Predicted gene 6526", "gene_name": "Gm6526", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGDQGETRPRQKESAIPSCKKRRMKSFWGRHMSAGKKSSQNCNITNHMKNMNKLEDMKFYIRKINAKRLELFPILDIDMNTDLNYRMNIEFTIIKSQHEKTMLDMEKMTQSISDTIETYKEFIEDKDSYSFTHSYLLKECNQLKEKVRMLLNENRKLLVEQADQEASYGEEKRFCDESSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "G5E8X8-1", "protein_name": "Oocyte maturation, alpha", "gene_name": "Omt2a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTLVFTKVHLESWVYKGLRGQHDSILELLKENLHHYLCIEFDEGLNDTVVYIIGFKFFAMFAMFVIVSLACNLRTKRNRARAWARGLQSPVWWNRRYFI", "length": 100 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ46-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLSFMSSLLENILYFQAGLGVLANIFLLVFYIFIILGHRPKPMDLISCQLTFVHIMMFLAGENFWLANIFESLNVENDFKCKATFYTKRVMRGLSICITCLLSVFQAVMISHRNSLLAKFKHKLKIYMINALFYIWTFNLSLSSNLIFYVGGFTNMSQTKQLKVTKSCSLIPMNYIIRGLILTVISSRDMFLVGVMLTTSTYMVIILCRHQRQCKHLHSTSHLRASPEKRATQTILLLVVFFVIMYWVDFIISSTSILLWMYDPVIMIVQKFVVNAYPAITPFVQISSDTRVIRVVKNWHS", "length": 303 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BJ88-1", "protein_name": "Vomeronasal 2, receptor 3", "gene_name": "Vmn2r3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMAIRKKCLILELTVFLCVELYAQYEDQNMTCRLMRKFNLTGYVEAENHHFVIGGQFPVHYRTIPTSDSDEEPESPMCEGFNFRGFRWMKTMIHTIKEINERKDILPEHTLGYQIFDNCFSTTKAMESSMVFLTGQDEYKPKWRNSTGKYLIGIIGAGGSTMSLAGARILLLNDVVQVGYASSSSILTEYLNVYRTIPSDKFQTEAIVNLIRHFGWVWIGAIASDDDYGKHGVKSFRKILETNNLCIAFSETIPKVYSNEKMQIAIDAVKSSTAKVIVLYATDFDLSPFVLEVIHHNIAHRTWIATEAWITSALIAKPEYFPYFGGTIGFAIPRSVIPGLKEFLYDVHPSKDPNDVLTIEFWQTAFNCTWPNSSVPYNVDHRVNMTGKEDRLYDMSDHLCTGKEKLKDLKNTYLDTSQLRITNNVRQAVYLMAYGLDRLIRVLIKEYREYLLHPKILAFMSYKLFEYIRKVKFTTHDGRKIELNVHGDIENGYYDILNWQMDNTGDIAIVKVGEYKFTRSKYELVLPKNSTLFWNTESSRLPDSVCTKVCPPGTRKGFITGQPVCCFDCIPCEDGYVSEKPGQRLCNPCSEDDWSNAEKNKCVPKHVEFLAYEEALGFTLVILSIFGALVVLAVTVVYVIHRHTPLVKANDRELSFLIQISLVITVLSTMLFIGKPCNWSCMARQVTLALGFCLCLSSILGKTISLFFAYRISISKTQLISMHPSFRKLIVLLCVFGEIGVCASYLVLKPPSMFKNIERQNVKIIFECNEGSVEFLCSIFGFDVLLALLCFVTTFMARQLPDNYYEGKCITFGMLFFFIVWISFVPAYLSTKGKFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRNTDETVGGRVPTVDRSIQLTSASVSSELNSTMVSTVLDE", "length": 909 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BKT1-1", "protein_name": "piRNA-mediated silencing protein C19orf84 homolog", "gene_name": "Gm52993", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDELEDGALSNGDNLSLPSAGTESWPTSATPGLPPSLLSTLDPTHLGLPEQLASVTVPIRLDTLSYLLHSALLGTYNLQQSLPPCSCTAQPSHIWPDTVRRPPRRSGQARGGWEVRRRPSRGWGRGRGRGRVWAQSQRGPERAEERERNMAGEPGAGPSTPPVTPPSQDGQKEAGGLSEDWEADY", "length": 185 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "H3BLP0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLTNILYFQAGLGILANTFLLCFYTFTILCHRSKPMDLTSCQLTLAHILFLLAGGDNWLAVILESLNIENDFKCKAIFYTNRVMRGFSICITCLLSVFQAVTISPHTSLLAKFKHKLKTYIIYAVFYIWFYNFLVCSHLLVYVGGFNNVSETNQMRVTESCSLFLMNYIISGLIFTVTTFRDVFLVGVMLITNAYIVIILFRHQRHCKHLHSIRHLRVSPEKRATQTILLLMVFFVVMYWVEIIISSTSLLLWMYDPGFLTVQKLIVTVYPTITPLVQISSDKRVINVLKNLQSKCQQIF", "length": 302 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "I3ITL1-1", "protein_name": "Gap junction protein", "gene_name": "gjc4a.2", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSWDFLTHLLDEISNHSTFVGKIWLTLLIVFRIVLTVVGGETIYDDEQSEFVCNTLQPGCKNVCYDAFAPLSHVRFWVFQIIMISTPSVMYLGFAMHKIARMADNEYQPRKHKMLSTVHQRMNRDYDMVDEMTEEVPMIPEEIEPSEKDNKSAASTKTTAASDAAVKHDGRRRIKRDGLMKVYVLQLISRVAFEIAFLFGQCILYGFEVSPSYICTRSPCPHTVDCFVSRPTEKTIFLLIMYVVSVLCLALTVLEILHLGIGGLRDSFRSRANRRLPVHRPSTSTICHRLSSAPPGYQAVQKKYSSGKLKAEFLSDSGRESLADDNTTRDLDRLRRHLKIAQQHLDQAYHTEEVGASHNSGPDSKSIAAEQNRLNQAQGGFGSTEEKVFKEAHA", "length": 394 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "I3L8A5-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "FPSRQERTMRRENQSSISEFLLLGLPIPPEQQGVFFALFLGMYLTTMLGNLLIILLIRLDPRLHTPMYFFLSHLALTDISFSSVTVPKMLMNMQTQDQSIPYAGCVTQMYFFMFFACLDNFLLTSMAYDRYVAICHPLRYTSIMRGGLCTLLVTVSWILSCANALCHTLLLAQLSICAENTIPNFFCDLGALLKLSCSDTSFNDLAIFIAGVATIMLPLLCILVSYGHIGATILKIPSTKGICKALSTCGSHLSVVFLYYGTIIGLYLVPSSSTSSHKDIVASVMYTVVTPLLNPFIYTLRNRDMKGALEKLFHKAPVLS", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LBH4-1", "protein_name": "Large ribosomal subunit protein uL11", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MPPKFNPNEIKAMYLRCTSGEISAKSALAPKIGPLGLSPKEVGDDIAKAAGDWKGLRITVKPTIQNRQAQMEVVPSASALIIKAPKELPRDRKKQKNIKHSGNITFDEIVNIARQMRRCSLARELSGTIKEILGTAQSVGCNVNGRRPHDIIDDISSGAVECQAS", "length": 165 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LC12-1", "protein_name": "Olfactory receptor", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MFGANLTIFHPTVFILLGMPGLEIYHTWLSIPFCLMSIVAVLGIGALILVVLSESTLHEPMHVFLSMLAGTDNLLSTTTVPKALAIFWFHAGEIAFDACITQMFFIHVAFVAELGILLAMAFDRYVAICALLRYTAVLTPSTIVKLTLAIWGWGIGTIFPIIFLLKRLPYCRTNIIPHSYCEHIGVARLACADITVNIWYGFSVPMASVLVDVAFIAVSYTLILQAVFRLPSQDAQHKALNTCGSHIGVILLFFIPSFFTFLTHRFGKNIPHHIHILLANLYVLIPPMLNPIIYGAKTKQIRDSLAHMLSRVGMS", "length": 315 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "I3LEQ2-1", "protein_name": "All-trans retinoic acid induced differentiation factor", "gene_name": "ATRAID", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARPGFRSPSSLVPRAAALLLVLSVPRALALPEICIQCPGDVQNLSEVALYCKQTPELMLQGRCCLNGKGTILGLDLQNCSLKDPGPDFAQAHTAVIIDLQANPFEGDWANTFRGFTQLQTLILPQGVNCPGGINAWDVVTFYITNQTCQGQRTFATALGTQKRVLRMDLVLLMVLVSCSVFVLMASMATSVCARAHSHCSCSSVFWDPQHYPFPSCFGGLNAEKPRLHEPQRSSY", "length": 236 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "J3QM75-1", "protein_name": "Secretoglobin, family 2B, member 19", "gene_name": "Scgb2b19", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLITGELSFQTTEACVPFFEGYASVVSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLNNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMG8-1", "protein_name": "T cell receptor alpha variable 13N-3", "gene_name": "Trav13n-3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKRLLCSLLGLLCTQVCWVKGQQVQQSPPASLVLQEGENAELQCTYSTTLNSMQWFYQRPGGRLVSLLYSPSWAEQRGGRLTSSAASNESRSSLHISSSQITDSGTYLCAME", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QML3-1", "protein_name": "BTB domain containing 35, family member 29", "gene_name": "Btbd35f29", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHQGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKKVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDALTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMQ9-1", "protein_name": "Predicted gene, 20873", "gene_name": "Gm20873", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRESSSNTLRNIVGRRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYLVKYDGIDSIYGLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFEGKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPGLYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANLSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMS5-1", "protein_name": "BTB domain containing 35, family member 2", "gene_name": "Btbd35f2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEDIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKKVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW5-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADIILKYSPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIMFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QMW9-1", "protein_name": "BTB domain containing 35, family member 6", "gene_name": "Btbd35f6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLSCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYRDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLQTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QN64-1", "protein_name": "BTB domain containing 35, family member 22", "gene_name": "Btbd35f22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDMKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYIDNISFLESEEGLIFQPVFKKLRFQHIIWDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYNEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QNQ5-1", "protein_name": "BTB domain containing 35, family member 24", "gene_name": "Btbd35f24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEGIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKDTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIIYDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP08-1", "protein_name": "Histone H2A", "gene_name": "H2al1k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAKKMQRRRRQKRTRSQRGELPLSLVDRFLREEFHSSRLSSSALSFLTSVLEYLTSNILELAGEVAHTTGRKRIAPEDVRLVVQNNEQLRQLFKPGGTSVNEDDN", "length": 105 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP87-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCNIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNQDEARSLKAYGELPEHAKINETDTFGAGDDDEIVFDDIGDEDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QP96-1", "protein_name": "PRAME like 3C", "gene_name": "Pramel3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMDTKDPPTLLDLATQSLLSNEHAAIQALEEIPRELFVPLFTAAFTGRHKNILTAIVKAWPFACLHIGALSVQEPERELLKALIESLQFLPALNSATRSPKLRILDLRQDAGCKTVCPDISTNSTICFRSCAHSEHSIFKIEGQESLSSSKSEAQPSRLPMELIVDISLDGTLRERNFFALLQNKVEQSLGSLHLCCRDLQINNLCECRHALSHLDLKCVDHLAVDESPLTEVTKLLSHTIQLDSLSLSKIACRSLNGRTFRNFITQLSRMNHLKELSLSSFCLTDHLETVLRVLSADLEFLYLPFCGLSYSDFKFLSECSQVSHLKLLNVNNNPIYWEDCEPFYYLLQNVSSTLQHLKICYCFLTDSTISVLIPALTRCSQLRVLHFYSNQITMGMLMRILELLTPLKELKHVIYPIPVHCYGRWHFQGSLDRQKVEDVQRQLNLMLQEAERSDMNWITYSD", "length": 463 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QPI8-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGWLEAMCFDGVRRLCHIRGKLTKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDQIVFDDIGEDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "J3QQ02-1", "protein_name": "Eukaryotic translation initiation factor 4C", "gene_name": "Eif1ad11", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLESMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNPDEARSLKAYGELPEHAKINEMDTFGPGDDDEIVFDDIGDDDEDIDDI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7GP63-1", "protein_name": "Large ribosomal subunit protein eL39", "gene_name": "RPL39", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL", "length": 51 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "K7N5V5-1", "protein_name": "Predicted gene 5862", "gene_name": "Gm5862", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLEENLIKKKLVILQQESKEVHADWATIHQSLVELNLSGKDEQEKTSNLETQEHQVSEAARELGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPEWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N660-1", "protein_name": "Predicted gene 10220", "gene_name": "Gm10220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRVNVDGRETREGRKDADLPSERNEGRRRWTWRMCMAHRQTTSPVPVKSKKQFEKEEKELIKKIQLTTEETNELRDRLIYVTEGSMNKRPYHRQTRHYKELKLKEKEIMTYLHDLEMKNMEARENNQELKKEKNFYRNLHTRILLGENLIKKKLAILQQESKEIHADWAIIQQRLVELNLSGKDEQEKTSNLEAQENQVSEAARKLGLATAEEDSILQNELPCQEAPAEHHPQHPPSSSDESSSDESSYSTCPSWE", "length": 267 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r168", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSQNGAMKTTEEVALQIVLLCQFGIGTMANILLFVHNFSPLLTGCQLRPKEVICANMAVSSILILFMTVFPNNVFVAQRNLLNDLQCKLEYFVYMVARSTNLCSTCVLSTYQFVTLVPGNFSELMVRGRSPKVISYSCCSCWLFGILYNVYIPMKVSGPQNRHNKTSTKSKWVCFTSGFSVGIVFLSFAHDAIFISIMVWASVSMVRLLYRHYQRLQYIFPPHQGNRGYAEIRAAHSIVLLVVTFVSFYLLHCICFILHIVFVDSNLWLRHIGEVLTSSFPTISPLLLIFRDPSYPCSLIFNYKKPVI", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6B7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Gm10670", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVRGKSLKTTEEVALQIILLCQFGVGTMANDFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTVFPNNMMAFAPRNPPTELKCKLKFFSHLVTRSTNLCSTCVLSMHQFVTLVPISRGKLLLRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSKFFCSTSGFTVRIVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATNTILMLVVTFVSFYLLNFICIIFHTFFIHYNLFIRLLGEILAAGFPTISPLLLIFRDPKNPCLELFHCFKPESLQNLKHRRQLH", "length": 321 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6G6-1", "protein_name": "Predicted gene 16440", "gene_name": "Gm16440", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLCQKENGDEGEIRTTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKITKQRSKINELEELKLDMRKISNDMEEMGGILELYIYEDLNYRMNTEFNIIKSQHEKTMLDMNEMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLSEKVRILLNENRKLLVEQAGTQLSHEEEKRFCEEASKNICASSAKEQQCVNSSRNRNMAQTTT", "length": 218 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6J5-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r127", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLTAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6P1-1", "protein_name": "Reproductive homeobox 2H", "gene_name": "Rhox2h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKRSINYLLDVGPEEDEENANGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATGCAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQCNHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6T9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r175", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGFGTAVNIFLIVHNLSPILNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCFLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVNGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSTNQKLRVHAETRASHTILLLVVTFVTCYLLDCICTVCNISFLDSRVWLRRVKQILDVSFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6U2-1", "protein_name": "Predicted gene 3542", "gene_name": "Gm3542", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCQKENGDEGETRPKKKEEGILSHEKGRRKSFWRRHRSARNTSTQNSNITNQISNINKVEELKLHIRKTSNERKEMCGILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRKLLVEQAGTQVSCEEERGSLRRPARTSVPQVQRNSSFPKCETVQQKLEHGTDHDMISLKEKCWWKRTGCAQEIHHCCLSSLITMAVMGCMLLLYFGFLGMNRP", "length": 270 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W5-1", "protein_name": "Predicted gene 17019", "gene_name": "Gm17019", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALFARLCRLFQRANVDGRDTREGRKDADLPSERNEGRRRWTWRMWMALRQTSSPVPVISKKQFEKEEKKLIKEIQLTTEETNELRDRLIYVTEGSMNKRPYHRQNPLYEKLKLKEKEIMTFLHNLEMENMEAQENKQELKKETHFYRNLHSRLLMEENLIKKKSMTLQQESKEVQADWAIIHQRLVELNLSVKDEQENSNLETPEYQVSEAARELGLATAEEDSILQNELPGQEAPAEHHLQHPQSSSDESSSI", "length": 255 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6W9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r170", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLQNKSVKTTEEVALQVLLLCQVGVGTAVNIFLIVHNLSPNLNGSQQRPIKVILANLAVGNTLILLFAFPNNMTLFVPKDPPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLRGRAPKFVRYICYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKNKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHHRLQHIQSTNQKLRVHAESRASHTILMLVVTFVTCYHLDCICTFCNISFLDSQLWLRRVKQILDASFPTFSPLLLIFRDPKDPCSLLFCC", "length": 304 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r94", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVIFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6X7-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r103", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Y3-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFSPVLTGSKQRPRQVILSHMAMANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPKFVSYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSIILLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFYIHSRLFIRLVSEVLAAVFPSICLHNGVLLSY", "length": 295 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N6Z0-1", "protein_name": "Predicted gene 17026", "gene_name": "Gm17026", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "XRSSWVPKQACCPCSSGYFRERIEYTQTPDQGRRRPAAHHGGKGQETTGHGEGSAGAASPQAPTINDQEKRHERLEKLKRELQNIKNARDELQGILANYTNKDLNDRINFETFMLQMQHDQVMTDLKRMPQDISEALYKCKQLTKENQFYCFRNCHLLIESNLIQHKVRMLRKENRQLLREQIALEECNIETKILCKEGSQKIKDHYTKQQQI", "length": 213 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N701-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r159", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQLLLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMSVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVLVNRGKLILRASVPNLVSYSCYGCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVFLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNTRGQAESKATRTILMLVFTFVSFYLLNFICIIFHTLLMHSHFFIRLVSEVLAAVFPSISPFLLIFRDPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N708-1", "protein_name": "Predicted gene 10128", "gene_name": "Gm10340", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLHENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNTSVI", "length": 205 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N731-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r57", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALNILLLCHVVVGTVGNILLFVHNFSPNLTDSRLRPIQVILINLAVANAFMLLFSTYSYDLIDFVPRKPPTDLKCKLAYFFHMVARGTIMCSTCVLSTYQFVTLVPGNWARVMFREISPKVVSYSCFSCWLFSVLNNAYIPMNVSGPQKSHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFLGIMAWTSVSMVIHLNRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCIIILFHITFVESRLSLRHVTKLLSLSFPTISPLLLIFREPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N744-1", "protein_name": "Predicted gene 8104", "gene_name": "Gm8104", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLRRLFHRENGNQGETRPRQKESAIPSCKNRRMKSFWGRHMSAGKTSSQNCNITNHMKNMNKLDDMKFYIRKINAERLELFRILDIDMNTDLNYRMNIDFTIIKSQHEKTMLDMEKMTQSISDTIEKYKEFIEDKDSYSFTHTYLLKECNQLKEKVRMLLNENRKLLVEQADQETSYGEEKRFCDETSKNIHPKC", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N751-1", "protein_name": "Predicted gene 3696", "gene_name": "Gm3696", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPKKKEEGILSHEKGRRKWLWRRHRSARNTSTQNSKMTKKRSKRNELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPQEHLCPKCQGTAV", "length": 203 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K7N757-1", "protein_name": "Predicted gene 3667", "gene_name": "Gm3667", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKGRRKSFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNEKVRILLNENRRLLVEQAGHKCPVGKKRGSLRKPARTSVSQVPRNSSVK", "length": 205 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7F4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r260", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGNSLKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPTELKCKLESFSHLVVRSTNLCSTCVLSVHQFVTLVPLNRGKGKLVLRASVTNMASYSSCSCWFFSVLSNIHIPIKFSGPQITDNNTDSKRKLFCSTSGFSVGIVFLQFAYDATFMSIMVWTSVSMVLLLRRHRQRMQHILTPNQNPRGQAESKATHTILMLVFTFVSFYLLNCICIIVHALFMHSHFFVRLVSEILTAIFPSISPLLLIFRDPKDPCSVLFNC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r163", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVMTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLKFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPNICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7G4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r242", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSIHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9J7H2-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r256", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILGHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSLLVARSTNLCSTCVLSIHQFFTLFPVSRGKGKLILRASVQNLASYSFYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDDTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAESRATHTILMLVFTFVSFYLLNCICIIFHAFSIHSCLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "K9JA28-1", "protein_name": "Interferon lambda receptor 1", "gene_name": "IFNLR1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSAWRIRVLATLCFLWQPRVHGQLPPPQNVTLLSKDFDMILTWTPGEGSPPDVLYTVRYESKTRMDKWIKVPHCRNIHSVSCNLTCVIPNFFIKFRAQVKATSGRFHSPWVKSQFKEYHLDVELAPPLLNVNVKENVIHVNATFPMAICVESLPWMYDFNLWEAGSEDKKQYKSIFRKKAVTIDTTALRGNYCFNARSSIQSIDFKHSKFSQPVCMQLNYEGEWKFPFSATIPVFVLLILLTSASIIWLLKQDAKHKKMPQTLDLSNCKIAGPTFCCELRENEFLTDCLICTDKPMSQGKKNKTLAQNNQMWMASFLPSSSSEEEEEEEEEDSSSFIPYTEMLQFPRKHFNFQTPRTADAETILDSTSGVLSVVGGSTLDLSALGFSFFPIRKNEMDTSGSQGNEKASHSHSSSLGRISLTDVRFPGPREHGQHGTDSNDCLEVSLLHTLMNSSCTRLPADEHCLYKKDHDFTICYQKPTLDQPVQVSENPLLNEDPSMEKFIYLQTLQVAEDEGFASDCDSGNFTEGTPPASTVLSDELRISDMEKRYDKKFKFKGYQHSHYMRRS", "length": 567 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "L7MU37-1", "protein_name": "Reproductive homeobox 3H", "gene_name": "Rhox3h", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSMKPERSISNWIHSNVEPAGRNLFQVNGHRSALLPELPQDYHRASRSVNGCETKMDSTQGTKVLPAEESRNEEDGGQVESALGATAARGRGKEALNGESPAAAGTAGLVEEDRNKEDGGTKGGEKNEQEVREQIPEHVEGESDQAEAPRQVPRRRLHHRFTQWQLDELERIFRMNYFLSLEARKQLARWMGVNEAIVKRWFQKRREQYRWYKRL", "length": 215 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU51-1", "protein_name": "Olfactory receptor", "gene_name": "Or4a76", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQSNNVTEFVLLGFTQDPAGQKALSVMFSLIYIVTMVGNLLIVGTVIASPSLGSPMYFFLASLSLMDAIYSTAITPKLIVDLLCEKKTISFRACISQLFIDHLFGGVDIVILLAMAYDRYVAICKPLHYLIIMNRRVCILFLVMAWAGGLAHALFQVLAVYNFPFCGPNIIDHFGCDIYPLLLLACTDTYFLGLSIIGNNGAMCIVIFTLLLLSYGIILRFLKNHSQEGRRKALSTCGSHITVVFLFFVPCIFMYVRPVSSFPIDKFITVIYTIVTPMLNPLIYTLRNSEMKNSMEKLLQKTLSPSRIRLSSCCLCY", "length": 318 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU81-1", "protein_name": "BTB domain containing 35, family member 17", "gene_name": "Btbd35f17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANTWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MU83-1", "protein_name": "BTB domain containing 35, family member 18", "gene_name": "Btbd35f18", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGKTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDQVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7MUB9-1", "protein_name": "Reproductive homeobox 2G", "gene_name": "Rhox2g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MERQSINYKLDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLMDNNNQEDLGATGCAQEKEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQSFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL", "length": 191 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X6-1", "protein_name": "F-box/WD repeat-containing protein 15", "gene_name": "Fbxw15", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAIHLPCLPMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKLCQKRWLYCDMDTLQLQGKETWKQFFIDRIWQERAKFRAKAKDFTYKEIPLMCGLFGYACYISGCGLTRKGQDKSVVCMVNSKNTISTWDVHKSVITWKSPEQPASIKLLTTLPEMHIAVTVDIQSTIKLWDCHNREALATNNLKSPCKSLKAVFTKDGPIVLIGDTLGNIHIFRIPDLYLISTVNVLPYGFDGIYCSPQKKWVLLSKKHPHILPKVFYMSSFLRTSEFSAPVSTVLKLSLYERVFWTPRREDRITLMSRSGFPQVKMFETYDIKLEEFGNKRIVKGKLIASFELQCHKVNPQRFGVSDKNVIVCSTESSLLLFDINGLRLKTFQYCPEMIVKLSVDPLHVIVICNTGSMDVYAWEERSLLLRKCYRLHIERPLPLYGFIYKAACDDVSIIQLITDELSLSSLTSYALNICS", "length": 466 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1X9-1", "protein_name": "Demilune cell and parotid protein 1", "gene_name": "Dcpp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSAPEGKNITSIRVFLKGRLIVGIQLNYDDNKDGQVYGSTAGKEMVARLSKEEHIIAAQGTYTPSALTQIIFTTNQPRQLMVGYYVGNSEYSSFPNDPSHVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 171 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y3-1", "protein_name": "PRAME like 51", "gene_name": "Pramel51", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIHSKERKYRLGLLEPGVTAFPCPNMVICLHCPDQDDSLEEVTEECYSPPTLQNLAIQSLLRDEALAISALTDLPQSLFPVIFEEAFTDGHIGILKAMIPVWPFPYLSLGKQINNCNLETLKAMLEGLDILLAQKVQTSRCKLRVINWREDDLKIWAGSHEGEGLPDFRTEKQPIENSPGCEVKKELKVTTEVLRMKGRLDESTTYLLQWAQQRKDSIHLFCRKLLIEGLTKASVIEIFKTVHADCIQELILRCICIEELAFLNPYLKLMKSLFTLTLDHIIGTFTLGDSEKLDEETIFSLISQLPTLHCLQKLYINDVPFIKGNLKEYLRCLKKPLETLCISNCDLSQSDLDCLPFCLNICELKHLHISDIYLCDLLLEPLGFLLERVGDTLKTLELVSCCIVDFQFSALLPALSQCSHLREVTFYDNDVSLPFLKQLLHHTALLSQLIYECYPAPIECYDDSGVILTHRLESFCPELLDILRAKRQLHSVSFQTTKCSKCGGCYIYDRHTQCCRFVEL", "length": 520 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N1Y5-1", "protein_name": "Olfactory receptor", "gene_name": "Or11g25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLSSPSNSSTITGFILLGFAYPREGQILLFVIFFIVYILILMGNASIICAVYCDQRLHTPMYLLLANFSFMEIGYVTSTVPNMLANFLSDTKVISFSGCFLQFYFFFSFGSTECFFLAVMAFDRYLAICRPLHYSSLMTGRLRNTLVTSCWVLGFLWFPVPIIIISQMSFCGSRIIDHFLCDPGPLLALACSRVPLIEVFWSIIMSMLLVIPFLFIMGTYILVLRAVFRLPSREGQKKAFSTCGSHLTVVSLFYCSVMIMYLSPTSEHEAGMQKLVTLFYSVGTPLLNPMIYSLRNKDMKNALQKILRT", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N227-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r125", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSMKTTEEVALQIILLCQFGIGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMSAFARKTPPTELKCKLEFFSHMVARSTNLCSTCVLSVHQFVTLVPVNRGKGKLILRASVPNFANYSCYSCWFFSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N255-1", "protein_name": "Predicted gene 3099", "gene_name": "Gm3099", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSRLLRLCLKGNGDEGETRPKKKEEGILSHEKGRRKLFWRRHRSARNTSTQNSNITNQISNINEVEELKLHIRKISNERKEMCEILNVYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMTQFIIGSMQYSMELIEDNYSYSIKEDHLLRECTQLNKKVRILLNENRKLLVEQAGTQVSCGEEKRFCEEASKNICASSAKEQQLP", "length": 205 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N259-1", "protein_name": "Demilune cell and parotid protein 3", "gene_name": "Dcpp3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFQLEAMLALLILAFLGTPTVLTQDYHGPEVGKHSCTSTPEEKNITSIRVFLQARSIVGIQFNYDDKDGQVYGSTAGKEMVARLSKEEHITGVEGSYSPSALTQIVFTTTQPRQLMVGYHVGIYQYSSYPDDPSFVLKGACVSWRAGGIKSILFLWGSENSSCVKYGHSG", "length": 170 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N270-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSLKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILIHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIHQFVTLVPVNRGKGKLILRASIPNLWNYSCYNCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFAYDATFMIIMVWTSVSMVLLLHRHRQRMQHILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNFICIIFHAFSIHSHLFIRLVSVVLAAVFPSICPLLLIFRDPKDPCSVIFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N273-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r118", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVHDKSVKTTEEVALQLLLLCQFGVGTVANVFLFVHNFSPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMMAFAPKTPPNELKCKLESFSRLVARSTNLCSTCVLSVHQFVTLFPVSRGKGKLILRASVQNLASYSCYSCWFFSVLSNIHIPIRVTGPQITDNNTDSKSNLFCSTSGFIVGIVLQFAHDATFMSIMIWTSVSMILLLHRHCQRMQDILTPNQNPRGQAETRATRTILMLVVTFVSFYLLNCICIIFHAFFIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSLLFKC", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N275-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r169", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKSVKTTVEVALQILLLCQVGVGTVVNIFLFVHNLSPFLNGSQQRPIKVILANLALGNTLILLFAFPNNIRVFIPREFPTDLKCKLGYFIWLVARSTNMCSTCSLSTYQLVTLAPGTWGRVMLHGRAPKFVRYTCYSCWLFSVLNNAHIPMKVSGPQKTHNDTNTKSKWVCSTTGFSIGMRILSFAHDAVFISIIIWSSVSMVILLNRHHQRLQHIQSPNQKLRFHAETRAAHTILMLVVTFVTCYLLDCICTSLHISFVDSRVWLRRVKEILAVSFPTFSPLLLIFRDPKDPCSLPFSC", "length": 304 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N288-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r151", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSDHGKSVKTTEEVALQILLLCQFGVGTLANVFLFVHNFYPVLTGSKQRPRQVILSHMAVANALTLFLTIFPNNMIAFAPKTPPTELKCKLEFFSHMVARSTNLCSTCVLSIYQFVTLVLVNRGKLILRASVPNFVSYSCYSCWFFSVLSNIHISIKVTGPQITDNNTDSKSNLFCSTSGFIVGIVSLQFAYDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQYRRGQAETRATRTILMLVVTFVSFYLLNFICIIFHTLLMHSHLFIRLVSEVLAAVFPSISPLLLIFRGPKDPCSVLFNC", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2A6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r116", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFFHNFSPVLTGSKQRPRQVFLSHMAVANALTLFLTIFPNNMSAFAPKTPPNELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLAAVFPSICPLLLIFRDPKDPCSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2B4-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r128", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHGKSVKTTEEVALQILLLCQFGVGTVANVFLFVHNFSPVLTGSKKRPRQVILSHMAVANALTLFLTIFPNNMSAFAPKTPPTELKCKLEFFSHMVARSKNLCSTCVLSIHQFVTLVPVNRGKGKLILRASVPNLWNYSCYSCWFYSVLSNIHIPIKVTGPQITDNNTDSKSNLFCSTSGFIVGMVFLQFSHDATFMTIMVWTSVSMVLLLHRHHQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNCICIIFHAFSIHSRLFIRLVSEVLGAVFPNICPLLLIFRDPKDPFSVLFKC", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N2C2-1", "protein_name": "Predicted gene 2974", "gene_name": "Gm2974", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSWLLRLFQKENGDEGETRPTEKEEGILSHEKERRKWFWRRHRSARNTSTQNSKMTKKRSKINELEELKLDMRKISNDMEEMCGILNLYMYEDLNYRMNTEFNIIKSQHEKTMLDMNKMIQSIIGSMQYSKELIEDNYSYSIKEDHLLRECTQLNENVRILLNENRRLLVEQAGHKCPVGKKRGSLRRPARTSVSQVPRNSSVI", "length": 205 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "L7N474-1", "protein_name": "Spermatogenesis associated glutamate (E)-rich protein 1E", "gene_name": "Speer1e", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "ARRHTSSTAPDLSKKEFKKEKERLTTELHLLIQLRNEQRDHLIDFKESSNYNRTKPTQKKNPFYEQLRSTKNQVLSSVHKLEMGIIEAQENIQELNKWIDYFTNLHSQLLMEKNLKMSITQNQKNKEVEIDWALIEKYLVDVNLNGRTGADQQP", "length": 154 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0QWR4-1", "protein_name": "Aly/REF export factor family member 14", "gene_name": "Alyreffm17", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADKMDMSLEDIIKLTKIQQRRHDRPDSRVNRGTGSKRYRPAFTHGGRNRLAPYCRPKQLPDKWQHDLFIGGFRGQNHVDTGGKLFLSNLHFGVSDADIQLLFAEFGTLKKSAVHYDRCGRSLGTAQVHFERKADALKAMREYNGAPLDGRPMNIQLATSQIDRQGRPAQSKNRGGMTRNPGSGVLSGGGTKKWTLGGSQGRGRGTIRNSKLQQQQQQQKQKQQQQQQKQQQKQQQKQQQQLSAEELDAQLDAYQEMMDTS", "length": 261 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "M0R3T3-1", "protein_name": "Peptidase S1 domain-containing protein", "gene_name": "ENSRNOG00000067174", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRFLVLCLILSLGDYGAFPLIQSRIHRGCKGERHSQPWQVAMYHYDKAVGWGWHPSPTTMSTSPSHNKVRLGQHSLDADGDTGQDVPVRHSIPHPLYNRSLQMPTFLSPDADNSHNLMLRQLREPANTTEAVRVTEEPTEEAKLGSRCLASGWGSTRPDKCMPGMLQCVDLTLMSSDVCTYAYSQRVTESMLCAGHQEGSRDTCMGDSGTTLICDRMLQGITSWGGNPCA", "length": 230 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R777-1", "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "Smokwl5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MASKSKEKTLGSHYKILSYLGQGSFGTVNLAWHLKTQALVAIKMLEISKETISSILSERAILETLHHPNIIRLFQVLITSSHVNFVLEYAPGGSLFELIKEGGPLQEEVAKKIFGQTVSAVKYCHNLDIVHRDIKPQNILTDAEGNGKLTDFGLATKFRPGTLLKELCGTKEFYAPELVLREPYNGKKTDVWSLGVLLYFISTGYCPFRGVTTKDMEKKIATGTYTIPTYFSGQLENLIHQILTVSPEMRPSIEDIEKHPWVRKCEVNIPTITCPDYKIVEMLCGMGYNANKILESLQKKKYDEPMAAYLILKDKVRQEIEHGTTTSDMPVDQGPLPPQSPAHHSVSGLPLKRRASEPNFGLLHIWPPGEQVARHNVARSVSMPPIALYGTKKQNSTSTSALHSRPVASPCVCNTILEIEIPLPTKQDFDMKTSSPPQRIGYFQRLCQRIRDCLSRLCCFLWAPKVHSPRKWLP", "length": 474 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9M1-1", "protein_name": "Olfactory receptor family 52 subfamily N member 1B", "gene_name": "Or52n1b", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSLLNVSSLTPASLILNGIPGLEEVNLCIFFPLFTMYSIALTGNFGLIYLIYSEEVLHRPMYIFLALLSFTDVLMCTSTIPNTLFISWFNFKKIDFKACLAQMFFVHTFTGMESGVLVLMVLDLYIAMCYPLRYATILTNVVIAKAGMLTFLRGVALVIPFIFLTKRFPYCKGNVIPHTYCDHISVAKISCGNVQINAIYGLMVVLLIGDFDIPCITVSYTMILWAAVSLSSADARQKAFSTCTAHICAIVITYVPAFFTFFTHRFGWHTIPSHIHIIMANLYLLMPPTMNPIVYGVKTKQIQKRVIRFFFKGRENSSHKF", "length": 321 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0R9X6-1", "protein_name": "Paired immunoglobin-like type 2 receptor beta 1 like 2", "gene_name": "Pilrb2l4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAWILLLLLLAACLHTGNSAGYQKTQDYGVNQPEQLTGIQGGSIEIPFSFYFPWELAKDPQMSIAWRWKVFFGEVIYNSTLLFLHEHFKGRLIMNWTQGQTSGVLRILNLKANDQSTYFSRIFLQATEGMKLWQSRAGTKLIIHALSTTMASPSIIPSAVPTAGLENTRGQRNPSLLNLGAMVGMVMAKVVVIIPLYGWVIFLWWKQRLPTARISHQVSLHHTPCIPQSSMSSLWESELVAAGFSCESHSWITPTSAMGARIPSPWNQGPPVCLWA", "length": 289 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RAD6-1", "protein_name": "Olfactory receptor", "gene_name": "Or1f19f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTNQSSVSEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILVISTDSHLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILSSQAISFSGCLTQLYFLCVSVNMDNFLLAVMAYDRFVAICHPLYYTTKMTHQLCVLMVSGSWVTASLNALLHTLLMARLSFCGDNIIHHFFCDVTPLLKLSCTATNLNELMILTEGAVIMVTPFVCILISYIYITNAVLRVSSFRGGWKAFSTCGSHLAVVCLFYGTIIAVYFNPVSSHSSEKDTAATVLYTVVTPMLNPFIYSLRNNDLKGALRKVVHRKI", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RBH5-1", "protein_name": "Surfactant associated 2", "gene_name": "Sfta2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPSMCLFLLLTLLCSSLAGPTKVTLQVKLTEASQAKTSQDSGFLDMLQKICLLLHLSPGTNVTLHHKGPPHHLTCRA", "length": 78 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCJ6-1", "protein_name": "EF-hand domain-containing protein", "gene_name": "AABR07013776.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MADQLTEEQIAEFKEAFPLFDRDGDQTVTTKELGMVMGSLGQNPTEAELQDMISEVDADGNGTINFPEFLTMMARKMKGTDVEEEIREAFRVFDKDGYTSAAEFRHVMTTLGEKLTDEEVDGMIREADMDGDGQVIYEEFVQMVTAK", "length": 147 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCP1-1", "protein_name": "Leukocyte immunoglobulin like receptor B3", "gene_name": "Lilrb3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVSTLTALAYLGLILGSENPVLSGAFTKPTIKMVPSNVVTTGKQVTIFCEGSSHAKEYRLHKEGSPDYLTPTTFLETENKAKFSISPIQWNNAGQYWCSYRSLTNKLRQSDIMELVVTGVILGEVTLSALPSYVVTSGRNVTLQCASQVVYDRFILMKEDEKFSTAMPSWKIYPVLWGAIFTLGPVTSNQRWRFTCYGYYLSSSLIWSKPSNHLELLVSGTLHKPILWAHPGSMVTSGSPVTIWCEGDQETQTYVLYRQGSLESWNRQTQKDYNNKAEFTIPSVTYLNAGHYFCYSYTSAGWSEHSDTLELVVTGVYKKPIFLALKNPIVNLGVTVTISCTSNQSFNCFLLMDDDQKIYRFFDLQYSYSGESLARFQVGPITSRQRWRFRCYGYYTDNPQVWSEASDPLDFLVSGNLQKPTLWAEPGSVIESGNSVTIWCEGTMETQIYFLYKEGSPSSWLRQTPKEPGNKAMFFIAFMEKHNAGQYRCYCYNFGGWSQHSDTLELVMTGVHHGKPTLSAFPSPMVTSGGNVTLYCASSTIYDWYIVTGQDLKFSRFQRAQFIPTEMSQALFSEISVASRKKGPFRCYGFNESTPHLWSEASNPLEIHVSGVSRKPSLLNQQGPVLAPGENLTLRCSSELSYDRFSLSKEGRSDLPQLSVSQSQTGEYYANFFLYSVDFSIAGQYRCYGASRFSSEWSAPSVPQDILVTGHPPITPSLSVNPGTIVSSGENVTLLCQSSIPMDTFFLFKKGDAYPYMHQRLKFQGPQCKAEFSLSAVTPNIGGIFTCFGSQSSSPYLLSHPSVPVEIKVSGLAKYQKSLIWVSVVFFLLFFVLTLFFFLRLWHQNKHRKGVQTKIDLQHPEGAVEPKSIVGHLQKSSRPAPAIQEEILCEKRWPGREITEVSASDATVKVTRSADNVELGILSQHQDDPSIHLYAQVKPARLRRAQTTSSSLFPKELQHSKHRQKNRDQVIDQQADTSQDSHAVIYAQLHIMTPRQGRQTSLFPGRIC", "length": 1008 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCQ2-1", "protein_name": "G-protein coupled receptors family 1 profile domain-containing protein", "gene_name": "LOC100361204", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQSSIP", "length": 328 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCW7-1", "protein_name": "Uncharacterized protein", "gene_name": "Pilrb1l3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALLVSLPEQNLAMAQLLLLLLSAACLHTGNSAGYPKKNVFSVDQPAVLSGVQGGSIEISFSFYFPWELAKVPQMSIAWRWKNYHGEYIYNSTQPFIHEHFKGRLIVNWSQGQTSGVLRILNLKENDKATYFSRVFLPTTEGMKSWQSVAGTQLIIIHAPSTTVVSPSIIPSVVPIAGLEDTRGKRTPSLLNLGAMVRMVVSKVVVIIALYGWVIFLWWKQRSAWSLLSFLTTWKSEEQMQMNTAPAPKEFK", "length": 252 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RCY4-1", "protein_name": "Retinoic acid early-inducible protein 1 domain-containing protein", "gene_name": "AABR07000137.1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSAPLGSLGRKSKNQSLGLDMLGTVLSTDSLSCTFTVKYRSSPGQCSVNGKPLLLFNDERQNSPVGKPEKKGNATKVCAELNQSLKDIFQKMMNLESWLFESKGNHTLQVTVQSQYNQGIFMDGCWVFTIDRQYPFYFYPKIMTWRESHPDASRTVSQWQNNRQVAQSLRTCSMGDFSQCLRKLLTDSREVPRSTITTLDPTQPSSAIQIPPTVDSASSVFTTWSQYIFVLILCLAILIINALIP", "length": 246 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RD07-1", "protein_name": "Uncharacterized protein", "gene_name": "ENSRNOG00000064269", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRMMAMQMMTNSISDAMERYKELIQVNSSYNIRQSQLLREQAQLKNNIQILLNEKRELLVEETELPASSVEAKRLCEEAGMNICDPRAKQQQV", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M0RDP5-1", "protein_name": "Zinc finger protein 353", "gene_name": "Zfp353", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDVAETPGASQTVPCNTQPSPVESSQLVSGQSSEMPTWKKTVMASACCNPQETACTQNSTAHPGKASDFYFGEPSETASFIQQVVSAEQKSSPAGSCLMNLSSTTKSCLSHPLKTEVLDTRKTLCNEGHWGRTLNSDKTLLIQITTMYESQWRTLGNHPVAPSGYHEGQAPNMDHLVDSVSNQTFIGDLEMEPSCNHVLYTDQFITSFSEQNPFGDQQRSPVADNRFYADQKILPNGYQTFYEPQMSTNYQITCVCGQNVCRCQEILLSGEHLLSEYQTSGYRYDQDLIVNLQVTSPIGGEPLHDSQIPNSNFDTTSCGTKRTTSSEEDNLAWHPETSLSSEETFLDQMRTSVDQNVYPSHNGTLKIEESLEPQVTSLSNQAPYVGESSDTSNSPLIQIQPQEISSASGLDQGQHPEIKLDLKTQSPVSLKNPHNSKRYCCTYQGCKKSYKKSQHLKDHMKKHTGVKPYMCNKPGCDWKFFRLVDLNRHKQKHSGERPYPCPMCNKNYSRFYYLKQHLRSHIQASPTTAT", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "M9MSI7-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG42818", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MFIHQREQLPFKHNEQDPNYLAPVIQKRKPMDKDPRNPLKRLKFLQEFPTQSSKGDLDDLKYPTQLEGRHDSPKYDKTFHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIESHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREIASKLILQWAENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARIVLNKWIETQKSLIDSFSQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVNIMGNLIKGLRNIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHPTTSTYEVTNIITDESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSDTKNITSTTYSTGDSKSFQPTATTPDSTDRSSSQPITFPESTTSTTNLQSTITNHLSTESTSSQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHSTPYLSTREITVFQFNDVENINPIISNNSTTVTTNIHSSTYTTSTTDNTTSYPNLSTTESSPTFDSTISHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIVAGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQNNTIFSTTYSTIFSTTQSISTTSPTQYALTSSTPNTSTTSHSSTPSSINNLRSDESNNHQPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREIQKRNSDVKEDKIHHYKADKFIKNPKNGNQDSHIPKPILNSARSKIKDVPLKLSAIKVNGGLKHLPSKRKANEEVSAMHEIFPEPVSILPHK", "length": 1085 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "O08640-1", "protein_name": "Keratin-associated protein 14", "gene_name": "Krtap14", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSCNSCSGTFSQSFGGQLQYPISSCGSSYPNNVFYSTDLQTPITHQLGSSLHSGCQETFCEPTNCQTAYVVSRPCQRPFYSQRIRGPCRPCQSTFSGSLGFGSRGFQSFGCGYPSQGFGSHGFQSVGCGTPTFSSLNCGSSFYRPTCFSTKSCQSVSYQPTCGTGFF", "length": 167 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O21032-1", "protein_name": "Large ribosomal subunit protein uL16m", "gene_name": "mrpl16", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIPNRQKFTKNHKRNLITKETRKTGLVLGNYGIKATETGYLKMKQMERIKGDLVKKLKDNMDIYFNFYPLFGLTNKGTARMGAGKGEVSEWYVLVKKGSIVVEFIKSRMTAGAMQKVIRYSANKWPIKVRMTQIKQGLYEKKI", "length": 144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21042-1", "protein_name": "Cytochrome c oxidase subunit 1+2", "gene_name": "2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKILEIYDKQIAEKEGNIFIFISKWIISVDHKNIGTMYTNFSILAGIVGTLLSLVIRMELSTGNMLDGDGQQYNVIVTAHGLIMIFFVVMPAMLGGFANWFIPIMVGSPDVAFPRLNNISLWLIIVSFFLLLTSSCVGIGVGTGWTVYPPLSTMEYHPGHAVDVGILSLHIAGASSLLGAINFLTTVFNMKIAGLSWSKVSLFVWSILITAVLLVLSLPVLAGGLTMLITDRNFETTFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGLVSIILSKYSNKGIFGVKGMISAMSAIGFLGFLVWAHHMYTVGLDVDTRAYFTAATMIIAIPTGIKIFSWLATLWGGVIKITTPMLFVIGFLVLFTIGGLTGVVLANGGLDISLHDTYYVVAHFHYVLSMGAIFAIFAGYYYYYSIMNSTRLFGVVRYNEQLGRIHFWTMFIGVNVTFFPMHFLGLAGMPRRIGDYPDAYIGWNLIASYGSLITAFGLLFFVVNIFTPYIRRSVNIKNGAIILMGLDFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDEIINPTVTIKIIGHQWYWSYEYGDNASNLIEFDSYMVYERDLAEGQLRLLEVDNAMVVPVKTHIRLIITSGDVLHSWAIPSFGIKVDAVPGRLNQIGLYVKREGTFYGQCSELCGVDHGFMPIKVQAVKLGEYFSKLNEK", "length": 764 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O21049-1", "protein_name": "Cytochrome c oxidase subunit 3", "gene_name": "cox3", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKGFFENLFRQNVRSVINTGKKVGARAAAREIINQEWGYPLANHEVLFLTNVYQPKHMKRHPFHIVRGTVAPLAVTLPLGFFVLNYFGVISSKLGLLIALSSFIGGLVIWTISIIFDSLYDQQHTYEVKRGLVMGMMMFIISEVMFFFSFFWSYFYISLSPNIAIGCVWPPYGLTVYSYMGLPLLNTVLLLLSGAILTDGYTILTEQKAVHEKNEKVLAVEEAFKNLMNLYKTKNSINTLTFVDERRDKFFGKESRQEDKIAEQKLIAISAGVKELRDLDWDLYFFENPENIEPNYKEPTNLSVIEYALITIYLKKRNKVIKTRLYFTLLCAVVFLACQGYEYFFAPFSMNDGIYGSLFFLLTGFHGFHVLVGSILIGIITIRFIVGNFNLLNVGTNFQIYKNKSTGFACTLFYWHFVDIVWIFLYIVIYWWGSR", "length": 435 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "O23373-1", "protein_name": "Formin-like protein 3", "gene_name": "FH3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MGRLRLAFLAISLVVFVCVSEEIFSRGGLNLLRFSVYGEDVAEQTWIHQNPRRKLISYPKKFSVSAPNLAFGPAPSFAPGPGPSFAPGPAPNPRSYDWLAPASSPNEPPAETPDESSPSPSEETPSVVAPSQSVPGPPRPPPQREKKDDILMKLIIAVASTAVLTFVFVALMFLCCFKRNCNNAVGSRDGPRDEGPLLRLSTGSTENSPTVASTSRKMFSVASSKKRSFLSRVSLKRNGHEFSTAESSSAAGLPPLKLPPGRSAPPPPPAAAPPPQPPPPPPPKPQPPPPPKIARPPPAPPKGAAPKRQGNTSSGDASDVDSETGAPKTKLKPFFWDKMANPDQKMVWHEISAGSFQFNEEAMESLFGYNDGNKNKNGQKSTDSSLRESPLQYIQIIDTRKAQNLSILLRALNVTTEEVVDAIKEGNELPVELLQTLLKMAPTSEEELKLRLYSGDLHLLGPAERFLKILVDIPFAFKRIESLLFMISLQEEVSGLKEALGTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFRGDAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGVRALRLQSRSFSSVKTDDSNADSSPQSVERYRSTGLQVVTGLTTELEDVKRAAIIDADGLAATLANISGSLTNAREFLKTMDEESDFERALAGFIERADADFKWLKEEEERIMVLVKSSADYFHGKSAKNEGLRLFAIVRDFLIMLEKVCREVKETTKTTNHSGKKESEMTTSDSNQPSPDFRQRLFPAIAERRMDSSDDSDDEEDSSPS", "length": 785 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O35698-1", "protein_name": "RNA-binding motif protein, Y chromosome", "gene_name": "Rbmy", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQARRPSSLESGSKKRPPSFSRTRGASRILKCGRGGRSRARSGPSCEGNLGGDRYTPNFNVSSSGRHFAVKRNPSSKRDDPPSKRSATSAQTRSNTGLRGREPHRREISRNMPRGEPASSRRDEYPLPRDYGQSSNDRKYESTSRGYCDYGNYHSREESASKVFSDHAGYLGGRDRDFSEYLSGNSYRDTYRSYGRFHEAPSARGGNNRYDDYSNSQDGYGGRGEPYISNRSNIYSSDYERSGRQEVLPPPIDREYFDREGRQERGHSPKDGLYSASRESYSSNTKIWGIPWRSWRKQI", "length": 380 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O60309-1", "protein_name": "Leucine-rich repeat-containing protein 37A3", "gene_name": "LRRC37A3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTSAQCPALACVMSPLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPEPWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGELPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGIIHQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESSREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESMTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQLPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLIVPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIIEPEEPSDSSGINLSGFGSEQLDTNDESDVTSTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGKNRQRLNRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENTAEEKRLGSPAPRELKQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNMKTSKPIVHSRKKYRFHKTRSRMTHRTPKVKKSPKVRKKSYLSRLMLSNRLPFSAAKSLINSPSQGAFSSLRDLSPQENPFLEVSAPSEHFIENNNTKDTTARNAFEENVFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSVIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLVSRTGHLMKLLSGQQEVKASKIEWDTDQWKTENYINESTEAQSEQKEKSLEFTKELPGYGYTKKLILALIVTGILTILIILLCLIEICCHRRSLQEDEEGFSRDSEAPTEEESEALP", "length": 1634 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "O80489-1", "protein_name": "small monomeric GTPase", "gene_name": "SARA1A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALANVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYIK", "length": 193 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80614-1", "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSDMRDERFFYHRYLSVTNRTTPTTATNLPTSTSNMRSTSLMTPRVAHTSMSSGGDFPDDRFFHARHQSATDRAASNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQASMSARETVPSSTSTRSMQTSTSTPEIMPTSSRNVITSSEEVANTFTQTSYIQFGSLWETNTTPSTRSWPTVPSSNSPRVLQTSMSRRGTSPMSSSTRRNVQSSMSGRETVSSSTSTSSMQTSMSTPEIMPTSSRNVITRSEEVANTFSTQTPYIQFGRLWETNTTSSTRSRTTVPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSSSMSTVEIMPTSARNMITMSEEVANSFTQTSYIQFGSLWETFKTVTKLSRVAMVENGECVICLEEWRKETYVTSSTSNMRTSSLMTLTRFIDEQISLRATVSSTRTTARLLTNESPATIRAVAMLPRVAMVEKGECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQCRYKLSCVYKSFLML", "length": 535 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O81153-1", "protein_name": "Proteasome subunit beta type-3-B", "gene_name": "PBC2", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEVKERILKGRMD", "length": 204 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P00757-1", "protein_name": "Kallikrein 1-related peptidase-like b4", "gene_name": "Klk1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMANNP", "length": 256 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P01241-1", "protein_name": "Somatotropin", "gene_name": "GH1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P02762-1", "protein_name": "Major urinary protein 6", "gene_name": "Mup6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04071-1", "protein_name": "Kallikrein 1-related peptidase b16", "gene_name": "Klk1b16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MWFLILFLALSLGGIDAAPPVQSRIVGGFKCEKNSQPWQVAVYYHKEHICGGVLLDRNWVLTAAHCYVDECEVWLGKNQLFQEEPSAQNRLVSKSFPHPGFNMTLLTFEKLPPGADFSNDLMLLRLSKPADITDVVKPIDLPTKEPKLDSTCLVSGWGSITPTKWQKPDDLQCMFTKLLPNENCAKAYLLKVTDVMLCTIEMGEDKGPCVGDSGGPLICDGVLQGTVSIGPDPCGIPGVSAIYTNLVKFNSWIKDTMMKNA", "length": 261 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P04644-1", "protein_name": "Small ribosomal subunit protein eS17", "gene_name": "Rps17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKNLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAV", "length": 135 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P05817-1", "protein_name": "Prestalk D11 protein", "gene_name": "ampA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKLILLLILSSCLVLSVKSEVNVDCSLVRCAQPICKPHYRLNMTDSCCGRCEPCTDVACTLQVKYCQDGEVPTGCCPCTLPPTKPDCSLVKCARPVCKPYYRLNMTDSCCGRCEPCTGVACTLQIKYCKDGEVPTGCCPCTPQPTKKPDCSKVPCPKILKYCQEGELPTGCCPCTPQPTKKPDCSRVPCPKILKYCKEGELPTGCCPCTPQPTKKPDCSDVMCTMDIRYCKNGELPTGCCPCTPQETKVPDCSKAMCTMDIKYCKPGEKPFGCCPCRENLTQ", "length": 284 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P06325-1", "protein_name": "T-cell receptor gamma chain V region 5/10-13", "gene_name": "Tcrg-V1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLLLRWPTFCCLWVFGLGQLEQTELSVTRATDESAQISCIVSLPYFSNTAIHWYRQKAKKFEYLIYVSTNYNQRPLGGKNKKIEASKDFQTSTSTLKINYLKKEDEATYYCAVCRSGTSWVKIFAKGTKLVVIPP", "length": 135 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P06349-1", "protein_name": "Histone H1t", "gene_name": "H1-6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSETAPAASSTLVPAPVEKPATKRRGKKPGMATARKPRGFSVSKLIPEALSMSQERAGMSLAALKKALAAAGYDVEKNNSRIKLALKRLVNKGVLVQTKGTGASGSFKLSKKAASGNDKGKGKKSASAKAKKLGLSRASRSPKSSKTKVVKKPKATPTKGSGSRRKTKGAKGLQQRKSPAKARATNSNSGKSKMVMQKTDLRKAAGRK", "length": 208 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P07628-1", "protein_name": "Kallikrein 1-related peptidase b8", "gene_name": "Klk1b8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRFLILFLALSLGGIDAAPPLQSRVVGGFNCEKNSQPWQVAVYDNKEHICGGVLLERNWVLTAAHCYVDQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLTLKEIPPGADFSNDLMLLRLSKPADITDAVKPITLPTKESKLGSTCLASGWGSITPTKWQKPDDLQCVFLKLLPIKNCIENHNVKVTDVMLCAGEMSGGKNICKGDSGGPLICDSVLQGITSTGPIPCGKPGVPAMYTNLIKFNSWIKDTMTKNS", "length": 261 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P07647-1", "protein_name": "Submandibular glandular kallikrein-9", "gene_name": "Klk9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWFLILFLALSLGQIDAAPPGQSRVVGGYNCETNSQPWQVAVIGTTFCGGVLIDPSWVITAAHCYSKNYRVLLGRNNLVKDEPFAQRRLVSQSFQHPDYIPVFMRNHTRQRAYDHNNDLMLLHLSKPADITGGVKVIDLPTEEPKVGSICLASGWGMTNPSEMKLSHDLQCVNIHLLSNEKCIETYKNIETDVTLCAGEMDGGKDTCTGDSGGPLICDGVLQGLTSGGATPCAKPKTPAIYAKLIKFTSWIKKVMKENP", "length": 259 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P08932-1", "protein_name": "T-kininogen 2", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKLITILLLCSRLLPSLAQEEGAQEMDCNDETVFQAVDTALKKYNAELESGNQFLLYRVTEGTKKDGAETLYSFKYQIKEGNCSVQSGLTWQDCDFKDAEEAATGECTTTLGKKENKFSVATQICNITPGKGPKKTEEDLCVGCFQPIPMDSSDLKPVLKHAVEHFNNNTKHTHLFALTEVKSAHSQVVAGMNYKIIYSIVQTNCSKEDFPFLREDCVPLPYGDHGECRGHTYVDIHNTIAGFSQSCDLYPGDDLFSLLPKKCFGCPKNIPVDSPELKEALGHSIAQLNAQHNHLFYFKIDTVKKATSQVVAGTKYVIEFIARETNCSKQTNTELTADCETKHLGQSLNCNANVYMRPWENKVVPTVRCQALDMMISRPPGFSPFRLVQVQETKEGTTRLLNSCEYKGRLSKAGAGPAPDHQAEASTVTP", "length": 430 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C0S7-1", "protein_name": "Histone H2A.Z", "gene_name": "H2az1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGGKAGKDSGKAKTKAVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTV", "length": 128 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C2B7-1", "protein_name": "Large ribosomal subunit protein mL52", "gene_name": "MRPL52", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAALGMLLSTGVRRLHCGSAARAGSQWRLRQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAQREKFARRVVLLSQEMDAGLQAWQLRQQEKLQEEKRKQQNALKPKGVLLQNPGPSQ", "length": 124 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P0C644-1", "protein_name": "Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1", "gene_name": "Ppip5k1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWSLTANEDEDESATAHFFLGAGDEGLGTCGIGMRTGESDSELLEDEEDEVPPEPQIIVGICAMTKKSKSKPMTQILERLCRFDYLTVVILGEDVILNEPVENWPPCHCLISFHSKGFPLDKAVAYSKLRNPFLINDLTMQYYIQDRREVYRILQEEGIDLPRYAVLNRDPACPEECNLIEGEDQVEVNGAVFPKPFVEKPVSAEDHNVYIYYPSSAGGGSQRLFRKIGSRSSVYSPESSVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVMLTAMEKLVARKVCVAFKQTVCGFDLLRANGHSFVCDVNGFSFVKNSMKYYDDCAKILGNTIMRELAPQFQIPWSIPTEAEDIPIVPTTSGTMMELRCVIAIIRHGDRTPKQKMKMEVTHPRFFALFEKHGGYKTGKLKLKRPEQLQEVLDITRLLLAELEKEPGAEIEEKTGKLEQLKSVLEMYGHFSGINRKVQLTYYPHGVKASSEGQDLQREPPAPSLLLVLKWGGELTPDGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQHRVKARLHHILQQDAPFGPEDYDQLAPTGSTSLLNSMSVIQNPVKVCDQVFALIENLTHQIRERMQDPSSVDLQLYHSETLELMLQRWSKLERDFRQKSGRYDISKIPDIYDCVKYDVQHNGSLGLQGTAELLRLSKALADVVIPQEYGISREEKVEIAVGFCLPLLRKILLDLQRTHEDESVNKLHPLYSRGVLSPGRHVRTRLYFTSESHVHSLLSVFRYGGLLDETKDAQWQRALAYLSAISELNYMTQIVIMLYEDNTRDPLSEERFHVELHFSPGVKGVEEGSAPAGCGFRPASSENEEMKTDPGSIENLCPAKPSDEPDRALQTSPQPVEGTGLPRRSPLIRNRKAGSMEVLSETSSSRPGGYRLFSSSRPPTEMKQSGLGSQCTGLFSTTVLGGSSSAPNLQDYARTHGKKLPPAGLKHRDELLFVPAVKRFSVSFAKHPTNGFEGCSMVPTIYPLETLHNALSLRQVSEFLTKVCQRHTDAHAQASAALFDSMHNHQASDNPFSPPRTLHSPPLQLRHRSEKPPWYSSGPSSTVSSAGPSSPTTVDGNSHFGFSDQSSVNTQMIEEKQGLGLLQETPGDGTPEFHIELAESTQSPQEPPVEISPPGSQDDTEVNQTCQEVPDTIQPCHDILEEIGQPNQEVPDISQLLLKNHDTATNTCQPCQASQLSKKVYEEICQLCQDNPEESNQLCQEVSVELGRMVHRFPVSIGSTTQETLMEIGRPTQEIPEEPCQEFSEKVGMLTQKASAISELSQDILETDNPSQELSEETDLQAQEVSEEIDQEPEVVDELSNEDIS", "length": 1434 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P0C7H9-1", "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7", "gene_name": "USP17L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLGGDWQFNHFSKLTSSRLDAAFAEIQRTSLSEKSPLSSETRFDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALHSPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATQESTLDHWKFPQEQNKTKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTKPTDQESMNTGTLASLQGSTRRSKGNNKHSKRSLLVCQ", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0CW02-1", "protein_name": "Lymphocyte antigen 6C1", "gene_name": "Ly6c1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDTSHTTKSCVLILLVALLCAERAQGLQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMAGVLLFSLSSVVLQTLL", "length": 131 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DKL4-1", "protein_name": "Spliceosome-associated protein 130 A", "gene_name": "SAP130A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DKL6-1", "protein_name": "Spliceosome-associated protein 130 B", "gene_name": "SAP130B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGAIRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYVAVDPKGRAVMIGACEKQKLVYVLNRDTTARLTISSPLEAHKSHTICYSLCGVDCGFDNPIFAAIELDYSEADQDPTGQAASEAQKHLTFYELDLGLNHVSRKWSNPVDNGANMLVTVPGGADGPSGVLVCAENFVIYMNQGHPDVRAVIPRRTDLPAERGVLVVSAAVHKQKTMFFFLIQTEYGDVFKVTLDHNGDHVSELKVKYFDTIPVASSICVLKLGFLFSASEFGNHGLYQFQAIGEEPDVESSSSNLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPLMDMKVLNIFEEETPQIFSLCGRGPRSSLRILRPGLAITEMAVSQLPGQPSAVWTVKKNVSDEFDAYIVVSFTNATLVLSIGEQVEEVNDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKRSIVKVGYNRLQVVIALSGGELIYFEADMTGQLMEVEKHEMSGDVACLDIAPVPEGRKRSRFLAVGSYDNTVRILSLDPDDCLQILSVQSVSSAPESLLFLEVQASIGGDDGADHPANLFLNSGLQNGVLFRTVVDMVTGQLSDSRSRFLGLKPPKLFSISVRGRSAMLCLSSRPWLGYIHRGHFHLTPLSYETLEFAAPFSSDQCAEGVVSVAGDALRIFMIDRLGETFNETVVPLRYTPRKFVLHPKRKLLVIIESDQGAFTAEEREAARKECFEAGGVGENGNGNADQMENGADDEDKEDPLSDEQYGYPKAESEKWVSCIRVLDPKTATTTCLLELQDNEAAYSVCTVNFHDKEYGTLLAVGTVKGMQFWPKKNLVAGFIHIYRFVEDGKSLELLHKTQVEGVPLALCQFQGRLLAGIGPVLRLYDLGKKRLLRKCENKLFPNTIISIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFADDCVPRWLTASHHVDFDTMAGADKFGNVYFVRLPQDLSEEIEEDPTGGKIKWEQGKLNGAPNKVDEIVQFHVGDVVTCLQKASMIPGGSESIMYGTVMGSIGALHAFTSRDDVDFFSHLEMHMRQEYPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPAEILKKLEDARNKII", "length": 1214 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P0DML3-1", "protein_name": "Chorionic somatomammotropin hormone 2", "gene_name": "CSH2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEETYIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLRSMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF", "length": 217 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DMV2-1", "protein_name": "Cancer/testis antigen family 45 member A9", "gene_name": "CT45A9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DOV1-1", "protein_name": "Interferon-activable protein 211", "gene_name": "Ifi211", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLRGLECINKHYFSLFKSLLARDLNLERDNQEQYTTIQIANMMEEKFPADSGLGKLIEFCEEVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSATQEETSTAQAGTSTAQAGTSTAQAGTSTAQKRKSMREEETGVKKSKAAKEPDQPPCCEEPTAMCQSPILHSSSSASSNILSAKNQKSQPQNQNIPRGAVLHSEPLTVMVLTATDPFEYESPEHEVKNMFHATVATVSQYFHVKVFNIDLKEKFTKNNFITISNYFESKGILEINETSSVLEAAPKQMIEVPNCITRNANASPKICDIQKGTSGTVFYGVFTLHKKKVKTQNTSYEIKDGSGSIEVVGSGQWHNINCKEGDKLHLFCFHLKRERGQPKLVCGDHSFVKVTKAGKKKEASTVQ", "length": 425 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P0DTA3-1", "protein_name": "Speedy protein E11", "gene_name": "SPDYE11", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD3-1", "protein_name": "Speedy protein E14", "gene_name": "SPDYE14", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DUD4-1", "protein_name": "Speedy protein E15", "gene_name": "SPDYE15", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVLGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEIQAYDPEHWVWARDRAHLS", "length": 265 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW11-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 6", "gene_name": "TAF11L6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW12-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 7", "gene_name": "TAF11L7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW13-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 8", "gene_name": "TAF11L8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P0DW14-1", "protein_name": "TATA-box-binding protein-associated factor 11-like protein 10", "gene_name": "TAF11L10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRARVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVRRLKPKGLFPNSNCKRIMF", "length": 198 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P11588-1", "protein_name": "Major urinary protein 1", "gene_name": "Mup1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLENSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAQLCEKHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P11589-1", "protein_name": "Major urinary protein 2", "gene_name": "Mup2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKMLLLLCLGLTLVCVHAEEASSTGRNFNVEKINGEWHTIILASDKREKIEDNGNFRLFLEQIHVLEKSLVLKFHTVRDEECSELSMVADKTEKAGEYSVTYDGFNTFTIPKTDYDNFLMAHLINEKDGETFQLMGLYGREPDLSSDIKERFAKLCEEHGILRENIIDLSNANRCLQARE", "length": 180 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P13255-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "Gnmt", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKFRLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKTG", "length": 293 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P13675-1", "protein_name": "Y-linked testis-specific protein 1", "gene_name": "Ssty1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSLMKKRRRKSSSNTLRNIVSCRISHSWKEGNEPVTQWKAIVLDQLPTNPSLYFVKYDGIDSIYVLELYSDDRILNLKVLPPIVVFPQVRDAHLARALVGRAVQHKFERKDGSEVNWRGVVLAQVPIMKDLFYITYKKDPALYAYQLLDDYKEGNLHMIPDTPPAEERSGDDSDVLIGNWVEYTRKDGSKKFGKVVYQVLANPSVYFIKFHGDIHIYVYTMVPKILEVEKS", "length": 232 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P15515-1", "protein_name": "Histatin-1", "gene_name": "HTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKFFVFALVLALMISMISADSHEKRHHGYRRKFHEKHHSHREFPFYGDYGSNYLYDN", "length": 57 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P16374-1", "protein_name": "Zinc finger protein 60", "gene_name": "Zfp60", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEPEKEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTFRLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFKSFNRISTLFQHRTIHAGMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFSNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHTDGKPYQCKDCWEFFRRRSNFIEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAFHFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGRAFVRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHNLEKP", "length": 707 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P20816-1", "protein_name": "Cytochrome P450 4A2", "gene_name": "Cyp4a2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGFSVFSPTRSLDGVSGFFQGAFLLSLFLVLFKAVQFYLRRQWLLKALEKFPSTPSHWLWGHNLKDREFQQVLTWVEKFPGACLQWLSGSTARVLLYDPDYVKVVLGRSDPKPYQSLAPWIGYGLLLLNGKKWFQHRRMLTPAFHYDILKPYVKIMADSVSIMLDKWEKLDDQDHPLEIFHYVSLMTLDTVMKCAFSHQGSVQLDVNSRSYTKAVEDLNNLIFFRVRSAFYGNSIIYNMSSDGRLSRRACQIAHEHTDGVIKTRKAQLQNEEELQKARKKRHLDFLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKLR", "length": 504 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P21571-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "Atp5pf", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVQRIFRLSSVLRSAVSVHLRRNIGVTAVAFNKELDPVQKLFLDKIREYKAKRLASGGPVDTGPEYQQEVDRELFKLKQMYGKGEMDKFPTFNFEDPKFEVLDKPQS", "length": 108 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P22237-1", "protein_name": "NADH-ubiquinone oxidoreductase subunit 9", "gene_name": "nad9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKDYKNELKVKINLGEHLRLSIPGLVKKIMYKTHYLEIQVEKEKMLTVLKYLKEASKYQCNMLLDIVCVDCLNIEEIKIGRFKLIYVLNSIYNNTRVHLSTYVENNGIIETTSGLFESSVWLEREIWDMFGIYFEKHPDLRRILTDYGFVGYPLKKDFPITGYLEVYYDVNDKKIIYKPIELMQEYRNYNFGAVWGDYERKVYLENIIK", "length": 209 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P22283-1", "protein_name": "Cystatin-related protein 2", "gene_name": "Crp2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MYKTLCGTQLLLAIFVLFLNFSHATAKGTRGPMEIFKKNFMEKNKLNDVYDIFKFLYNKFSHDTYLSNIKNQSFTMNTWGFGEIEVVKTKCRKIDSDFYKCSFQWEFCNIKRTPGVTIYYITLPGSVRCRKLLSKLVNCPFEEQTEQLKREICYFQLYPDYIEQNIRSVRFNCYTK", "length": 176 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P23266-1", "protein_name": "Olfactory receptor 1f45", "gene_name": "Or1f45", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSSTNQSSVTEFLLLGLSRQPQQQQLLFLLFLIMYLATVLGNLLIILAIGTDSRLHTPMYFFLSNLSFVDVCFSSTTVPKVLANHILGSQAISFSGCLTQLYFLAVFGNMDNFLLAVMSYDRFVAICHPLHYTTKMTRQLCVLLVVGSWVVANMNCLLHILLMARLSFCADNMIPHFFCDGTPLLKLSCSDTHLNELMILTEGAVVMVTPFVCILISYIHITCAVLRVSSPRGGWKSFSTCGSHLAVVCLFYGTVIAVYFNPSSSHLAGRDMAAAVMYAVVTPMLNPFIYSLRNSDMKAALRKVLAMRFPSKQ", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24049-1", "protein_name": "Large ribosomal subunit protein uL22", "gene_name": "Rpl17", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVAQKKKISQKKLKKQKLMARE", "length": 184 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P24868-1", "protein_name": "G2/mitotic-specific cyclin-1", "gene_name": "CLB1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSRSLLVENSRTINSNEEKGVNESQYILQKRNVPRTILGNVTNNANILQEISMNRKIGMKNFSKLNNFFPLKDDVSRADDFTSSFNDSRQGVKQEVLNNKENIPEYGYSEQEKQQCSNDDSFHTNSTALSCNRLIYSENKSISTQMEWQKKIMREDSKKKRPISTLVEQDDQKKFKLHELTTEEEVLEEYEWDDLDEEDCDDPLMVSEEVNDIFDYLHHLEIITLPNKANLYKHKNIKQNRDILVNWIIKIHNKFGLLPETLYLAINIMDRFLCEEVVQLNRLQLVGTSCLFIASKYEEIYSPSIKHFAYETDGACSVEDIKEGERFILEKLDFQISFANPMNFLRRISKADDYDIQSRTLAKFLMEISIVDFKFIGILPSLCASAAMFLSRKMLGKGTWDGNLIHYSGGYTKAKLYPVCQLLMDYLVGSTIHDEFLKKYQSRRFLKASIISIEWALKVRKNGYDIMTLHE", "length": 471 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25389-1", "protein_name": "Probable serine/threonine-protein kinase KCC4", "gene_name": "KCC4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTVANTETHSAAKPSSTIGPWKLGETLGFGSTGKVQLAQHERTGHRTAVKVISKSIFNNNGNHSNDDSVLPYNIEREIVIMKLLSHPNVLSLYDVWETNNNLYLILEYAEKGELFNLLVDHGPLPEREAINCFRQIIIGISYCHALGIVHRDLKPENLLLDSFYNIKIADFGMAALQTDADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGRLPFDEENGNVRDLLLKVQKGQFEMPNDTEISRDAQDLIGKILVVDPRQRIKIRDILSHPLLKKYQTIKDSKSIKDLPRENTYLYPLADSNNHTSASIDDSILQNLVVLWHGRHADDIVSKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNRSIQSTPRRRTSKRHSREFSSSRKRSSFLLSSNPTDSSPIPLRSSKRITHINVASANTQATPSGVPNPHKRNSKKRSSKRLSYMPNTKRSSLTSKSLSNFTNLIDDDDWEYIEKDAKRTSSNFATLIDEIFEPEKFELAKREKAELQRKVQEAKRQSVNAQKINEDEFGSEVSDGMKELKKINDKVSSPLINYEFSQQELLQDIDTLLTNRYQLSSYTRPISRLDPGLTPVTETLPNNLKEKTALLQDTEKKIIETIRRSKFLGSLLNVRGGLSPGKSELAPIEESPIVSTTPLIYNDRMEPRRISDVEVPHFTRKSKHFTTANNRRSVLSLYAKDSIKDLNEFLIKEDPDLPPQGSTDNESRSEDPEIAESITDSRNIQYDEDDSKDGDNVNNDNILSDFPQGVGISQEYDMKDKNPNQSPISKSAEPTLVVKLPSLSSFQGKNASGLGLYQREPSKVTLPSLTSNNSSVGENIEDGAEKGTESEKIAASLSDDDLKEDNDKKDNDTVNAPTTVKKPPNSVLLKKFSKGKILELEIHAKIPEKRLYEGLHKLLEGWKQYGLKNLVFNITNMIITGKLVNDSILFLRSTLFEIMVLPNGDGRSLIKFNKKTGSTKTLTKLATEIQIILQKEGVLDK", "length": 1037 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P28312-1", "protein_name": "Alpha-defensin 5", "gene_name": "Defa5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTFVLLSALVLLAFQVQADPIHKTDEETNTEEQPGEEDQAVSISFGGQEGSALHEELSKKLICYCRIRGCKRRERVFGTCRNLFLTFVFCCS", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P28742-1", "protein_name": "Kinesin-like protein KIP1", "gene_name": "KIP1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MARSSLPNRRTAQFEANKRRTIAHAPSPSLSNGMHTLTPPTCNNGAATSDSNIHVYVRCRSRNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFDQVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLGEHAGIIPRVLVDLFKELSSLNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDNNNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQGIFITQDQLDLYESNSILIDEQNLKIHNLREQIKKFKENYLNQLDINNLLQSEKEKLIAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTLNTLQGSLNNYNSKCSEVIKGVTEELTRNVNTHKAKHDSTLKSLLNITTNLLMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEIYQSHQQFLKNLQNDIKSCLDSIGSSILTSINEISQNCTTNLNSMNVLIENQQSGSSKLIKEQDLEIKKLKNDLINERRISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDIWQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRSLPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKIMSLIDEIQSQIETISNENNINLIAINENFNSLCNFILTDYDENIMQISKTQDEVLSEHCEKLQSLKILGMDIFTAHSIEKPLHEHTRPEASVIKALPLLDYPKQFQIYRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKTLPNTEGTGRESQNNLKRRFTTEPILKGEETENNDILQNKKLHQ", "length": 1111 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P29314-1", "protein_name": "Small ribosomal subunit protein uS4", "gene_name": "Rps9", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED", "length": 194 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P33579-1", "protein_name": "Prolactin-8A5", "gene_name": "Prl8a5", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELALSQPSFFGTLLMLVVSNLLLWEKAASIPACMVEDGGCWDPLREAFNSATQRAETLRNLSDQLYVEFFQNQFSSRQFADLSSQLIRKDETVLKAGTYCHSNRAKPKSRGVNIDIEEYLKMSINFCGFMDQPLFHLVIELSAMEGVPETILSKAKDLEENNRQLLDDLRWILTKVFPTAEIKEEFPSWDYLSFLKSSNKNHKFLAIFNLSSCLDYDTQVHYTLSQILNCLITGKDC", "length": 238 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P36006-1", "protein_name": "Myosin-3", "gene_name": "MYO3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MAVIKKGARRKDVKEPKKRSAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQAFAQRLNLFNSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDYTWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRDKYWYNMAARIQRAWRRFLQRRIDAAIKIQRTIREKKGGNKYVKLRDYGTKLLAGKKERRSMSLLGYRAFMGDYLSCNESKTKGSYIRRQVGIKDKVVFSIKGECLHSKFGRSAQRLKKVFILTKKTFYIIGQTREQNAMKYTQDYKIDVGKIKQVSLTNLQDDWMGVILVNSTQSDPLINTPFKTELMTRLKKLNEKIMIKVGPTIEYHKQPNKLHTVRSKISDSAPKYGDIYKSSTIYVRRGHPANSKSNKKPKNPGGLSGKPIKSKKSKHKSTHKHTHSHRSHRDAAKKQPLPSQKPVNPLSLAATAAQAAYNPKPDKTVPIKSSAIPAAKVSSKHSSKPSSKEKVAVKKASSSHKSSSAKQNQVSMPPSKGVEKNKEPLKETTATATANIPIPPPPPPMGQPKDPKFEAAYDFPGSGSSSELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKDTRNTVPVAATGAVNDVTNQKSSQIDNTISSAQEGVQFGSATVGPTSDNQSNPVGTFSDGLASALAARANKMRAESADDDDNDDGDDDDDW", "length": 1272 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36046-1", "protein_name": "Mitochondrial intermembrane space import and assembly protein 40", "gene_name": "MIA40", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MLRNLVVRNACRNRPSIQVARGLCRHQTRRLMASSPQFGRNSNQEKTAGFIMGILSMAGALYFIAPNRKPLFASRKVESDKTAEEELSSGGEQSPENEDDNNSKSDENGDDNDSKNDETEAGPQLGGDKIGASKVAEDGELVVLAEEDNKSSEDKDTDESKVSTKDDEQSNEDNATANNQKDENISSENSEENTSDKTLDNNAGSSEKKDPEHSDDEKSQQGQSDDKTTTEDNNGEEESSKKTVSDSENSAKQSESSDEEKEELRKQEEKQMGPTEEEVQHEGAYNPDTGEINWDCPCLGGMAHGPCGEEFKSAFSCFVYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEPQDKVKVNTIESAPNVSSAKENAAKKAEQSDVKKEPLNEESKP", "length": 403 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P37106-1", "protein_name": "Signal recognition particle subunit SRP54 1", "gene_name": "SRP-54A", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRIPLNQLFSMLPGISAEMMPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLEEYKRIAKTMKGIKIPKNGDMSKVIPPQMLKQMGGMSGLQSLMKQMGSAKDMMGMFGGGGK", "length": 479 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38150-1", "protein_name": "Inactive deaminase YBR284W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MVQNNESVFFVECDSYKESPSTSPIRLDDLDGNDAVSDQGLAFDGDVGITSQARVRNPRAQIFEDSNTDVVLHLDDLDMVPLNTKFDMQMEMGSPMAMPAETPPPVEPLKTKDLAYSSLAHLPSYFFEQTHFRIDRKCLLEMSKLRRNYLTISKQDALSCPQLHSRVAGGYLKPVKEKLFGIRHFLDLEESNTVNLLQDGNYMTELFNSQINIPTFKEFREDFEWCLKIIRDRSLSRFSEKRLQYLVNKFPVFQHLHSKEEMRQSKKVPHKDFYNCRKIDLNLLLSGCFSQWQLTEFIWTKLRKEPDRVIHQAFNGSHITLSQLFKVNFEETGQFFNGLKIIDDSFLEWYKVIYLAKYHLVNDEMEIHTGSHGKQLRYYLIAKTFLEFDNYINGEYLAELLKTFLIKPQEESKYQLCQLSVDFQFYLHYDNSDVDNWWMVFANWLNHYNIFSNNIRWNIRISRIYPELYHTGKVKNFQEYLNLIFKPLFNAENYLHKSLGPILLKFLSQVSSIDLCIQDTDNYIWKNFTAVSCLPKDWTSGGDNPTISQYMYYVYVNLTKLNHIRQALHQNTFTLRSSCSPTSMNRTSQFSNTLNFTEHTEAILNNFLLACGGFLNAENLWNAPPSLVYLFYLSQIPMVVAPLNSIVDSKPTMLQEQAPTGLVLEPSKPYKKNPFMKFFEMGFKISLSSESILYNNSYTKEPIIEEYSVAASIYRLHSADLCELLRNSVITSGFSSTLKNKWLGVSLASHDYFVENTGFVDKWYDCKPNTSLEHNVPIIRRQYRSSTLAGEWRLIIA", "length": 797 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40002-1", "protein_name": "Transcriptional regulator MIT1", "gene_name": "MIT1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MDIEPTFKGYIEDEDDALLILQATLDGKLKHIPRRPYEIERPYLIVSGSIFVFIEEISGIKRWTDGVSWSPSRISGKFLIYKELDKENAGSNANATSSGSTDSAVITDGTSGARNNPSSSKIKLPPLKNHQFDLPPTMGHSSFESEQDTSISPSNRSNLPLKYTGLVKKTISVKLKRPPFNSIENLHIVSYYSVKDIKQNCLVTPKASPFLKDVRPSQELIVAMGNTTLGNVKNNSTTTGNGPNNINNKSNSSTPLNTVISTNNNSANINAAGSNQFTSANKNYYYKNDESSGYPITQFAPALPSTTLMYTANPPYITQSPDNTNATGMNTHVNNNNNNSNNSSNSNNSNNNNNNNNNNNNNNNNNINNINNVNTNAGNGNNPNRFHNASFAYNTTGDFINPQQQGQISYPFYYTTIPINNPNYYTTQPPNPVTNASTNENQGYSTSSTQHPYYGHPTESQSASAAAGATGTPGTAENVLPVSSMQPLLHQANNNSASSATSTAPYPVYSMNVNVPYYNSSASAYKRAQENTTSNTNAEPSGATSTNSGTMLSNPAYANSQYTPSQVYYQGFPQYAMASAQNPSMYQHQHQHPLPTVYPIATPQQNIMSSGHTLSTIGSDPQHHHYQQEPNDHKNFAMGHANNNILNITNNDTMNNLNTNTSTTTQ", "length": 666 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P42222-1", "protein_name": "Enolase-related protein 3", "gene_name": "ERR3", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MSITKVHARTVYDSRGNPTVEVEITTENGLFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMISLDGTSNKSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLAMQEFKIAPVGAQSFAEAMRMGSEVYHHLKILAKEQYGPSAGNVGDEGGVAPDIDTAEDALDMIVKAINICGYEGRVKVGIDSAPSVFYKDGKYDLNFKEPNSDPSHWLSPAQLAEYYHSLLKKYPIISLEDPYAEDDWSSWSAFLKTVNVQIIADDLTCTNKTRIARAIEEKCANTLLLKLNQIGTLTESIEAANQAFDAGWGVMISHRSGETEDPFIADLVVGLRCGQIKSGALSRSERLAKYNELLRIEEELGDDCIYAGHRFHDGNKL", "length": 437 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P43356-1", "protein_name": "Melanoma-associated antigen 2", "gene_name": "MAGEA2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQQTASSSSTLVEVTLGEVPAADSPSPPHSPQGASSFSTTINYTLWRQSDEGSSNQEEEGPRMFPDLESEFQAAISRKMVELVHFLLLKYRAREPVTKAEMLESVLRNCQDFFPVIFSKASEYLQLVFGIEVVEVVPISHLYILVTCLGLSYDGLLGDNQVMPKTGLLIIVLAIIAIEGDCAPEEKIWEELSMLEVFEGREDSVFAHPRKLLMQDLVQENYLEYRQVPGSDPACYEFLWGPRALIETSYVKVLHHTLKIGGEPHISYPPLHERALREGEE", "length": 314 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43357-1", "protein_name": "Melanoma-associated antigen 3", "gene_name": "MAGEA3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASSLPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAELVHFLLLKYRAREPVTKAEMLGSVVGNWQYFFPVIFSKASSSLQLVFGIELMEVDPIGHLYIFATCLGLSYDGLLGDNQIMPKAGLLIIVLAIIAREGDCAPEEKIWEELSVLEVFEGREDSILGDPKKLLTQHFVQENYLEYRQVPGSDPACYEFLWGPRALVETSYVKVLHHMVKISGGPHISYPPLHEWVLREGEE", "length": 314 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P43537-1", "protein_name": "Uncharacterized membrane protein YFL067W", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MESIILSIAIFIGVLLGTSVGAGSGSSISPDVDAGSGSRTSPDVDAGSGSRISAGVGTFSGSSTSPDVDAGSGSSTSPDVGAGSGSSISAGVGSRIGTGIGSRIGTGIGTGIGSRISTSIGSRISPDVGTSSGNRISTGVSTGISTTMNARVAVLITAAILSAPVTAIALLEARR", "length": 175 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P46162-1", "protein_name": "Beta-defensin 4", "gene_name": "DEFB4", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLAVLFLVLSAGSGFTQRVRNPQSCRWNMGVCIPFLCRVGMRQIGTCFGPRVPCCRR", "length": 63 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P46169-1", "protein_name": "Beta-defensin 11", "gene_name": "DEFB11", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRLHHLLLALLFLVLSAGSGISGPLSCRRNGGVCIPIRCPGPMRQIGTCFGRPVKCCRSW", "length": 60 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "P47102-1", "protein_name": "ARF guanine-nucleotide exchange factor 1", "gene_name": "GEA1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MHDVPMETVLAVNPATMIVKECINLCSAMNKQSRDKSQTSVAALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDSLNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDIQIAVRETVVALTHCRFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTIIYDVLQTTLSLACNTQRSEVLRKTAEVTIAGITVKLFTKLKLLDPPTKTEKYINDESYTDNNLKDDIIGTTTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEKAENVEPNYGITVIKDYLGLLLSLVMPENRMKHTTSAMKLSLQLINAAIEISGDKFPLYPRLFSLISDPIFKSVLFIIQSSTQYSLLQATLQLFTSLVVILGDYLPMQIELTLRRIFEILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIKELTKFSLPAAAVNTSNNIPPICLEGVLSLIENIYNDLQRFDRAEFVKNQKEIDILKQRDRKTEFILCVETFNEKAKKGIQMLIEKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLLCDPKKTSLLKEFIDLFDFKGLRVDEAIRILLTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGKDFPRWYLHKIYTSIKVKEIVMPEEHHGNERWFEDAWNNLISSTSVMTEMQRDFTNPISKLAQIDILQYEKAIFSNVRDIILKTLFKIFTVASSDQISLRILDAISKCTFINYYFSFDQSYNDTVLHLGEMTTLAQSSAKAVELDVDSIPLVEIFVEDTGSKISVSNQSIRLGQNFKAQLCTVLYFQIIKEISDPSIVSTRLWNQIVQLILKLFENLLMEPNLPFFTNFHSLLKLPELPLPDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECVKASHPLSSVFENNQLVSPKMIETLLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYGQEFGALIADHMINISNLDGLSKEAIARLASYKMFLVSRFDNPRDILSDLIEHDFLVKNEIFNTKYYESEWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTFLEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKWEQNYENSVEDGCEAPESNPYRSIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQALQALENILLSRASQLRTEKVAVDNLLETGLLPIFELDEIQDVKMKRITSILSVLSKIFLGQLVEGVTSNETFLRVLNVFNKYVDDPTVERQLQELIISKREIEKE", "length": 1408 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53563-1", "protein_name": "Bcl-2-like protein 1", "gene_name": "Bcl2l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEETEPERETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDHLEPWIQENGGWDTFVDLYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK", "length": 233 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P56840-1", "protein_name": "Protein TCL1B1", "gene_name": "Tcl1b1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAAFDPLGPLPVYLVSVRLGIYEDEHHRVWIVANVETSHSSHGNRRRTHVTVHLWKLIPQQVIPFNPLNYDFLPTTWKLESRNIYWATDGTHWRLLDHSQLGDTEQLILMLVLG", "length": 116 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56841-1", "protein_name": "Protein TCL1B2", "gene_name": "Tcl1b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAAAGFYPPRLLPQVLISTGPGFYEDEHHRLWMVAKLETCSHSPYCNKIETCVTVHLWQMTRYPQEPAPYNPMNYNFLPMTWRLASMNTYRGTDAMHWRLLNHSQVGDTVQLILMLE", "length": 117 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56842-1", "protein_name": "Protein TCL1B3", "gene_name": "Tcl1b3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVHFPWMPFPPRFLVCTRDDIYEDENGRQWVVAKVETSRSPYGSRIETCITVHLQHMTTIPQEPTPQQPINNNSLPTMWRLESMNTYTGTDGTYWRLLDHSQMGDTLQLILDIVICEVD", "length": 122 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P56844-1", "protein_name": "Protein TCL1B4", "gene_name": "Tcl1b4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADSVRFPCMPFPPCFLVCTRDDIYEDEHGRQWVAAKVETSSHSPYCSKIETCVTVHLWQMTTLFQEPSPDSLKTFNFLPRTWRLESRNTYRGADAMHWRLVNHSQFYGTEELVLMLDSR", "length": 120 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P59528-1", "protein_name": "Taste receptor type 2 member 123", "gene_name": "Tas2r123", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MFSQKINYSHLFTFSITLYVEIVTGILGHGFIALVNIMDWVKRRRISSVDQILTALALTRFIYVLSMLICILLFMLCPHLPRRSEMLSAMGIFWVVNSHFSIWLTTCLGVFYFLKIANFSNSFFLYLKWRVKKVILIIILASLIFLTLHILSLGIYDQFSIAAYVGNMSYSLTDLTQFSSTFLFSNSSNVFLITNSSHVFLPINSLFMLIPFTVSLVAFLMLIFSLWKHHKKMQVNAKQPRDVSTMAHIKALQTVFSFLLLYAIYLLFLIIGILNLGLMEKIVILIFDHISGAVFPISHSFVLILGNSKLRQASLSVLPCLRCQSKDMDTMGL", "length": 333 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "P61314-1", "protein_name": "Large ribosomal subunit protein eL15", "gene_name": "Rpl15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR", "length": 204 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62246-1", "protein_name": "Small ribosomal subunit protein uS8", "gene_name": "Rps15a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF", "length": 130 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62425-1", "protein_name": "Large ribosomal subunit protein eL8", "gene_name": "Rpl7a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPKGKKAKGKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKSVARIAKLEKAKAKELATKLG", "length": 266 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62802-1", "protein_name": "Histone H4", "gene_name": "", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG", "length": 103 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P62963-1", "protein_name": "Profilin-1", "gene_name": "Pfn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAGWNAYIDSLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVSITPAEVGVLVGKDRSSFFVNGLTLGGQKCSVIRDSLLQDGEFTMDLRTKSTGGAPTFNVTVTMTAKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY", "length": 140 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P62982-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "Rps27a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK", "length": 156 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P70709-1", "protein_name": "Eosinophil cationic protein", "gene_name": "Rnase3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGLKLLESRLCLLLSLGLVLMLASCQPPTPSQWFEIQHIYNRAYPRCNDAMRHRNRFTGHCKDINTFLHTSFASVVGVCGNRNIPCGNRTYRNCHNSRYRVSITFCNLTTPARIYTQCRYQTTRSRKFYTVGCDPRTPRDSPMYPVVPVHLDRIF", "length": 155 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P81278-1", "protein_name": "Prolactin-releasing peptide", "gene_name": "Prlh", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALKTWLLCLLLLSLVLPGASSRAHQHSMETRTPDINPAWYTGRGIRPVGRFGRRRATPRDVTGLGQLSCLPLDGRTKFSQRG", "length": 83 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83883-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "Rpl36a", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "P83884-1", "protein_name": "Large ribosomal subunit protein eL42", "gene_name": "RPL36A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF", "length": 106 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "P97876-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like 3", "gene_name": "Batf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSQGPPAGGVLQSSVAAPGNQPQSPKDDDRKVRRREKNRVAAQRSRKKQTQKSDKLHEEHESLEQENSVLRREIAKLKEELRHLTEALKEHEKMCPLLLCPMNFVQLRPDPVASWSAHDAPDHPSFIWLGTLV", "length": 133 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q00729-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2bc1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPEVSAKGTTISKKGFKKAVTKTQKKEGRKRKRCRKESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVTDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK", "length": 127 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q01534-1", "protein_name": "Testis-specific Y-encoded protein 1", "gene_name": "TSPY1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRPEGSLTYRVPERLRQGFCGVGRAAQALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVERREEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHPQMSALITDEDEDMLSYMVSLEVGEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNSSLNFFNWFSDHNFAGSNKIAEILCKDLWRNPLQYYKRMKPPEEGTETSGDSQLLS", "length": 308 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q03764-1", "protein_name": "Ethanolamine kinase", "gene_name": "EKI1", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MYTNYSLTSSDAMPRTYLVGTASPEMSKKKRQSANCDKPTRRVIHIIDTNEHSEVDLKNELPITCTNEDGEMTSSSWTSQTANDFLKLAYVNAKLDPSLPSQYFKQDIINVLQSLEIPGWSVPGSKESSLNKNLLTLTQIKGALTNVIYKIHYPNLPPLLMRIFGDSIDSVIDREYELKVIARLSFYDLGPKLEGFFENGRFEKYIEGSRTSTQADFIDRDTSIKIAKKLKELHCTVPLTHKEITDQPSCWTTFDQWIKLIDSHKEWVSNNVNISENLRCSSWNFFLKSFKNYKRWLYNDSAFTSKLLREDDKDSMINSGLKMVFCHNDLQHGNLLFKSKGKDDISVGDLTIIDFEYAGPNPVVFDLSNHLNEWMQDYNDVQSFKSHIDKYPKEEDILVFAQSYINHMNENHVKIASQEVRILYNLIIEWRPCTQLFWCLWALLQSGRLPQRPLIEGEKLMSEKAGLGDETHLMEHKNKENGKYDCSEDDSFNYLGFCKEKMSVFWGDLITLGVIDKDCPDIGKTDYLDTKLIF", "length": 534 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04902-1", "protein_name": "Probable glutathione-independent glyoxalase SNO4", "gene_name": "SNO4", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKIFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNRAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYS", "length": 237 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q0D2J5-1", "protein_name": "Zinc finger protein 763", "gene_name": "ZNF763", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDPVACEDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEYEYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEVGIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYACKECGKTFISHSGIRRRMVMHSGDGPYKCKFCGKAVHCLRLYLIHERTHTGEKPYECKQCVKSFSYSATHRIHERTHTGEKPYECQQCGKAFHSSSSFQAHKRTHTGGKPYECKQCGKSFSWCHSFQIHERTHTGEKPCECSKCNKAFRSYRSYLRHKRSHTGEKPYQCKECRKAFTYPSSLRRHERTHSAKKPYECKQCGKALSYKFSNTPKNALWRKTL", "length": 394 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q0WX57-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 24", "gene_name": "USP17L30", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEDDSLYLRGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSCETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALHNPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRATQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVRKVEGTLPPDVLVIHQSKYKCGMKNHHPEQQSSLLNLSSSTPTHQESMNTGTLASLRGRARRSKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q1LYG5-1", "protein_name": "Elongation factor 2a.1", "gene_name": "eef2a.1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MENFNVDQIRATMDKKSNIRNMSVIGAFDHGKSTLTDWLVSEAGIVSSARAGETRFMDTRRDEQERCITIKSTAISIFYELAEKDLAFIKECKDGSGFLLNLIDSPGHVDFSSEVTAALRITDGALLVVDCVSGVCLQTETVLRQAIGERIKPVLMINKMDRALLELQLVPEELYQIFQRIVEKVNVTISTYAEDEKGPMGNVMIDPVIGNLAFGSGLHGWAFTLKQFAELYVKKFAGKAQLGPEEYIKKVEDMIKRLWGDSYFDSTTGKFSESATSPDGKKLPRTFVHLVLDPIFKVFDAIMNFKKEETVKLIEKMGIKLDVEDKEKEGKILLKAVMRCWLPAGEALLQMITIHLPSPVTAQIYRCELLYEGPGDDEAAMGIKNCDPKAPLMMYISKMIPTSDKGCFYAFGRVFSGCVSTGLNVRIMGPNFTPGKKDDLYLKPIQRTVLMMGRYVEPIEDVPCGNIVGLLGVDQFLVKTGTITTFTKAYNMRVMKFSVSPVVRVSVEVMDPADLPKLVEGLKHLAKSDPMLQCIIEDTGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPFASYRETVSDGSKQLCLAKTPNKHSRLFMKACPLADGLAEDIDKGRVTASQEMNARAQYLAENYKWEVTEARKIWCFGPEGTGPNILVDLTKRVQYLNEIKDSVIAGFQWATREGVLCAENMRGIRFDIHDATLTSTAIHRGPGQIIVATRRVLYGCQLTAEPRLSEPIYLVEMQCPESVIGNVYGELVRRRGVVFSESQVMGTPVYLLKAYLPVSESFGFTADLCANTSGQAFSQCVFDHWQILPGDPMDPTSKVAHIMADIRKSKGLDEAIPALHCYLD", "length": 854 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q1PEY5-1", "protein_name": "Probable 3-hydroxyisobutyryl-CoA hydrolase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDLKFPPRNNLPALAIAAKL", "length": 378 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1ZXA5-1", "protein_name": "ADP-ribosylation factor-like protein DDB_G0292332", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDFIISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETILMSQNNNDDLIKCINWIFSN", "length": 186 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q1ZXJ4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLFTLLKRHFGNELNNIVWLVLLYLIQGIPIGLSFGTIPFLLHKHATYTQIGIFTISTYPYSLKLLWSPIVDSYFVQSFGRRKSWIVPIQILAGIVFITISFFIETLLEHAETKIIYITIVFFLLIFLMATQDIAVDAWALTILSKPYLHYASTCQTIGLNTGYFLSYTIFLTLSSPKFANKFLRSVPSEEGIITLPGYLQFWGILFIILSIYLAFFKDEESTTITTTTTRHDNYNNNNNDDKNKQVKSKIENESIESKSMRSSPSSLSPSLLSSPVKKQNKKNKQHISIDKKDITIIKENNENNEIIDNNNSNNNYDNGKKSIVQETYGMDISESDLTPKQVYYLLWKIITLPHIKILSILFIISKIVFQPNESALNLKLLEKGLRKEDIASFSLIQFPSIIIFSIISSKWVKNKPLTIWSNAYLVGVFFILVNMCSVFYFPNLNGGEISWSHFFLLLMISLFSSFSYNLMSVSQGSFFLKISDKSIGGTYVTLLNTIANFAGTYPKLFILMLIDKLTTSECIVNISNDNSSSSSSSSSLISTSSNNLTTTTTIIQEQQQQVIIHDNISKELCAEQNGKYRIERDGYYLVATGAIIYGVFIYFVLKRYLTPIEKLKL", "length": 618 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q23888-1", "protein_name": "Large ribosomal subunit protein uL2m", "gene_name": "mrpl2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVLNWRGVKSRLYSGKRRIDGRNKGLIAIRSRGGALKRKYRYIEHYKQKWMDKWLFVMRIEYDPNRSAHIALCSILKEGIYFYVISIAKLEVGSLIITSALKLGTLQVGNTTKIKNIPEGLLINNIELIENSGSKISRAAGTSSLIIKKYNKKYSLVKLSSKECRLISNECYATIGTVSNIERKLKQNKKASYSRKRGIRPIVRGLAMNPVDHPHGGRTKGGVHWKSFSGKLAYNVSSRKKTKMTSRYIIIGHRKQKIMDKQIKNG", "length": 266 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q24113-1", "protein_name": "Protein no-on-transient A", "gene_name": "nonA-l", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKARLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGFQVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQGDQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGAGGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHELPPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEKNFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVSNELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNEKCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFACLNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQETELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHEEDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNSNNSTMAGPGGPDNSDGNQHGHIDSWGHRRF", "length": 630 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q2PRK7-1", "protein_name": "Odorant receptor 106-10", "gene_name": "or80a10", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MANETFVKNVDSFIITGFDHLQNQKLLGSLILISYMFILLGNGINLCIISTDRHLHKPMYILICNLAVVDIMYSSTCSTTMISVLLAEIKTVSYYSCISRTYFFNLGDLTECMALTLMAIDRLIAINLPLRYHSFVTNSRILWLIFLTWIFSFAVIGFLTYVADTLPYCQPIIKYVFCSYSSLVRAACVDPEPYFAISTVYSMVTLCGLFPFILCTYAVLAYSVTKLANSSRKQMINTCLSHIIVLFSFYLPKIVYILLTRIGLVLTLTERNAVLIVSCFVSLLVNPTVYCIRTKGIRKRITDIFLYTQKITK", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q2YDJ5-1", "protein_name": "Uncharacterized protein CXorf66 homolog", "gene_name": "", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MNLFIYVLLLSIWTSSCLDRNESNGSATAVTTHAEFKQTKLQELRRRLLIIVIGTLITGYMVSCTCLLHYSCDSEEAHTAAKDKKEDITIKASRSSKISFTDSKSPTAGLGDPERQSVVSRIDKSSGPSSPRKVPSSAEKLVRPSSQKKPSKPSAPKKVLGSPPQEKLHRTRSPKKAHRQAHAHKPVSQVSPSYPEKAIKSTWPPSLQCRAKPTKTPLPYPKNQSFPEQSSVDKLTKRQRYLKLKCPASAGRAEILSRPHPVKFCRCYKEKCLVCRAVSEPFITHVSDANKKHVPVPLFSRELKHFYKSYKKKQPKYNTLYGNMSDSDITTYNSDGESDREVIIMCNIKCKEDIYKNSRNN", "length": 361 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q3L180-1", "protein_name": "Alpha-defensin 26", "gene_name": "Defa26", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALFLLAFQVQADPIQNTDEETNTEVQPQEEDQAVSVSFGNPEGSDLQEESLRDLGCYCRKRGCTRRERINGTCRKGHLMYTLCCL", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3TR54-1", "protein_name": "Gasdermin-C4", "gene_name": "Gsdmc4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGYSFDRASKDVVKKLQGRDLRPVECLSDATKFRLFHILQETPRSGWETEDIPVGFTLLDLLEPNFPVPEPEVSAPKPFIHVQSTDLEANLNVADIARGGVGYVGYGGYNIEVQSTSIPNPKLEILQNRKLLDKLPTFMKFCRMERKNLYVVTEAYEVSKDTMLTGLSSVNLLVKGFFKQLFKVRGKAGRSEKYSIPIPKGSVLAYKKQQLVIENNTCVILPSATKKKMTFPDRPLKLYDLPVTLRYQEEVIETGSWIDDIDPIGTIEEPANLNFMCLQHEVSEQTQLLAELSKDVQEVVFSSFLHMLSDRDVLYDLMKMLELNQLGHMDGPGGKILDELRKDSSTPHDVLKDLNLYLLQALLVLSDTQLCLLAQSVKMGLLPHQVELVKSILQTNFKYSSNTPFTLQPQLLAPLQGEGLAITYELLEECGLKMELNNPRSTWDLEAKMPLSALYGSLSFLQQLQKANSSSKPSLSPGYI", "length": 480 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3U0I6-1", "protein_name": "Endoregulin", "gene_name": "Erln", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGQMVPPRSIQNEDFWKNPWDVGGLTVIGLFTSTFLLFVLFAVVFGYVEKAVFEEE", "length": 56 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3URS2-1", "protein_name": "Zinc finger and SCAN domain containing protein 4F", "gene_name": "Zscan4f", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIMQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSEKDPREVPGLQSRQEQLISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q3ZCQ0-1", "protein_name": "Required for drug-induced death protein 1", "gene_name": "", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTVGARLRSKASSLVGRGPLGRLRRAGDEETDAIVEHLEGEDEDPESQDCEREEDGRRAGTPSARRVHLAALPERYDSLEEPAPGDKPKKRYRRKLKKYGKNVGKAISKGCRYIVIGLQGFAAAYSAPFGVATSVVSFVR", "length": 140 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI3-1", "protein_name": "Defensin alpha 3", "gene_name": "Defa3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGTLTLLTTLLLLALHTQAESPQGCTEDQKLLIMEDQDISISFTGDKGTALQDADVKSGVICNCRPRGCSFKERVYGECGYNGHILRLCCQPLNTMNKKSPSVI", "length": 104 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4JEI6-1", "protein_name": "Defensin alpha 8", "gene_name": "Defa8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKTLVLLSALVLLAFQVQADHIQEAEEETKTEEQPADEDQDMSVSFEGPEASALQNLEIGWPLKQCHCRKFCRPYEKAEGSCRPGLFIKRKICCIQQWTPGRT", "length": 103 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q4KL71-1", "protein_name": "Small proline-rich protein 2A3", "gene_name": "Sprr2a3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q504N7-1", "protein_name": "Pyrin and HIN domain-containing protein 1-like", "gene_name": "Ifi214", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVNEYKRIVLLTGLMGINDHDFRMVKSLLSKELKLNKMQDEYDRVKIADLMEDKFPKDAGVVQLIKLYKQIPGLGDIANKLKNEKAKAKRKGKGKRKTAAKRQRQEEPSTSQPMSTTNEDAEPESGRSTPDTQVAQLSLPTASRRNQAIQISPTIASSSGQTSSRSSETLQSIIQSPETPTRSSSRILDPPVSLGTAYSSAQALGVLLATPAKRQRLKNVPKEPSEENGYQQGSKKVMVLKVTEPFAYDMKGEKMFHATVATETEFFRVKVFDIVLKEKFIPNKVLTISNYVGCNGFINIYSASSVSEVNDGEPMNIPLSLRKSANRTPKINYLCSKRRGIFVNGVFTVCKKEERGYYICYEIGDDTGMMEVEVYGRLTNIACNPGDKLRLML", "length": 393 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54B59-1", "protein_name": "O-methyltransferase 12", "gene_name": "omt12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDWDKTMDLLFGFVTGHIHSRMFETILKFSICDLLEDGPKHYSEISKIIGFKNESYCYRLMRYFVPYKLFNESVVQVGLFSKTPSSTQFSKNGTLKNLGRFHCQDHHYRIFESLPKTLEMGKNQGPSSIGLSSFWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFKTVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLKPNGKLFINDLVLDPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGFKIDSVDTSISPQLMIVSKINSSNINLNDCTNFNSEIVEEKLKNSLPQFVNC", "length": 369 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B60-1", "protein_name": "Probable inactive O-methyltransferase 11", "gene_name": "omt11", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MECSESLELVDKFACGHILSRMFNVVMKHSICDLLEDGPKHYSEISKIIGFKDDSYCYRLMRYFVPRKLFKESVVQVGVFSKTPFSTEFSNNGTLKKLAKFHCNSFHYKLSQVLPETLEIGENQGPSSIGLSDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIILDSSKYLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGFKIDKYESGSPNYLIISKE", "length": 331 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54B86-1", "protein_name": "Hly-III related family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPRLDHKKNKEEKDNEPLMMVNNYNIGIQTDNNQEDIQNDYHHFNDLSINIKNNKNNNNNNNKCNSLHHKHYHNRFIINGGNNNNDNNNNNNGDDCCANIELFVDLMLSENEYILSGFRLHTKNSYMECTKSIFKLHNDTLNIWSHLLGALFYLVLFFTSIIKIIKLNNNDGGGGGGIGNNFILNSDEIKLLETIDLPSNFNYLFFQLSCFICFLSSTIYHTYRSHSIVVFKTTLMLDVASIALLILSSVCLIIDSELSCWPYFKRIYLFSFLILILISFLSLPKIMREKRYGLRTFLFAILALQGLVGHLFKIYLQGYFDKDPNQFYNLIGAYTLFGLALSIRRFKVPESFKPGHFDVWVNITFNIVYNII", "length": 372 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54BG8-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGKIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54C66-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKTKKYKNPFPTNSYKEPENDSDNEYILHNEEDNEDYGSNNNNINNDGFSYEDNIENSDTEDEREDYGYINYNTNNEEDDEPIDLSTPIKKKKANNKSFKPPYKNTTTTTTTTTTTPPTPPPSKSNNNNNNNNNNNNNNNNNKNKENINKESEYELNKFLDLYNDFKSESDNKVKPTATTTTTTTTTTSTSTSKLNKDKKGVIVIESDEEKEDNTIKINKRNGKRKEGEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGNEDNLKSENFNKFKKLKSFSNQPTPLPPMLSNPFLNNSGNSHNNNNNRILFNSQFTNASNLNNNINNNINNNINNNINNNINNNINNRNNNTNNYTNNNNNNNNNNNNTNNNNSNNNINNNNYNNNNNNSFSFLPIRSNTLPTIVTRRTGIQSSSSDNGNSNSNHSSSMNKRNTSKSNNKKSTTTTKTVLPPPLSSRTQEEEDYALALSISEGLNGGSGGGSGSGSGSSDNSTKTKRSKSENDLPNEETRHQVEMDRRFAEQLHREQHENINQIQQLQRRLHLNQQRTNNINRNHHGDEDEEDIEMLNLRAYQQIQQQFNQHFNQQLNQLANHPLANLFSHASRGRGRGARRIPHHPHHHHHPHQAQYLTGLSQEQLNLMTRDFSSNDYELLLQLDENINNKGATTSDIENLPVHTLNKPTATTTSTTTTTNSSTSDDNKKNEPTTDVTCCICLCEMEPGDAVRTLPCKHFFHVSCIDQWLKVNKVCPIDKKAIDEK", "length": 766 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54CY8-1", "protein_name": "Obg-like ATPase homolog", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKGIKLFNNFTNTKQILFFRSFSTAAKGDRLKASHYVKTRGSCKSISIVGLPNIGKSTFFNALTSSNAAMAANFPFCTIDPNIGKVFVPDERLDYISDLLKTKSKIGVQLEFVDVAGLIKGAADGEGLGNKFLGNIRQTSLICHLVRCFEDKGITHVSDEIDPIRDIETIETELILADLQSLEKMLTEGKKKQSNPELQMKFDLVKRISEYLHKGLPARDVEITDMEWPVFHSLHLLTSKPTIYTCNVAEGDAATGNKYTDLVKEYSKSKGLEIEPVVISAKIESELANMEGNDETKKEFLQLYGLENNGLSKVINGAYKLLGLQSYYTASSNECHAWTFKAGWTAPKAAGVIHSDFEKGFIKCDTISYNDFIECKGDEKIAKEKGKQRSEGKAYIVNDGDILFFKFN", "length": 409 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54D44-1", "protein_name": "Probable polyketide synthase 42", "gene_name": "pks42", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIESQREFNCIGGDNQNGVAVIGVGFKIPLDLENCLSSPSELYSALFNEFDSVTKNTSSRWSDNYFKNGDIVSLSAGLLPLREIKSFDPTFFGINPSDADLIDPQQRLLLKCVWNALEDGGIDPISIRSSDTSVYIGCSTIDYFLLNRNPVDPHNHGIQTASYSIPNRISYCFDFRGESLFVDTACSSSLNAVHLGYNSIINLKSKLSIVGGSNLILDPQNSIFFSKQQVNGPSGKCNSFSEEADGFVRSETVGVVVLKNLKDAIKDGDRIYCVIQGSNSNVDGNYEKLNYISPSKLSQAENITKALKSTNGAVNASDIDYFECHGTGTPTGDPIELEGISIALNRTQQSTTLSNPLLIGSIKSNIGHGEASSGIASLIKCCVMFKYRQFLPNINFKTPNPLIKFKEWNLKVVTEPVPFNNNKQTIMAINNFGVSGSNCCIILSEYKSNNNNNNDFKATTHLKSKKFIIPFSSNSSTSLDNYKSLLSNETNNFQDFVIKQINNKSTSLIQRSVIIASNWSEFNESSNEIQSNIKKSIISNITIKKKNAVTVFVFCGQGSQYNKMALSLYENEHIFKSTMDKLDKELSKHYGYSILEKLRSITDEDLVTIHQPILAIPVNVMVQVSLYELYKHWGIKSDIMVGHSFGEIACSYCSGMVDFKTLCYLTYHRSVAQNKTIGSGKMLSINIGAKEYLDSYSTKYPSVEIACYNSETSIVIAGNEELLNEISKDLKSKDIFTAMLPSLSAFHTTHQSVIKDDICSLNFKSTLSKITVFSTVTSNQFGINNNNNNNNNQLNSNYLFQNVIQPVKFSETISNIYKYIESNDMGNEITFIEIAPHPTLQYYLNQMKSQQSEYFNNGEKISIYSACNKKKNDYNEFLKTISTLFVNGYNNINFKSQIINNNNNDNNNNFNLPLYQWDDNEYYKIHPTWKKANKNGPSINHLGNLNDSSIKSFKTYINTRKPQFQWLKGHSLKGKVVFPGMGYISNLLSVYNMNQDITINEIQFKSAFILVDGVNNCLETSIVPLTKNEFNIKFHFKDLKTNKWVLCANANYSLFKHNDNNDKLDIEKLKSNCNYTIISKDELYNNIRAKSGLIYKGLFQGVKEAFIGNRCSLTVLSLNEIENQQEFKHLLENRNFNSLFNTAILDSCLHGSLHSKEQSQIYFDKCEGFKYYSNNINLATSKRNEYKEINVYIETNPVINSTVIVSLKIMLPDGTLLIEIQKVVCKSSIPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKHLHCMKEFASIESDNREMVYMSIYHLIFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYHTNHSNYKKNQIKDFIKECEDFNGYNQIIFKTIKIYAKSLFPLPDDDPFTDTIQSLFEDDQLENVYIHLKHLYPVNNLLSEIVFQSIKPIINQTSTFRILEIGAGYGTISQLIFDKLEQLLADNFTSSRIDIEYTFTDISNTFLPRAKERYSKYKRFNIIYKLLDLELPLTEGIQDFRPLYYDIVVMSNVLHVVKDINFSTNEIYKVLKQNGQLIFVEPTYKNLYLDTIFGIFPQWWSFNDDIRTDRCCLEPSKWFEFLETINFKDTIILGQDNKEILKNVENSIILVQTRKPSQLELSINNSPSTNQFKSFENIILYTDDNQQPNDCSEIIDLLKSLELPIKIINNIDQFNQIIKTQYNNNNNNNNNNNNNNNNNNNNTNNNLIIFLKSVNQLNTNNYKDITFEYVQINQILVKLELEENYKLLLITNNSQSSNYLSNSLIGTSRYLFADIVSSKLDIITIDFDTVSIKNHQNVISVINHLLDSKDNSEREYYIINNEINIERYKNESNIKHQLKSKTFQENKDELMVQLDSNLEYRLKSKSKQELKSTHVEIQVKAIGINYKDYATYSGLIDSIIEIDKDKEKDENYDQNYPSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTSASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGRCIDLSITHLTPFDYMDYNKFKFNVSYGNIELVVLPSKIIKDHLKKMLKAFSLGSLRFIPIVEFSNLNIRNAVEYINQRKHIGKIVVKNDVDFINKLFIEQQQQQNSVENNEILMKDKYDISNLELGKNILLTGQTGIILTILKWLYKHSNNSIENIIIISKSKLKWELELFINESTNNRIKIHYKQADVGNNNELNQCFEELRLRHSIEDINSIFHFAFINDIGQFEDVNMNRMDIAHHAKAIGSLNLHNQSIERKWNIKQFVLASSALSVFGGDNQCCYISACSVLDSLSKYRKSIGLPSLSINFGGVTSTGFVSRSGAVEANLESSIINLITPQSLISSLDLFIQNSQTFSNYTHFNFIYDNIESYSLNRMLFKFDYLINQHSSLVSNKRLGGINENNNIGDLLVSKIGELLSIEPSKLNLDFRLVDYGLDSLVIVQLKNFIDKQFQPHLISILQLQNNKISTTIEIIIKGYNNNQNKKIKNEQSNDIPSVVQKETIKDNNENKDDIKIDMDDKKENLKGKKENIDDKKENNN", "length": 2655 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54E06-1", "protein_name": "Transmembrane protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTIINNDNISLATSAKLSQFIVSGDYKGPFTIIGLKTKILSFSLVIEFILLKIELIKERKDGLKINFDDSISGSCNYELNYTKQDTLFQRFQSKFKIEHTINPENGETINTGITLKKLFIISIPMSILFVALNWIWMLAISMTEVSISTALYLKILKTISVIIFMGGIVGIAITTVGTSKGEYPHAIKGEILMIISAAMWGLYEVLTSKFIGDANRTIVHTYMGLIAFVNLILGIPVIVILNVTNFEPFSVPSISVFGMLLLNAFVGFSVNYLINWGLSVTSPLFVRSGELMVIVATLLFDIIIKHMKLPLLALPGYSLIVIGFILSVYIESRDIKQQQEKEKEKQKNNNGETESLLNY", "length": 359 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EC9-1", "protein_name": "DUF781 family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLNKIILIFFLINNIFSIVVSSTKLNPWVFEERIKLYDILINSTKVEIFGDDNLNNCFQGFKIQLEWQKTTGRSMIIDNSNISVNSWWGSMNYYESIIPFISAMNLGIIQPPIELVNIGDDRFCTDYSECDKELMEPWDLYFQFLIKIKDEKYSYSIQQQILKYNWDGHMKSLSIGLKLFNDKLNYLSKNEIKFSTGFVHFVDIISLINFNTNYSQILPIFDSLPPRMLTNSDHPPFFKGFTRTQNFYTVSVLSINELHENQILWNYFLNLLKTKTENEKCRDFINQEIINFTKYPESTLVKLLLKLLLNNC", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED6-1", "protein_name": "Probable polyketide synthase 41", "gene_name": "pks41", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDSKNLVDENCNKVAIIGIGFRFPNLKGDITPNELWSKLLNRYDGIVKNDRWNESFFKSGDISTNYAGFIPFEELKSFDPLFFGINPSEGIHMCPQQRLLLKCTWEALEDSGIDPIEIRGSNTSVFIGCSGADYQNLNKNDNKVQQEIFSSSTHSISNRVSYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNISKSYSRLNILSKDGKCKSFDAGADGYVRSDAAGIAILKNLNDAIKDDNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGQVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSDNPLLIGSFKPNIGHTESASGISSLIKCCLILKNQCFVPNLNFNKPNPLIKFDQWNLKVVTDPIDFSTLNYINKRVSIAINNFGVTGSNCCLIVSSFKGNQIRNNINNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVVIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNVTMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKKDGVFCAILGSPTSFHTSSQLSVKDEILKISFKSKQPTIPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSDHNNTNNQTRVNLPLYQWEDQEYWKLDNLHQYHLSNGPSINHLGISNSNHTPIKSYQTHINIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGESKTDTNPNKELPDILISFIEFKTPLIFMDGISQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGPNLNEDDEQSLFMYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVDKCYLGYNCSLSEISIIQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEELTYYSSKVPKTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDPLAMEYPTNEIYSCNLQSKDSLIPSLSSFDHIFKRKIPNEYVDQINIYESFIPKLLFSNINKRCPEITIDEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRFNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIIGDGIFGVFDQWWSFQDTEIRKDRCCMKQKTWYKLLKSVNFNDDIRMTPELTCFVIQAQKPSISNLSFSKSETTNYDSIIVFGNKYASNLSNHFIKSIDNGNLQFISTIEELNKIGKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNCKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGIGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITHYSIEKVKESIEFINERVHMGKIIINHENQDSIINELIEKQKSINKFDQSIFKQNYKLEPSLLGRNILLTGQSGIVLEILKWILRNSENNSIGNIIILSKSSIKWEMEYLINKVKLINKLGNFFNNIKFHFKSVDISDSGLIDESINKLLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKLKNFIMSSSVSSKTSTANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIESTGFVSRNESVAALLSGEGFIPISANLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISEILSTDILKLNKDIILVDYGIDSLVIIQLKNWVDKEFSIPNELTIQKIQNSTINSFIQLVKNSMDKNKK", "length": 2542 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ED7-1", "protein_name": "Probable polyketide synthase 40", "gene_name": "pks40", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDYKNKYQSNENCNKVAIIGIGFRFPNLKGDLTPNGLWSQLLNKYDGIVKNDRWNESFYKTGDIPTKYAGLIPFEELKSFDPLFFGINPSEVIHMCPQQRILLKCTWEALEDSGIDPIEIRDSNTSVFLGCSNFDYQNLNKNNNKIQQNIFASSSHSVSNRISYCFDLHGESMTIDTACSSSSNAIRRGYKSIIDGSSNISVVGGINILLDPNTSKSYSQLNMLGKDGKCKTFDADADGYVRSESAGIAILKNLNDAIKDGNNIYCVIDGSASNVDGNGFSDKSNFYSPSKSSQVECIRLALESTNGGVNENDIVYFEAHGTGTPTGDPIELESVSIALKTSENRSSNNPLLIGSFKPNIGHSECASGISSLIKCCLILKNQCFVPNINYNKPNPNIKFNQWNLKVVTDPIDFSTLKLSNKPISIAINNFGVTGSNCCLIVSSFKGNQTNNNNNKSKSPKQYLIPFSTNSIKSLDLYKSRIDNNVEFKEFAENQIKSKSKKLIQRSVAIASNWDEFNLKSNTINTSNDKLTSNMLVSSNKKNATMVFVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLSEYYGFSILEKLRSFNENDLKGIQYSIIAQPSTCMVQISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRSMVQSKTNGLGRMLSISIGENEYNSKYSSRYPELEIACYNSPSSIVIAGKELILNEIIKELKQDGVFCTILGSPTSFHTSSQIPVKDEILKISFKSKQSTYPIFSTVTTNLYDEMNPFDTKYVYDNIINPVRFTNTISNIYKHIELNYSVNNNSNEIIFIEIAPHPTLSFYLKQMVPEDKKQSVSIFSPLSKKKSNDLFEIQKLISELYCLGYNGIGFNIQLSNLNENDNIQTSLSLPLYQWEEQEYWKLDSLYQHHLSNGPSINHLGISNSNHTPYIKSYQTHIDIQKKPFQWLKGHQIKGKYYFPGCGYIDNILKIFGDNSESTTNPNKELPDILISFIEFKTPLIFMDGVNQCLQTNIHSTGKKEYKALFHFKDEKSSSDWVQTSTANFQLFSRGQGLNEDDEESLFKYNINDLISNQCNLTKLSKQELYSHIKTKCGLNYSGDFQRVEKCYFGNNCSLSELSLSQGVNENRSTFFDSSIIDCCLHGSIGLIDENCQLVFEKLEGLTYYSSKVPTTTSQHSKIYVYSKLKPRIGDSYSASIIVMLENGTVLFEMENASFKSTTKIKDSLAMEYPTNEIYSCYLQSKDSLIPSLSSFDHIFKRKITDEYVDQIKIYESFIPKLLFSNINKRCPEITIAEIQSSEIEQLLLKYYKIKEDNDNKWLSRLFTFAFESIKQWYHNEDYDFENVLSPHNFKIFSKSTKIISKLLFPLENDNDEDSPQSLFEGGLLDKFYSSGFSAQNELVGEIIQESIKPILNEKLVFRILEFGGGVGSLSLLVLEKINSLLIQYPNYQIDIEYTWSDISPSFITEAKAKFEKFNDRVNIIYKALNLEQPLIGEKQGLKPQYFDYIIMFNVLHVIKDVKYGVEQIYQLLVPNGHLLFIEPIYKSIVGDGIFGVFDQWWSFQDTEIRKDRCCMNQQTWYKLLKSVNFNDDIKMTPELTCFVIQAQKPSISNLSFSKSETTNYNNIIVFGNKDDSNLSNNFIKSIDNGNLQFISTIEEFNKMTKYISNESIIYFIKSIDELSVDNFVNITHEYTQINQKLMELNSKCKHVLITNDSTTTNYLSSSLIGAARYYHECPLELFILNFDTPSIIENQNLFKTIEPLINSSINIQREFIINNHKVYYERIKNETKLKSIFKNSSSFESLEQVDNFMISLTPNLEYKVKVKPTSILKENEVEIKVMSTGLNYKDYLIYAGLVESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGTGKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRIVDLSITHLNSNEFTDNKKFKYNYGYHNIELQYVDKKIIKSTLSIISNAVSSNDLQLIPITEYSIENVKDSIEFINERVHMGKIVVDHENQDSIINELIEKQKSIDKFDQSIFKQNYKLEPSLLGKNILITGQSGIVLEILKWILRNSENNSIDNIIILSKSSIKWEMELLINKTKLLNSNSINSMGNYLNKIKFHFKSVDISDSGLTDKGIHELLIENPDINNIDSIFHFAYTQATCNSDEVDLHHLTQSHSAKSMGAINLHNQSIKRNWKIINFIMSSSITSKTSSANQCGYISSNNVLDALSKYRISIGLPTICTNYGLIQSTGFVSRNESVAALLSGEGLLPISTNLILGTLDLQLQNQAQSSNLILSNFNFTSLNGLPQKSLISKFDYQININEENEKSKSLLKDDNVELTVDQLITFKISELLSTDILKLNKDIILVDYGVDSLVIIQLKNWVDKEFSIPNALTIQQVQNSTINSFIQLVKNSIDKKNKK", "length": 2552 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54EN3-1", "protein_name": "Alkyl transferase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNCSNNSENCNINDNKKKEENVKNQNSNKNSNNNNNKSNIESIILNKKSKFSSEKELDEKENKDLKDLSNNKPINIDEYEGLPRFENEQNARSKSSLWSKLCDWMYDQNFKIASSTLKNGPIPKHIGVIMDGNRRFAERNHLETKEGHKKGFNTMLDLCQWGLTLGVKIISVYAFSIENFKRSKSEVQDLMELANNKFTEMISKSHKLQQLGVRIRVVGDHSHIPEKTKSILAKAVKSTENNTKALLNICLSYTSHEEILHSMKILSKGVNQEKKIEIEDIDQDLFENCLYIKEDLDILIRTSGEYRLSDFMLWQSCFTNLALVNTLWPDFSFFHFIYIIFLYQFNSKTLKNEIQNQYKFNNNNNNNTDNNNNLKENIKNLKSDQRVKEFINHLKISEEKLFDEFISKYNEEEEEEEEI", "length": 420 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54F52-1", "protein_name": "Saposin B domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLIFIVCLLLIFNYFIGISFGNKQINSNQQQQIINTDKNYNHNKNNKIIVSHNKNNNNNNNYNEIETENLGCTFCKYLTEKVEEYLQANSTEKEIISYLDEECELLNSPNLVLTCQNLVQQYTPIVIELIDNNESPSVICENVNICPTSSSSSSSSSIEEEIIKKLNIDDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEEEEVNTCEICNLVSNLIEKYIKINNEVDEIRELIENECELLSNSKVSSCYSLVDQYFEHFYVTIENNYSANEICQLFQFCPIESSSSSSSSDIINNIPLQDSGCTVCTVLANYAYKVQANESIPEIIGSMDEICNKIGAWRDICNSIMRSGGQQLVEDIVNKGEGVYTACSNIGYCQSSSSATGTSGFSSGGSGTSTGGGYSTGDFYYKPLK", "length": 416 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54GT5-1", "protein_name": "Endoplasmic reticulum junction formation protein lunapark", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLFSKKNGFEKQLLDMETKILNLEDKLSNSRIFHQKVLHKIVLYSFAIEFFIILFTYVKSRSLESIPEKLFCCIYLVLFPIFILILTKVYGFVYKYLIKKNEVRLDSLKTGLQKKLDERKRETDYENTQKLLDRYEKNPPSPTNKPLGPPNLNNNNNNNNNNNNNNNNNNNNNNNNTLGNSMRNRNQPFNISSQQNQQQQRMIQPQQLSPQQLQLLQQQQRLSQQIVPSQQQQSQSQPQQQQPILNQPYNINNNNNNNKPPPPIQLPPQQSSQYIGNQQRLPPQQYQNEQKSKWWLDKLVDYLISDGPTHGSPLICSNCHSHNGYVPVEELSNIQFRCRVCKTFNQRDSVNNSTTNDDRNNSQNTGSNQQQSQSLQDQQPSIEEIDKNFSVTEQKNETNNENYSDSEKQLEENNNNNNIDNDSGSSSSQNTPNKKKGKGKGKGTPTKKTN", "length": 452 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H60-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MLDFFHLKDVDEFFRLLEKKNLQNLDNQIDGPGNLNWRTTYTEKDFSKVPKFRGIIHIVQIRDLGTKIHRDLLYEIMFEKLLDIARLNNESKLLKNEIQDLKTKLDEYHNNNSTTNTDLIINSFINVIDTTTTTTTTKTTMGATSIDKKQSEGDSIDKSIELDFFKIKSDQSQQSSPSHKLEEKQNQVNNITNEIPQESIKTVKQQTQTETNQQTFSSTSPSHQNEEKQDKQEEVKQEEVKQKEGIQKEDKKEEDKKEEGKQKYGEIFIIEIPQEEEKQKEEGKQQDGENFIIEIPQEEDKQKEDKKEEDKKEDKQEEDKQKEEKLEDKQKNGEEFIIEIPQNETLEIKVDTHPRSSNDDVSTAEMEVEALKTPLFAETTFVTKQQVITNKKLLVYKQSDFFPNMTTLLQSRLKDVTVQEVKDLTKIGLNDNSYSVGDFENVFVLYAVSCMGARTDSERDAFKIKSIRSIIGDKVPIIYGVFMIGKNGPTRIKVEHTQTSISITHSMSDIGRNLQNNENLKQLQSFLQQ", "length": 529 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54H72-1", "protein_name": "Tudor domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNIDFEDYEFYDDSDFEINTVDESVMTYSSVFDFLRFGKIPKFDTQTKMKHFKDNISKYRIESKDILHTNVDSKILRRLSEIPRVEKIFPDPNTLQLEVFKPNHELRNSNGELLSKHRPLQETLKLIEKQYYWECKFIHTSMEVDITKLYSFCDLCSQSSVSRDMDIDSNDEDKILEQMDIVEKSFSNDRNNNNNNDDNNKSIDEKDKMNICGIGIDLEAIKEGKLFEDELAEALGFPEYNSSVDNSFNSSVNNSNLNNSSLNNSLNNSKNNNNNDDDNNNNNNNNNDDNNNNNNNNNNNNNIISNIDNNNNNNNNNNNISNIDNSNNNNNNNNNNNNPVNDDFSFIIPKDYQSKNHLNDNENKDDEKDDDKDDDKDDDKDDKDDDKDDDKDDDKDDSKDNGYIKTNVSLSSSSSSDNERDDGDSHSDKSVDNDENNNNNINNIISDCNNNNNNNNNNNKINGRTFTSRRTRSDSNTSNSSVGSYISNSSKSSANSYDFSSSDQDYKSPNSPTVKKTRGASLVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNSILKPKLKSKRASASTAINSFISQFITPKHPPKSSSRLKRANRSNDSSDSGDSSSNNSSRSSSDSSDNENNNSYYLPIQSRRSTSKQILKDHLKSPTKKPRRIIEEDFYHVEEKKSPTSKISTPISRSASYNFGRSSPGSSPGSSPSLSPYSSPPQSPPHVYNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNNNNNNNNNIRSILKSPQSPSISPIKTPRRSPQQQQQLQLQLQNYIPMPTKTKTPTKAPYVPNYALAPIEPKPTQKTPVHVFGGNQLSVKKRQTIEDMITEVLKMNVDTAALKLPLPKVGQHVEGKSNMEDYKDAWFKGVVKEVLPNDFFLISYIDGGEEELSYTRLKPNLTSELEPLKLEEIVVGGEYLGSYRNFYYNVYVLEILRHSIRVYFADLEMAKTIKYSQLYLLSSFVKR", "length": 998 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54HE0-1", "protein_name": "Conserved oligomeric Golgi complex subunit 5", "gene_name": "cog5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNNNNNNNEGVSSSSSSSSSPLPNISSPNLISNSNIENDIEIKKKSNNNNNNIFEGDNSHIYNQFLGEDFNVVHYTSNALKVSSISLSLNTLTSCTRELGQELTENITTNYDDLFKLANNIKELDQLTDTLKLGVSNLEESIQRMKNDISEPYNKVKSHIGQLKRVQDSCELLRKLIRYIQLVKKLKNHLQAGSRDLSKSAQCINEINLLKKDSDLTGINIIDSQVVWIKTCSDQIITISSTLLYQGMENQNQTDVANSLQVFHNMTILNEKVYSIVNLTTEKVIKNIKALLNVNKLIADLPKTTITNNINNNNSNNNITTNNNNNNYNNNNNNNNNNNIISTSTDKSIWLKFESLIDTLYSSLIQILHLQRVLLKIKDPLTHKSLMEVLLIKQHQLQQQQQQQQQQQQQQQQQQQQQQQQQQQVGTTSNNTQPILIEMISTLFWKSILKVLENNLLVAAKSSNIIENTFIREYPKVSKFFLDFIKKLQNYIDIHQMDIQQQFMIVLSNINQIIGNNNSNNSNSNSNNSIESSLSTSSSSSSSSSSSSSTTTTATTSLILLSADDYKLSLFKSIGLFEKAYLEYSQSKMSTIVNGLFPQSTWSSRSTLPVIPNGKQLVDLSKTIWSEIEWLVGNNDRQLLGKLMLVVSKVIDLFSSKIESMVQPPGLIVLNSNIGSSSSTGGVNNNSNSNNNNEIITINENSKPTPSQTVNTLLFNVSIQLNSSIQSLLTSQPLERESIIVIEKSLNSLITICTNIITPLMNSFFTHIEQIFSTIHNEDWYNEKTTKMLINKSNQTCSSYMESFKTLVNYFQNQYLMRFTPCQLLNNQIKSMISKIFIVYLKYCSLLKQPFSENGKLKMVNDLTHLEFAVTPLLVSGGIKEIGESYNLIRNYKQSIFN", "length": 898 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54IX3-1", "protein_name": "Probable polyketide synthase 26", "gene_name": "pks26", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METNNNKNIQEDIAIIGFRIPGCQDNTPSELWNNLMNKFSGVGKTTERWSDNYHLSGDINNGNSGLLPLKEWKKFDPAFFGINPTMVSTIDPQQRILLKCTWEALEDAGIDPIKLRGSNTSIFIGCSTGDYLDMVKSNNEIQTNLFGSVNHSLSNRISYCFDFHGASMTIDSACSSSLNTVLLGCQSINQGKSNLCIAGGVNFILDTTIPTAFSFLNILSKNGKCMTYDEGADGFVRGEGAGLVVLKSLKDAIKDGNNIYCIIKGGNTNVDGNGNADKANFFQPSKQSQSDNIKLALESIKKKSMLDIDIDYVETHGTGTPTGDPIEVEGISKVFKENHSPENPLLIGSLKSNIGHMEAASGVTSLIKCCLMFKNKSFAPNVNFQKINPKIKLDEWNIKVVTEAIPFKKNKITSMVVNSFGVTGSNCCLVLTESINNNNNSNVDKITKNEKEYLIPFSANSNQSLKNYIEEVSKIDESLQFEDFVYKQLSNKSTSLFQRFVVTSKDWKELKYKLSQPLPLKEISSSISVKKPNPITVFVFCGQGSQFNKMGLELYNNDKNFRNYIDRFDKKLLEYYGYSVISKLRSIDDNDLITIHDPIIAQPATAILQISLFELYKHWGINPSFIVGHSLGELPMAFCSGMIDFDTVCYLLYHRSLAQSKTNGCGKMLSCNISSEEFVKNYSPRYPFLEIACYNSPNSIVVAGKESILLELSKEFKNSGIFCAMLGSLSSFHTSSQLEVKDHIYSLKFESKEPVIPTFSTVTTHLFNSNKLYDNDYIFQNIMKPVLFNETISNLYKHVENNQLGSEMIFIELAPHQTLSFYLKQLIPKDSNYFSNSNSITILSPLHKKKNDYLEIQQTISTCYCKGYDVNFKSQILIESKTNISNKSLPLYQWDDKEFWKDLEKQKRILQGPPMDTLGFSNEKSPILKSFETKIDIKKKPFQYLKGHIVKGKIYFPGVGYIENLLKMYPSQDIDIDSMEFEAPLILIEGIVTCLQSNVYKIGKNEFKVQFHFQDQKTKQWIQSSFANYHLSHRDDFDPTTNKLNIQNLISNNCNLTKLSKNQFYNFIKAKAGLSYNGEFQGVEKCYLGDNCSLVEIPFDTSNQDVETNINMIPILDSCLHGVHILYVEQCQMVLEKIEGLKYYSSTLILSKQKEQQKLYVFTRIENKDLINNSISASIIVMISDGTVFFEIESVSLKSLIPLKDPISIENPTDELFSSYLQSIDSLISEPSSYKSIYKRNEFISSGMSDLSRSDYQQFISTLLYTNLIKRNQSIESDLRNQIEFEEIKAKYCKNSKFERLFTFVIETIKQYDGINGNLNSWNEGNIDIYKILIKSTRIISKLLFPLQGEDTTIDTPQSLFENNLLDDFYNINGNTVIQNQLVGEIITQSIKPLINEKMVFRILEFGGGVGSLSIVTLNKINQLLEQHPNFQIDIEYTWTDISPSFIPDAKKLLSNIKGVTIIYRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKEIKFGIDEIYKVLSPNGQLLFIETPYRMLICDSIFGVFDQWWGFTDTGIRVDRCCMKQKTWFKLLSESNYQDIIMSDDIKDCCFVIQAKKPSISSLEYKLKIDSQENDKIIVFGENDTFMKYLENKSTKQIIKIKTCQQFSDLITSNSKEINNQSIIYFIKTLNQLLIENFKEITLEYIQINQLLLSSGLSCKHILLLNQSTSENYLGSSISGAARYFDEFPPLKLYSFDFDKYSLNNESINIIDDIIEPIIKSMNNSNIRKELLVRNNKIFFERYKQEKRIKENYKSTSFENDKSLFVHLNANLEYELKSKQVKLKQNEIEVNVKATGINYKDYLVYTAMTPSELINHKGESNPEFGHDFSGIITRIGDDDGDNDNEFKVGDQVYGIWFNTTASHIIVDKEFLCHKPSKLSHTIASSIPVVYITSLYSLYNIGNIQNDESILIHSASGGIGLSALNILKWKNHKSHIFVTVGSKEKEKYIHDTYGDFITGIYSSRNKDYLKLIKRKLTELGSNKKGVDIILNTLSSSEHMVSNFKCLNHRGRIIDLSITHLNHNEYTCNNNFKYNYGYHNVEVLFVKGDIISKLLKNITSAIENGSLSTGIPIIEFNDSDCFNAIEFINKRQHIGKIVVNHNKENLIQELIKKTNLPIIKSNYQINSDHLGKNILVTGQSGIILEILKWIVKYSTNVENIIILSRSSLKWELELLVNKNKNKLNFIYKSVDVGNSLEIEKVIDEILMENPQINNVDSIFHYAFTQISCKEHEIDQVHLNVSHQAKTMGAINLHNQSIKRNWKLINFIMASSAAGLIGSTDQCSYVCSSNVLDTFSKYRKHVLGLPSICINYGLIESTGFVSRNQSVAVMLDGQGIRPMQTNQILGSLDLFIQNPSKSTNIILTSFNFNEFATGNLQQSNVHKFDFQFNCCLSQKSKLMANNQASENPVKDLLINNICELLSIDESKLNIDIRLIDYGSDSLTIVQIKNLIDKNLLIPNLISIQMLQNNSISDNIKILTDSYNKKKQNEQNELKNIKVGSFTKK", "length": 2531 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K45-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKILYLIIYLTLTIVKGAPLYNCKKLNCSSMNTNCKVFGCSPMFGCFETSKCPQSNVDICHTNHCDENTGSCYQIADTCNDGNNNTIDSCGPYGCVNTPVNPPEPTQSCEQKCNDNNPCTVDFCDFRGDCYHYETRCSDYDACTLDTCGEKGCEYRPMNCDDNNPCTADFCSMLYGCYHEPIECSVKVPCRTDSQCNRNNFCETYSCDLSSNICDYYTRDCGGNPCINNECRTGTITN", "length": 239 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K50-1", "protein_name": "Phospholipase D Y", "gene_name": "pldY", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIINRLFIIIVLFFVNVNSKIISESTLNSCQGGTIQIAESIPLGLDISTNLSTHDAWMDLITNAQESIDLGFFYFTLLGGSDLDPVYGGQLGIDIFNAIVEAHSRGINVRIVQNEPSESFPDTETQTLAKLGIQVRSIDWVSLVGSGVLHTKLIIIDESSAYVGSANADWSSLAQVKELGIVLKNCPTMVADTEIAFQQYWNAADFTSLPINDWGSNYQALFNNTNMASLSLNNNNNNNNKNKNNDNDGSGTNQMYEMFLAVSPPQFQSTYRTGDIDALMDAINNADQSICITVMDYTPTTLYNDPNTYWPLIDNALRAAAFNRNVQVRMLISHWNYTSPIIPQWLHSLNQVDNIQVRWFVVPDFSTNPQIPYTRVNHAKFMVTEKQSYVGTSNWSQDYFTVTGGLSYNVFNNDFTNQLQSIFNRDWNSPYTQPIQNF", "length": 438 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54K65-1", "protein_name": "Band 7 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNSIKKLSTTAIKFTKQTQRFNKRGFFKILNQYERGVVFNFGKFHTVKEAGFHIVIPFIQKCDIVDIRTFTYTLDKQKIISKDNINLTVDALVVFRIHDPKLAVTKANDCILLVNEMAQIKVCEILSHNTLDQVLHNRDKISNQIHDELKEALNKYGVTIEYLKLKDIHFDETIAKAIAKKVEAANLRDIKN", "length": 192 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KF5-1", "protein_name": "Protein LEG1 homolog", "gene_name": "leg1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSNKTIFLILLFLINFNSIYSFNFKKEIKISNDKINLPTYNPWIFQDRFNLYSILINSTNIPVFGEDNSNNCLHGLQLQFEWQNRSGRLEINQGHVNTKSWWGDMNYYLSIIPYLSAMKMGLVPVVEIVSINDQRFCSTYEDCDQEVLNNWDNFFQQIINIRNNGSEGDDQQLLKFMWTAHIGSIDKATKLFTDSLLLLPKNELRFGNGWAHFVDVIATVNFNTNYSTVYHLGQQLPPIMLNSNDTHPSSIESFTKEQRNVVLTMYEINDLSSNNLVWNSFMYLLKKMTKNEICRNLINNEINIFLNSPVPTIIEILFDILTNNC", "length": 326 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KK9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTEVPNQKHNDGGVGVTVGNFVKDNETNVNNNNNINGKGENDNNNNNNNNTIIDEPKLLNNNNNNILVIPLTTNIIDNELNQQKQHTLPLPLPPPPLPTQPQQITPPLPTQTQLPNNMLPSPRPIQQPKIRQQTQQQQAQMQQLQLQIQQEIQLQLQQQQQQQLQLQQKQNESEINGLFSPNFSSSSSSSLSTTPNMHSPLFNNNNNNNTTTTTTTTTTTTNSSTNNTNSSTQTKNASTNKISQDVIGVFDDTDTESEGEEYHSGRSIDFWNKDYKDIAWRCNWIDLQIRDLQYQSMVCDQLYHKVRRSKQKIIPDNKSLSSSIDNNNNNNLKSIPIETIDHSNNAITSSNIPYSNNEEEQQEQQQHPSQSIRTTSVVKLRKPRKLIRRPTVKLSAKQMTTDLEAHPLFTFHKGYFKFENAIKTNIINEMEIKYQEKEKPPKLLTLSEERLKQYINSNEDVDVVNLFATNESKRLSEKRRGRIPSDKKEKVSSHRLKSGDEIDGTSSSTATATTATTTTTTTTTTTTTNKKSRRSRREKKKEKEREKQEKEKHIKTKDEQKDREKKEKAREKELEKERKREKERIKEKERQEKERLKKEKELEKNKKKEKKLLKEKEKEIKEKKVKLKNQENIIEKDLTINNTTTKTTKSKKSSSKVKKSEQEGVKLENVEIEDEEVEEEEEEEEEVEDEEEEEEEEEEEEEEEEEEIEEVEDNEEEKRKEERRRRRRKRRILRRRKKLRRKQRKRQLFLQKQQQQQLLQQQQQQQQQKLLQQLKKRDESNGLSYKEIITPEWRDISSFANNDPSLPSPLLLSNPLLAQDIKNITTTTTTITTSEPISKFSTITEEELLIRQTTNGIDGTPMNGIGEDSESSGSEIELDEDAMKIIHARNEIEEKRRFFNTIKQIQMENPVPSYKRKKESLPVEFVAPTVEELLPSYHFNKKSIKLLGKSWNGDFEYYSSSDEDDYDDSDDYDSDDDNDDEDDDDSDSDDEDESDSDDYDSEYDSDLSDSDDSESESSDNELDGLYSSESEINHNSSGDEDEMDVELNNHHIPSKNSKNSKKQPVNNNVNNSNNLNGSSGGGKINSKPSKQQPRNSKANPPSKQQPTPLKQQPTPLKQQPTPLKQTTTPSKATPSPKQQSQQQQQQQQQQQQQPQQPQQPQQQQQQSPKPTPPLVSTTPPLSSVPLSPPTKTIRSTRGVSSLSNSTSSLPKQTNTPPISILSRKRNQSQSSVTDAPLSPTTTATTTTSPKPTTRRKGKLQETIPVEETKIIEETKPFEETVPIKENSTTTPLKRTRRQTKQQLVNGETTTPLTNGDNHVEKTDSNSTDVKVDPTSWWGDKQYKIQPVMEATVIRFKRVKNDDGDDDDQIQNNQKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNINNTEDLESKIKETKSINIPMEISTNGNDFQMKEKEGE", "length": 1472 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU3-1", "protein_name": "Probable polyketide synthase 25", "gene_name": "pks25", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNSYLNNPQFDINNGNKEVTDDDNNKNNQDNLVAIVGVGFRLPSGENERNNTPQALWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGITPNEAQTIDPHQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGSSTNDYLTLNRNEVKSNVFGSMAHSIANRVSYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDPYPYKAFSILNMLSKSNGRCKSFDASADGFVRGECIGVVILKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPNGDPVETEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNENKNTSMIINNFGVTGSNCCLVLSQFNNTNKQKQQMKTKINNYLIPFSANSVESLKKYQSLIINSKENELKYSFEEFVKNQVFIKPTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKRSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGLGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGAGYIDNLLKLYPNQDLTINSIEFKTPLILSDDNGQFLQTNVYQTGKSDYRAQFHFKDNRTNVWVQTCTANFQLYNNGKVDKLNLEEIKSTKCNLSSIPWDKFYPHIKNRTGLNYKDKFQNTIECYLGDNCSLTEISLELPENFHDQESFFNTPILDICFHGSIVLIKDNCKLVLDKIDGFKLYTSNIPKNRFDHLSIFVYTTMKSTKSNSYNSTYTVMLEDGTVILEVENLICTSLTPVKDPLLIEIPTDMYYTPYLQSKDSQIQSPLEFKSIYQNNQDNDSLLIPNVVLETIKPLINEQMEFRILEFGGNNLSNSTLLLNSINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIKYSLNQIYQILTPNGNLIINEQQPNNENNENNEDSLKNLLVNCNFNSDIMMKSSSVSDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCNQDEQFQQQQQLINKFESHYNNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSITFEYVQINQKLYEFKSKCTHVLITYDSQSSNYLSSSILGAARYFDEIPTLQLFTFDFDKDSLINLDISVIDHLIDPKQNTLIEFFIKKNGKVYFERFKKGLKKNSFKSESYHQITNEQEILISKLDENLDYQLKSKDSILKPYDIEVEIKATGLNYKDYLVYSGLIKLKGDSVDFGLDFSGRVSRVGIKSSKEFKVGDEVYGIGQSTSSSHIIIDSMHACHKPSKITHVQAASIPAVYATSIHSLYNIGNLREGESILIHSGSGGVGLSALEILKSNNHSSPIFVTVGSEEKKQYLINTYGNLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDSNFKCLNPEGRIVDLTITHLNPNEFIDNNKFKYNFGYHNIELYYCEKPTIKKLLQSISKSIENNTLNYLIPITEFSNSNIKKAIEYINERKHVGKIVISHDTDITNKLIENQPKIDYSLLKSNYKIKNLGKNVLVTGQTGLILDIINWIMKYNSTVENIIILSKSSMKWEMEFLINNNKTKIKFYYKRCDIGGDSDSINKTFDKLFTENPTITNIDSIFHFAVVQITRKVKDIDMKSLNISHDAKTIGAINLHNQSIKRDWKLSNFILASSILSKVGSLDQCGYVSACCVLDSFSKYRLSIGLPALSINIGAMGGSGMVARSELVETVLNGQGYNLTSTNQLLGTIDLLIQNPGQESNNLMVGNFNFPVFNNFKQKIHQKFDFIFNALDSNSENGDGSNIKNSTNIKDKFLNKVSEFLSIDSSKINNDIKLMNYGADSLITVQLKNWVDKEWSPNLITIHQIQSNSIGMVCQIINDNFEKKK", "length": 2380 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54KU5-1", "protein_name": "Probable polyketide synthase 24", "gene_name": "pks24", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQNKINKAEILQVDDKHVEENLVAIVGVGFRLPSGSIENERNNTPQTLWNNLINGFDGVVKTSERFNDNFFKNHEIANNYSGLLPLDEVKSFDPLFFGINPNEAPTIDPIQRLLLKCTWEALEDSLIDPISIKGTDTSVFIGCTESDYHNINKNEVKSNVFSSLNHAISNRISYCYDLHGNSITLDTACSSSLNAIALGYDSIKNKKSKMSIVGGVNILLDSYFFKAYSSLNILSKSNGRCKSFDASADGYVRSECIGVVVLKNLKDAIKDGNRIYCTINGASANVDGIGYSDKSNFYSPSSISQSENLKNAIQSTNGTVKPSDIDYVEAHGTGTPTGDPIEVEGISKVFKDTRSTDTPLLIGSFKSNIGHCEAASGIASLIKCCLMYKNKCFAPNIHFKTPNPAIKFKEWNLKVVTEPIPFNKFKNTSMVVNNFGATGSNCCLVLSQFNYNTINNNINNHNNNHNHNHNHNNIKINNYLIPFSANSVESLKKYQSLIIENKEYESQYSFEEFVKNQIYNKSTSLYQRSVIVAKDWNDFNNVENQVKYQTSSSTSSNITITNKNNNPITVFVFCGQGSQYNTMALELYKNEKVFRNSMDMLDNKMKNYFGYSILEKLRAIQDSDKCSVHEQTMAQPSTVIIQVSLYELYKHWGIKASFMLGHSLGEVTTAYCSGMIDIDQLCYLIYHRSTLQIRTNGSGKMLSINISSDEYKTNYMSRYPTIEIACYNSPSSIVIAGNEQILNEISKELKEKEIFSAMLGSLSSFHTSSQNIIKDDILNLNIQSSQPVIPTFSTVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIEIAPHPTLSFYLKQMIPKQSQYFRNGESISVYSTLHKKKNDVEEFQKSISQLFCDDAYDINFKCQFNNINSNIEAISNFNLPLYQWDDQHYWLNKSIEHKNNLIGPPISILGNSMQDSNPFIKSYQTIIDTGKDAFKYLKGHNVSDKCYFPGTGYIDNIFKLYPNQDLTINSIEFKVPFVLTDGIGQCLQTNVYQTGKSEYRAQFHLKDEMNNQWINTSNSNFHLNSNDNYHEEKQKLDIQDIKQTKCNLSSIPWDEFYSLMKTQLGANFYGIFSKVVECYIGDNCSLTEISLELPENFHDEQSFFNCPLIDACFHGTVILYIQKNCKIVTDKVEGLRYYASNIPKNRDEHSSIFIYSTLKSSPSDDLLSSSIVVMLEDGTVIIEVDNLVVKSLTPVKDPLLIETPSDFIYTPYLQSKDSQIQSPLEFKSIYQNNQVDDGLLIPNVVIETIKPLINRKMEFRILEFGGNNLSKSTLLLNEINSLLEENPHYEIDIEYTWSDNNSSILKDAKLELSKVDKGYLSILYRSLGLDVDNSLLEKQKLNPSYYDLIIVSNISNLTKDIEYSLNQIYQILTPNGYLIINEQQQQQQQQQQQQQQQQQQQQQLLNNENNKESLKNLLVNCNFNSDIMIKSSSISDSDIKSIIIQAQKPSLKLQPKTINTFDQVILYCYQDEQLQQQQLINKFENHYNNCKIIKVSTIEEFYKLSTTITNNSIIYFIKSIEQLTLENFKSVTFEYVQINQKLYELKSKCTHVLITCDSQSSNYLSSSVLGAARYFDEIPTLQLFTLDFDKDSLTNDLDLFKTIDYLINPKNNIQREFYIKNSGTVYFEMYKKELKNLKNSYKSESYHDLSKQQDQLVSKLDEHFEYQLNSKQIDLEPYEIEVKVKATGINYKDYLKYNEMIKVNEAGIGFDFSGVVSRVGIKSSKEFKVGDQVYGIAYETSSSHIIIDSLLACHKPSKITHVQAASIPAVYSTSLYCLYDVGNLRDEESVLIHSGSGGVGLSGLEILKSNNHSSPIFVTVGSEEKKQYLINTYGDLITGIYSTRDTNYQKQIKNKLIELGYETHGVDLIINTLSSEFMDTNFKCLNPKGRIVDLTTTHLNPNEFIDNSRYRYNIGYNSIEILKVGKSTIKKLLQSISKSIENETLNALIPITEFSNSNIKKSIESIKERKHVGKIVISHDTDIIDKLIEKESMIDYSILKSDYKIKNLGKNVLVTGQTGLILEVLKWITKYNSTVENIIILSKSSLKWELEFLMNYNNNNNNNNNNNKIKYHFKKCDISNWNLINKTIDQVLKDNPTITNIDSIFHFAALQINKKLKDIDMNSLNVSHSAKTFGAVNLHNLSIKRDWKIINFILASSVVSVLGSFDQCSYVSACCVVDSLSQYRKSIGLPSFTINIGGVSDRGYLSRHKLVEAVLGGQGVELISPNQLLGTLDLQIQNPNMPTNAFVNNFNWPLFKSFKQKLHQKFDFILNPINVDNSISMENDTNQSSSSTNVKNKFLNKVSELLSIDPSKINTNIKMINYGADSLITVQLKNWVDKEWSPHLITIQQIQSNSIGMVYQIINDSLDKKKKEMDEKLLPITAKTTTTTKNDPNDKTEYKYIAGGDCCREFSIKFHYSSVVNFII", "length": 2471 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LI2-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "mcm2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSQNNNNNNNNNNNNNNNNNNKRKTKTPSSVNHNNTKINEDKDLYNFIDKIRDKTDKSHLEDEYDEDDNTKDGKFNKVEDEIKNDIDSEEDDDDIIEDNEHLYDGDEDSENLSSEGEGDDLLDEDLQDQDEEEVLGDEDNHYEMEGLDNETYEDIDKDKKTEVDSILTKRDREEQKTRQATNRHQYRISSFLLDENDENMVDEDTENNKLLEKRKANLIKKRRETIRQQNDNIKKDYDGSVPSFKDGFVNSERYFEDGDGDDDDDDDDFDIGDNGQVVNLEEPDKDKCLREYVCMSGPRNEISKQFAKFLLEFKEKDGFNPIYQESIQKMCAANKESLMINFTHLCASTVFGVWVAEIPTEMIEIFDEVALKVVLRIYPNYRNIVKSIHVRITHLPICESLRDIRQSNLNKLTKVGGVITRRSNVYPQLKHVKYDCVKCKTTLGPFSLDGTFNDSKPPIGLCPQCQSKGPFVMNSEQTVYRDFQKVTLQESPGTVPPGRLPRTKDIILMDDLIDTVRPGEEVEITGIYKHNFDLKLNYSQGFPVFSTIIEANHINKKEDLLSSFILTDEDEREIRKLSKDSNIAQKIIQSIAPSIYGHEDIKTGLALALFGGTPKDVNNKHRIRGDINVLLIGDPGVAKSQFLKYVEKTAHRAVYTTGQGASAVGLTAAVRMDPLTREWTLEGGALVLADRGVCMIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLTARCSVIAAANPKRGKYDSGLNLLQNVELTEPILSRFDIICVVKDTIDSFKDRELARFVVASHINSHPDNQNNPENDYLNRATKQSPISQELLRKYIIYAKRIKPRITDIDKNKISQLYTDLRRESRAGGFAMTVRHVESIVRMAEAHAKMHLRDYVTDFDVNTSIRVMLDSFINAQKNSMYKNLRTKFAPYVIFQKDINQLLTQLLQTLARDFSNYHFARSGDIPDQINIPYDDFDTKARELGISDITSFFRSNEFTSNNQFTLKKDKSTIIYYRNK", "length": 1008 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54LX5-1", "protein_name": "U1-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKITESNNNNNNNKKDNNKHWCKYCKIFIQDNISVKNHEEGWRHKNNVTRFVSTQNRDKKYQERDQKEAEREINRIKNTGARSFREKDLSRVLDEKKHQQQPQQQPQQPQQQQRIFNNNSNNNNNNNNNNNNNNNNNNNNNNNSNNNNNYHQPQYPTTTTTTTTTNTTASNKNCDNADSKFKEIQEQQRQLLSNNDYYNYYQDRQQLIYDYYQNEGNQPIPEPPLNTSLYGYTESPLLKSRLDSSTDTLSSSSSSTIISPSHQKKRKQDDTNSPIPAKISKDECVNNENKDKSNEKENELNNNNNNNKSGEGEEGEESDDNDDDEEESGSGSESESESSEVDQSESIIGQWQTVDPIESAFGSTRKDSDDEKDKKDKKNKKDNDENKRDEKDYSDVSDADSEEESVNITKRAMANHKKPITLTNVISPTIPSTSKNFESVLSFNKSGVFSLNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEPPQPTPQITLKFNKPLKQRNTRKTNIEDKQS", "length": 514 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54M95-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLISILFFLFGILFFLKNVESASDVVCSFGYQACGNNCYSPSSGQKCYPGGVVCSFGYEACGNNCYSPSSGQKCNPGGVICSFGYQACGNSCYSPSSGQKCYPGGIICSFGYEACGRSCYSPSSGQKCYPGGVICSFGYQACGNTCYNPSAGQRCFN", "length": 158 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54N59-1", "protein_name": "G domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDLDYAIIVLRHHLESNGRFFEISKDDVKNRVTIKNKLTQEERYIDFGEIQNFIQYDEFEYNLLANGFQENLSILKNSILPLTKAPDSCSSNRGKTIGNSSLLINKVNGLIDDDKDTIYLLLIGITGVGKSTFVNMVVNYIEYSNLKDALENATLEQIYTIASKIEIQDENKTHKFSLGDVEDYKIGSSVTQYSRQYRIKLPDGKTLCLIDAPGVGDPQGTLQDNKHFENILHEISSLKKLNAICILMRPDETRATVLFKYCLNQLLLHLHSSAKDNIFFCFTHTRGTMYKPGPTRAILEDHLKKMKDQSDIEINANEKTFCFDNESFNYLAVKKYNATAGIETNFSEDDEFDFGRSWDRSSKEFKRLLEEISKVQPHDVANTICINNARTMISNLAQPMSTCISNINTNIKLMEQQSEKLRNNSIGDESLLYIPVSVVIAEKLENSLLVCTKNGCSSNTDNPCNIDVVSPKWYSSLYWCDNINKMGTCKKCSNTGVLPCLWFDHQVVTIKETPQLNQLPGTDKKTIGQRTKSEIFNERELLVTKMGERKIQFQEEYDTIKTAIVDFSVFLWHHSLIKFNRYYEDYINMQIKQLENSENSQELIQKLNEHLSEYKASVEEIKHNVQNNKASVKTQKEIFATFDKLLTLPNVGYIIQNQIKLKQSSHYKSEAVEIDLFSKMKNKTKQIIK", "length": 689 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ND5-1", "protein_name": "Multiple inositol polyphosphate phosphatase 1", "gene_name": "mipp1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MMVKIKNIIILFCIFGLLSNVSSLSSSSSSSQSSDNNGNLSPIQDYDLEFLSKHLTTKTPYWILTKNGDSNSQGDGSSGNSNSNSNSNSNSNSNSDSSNEPPEQCKLISIDFIARHGSRMPVLNSIEKLKEMTTSILEYKEQVNQGFNWIFNYSVPYPSDIAGNLILQGQYEHYNISKRLLKKYPLFFEPMKYKPQSYSITSTAISRTGISASAFSYGLLQGTGSLGVDGFQPVFIETASLDQDILLRFFATCNQYVDQLKNGTLINKDEQTKWNQMVFPNISNEISERLGLSDIWLPTSNVISDIFEACAYEISINNISDHWCSLLSKQNILDWEYSQDLSNYWLKSYGHEINYQIATPLLNDILSGFDIYINNNNNGSSSSSSSSSSNNGDNSGSNGSSGSGSSTSTSSNDNGSTNNNDNKVEPTSILRFGHAETIIPFISLLGLYKDEQKLFANSSTEQIENRKFRTSVVSPYASNIAMFLFDCGSAADGFKILVQHNELPVLVPGCDEIYCDYQQFKSIFKQGIDNFKWNSYCNINDDDSGSSGGDSGNGNGNDSHSKKSSYFLAIFIPITFLVGGTIGGIFTYFSYEKIMQVKNRKKLTQYGNDEFISSPKSKSFSFKPTKFDSRSPLIQ", "length": 635 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54NT2-1", "protein_name": "SH3 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKITTQFARTRQMLFTKTGHSEETIDVQYHYEKERTFSTEERLVKIQKNSKKLIELYKDLNKITTDIAQDACDLYDTQDPMWTPGSKLRDVATNNDKHLLDYTEQMAEPYTKPLSDYISQYKEARKRTEELTTRKVDMDRYKNEVGKLREKGAGSSSKAKLAPTEEKLRICKEGYDSLHEELLNDLPRLNEDKLIFIDYLVASLIKYQSEFHKKVSYEWSPLPSLTKHVDEYSGRDHQPVITSVERSAASINLRSDPVFKSNASIKMKPGAQDQQQYSTVDKDIHQSPNPSNLNLQKSTPNPYGGASAPPPLYGGGGSSTATALYDFTGVDSSELSFRAGDIITIHKSEGEWWEGELNGIYGFAPGSYLRMN", "length": 374 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54PW0-1", "protein_name": "Annexin I", "gene_name": "nxnB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEYKEKEINTSSPSSPSKTQISNIENDSISEKAQEPISEKVQDPISEKAQESISEKEHIESNNVSEIIDLIKSGDQHLNNNNNNNNNNNNNNNNNNNEEENQEINYNDNQLSNEEIVEDVKNSNINNNNTIEKGNSSQNNNKNNNNNYHTEKCDYCLICKCYDYGEITHNIVEDSEILKQSIRYSYVDDTSINSILAHRNYAEKEAIMKKFNDKYNKSLETELASHTHQKYRRTLISILTEPSIYDTLNIENSIKTKNSNTLLEILLTRTNEQKELIKRIYLVKYGKNIEHDIIAKFSNGANVNGNMMKQLLISMLNNDRDSNSNQSLDMNLINTDSNRLYQAGEHKKGTDHEVFIEILSKRSFSHLSELDRVYENSNPKGHSLRKAIELEFGVSKSIKQVKISLLDILLFSKEPSKYWAEQFNRALTSGSWGINEIDLTRLTITQQHQASKIKQAYISHYDNSLINEVSSKTSFRYKKIILSMLTV", "length": 487 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QB4-1", "protein_name": "Kinetochore protein Ndc80", "gene_name": "ndc80", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MHNNNLTYQQYQQQQLLIQQQQQQLLYQQQLLQQQQQQQQQQQQQKQYSHGRPSTLGLPSRKPPPMQPQPQPQIQAPIQLTFQQQQQLLQQQQYQFNNNLNTINNNNNNNITNRHSMVTPSTNLGGRSSLGPPSAMLTNNNNNNSNIRNTTFISNSGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNNNNNIHTQVQPKKSIAPSKSNTISSNTTTTTTAASSSSSSNPSITLRQETRPVNDSKFQSQCLLRLQQFLSQSEKGYPRAITKDNLMSEINGLMKFLCLHIDPHFKLPTEKPEEEIISFFKMMGYRSAGFTKRVFSQVGNAHTRGHLLGAIIWMVELIEYDQIIRQMDSHIEREILNGNTIDENGNLTTTTSATNTNEDGNFNLTTQIFSKHVFKSYEAFLKGDDGNHVDQFLEEKFNEVNELIVKECEESMERQKKIKQEIVNLTQYITNDDIDQLNFKLEQTNQEIIATHDLINDNELEDQKLDQEIDQNQTHFQELEIQQKEHQKKKQEFESRIQIQQSNSVDAKRINQETFELKEELDKVQREQSRHDQLKQEKSKEIKQSINEIEKLIQSYKEICCKASLVTNDNLIIEKYRIIFTHTLNNNNNNNNTNNSSILNISNNIINNNNNNNNNNNNNYEEGIISISDLKLVIKNLQELNLEISQNISKIKQDLLKTSNLNDIQKESISDKELELARIKQKHDKQKNILKQEKQDQTFDITQREENIEQLKSSNKKLIDDGVRELEKTIQLLESQREEHSRLKIDLKQSSEQMKLQYLKRIERFISHRQLIGSQIFDTLRQMEELSLTQKILFPPPPPPPQLSQQHQQLMQQQHQNNTIDIDE", "length": 855 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54QD2-1", "protein_name": "Probable cytochrome P450 517A1", "gene_name": "cyp517A1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIINVFLFLIILFLVKDFVKKNKKIHTKSPSGPIAFPILGNVVQIRFWELFKIQEHELFGGYSKKYNGVVRAWFGERLFFFVSNYDVVKYFQKDENFHNRPSVLVPGWRYASSNGLGVMSSSDDKWKRAKSSVSQSLRVRTTKKLMEEKAIEFIDSLEKISNNNEIFYPKGHIQGYACSMLFKYMFNQDLSVESGMSRTIGNAVEHVFGNLSKLTAFDCFEIFSPLYDWFFTRRLKGCDIVRQIISSQNENHLKSIDPSKPRDLMDDLLIEYGLNEITKEDTMQINQICFDIFGPAVGTVTITMNWVILQLCNRPELQEIAYQEIKKAVKDDEYVNLNHKQNAPYIVAFIKETMRLCSNGFGLPRTAKNDQICGDFFIPKDAIIFINYLEISQNEEIFKNAKEFNPTRYLDESLPVPNIHFGVGQRACPGRFVAIDKMFLGISNLLLKYKLKTQNGEKIDDSIQFSVSLKAKDYGIKLEKRI", "length": 483 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RM4-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKVILIYFIVIYLINISFSLKPYQQQQQLHNFNIIENNNNNNRNEKVIIAHPKIPPYWLIENEISNPNDLISFKILLKQNNLNKLNYLFEEISDPKSKIYGEFLSINEINELVKSSESDFNVVLEYLKSFNIGNIENGSEIKVFSDYILVETTIEKVSSMFNSKFSNYKNKNNGNTRNRLNGPAYLPKQLLNSIDFVTGLSEFFENNFKIENYLNNNNKNNGDSDSDSGSGSGSGSSNSYNGGLDDILITPKVLKSYYNVPNELIGKFENNSIGVIAFNDYFSMGALELFDEKFNITTTKDNLKIIGNDCLGKGCDQYESDLDIQYIRSMGENISTDFISFNDAQWILDYLHSVLLMEKPPLVQSISYGWAELLQCDVSNGCSTFGYDSKQYVDRTNSEFQKLALLGISVLVSSGDDGAPSMGGSSGNCPIDGTVYCPTGGCNHTKTMCPEFTIYNLNGGSDSGGSSDSYCFFPMGIASSGCTNILGDPSVLDSGMKIFSEKNKQCNLAIEYDRTNLPHVYSECECKDLVNVTFRNYHFTQYQFNENNGALFVAEYPSSSPFVTSVGATQFLSRDEKITTEVGCTILQGAKITTGGGFSSFQSQPKYQQYAISQFFNTSFNSLPPSFSYCPTNRGVPDISMVGHNYKIYSSDGNNKDFNQCPCKSLPVDGTSCSSPTLAGLIGLINDQLLLNGKTQLGFLNPLLYQMAIDEPRIFNDITGDSSNRCSRSYCCLYGWSTSSNTWDPVTGLGSIDFNLFLSYVLKLKGI", "length": 767 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54RX1-1", "protein_name": "Translationally-controlled tumor protein homolog 2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLYKDLIGNSHDDLLTDRYEIKVGDVTFEVKTKMITKDLNVVVNNNSLGGSISTTVDNNNSITLSTNLEDEFENVEAAGTFQINNLVEQLRLVETSFDKKSYLAYMKLYIKDLINHIKQQPSNSDNEKIEHIQKGIQSFVKTMMDGENFKKYSFFTGSSMDANGLVALMYYKDDDPTTPTFVFIKYGLLQVDV", "length": 194 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S19-1", "protein_name": "PHD zinc finger-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKNCIVCSKVGQYPLNLVKCYECKSYYHKFCLQSTKIPRGEWYCSSCEIERKNKKNKKRKLDGAGKKNKKNNKDDDDDNDDDDDEGENDEDDEDHQDEDSGEEEDEEEDEEEEDDDDEEEEEGNEKNKIKKRKRIPINQSPSIKKRTKDIDSEEEEEEEEEEEENDSEEERRIQKRKNKIKQQQQLKMKEKKQREKLRKRRRRTRSSRKDDNDQDDDDDDDDNNSNNSDDNDQDENKNKQKRKRRKDKKKDDDDDDDQEEEEEEEEEIVTGKRKRRSLNKVQPNQHLNNENEEDNEEEEEEEEEEEEEEETDSSEEFLENLVCSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSADDDEDGAINSQKEIEKQKQKQKEKEKEREREREREKEKEKERERERERREKEKKDALRSSFSNIPIPKINNINGSNGSNSNNNNNSNNNGSGVNRQSPPKVISKKSPQQSPKPLKSPTSSSSSTTSSPPPLHQQSKVTSKISPNSQQSIPTINSNINKSPPSQSKNSPPLKPLTPDLKKQIPITNITTSSTTTTATTTTTTTTTANTSNVATTTTLLKPSSQKKPTILSDKKQLNTSGTNLPMNGKKKEDLESSASHSILDMIPPNNKLFNNSIQSAPISWDLSGSQHKLSTSSSSLPNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKLQQQLQQQQQQLHQQLQQQQLQQQQQQLHQQLQQQKLKQKQIEEEQEKEREQKRLENEQKLLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEFIDQKELEDKLLSQFDNQNLKSPLSLTSTTSSTLSHLPQSTFESSTILSNKTIKQKWKSRILFETDQICQCEIIQIYGMDFKVNPFQNNITSKTLELSFNQVSFDNLPKPIRDEFITKSSTPSTCLDIGAIDLPNSALLIFLPEIPNQSSLYHLIIHFIENRVAGFIDLSNDLSLYIYPYQTSIISLDLIGILIDKKSLSPPSLILNQQQKQQKQQQQEQEQQNQSFDIKNICYIGINHISMNKILTSQGKNYFSFSNFNELTLSSDIKNFDLVVVDNKMVNNQTINKEINNLMQLQPTTNNNNNNNDINNNHDTLLLVIKDVEFSKWLVSQKKFPNSLEIQKIFQQQILFKQSRCIFLLDNSIIIENESSYFVEFISSFGKFKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNDWTIKISSTIFDELLPFGHQSNVKKKIDEIKRGINQQLIVSYDFSPMVPKQSSDFLLLALRIAHSKKYKQVFLITSNKIIQNQSKRYSNLNLNCLSLEGGIDYIKNINNKFSLKI", "length": 1361 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54S56-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDLFSHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVGECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54SW0-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "NQAKSSTIQQPTQTQQSNINNNTAKPRAAPPLKLVITNSNPSLKQKPQSQQTIPQQSVPQQSIPQQTIQQSVPQQQPNQSQQVNVNRTINPQQQQQQQQQQQQQQQQQNINRTAPLPQQSNYKPQPGVIYQQQQQTQYRVGTPLTINRSPMVGMVSKQPMSSSQQQSQSQQNIQRVPCQGKCCAGLAVKPLVPINSITAKPPPYSTMGPRGPISGGFVRTSPTGAIIGPSPQQQTMSRAMVNSMPIQPQIQIKPKPSPLNNGGIPITTTTTTTTNPLNKSSPSTLTQSSNTLASSNNNITTSNSLSSSTSSLPTTSTTPTTKPKSKPRSKSNSNSQTSSSTTSSSSTPSTPTTNSTKNKENTTPNKGDDSGTDNEKSSLSNSSKLLPTAYTMDQVLPFNPNQMFLGPEDKYIKSATRTYHKIPTNPSVMSNNRGAEIPSSLEYILDIPIIHDEPSSKNNPTWGRLILDALRRLVANKKTTRITERLKLDNMYKDMDSRSNQDKLDWKNGLVNEAQLNYLLSFLSNTIPFPDTPEKNKNKYLSSSDSQIINSNDQSNSLNSNNSSNNSTTNNNNSSTTTNSTNNIINNNNNNNTSSVPNSTNNSNNSSPEQQDVIDMELKLEPDNSMNFPIEINMDSLGSYIDDSFTFDNSSYDDTATISSDDKNLPITTVMPPTTSTTSTPQTITNTIPTTTPTIISPPTITTTTTTTKTTSPPTITTTTSPPTITTTTSPPTITTTTTTINSITPTTSTSSTINSNTTPMLDIVIDPVISLELLDENHQQQQNKEVKEENVHSKQQPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQEDFMIQVQTSDLETQTQIQQDKEEIQVKPIVDSKKSGNSPTQIQQQQQHQQQQHHHQHNTLTQGFEFGMMMDIMNSPSSTSSMKRKRDDVDQPINQINNSSMVVQQNNDFFSDFNTIEAPFSSSHHSSQLSFQTPFSPDIVIDSDFQNKKRIVS", "length": 981 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54T36-1", "protein_name": "Probable polyketide synthase 19", "gene_name": "pks19", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFGNKEIAIVGIGFRIPQGKESINNGSVSHLWNNLKNGFSGIVETSERWSDNINLLGEVNNKFGGLLPLKEWSDFDPVHFAINPSEVPLMDPQTRLLLKCTWEALEDAFIDPIDIRGSNTSCFIGCSTLDYSTTNRDFNETSENYFASNVLHTISNRLSFSYDIRGPSMTIDTACSSSLNSITMGFQSIQNGTSNLSIVGGASLLLDPYVSKSFSFLNMLSKKGKCKPFDSEADGYIRAESCGIVILKPLSDAIRDGNNIYCVINSFSSNVDGGGLNDKSNFYSPSKQSQSDNIKLALKSANMKASDISFVECHGTGTPTGDPIEVEGVSMALNSSTTSTPSKPLLIGSLKSNIGHCEAASGVASLIKCCLMFKNKHYAPNVNFDQPNPKINFKDWNIKVVTEAIPFTNINEKPVSMVINNFGVTGSNCCLILSQFIEHSISLNGNNPSYPIESQQQIFLIPFSANSVKSLKNYEDLIINDNNLSTNSFKEFVKNQIYSKSKKLYQRSVLISSNWDQLKTKNKYFKTSNDKSSNITIKRNQPLIVIVFGGQGSQWNKMAQQLYECEPIFRSSMDKFNKELSKYYGYSVLDKLRSIKDDDIISIHQPIIAQPSILMLQISLFELYKHWGINVSFIVGHSLGEIATSYCSGMVDFQTVCKLIYHRSISQNNTNGCGKMLSVNISHSEFIELYSNKYPTIEVACYNSPTSIVIAGNENILKEISLDLKENNIFCAFLGSLSSFHTSSQNSTKNEILPLEIPSRQSTIPTFSTVTTNLFNHETTPFNSSYVYENIIQPVRFSQTISNLYQHIENNKLGNELIFIEVSPHPSLSFYLKQMIPKSSSYFNSVSVLTSTNKKNSNDLDEIHSTISQIYCLGYDINFKCQFNHNDDDVNSIRNNSTIILPNYQFDEQYYWKVDINFEQYRLNGPNVFNNLGKSMINYSSNNKSYESIIDINRNPFKYLKDHIVKGKYYFPGIGYADNIMKLYPNKDIVINNLEFLAPFVLKENVKHILQTNVYQLGNTDYRVTFNIKDNKANQWVQTCTGNFQLISLKDNNNNNNNNHSSKYNINQLLSECNFTTLSKQEVYKYSKLRSGITHLGTFQGIEEFHFGNDLTIARIQINYENFDINGKPVYQTFDKSFFNIALLDNCIQAITGFITNSSQFVFERLEGLKVYSENIPTDKLKYKNIYCQAKFISLEADSYKSSVLVLLEDGTKLLEIEHISFRSTLPLIDELLLNNPTNELFTNNLQCKDSLVNILSIDNNETSSSSGSSNTVTEIIKQTIKPIINEKIVFRILQSFSDSELSKQIIEALNQIFDNSLQEIDIEFTIIDNSNDKLPTLHDSSLIFKNDITQLKPSYYDIIINNNNDETIIKPIFNILSSNGLLLLIIEDDIGIRFNINNLIGVGFNENKIQKSNKVIQSQKSTILSNELTVVPNNKNDNIIIYCEKHSKYTNEFKKLISNNHTNRKQTTISNINEFNQLLPSITNDSIIYFIKSMEQLEMNNFKQITMEYIEINQQLLKHSLTCKHVLITIDSQIKNYLSSSIIGASRYFNEFPSLNLYSIDFDNQLSISSLLNKIINQLIENSNNHIQREYIIRNNSIYYEILKNEKNIKSNFNSNSFEDNDFMTLLDSTNLEYKLASKPKKLKKNEIEVKVLATGINYKDYLIYRGLVVIDENVSISKNPLGLEFSGIITRISDENKNCEFKVGDNVFGVSHDATASHVITDVLYVSHKPNNISHIEAASLPIIFSTCLHGMFNIGNFNIDDDEVILIHSATGGIGLATLEILKWKGHKSPIFVTVGSKDKEQYLIDNYGSFITGIYSSRNKNYVNEIKSKLNQLYGTTGKFNGVDLIINTLPNEFTHSNFLCLKERGKIIDLSITHLNNNEFLNFNNFKFNKSYHNIEFMHINKRVVSRLLKSISNALNENKVKLIPITTFQIENVKEAIEYINQRKHIGKIVLDHSCSNGSIGSDGLLNQLIESDNNEKNHTILKYDFKIDTKNIIGKNIIITGQSGIILEILKWLIKYSPPTESFENIIILSKSSLKWELELLINKTISRKDNNTKFHFKIVDVGDSIEMRKSINQILLENPNIDNIDSIFHYAFTQVTKEVEEIDIESLDISHNAKTMGAINLHEISIEKSWKLKQFVMASSIASLFGSFNQCTYVSANLVLDSLSRYRKSIGLPSTCTNWGTIKSSGFVSRNDSVSKMLDDQGFIPIPTNIILGSLDLQLQNSNKYSNLIVSKFNYDSIKKFASETSTFQRLDFILNSIKEKDNDNNGGENISISESIQMKFLNKISELLSIEQSKINTDIRLGEYGADSLTSVQLKNFIDKENKSNVITLQQLQNNTIGVNIQIILEQIKKLDSNETKGKSKKIIKKDSAPSLEYWRNEMKLDESIQAIKMNPIDFRNDSKVFLTGATGFLGVHLLSNLIKSPNCSVVYCLIRNKKSEPNPINAIINNLKHHKLYHFHNEFELSKVKVIVGNLASPLLGLSKLDFGFVSNQINLIINSGADINLASNYEESKVVNIGGLIELIKLSTTGDYQKPIVGFSSISVFFESPNCKEFDEETVIPTIENINNLPGGYMKSKVVVENLFREAAKRGIPSMLIRLPIIFSHEETGIGHDSDFFQLIIQSCYAVKKYPNIDKNILTSPIGWIGLNTIKMIGNEKCWNKSSSNQLNIYSLNSEVSSIKSSFSFLEKQYGCEMVEYEQWKNIINQSKILSCIKFKTFHSLDRLNGVYNLGHGFGVSKKTKELLQSMNSYEGGMVNEKIIQNHINYIFKN", "length": 2778 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TD0-1", "protein_name": "Peptidase S8 and S53 domain-containing protein", "gene_name": "V4-7", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISKTSLLLLLLSIVALASAISVQRVPIADVTSAPAHFVQNKLAKSYELVQFKILLKQRNLDILEEKFWDVSSPKSENYGKFLSKEEIDSIVAPSPKDVKVVVNWLIDNGLSKNEMIVHSDFIQVRTNVGKASTLFETSFAHYSSSRTALKRIRVVGQASMPMHVLAKVDLVLGLSDFIEDNKMSESMRATKKQVQGSTVSITPAVIKQYYGIPTGQIGVESENFQSIAAFSDFYSSGALQFFDQKFGIDSSTVRVKNVGQNCIAQNCDQMESDLDVQYMTAIGNNITTLFLSSGNGEWIIDWATAIQQYNPIPKIASISYGWAEVEQCEITNSCSTLGIDSVVYVARSNVELQKVGLRGVSVFVSSGDDGAPSFGAASGNCPIDGTKQYCPLGGCNHKSSQCPMITIMESNGTQCFFPMGSESNTCQSMLQNQNIVNGINEFVSSNSKCQVALEQDTQQNYHIYSSCTCDKLKPYSDSDAGFKIVGYSYDQDAGTLFQPDYPASSPFITSVGATQITDVTKPEIVCSVATGAIITGGGGVAITQAQPSYQADAVATYIKSGTLPPSYSYNATNRFYPDLTLVGHAYEIAVPNTLTSNTCPCALESVDGTSCSSPTLAGMISLINDKLIGAGKPTLGFLNPLLYQAAKEQPNVFNDITTGANNCNRAYCCQYGYTATTGYDAASGLGSINFKNFEQYVLSLN", "length": 702 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54TX3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLIYAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYFKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKAHTSTLNDMCRHWGVFRVKFYQNHPKINELPDCIRNDNDEPLKLKEIYELMIKDRHPTPRRTEWQKLWAVRYNTAIPKVFININSISHQKGRNTLFRFFSRSLPGINHERDTRCKICGHLFRDPYSHLFTLCQDILDIEKTIISTVNKLSFIKIHRWSMDTLDISKYNRTERIFPNLIGIIAHQLWKIICHKLFNTDESKPEPKFEQKVIETELLNLIETEKFITLKKIKHDEAILKNTNQDLHKYKFNKAWQTPAAPNPLPI", "length": 1097 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54U20-1", "protein_name": "Peptidase S54 rhomboid domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIYGDTREFRNIHFHLNNIRIVGAIFGQDGFIHKKIPLATKVISIICSILFALSLVAPSMFGSYKTCLSIESLTNSFLDNLYRIILSNFAHLSIYHIVYNMITFLDLAKLERLTFGTLKYFYLLFLFGIITNLICLFIYFIGRNNVCHLGFSGVLFALIYIESNSSGRDVFLFNAVKIPSKLYPWAMLILAHVFVPRSSFIGHFSGIVVGILFIKGYLDIFILSNQKLSEIESSQLMNIFTTKNSYFPIIKFGGSRRSYNTDRKSLDGLFFELKNLFNPQQQQQRQQQRQQQQPQSPQPQQPQQPQQQPQQQPQQQPQQHQRDNFRNDNNDNSNNYDEYDFSK", "length": 343 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VC1-1", "protein_name": "ABC transporter C family member 15", "gene_name": "abcC15", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKKIKNIINKIINFFSTIYILCKIYLYYNIKNRYEAYNILSVYGDDDFFNKPCPEDSSNWKDKLTFKWVERIIFVGFFRAPLNLNDISDLPSSLKVENTAPLLKDIIFNDSTIPLIKHIYSKFLPRNYIATGLFVFVSVFSFITPLILKNFLSYVEKIDEQKHIYIGIIQCFLLFLSSFINMASQQYSYWFGFKTSLEVKGALETIIFEKMTKLSNLSKKNYNIGSMLNLMSVDTDFFQYFFCHYYIEIFLFPIQILSLLGFLIYVIGIAGFVGFLVMLITIPLSSFLGTQISKNLSTSMGYADTRISLTGELINGIKFLKQYAWEKMFCERIEEQRKLQLKYLYIRIIYWVLVQIVTQASSGLVLVSTFTTYTLLGYEVSLEIAFTSITILQNLRRPIESLPDCLHKFISLIASAKRIETFLQSSELQNQPFIHNQSGLNDILIRNINFNWNEHNLKLKNNKNNQNNNQNKRSIILSSGEQFEITNDFTFDGIDIQDDNYDYEKEYKINYNNNEEEENFMTDCLLKIKPLIKDRRLQQQQADYQDLLSINLPPPPSENVDFKAPKGLLTIISGGVRSGKTSLASGLLGEICKAVDKSSPDSVNSILSTIQQPFLQSTSFRENILFGKPMNMERYIKVIEACCLAPDLLAMGEGKDLTEIGERGINLSNGLKHRIQLARALYADSDCYILDEILSSVDPEIANYIFQHCIKGMMKGKTVILVTHQIQFISSADHVVVVDNGVLIQGTYLELLRMGIDFEMILKEKENRIEKQIVQLQEDEDYYEEVEILDFTMNNNNNNNNNNNNNNSNFNGNNKLKRSSISLPKGISIESIISKDFDQTTIEKAKLFVQEDRNKGDPGWIIYKKYIRMGSSISFFIFTCIIYLTSQIILLLSDYWLQSWASHDRLNVSEPTDVHYLLIYLAYIGGFVFTLGVRYLLIAKITFGSAETLHRSLLKSIIRAPLTFFEQNPVGRILNRFGKDISDIDILLLDCFSDVLYCGACLVTSIGIIIYISPYIAIPFVILIAINYIFQLFYNYSVLELKRIQSISRSPVYSLLSEVYNGLTTIRSFGQQERFFNMMKDNININLRVFFYNFAVSRWIGIRVEFLSAIVVLMSALFSIFNDNPGLSALGVTTALGITFNLNWFMRQFGELESRINSVERVQSYISIPKEKETNEDEFIQTGFIWPSRGEIEFKNVEIRYRPNSIATLRNFSMKINAQERIGIIGRSGSGKSTIGMSLFRMIECSSGSILIDGDDISQIDLKRLRSSIGIVPQDPFIFSGSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLVQGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIKLNNNQKNKLN", "length": 1436 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54VG9-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIIILSFILSIISFSNGTIVKCTSASCSSLNNNCVNHYCNPRAGCYGIDKCVRIDACHIVSCDLNNGSCINTKANCDDGDPCTDDFCHNGYGCFSLPNNKHPSVICQKNCNDNNPCTDDFCDFTNTCQHTLKNCEDNDFCTIDSCGPNGCVHTNISCDDNDPCTSDFCSIMYGCYHEQIECSIKVPCSTDIECNRYNLCETYTCDLISNICKYSTKFCNGFPCINNECMTGVIYN", "length": 237 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WA9-1", "protein_name": "Short-chain dehydrogenase/reductase family protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKKNIFFITGCSGIGFGGLMVKKLLSRGDYVAATSRNKNKLIQDIGSNENDQFLPIEMNLADESNVKEAIEKCIEKFGRIDILISNAAMGILAPLEETTDKDARTLFDINFFGPLNLIRNSLPYLRNNQFLKNNNDNNNSKLNGPRIIIIDSICGYSSLFNGCSIYCSSKFALHAISETMSIELKPFNIHCCNIAPGYFQTSFLSSCLIPDTRIAEYKDTHSFLDEIVKLNGSRFLGDLSKAVDVIIEISLSYSPPNHVLVGSDAFELFDLKYKKLTNDILINKEICSNTDKN", "length": 295 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WC3-1", "protein_name": "Cln5-like protein 2", "gene_name": "cln5lb", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNKLIFIIICLGIVDKTISSDFKSYNDGIYSFTYDNICSFKNSIRDQDVYELYYVQAPLLYATYGNLLEKINAYHSGIVLYNKNNGPNITIDYYAIPSFEATLFPKSIIKDSQGNYNITWDTHGLIEVTNYINETYWNKRQLIMYDLSGIQIKQYLSWAPIYNKTHTFYNLFNIESDLSISNSSKIYKNSSTCDDFVWASFDVLYKLGGTIASVQSDPQRDDIKLFISSGEPKIVDYNDSIKRNQIASFFNELKDFANLGKNKTALEIFNELITFFNGYFYCYIDGEYYEMKLSKQNPISFTYLPSPIPIGKRNFNEIKKLGFCK", "length": 325 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WW7-1", "protein_name": "Probable serine/threonine-protein kinase DDB_G0279405", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGCIFTKPSPEQQKFDGEDYECENKKNLNLISYIRNLLFGNNSHQQLYNEIIPTTTSTTSTTTNSVYQNIGLDGYNNNNNNNNNNNNNNNIMNNYGYDDYGYSYEEDEDYYDEMPIPTIVAQPQPQPQPQPQPQPQPQQPIRIVSQNQQIPTTPPQQISQFNITGNKSPSSIGSRHRSKPKETLRAHKKRHKDGHKMVNEYVFVRKLGKGTFGKVKLAYHHDTHHLYAIKIFNKIRLKKQTMGIGRPNAFDDVLKEIAIMKKMNHINVVKLYEVINDPQEEYIYIVMEYIEGGSIMSANETSEDLARKYFRDIVFGLEYLHEQKVIHKDLKPENLLVNSEGVVKITDFGVSHIFDDDDVVRCSRGSPAFLAPELCRNESQPISGKGVDVWALGVSLYCLIFARTPFISKTNSLLDIYDQIVNHEPTYPREISNDLMDLFKRLLDKNPLTRIQIAEIKSHKWTTISGTWPMNELDHLILSVTDQEMIDAISTDHTIKPSDNTTTDEDDSDLSSSSGGESSGIIGSSNESKSMYNNVNSKQKIQNQNQNQNQNQNQNQNQNQNQNHNQNQNQNQNQNNNNNSLIEKSNISIPASSSSISNNDSCYENRNVYIKDEEMNMICNDSVIMDPIKELNKIDGLNYGCDFQIGKEYSDFQYNSGHFIYDLVDENESQISRESANDYYLPFKTNKYLNNKSIV", "length": 695 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54WX7-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MARTDNVQLPLENTSIEFEEEIIDSQNDISQQKNYQDFLKNIPTDLNERKEYISSLKKLIKLEKRNHQQIQGEQPNQQEGLNSDRPPPNHHGDHHHSLPPPNHHGDHHHHSQPPPNHHGDHHHHSPPPPHHHGGHHHCPPPHHGGHHHCPPPPPHHHGGHHHHCPPPPHHHGGHHHHCPPPPPPHHHSHHHHCPPPPPPHHHGGHHHHTPPHPPPHHHGGHHHHCPPSPHHHGGHHHHSPPPPPPHHHGGHHHHCPPPPHDGNEYLPQSQTNIEQCICRLNRKKELLIAKIQSIDSIIYNLECLNKQNYQNNYLPSIQLQPTQQPQQPQQTSIKPQQMCQQFFIPQTPNFPQMNNSAPLMYVSQIPVQQSFNNN", "length": 374 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54Y59-1", "protein_name": "Small GTPase", "gene_name": "rsmH", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNIFLSKSKDVYRVTSHKKEVKICVLGDANVGKTNFINQFTKSSFNEEYTPTIESRQNKLYKFNRKQFQIQIYDTAGSKELNLFVSDSISQCEGFIIVFSLNDRNSILKIQHYKTLIKNIFKDVEMPIVLVGTKMDLKKEITISKNECKITSVNNNIPNLFYTSAKNKESIIPVFKKLVDLIISKEKKVKKETESNNIKINNQNKIKKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVFKTRSNSTLRMKKYLKLF", "length": 272 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YJ4-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKKVYQDEEFSFFEIGGKKIADLYVRDIITEIRKRGKEITGLGLKSKYELLCILVNRMKEENPSLNIPPKKRVLDFGSLSSTTSNGILQDSNKFFKKDNTHQHQQQQQQQQQQQQQQQQQQQQQQQQHSNNSDDDDDTHNYNDDSDESDDEYIITEEEEIELHKNLNLGDDENLLTLEIKLLESQLENKKFRKSLLLKDKKIKHLENIIQQQQQQLLEQQHQQQQQQQQQQQQQQQQQQRQEEEQQKEQQQKEEQEQEQSSLKNNLKFKDGANLFSIESISNLYNKILNEFNFKKIITEFGDSSLKIHEEFVKFIILKSINLNHNNNKNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNLPNGDVNKNNNNNGEIIELVPPPKIDEFWKLMVLDTVGYQQFSNILGAKVNYDTDINPTRKGYQRLKDMKNLYFPPPPSTTELTTDEIWPNHYLLPIQPSPQKQHIQKQQLPSSSSSSSSSSSSSSSSQQHQQHQPQHKQQHQLQQIQEQQPQQQQHQQQQHQQPLQQQIQQQQQQQQQHQPQQQHQPQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQQQKKQQQQHQQQKNKENNKENNKENNKQNNKENNKLNDNNLNIEVHEDEGNRIINFLISPDTPLRNLFVAYAKEIGENFNSFKFYFGNELLCQNETPSQLLMRNGTKIQAFYLNKKEIKK", "length": 702 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54YV1-1", "protein_name": "Rho GTPase-activating protein gacII", "gene_name": "gacII", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MVRKLFNTSHKKELILDVDTTIVKIGTPKNVVLLTKWLDANGAIKEEGVFRVNGNTTTMEQIKKNFSQGKDDLTKYTSADIHSMAGCLKFILRELPEPIFTWDFYPIFIKIQCLQDESRKLFFLKMLIHGLPYTSRTLVFQLFGFLSKFSVHQDQNKMTPKNLATVFAPNVLRPKKEEDNFQLMNNQDSIGVIETLIEEFQYISNIQKNTLNSQEIKVKSVLPFDETTNAITQQSLVEDYLIAKANTPQESSSFKKNLPFKKGDIIKLLYIKNDGNFIGEINGITGNLSQTYVDIIDISELAEAFTLTPPPIPTLPIASTILHTPPTSSSSSSSSSSSSILLTDNQPKLCSSTPRINNSPSSFSPSLSSTTPQLLVQQSPRQSPRQIPSISLIVEPNNTNQPSFGHGTLQRTSTGYFSSKPLSISQPINMSKPTNMSPPTHHAMSMHNLPPSNTTRENHLPPLPTKPPPLTIPSSSSLPTTPIKQQPQQPIQQPLTPQNHHHHHHHNNLSSSVNTANTGNCANILSPNSDRYLSSRSQSSVHLSGSSSSSSSSSSSSSSSSSSSSSTSNRKFDFSLKSKSSKNSPSKNLPPQPTTTSTLTPPPPPTITTTTTTTTTTTTTTIATTPPPPSKPLPNIPVKDQQFNTLKRSTIEIPPPTITSTNINNNNNTINPRTLNYSFSSFSITYNNSQLGGQLSQEEPPGGVKSQSSYLDNNNLPSRNTNIPNLPPRPPPLNIPQQQQQYKPLPSPPQLQSPQSSLNQSLQIPLQQQQQVQQQKLTTHYILPPQNTNLSGKNLQRSSTSMLLNKLPPPPFSFNKN", "length": 817 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA1-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNLNITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSGSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZA6-1", "protein_name": "Alpha/beta hydrolase fold-1 domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKINQTPKKHKIIEPNRKGYSIVGKNTGKPNKIYFETFGNGPKKILFITGFLSSSKGWCKQIDYFTNKKDQYEICVFDNRGIGKSNIDSKYSYNFSTKSMAMDAIDLLEDTLKWDKVHICGLSMGGMASIHLSSIIPEKVQSLVIACVPNGYFLPFFSMGVFNYIRAFFFTFNEKKKARIFQSLMYSDNYLDEKTNGSDETRSEQMFKKNSTGFKDDGPSFLTILGHQIGYITNRFSKKSLEVIKKYSIPTIVINSKKDSLVTIDITKKQIVNPLKPLNFHVIEGGHLSQLENPTFFNKLVENHVDKHSNWDHSTFFQVEKQQFQRQSFMTQNILYSKNYLSSNTLSSSFLNCNTLRSFFNKIKV", "length": 366 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q54ZT3-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551H6-1", "protein_name": "t-SNARE coiled-coil homology domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MATRDITSSYILSRTECKNRAKIINSAININIKKSGSGYKRLEEENYQDIDIDNNNNNNNINNNNINNNDNDNDTTNNIKNSNNNNDIQLNILDTEINIEQLNSLPPWILKLNDIDENIKKIISLIEKFKKYLKEDIDKILAEDIEMESRIDCERSIELLTMETIRLFHKTFDMIKYLNKSNNSSQGENKMKKNTQRMKSAKLKALLITFKHIQRSYLALLKKVSSLQRSLSSSFLYRSGEYDVNNDNEDYGENSSISNSHYLQHHHNNNHHHEDDHDHEEDHEEIMDELNEMATTLIERQRVSQLIKETSHLIQDVGSMCVKKDSIFDRIDYNLAEGEELEFNGTILICDGITNGYERPENEKRKKLLLIFAVLIIVILFIFILKYVIEI", "length": 391 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q551V5-1", "protein_name": "EGF-like domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKYLFRFFIFLFCITRINSQTGCFFRETGADYNIDSVFSVFYVDNLFNIFGMTFYMKTCTYVTCDPWRQTMICGNYNSTTFQLGPYQSQKVTLNKNGISIEYLSDKTPPNHPCPTITTTVKFICDKSVLSVPKSDYDYVGTCGVQIKLFAIDYCQTCSKCIASHGSCNSTSGWCTCDSYTMGLNCDQLKASISSVVAPTIDGGSVIISGDFSSIYSLGPSLVITIGSLVCSQVSFAASTTQISCTIGAGQGYQNLTISDGSGSTLQYKQFYYHYPCQEDCTPYGTCNDVIGKCTCNYKYSIGADCKTLNLQLTSVKPTLLDGGQAYLVGDFSNVTGLTLSVKIGIKECTDVNFNETTLQCTIGSGEGIKDIIITSDLLTYSKIGAYEYQYYTCPLGCLHGTCNKYNGLCVCNNGTYGDQCQYIECPLDCSTPNGVCDKDTGICDCDDKYSGEGCDFIKCPLDCSTPNGVCDGKTGICNCDEKHSGDSCQFLQCPLNCSNPNGICNRNTGICSCDSKYSGEGCDFIKCPTDCSTPNGTCDGKTGTCKCNNPYTGENCDEIAKCKQECSLKHGTCDSHTLDCICDTQTKGLSCEESRLLIESADPTSLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDDDLSFTGVGMFQYVGQINKISKISGGAIAGIAAGCVVGVSVLGAGGYYQYRKNKKIELFMS", "length": 722 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q554Y8-1", "protein_name": "ADP-ribosylation factor-related", "gene_name": "arrB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGMGFSFIEKKDFKRFLILGIDNSGKKKIMYRLKFNKDIPTRPEKGFFVETFERRFKYNNEDVCGQNMIRPLWPNYYTDETNGLIFVVDSSDQERIEEVRLEIKKLDENIKIFKNHPFLIFANKQDLKNSLSIEQLIDKLELNKLSLNRKWHIQSSNAITGDGLEFGLNWLFSSSHNFT", "length": 179 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555E8-1", "protein_name": "Putative fatty acid elongase DDB_G0274669", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METVQSIITEWTDPKSWEKLVQHSFKDSNWKELIDPVNYKFNFGVTPFSQFQIIPIVLVIYLVTIFSIKFLMKNRKPFSLKFISILHNAILCIWSLIMCVGVLYEIIKRVSNEGPLFTVCEDPNGGFDKGVTYYWSYIFYISKFYELLDTVIIVLKKKPLIFLHVYHHCKTVWWKKYITMIQILQFVCLGIAGVLHVYTINTIGCFTHYPAFAAAYSINFSFLFLFSKFFVKSYTPKNSNSNTNIKSKKID", "length": 251 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q555Q5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MRSIRIKKINFHIKQGEEQLKQELNNYCEETSLKYISARIKKRHNDFTINAVKDAQGRTINKQELIEEEYVKYYSNLYDYKEDDAPSHYEMLENWTVTRDSTWDNLENEFTTQEILEVIKQLNPHKSPGPDGIPNLFYITHKEKLAPILASAFNDTLRNPHLISKNYKEGLIITIPKKGDPELIKNRRPITLANCIYKIHSKLINNRIIPILTKVINHNQKGFVPGRFIIDNIISMNELINYCNDKRINGIITLYDFEKAFDSISHGSILRSLQHINIPTNIINLIMNLLTKSEARIEINGRTTIPFEIKRGVKQGDPLSPTLFVLVIEALARKILQDDRITGLPLNNSDHREKFQSFADDSASMVPDSQQLELVLQHFNSFCKATSSKLNIDKSSSILIGNPDNTNQRIPISTNPERYLGYFFTGKGITRKIPEILNTIRSSLVLWKTTDSTIKTKTNILKAFALSKLTYYSYVENFKEEELNQINKLVEWFLSAPNTKMLVDFKITPKLSPTAKKDQEVNADYANHRFHKEYFEWNYKAIDYDLTRSFAYRNLMALILHNIWIWICNQIYSEDPLTDESLSYSSLLKKWHKLATLEYIKKAKDLKNLSAKDHNNFKDPKILLTSTIKLRKTTANYYCIPESSLPNIISFDQFI", "length": 655 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556H5-1", "protein_name": "Cofilin-3", "gene_name": "cofD-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTTPKPTIAKISPECQTHFQDIKFRNKYQGILLKVNEESNMVVDKTLVAEGEFSELAQSLPTDQCRIIIYRYKSGEGSKLFFIYWGPDSAPQQDKLIYGNAKVTLAITLKGIDHKISASNLKEISEQVFIDRITPKTA", "length": 138 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556J5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWNHNLCHAINLDRQFDHINNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNNNSYDYSFSVHSSQQYSRHYPNSCNNEQTKPKDYYDHASRSQHDYHANGSNNGNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNNNNCDSNYNSNNNNSNNISIANIKYQQDQHYQHSDTYTSHQYNSFNDNNNNNNNNNNNNNNNNNINNDNDNNGYNQYDESEEDEEEQDDYDEFDIQDSASSYNDNCGVLNSNTYIYDYQSPQQPLYSNEYQNNNHQPQQTDSYNYNNTNNDNNSYNINNNNNNNSYNNNNNYNNSNNNNNIGNIDSNTNNNNYNYNYSNNGDVYNGYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNMNNMNNMNNNIITSNREQFYSNNNHNNINQYQYQSQQQQTQQQQQQTQQQQQQTQQQQQTQQQQTQQQQQYLTQYYQQELYSQSYKCRPYYQNSFVISKC", "length": 480 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556P1-1", "protein_name": "CWH43-like N-terminal domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MISSSLKPSVLLWILAILIPSTLITTYTLTVLLFHGIRRTVPYISDTIDFSPESCIGTFFISISAFLVFIVVFVKHFLLQNNINQNFNIDIILNENENEKKKNRAKMLNRISTFLGLICGVCIHGVSSFQYHNTGLVHSIFAASFFFTGFIYIFTQTYLDHKFSKLPKRILILRRVISLTTSVFIGYIILQFFIDNLAPILKIISALSIFFYLISFFYEFSKITINFQINTISQIEHQKEYNENSALLISQ", "length": 251 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556R5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFNFERIDHGSGKGTGIAIENRDTRKGHISINFKDDDGRILSIKYNSFNSINILLINAPATISERNTFIINSKSLFKKYNSINHQIIAGDFNNNHDCNSFFGTELRKIIDQDMLLDTGIEENTPTFPRSMKRLDRIYCHPTLLNQNSKLVVHNTVFNKSDHFPITITIQTNRETTTTTTTTKLERLPWTLCKEILNNKHIHDGLSELISKNKDKIKSVEEWTKFKNNVIRDYLKKEQNKIKKEKNKRKYVIHKLLGNSDIIPKMRKELNEEISRILEEERKVKAWDIKLKLHLHQETPSKYLTSILKSRAKDKSIFQIKDKDNKTISDKENIAKRFVEFYQDQYEEKEDNEETHKKLLEKWEVDVDLIKKLEIDRPIRIHEVTKAIKTSSIHKSPGLDGINALFYKYHINSIARILTIAFNDLLTNKKEIPTKFKEGVITTIFKKGDELNISNRRPITLLNTDYKILSKILNSRLLDITSKIINKFQNGFVPNRFIQDNIQIMKEVIEISNKRKNNTLITFYDFNKAFDSISHKSITRTLEHIGIPPKFTAILLNLLKDTKNKIKINDFLVNGITIRTGTKQGDPISPTIFALVLEPLLIDIINDNTIKGFTLPNSKSLKLTAFADDIATFTNSTEELMKINTKIQKYCSATSSSLNKEKTVMIAIGDKPHDLPFQESTVPERYLGLNFTKTGLNSKYNTLIQEMKNNLIKWKSQAITMKAKMTILKTYVLSKLTYHQYMDNLNEEQIEEINNMTRWFLFSSVKNTYTEERKYKTMMKIDRAYADWKEGGIKLWDIELRHIAFKIWYMNRLLHNNYNNNNNTLQEWYMEQLSRKKPTLQPSTICADTGVYSESNFTKTIQR", "length": 861 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q556X2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557C9-1", "protein_name": "Homeobox protein 5", "gene_name": "hbx5-2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "METIVNNQNNGQQNTVPTQSFSSSVYMNYDFFDSQQLQQPQHQPQHYQQQDSFVSPNLDNNNPQIHVQSNNYNQNGFVGYNNSNNNNNNNQHMNNQYSNSFHNNNSSGFMAFQNNSSNFNNQNNNNSNNNNNNNNINSYDYNNSNNNNYNNNNNTHSNNSNNNNNNNNSNYWNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNNNHHHHHHQQQSQPTSPYNNPIQHNPNDMKFNGQHNPFNGNQMVMDNNNNNNNNNNSNVFNSNSNSNVFNSNSGSFLQINNNNGSFSSYNNNNNNNNNNNSNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNQFSQSYDSTLGNNRFSSMMGQPIQQQQSPPQQQQQQSFIQSSPQAIPASNCNGNGSTSSSTSPLSPTLIGSAPGTPTSMLATTLFGFNLSSSPTSSPSSPVKKGKSQSALALSSSGGSGGSSGRKKPQKHDSMSSITNTNLKSTQASTLKESKRSNSSPNLKKQMQLQQLQQQQKLNENGTLIPPLPFASISENITNNNNNNNNNNNNNNNNNNNNNITNNPLSGSMEFPNSNNINQSSDSINGEFNIGQPESPKMYNSSPSPPPNATSTTKGGKKSKKSLHISTTQQSPSLNGSTGGSMLTPTMSGLSLSGGGSGGGFSPLISPTGTTSNKDLQSSPSPSPLLKSMSMGKLDLQDSIDSMSSPLSPNSSLSSSNGLLPPPPNSNNMNSSGGIPTPSTPTSPPPLTHHINIFSNLEFVKQLKDHLLPNDFKPEEHALERNLLRFQQFVKTLAEPLQRDVVTSMFELSVDAQLQYGSNLDNDNLSALMLFRRKILNFNLFRMMMLNDPNSFIPLPSPFPIQTTTISSNGTIVNPTNVNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTSANTVQSGTTSNSNLVFQQTSNSNTLSPSQQQQQQTQQQQSINGSSTGSLSDAQYQDLGIHLDTSSANSGCGINVSIGSSIGGGGGGSSLNGSNLNGSSSISGSISGGSSNGGGQFIMSPQFSLDGAYQQQQPSSYNINNEMELAEKDEDEIFNNNNKDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSSINSNINNVNNCNINNNSNSNNGSINSPRPSTPTTLNSSGKRSKKIYRGDSFGAGNDISTGLMASSDQIIPPPQQQQHQQLVNNNNNNMNNSENNILLADSNKGLSVSLGSLPTNTPSSMEIEQQQQQQQQQQQQQQQQHLNQQQILHQQLHHHLSSSLGGAQFTNIQQQQQQQSGNIFYNSPYNSSQVYMNPYGTSITNTSLAGPSTTSSAMQHMITNMTSSNIIVNNQNNNNNDQNNNNNNNNNNNSTTNSNVNNNNNTTNTPSSPPQPNNCTPTQTSIITSNGVVVPSLQMRGTITNPPPVLPTPDTLVLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQETPHTPTSNSISSPRSSPVHQQSPSNTNTTTTSTTTIRHSAVTQLSFAGLHNQQVSPISPRSPRSPHGTSGDYNDGSQSPSSRRKNRFTDFQIKRMNDCFENLDKNNNGKFTSEEICQIATELGLTDQQVRVFFQNKRARSRPSPRGQPTNPLTSSTNNGNNSNLALQHLQQQHLQQVQQQQQQLLQLQQQQQQQQQQLHQQSANTTPQLNSMNPNSINYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIINNNITTINE", "length": 1723 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q557D0-1", "protein_name": "RING-type domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTGSNNLNSLNNNNNNKISLQETIQDIIKCSICLNSPKNPRFCPRCSALFCLECIDRWIISNPTCPACRDTLTSDNLNSNLIVSNILNELVKSEQEEYTSSDICNYHGYERLYYCSTCQEPICSDCALFKHKDHKIEKLSINFNKNLEILKIEEEALKKRQEELIELNSFLELDAETLLKNKSQIEKEISKVVITMKARLKYDFERRYNTILESQEKINNELTHLDFIYNDLLNHYKKSPSSFVLTSQQFIGVLQSVHKNSIMDIYTPINTDLTSELIPPFENRLLKFENFTTGDCLFSSRIAFYGMTWEIKCGIEEDNCFLNLKVLECNSDGKYFYMFTIVNQKTNVNKLIEFDLPFQAGETFYIPNFSSKQTLIDEGFILPENDILLLQFSFRPQNYFCYSNDLKRYIDILEYRHRGYFGEEDEDDGTIETTVTKLPNDKSTILGSDNYNDNYNDDGIGDLDEDEEEEEDDEDDDDNLDDHLQYDNDDDEDEEEDDEEQNEEDNDEEGTNIPTSEYEDLDTSSASVISNINRRDRFKNNNINNNNQFVNSNNNNNKYNTTNSNNSIVGSSRYINNNNNNNNNNNNNNNNNNNNNNNNNNNNNYILNRSYSTNKIYNFYQDEEEEEEDDDSNIDDQDEDEEEEDSEEESSLSSSDLQDLDSSGDQSSLEFSFSKYTNNYYSNNNNNYNSGGGGGVGGAGDNNKIECIRRDFNNLLKRINFTNSQLTNLKPGVPKDGDLLNDDENDKKCNIPLNEDEEEDEDEEDDVNKNKTTSTTTTTTTATTTNEVVTINPNTISNNSQDEEEVKSDIVKLLENGIANMLNNSNSSNRSSNNLKQQQQQQQQLQKDDQKQKDEQQNKSNTGCDIDQLNILSKLSIKESCDSIKNNDNDSLGNSTNNNNNNNLNNNNNNNNNNNNNNNNNNNNNNSNNNNLQSFLQSNENTENETDFNDNNTNPETNTETENEYLTSSNMNLDGGESEFDSNKSYEGSSTDENFNSDEDYQDEDNFNQDATGSESANNDDYLDDNEREGSDSIENYDEDIEKVLTSHNIITTPSIPPSQQPQPQLQTQPQTQPQSQPQSQPQLQPQSQPQPQTQPQLQPQLQPQLQPQLQPQLQPQLQPQLQPQTQPQQQKKYDDLSENQIQTENRNKKIKEEINNKTNNDNNNELGKSSKSNTSSSSSSSSSSSSSYSESESSESDSNNEYDNEDEDDIVNQVSNFNFNFNDASNFKNFSFRPKFPSDENDNDDNDDDYEINIDLKNIQKISPILRAIENGESNINHYQSPVSLSSSSSVSSFSGSGNSVPITATTTTTTTTTTTTTTTTDDDSGINMPISPLSASPPSPPPQNEPQINNETNDNDVKLPQI", "length": 1364 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559A9-1", "protein_name": "Probable polyketide synthase 13", "gene_name": "pks13", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENFKYRNNENDVAIIGIGFRLPGCKNFTPNELWNNLKNGFNGVVELSNRWSDNFYTMGKVSSAYAGLLPFDELKSFDPLFFGINPTEVPTIDPQQRILLKCTWEAFEDAGIDPIKIRGSNTSVFIGTSTNDYQRIIREKDQTITNAFGTSLHATSNRISYCFDFRGPSMTLDTACSSSLNCVKLGYQSIRDGTSNLSIAGGVNLIIDPYFTASISDLNILSKTGSCKTFDASADGFARAEGSGIIVMKNLKQAMIDGDKIYCVIKGASSNVDGGGLQDKSNFYAPSSLSQCNNIKMALKSTNGTVEPKDISYFECHGTGTPTGDPIETRGISMVFNDESRSKENPLLIGSIKSNIGHLEAGSGIASLIKCCLMFKNKCFAPNINFKVPNPKIKFEEWNLKVVTEPIQFTKSNTCIGLSNFGVTGSNCCLILSQFNNNNNDNQIVGNNNNIKSNKEYLIPFSSNSVKSLENYQQLLIKNGENEFKFLEFIKHQIFTKPTSLYQRSVVIASSWDQFNNAKIMKTSNSKSSNISIERNNPITVFVFCGQGSQYDRMGLELYNNDFIFKESMDLLDNKLSKYYGYSVLEKLRNCDSKSIQHPMIAQPVMCMFNISLFELYKHWGIEVSFIIGHSLGEIPAAYCSGMINIDTLCYLIYHRSIAQTKTHTNGRMLSINISADEYFSQYSKQYPDIEIACFNSPTSIVIAGNEQKLNEISEILKEKGIFSAMLASLSSFHTSSQNKVKEDIVNKQFDSKQSEIPIFSTVTTNLFDSVTSPFNSSYVFNNIVSPVKFSQTISNLYKHIESNQLGNDIVFIELAPHPTLQFYLKQMIPKPTNDDNSIEFKVSVYSALNKKNNDIEEIQRTISQLYCDNGYNVNFKCQFQHDDTHGSINSNINQLSNISLPHYQWDDEKYWKEDPSISKLIVNGPQTDNLGYLNENSPNSKSYETFIDIKRPPFQYLKGHMVKGKYYFPGCGYIDNLLKIYKSQDLTINQMGFKSPLIFIEGVNQALQTNIFKKSTSNTTTNNNDEFRVEYHFNDQKTNRWILSSFGDFQLSNHSSNSDNLEKINIKQLIQNQCNLTKLSRDELYSHIKSKTGLTYNGVFQGVNKCYLGENCSLSEVSLELKREPSSFFNTAVLDTCLHGMLCLLEEQSQLVFDRIEGFKYHSSNVPTSEEEMKIHSNIYVYSTINPSRIGDSYSASIVIMMEDGTVLIEIENAVCTSLTPIKESISVKYPTNQLFSMYLQSKDSPIPSPLNFKSLYNQNQQQLKIDKQFTDWMQKCEKFISNQFFKNIEKRNPEINLEILNSKTIIELKSKYCQNLKNERLFQFVFETIKQLGVNAYDDDDDLTIDSSEDRKSIYEILIKSTKVIPKLLFPLEDEDLTIDSPQSLFENGLLDRFYNNPNLMTNQCQLIAQIIKESLKPLLNKKMVFRILEMGGGTCSLSVVVLNLINQLLLENPSFEIDIEYTWSDISPSFISAAKEKLSHIDKRINILYRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKKLSPSLDEIHKILTPNGHLLFVEIPYKELISDSIFGAFNQWWAFEDTDIRKDRCSIPPNQWIQVLSNHNYKDTIVSDNKECTWCCFVIHSQKPSLLELSKKIECNQYDNIIVFGNENSQDNFTKSIKLSYNNNIIKWVSNIVEIKKFIKLNIITNNSIIYFTKGIEELTIDNFKLINFQYIQINQLLLKYESKCKNVLVTRDCDGSNYLASSLIGAARYFDEYRQLELFTLDFDNDTIQSCDECSSSSCSNLIKLIEPLIDPKINIQREFLIRNNRVYFERAKLETNLKKSFKSESFENSNKLISTLNFNLDYQLQSKPFKQLLQNEIEVEIKATGINYRDYLVFTGSLPIEKTNHNGISNQPEFGVDFSGIVTKVGGGGGNGEFKVGDRVYGIGHNTTSSHITIDSRYASLIPNSLDYIEASSITSSYILSLYGIFDIGNLDIQDNESILIHSGTGGIGLSALNSLRWKGHKSHLFVTVSSKEKEQYLRDNYGSFITGIYSNKDKNYPKLIKEKLNQLGSNKQGVDLILSSLPNGDDNLNFKCLAKNGRIIDLSNNIDLFNISKSKIKKLLNTINDGFESGELQVIPIIEFSNSNIRDAIEFINERQHIGKIVISHDDSNLLIDLINKHSNQPNYSILKSDYQISQSNLGKNILITGQSGIVLEILKWIIKFSNSIENVIILSKSLMKWELELLIGKTMKKANNKIKFHFKSVDVSDSIQVENSINQILNDNPNIVNIDSIFHFAFTQITKKVEEIDMESLNVSHNAKTIGAINLHNQSINRNWRLNNFVMASSATSIIGSTDQCSYVCANTVLDSLSKYRKSIGLPSICTNYGAIESAGFVSKNESVAAMFNGIGIISISTDLILGTLDLQIQNQQSSTNLMLSDFNFLNFVNNNLQLSLISKFDFQTNLAKNQVNEKLQNQTQNQNLQIQSPSSTTDCQTIIKDSFLHKISEVLSIDISKLNLDLKLLDYGADSLAIVQIKNWIDMEVSPNLIVIQQLQTFTITSSIQYTINSFLKKKVQSQE", "length": 2551 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559I8-1", "protein_name": "Uncharacterized protein DDB_G0272530", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKIKLILVLIVFLTIVNVNNSIDLCLSNPKKALVNQACKYSTDCEYPLFCGSGNGYGKNATCSKNIETGGSCESNNQCTPCNVCFNAKCKVKLYLGDACDENKSYCSSSVCIKGKCSIQGDVCTANNQCKFNNYCKSGKCVPLEKEGSSCDKDSSCSLTNACVGGKCVTKYQKPLGAVCNSSNECQVFSGHVCGANGKCSVYNQLLSKCKENSDCGPNGMCMCKSETENVCVDLSVGALKNDKCPSLLSSFSSCMTRERCTENTPTGCPKCYPIFMCYQYSCFYMNQFIRSTQNYYKSFCS", "length": 301 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q559Z2-1", "protein_name": "E2F/DP family winged-helix DNA-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNISLLLNNRNRNRNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNGNANESASLNNGSEEIRSNPSSNFSSPIQSSLSSSSSSLSSNQATTPKKRSHAHKNSLKCQSPQMSPQMSPQMSPQMSPPLQYFPQHQMQHLSQYQLDHLQQQQQLIQQEQQEKQQQQQQHQHQQQQQEQQKQQQKQQQRLSPQPRSSQPRSSPPRSSPQRSPQLNQQEGHINSVQTYSGNNINDKNQNNTNNNNNNMSNNNNFHDDNNCNVNYNNIRNNSNNNNNNNTNNNNNNNNNNNNNNNNNNNNINNNNNNNNNSNNNNWNNNYCNNSFADETNKNNTYGMEYINISEENQYNNNNNNNNSNNNNNYNNYNNYNNNNNNNNNNNNSNNSNSNNNNNNNNNNNNNNNNNRNNIINSNINNSNNNNYNDNGYNNNSNINSNDSYNNNNNNNNNFNNNNFNNNNNNNNNNNNNNNNNNNNNKNNNNSNSYNNNNNNYNNNNNNFHNNNNNSAHNNNNNNYNNNNNNNYYNSNNNNNFHNNNNNNNNNGNNFNNNNNNNGNNGNMFTNVNSIDNVNRNNYNNYNGNNNYNGNNSNNNNNSNNEVSQITTTSLPVKKTKVFKAPREKKFKRGPDQDIREIKPATALLKQYFIGNSITEFNAERVGSILKINHEKLKDILDIMECASLVINNHSNNYVWLGLDNPGFLKLVFNVFHCSSNLVTKEPEFACLKCKENAYRCPTSVDLPKDTRLGSTVCQFMKLLLSKRIRTNPVNDFLTIYQVCFNFNFCSEGRCPEEDFKYLRNTAKVKRCYDVANVFNGLNILEKVGKSKIHSYQWCGDFTIQDCENGCPFGHPLLTPGTAYTTNPSPNPFNQFSNAYISSSAQSSLSNSPFIQGGFHGNNNNSNNNNINGNNINGNNNYGYNNNNNYNNYNSNNSNGFNNGNSFFQQQQPLVNSGVSMVRNNNYSYSP", "length": 964 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55A39-1", "protein_name": "Transcription initiation factor TFIID subunit", "gene_name": "taf9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSSNETLPNSEQENNSKTDTKNDNKNIGDENKIIDTDKDMKDNDTINGKENGNININSNNNNNNNIDTDKEMKETSSIEEDDNNNNKNQNNNNNNNIKEENDNLTELKNNNNKENKENKEETIKEDKEKENNKEPVKNKEETNNINNNNNKNNNSDNINNNNNNNSKETLNKISSMSKVSLTSESSEINGQVNTGVVNNNTNIDITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGKTDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPPIPNRYGVFLPPDEYCLTNPNYQANPTKPVFQPVQPLVGNTSRGNYNKKQSDKQVSIKFNSMSNNSTTTTTTTPPTIGSQNGTTIVSPPNLGSLGTTTTTTTTTITPPPPILPLSSNIKPPTLSIPSSITSPPTVTTKNTSTPIIGLGSTTVAPPKTSSSSSTIAPPVLSLPTSITSPPTVTASSTTTTTTAPTTTSPTIPSLSSPTTAATTITVKKEDVKMDDFDDFDGQMKDDITPSSTPQQPSQPTESETTTTATATTTPAVTTTTIPPTTTSTTPPTTATTSTTPPPSTTTTSTPPTTSTTPPPQIKEEK", "length": 619 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55B17-1", "protein_name": "Amine oxidase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MYKKILLIFALFILVNINFASSEFKKNETESANLKSLYASYLMKNNNNTKYNNNDNSNNTNIYNDSVTKNKSKNKNELTVGIIGGGIAGLYAGMLFIKSMIFDDLGIDYTILEANKERVGGRVYTHKFDDHKYSYTDLGAMRIPLTPLMDRIVSNQNYSLFSKLAKGGYQIPTVPFLISVNNEISYYNGIRVLKGSPVLNPSDPFNYSDSNNGGPGKGIPDEYANRTVDSLILPVFYQFINNLTVDFYNGFKQMLKYDSYSARDYLKTFHNYPNSVIEYIENLSTISGRLDQTSITELLMSVFDFSGEKFVCVEGGTGLIVKSMSQIIKKKVEMGSFVTKISKSFDKKNNEIDGLNVEVVRDSNFGGSDTEILKFKHVISTTTLPALQRIDTSDLKLPLKLKVAIRSLKYTGAIKLAINFKYRWWEDSEFMSGKPIRGGSSNTDLLLRQVVYPSYGINNGTKGVSGVLLASYSGGLESIRISSMIGKKDKERKLLNIVLRDLAEIHNVDLKKLKNLYKDHFFQSWDNDEFSSGAFALFSTSQYTELFPSTGQSHVDGRFHLSGELTSVHHAWMIGGLNSAYRSVDLILKNEGFEDLRIKLRNNWGTIEQAEYPSLDWYKYDSDINHYKLY", "length": 630 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55BT6-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKLLYIVVFLLFAIKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVHFSNDTICSNKASNFSTCVLSGVCGEFGCKYVEDNCNDGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTDNGCVQQEVDCDDDNPCSEDFCHPLFGCGSILNDTICTNGNKCVNSTCTEDGCSLPVPIVCQDGNPCSDDTCNPSTGCQFTLNNSNCNDGKKCTIDQCGLNGCTHTNITCPPKRVVDIILIGLICRNHYCDQSTGNCVPDMNSVSLLCI", "length": 370 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55C69-1", "protein_name": "Chromo domain-containing protein", "gene_name": "hcpC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGKTNKKKIEEESEEEEAGDVFEVEKILDKRVQHGRIQYNIRWKGFSADYDTWEDEANVVGCPELVREFESSRIKEKKKNRKRKNVIIDEDPTEEISSSLSSILSSPQPQPPPPLQLTNHSPASSELAITTNTFLISNCTSTSNKTKISIENEEIIKNDHARYGVPYVEGIGFENGDCVDEIVGCKPFGENNLLYFFIRWRGKEKLSWVSNESIKQKEPLQLIEFYESRLKFGYKGEEN", "length": 239 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH5-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKHEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEGYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKNNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CH7-1", "protein_name": "SsDNA-binding transcriptional regulator", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIFKITRTKRRWTKNQKKILVMKVVEKKVVVKKSKTPNTSPSSSSSSSSSSSSSSSSSSTNDKSFNLSDKRKISYSNFKGLERIDIREFFEDKSGELKPSSKGISLTREQLVVILENGDTIKDWIKESK", "length": 129 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CJ7-1", "protein_name": "diaminopimelate epimerase", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEPSIDNKPSFRINFTKMHGAGNDFVVFEKNKVERLNGDKSTVTFEEIVGFTTKIAHRKLGIGFDQLIVIDDNPIDKNAAYGMDVINCDGNIEVMCGNGVRCFSKYIVDNKVLSKNLKEQLNFDGDDDIEQIIETKSGIVKTYPLLKHHLNNKDNDVIMVKVNMGTPKVSRFINEIDRHIPKVLTNQSPIESYMYTIDIGLPYCSKLECVYVTVGGNQCVVFIDRNIELGYLDSSYGDHTKFSTIDFKEISDIIQSNVNGFDDIPNVEFVIQSPQDKLENKVISRVVERGNGETLACGTGACGVAISSILKGYCNENTEITVEMPGGKLLIQWNPNNEIFKTGPATSVFKSQILI", "length": 355 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55CV8-1", "protein_name": "Lipocalin/cytosolic fatty-acid binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MELLVGGTILGALTYAYSSLKRTIPEGAHACSPFYPEKYVGKWYEIARLDFYYERDMNNVSAEYTLNKDGTISVINSGYNYVEKKRESVNGKALFVHGSDEAMLKVSFFGPFYAGYNVIAIDPDYKYALVAGRSLDYLWILSRETSIPDHIKKQYLELAESIGYNTSKLIWTEHDNINNKKD", "length": 182 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D49-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIKIMTWNCQGCSTIKSMNQTKNTINLIKPDISILTETNLKKDQNLAQIKNHYSTGGKGKEARGKGVMAINHLEQIEIKNLEEKEGRILKFTAILNNMEINIICIYAPASYDRRKGWFSNNISLEDLEQADIVTGDFNINKYAKIKFKDGSSDKRKFTENETIEFLMMEVGLTEILPNSTTKTTFKDKLIDRTFLSTKMHQLNHSYKIIDKINKSDHNIVVMDFKIPNFTKIYKSPLWKMNSIIIKEDKTIKKIEKIIDHYQETKRKNINITEYWIKFKKKIKKQCITTEKKRILERKKTLSNLANEHTKTKNKYEKETISNEITILQEEERIDRMIKSSINYINNKEIASNLLTSILKKRDSSSQIHRIKNPSNGEIETEQKEITDCFRKYYETLFKEKECDQETHTELLSTWNPPIDKKKLTEMEDRIEEYEVKLAIEKIAEGKSPGEDGITSSFYKIHQHKLIPILTELFNFFLNNEIPTEFKNGILTSIYKGKGDVLEISNRRPITLLNVDYKIYSKIINNRILKILPNIISKYQNGFIPGRLLHNNIIALDLAMEKSDRNTIITFYDFEKAFDSISHKALIRTLNHLKFPRKITNTILSMLTNTNIRVMVNGQLSESFRAGRGTKQGDPISPTLFAIVCECLSTSIRKDNTIIGIKLNQNNSMKIGQYADDTVTLASNIDDADKMDMKVIKFCQATAAKINDNKCVCITKNPKIKTKYKTIGAKEEERYLGFFFNRKGVISKVDDTVNKLENLTKCYSSVSSTLKGRITILKSYLLSQLTFQLYINEINDIKKLENVNANMLFKGDRWAISKERSRRDYEIGGLELWNMATRSNAQKAWIYEQYLREKDDQNCPPHMEVWKSEKENSLSRIHIKCWKAWKLLHHPRERITLKLNQVKPKYENKQKLKVIYRNMMDIKYKGWNKHQPTTGQKLIQKNINHPILPFREARSITTIKGRDLAWRYLLKALPKHHGENCHSCKEEESSMHIFFECKSIKQNIDSIYQKVCKDSNNTYHGPWSEKVLGKLLTPFSSNLIGAIMESIWYRRNQIKFNDNTTIITENQIIHKIKKARDAEWDRTRKIVEKQLRQELRCTDNRESINRTASIKRRLEKFSHNWNSKLMTINIPEHFIPYCSYNTNYS", "length": 1144 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55D57-1", "protein_name": "J domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIQVKNKIKIISILITLFILTINQVVECKSSLYYSILNDYEKGIDYYKILNVTKDSTYSEIKKSFRKLSLKHHPDRNVEKSSHSLYILLNQAHSVLTTDETRKEYDELLVNGIPWHENYYGKYAYRYTGISHDLRHVLLGLIIVITIGKFVYQYNKHHSMIKRAKQTDQYKKRLAQLDGDEDEIQLVIQGADKPTISSLFIIQLFFIFPFKILKSIYTFIFINKFKFIQKTDEEKEEEYRLKMGYTKEDWEYHKKKSIERMEKLKQSGKYKKYLRSKNK", "length": 279 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E25-1", "protein_name": "DRBM domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSNKSHTSEKVQLNEFLQKKKQPIPIYHTESKGSEHNKDFKSIVVVNGKQIESDWKKSKKESEKDCAKNILEFIETLDGYPIYFTPFSKDPPQNNKKIYDEKLQAVYNSVSSGIEGLNNNSFFTKIENNNNNSSSNNNNNLDHNHSNDSSHTSTDNNDNNSNNHNNNNNNQINIDLTMENVNISQSKTITNEGTLNNDNDNNNNSIQQQQHQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQCFDKDKTNLKKKKKIPFSYNTDLIEHIDLFKRQDFPQTYPSRTTYTDTGHTQQLQKQVFLLTEKIGLMELFYKKQIRVILKSHHNLETELSALKSFVEDCSVTPIEGLELYSIPVPLNPNAKPSAGTTPVLSKSETQNEIIQPTKPPTKPPASCLIKKKIPNVNMKATNKTTTTTSTSTSNSSTTIKTTDSFKNTTNNQHPNTLKPMVSKINQQTSDFIFPLPKPIIRRNPIGNGNLEKKIEKKNSKPNTIVLGVDTQSQSKTKITPSPTTPPPETTPTTPTTTATPTTPTTPTTPTTTATPPPTTTATPPPTTTATPPPTATTPPPTTATTTPPPPPIIATTKTTATATATTIPIDLNEIQIPIRSPQDLTVNQSMISTAMMIASAAQRNPKLTMKLKRKLEESPTLMSKLQKIQFEKEEEILCSQDLHSPIMSPQSPTHQPKTLEPLSPTKKSTQKSPPPTSPSPIVTRARASSNLLPIQNLISKK", "length": 733 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E47-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKSGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55E48-1", "protein_name": "thioredoxin-dependent peroxiredoxin", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTKLKVGNIAPDFEAKNYLGQIVTLKEFKEKSQPIVLYFYPKDNSPECQKSCEFRDKYQKSIEAGAEVIGVSSDGEDSHKSFVSKYSLPFTLLTDKHSKLAKLYGVNGILLPGRKTFIIDKHGFMAVFMMVYSVQLLMSMNL", "length": 142 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55ED8-1", "protein_name": "Decapping nuclease", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKQTLNVIGLINFIKKQRSFNKSPITITKPLEITRFSYEGNQLFPAKLKKFKNPTIDSDLLVGFQGPDSIESDSQTPLSLVLNKLIETKHDVSKSNFISFRNSFRKLFESMYDSEKWNIQVQRINSTIHLGMDNPTQDFHQLKNFHLKSMYSGNYFEKISTIDNNNNPNDNKHKYCSIIQSKLFNNNFILACEIDCWKKSIQNNNNNQNNNNNENNNNDDDDENYNIDDYVELKTSRDIEDSKANYQFRSKKLIRIWFQAYIAGVSKIFLGIRNDDFFLKKCLNFNTHDLPNQAINWNKDEMLIYGNEILEFIKNNTCSGKSYTLSFNYPIISLVESDSINIINDQYLQYYLNIPKNFENNYNQNNNQNNNNNNNNENNSDDTKNNNIQNNNENNNIQNNNENNNQNNNEKNQKRNFGEEKEIKGDENEERLSKKQKKLE", "length": 440 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55EZ2-1", "protein_name": "Reverse transcriptase domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIAKTQIKCTTIYAPAKSNERHEWYKENLTEEILHSDIITGDFNVDCSVDNNLNKYIKTIFDEFEFTEIKNGITFPRNKSTIDRVFVSKKILHLNPIVTTKEIKLKSDHNMVIIELKIPEYEQQKKGERLWRQNLETLKMNSTSLKINKTIKYYNKKFEENTSKWYKLNICEQWLKLKDEIKKLSINIEIRESNKTKNKLKELAEKLETAKDSRAIFLKEEINNILKEQVRIKQANQTNTHINNKETPSKYLTRRLKVQRKTNEIPQILDPSNNCLVTKNEDILEVARRYYENLYQKRECNEDTHHELLKTFNKRIDQKILDEINQPIEEYEIRLGIEKIQEGKAPGKDGLLPTFYKNHINEILPIISKLYNHFWNTTIPKDFKQGILITIYKNKGDPNNLDNYRPITLLNVDYKIYSKIINNRILKFLNKIISPFQTGFVPRRLLHDNIITLNSTIEIIKREINTKEDMEPIITFYDFEKAFDSISHNAILRTLAHLKLPLKMVLTIMNLLNESETSVYINNSLSKSFTSKRGTKQGDPISPTIFALVVECMATTIINDRCINGVTKETIKILQFADDTATIAYNFMDHFLMNEWIKKFCQATSAKINQTKCSCITFKWNTRTLYTVIKSNERYLGFDFNNKGIKSKINTISDNIRAKLVTWNSTSSTYMGRLIMAKTYALSQLTFHTYINTTPQHNSIENNIVKFVFNTKSKNSLSLQRRQNNYINGGLNLWNLKTRELAQKAWLFERYLHQRVSNTPSSYIKLWEEELKNNNNNKTTTKQNQLQLHWQCKQAWTQLKTPQNKQTHYEHLPKLKKIYEDMMTTQSPEHNKFIPTPGQKEIMTKINSKHLPFKEIKKIINMKGRDLLWRYTLKALPKIYNMPCQQCGEDETSEHIFFNCKAHIKNTQEIFNYTLTKCGHTTHTWNVKILNHLQIALVANLIAIIFDKIWHKRNKLIHDEKEIIIHRQQVIRELIKTQRAAWDRTQAVINKTLRIKSKQRPEEQNKLDSLISLKLLQFSRQWNSPLHAIELPKHLKKYNNSLSTFYK", "length": 1047 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55F94-1", "protein_name": "Dynamin-like protein A", "gene_name": "dlpA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSVFKKKDKSDDKKKKHDEETPQGTFQPASQSTSNTNLNSLASSVNNGASVGSTNGSTPNNSNGSTPTYNHNNSAEELEKQKKEEDEKRKKSELEAAAAVVAKKKEDEEKQRKEQVELERKRRDEEIRRTNAAAANAANKELNEQVEISSLEQMGKLDPSSTIHDMFSFFPNEVYNSYEKLQYFSRDLNTAVSHPEIVFVGPRSSGKSSLIEAFIGRALNIVGGGNIVGVGGSNANGCSKRVLYLQFTNNIDFEVPKVTIKKDNTIKEFDHDIIVSIEQLNENLAKRNQLTNDYIEEPIYVSIESRTTLNLTLIDSPGLLFDQSQAESNKIESIVSSLLRPSHRLIIAVESCSQDWKSMSMGQYLKKIDPELSRSTFVFTKFHHTVRGFSSTRDINKYLSGTVPDIKGFFVTLPNHQVRASYSEANRFQEKIYQAHKRDMHALEQLQYDKRYERTIGVAPLRRYILNIVWKSYQDTIPRILKHLRSKRQTAEATLNELQKQSSSLDSTKLRSIASNYTVTFLQITEKLLSGTSEGNPSANGQTLDEEKSQQGDCGEWVDAYKEAIYIDPEEWNIPYWSSKLYGGQQLERLMAEFKAVCDNSKISEVKMDDIATASGINKLNNIPNYAWAASDLTSLISRDTFVPLIEQLCERAMYIMKRLTDIADKVIDSRRKSRCIGSSPFGGNGLNNINSGGNNGININDRLSNTDMDSLDQYPFFTHHVKNLYYDFVHRAAKGCKEKCMDEFYSSRTIYWELTEHPDSSLPSIRNDHHETKTAVCQLATKLFDSIRQRITKNVLLKLYNFFLVPMQTDLWNEIQAQITCLSNEQLEQLFEVQATREQLKQEEKKQQQILEKYSQIDEQFLKAASLFCRPLSNPTPSA", "length": 880 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55FX4-1", "protein_name": "SET domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDINSNHIKKINDFKDKGNKEFNKEKNKDKLNKRAITYFQLGIKYFNDEKHKIEINDQINKLISILYSNLSLMYLKGDEIILSLEASNKSIEFNNQNSKAFYYQSICKSYLCDYKGSMESIDKAISISKQDEKVVQQRNRLIEITNNKVKEDVYFENVLKNQKLENVAYENSIEKGRYLISKRLIKRGEEILRIAPFSFSLNGKYVSKFCGVCYQKKSIDNLLKCKDCDDFAICKECKAPNEPLSKYHPNDLCVLYKLNNEYYKMNNFEIANEDNKERGLTDERRLYINTIYNIFKNKTNNKAVVEVDNAISSSVIDVLNLSKKLLNHTNESQRAYSDSTKMKTDILELIFKSFYGANTLKKDEISNIIRIVDCNSHGYSDVISQKKKASGLYPFSCYTNHSCIPNSDYFIDKHGVMVLYASSDIQESEAITISYIYFLNRVEKRRKDLLNGHNFFCTCDQCSFQSSLTEEVCDKCNEIIPSTIGNSNLVYKEPKSLKETGFNYICPKGHTKSSLVYDIDNDQLYPTIAENYSKCKDLRNFRKINIFKEMLENRDFVKKLTPREFEVTPLAKYIANPKKSNSMLFEELINLVRGSVECGLTKSIEESNYSTYLVYDYYDLYKSLLLESKPQILKLNSIRDIIIKLLTPMVYNQNKPRIDKKLNKHLSNKINLKKNK", "length": 676 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55G93-1", "protein_name": "Tubulin-specific chaperone D", "gene_name": "tbcd", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MENSEDISLNSSEKSIESSVVNLEDQQQSQQQTQQQTCQKTFVQEAPELTILIDKLIQLKHSNKDELISNTTRIIYIIDQYLEQPTLLDIHLNDIIQPLINFIKSNYINNSNNNNTTTTTTTIMTETEIVIKKLSIKNSFRIIYVLSKVRGFKTIVKLFQHEAIDLLPVLDQLEISYHQWVNINKQRDRLNEISVSYSSGINLKNYIKPEEESEQEVVDENNNNINNNHNIDDEYNENIISWEEVYVLALWVSLLVIIPFKFSSLDSASSGTASAAGDGGDGDGDGQLKSISSRILKLGKLALSDVSKIRDSFSELLSKLLNRPDMKFEQKQFIKWCTNSIQLISNNNNNNNQNNSSNNNILLIIGIYSTLATMFKKGNRLDFLPIDMNLYEKIMEANKYLSLSGSERITKKIFLKLLQRIAIIMLPPVSASWRYQKIIKPLLLKGELIKQINNNNNNNNNENNNEEGEEEEEEIPEEIDEILEEIMKSLKDKDTIIRWTSAKAIGRIVNLLPKDMGDQVIGLVIDQMFEKNEFIDADPSAWHGGCLALAELARRGLLLPERLDVVVPLVIRALFFDIIKGTYSIGSHVRDSACYLCWALARTYHNSILSPYLLPICRNLVVVSLYDREINCRKSASAAFQEMVGRHQGLVPNGIEIVTSADFFTVGNKNNSFTSLTTFIGKFQIDYYPIVIKHLATIKIYNWDLEIRQLASKSIHLLTNINPNDIVSNYLPLIIPNTQSDLVHVKHGASLAISEILISLFENNNINLLSDNLKMMILMTIKNTKNEKLFKGKGGVLIRIGMCKIIYSICLVEFSLDKNLSEIKKPTESTSTNGNEDRAAALKLKIAMLKAKTASQINKPIITPPSSKSTTNNNNNNNNNNLNDNEIAFNIILGYLNENLNHPNEEVQKEASKAFELLFSKYISSNEKISLLLELIDSHCKTLKFDINRSARRGSSLLLGSLPFNSANLSYDLLSKVVNELILSIFQDDPKFKDIETRVNSISSLYKIGIYILNLIFKNQENEQKEEEDFKKSKNYNLFIKIWNCLGLATNDYSIDKRGDIGSWVRELSCKVLFDFIKFIITNQNSSTTTTTASTTDLSIENLINEKMITEFICKLFQLSGEKLDKIRDVACKIIHELLWIENPSSINNIPHKEELKKIIVKDQDVHFNWFRTEESLPLICKVLKFNCYLYPLLFGLFSSLGGTSKYLINDSIQSIKQYFSSFDNDEKERFEKIISFSKAILEITNNTTQRMIQPTFRSIYNLLSTHIFDFLIINNLNEQSIFETILFNCYQIIESNQDDIYLLLNSIELFSYFFIQFENNNNEYIKDYSLKALLLLLSNLKYPKVRKLASDQLKKSTRLFINNNGDDETPSLIKSLIFNTKWDDSVDLIIEPLKSLLLLLNQKHLLELLSENPTKKPIPLAPPITSIEELKDKIQNPHKQSDDNNNNNNGELINNNTENNNNNNFDDNLPEDSQDLMEI", "length": 1480 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GP8-1", "protein_name": "Rho GTPase-activating protein gacO", "gene_name": "gacO", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLPPPPVQSSPQGFQLPSLHSVQLKPVRPPPQPTQQQLASNTSPREVGTSLSPQSPSNNINPSSSSSSPSSSIRQSPSSSPNVARKVPPTPTNNNGGPPTTTTTTTTTMPPPPAFIKKLSPSSSPILPKRIVSSPPLNGNTAPPPPPIVHLPPPPPTNLPPPPTLSPSSSTTTSPSSSSLNLSGGVPLPPRILRNSDGSANNNNNSNNNSNNNINSLNLSTSGGIPPPPSFFNNNNNNNNNSGSFVNSASSNGSPSLQSQNSVGYFKPPPPPVPTRSASLDPKQMGQFIKPQQNQNNSNNINNINNNNNNIILPPPPNININNNNFVPYIPSNNNQQQSTTPPPIVSISPLKRNSIDNSVVNKRLSQDLNTMLVNRLQHGLSPPVATPFFDDKILGSASKSAELKEKRDQEERERRERERIKKEKEDSEKKEKKEKKGKEEQEKKDKKKKEEQEKKDKKKKEEEEKKSKSSSSSSSSSKKSSSDNTIVNQNIFNNTLSQIMENQRDAQSLSPSSLPYPLILKLLTESIMSLNGPYTEGIFRITGSGTEVNRLKKQINEHDFSLDTQDPHVLAGLLKLWLRELVHPIIPSELYNDAIKSRSKEEVSRIISLIPDQNKEVLNFLIPFLKNVSQPHYAQYSKMDIDNVAMVFSPGLLRSTVLTTDLLLNSQYEKDFVKCLIEMSP", "length": 684 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q55GR8-1", "protein_name": "Thiamin pyrophosphokinase thiamin-binding domain-containing protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEKQEEEVQQQQQQQQQQQQPDKNNKETITWDVAEYGGYLFDKKLKAHNPLNHQMPLQYHHSQSTPHIPSSLSTSSTTSIKKPSSSLSDDESGGSSSSTPHSSNTPRKQFSFDDHCALILANQKLPKKLVDYFWDKCSVRICADGGANRLYSLGTKINQSSRWIPDYIKGDLDSLHEGVSDFFSKKGSSIVLDSSQDTSDLQKCFELIIDLEKGSGIKYRKIFILGGLGGSFSHEFANVNTLFDHPGRKIILASKDNLAWLLSSTYNHNIICRSETKCSLIPLSSKASQVTTSGLKWNLVKQSLNFGELISTSNVSLDNKVCVETSNPLIFIVDINP", "length": 337 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q561S0-1", "protein_name": "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial", "gene_name": "Ndufa10", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK", "length": 355 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q568T5-1", "protein_name": "Chondrolectin", "gene_name": "chodl", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MRATLRILCALTFLVSCSRGARVVSGQTVCQGNPEHPCYKIAYFKDVSSRVAFWEALQACEMDGGSLLSIENTAEQKHIEHLLRELSVSSSTGPASITDGDFWIGLTREEGDNAQEPGAFASCPNLYRWTDGSVSLFRNWYADEPSCGGEACVVMYHQPTALAGPGGPYLYQWNDDRCNMKHNFICKYEPESHLVKVQSDRPGGHDVDLSTEDKEDRRTPPTDEDESPRLIIAGPSSMLLIYVIIPTIPLLLLILVASGTCCFQMLSKSKPRTKTSVNQSTLWISKTPKIDSGMEV", "length": 296 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5HYN5-1", "protein_name": "Cancer/testis antigen family 45 member A1", "gene_name": "CT45A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGSAMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI", "length": 189 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5I0J8-1", "protein_name": "PHD finger protein 11-like", "gene_name": "Phf11l", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQEEPGGSNSVLNGDANSDKKMEKWTCALCPEGHDWSVIYFEPSSNIAAHENCLLYSSGLVECGPHDPRNPARSFAVKSVKKEIWRGRRLKCSFCNNKGATVGCDLQSCPKNYHLHCAKEDRAILQVDEDYGTYKLFCQRHAPGGQEPTQVDAAVKASFLKKCLEAGLLTELFEQIQQKMISIHGRFMDDTASESDYEGIKILLFDCGLFKDTLIKFEEAIKSKACECEERLNQMKQQLELLADLQQNLRSFQECGVLDPSGSTSGSLLPPEDHQCRCQESPEVQAGSGDSL", "length": 293 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSKDLAIGVIFILQCSMGILRHFILLSYYLMLHYNKHSLKPIDLILMNMFIANFLIIFPKSMLQTVEAFGIKLLFSVFVCKFLLYIERVGRSVSIATVCLLSVFQAITISPRNSCLYGLKVKVPKYISLSIFLCWALYFVVNMILPVYAYIKWSSNNMTYKRTLKYCFSVGHDEFTGSFFTILFVFPEVFLAILIVWSGSSMVVILYRHKQQVQHIYCNYASTRTSPESRATKSIVVLVSVFICFYSISSILYGCIALFCDNSWSLINIANIISLCFPVLGSFVVSHNPDFPRFSLSWIRNTRRV", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3E9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vom1r15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVNDRMESKDLAVGVIFILQCSMGILRHFTLLSYYLMLHYNKHTLKPIDLILMNMFIANFLLIFSKSVLQTVEIFGMELFFNVFVCKFLLYIERVGRSVSVATVCLLSVFQAITISPRNSCLNGLKVKVPKYINLSIFFCWPLYFVINMILPVYGCIKWNSNNMTYKRSVKYCFSIGHDELTSSIFTILFVFPEVFLAILIVLSGSSMVVTLYRHKQQVQHIYCNYACTRTSPESRATKSIVVLVSVFICFYSVSSILYGCIALFCDDSWWLINIAHIISLCFPIFGSFLVSHNPALSRFSLSWIKNTRRV", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5J3F0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "LOC100911184", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDFWNLAIRIIFLSQIIIGILGNVSLLFYYLVLYYREFTLKSTELILMHLMVANIIIIFSAGVPQTMTIWGMKQFLNDFGCKLLLYIHAVGRSVSICTTCLLSVFQAMTIRPQKFCGNDHKVTMERYLGCFISFLWVLYFLVNFIFLVYTYIKKNSNNETRKRDFGYCSTVGSDKISDSLYATLVMCPEVFFSVLIAWSSGSMIVILYRHKQKVKYIYSTHVSRRDYPESRATQNILAQMFTFLAFYTLSSTLRGSIALLSNHSWWLMNINHFTSLCFPSFGPFVLMSHYSIVSRFILFWLRKNCSNFLL", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5JQC4-1", "protein_name": "Cancer/testis antigen 47A", "gene_name": "CT47A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSATGDRHPTQGDQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGLAAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVVARRYPASGIHFVLLDMVHSLLHRLSHNDHILIENRQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADLAEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDAAGEEEKEQEKEKDAENKVKNSKGT", "length": 288 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q5QNN9-1", "protein_name": "Trace amine associated receptor 12e", "gene_name": "taar12e", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MMSLNETQTENILLCYPLLSNSCPKLHRLAVVQVGLYVFLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGLLVMPYSMVRSVEGCWYLGDVVCKVHSSLDMTFCISSLLHLGLISVDRYWAICDPLRYRLRVTNITVTVFIVFIWLFSFVYSFYVVFSGVNTVGLETFIMQVYCVGSCVLYFNKQWGLICPILVFFLPGAIMSSLYMKIFHVARKHAKVMSERVTGGLKSQSSAQRERKAAKILAIVMGVFLFCWLPFFTVNALDPFFNFFTPADIFDAVIWFAYLNSTCNPLIYGFFYPCFQKAFKILIFTYICGVRNLDTFA", "length": 337 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5QNP0-1", "protein_name": "Trace amine associated receptor 12g", "gene_name": "taar12g", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MTSNESENIQLCYPLLSNSCPKLHRLAVVQVGLYICLLLMILTTVFGNLLIIISISHFKHLQSPTHLIVRSLAACDCLLGSLVMPNSMVRSVEGCWYLGDVVCKVHSSLDMTLCISSLLHLGLISVDRYLAICDPLRYRIRVTNTTVTVFTVFIWLFSVVYSFYVKFSGITAVGLEMLILQTYCVGRCVVFFNKQWGLICPVLAFFLPGAIMSSLYMKIFHVARKQAKVISERVTGGLKSQSSAQRERKAAKTLAIVMGVFLFCWMPFFTLTALDPFFNFLSSADVFDALFWFAYLNSACNPLIYGFFYPCFQKAFKILIFTYICGVKKANTLTFE", "length": 336 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5R1F6-1", "protein_name": "T cell receptor alpha variable 5N-4", "gene_name": "Trav5d-4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTYAPTLFMFLWLQLDGMSQGEQVEQLPSILRVQEGSSASINCTYENSASNYFPWYKQEPGENPKLIIDIRSNMERKQTQGLIVLLDKKAKRFSLHITDTQPGDSAMYFCAAS", "length": 114 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5RKI7-1", "protein_name": "Solute carrier family 7 member 13", "gene_name": "Slc7a13", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAMDIEKKIYLKRQLGYFWGTNFLIINIIGAGIFVSPKGVLQYSSMNVGVSLCVWVFCAVLSMTSTLCAAEIGITFPYTVAHYYFLKRCFGPFVAFLRLWTSLFTGPGVLASQALLLAEYGIQPFYPSCSAPAVPKKCLALAMLWIVGILNSRGVKELSWLQTVSMVLKMGILSFISLSGLFLLVTGRKENVRRLQNAFDAEFPEVSRLIEAIFQGYFAFSGGGSFTYVAGELKEPSKTIPRCIFTALPLVTVVYLLANLSYLTVLSPQELLSSDAVALTWTDRVIPQLTWSVPFAISASLFSNLVTSVFETSRTSYIASRNGQLPLLCSTLNVHSSPFIAVLLDVSMGSIAIVLTNLIELINYLFFVFSIWTVLSVIGILKLRYQEPNLHRPYKVFSPFLFITAAISLSMVLIPLIKSPKMQYIYVFLFFLGGLLFYVPLIHFKLKLIWFQKLTCYLQLLFNICIPDVSDEHVAEEES", "length": 479 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q5XHX8-1", "protein_name": "Sperm microtubule associated protein 2", "gene_name": "Spmap2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV", "length": 378 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q63550-1", "protein_name": "BPI fold containing family A, member 2F", "gene_name": "Bpifa2f", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MFQLGSLVVLCGLLIGTSGSLFDIFQNPELDVESVWSEINYRIRYALETMDLDMLADYLSKRGIELKIKDLRILNLNHEVSPNGDEVTLKMPMALNASLSLPARDLTTDVSISMEAITSFAIEKDPKTGRRVLNMQRCSLNTDNTSISLLNRKSNFVNLALDSALYLIKRGLTLPVRRQLCPVLQLIISNTFHPDEISNPQTAIST", "length": 206 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q64583-1", "protein_name": "Cytochrome P450 2B15", "gene_name": "Cyp2b15", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MELGVLLLLTFTVGFLLLLASQNRPKTHGHLPPGPRPLPFLGNLLQMNRRGLLRSFMQLQEKYGDVFTVHLGPRPVVILCGTDTIREALVDQAEAFSGRGTVAVLHPVVQGYGVIFANGERWKILRRFSLVTMRNFGMGKRSVEERIKEEAQCLVEELKKYKGALLNPTSIFQSIAANIICSIVFGERFDYKDHQFLRLLDLIYQTFSLMGSLSSQVFELFSGFLKYFPGVHKQISKNLQEILNYIDHSVEKHRATLDPNTPRDFINTYLLRMEKEKSNHHTEFHHQNLVISVLSLFFTGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLKKSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASPVAPEDIDLSPINSGISKIPSPYQIHFLSRCVG", "length": 495 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q66X01-1", "protein_name": "NACHT, LRR and PYD domains-containing protein 9C", "gene_name": "Nlrp9c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVDSSSYGLLQYFQKLSDEEFQRFKELLQKEQEKFKLKPLSWTKIKNTSKEDLVTQLYTHYPRQVWDMVLNLFLQVNRKDLSTMAQIERRDKQNKYKEFMKNLFQYIWTSETNTYMPDRSYNTIIDRQYKALLDIFDSESDPATAVVLGTRGKGKTVFLRKAMLDWASGVLLQNRFQYVFFFSVFSLNNTTELSLAELISSKLPECSETLDDILSNPKRILFVLDGFDYLKFDLELRTNLCNDWRKRLPTQNVLSSLLQKIMLPECSLLLELGESSCSKIIPLLQNPREIIMSGLSEQSIYFYCVSFFKIQLGVEVFKDLKKNEPLFTLCSNPSMLWMICSSLMWGHYSREEVISSSESTSAIHTIFIMSAFKSIFGLGSSKYKRFKLKTLCTLAVEGMWKQVYVFDSEDLRRNKISESDKTVWLKMKFLQIQGNNIMFYHSTLQWYFATLFYFLKQDKDTYHPVIGSLPQLLGEIYAHKQNQWTHAQTFFFGIATKHVITLLKPCFGNISFKTIRQEIIRYLKSLSQPECNEKLVHPKKLFFCLIENQEERFVSQVMNLFEEITVDISDSDDLGAAEYSLLRASKLKNLHLHIQKKVFSEIHDPEYGSLENFKLDQKFSAINWTMLSILFCNLHVLDLGSCHFNKKVIEVLCNSLSPTPNMPLTVFKLQRLLCSFMTNFGDGSLFCTFLQIPQLKYLNLYGTDLSNDVVEMLCSALKCSTCRVEELLLGKCDISSEACGIMATFLINSKVKHLSLVENPLKNKGVMFLCKMLKDPSCVLESLMLSYCCLTFIACGHLYEALLSNKHLSLLDLGSNFLEDIGVNLLCEALKYPNCTLKELWLPGCYLTSECCEEISAVLTCNKNLKTLKLGNNNIQDTGVKRLCEALCHPKCKVQCLGLDMCELSNDCCEDLALALITCNTLKSLNLDWNALHHSGLVMLCEALNHKKCKLNMLGLDKSSFSEESQTFLQAVEKKNNNLNVLHFPWVEDELKKRGVRLVWNSKN", "length": 1004 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q675C0-1", "protein_name": "Taste receptor type 2 member 102", "gene_name": "Tas2r102", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEPVIYSFATLLIHVEFIFGNLSNGFIVLSNFWDWVIKRKLSTIDKILLTLAISRITLIWEIYTWFTSVYGPSSFAIGMKLQILYFTWILSSHFSLWFATALSIFYLLRIANCSWKIFLYLKWRLKQVIVGMLLASLVFLPGILTQRTLEERPYRYGGNTSEDSMETDFARFTELILFNLTIFSVIPFSLASISFLLLIFSLWKHLRKMQLSSRGHGDPSTKAHTNALRIMVSFLLLYSIYFLSLLLSWIAQKHHSKLVDIIGIITGLMYPSAHSFILILGNSKLMQTSLWILSHLRCRLKGENILNPSGNQVTSCYIFCIANKSVS", "length": 327 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q68FP3-1", "protein_name": "C-C motif chemokine 6", "gene_name": "Ccl6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRHSKTAISFFILVAVLGSQAGLIQDTVKEDRPFNPTIIHQGFQDSSDCCFSYASQIPCSRFIYYFPTSGGCTKPGIIFVTRKRKRVCANPSDQRVQTCISTLKLGPRSGNSAIA", "length": 115 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6EKJ0-1", "protein_name": "General transcription factor II-I repeat domain-containing protein 2B", "gene_name": "GTF2IRD2B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT", "length": 949 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6NXT2-1", "protein_name": "Histone H3.3C", "gene_name": "H3-5", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 135 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6P3W6-1", "protein_name": "NBPF family member NBPF10", "gene_name": "NBPF10", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVVSAGPWSSEKAEMNILEINETLRPQLAEKKQQFRSLKEKCFLTQLAGFLANRQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILPVPGPTSSATNVSMVVSAGPLSSEKAEMNILEINEKLRPQLAEKKQQFRNLKEKCFLTQLSGFLANQQKKYKYEECKDLIKFMLRNERQFKEEKLAEQLKQAEELRQYKVLVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGSYDSNQPHRKTKITFEEDKVDSTLIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQESWDEGYSTLSIPPEMLASYQSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPEVLQDSQDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAIDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAFDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEENHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLEEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQRVGFAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDEEEEEDQDPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGYLELTDSCQPYRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYSTPSGCLELCDSCQPYRSAFYVLEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLDEKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDKIEKKGKGKKRRGRRSKKERRRGRKEGEEDQNPPCPRLNGVLMEVEEREVLQDSLDRCYSTPSMYFELPDSFQHYRSVFYSFEEQHISFALYVDNRFFTLTVTSLHLVFQMGVIFPQ", "length": 3795 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q6UGQ3-1", "protein_name": "Secretoglobin family 2B member 2", "gene_name": "Scgb2b2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLALLVTGELGFQRTEACIPFFGVYLGILSGNRIGLHTELAPFDPTVEEKEAFEKIQDCYEEEGLKAKTEDMKLMTTILFSSECRSYYTKEVLKNILVKFSKKLTHGS", "length": 114 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6YCH2-1", "protein_name": "TD and POZ domain-containing protein 4", "gene_name": "Tdpoz4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSGELEAKSRGDTQSHEQKLCYRWTISNFSFFVEETEEYITSLVFSLEDNDKMTWCLRVYPTGVDEKNKDYVSLYLILLSCEKGSVWAKFEVCILNAKGEKCNTERIPSFSRIQPHQPFGFEKFITRDSFLSPAQVLTPDDKFTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLENDVGELWENPLFTDCSLLVAGHEFRAHKAILAARSPVFRAMFEHEMEERLTNCVEIHDLDPQVFKEMMGFIYTGKVPHLHSHSMACDLLAAADRYGLEDLMVMCEDALCRSLSVENAAHTLIVADLHSTEHLKTQALDFIIVYASEVSKTSGWMSMVESHPRLVAEAFHSLASAQRVFWALPFKQLKWSLRPTQL", "length": 370 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZMA2-1", "protein_name": "Olfactory receptor", "gene_name": "Or1o1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNCTQSPGFILLGLSSDPEKWQLFFSIFLALYLLGFLGNLLLLLAIGADVHLHTPMYFFLSQLSLVDLCFITTTAPKMLEALWTGDGSISFSGCLTQMCLFGVFADMDNLLLAVMAIDRYAAICQPLLYPLLMTPCRCGVLACGSWGIAHCASLVYTLLLSQLSFHSNQEIPHFFCDSRPLLWLSCSDTHLNEFLMMVLSALLGISALLCIVSSYGCIFCAVARVPSAKGRRKALATCSSHLSVVLLFYSTVFATYLKPPSTSHSSGEVVAAVMYTLITPTLNPFIYSLRNKDVKNSLKKLLNMEKPLD", "length": 309 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q70YC5-1", "protein_name": "Protein ZNF365", "gene_name": "ZNF365", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKDTDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLDGTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQEVQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQRVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKAKDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII", "length": 407 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q71LE2-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A", "tax_id": 9823, "organism": "Sus scrofa", "sequence": { "sequence": "MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA", "length": 136 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Pig", "common_name": "Pig" }, { "uniprot_canonical_ac": "Q7KR10-1", "protein_name": "Probable cytochrome P450 12d1 distal, mitochondrial", "gene_name": "Cyp12d1-d", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNKFKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNTKDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGKLRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTDEISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDIQPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINSNSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAKLREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQNDVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKMQVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPFKTMFLMEPAITFPFKFTDIEQ", "length": 521 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q7M715-1", "protein_name": "Taste receptor type 2 member 117", "gene_name": "Tas2r117", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKHFWKILSVISQSTLSVILIVELVIGIIGNGFMVLVHCMDWVKKKKMSLVNQILTALSISRIFQLCLLFISLVINFSYTDLTTSSRMIQVMYNAWILANHFSIWIATCLTVLYFLKIANFSNSFFLYLKWRVEKVVSVTLLVSLLLLILNILLTNLETDMWTNEYQRNISCSFSSHYYAKCHRQVLRLHIIFLSVPVVLSLSTFLLLIFSLWTHHKRMQQHVQGGRDARTTAHFKALQTVIAFFLLYSIFILSVLIQIWKYELLKKNLFVVFCEVVYIAFPTFHSYILIVGDMKLRQACLPLCIIAAEIQTTLCRNFRSLKYFRLCCIF", "length": 330 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7M719-1", "protein_name": "Taste receptor type 2", "gene_name": "Tas2r115", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCAVLRSILTIIFILEFFIGNLGNGFIALVQCMDLRKRRTFPSADHFLTALAISRLALIWVLFLDSFLFIQSPLLMTRNTLRLIQTAWNISNHFSIWFATSLSIFYLFKIAIFSNYLFFYLKRRVKRVVLVILLLSMILLFFNIFLEIKHIDVWIYGTKRNITNGLSSNSFSEFSRLILIPSLMFTLVPFGVSLIAFLLLIFSLMKHVRKMQYYTKGCKDVRTMAHTTALQTVVAFLLLYTTFFLSLVVEVSTLEMDESLMLLFAKVTIMIFPSIHSCIFILKHNKLRQDLLSVLKWLQYWCKREKTLDS", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7RTZ2-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 17-like protein 1", "gene_name": "USP17L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ", "length": 530 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q7TMR7-1", "protein_name": "Monocarboxylate transporter 7", "gene_name": "Slc16a6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQKNSKLCSRANVYTQVPDGGWGWVVAASFFFIEVFTYGVIKSFGVFFNDLMDSFDESNSKISWIISICVFIMTFTAPLSTILTNRFGHRLVVMGGGLLISVGMIAASFSQRVYQMYISIGIVSGLGYCFSFLPTVTILSQYFDKRRSMVTAVASTGECFAMFAFAPAITALKEHIGWRYSLLFVGLLQLNVMVCGALLRPIIIKGPGSPKAIPLEPRREVQYMLENEKTRTSIDSIDSGVELTTSPKNVPSEAKREQEVRVEQQQTLVVGPKHSQKRAPLLDFSILKDRSFICYTLFGLFATLGFFAPSLYIIPLGISLGIHPDRAAFLLSTMAIAEVFGRIGMGLVLNREPIRKIYIELICVILLTVSLFAFTFATEFWGLMLCSVFFGSMVGTIGGTHIPLLAEDDVVGIEKMSSAAGVYVFIQSISGLAGPPLAGLLVDQSKIYSRAFYSCAAGMALAAVCLALVRPCKKGLCQNPHSGENQTDGHRGKALQDIPEDFLEMDLGKCEPRAHMKMDPV", "length": 522 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TN50-1", "protein_name": "Mas-related G protein-coupled receptor member B8", "gene_name": "Mrgprb8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDSSIPDPEADLIQLNGSYHTETSPCVIESRVMILLSIIIAFFGLAGNAMVLWLLAFRMRRNVFSVYILNLAGANFLFLCTHTAFSLEKIIVLFHSVHIHIPLLFYTLSTLAYLAGVSMVTAISAEYWLSGIWPYWYQGQRLKHTTTVICTGLWGLALLLSLLEGKSCGFLGSTYNQDVCWKLDFIIVAWLLVLFAVLSRSIQVLLVRIFCGSQRTPVTKLHVTIVLTALVLVICGFPFGIIFYLLYWTTEVYYIMPCNSFHETILLLSYINSCANPIICLLVGSIRHCRFQCGTLRLLLHRAMQDIPEEEGEELEEVVGERVQNSIP", "length": 328 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q7TPX8-1", "protein_name": "Oogenesin-2", "gene_name": "Oog2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNFYSPPTLMELARQCLLRDEYLAISALKDLPNMMFPVMFKEAFIDGHTKILTAMIPVWPFPYLSVGTMLKNLNLDTLKAVLEEIDILISKPVFSSRCKLREITLSHDLVVVWAGSHEVEGLPEFMEQEKPVENSPGYGTKNKLKVTTELQFMEGHLDECSTYLLQWAYQREDSIHLHCRKLKIYGLTKAAVIEMFKIVHAEYIEDLELSCLCLEYLDFLNPYLKQMSNLLSLTLDEIIYTLNIDDYRNLNEEKVITVISHLPTFHHLQELYVHGVIFIECLRCLKKPLEVLSFTDCDLSQSDLDYLPYCLNIFELRSLHLTDVRLSNLLLEPLGFLLERVRHTLKSLQLMSCEMGETHFNALLPALSQCYQLTVVNFYGNELSLLFLKKLLHHTAKLSQLADELYPAPQECYDNRDVVLSHRLENFCSELLDILRAIREPKKVTFGTIKCSKCGGSYVYDLETQCCFFEKNPPWA", "length": 476 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TQY5-1", "protein_name": "Olfactory receptor", "gene_name": "Or4k38", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEDSNRTVSSEFIFQGLCSSRQLEIFLLLPFSILYLMAVVGNLFVVILIIIDHHLHSPMYFLLANLSFIDFCLSSVTTPKLTIDLLKENKTISFVGYMRQIVCVHFFAGGEMVLLVTMAYDRYVAICRPLHYSSIMDRQKCIWLVVISWIVGFVHAISQMLLILDLPFCGPRVIDSFFCDIPLVMKLACMNTDTLEILINADSGILATTCFILLLISYTYILLTVQHRSKDGSSKALSTCTSHIIVVLLFFGPIIFIYLWPVSITWVDKFLAVFYSVITPLLNPAIYTLRNKDIKNAIKKLISHK", "length": 305 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TR72-1", "protein_name": "Olfactory receptor", "gene_name": "Or8k25", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEKYNLTIVTEFILVGITNHHEFQVPLFGLYLIIYLTSLVDNLGMIILTIVDSRLQTPMYFFLRHLATTDLGYSTAVGPKMLRNFLVDQNIISFYACAIQSSFFGMFIVCEFFILSAMSYDRYVAICKPLLYTVIMSQKACWILVTIPYLYSIIVSLLVNIKIFTLSFCGYNVISHFYCDALPLLTLACSNTHEIEAIILIFSAFNLLSSLLIVIGSYLLILMAILRINSAEGKWKAFSTCGSHLTVVIVFYGTLIFMYLQPTFTHSIDTGKVISIFYTQVIPMLNPLTYSLRNKDVKDVLKKPMEKVHNLFS", "length": 313 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q7TSF0-1", "protein_name": "Desmoglein-1-gamma", "gene_name": "Dsg1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDWHSFRIAALLLTSLVVLEVNSEFQIQVRDHNAKNGTIKWHSIRRQKREWIKFAAACREGEDNSKRNPIAKIHSDCAANQPVTYRISGVGIDQPPYGIFIINQKTGEINITSIVDREVTPFFIIYCRALNAQGQDLENPLELRVRVMDINDNPPVFSMTTFLGQIEENSNANTLVMKLNATDADEPNNLNSMIAFKIIRQEPSDSPMFTINRKTGEIRTMNNFLDREQYSQYSLVVRGSDRDGGADGMSAESECSITILDVNDNIPYLEQSSYDITIEENTLHSQLLQIRVIDLDEEFSDNWKAIIFFISGNEGNWFEIEMNERTNVGTLKVVKPLDYEAVKNLQLCIGVRNVAEFHQSIISQYRLTVTLITVTVLNVVKGCVFQPGSKTFIVDSRMEANHTVGEFLATDCETGQATNKFKNVRYRYVMGNNPENLLVVDSGIITLRNRVTMEQYERLNKRYEGTVLSIHDSLQRTCTGTIIMVLCGFWTTTEHPTTSTEKPVTLSITPNVDNVHFGPAGIGLLIMGFLVLGLVPFLLISCDCGGAPGGGAGFEPVPECSDGAIHTWAVEGPQPGGITTICVPQMPPGNANVIEYIDNSGVYTNEYCGREMQDLGGGERTTGFELMDGVKTSAAPEICQEYSGTLRRNSMRECRDGGLNMNFMESYFCQKAYAYADEDEGRPSNDCLLIYDIEGVGSPAGSVGCCSFIEDLDESFLDTLGPKFKKLADISLGKEIDSYPDPDPSWPPQSTEPICPQHMEQLASGHPSISPHFGKTTVISENAYPSGPGVQHPMLIPDPLGYGNITVRESYTTSGTLKPSVHFHDNQQASNVVVTERVVGPISGADLHGMLEIPALRDGTNVIVTERVIAPGSSLPNSLTIPNPRETSNVVVTERVIQPTSGMIGNLSIPP", "length": 911 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q803M0-1", "protein_name": "Protein phosphatase 1 regulatory subunit 3B", "gene_name": "ppp1r3b", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MPIELAMSLYLSSDEFLNPRASKYSRPLQPCLNQCKSSKLSFSSLKEQSEFNGVSRALMIPGRAKKHVSFADHKGLALTVVKIFSEFDDPIDIPDNIDNFFTSSLTVSEGKDKLTLDFDQPSADYLKFRQRIENDHVCLEHCMLKEKSIMGTVKVKNISFEKSVKLRITFNTWKNHTDVECQYVKDTYTGSNRDTFSFEASLPEQVPSHERIEFAICYEVNGDTLWDNNQGKNYRIIQSALRKSSNESNGGHQQYSQSDWDIHFDRYGSPRCSRGIFPHWPSYVGYEDIGPYY", "length": 293 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q80SW5-1", "protein_name": "Embryonic testis differentiation protein", "gene_name": "Etd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDEKNPEAVPRPPEQNTELVPPKKSKSKKPANILIYLIDRHLGRPRNDMDLFEWVWTLK", "length": 59 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VJ6-1", "protein_name": "Zinc finger and SCAN domain containing protein 4C", "gene_name": "Zscan4c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASQQAPAKDLQTNNLEFTPTDSSGVQWAEDISNSPSAQLNFSPSNNGCWATQELQSLWKMFNSWLQPEKQTKEQMISQLVLEQFLLTGHCKDKYALTEKWKASGSDMRRFMESLTDECLKPPVMVHVSMQGQEALFSENMPLKEVIKLLKQQQSATRPTPDNEQMPVDTTQDRLLATGQENSENECNNSCNATEANVGESCSGNEMDSLLIIQKEQHPEHEEGNVVCQFPHGARRASQGTPSHHVDFPSAPTTADVPMEEQPKDLSRENISEDKNNCYNTSRNAATQVYSGDNIPRNKSDSLFINKRIYHPEPEVGDIPYGVPQDSTRASQGTSTCLQESLGECFSENDPREVPGLQSRQEQPISDPVLLGKNHEANLPCESHQKRFCRDAKLYKCEECSRMFKHARSLSSHQRTHLNKKSELLCVTCQKMFKRVSDRRTHEIIHMPEKPFKCSTCEKSFSHKTNLKSHEMIHTGEMPYVCSLCSRRFRQSSTYHRHLRNYHRSD", "length": 506 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q80VT8-1", "protein_name": "S100 calcium-binding protein, ventral prostate", "gene_name": "S100vp", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAQNLTSTEQEIMELLMILQEFSVKKIDKLDVQEVKRLFREELPNFLKAMDEATKNKILNDKGKEMPFDEIWDMIGRMALEYRKKNSNALKD", "length": 92 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q80XZ1-1", "protein_name": "Polypyrimidine tract-binding protein", "gene_name": "Smptb", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSRNSPPAAEGNGSKRFKGDSWGTRDPSRLVHILRLPSCVTEGEILCLALPFGEVSNLLFLRAKNQAFVEMSTEESANTMINYYTWMPPVLRGQPVHIQFAHYRELKVSSSPSQEISLSQAGDSREATASSLVAVPGQAAASGQTAVPSQLGAQPCLPPEDSYQAGTVALAPPASAVDTELVVAWQSPVLRILVENYFYRVTLEVLHQIFSRFGTVLKIITCTKNNRFQALLQYAHVMSAERAKLFLDGQNIYDACCTLRISFSGLTNLMVKYNNDKSRDYMRPDLPSDDSQPSPVQVQNMASALPAPAMSSASPYASIALPHTFAIPQAAGLANPEVFKTLHPQAIQEVAMASSSSSSSTAAAAVGAAEIAAAAVPGAEGSMVTSGSPGVGSPVLLVANLNQEKVTPRSLFILFGAYGDVHRVKILFNRKENALVQMADGSQAELALRHLNGHKLYGKALCILLSKHQSVKLPREGKEDQGLTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNLPSLVSEEELKNLFSSNGYAVKAFRFFPKNHKMALIRMGSTEEAIQALVDLHGHLLGQNHHMRVSFSRMTI", "length": 588 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q810J1-1", "protein_name": "Pregnancy-specific glycoprotein 22", "gene_name": "Psg22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVSSELLSNGWTSWQRVLLTASLLTCWLLPITAGVTIESVPPKLVEGENVLLRVDNLPENLRVFVWYRGVTDMSLGIALYSLDYSTSVTGPKHSGRETLYRNGSLWIQNVTREDTGYYTLQTISKNGKVVSNTSIFLQVNSSLFICGRPSPPALLTIESVPASVAEGGSVLLLVHSLPDNLQSLLWYKGLTVFNKVEIARHRTVKNSSEMGPAYSGREIVYSNGSLLLQNVTWEDTGFYTLQIVNRYWKMELAHIYLQVDTSLSSCCDDFNSVQLRINPVPPHAAEGERVLLQVHNLPEDVQTFLWYKGVYSTQSFKITEYSIVTESLINGYAHSGREILFINGSLLLQDVTEKDSGFYTLVTIDSNVKVETAHVQVNVNKLVTQPVMRVTDSTVRIQGSVVFTCFSDNTGVSIRWLFNNQNLQLTERMTLSPSKCQLRIHTVRKEDAGEYQCEAFNPVSSKTSLPVRLTVMNE", "length": 475 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q863C3-1", "protein_name": "Gastrin-releasing peptide", "gene_name": "GRP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MRGREVPLVLLALVLCLAPRGWAAPVTAGRGGALAKMYTRGNHWAVGHLMGKKSVAESPQLHEEESLKEQLREYAQWEEATRNLLSLLQAKGARGHQMPPWEPLSIHQPAWDSEDVSNFKDTGPQHEGRNPQLN", "length": 134 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q869X2-1", "protein_name": "Probable polyketide synthase 17", "gene_name": "pks17", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MTFNNIKDENNDDIAIIGMGFRFPGGGNNPYQFWNQLSNKMDGISKIPTEKWSRSFYEQKYINNEYGGVLKDEEWKNFDPLFFGISPKEAPIIDPQQRLLMTTLWEAFEDANIKPSTFRGSDTAVFIGMMNTDYQRCQFRDISYVNPYITPGTAGSFISNRLSFSFDLRGPSMTLDTACSSSLNAVYLGCQAIANGDSKMAIVGGVNGIFDPCFSMTFSGLNMLGHKGQCRSFDAGADGYIRSEGGGVCILKKYSDAIKDGDRIYCVIKGGSSNVDGYNAKTNIIQPSMKAQGENIEIALKKSGVNPSDIYYIEAHGTGTPVGDPIEIEAISRIFKDNHTPDAPLYIGSVKSNIGHLESAAGIASLIKVALSLKNRSLVPNIHFEKPNPLIKFEDWNIRVVTDEIQFPINKLINMGINCFGLSGSNCHMILSEAPINYDELLKTTNNNSTSSSSNDDKKEYLIPFSANCNISLDKYIEKLISNQSIYKDTILFKDFVKHQTISKSNLIKRKVITASDWDDFLNKRNETTSTSSLTSTISAPASSTPVIYVFTGQGPQWRDMGKALYETESVFKDAIDHCDKLLANYFGYSILQKLLSLESEDSPEIHHPILAQPSIFLIQVGLVALYKSFGISPSIVVGHSFGEIPSALFSDVISLETAVKIVYYRGLAQNLTMGTGRLLSIGIGADAYLEKCALLYPEIEIACYNDPNSIVITGSEQDLLGAKSTLSAEGVFCAFLGTPCSFHSSKQEMIKEKIFKDLSDLPESNVPCVPFFSTITGSQLSHKGFYNVQYIYDNLRMPVEFTKAISNIFNFIEENESYKNAIFLEIGPHPTLGFYIPKCKPSNSTITSKPIIVSPLHKKKEELTQFKLAISTLYCNGVEIDFASGQQLLPTSSSSGGGDISSFKESTNKLPRYQWDFEEYWDEPNQSKMVKRGPSNNLLGHDQFAGNTLMELFIDIDKSAHQYLKGHKIKGKYLFPGSGYIDNILRQFNGQDITIFNLEFSNPFFLKDGVQHHLQTSITPTTKGEFKVEFFIKDNRNSTKWTKTSNGRIGLFKHNPKNNKLDIEKLKSQCSFTTLTKSEVYNKLLLLSLPYGPTFQRVESCSIGDGCSFFKLSMSPCSEFDKDFLNPSIIDCAFHGLLVLSEGPQEIVFDRLQDMKFYSSNVPSTRPQFIYAFAKFDKIEGNSTHGSLNIILEDGTLLISIKNVKCTSLIRLKKQSIKYPSQNVYSHHWQSKDSPLTLIENQLIEEKSSESKINFEKLLNDKLFNYYLIRLLNQSIKSEFIEFDYKTSTVDTLDIGSKNAKLLEKIQSILNPIDSLDQSIDITSLKQAIIVKSSFKNEIKLVEKSIKRIVSLLKGGESEHFSPSNPSSPNDTPRNNSNNCSSKNNAASSDDADDDTNNEETINQLNNEPFNFSNSQFISNQNQLISKTIVNSFDRLINSIEIGEKKLIKIIDLSSIYQNYQLSKLLLLQLNQLLINLSNNNNIEIEYTIPSNTKNIDSITEETKSISNVLNIKYRSFDLQDDLESNGYLNSNYDLIITSLLLVSTNSIDSNEVLSKLYKLLLPKGQLILMEPPKGVLSFNLLFANDFKQSLEIKSEQEIKSLIIYCGFTKIETNLNTKDDEEQQQPPPPSILIVQAEKRDIESMSLTFSSDPKSLNSSYSNCIFIVSKEQKENPTSYIQEYFDITEFFCQNATIIEADDSELLTKTIESGVGKNDIIFFLVSLEELTIENYKQVTMQYTLVNQILLRNNLSTRFALLTYDSQNGGKNYLGSSLIGTFRYFLEFRSLNIFSIDVDKDSIDNLTLFLRLVDLSTIGDRETIVRNNKIFVQKIFKEPKLLSPSNNYEKNTNNLFLYSNSNLDFSFQSKEKLLHGCVEIKVMSTGINYKDSLFYRGLLPQEVFSKGDIYSPPFGLECAGYITRVAPSGVTRFKVGDQVVGFASHSLSSHVTTHQNKIVLKPENISFNEAAAVCVVYATSYYSIFHIGAFIADKESILVHSATGGVGLASLNLLKWKRNQLKKHGNSEISNDASIYATVGSKEKIDYLQEKYGDLITAIYNSRDTEYCDEIKQQSAQGGVDLILNTLSGDYLSSNFRSLSQVGRIMDLSVTQLVENDSLDFSNFKYHVGYNTIDLDRATKYNSKIIRDILTEVFDAISDGSLENIPVKVFPAIQVKTAIEYINERVHIGKIVVDFENFEQDILKPALQEKENPIQLNKVKKLEHTCDTLNNTILITGQTGIAVHILKWIISGSVLNSNKSQQQVTDFIILSRSSLKWELENLINQTKHKYGDRFRFHYKSVNIADLNSTRTAIDQVYSSCKNVSPIKSVLHFATVYEYILPENITQTVIDNTHNPKAVGAINLHNLSIEKDWKLENFILFSSIGAIIGGSKQCAYSSANLVLDSLSNYRKSIGLASTSINWGGLDAGGVAATDKSVASFLEGQGILLVSLSKILGCLDSVFQPSNSHLSNFMLSSFNIDNLLSSAPQMKRKMDHHLTNYKTSSASSDDSLGDSGSTQAKVISTISELLSIHPSKLNLDTRLKDYGIDSLLTVQLKNWIDKEFTKNLFTHLQLSSSSINSIIQRISSKSTSTSTPNPTNTSKQTATKKT", "length": 2604 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q869Z5-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSHLTPKPNVLNVYGAGTPNFVKVQILLEEKNIPHVYHKIDFSKNEQFDPEFLKFSPNNKIPAIVDNTVEPNGISVFESAAILMYLSEKHQFTDLYADFKTDPALHAKHLEFLFFQMSGVGPMTGQLGWFLRQPEPKNTQAIERYSEEVKRLYRVLDKILSTNTWVAGEQYSIADISLLGWALYFLKGYYDDHITREQFPNVYRWLDLAAKRPAIIKVLETIQPKQK", "length": 227 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AE3-1", "protein_name": "Probable polyketide synthase 9/36", "gene_name": "pks9", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MGNLKNINLKEKGVAIVGIGFRIPSGNNENSISSPDDLFNNLKNGFDGVSSTSERWSDNFHKLGEISSPNAGLLPFKEWKSFDPLFFGINPSEAPLIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHTNKHQDSVLKNAIAQSTSAISNRISYCFDFNGPSLSIDTACSSSLNAVSQGYHSILNGTSNMSIVGGVNLILDVDIIKAYSILSMLSKTHGKCKTFDESGDGFTRGECVGVVVLKNLQDAVKDGNRIYCVINGSSSNVDGNGNMDKVNFYSPSKQSQFNNINSAFKSTNDKLSINDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVASLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNKRNNEKPVSMMINNFGVTGSNCCLLISEFKNNNNFKENINLESQSVNDRVLIPFSANSSNSLNQYQSKFKNIINNQFNFIDFTANQIYSKSNFLYQRSVVIASNSNELFENISNKKQIQTKNSIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGFSVWEKVKTIKDDDLTSIHDPIFAQPALCMISVSLFELYYHWGVNPSFILGHSLGEISASYCSGMIDLDTFCYTVYQRSIAQSKTNGCGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTTMLGSLSSFHTSSQQCTKDSILQLNIESNQPKVPIFSTVTTNLFNESNRFNSQYVYDNIIKPVKFTQTISNIYKHIESNQLNNEIVFIEIAPHPTLLFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQSINLPLYQWDEELYFTQAQTLEQHRKEGPPIDHLGTSNSYNSPFNNSYRTSIDIKNKPFLYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQYLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHGNDIPPKYNIKEIIENKCNLSKLTKNELYTHIKSKTGLNYTGVFQGVTECYIGGDCTLSVVSLESQTNSFLNIPILDTCLHGMIGLSNDQCQIVFDKAIGFKYYSSNIPANLKDYKDSVYVYSHLKSKSVDSFFGSIIVMLSDGSVLYEIEEVVCKSLIPIKDSLKIEYPNDELYKVHLQSKDSPIPTPSSFKSIIYENDFFHSALNIPEDLFKYISTLFYKDIIKRCPEININKINSHSVNEIISSFSKISKHERLFRFVFETIKENGILNSLEENDDAYFEFNEVIIKSSRIISKLLFPLESDNDNEDLPQSLFQNGLMDKIYKCRYLRKKNQMISHVIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIIALLQENPNYQVEIEYTWSDISPAFIADAKNKINKIINDAAITNGFNVIYRPLKIDESLIETQSINPSYYDFVIMSNVLHVVKNIKQAVEQMYQLLTPNGQLLFLEPPYKSVLNDSIVGSFEQWWSFTDTDIRKDRCSMSQQSWCQLLKTCNFKDIAMSKECIFVGIVIHAQKPPISLLNSQPKRDNIIIYGGGNPIFVENIKLYSNSKSLIQIETIQEFNQLLSQSTITNDSIIYFIKTLETLSLDNFKQITLEYIEINRKLLQINSLCKHVLIVSDSRKTNYLASSVVGAARYFDEFQQLKLNTLDFDYDSTQNYINSNNKDMVQFINILTDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFENQNNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINYKDYLNFSGSNSNGDDNTGLPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSHIVTNYKKIQIKPSNLSHNEASSIPIDYLTSFMSLFNIGSLNIEDNESILIHLGSDGFGLSTFEILKWKGFNSNLFVTVNSYETKRYLQDNYGDFITGIYSNTDKSYVTEINKKLIKLGSKKKGVDLILNTLPSDFMDSNFKLLAKYGRIIDLTSNHLNQSEFLKNINFKYNHGYHNFELSLIQKNKIHKCLYEISNAFENGELKTIPIKEFTNLNIKDAIKYITNNKIEKITVSHDHEIYSDIIYRSLDEKEFSILKSNYQINSNNLGKNILVTGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINETKLSNNNIKFHFKSVDIGDSEQVDNAINEILNENQQITNIDSIYHFAFQQITCKVQEINMKHLDISHGAKSMGAINLHNQSIKRNWKLINFVMASSAISLIGSTDLCTYVCANALLDSFSKYRESLGLPSTCICLGAIESTGFVSKNESVSVFLDGGGFHPTPINQVLGLLDLQIQNAGKFTNSMLSNFKPSKFKNNQQTSLFLKFDYLMNLKNNSEETKIENTGNKNIDELFIEKVSELFSMDESKINKNLRLIDYGADSLIIVQLKNWIDKEIGINLITIQQLQNNTISTSMKMILNSLMKNNQNIDDNNKDLPSNRIDYWKNEMKFEESIKPISNEIQSRNNSEKIILLTGTTGFLGGFLLFNMVRLDSCKLIYCLIRNKSKSNNPLDEIINNLKYHQLYEKLNQSQISKIIPIIGDLSMNKLGLSNDDYETISKNVNLIINPGADINQKSSYQDCKLVNVNGVKEIIKLSLSSLKQRIPIVNFSSFSVFFNQSLDKNFDESVLPSIDNIDNLPTEYMKSKVVGEYILLEASKKYNIPSILIRPPSIFLNPETGIGHISDFSLLSIQSCYELGYYPNQFENDFILINTITWLSNNITNIIMNDNCWTDSKMNIYNVHGKQIQSSLIIKPLEKHFNCKHINTNDWIDMVNNSNKKSCIKLKSFHSLDIILKSENNRYKPNENQSISLSTKSLLESMGSYNTDLEITDKMIISHINQIFNLNETI", "length": 2931 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86AF8-1", "protein_name": "Uncharacterized protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MFSKFSIKENKPKKVKSNSSKGFNNNEINSTNNNNNNNNNNNNNNNDSDNFINNNDSNNNNNFNNNNNNNSNNINNKTEDSNDISLLINQFIGSSPAPSTCSGSDKFSIKPKKIVTPSKRKNSTSGSDIIDFNNCNNNNNSKSNSDSNNNKYNNSNSNNNSCNNTNNGNERKMKGYDYGNNNSNNNYSSSSRDYNSNNNSSPRDYNNNNNNNNNNNNNNNNNSNNNSPRDYNNSRDYNNNNTNNNSSPRDSNSNNNRNSSSRDFSNNNSSPRDYNNSRNSNNSFLNNNNNNNNNSNNSNDNSPRDYNYSSSNSSPRDYNNNNDTFSKKRNNVGNSILEIKSNPTSPRIKPIMVWPRSSPRIVNKLPPVQSLVDLTEIEMIDDNNNNNNNNNNNNNNNNNNNNNNNSNNNNNKSGSNNNFSDSDSDKDNYNNNNNTNNNSFNSDSDNYNNSNNNNSNSNSNSNSNSNSNSNNNNNNNNNSNNNNNNNNNNNSNNSNKSNNNFSNIKILEKRRKSINEISDNLTTRNIEEIDSKMAHEFEHPFLEKLIFAGQRPPFVECDDYFLKRYKNQFQYYLDISMKSIINTRDIGEGDDDDEINSVPFKCTLCSYEYDEENNNENTNGFIDEADKIYNRSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSNNNNNNNFYDKKYFKNNYFQHLLSKHLNQIKAKGIQDTNVYNDEANIPLGSKKCDHLECSEIILKNEFTKHIKKLHHHHKDEDIDICPRCKILKKSIQKRIVKFSKKKQEKDDDNNSKPVSNKVATISHNPSPNNIDKDINNNNNNKNNKNNTNNLENDNNDNSSNNNYLENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNNNDNNDNNDNENNNDNNNDNENSNNNNNNS", "length": 901 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86BK9-1", "protein_name": "Mediator of RNA polymerase II transcription subunit 22", "gene_name": "Dmel\\CG32971", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSDSKDEALLKSFKTQLKDNVLSMLLNFEELLKLVSPRTPGQITNDTEQELNAFEMQVRAGNFVRAGEALIKLVHDVKEYQIIYDYSNIEEEMDRQSEAMHAKVTEYDQTLIKMVKDLEEELSELEYEYYEKSGGPDLDSKDLLV", "length": 145 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q86IJ5-1", "protein_name": "Uncharacterized protein DDB_G0272718", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MPPHGHHHHHHGHHGHHEHITITPVYAPPQVVQPIYAPPPVVQPVYVQPPVVYPQATIVLETGHHHGHHHHHGHHGHHDHHHHGHHGHH", "length": 89 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86IV6-1", "protein_name": "DNA replication ATP-dependent helicase/nuclease DNA2", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNFFEKKNNNNNNSSNNNNNNNNNKNNNNKNLDKNNSSDRNNNNNGDKNNLKPTQKSLIDLWFQVDDEDEEYELSSLSNDGGSSFNSFKVNNRDTSIGSDIYSKTITPSSLALSTSSLISSTLTPPTQSPPFSKKNEKTSSFLNSPSSQKSKSNNSNVKEKLSPQYSSSSQLSDFFKKKKRPLLDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTISSLNTNSNNNSSGSSNGSSSSSSGGGNKSSNNKKQKVSQSTSSTSLKEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKINTPSPKLILKNTFSSTPTQKSPSLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKSKLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFNIPSPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTSPVKSPSQLFEFTFDDPLSPKLISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNTFISKNNLINLFNEQSNQENVSTTTTTTTTTTTSTSTNNNNNNRYERVLIINVFYEVTQIFNNSNDKIHKKTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDILITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINTFKQEIIGKSTFQLGLSSLGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQDEKQSKQSKQSKKKKQQTTSPNNNNNNNNNNNNNNNNNNNNNNNNNNGPTTCYLNVPFEIKTGKPYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGLLHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPILPEMLRDYHSCTKCYSIDPCVLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNNSCIGELILISEEYSEITETFSYRFRVNPDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEPPSLLSDYTTPNCNNNDPSYFGNYRNKPLIYIEYEDADQQQQQQQQQQQQQQQQQQQQQQQSQKQQKQKQPNFTQLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKLRSLIVDLEAPIFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIHILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFGNITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVLVGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYNNRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNSTESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIENNNNNNNNNNNSNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKEIGELIKDWKRMNVAFTRAKKKLIFVGSKSSLSKFPFFLDFFEFLDSKNWIYNLNNKIQF", "length": 1838 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86JI5-1", "protein_name": "Probable polyketide synthase 5", "gene_name": "pks5", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDMKLNDIENENFINQMKGVAIVGIGFRIPSGNSENSISSPDDLFNNLKNGFDGVSSTSERWSDNYHKLGEISSPNAGLLPLNEWKSFDPLFFGINPSDAHHIDPQQRLLLKCTWEALEDASIDPISIRGTNTSVFIGSSTIDYLHANKHPDLILKNAIGFSPSTLSNRISYCFDIHGPSLSIDTACSSSMNAVTQGYHSILNGTSNMSIVGGVNFVIDVETIKGFSYLNMLSKTHGKCKAFDESGDGFTRGECAGVVVLKKLDDAIRDGNRIYCIINGISSNIDGNGIADKANFYSPSKQSQFNNINLAFKSTNGKISVNDIQYIEAHGTGTKTGDPIETEAISMAFKNRDKSTPILIGSIKSNIGHCEAGSGVVSLIKCCLMFKYQCFLPNIHFKNPNPLIKFNEWNLKVVTSPIPFNRNNEKSVSMMINNFGVTGSNCCLLISEFKKQDYESYENNIGSINKNILVPFSANSPKSLDQYQSKIKNIINNQFNFIDFANNQIYSKSNYLYQRSVVIANNSNDLVNKILNKKHIQTKNPIISNMSFKGKNPITIFVFSGQGSQYPKMALELYNNEVIFKKSIDLIDSKLSKYYGYSVLEKLRSIGDDDTTSIHDPTIAQPAMCMFSVSLFELYKHWGVNPSFILGHSLGEIPTSYCSGMIDLDTFCYTVYQRSIAQTKTHGNGRMLSINISDEEFKSMYSQKYPQIEIACYNSPQSIVVAGNESILNEISKELKEKEIFTAMLGSLSSFHTSSQQCTKDSILQLNIESKKSKVPTFSTVTTNLFNESDPFNSQYVYDNIINPVKFTQTISNIYKHIESNQLDNDIVFIEIAPHPTLSFYIKQMVPSSLNESVSVYSALHKKKNDVEEFQQTISNLYCQNGYNINFKCQFNNKKSNQKINLPLYQWDDELYFAQTQVLEQHRKEGPPIDHLGLSNSYYSPFKNSYRTFIDIKNKPFQYLKGHMVKGKYYFPGCGYIDNIIQLYKNQDIFISFIEFKTPLILIEGINQCLQTNIQQTGKSEYRAQFHFKDQKSNEWIQSSNANFQLLDHTIEMPPKYNIEEIIKNKCTLARLTKNEIYTHIKSKTGLNYTAMFQGATECYIGVDCTLSVVSIESQTNSFLNIPILDSVFHGNISLINDQCQIVFDKVHGLKYYSSNIPNDYKDKSVYVYAKLKSKTSDSYSASFTVLLSDGTVVYEIDEAFSKSLIPIKELLKIEYPNDELFSINLQPKDSPIPAPSTFKSLIYENDRFNAEPPMVENLFQYISTIFYKNIINRCPEINIDIIKSLSIDEIISNFSKISKHERLFKYVFETIKENGILNSLEEKDDTYFVFNEVLIKSSRVISKLLFPLENDNDNEDTPQLLFQNGLMDKVYKCRYLKNKNQMIAHIIKHSIKEIINNNIIIRILEFGGGTASLSVEVIEEIVTLLQENPNYQVEIEYTWSDISPAFIVDTKNKINKIIKGAGITNGLNVIYHPLTIDESLVELQSIKPSYYDFVIMSNVLHVVKDIKQAVEQMYQLLIPNGQLLFVEPPYKSIICDSLFGSFEQWWAFTDTDIRKDHCCLSQDGWYKLLKWSNFESIEMSTESKFMGSVIQAQKPSFTSLINQQPKYDNIIIFGNNCPNFIDNIKPFSNFNEFIQIETIQEFDQLINKSTITNDSIIYFIKSINQLSLDNYKQATLEYIEINQKLLQINSLCKHVLIVNDSRKTNYLASSIVGAARYFDEFQQLKLHTLDFDYDSTQNYLISKNNKMVQFINNLIDSKTNVHKEMIIINNKVYYEIVQKEKNLKLKYNSESFEQQDNLMCSLSPNLEYQLQSKQIKLRDNQVEVKTIATGINNKDYLVYSGLEGSVNSNTPQFGYEFSGIITRVGNNVKDYKVGDNVFGLSNSCTSSNIIVNHERIQIKPSNISHIEAASIPIDYLTSFMSLFNVGCLNIEDNESILIHLGSDSFGLSTFEILKWKGFKSNLFVTVNSDEIKQYLLNNYGDLITAIYSNTDKGYVSQIKNKLIEQGSNDNGVDLILNTLPSDFMDSNFQLLAINGRIIDLSNDHLNQSEYMKNVNFTLNRGYHNFDLMSQRNSRINRSLLTISKAIENGELKLIPIKEFSNSDINDAIEFIIEENRIDKIVVSHDHEVYQELYAKFSNENDFSILKSNYQINSNNLGKNILITGQSGIILEILKWIIKYSNINTIENVIILSRSSLKWELELLINQTKLSNNNIKFHFKSVDVGDSEQVDNAINEILNENQEIINIHSIFHFAFTQIACKVQEINMKHLDISHGAKTMGAINLHNQSIKRNWKLINFVISSSIASLVGSTDQCSYVCANALLDSFSKYRVSLGLPSTSINLGAIESTGFVSKNESISVFLDGSGIIPTPINQVLGLLDLQIQNPGKFTNSMVAKFNPLNFSNNEQINLLLKMDYIFNLHSNGYTKVKESAGSKNVDELFIKKISDLFSIDESKINKDIRLIDYGADSLVIVQLKNWVDQEIGFNLITIQQLQNNTINVSIKIILNFLKKINK", "length": 2512 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KS1-1", "protein_name": "DNA cross-link repair 1 protein", "gene_name": "dclre1", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSDDEDDINLYITRSKNNENKKTNKNRLIDNNIQKTKTTTAVLTTRTTTTTTTTTASTQLKWDYGDEDDDDYSAPKDIDEEQSSKQFNYQNNQIVVKQDHDDYSAPKDMDEEQSSRQFNYQNDQTLVKQDDDHDDYNEPKDIDSQSLIDEDCDFEFDNSDFFFDDGTTNNNDNNNKNNKNNNNNNNNNNNNNNYNNNNNKNYKRKYYQSYNNSNNINNNNNNNNDKFEKRLSDLKKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQYVFPPQPEIIKQVASIVRKENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLSTCLDINKFTTNELITPFRAVTMSMLSYHNMLSLLDSSNNKYKRVIGFRPTGWTQAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDSPIKVKNILAHFSDLYEKKKQLTIASFFSAQPVTNFFQSFFKSKSEPIIDEDNKKLIPITTTTTTNINTLTATDTTTTKIKTSNTLIKDEFTDDLIWDCSDDLISDRKLLTQSDNSSALCKIEKEENFNDLSENNNNSNNNNNNNNNNNNNNNNNNNNNNNNNKLIIENDIKEEIIDFDDPVFISQQKWIEKQIYNNNNNSNNNNFTTPTKTNGNLSNNAKLNLTPTQTQTQTPTQNNKKQKTTNVSPTSYNSNNSSQQSGLKRSKSDPNVKKNQLQTSQPPSQSLITSFFQKCASPTSLFSATPPTPSITTTSNQSTKNKNSTTTTSTSTSNNKPFKN", "length": 920 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q86KX6-1", "protein_name": "TNF receptor-associated factor family protein DDB_G0272348", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEFELEDITIEQSSFTNNNSNNNNNNNNNSNSNNNNNNNNNNINNNNNHNNNNKNNSNNKNEINNQLDIPISNLVVDKENISKKYFCTICSDLLVNSFHADKFKAVQCKNGHYTTCLNCWEKHLEKKKNCIQCGVDVESIESLSSNLLVTQKFTTFKIHCPNSFFDTIDFIKDEVNGCKEIIQINELEEHLKECQYGFISCKNCEEFSKLPFQEFTQCPDFRKNTKEQHDLICPYVKISCEYCGDIINKINKESHNANWCQEITIKCLDCHLPFKKKEINQHQKSFCPETIIQCRYSKGGCNAMIRRSKLSQHLTEGDNHHQFISNILNQQDLKINELELKNTEFCLLLNGQNKKITELEILFKELNDSILIQKQQQKQQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQSQQQQQSQQSQQNNNSNSHFINNNNNNINNVQMSDSPNGGSLPQAVYKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDDKSIIVNYYIHLVNNQISDEVYEKRGCQKYDSENGSAGYGSSQFIKRADLLNDANGFLINDSITIEIEIFATEEILPLQS", "length": 595 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BI41-1", "protein_name": "Syncytin-B", "gene_name": "Synb", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGFWVLCFVLFPSSLSYPESWMPLVNLTHHILRDTNSSLFSNCWVCLSTQTQRSLAVPAPLSIWTDTPMKLHLTYSVRPFSGSFSISDIERRLRLFRPLTASYSFHNPDRRAIAFLQLVSSTGIFRIITRITSVIYPHKDRFFESAQRPLWGPLFTETVLRSQAPLCISRFFKVSAYATFVGNLSASLCNYTMHISPSTSHENLDLSTTHTFKQAMKRPDAKWKNPLRFSGPPSLIFSKPAYYPCPTDIKHCHTSPATPWMHCPQAPFGTCYNLTLFEPDNSTHPVTMSVNPTHFKVKLQGHRDPYPLSHYQPLTGAALSGQYSVWENEITVQENWDITSNIFSHLLSFSYAFCLNSSGVFFLCGTSTYICLPANWSGVCTLVFQYPDIELLPNNQTVPVPLFASVLSSDSVLRPKRSPHLFPFLAGLGISSALGTGIAGLATSTLYFQQLSKVLSETLEEIAASITTLQNQIDSLAGVVLQNRRALDLITAEKGGTCLFLQEECCFYVNQSGIVRDAARKLQERASELGQHSDSWGQWPDLGRWLPWLTPFLGPLLFLFFLLTFGSCLLNCLTRFVSQRLGSFVQDTAKRHVDSILQNFQYKKLPQDSPDEDTIPT", "length": 618 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BYG0-1", "protein_name": "Tetratricopeptide repeat protein 24", "gene_name": "Ttc24", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSSRQYGLSDVLRALEESRKLADADRSTDQGLLGPFYNDLGMGYFQLQLFPLAVEAFLQALPLCRQPSEQATVLQNLGMTHNVLGNYWEAQEFHQKAASLHGSVGQRWEQGRSFSGLAFSLSQLGDHRAAWDSYLHALQAAQDTGDVKGQWQACEGLGAAAARLGQHDQALKYYKEALALCQHEPSSVRERLVAKLADAMRTFVAQEKIAQARFLPSAPGKLQTSRKAKTSARVQSSAEDAQESQWEGEASEGGHEKKEMEGLVNTATVLGPQRQNRATTHLPSGGPSPSGEEYPFIIAPKKLRVSRSSTWAKEALGRNFQRTRIQSGLCSIM", "length": 334 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1N8-1", "protein_name": "Alpha-defensin 22", "gene_name": "Defa22", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKKLVLLSALVLLAYQVQTDPIQNTDEETNTEEQPGEEDQAVSVSFGGQEGSALHEKLSRDLICLCRKRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C1P2-1", "protein_name": "Alpha-defensin 21", "gene_name": "Defa21", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKTLVLLSALILLAYQVQTDPIQNTDEETNTEEQPGEDDQAVSVSFGGQEGSALHEKLSRDLICLCRNRRCNRGELFYGTCAGPFLRCCRRRR", "length": 93 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C5Y2-1", "protein_name": "Mitochondrial sheath formation-associated protein", "gene_name": "Misfa", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVLGWMLFVGLATYMGTFPEAMPPTLKWKERLPGQENKARRRIQALEEELLL", "length": 53 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CDW1-1", "protein_name": "Protein FAM228A", "gene_name": "Fam228a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MADTKTSKCDEHFSVEKLKEWPEPESVSLMELLAREDIDEAVHAVLFRENYVVKRLDTYLQHLAVFKERRKEMLHKKWVENVVQPLQQRITDKITSYRRPGKNQVKYEHCLKQTNKPTKVSSSCLFQKQQEFREAKGTSYQHGRGKTHDTQKEAKETEKGLSFTPFSLRPHCSSPRERQRASARLMQSKPGGRNRYKGASSEKPVFTLKSHLPKEEKTVSRSQLVFERQFRASRLSQDIKEAEKKGLVVGTGPQRPRSWAAADSVPRPSLVGRRVMTAEILGEHLVSLHQAARSGLQWP", "length": 299 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CEK3-1", "protein_name": "Serine protease inhibitor kazal-like protein, minor form", "gene_name": "Spinkl", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSTWIKFLFILTLVLLPYSVFSVNIFAGPENVIKEPNCTMYKSKSECSNIAENPVCADDRNTYYNECYFCIEKVVEKLKYRYHGICIYK", "length": 90 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IZP1-1", "protein_name": "TBC1 domain family member 3", "gene_name": "TBC1D3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDVVEVAGSWWAQEREDIIMKYEKGHRAGLPEDKGPKPFRSYNNNVDHLGIVHETELPPLTAREAKQIRREISRKSKWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKHIFFRDRYGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQDQQEHVVATSQPKTMGHQDKKDLCGQCSPLGCLIRILIDGISLGLTLRLWDVYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTRKKGDLPPPAKPEQGSSASRPVPASRGGKTLCKGDRQAPPGPPARFPRPIWSASPPRAPRSSTPCPGGAVREDTYPVGTQGVPSPALAQGGPQGSWRFLQWNSMPRLPTDLDVEGPWFRHYDFRQSCWVRAISQEDQLAPCWQAEHPAERVRSAFAAPSTDSDQGTPFRARDEQQCAPTSGPCLCGLHLESSQFPPGF", "length": 549 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K072-1", "protein_name": "Receptor expression-enhancing protein 4", "gene_name": "Reep4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVSWMICRLVVLIFGMLYPAYASYKAVKSKNIREYVRWMMYWIVFAIFMAAETFTDIFISWFPFYYEFKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSIPDTPVPTYQDPLYLEDQVPRRRPPIGYRPGGLQGSDTEDECWSDNEIVPQPPVRPREKPLGRSQSLRVVKRKPLTREGTSRSLKVRTRKKAMPSDMDS", "length": 257 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8MP30-1", "protein_name": "Uncharacterized histidine-rich protein DDB_G0274557", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MEIKYFLVLLVGFLLVLPSIVNPYRKGVTITNQQPKINIYQLDVNNPHNPNNNPHNPHNPNNNPHHPHHLHHHHHHHHHHHHHHHHHHHHHHHHHHPHHPHHHPHHHHHPHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHPHHHPHPHPHPHPHPHLHPNPHPHPHPHPHPHPHPHHHPNPNPHPHPHPHPHHHHHHQEASECLSYQGNRNRLFIKRDY", "length": 233 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8NG83-1", "protein_name": "Olfactory receptor 2M3", "gene_name": "OR2M3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFLLAVMAYDRYTAICHPLRYTNLMSPKICGLMTAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCSDTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGMYYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8NGV6-1", "protein_name": "Olfactory receptor 5H6", "gene_name": "OR5H6", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MFLYLCFIFQRTCSEEMEEENATLLTEFVLTGFLHQPDCKIPLFLAFLVIYLITIMGNLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMISLSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKALLYPVIMTNELCIQLLVLSFIGGLLHALIHEAFSFRLTFCNSNIIQHFYCDIIPLLKISCTDSSINFLMVFIFAGSVQVFTIGTILISYTIILFTILEKKSIKGIRKAVSTCGAHLLSVSLYYGPLTFKYLGSASPQADDQDMMESLFYTVIVPLLNPMIYSLRNKQVIASFTKMFKSNV", "length": 325 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R264-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r215", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNWNNIIHTIIFLSLTGPGIVGNMLIFIRHIYMPALGTEKKPVDLIVIHLAFSNMITICTTGIKDIATVFYFRNFLGDIGCKAVVFLARMARGLSICTTCLLSVVQAITISPRTSLWTKLKPQTACQIIPFILVFWIFNGLISSNLLSYIKGGSSLNRSVAATFIGHCYMLQSRHTIKWIFLSLMTLRDVIFQSLMGWSSGSMALNLYKHHKRVLYLYSSRFANNSPPEIRATWSVLILMTCFLLFYWADFILSFYHGFTVTHESILLNIKVFLELGYVSFSPYVLISRYIHPPNVFHAH", "length": 300 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R272-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r220", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVLQFIKKTIFLFMTMVGILGNMSVSVHYMFSWWGSPEKKPIHLILTHLTFTNIILLLAKGLQKTIIVFGLRNFLDDIGCKIIVYLERVARGLSICTSSVLTVVQAIIISPRASGWRRLRPKSAWHILPFFSFFWILNAFISVNLIHSIRSKGMNTSQHKNSDDYCYLTPESQKIKWIVLPLMVLRDAVFQGAMGGASGYMVFLLHKHHQHVLYLQNSKLLYRTPPELRAAQSVLLLMLCFLFFYWTDCALSLFLSLSLGDSSLMINIQGFLTLGYAIFSPFVLIQRDGLIPVCWHAQ", "length": 298 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R278-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r213", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLALRNYIQINTPWCMCLFVTPLTPCLPEYWDPDSLRVEGPTESSLRHNTASCTLKNTIMQNVQFRSMSSITDAFFKMYLHTRKEEMILKILKEITFLIMTVLGILGNMSVSVNYMFSWWGSPEKKPIHLILIHLIFTNIIILLVKGLPKTIAAFGLRNFLDDIGCKIIVYMERLARGLSICTSSLLTVVQAIIISPRASGWRRLRLKSAWHILLFFLFFWILNALISVNLIHSTTNTRLNVSQLKSDDNYCYFMLPIQKIKWIVLPLMVVRDAVFQGAMGGASGYVAFLLHKHHQHVLYFQNSKLLYRTPPELRAAQSVLLLMLCFVFFYWTDCAFSLFLTLSSEVNILMVNTRDFLTLGYATFSPFVLIHRDGLLVECRHVQ", "length": 384 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2A9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r229", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDFGNLAMGIVLSLQSALGILGNFSLLFYYLVLYNKERTLKIIDIILIHVFTSNSLIIFSKGLPEVLAVFGWNDLFDDVGCKLIMYVRRVSRSMSISMTCLLSVFQAITISTRNSCWKEFKEQTAKFMGLFISLCWILFMLVNMLFPVYTSTNRNSKNKTQKKDIEFCHSVGRDKMVDIMYTAFCVFPEVLFSLLIVSSSTTMIVILYGHKKRVQHILHTHASPRTSAENRATQTILILVCTFLAFYTLSSVLQGYVALSHDPSWWVMNITTIISMGFPAIGPFVMSRDFTVSRFCFTCIGNLKLP", "length": 306 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B6-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r178", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAHDKSLKTTDDMTLQILLLCQFVVGTVANVFLFLHNISPVLTGSKQRPRQLILSHMSVANALILFLTSFPDMMAFAPRNSPTHLKCKLEYFSRLVARSTNMCSTCVLSIHQFVTLVPVNRGKAILRASVPNLTSYSCYSCWFFSVLSNIYIAIKVTGPQITDNNTDSKSKLFCFTSGFSVGIFFLRIFHDGTFMSIMVWTSVSMVLLLHRHRQRMQHILTPNQDARGQAETRATHTILMLVVTFVSFYLLNFICIIFYTFSIDSRLFMSHFSKVFAAGFPTISPLLLIFRDPKYPCSVLFNC", "length": 304 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r64", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLSQNKTLKTMEVLALQILLLCQVVVGTVGNIFLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLFAYSYDLIDFVPRKPPTDLKCKLAYFFNMVAQGTIMCSTCLLSTYQFVTLVPGNWARVMFREISPKVVSYCCYSCWLFSVLNNAYMPMYVSGPQKTHNDSDSKDNWICSISGVSVDMNFLRFSHDIIFIGIMAWTSVSMVIHLNRHHHRMHYLHNPNQINRGHAETKAAHTIMMLVVTFVSLYILDCICSLFHISFVESRLWLIDVIELLHLSFPTVSPFLLICRDPMGPCSLLFIVGLEIHVTVGAITEEQ", "length": 320 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2B9-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEMLALQILLLCQVVVGTVGNILLFVHNFSPVLTDSRLRPIQVILINLAVANAFMLLLLTYSHDMIDFVPRKPPTDLKCKLAYFFHMVAQGTIMCSTCVLSTYQFVTVVPGTWARVMFREISPKVVSYSCFSCWLFSVLHNAYIPMNVSGPQKTHNDSDSKGNSICSISGVNVDMHFLRFSHDIIFLGIMAWTSVSMMIHLNRHHQRMNRIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFHISFVESRLWSRHVIKVLALSFPTISPLLLIFRDPRGHCSLLFSVGLEIHVTGGVITEEQ", "length": 310 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R2C0-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r62", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEVLALQILLLCHVVVGTVGNILLFVHNFSPILTDSRLRPIQVILINLAVANAFMLLLFAYSYDLTDIVPRKPPTDLKCKLAYFFHLVARGTIMCSTCVLSTYQFVTLVPGTWARVMFSEISPKVVSYCCYSCWLFSVLNNAYMLMNVSGPQKSHNDSDSKSNSICSISGVSVDMNILRFSHDIIFLSIMAWTSVSMVIHLHRHHQRMNHIHKVNQNNRGHAETRAAHTILMLVVTFVSLYILNCISILFYISFVESRLWLRYVTKLLALSFPTISPLLLIFRDSKGHCSLHIMSVWKST", "length": 300 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8R4R9-1", "protein_name": "Protein phosphatase 1 regulatory subunit 14C", "gene_name": "Ppp1r14c", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSVVTGGGEAAGGTSGGGARVFFQSPRGGTGGSRESSSHSGSSREDSAPVATVAAAGQVQQQQRRHQQGKVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPDVEIDIDDLLDADSEEERASKLQEALVDCYKPTEEFIRELLSRIRGMRKLSPPQKKSV", "length": 164 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8R4V1-1", "protein_name": "NFAT activation molecule 1", "gene_name": "Nfam1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESWLLRRGARVRCLHPPSWLPAWCFLCLLPVPQTLQLTGLVSLTHTSLPIMVSLANTDVFFSCRIEDFTRLQRDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVEGEETYQSDGVVILVRDTVYQPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKPPAESVYTSLQRRETEVYACMKEETGSPVFSQSPATKEKLNRFEDDNEFNLVYENL", "length": 264 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8T277-1", "protein_name": "5'-AMP-activated protein kinase subunit gamma", "gene_name": "prkag", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MWYPGDEDEEFTSIIENIEKKETQEIKIKTEKLRQASLNQLPIEQSEGVGGGELSEYNNNTTNNNTPTNTTTTTNTNTTTMNNSNNNNERILSTSNGFDIRLPPNSIEQPSPSFISSSQDGVLTVDPLAVDGEKGNKESQSPPNGDNQILNNNNMFFKDITSLPSTDNKSSTNTNNNNNENPLKQTISSSPSKSTTTTTTSTSTTTTPSLSSLSSNNNNNSNSNNNYINHSSISTVSEGLENLNLKSGIKKIDSETEKYIEEGKQVFVNFLKGHTCYDVIPISGKVVVLDTKLAVKSAFYALEENGIKSAPLWNSEQHDFTGMITVSDFIDILLYYYKKPKSNNIFQDMGIHRIETFWREISVERPSSLISTEPETNLYDAASLLLCYKIHRLPVVDKKDTNSILHILTHSRILAFMMKSFPQLPEKLLSIPIGSLGIGTFATVVTVMTHTPLVEVLELLSEKKISAVPIIDSETSKIVDVYSKSDVTLMSKQGILSPSDLNLPVHQVLSTFTKLWQRPEQIYTCTRFDKLGDVIERCIKKRVHRLVCIDSSKKVEGILSLSDILNYLLNDVKSINH", "length": 577 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8VEU4-1", "protein_name": "Olfactory receptor", "gene_name": "Or14j2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MIVENITTMRGFLLMGFSDNHELQILQALLFLVTYLLGSAGNVIIITITTLDPQLQSPMYYFLKHLSILDLSSLSVTVPQYVDICLTQSGYISYAQCMLQIFFFTGFAWGEVAILTVMSYDRYVAVCLPLHYEVIMGPSKCRWAVTAVWLSSVIPGTLYIASIFSIRFCGDRIIHQFFCDVPQVLKFSCSDDYLVTVGVADFLSAVAFACFIGIVNSYVHIFSTVLRMPSAESRSKVFSTCLPHLFVVLLFLSTGIFAYLNPTSDSPTALQFLVSIFYTVLPPTLNPVIYSLRNETIKSVIRKLLLSSKFTG", "length": 312 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VFX0-1", "protein_name": "Olfactory receptor", "gene_name": "Or5b101", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENRTEVRCFILVGLTNDPSLQLPLSITFLLIYIITLIGNLGLILMILLDSRLHTPMYIFLGNLSLVDFCYSSTVTPKVIAGFLTGDKIMSYNACASQMFFFANFGDVENYLLASMAYDRYVAVCKPLHYATTMTTHMCASLVIGCYICGFLSASIYTMDALSLSFCESNVIHHFFCDVLAVMIVSCSDSHVNELILIYVVSFNMFFALIIILISYMFIFTNILKIHSSAGYHKAVSTCASHFTAVSIFYGTIIFMYLQPSSSHTMDTDKIASVFYTMVICMLNPLVYSLRSKDVKSAFTKIVLRSK", "length": 307 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8VY69-1", "protein_name": "Vesicle-associated membrane protein 723", "gene_name": "VAMP723", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK", "length": 217 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ67-1", "protein_name": "Uncharacterized zinc finger CCHC domain-containing protein At4g19190", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGEGEGSGIRLSKRFAGGKVTGGSLEVDYKTKSGTAWSHSFLNQKPWHPLSYPNQRRKWIAEQTHAQHDRRAEEVAREFAQEQEFFKQAALISKKEREKIETMKAVSFMYVRPPGYDPESAKAAEYKDEKHKGQGSSTQDPVADDNVGSRPEESQGGGERTQERKKPRPKDVFGRALPTEEEFEVLKNAPRMETGIPGRVKPFAVEVRNVKCLRCGNFGHQSGDRDCPLKDAVMPNEELRLKRDDPLTAIIAHTDPSEPLKWELKQKPGLSPPRGGFDPDDPNQQIVAEDIFDEYGGFLEGSIPIEILKSMSSDKKRKSKKNKRHKKHSSRTVEETDESSTGSEDSREKRGSKKRKKLKKKSKKQYDSDSLSFEGSGSDSYRLSRRRHTKHVDPSASLKSEVYHQGNSHREKHYYDEKHQKRKEIVDRPSASSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSNDPVSEKSQKQHYSESGKIQRVEKEHRYDERRHRYVDMESENRNRSEKKPRYDDRDSEKHHRSVKGKEKHVYEASDDPEEFSDRYRSTKKTESDSESNRRSRKKKHELSSEEEEGESRKHRYSTNRRRN", "length": 595 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q91V82-1", "protein_name": "Beta-defensin 8", "gene_name": "Defb8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MRIHYLLFTFLLVLLSPLAAFSQKINEPVSCIRNGGICQYRCIGLRHKIGTCGSPFKCCK", "length": 60 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q923B3-1", "protein_name": "Neurotrophin receptor-interacting factor 1", "gene_name": "Nrif1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASTLPTTWPHESVKFEDVSLTFTEEEWAQLDFQQKCLYREIMMENYSNMISVEHHFSKPNVISQLEKAEDCWPMQREIPQDTLPECSWPSPDPGMNSFPSKSPLMKIEVVEVLTLNKDVAGPRNALIQSLYPEDLNPGNLKPAQQPSKRLTDTEASRQKFRHFQYEESAGPQKAMSQLRKLCHQWLQPNTRSKKQILELLVLEQFLNALPEKFRVWVESQHPEDCKAVVALLENMTSVSKDDASLACSSEATDQLKEKRKGVATLPVTFAAEVPAEEPVTFQDVAVDFNEEEWRLLGPTQKTEYHDVMLETLGNLVSVGWEPTLGNRELTPDSPIPVVKPIHDPNTNDLSRNGTQSTVFESILEDGVKEMHSIESNQVGNLQEKGHPQKKFSESSKSQDQTSRHKSQGSLNEVLPRKYVKVKQKGTGKRKGRTNTISMTRGLRIRKQQKDSVEWQGRSGSTPVTHGSSIKKQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSEESIFMDSSDAMVPDVPPKIHQKGPEWHKVGESNNSMLQGSSVQNHQMESGAGRASDNSLLTHALPVKSHQKGYKEGNVQGNRNSWKHIKPHQKGSKGERVEELSTSEKHVPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCRKAFSLHAQQISFIKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQHLRIHSGERPFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGKAFTQSSHLIGHQKTHGIKFKKQPKL", "length": 828 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q924S2-1", "protein_name": "Inactive 2'-5' oligoadenylate synthetase 1C", "gene_name": "Oas1c", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MENGLCSIQARELDEFICDYLFPDTTFLTELRADIDSISAFLKERCFQGAAHPVRVSRVVMGGSYDEHTALKGKSEAKMVLFFNNLTSFEEQLKRRGEFVEEIQKHLCQLQQEKPFKVKFEVQSSEEPNSRSLSFKLSSPELQQEVEFDVQPAYDVLYELRNNTYAEPQFYNKVYAQLIHECTTLEKEGDFSICFTDLHQNFMRYRAPKLWNLIRLVKHWYQLCKEKLREPLPPQYALELLTVYVWEHSNKNQEKVTTAKNFRTFLELVAYYKNLRIYWTWYYDFRHQEVCAYLCRQLKKARPLILDPADPTRNVAGSDLQAWDLLAKEAQTWMQSSCFRNCDMSFVPTWDLSPERQECAFQ", "length": 362 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q925U0-1", "protein_name": "Oocyte-secreted protein 1", "gene_name": "Oosp1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKPFVGLLGLLLLLSFMKTCADDWTAISLQCADHWFHLRIRPTIFHNIFMEPDEVFLGIGCPVTTTWPNDTYEFIYRTYSCGIANKVLCDVTLLKTQLTYISKNASLQAEMSLSCVMHNQSPHFCEAESRGDFTGDPPGWTEDMRARRDEQTVPMVQPNLSTSSEDHHVSTEPWASETSRSEAAEVPSFMDQNFSVFHFSRM", "length": 202 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q94490-1", "protein_name": "Ubiquitin conjugating enzyme E2 B", "gene_name": "ubcB", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MAAHKRLQKEITDMLKTPPSWCSAHLVDDNLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFSTWSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKYAK", "length": 148 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q945S5-1", "protein_name": "Vacuolar cation/proton exchanger 4", "gene_name": "CAX4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSSISTESSSNLSLLENGGGGSDKPTAETSRRVRRTVSASSLIRKRSDLKLISRVRWEFMRRILTNLQEVLLGTKLFILFPAVPLAVVAHRYDCPRAWVFALSLLGLTPLAERISFLTEQIAFHTGPTVGGLMNATCGNATEMIIAILAVGQRKMRIVKLSLLGSILSNLLFVLGTSLFLGGISNLRKHQSFDPRQGDMNSMLLYLALLCQTLPMIMRFTMEAEEYDGSDVVVLSRASSFVMLIAYLAFLIFHLFSSHLSPPPPPLPQREDVHDDDVSDKEEEGAVIGMWSAIFWLIIMTLLVALLSDYLVSTIQDAADSWGLSVGFIGIILLPIVGNAAEHAGAVIFAFRNKLDITLGIALGSATQIALFVVPVTVLVAWTMGIEMDLNFNLLETACFALSILVTSLVLQDGTSNYMKGLVLLLCYVVIAACFFVSNSPSSKLLF", "length": 446 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNPQIRNPMERMYRDTFYDNFENEPILYGRSYTWLCYEVKIKRGRSNLLWDTGVFRGPVLPKRQSNHRQEVYFRFENHAEMCFLSWFCGNRLPANRRFQITWFVSWNPCLPCVVKVTKFLAEHPNVTLTISAARLYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYCWENFVCNEGQPFMPWYKFDDNYASLHRTLKEILRNPMEAMYPHIFYFHFKNLLKACGRNESWLCFTMEVTKHHSAVFRKRGVFRNQVDPETHCHAERCFLSWFCDDILSPNTNYEVTWYTSWSPCPECAGEVAEFLARHSNVNLTIFTARLCYFWDTDYQEGLCSLSQEGASVKIMGYKDFVSCWKNFVYSDDEPFKPWKGLQTNFRLLKRRLREILQ", "length": 386 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q99N64-1", "protein_name": "Germ cell-less protein-like 2", "gene_name": "Gmcl2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MGLLVSRVLRCRDSSLLEPQPEAIAGASYIPGSRKRKRNSLEELATSSNVHGPQNQGMYPHQVLNYIYWKRVKISSNDAYQNLFLDGHDSDIKIRALGRTWCLHKVFLCQSGYFANILKGTWRESHHGVINLIIKNEDIDTRSLHFVFGALYTDADLSITPLEVPQVLAAACLLRVDRVIQQCEGIMKETINRNTVCSYYLAAETYRLKAVKTRCFEWLLCNLMVHPSVALYKEVDLKLMYLLALSSDLLVMQKEIDVYTTLKIWMFLYLNPCWNGTMKQLLQHANNWLSTHMAYVDNISFLESEEGLIFQPVFKKLRFQHIICDLTSTTILEQDRLIPMAWLSPIYKQQWLTLLRTQEYGVIGPQVINEQELEECTMRCGTMIPKDGRYTWKWSVGRLGFPLRVTFTRQCVILRQRCQRCDGSACHNHIRNVIFRITLVCFDSNKRVTFRKTTGYKILTFEYKEEQIVMKLDSDVLTFPMCIFCNFLFVNLGNAENK", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9C7P4-1", "protein_name": "Putative zinc finger CCCH domain-containing protein 9", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MADAGDNQQEAERRSDETESRSIKEPKEKEDEDENPQDQIQSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKHIMDRNVAEPMYQDWRESESERRFDERTQRTFGDERTQRRYGIEYSGARPEKRSKIVPDFQMRDPRHHDTEWRFERERMERIERQRREAEENLQEQRQRDSIERQRREAEENLQEQRQRDSIERQRREAQENLQQQRQRDSIERQRREAQENLQQQRLQDMPENHNVDDQQNLQEQRRISIEKERTEARLRLEQIRPTVSFPINEFIRAVVLLRELIENWDDKAWKK", "length": 321 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C8M4-1", "protein_name": "DNA-directed RNA polymerase subunit 12-like protein", "gene_name": "NRPB12L", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDLQQSETDDKQPEQLVIYVCGDCGQENILKRGDVFQCRDCGFRILYKKRILDKKETRIGV", "length": 61 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9CQK8-1", "protein_name": "Small proline-rich protein 2A1", "gene_name": "Sprr2a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSYYQQQCNQPCRPPPVCPPPKCPEPCPPQVWPGPCRPVMCFEPCLPSVWPGPCRPVVCYEQCPPQPWQSTCPPVQFPPCQQK", "length": 83 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CWP4-1", "protein_name": "Lymphocyte antigen 6K", "gene_name": "Ly6k", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLVALLVVLGLQLVQSNALTCHVCEAQNSYACSNPSQCPGEKKFCLLAVTRIFERFFYVSKQCTRRCPTPVVSPPSTNPPSEPKEFLIEKPMPFLFYKCCQWDSCNGEGPPTDQLLKEQPGKASGRRHRYIELLLTGFMVLTANGLSALCLL", "length": 154 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D541-1", "protein_name": "Coiled-coil domain-containing protein 7A", "gene_name": "Ccdc7a", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKCAKHPSTISMKLTSVPELPYKKGLLNSSPKPKEKHNAKSKYGKNESMVLRSPPTGESIVRFALPIPLSKTKDKISADEMVRRITTNLKMVVSNLEDTYGACYDNGEKAAEKSEAEGLSIGDDVSSFLLCCSQFTSQLEEAVKEECGALESLYKWFQQQVNQMEEISKDQSNLEELQSDGKTASLNIVQIAKLARKFEDFKSRLKTRKEVMQTKNEDKEIMAETLKHYGLMEKQIEEFITSHSALESQTETESQSGTPSVTTRMARMIKIFENQSTMLEKALNDQQTIESKYKQLETDFQMLIMEKTLLEAEIRRLREIERVKSAAKEEQTKKSGKSEKKKFKEKEKNLSPNREFKSIEELLQIQKEAELLKTEKKTLQGQLKWALEEAERNKTQLEFVLHQKMEMFKEESKTKVGQSQNKSKVKIEDSKDSLPKKSDTQLGGQRKDQISSDQSKRPKKKQLADIDPSAVEDFPPETFKSFTVMPLIEEHRESISSQPKEEMAKASEQSEAEDIEGPLEIPSESSNEDDDLLPEDESPMMEQVTDVGRYKSIYISAEPIDTMSLISRTQSEMETLEAINYDNVLNEGEEQDKKIGKDSDTGRKSKRKRSSKIRKLSTHEEESDIVHYEEATKAKVPSKKRASDPYGDEAYESRGSVSKAQTYTKKQGTHQRGRGSASDAYGDEAYESRGSISKAQTYTRKQGTHQRGRGSVQEEESDTVHYEEVTRAKVPSKKQASDPYGDEAYESQGSVSKAHTHTKKQGTHQRGRGSVHEEESDTMNYEVPRKSKISSRRKGFALPITHQVEMHSSESQGSISKSNTETKKQGTHKRGRDSDADGARTPVSQGSDSKADTERKKHRSKEESTISKDSIPVLDEVQDKTFEHQESGLRLEVQAKKLTFSSQNIHNEESATDIKVEYQNVPSSSQVQLKKQKPLGGEIFTTHFVVPAESHAQLYQTHTPETQIERGTTSGTARLTTIPVEHPKKEASPDNLFPEKKLYITRAPTQTKKQYPPWDAKAETQKKTVKEVQGISEPQTKLNPTMSGIILHLDMDRVVETDLENLEETIVPHVLRSELEIGTDAKNMPETPTSREAVRTEAKGNQDVTISIAKGMKLIGKLKDQHGLSSFASKDTISPGKSLIKSSRDNQDDSLLETKPQENTSDKYHPSKTFPTKVINMLPFSEKSLGSTSANVDVAPKPVYRASRGRSRISKALQQLLKTSEHLKPTSTKNQNADLEKHLYISVRSANKHTQKDKKHGQSNNQKLKKQGALSSTKKQKHKEQPKTETIVENNDKFDDNLMMTTSSPNIKIIKELSKTLNLDGGDIELSDFVFKTASAAKKLENKGPSKTKNLNKESSRDIHILHLTTSAIRTLLLDEEAKIRSLEKKLMKQSTILQKSVSSMKKFMFEEPSRETKMKRKKREKRKIVVKSPHILPITTTQKHTIKEKSEISNLEKPIVRGTDILKKSTSARKKRVLKGKSKSATLPKKCDNFPFDLVRSSSDSSKQEVEEQPKPGNVDKKVSDDSYSPDISTTPTKKHTLKGQSKSRTIYEKGVDLPNNLVLSKSASSIQEFEEQPQPGNVDKKVSDDSYSPDISTSPTKKHTLKGQPKSENSDEKGIKRPNNLHMSASVARKRLLKALSTIP", "length": 1642 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5R2-1", "protein_name": "WD repeat-containing protein 20", "gene_name": "Wdr20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATEGRGKETNEIKTHFTTREGLYRLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQTGNGNRLCFSVGRELYVYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSDSLFLVAHSSGNMYSYNVEHTYGTTAPHYQLLKQGESFAVHNCKSKSTRDLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSAELHGTMKSYFGGLLCLCWSPDGKYIVTGGEDDLVTVWSFLDCRVIARGRGHKSWVSVVAFDPYTTSVEESDPMEFSDSDKNFQDLLHFGRDRANSTQSRLSKQNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARAHANVMNATGLPAGSNGSAVTTPGNSVPPPLPRSNSLPHSAVSNAASKGSVMDGAITSGVSKFALLSLHDRKERHHEKDRKRNHSMGHISSKSSDKLNLVNKAKTDPAKTLGTSLCPRMEDVPLLEPLICKKIAHERLTVLVFLEDCIVTACQEGFICTWARPGKVSKFQP", "length": 567 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DAF8-1", "protein_name": "Uncharacterized protein C4orf51 homolog", "gene_name": "", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTPLPGSSAYNTLPGHAGSQEAADGKGRLPDIASPSRDSPLNIKHKVAHQIWGSEVPCPTFLAYRGLRMSPCMQPKKPGFELLMSYRNRGKALLKRLQRQWDYESKLGSSEDSGTDRFSSNTSGSSGRKFK", "length": 208 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPV9-1", "protein_name": "Beta-defensin 5", "gene_name": "Defb5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKIHYLLFAFLLVLLSPLAGVFSKTINNPVSCCMIGGICRYLCKGNILQNGSCGVTSLNCCKRK", "length": 64 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9EPX4-1", "protein_name": "P2Y purinoceptor 12", "gene_name": "P2ry12", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEVPGANATSANTTSIPGTSTLCSRDYKITQVLFPLLYTVLFFAGLITNSLAMRIFFQIRSKSNFIIFLKNTVISDLLMILTFPFKILSDAKLGAGHLRTLVCQVTSVTFYFTMYISISFLGLITIDRYLKTTRPFKTSSPSNLLGAKILSVAIWAFMFLLSLPNMILTNRRPKDKDITKCSFLKSEFGLVWHEIVNYICQVIFWINFLIVIVCYSLITKELYRSYVRTRGSAKAPKKRVNIKVFIIIAVFFICFVPFHFARIPYTLSQTRAVFDCNAENTLFYVKESTLWLTSLNACLDPFIYFFLCKSFRNSLMSMLRCSTSGANKKKGQEGGDPSEETPM", "length": 343 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9ER80-1", "protein_name": "Receptor-transporting protein 4", "gene_name": "Rtp4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLFPDDFSTWEQTFQELMQEEKPGAKWSLHLDKNIVPDGAALGWRQHQQTVLGRFQCSRCCRSWTSAQVMILCHMYPDTLKSQGQARMRIFGQKCQKCFGCQFETPKFSTEIIKRILNNLVNYILQRYYGHRKIALTSNASLGEKVTLDGPHDTRNCEACSLNSHGRCALAHKVKPPRSPSPLPKSSSPSKSCPPPPQTRNTDFGNKTFQDFGNRTFQGCREPPQREIEPPLFLFLSIAAFALFSLFTR", "length": 249 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9FFP9-1", "protein_name": "Serine/threonine-protein kinase SRK2H", "gene_name": "SRK2H", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIQRIMAVQYKIPDYVHISQECRHLLSRIFVTNSAKRITLKEIKKHPWYLKNLPKELTEPAQAAYYKRETPSFSLQSVEDIMKIVGEARNPAPSSNAVKGFDDDEEDVEDEVEEEEEEEEEEEEEEEEEEDEYEKHVKEAHSCQEPPKA", "length": 360 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDGSSEKTTNKLVSILPNYRIGKTLGHGSFAKVKLALHVATGHKVAIKILNRSKIKNMGIEIKVQREIKILRFLMHPHIIRQYEVIETPNDIYVVMEYVKSGELFDYIVEKGKLQEDEARHLFQQIISGVEYCHRNMIVHRDLKPENVLLDSQCNIKIVDFGLSNVMHDGHFLKTSCGSPNYAAPEVISGKPYGPDVDIWSCGVILYALLCGTLPFDDENIPNVFEKIKRGMYTLPNHLSHFARDLIPRMLMVDPTMRISITEIRQHPWFNNHLPLYLSIPPLDTIDQAKKIEEEIIQNVVNIGFDRNHVVDSLANRIQNEATVAYHLILDNRNQNSVPNDPFQSKFKEISDGIFNSTLPVQNITSHVGHSFSALYGLKSNVKDDKTWTLGLQSQGSPYDIMTEIFKALQNLKICWKKIGLYNIKCRWVRSFAYYKNHTIEDECAIILPTVIKFEIQLYKVREGKYLLDILRIDGPQFIFFDLCVAFLRELGVL", "length": 494 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVV4-1", "protein_name": "DEAD-box ATP-dependent RNA helicase 55", "gene_name": "RH55", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MDSSPPNTIIEEAPPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLFSATQTQAVADLAKAGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAIKDREVLEKGLKAFVSFVRAYKEHQCSYIFSWKGLEIGKLAMGYGILSFPYISEVKQDRIGIVGFTPVQGITFEDIKFKNKSREKQRQQNLLARKDKLQQEKRGKRKKSSKEAVDDSNKASRKRKLTGRQRQTIQTAQDEEEMNLRL", "length": 465 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9JI02-1", "protein_name": "Secretoglobin family 2B member 20", "gene_name": "Scgb2b20", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGTLLLLGLLVTGELSFQTTEACLPFFEGYASVLSGSRVWLYQELQAFNATAEEKVALEKIQDCFSEERIRNILLEPKIMEAMVASPECLSYYGLDNIRSILDYISKLLGE", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JJQ7-1", "protein_name": "X-linked lymphocyte-regulated 4B", "gene_name": "Xlr4b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MASKIKGRPPKQPKVTPALPSNDSQQLHENNPGNNLALETCGESSSSHGTGGPKPGPSKKTLNERKRKYGVSVNKTVQNIEWNVDHFLKVQHERRQELYKDYSHQFLTLVMMWNIDVDQIKKQAGKLSDILDEQQKLFQQFQSIHMQKIEEFKELCDRHLKNLQAIKCCRRKAIIEEARKLMDYLEKRVTEETVHVNKQEAKDGVQSSLLSLLIS", "length": 215 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLV9-1", "protein_name": "Prolactin-2C5", "gene_name": "Prl2c5", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MLPSLIQPCSWILLLLLVNSSLLWKNVASLPMCAMRNDRCFMFFEDTFELAGSLSHNISIEVSELFTEFEKHYSNVPGLRDKSPMRCHTSFLPTPENKEQARHIRYEALLKSGDMILDAWENPLDYLVSELSTIKNVPDIIISKATDIKKKINAVQNGVNALMSTMNGDEENKNPAWFLQSDNEDARIRSSYGMISCLDNDFKKVDIYLNILKCYMLKIDNC", "length": 222 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9LJY9-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 18", "gene_name": "CYP705A18", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATLISVDFQHCFMYIILLCLFSLLCYSLFFRKPKGTRVGCDLPPSPPSLPIIGHLHHLLSSLTHKSLQKLSSKYGPFLHLRIFSVPIILVSSASVAYEIFKAHDVNVSSRGAAAIDESLLFGSSSFIYAPYGDYWKFMKKIFATKLLRPQVLENSRGVRAEELKRFYRRILDKARKNENIEISKESAMLMNNILCRMSMGRSFSEENGEAERVRGLVGESYALVKKIFFAATLRRLLEKLRIPLFRKEIMGVSDRFDELLERIIVEHKDKLEKEHQVMDMMDVLLAAYRDKNAEYKITRNHIKSFFVDLFVGGTDTSVQTTQWTMAEIINNPNILQTLRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPPGPLLIRTFQERCEMKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLSYSRSGQEDEKEQTLKYLSFGGGRRGCPGVNLGYIFVGTAIGMMVQCFDWKIEGDKVNMEETYGGMNLTMVNPLKCTPVPRTQPFSFTSNLEILSS", "length": 524 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSY1-1", "protein_name": "SKP1-like protein 8", "gene_name": "ASK8", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAANPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE", "length": 152 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTG5-1", "protein_name": "Callose synthase 4", "gene_name": "CALS4", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MNQPNRGQILQTVFSHFFPVASPDSELVPSSLHEDITPILRVAKDVEDTNPRSLFLQDLDIKSVDDSINILSGHSHALDKANELDPTSSGRDVRQFKNTILQWLEKNNESTLKARQKSSDAHEMQSFYQQYGDEGINDLLNAGAGSSSSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSKNHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLILLLANVQMRQTQRQPNLLDDRALDTVMEKLLGNYNKWCNHVGLESSLRFPKDKQQKVVQQRKLLYTGLYLLIWGEAANLRFMPECLCYIYHHMAFELFEMLESKGSKKKYKPKNPTYSGKDEDFLTKVVTPVYKTIAEEAKKSGEGKHSEWRNYDDLNEYFWSKQYLDKLGWPMKANADFFCKTSQQLGLNKSEKKPDLGDGCVGKVNFVEIRTFWHLFRSFDRMWSFYILSLQAMIIIAWNETSESGGAVFHKVLSVFITAAKLNLFQAFLDIALSWKARHSMSTHVRQRYIFKAVAAAVWVLLMPLTYAYSHTSIFIVAILIYLSPNMLPEMLLLIPSIRRTLEKSDFRPVKLIMWWSQPELYIGRGMHESAWSIYKYMMFWIVLLTSKLAFSYYVEQIKPLMGPTKEIMSVPMPGYWLPEFFPHVKNNRGVVITLWSPVILVYFMDTQIWYAIVSTLVGGLYGAFRHIGEIQTLGMLRSRFQSLPGAFNACLIPNENTKEKGIKLAFSRKCHKIPNTNGKEAKQFSQMWNTIINSFREEDLISNRELELLLMSCWAYPDLDFIRWPIFLLASKIPIAVDIAKKRNGKHRELKNILAEDNCMSCAVRECYASIKKLLNTLVTGNSDLMLITTVFTIIDTHIEKDTLLTELNLSVLPDLHGHFVKLTEYVLQNKDKDKIQIVNVLLKILEMVTKDILKEEIKRLHLLLTVKESAMDVPSNLEARRRLTFFSNSLFMEMPGAPKIQNMLSFSALTPYYSEDVLFSTFDLEKENDGVSILFYLQKIFPDEWKNFLERVKCGTEEELDAIDYLKEEIRLWASYRGQTLTKTVRGMMYYQKALELQAFFDLANERELMKGYKSAEASSSGSSLWAECQALADIKFTYVVACQQYSIHKRSGDQRAKDILTLMTTYPSLRVAYIDEVEQTHIYSKGTSENFYYSALVKAAPQTYSTDSSDSGHMLDQVIYQIKLPGPPIIGEGKPENQNNAIIFTRGEALQTIDMNQDYYIEEAFKMRNLLQEFLEKNGGVRYPTILGLREHIFTRSVSCLAWFMSNQEHSFVTIGQRVLANPLKVRFHYGHPDVFDRVFHLTRGGVSKASKVINLSEDIFAGFNSTLREGTVSHHEYIQVGKGRDVGLNQISMFEAKIANGSGEQTLSRDLYRLGHQFDFFRMLSCYFTTVGFYFCSMLTVLTVYVFLYGRLYLVLSGVEKELGNKPMMMEIILASQSFVQIVFLMAMPMIMEIGLERGFYDALFDFVLMQLQLASVFFTFQLGTKFHYYCKTLLHGGAEYRGTGRGFVVFHAKFAENYRFYSRSHFVKATELGILLLVYHIFGPTYIGLFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWIEYDNGGIGVPPEKSWESWWEKDIEHLQHSGKWGIVVEIFFALRFFIFQYGLVYQLSAFKNKYSSLWVFGASWLLILILLLTVTVLDYARRRLGTEFQLLFRIIKVSLFLAFMAIFITLMTCRLILPQDVFLCMLALIPTGWGLLLIAQSCKPLIQQPGIWSWVMTLAWVYDLVMGSLLFIPIAFMAWFPFISEFQTRMLFNQAFSRGLHISRILSGQRKHRSSKNKD", "length": 1871 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LU95-1", "protein_name": "Pyruvate kinase", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEMLLGGQATNGALRSKTKIVCTLGPASRSVEMIEKLLKAGMNVARFNFSHGSHSYHQETLDNLRTAMDNTGILCAVMLDTKSPVIRTGFLKEGKPIQLKQGQEITISIDYKIQGDSNTISMSYKKLAEDLKPGDVILCSDGTISLNVLSCDKYLGLVRCRCENSALLGERKNVNLPGIVVDLPTLTEKDKEDIMQWGVPNKIDIIALSFVRKGSDLIQVRKLLGEHSKSIMLMSKVENQEGVMNFDKILENSDAFMVARGDLGMEIPIEKMFLAQKTMINKANAHGKPVVTATQMLESMTVSPRPTRAEATDVANAVLDGTDCVMLSGETAAGAHPETAVLTMSRICKEAEDFIDYDILHKKTLGMVSLPLSPIESLAASAVSTARSVFASAIVVLTRGGYTAELVAKYRPSVPILSVIMPEIAECSDSVAHVARRGLIYRGIIPVVGCSARDSTEEMIRLAIGFAKTKGICKTGDSIVALHKIDGSSIVRIVSVE", "length": 497 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LX08-1", "protein_name": "Annexin D6", "gene_name": "ANN6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MASLKIPANIPLPEEDSEQLHKAFKGWGTNEGMIISILAHRNATQRSFIRAVYAANYNKDLLKELDGELSGDFERVVMLWTLDPTERDAYLANESTKLFTKNIWVLVEIACTRPSLEFFKTKQAYHVRYKTSLEEDVAYHTSGNIRKLLVPLVSTFRYDGNADEVNVKLARSEAKTLHKKITEKAYTDEDLIRILTTRSKAQINATLNHFKDKFGSSINKFLKEDSNDDYVQLLKTAIKCLTYPEKYFEKVLRRAINRMGTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA", "length": 318 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LXS7-1", "protein_name": "Citrate synthase 1, peroxisomal", "gene_name": "CSY1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEISERARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADWEFAISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDKQIVRVLGQAPTIAAAAYLRKAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLARVLDILFILQAEHEMNCSTAAARHLSSSGGDVYTAVSGGVGAIYGPLHGGAVEATINMLSEIGTVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGRDPLVEVGDALEKAALSDEYFVKRKLYPNVDFYSGLINRAMGIPSSFTAVSRIAGYLSHWRESLDDPDTKIMRPQQVYTGAGIRHYETVRERTKL", "length": 480 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY06-1", "protein_name": "Glycine/proline-rich protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MITCILKISISSFIVLRIFSFLWFSRWFCCGLCGRFWFRCWFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLTIGFTIGFDSGFATFLDVGLDDGFATGLDISFAGGFVTGFATDFDVGFDTGFTIGFDTGFDVGLPAVFSIGFDTGFAVGFAISFTVGFDAGFPTGFFVSLDVGFVADFVIGFATGIGVGFEVDFATDFDTCFATGFAVSFDVGFAGGFSIGFAADFANGFTVGFDGGFDASFFVGLDVGFVVGFVTSFAAGLDVGFAIDFATGFDTGFAFGLAFGFDVGFAAGFAVGFATGFTVVFDVGFASDFFVGLDVGFLTGFATDFDIGFVVDFDIGFATGFVVGFDDGSIVGLVVGLPASLDDGLAIDFVVGLDIGFVTGLFVGLVDGLTTDLDVGLVDGLDDGLDDGLDVDLVVVGFVVDGLAVDLDVGLGVGLTVGFVDGLDVGFDDGLDADTVDGLDVGLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDGLDVDLDDGLDVDLVDGLDIGLDDGLDVGLDDGLDFGLVDDGLVVGLFDVFVGTGLSWEIPPPGKLPPDASPLGIGSFGVGPPGASPFIASPSGEGPLSEGLLGIRSFGISPLSIRPLGISPLGISPPNIEPSKADASDADPSNAGPLGISPLSIDPPVAGASDEGPLGKLPPDLSPPGKGSSGEGPLVESPPSEGPLGVDPLGAGSLGISPLGKSPLRIRPLGISPFGKIPSNIDPSSALASDGGPPDEPASAEGSPDVGIFGISPPIIDPPVEGASDGDPPEKLSLDISPLGKGPSGVSLLGAGPPGVGPVIASPPGEGPRDAGPLGAGSLGISPLNIRRLGISPSGISPPNIDLPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGESESDGDPAGKLPLDISPLSKGPSCVSPLGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLSISPFGISPSSIDSPVAGTSIGGPPDEGASDGGPPDVGPFGISPPIIDPPGEDASDGDPPGKFPLDISPLGKCPSGVSPLGVGPPGVGPVIASPPGEGPLDAGPLGAGSLGISPLNIRRLGISPFGISPPNIDLPVAGTSIGGPLDEGASDGGPPDVGPFGISPSIIDPPGEGAFDGDPPGKLPLDISPVGKGPSGVSPPGAGPPGDGPVIASPPGESPLDAGPLGAGSLGISPFGISPPNIDWPVAGTSFGGPPGEGASNGGPLVVGPFDMPVVGASDGDALEKLPLDISLPGKGPSDVGPPGAGLPGAAPPGVDLSNVGASDRGASGEGASDGCPPDVGPFDICLLSIDPPVVGASDGGPPDEGASNGGPPDTDSFGGDPLCASPLGIDPPIVDASDGDPFGAGSPDEDPSNENASGEGASGESPPCSDVSCKGPSSAGASIGCSLDNGASTPSSPDTFLSNVFPSDKSSPDAFSPDVAALVTLPSGKDPFDISPPIVALLDVSPLGKTSSDAYSSGISPGIFEKSFPLVKLQTIEYM", "length": 1504 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M2S0-1", "protein_name": "Probable mannose-1-phosphate guanylyltransferase 2", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKALILVGGFGTRLRPLTLSLPKPLVDFANKPMILHQIEALKAIGVDEVVLAINYEPEQLLVMSKFSNDVEATLGIKITCSQETEPLGTAGPLALARDKLVDGSGQPFFVLNSDVISDYPLEEMIAFHNAHGGEASIMVTKVDEPSKYGVVVMEEATGRVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEIFPQIAEAEKLYAMLLPGFWMDIGQPRDYITGLRLYLDSLRKKSPSKLATGPHILGNVLVDETAEIGEGCLIGPNVAIGPGCVVESGVRLSHCTVMRGVHVKRYACISSSIIGWHSTVGQWARVENMSILGKNVYVCDEIYCNGGVVLHNKEIKSDILKPDIVM", "length": 364 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9NR96-1", "protein_name": "Toll-like receptor 9", "gene_name": "TLR9", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MGFCRSALHPLSLLVQAIMLAMTLALGTLPAFLPCELQPHGLVNCNWLFLKSVPHFSMAAPRGNVTSLSLSSNRIHHLHDSDFAHLPSLRHLNLKWNCPPVGLSPMHFPCHMTIEPSTFLAVPTLEELNLSYNNIMTVPALPKSLISLSLSHTNILMLDSASLAGLHALRFLFMDGNCYYKNPCRQALEVAPGALLGLGNLTHLSLKYNNLTVVPRNLPSSLEYLLLSYNRIVKLAPEDLANLTALRVLDVGGNCRRCDHAPNPCMECPRHFPQLHPDTFSHLSRLEGLVLKDSSLSWLNASWFRGLGNLRVLDLSENFLYKCITKTKAFQGLTQLRKLNLSFNYQKRVSFAHLSLAPSFGSLVALKELDMHGIFFRSLDETTLRPLARLPMLQTLRLQMNFINQAQLGIFRAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCSTLNFTLDLSRNNLVTVQPEMFAQLSHLQCLRLSHNCISQAVNGSQFLPLTGLQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQGVGHNFSFVAHLRTLRHLSLAHNNIHSQVSQQLCSTSLRALDFSGNALGHMWAEGDLYLHFFQGLSGLIWLDLSQNRLHTLLPQTLRNLPKSLQVLRLRDNYLAFFKWWSLHFLPKLEVLDLAGNQLKALTNGSLPAGTRLRRLDVSCNSISFVAPGFFSKAKELRELNLSANALKTVDHSWFGPLASALQILDVSANPLHCACGAAFMDFLLEVQAAVPGLPSRVKCGSPGQLQGLSIFAQDLRLCLDEALSWDCFALSLLAVALGLGVPMLHHLCGWDLWYCFHLCLAWLPWRGRQSGRDEDALPYDAFVVFDKTQSAVADWVYNELRGQLEECRGRWALRLCLEERDWLPGKTLFENLWASVYGSRKTLFVLAHTDRVSGLLRASFLLAQQRLLEDRKDVVVLVILSPDGRRSRYVRLRQRLCRQSVLLWPHQPSGQRSFWAQLGMALTRDNHHFYNRNFCQGPTAE", "length": 1032 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9QUG3-1", "protein_name": "Prion-like protein doppel", "gene_name": "Prnd", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKNRLGTWWVAILCMLLASHLSTVKARGIKHRFKWNRKVLPSSGGQITEARVAENRPGAFIKQGRKLDIDFGAEGNRYYAANYWQFPDGIYYEGCSEANVTKEMLVTSCVNATQAANQAEFSREKQDSKLHQRVLWRLIKEICSAKHCDFWLERGAALRVAVDQPAMVCLLGFVWFIVK", "length": 179 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9SAC9-1", "protein_name": "AP-1 complex subunit mu-1", "gene_name": "AP1M1", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAGAASALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMFVQHSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYPQFTEARILSEFIKTDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPWVRYITMAGEYELRLM", "length": 428 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCN2-1", "protein_name": "Cytochrome P450 71B31", "gene_name": "CYP71B31", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAFSKLTTFFEDVIDELLKTKQLDDHSDLVTAMLDVINRPRKFGSLKITYDHLIAMMSDVVLAGVNAGTVTMIWTMTELTRHPRVMKKLQEEIRATLGPNKERITEEDLEKVEYLNLVIKESFRLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVPTLP", "length": 498 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJ39-1", "protein_name": "Cytochrome P450, family 705, subfamily A, polypeptide 6", "gene_name": "CYP705A6", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MAAILSVDFQNCFIFIVLCLFSLFCYSLFFKKPKHPRGCDLPPSPPSLPIIGHLHLLFSPLTHKSLQKLSSKYGHLLHLRIFNVPVILVSSASVAYEIFRAHDVNVSSRGVAAIDESLLFGSSGIITAPYGDYWKFMKKLIATKLLRPQSLESSRGIRGEELTRFYNSLLDKARMTESVEISTEAMKLVNNTLCRMSMGRSFSEENGEAEKIRGLVGESYALTKKMFLASLLRKPLKKLRISLFEKEIMGVSDRLDELLERILVEHEEKLHEEHQGTDMMDVLLAASGDENAEYNITRNHIKSFFVEIFIGATDTSVQTTQWTMAEILNHPNVLERLRKDIDSVVGKTRLIHETDLPNLPYLQAVVKEGLRLHPPGPLLVRTFQERCKIKGFYIPEKTTLVINAYAVMRDPDSWEDPDEFKPERFLRAPPMGGSLDKFIEFS", "length": 442 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMT4-1", "protein_name": "Large ribosomal subunit protein eL13y", "gene_name": "RPL13C", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK", "length": 206 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSB4-1", "protein_name": "26S proteasome regulatory subunit 7 homolog B", "gene_name": "RPT1B", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MIIRDIMEDPENEGPHNMRSDFEPLLSVLRLRDYETGDIIEFDSTEASEEALSDITEFGSTEASEAHFEEPYSARIKKVEKEINELAEKICNLGIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCTQIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAYYI", "length": 464 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVM4-1", "protein_name": "Serine hydroxymethyltransferase 5", "gene_name": "SHM5", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTTSTHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALAVALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKVEKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESRND", "length": 470 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SWH4-1", "protein_name": "Syntaxin-42", "gene_name": "SYP42", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSSYAPLNSYDPGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREVEMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLKRLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKLKEGQHVSAEREREIQQVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQKAERTQREGAMVKCATILLVLCLIMIVLLILKNILF", "length": 323 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYN6-1", "protein_name": "SOUL heme-binding family protein", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEAALSIFKLSFLLTLLSGGSDLIDSLPPNCNRAECPSYEVVHAGNGYEIHRYNTTVWISTEPIQDISLNEASGNGWNQLSDYMNGNNDYHQRIEIALPYITQVSQNLSTFIVSFFVPKAFQPDPPPGNNLHVQRWDSRYVAVKQISGYVADHKIGKQVAELKASLQGTVWAKAIEKSRETGGVGSAWAYTVAQFSWPFQWSQRVNEIWFPFEMEDEETVSIVTQ", "length": 225 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SZB4-1", "protein_name": "Putative DEAD-box ATP-dependent RNA helicase 43", "gene_name": "RH43", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MEVDDGYVEYVPVEERLAQMKRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV", "length": 542 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0E0-1", "protein_name": "Putative ATPase, plasma membrane-like", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MATGDSLEDIKIEIDDDLEKIPIEEVFKKLRCSREGLSGAEGKERLKIFGPNKLENKKKEHITLRFFALMFKPLSWVIQAAAIMAMLFANGDGRQLFLGIVCLLIVNTIICYLKEDDAANVVAMARAGLSPKTKVLRDGKWSEQEASILVPGDIVSIKPGDIIPCDARLLEGDTLKVDQSALTGEFGPITKGPGEEVFSGTTCKQGEMEAVVIATGVHTFSGTTAHLVDNRTNKVGHFRKVVTEIENLCVISIAIGISIEVIVMYWIQRRNFSDVINNLLVLVIGGIPLAMPTVLYVIMVTGSLRLYRTGTITQRITAIEDMAAIDVLCSDKTGTLTLNKLSVDKNLIKVYSKDVEKEQVLLLAARASRIENRDGIDAAMVGSLADPKEARAGIREVHFNLVDKRTALTYIDGNGDWHRVSKGTPEQILDLCNARDDLRKSVHSAIRNYAERGLKSFAISWFRNTNCNTVFFFPYQLCSEHKYHIVNKLQERHICGLIGDGVDDVPSLKKADVGIAVANATEAARAASDIVLTEPGLSVIIDAVLASRAILQQMKHYTIYAVSITIRVVFGFMFIALIWKFDFSPFMVLAIALLNEETTKAITMDNVTNPSPTPDSLKLKEIFATGVVYGSYMALITVVFFWAAYRTDIFPRTFHVRDLRGNEAEMMCALYLQVSIMSQALFFVIQSRSWFFVERPGELLFLSFVTVQTIATTLAVYASWETARIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKAQSLFDNMVHLVLNSYAKLSNGIYNHTQADHTYSLLEVSTPPSQDLRGVGWV", "length": 813 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T0H7-1", "protein_name": "Histone H2A.8", "gene_name": "", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MVCNTNILKDVSTKISAFENVRMIMVEGEMFQVARIHKQLKNRVSAHSSVGATDVVYMTSILEYLTTEVLQLAENTSKDLKVKRITPRHLQLAIRGDEELDTLIKGTIIGGSVIPHIH", "length": 118 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9VXF6-1", "protein_name": "Calnexin 14D", "gene_name": "Cnx14D", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAWKMLFAILLLLSAAKTGYLAPESENSVEDVQIEPGAIYGDEKFAYKSPVIDAEKFYFADHFDDVEASRKRWVLSQAKKNDIADEIAKYDGIWNWESPQRIFWANDLGLVLKSKAKHAAIAAPFRQPFDFKSNKPLVVQYELTLQEGQDCGGSYLKLLSAGKGTEQLNRFNDKTPYTIMFGPDKCGNNLKMHFIFRHVNPLNGNITEKHCKKPNARLGVPFTDKLPHLYQLVVRPDNSFEIRLDHKIIKEGSLLTDFVPPVNPPAEIDDPNDHKPESWDERKKIPDPNAHKPEDWDEDAPPHLPDTDAVMPNGWLEDEPDMIFDPTAIEPEDWNSEIDGEWEAPLVENPVCKKAPGCGKWKAPLIPNPNYKGKWSAPMIENPNNQGKWAPRKIANPDFFEDLKPFQMTPINAVGLELWSMSSDILFDNLIITDDVELARDFAANSFDIKRLYIDRESFGNKVVELARANRAIWGIVIVAIAVPVAITIFCKFGLGPSRVAAAKKAAAAAAKKTDDPQPDDDLGAEEEEKLEKGKKEEEKKEEEEEEEKEENKEEKKEEEKDDEKEMKDCEEEEDDEEKDDEEKTDERAAGDTNKESTPLSASPKKNQKSYLDNNEDEEDTLKNKEPTPKKRKRKALKE", "length": 639 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W240-1", "protein_name": "K Homology domain-containing protein", "gene_name": "cg3927", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "METPSELTEKQNQDQPTYQPRLNEVAQKFLADLDAERKRLSAEFPLCALLIDESVDRVYSTGRIPGKEPFADVYQQKPMKIIQKVFVPVNKFPKFNFTGKILGPKGNSLRRLQEETHCKIVIKGRNSMRDRNKEEELRSSGDPRYAHLHKDLFLEVSAVAPPAECYARIAYALAEIRKYLIPDDNDDVWHEQQRELMEMNPKSAKKSNGLNMAPYRSNFDKAIGAIRNRAPKYNNQIRRVTENPREVAYMEEVEYDYDEHLMFCSPVVRL", "length": 270 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W4G6-1", "protein_name": "Uncharacterized protein", "gene_name": "Dmel\\CG2861", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDYEIIEFVRRHISHIDISAETRMRYPDPISNNNFDWNSIGLGEQEDAIGQDQQSQALNENANNVSPDVPPSTIAEPTLEPSTIEGNQGQNPRIISSMPDMMPMANSFNPLININQEAGVVINTGINSIDNGLPSTYSEHISQPTNTESTRNMNSSIFDIPSDLDNNSSNESGDEVTQPTAKQSKINANFVCKIESDTNMDKLPTTSNNTNDKPPNNTDSDSDIISISDLIEDLNLDFNQLPITSCDVETHPADTQSNIDANLPYDLISAINMDFVNPANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPKKATSTITSSVQNFPNPNNWPACPFPMQNGTMPADEPNDLMPTVSQSLTVPAAQNRPIQTIGKIIKPPVKRTYTKRANKTNNTNIPNKNSTGVIQSNGVAPTIRQGLVEPGGTNILMPWNRQIPMVSVAENPRVQTIDKIIVPPPKRTYKKRVNKTVNTNQSSESAVGDGAPSAPIQSIPKVRKPRGPGKKTAKMVPGQESQQDIPLGVPPNGEAPQTSSQAPVPRVKRAYRKRANNTNNTNILNVNSTGVMESNGGGPTIPNSQQIPNVAVVLNLPIQPIKPKAPRKPRAKKVCNQQPGTDIPFGVSAQGQTAQIKPKPKPRAPRVPKEPKAPKEPKAPKVPKAPRVPKAPRVPKAPRVPKAPRVPKPPKEPKPPKEPKPPKQPKAPRVPKEPKPPKVPKEPKAPRAPRAPRVPKAPKEPKVPKIPKNPRVPKAPRQPKASMNKIQNTVKVPLPIEPVPLETPTYINPINTPVQSTVGEILALGSMPPISPIKFPVLFDEHAAQHTVANSNMPQSSLPTLDIPQLPTRNNKQPSTKSAEDTEILGLGKNKNAMKSDGRIKQGRVSKPSLRFSPSSSSLRPVVRSLSSSSSSSSSWSSCTTCSTCSSCSTCSSSSDSSQSSRSRNRKRRSPKVPIPHKLFESNGEINFQLGQPTRLESPSPPPPVPMQACGTFEEHLTDLTLVRVHAISPLRSPTYDFDFDLPEPMLSEESSSSSSESNDESNVNCQMAPNSQNVSMHFLKVMVFYNCYVLFQQLEKKHQSLFEESSSSSSSESNDETNVNCQMTPNSQNQKKLQSAPIREPSPDQPPEAASRSSNGGTIGPCNLKAFRRDFMISNAENTGFTNPSELNLKKCATKVCTPMERNSGSQLPIQNRFILPNSNKEEGKMNVEPVMPKHKPSRIPIRTKTPIALNLMKEPEDNARKPKNILKPFFSNADVNPCSSTDYEPNFKPCESPLPAKQNDFKLINKDKKSWVSHYQEQESQELKENSFFYAKFNLPNIPKKSFKDSKANAERRCTKTFEDVRKEAQQSRYTKAINKRQNKKAMLESALGNAITEDPTVNCNLADNPNDQVEMPRNPDIVEPTVKPVKFKAFVSASIKPKSSKKRKLMNSASNSKLFKFKIFESEVNKDENEEEDVIPDNLIIPVKRKQNISELLDMQPSTSKAAATITSQPKIAQLKRMPSKLLNEKMKSYAKKRSNDDENKDTKNTGMHMHRYKIPKLSANKPQNTSTTQSPTRGFSRLPGMYQEPNFQNAQHPFSTRGYYPYQRAYPLHRPTSQYHMNQPQPLRLHHSMYVDAEPSFESVFPAPRYQPYNINPSMRHHYSYPGEPSPSTYPMGGIPFQNNNTLYPPMRNDLCYPRGRLNYPVRNLPPMNSQGTYPPNYPQNFLPNYPPSRQFLLSMQRLADINKQIASGSIESVGGFIQMAYAGRKYRTLKDLRERTMLSKDSLRKIFKCMCKIKRPKWRISKFYLYAYWCEISGIPQSSEFGKPLELNAAYRKVISSYAENKFLRMESLMEKTGFGKSKLKRVLKMIGRKRSTKWRLLNYRKPLIHLHRSQDM", "length": 1893 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9W6A5-1", "protein_name": "Green-sensitive opsin-1", "gene_name": "opn1mw1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MNGTEGSNFYIPMSNRTGLVRSPYDYTQYYLAEPWKFKALAFYMFLLIIFGFPINVLTLVVTAQHKKLRQPLNYILVNLAFAGTIMVIFGFTVSFYCSLVGYMALGPLGCVMEGFFATLGGQVALWSLVVLAIERYIVVCKPMGSFKFSANHAMAGIAFTWFMACSCAVPPLFGWSRYLPEGMQTSCGPDYYTLNPEYNNESYVMYMFSCHFCIPVTTIFFTYGSLVCTVKAAAAQQQESESTQKAEREVTRMVILMVLGFLFAWVPYASFAAWIFFNRGAAFSAQAMAVPAFFSKTSAVFNPIIYVLLNKQFRSCMLNTLFCGKSPLGDDESSSVSTSKTEVSSVSPA", "length": 349 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q9XK79-1", "protein_name": "NADH-ubiquinone oxidoreductase chain 4L", "gene_name": "nad4L", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MNLIDLILIAIYVIGISGLIFNKNNIINILIISELNLGTLGMLFVLASVELNDILGELSGLYILTFTAAESAIGLAIVVILYSKTGIINIRHLNKLKG", "length": 98 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q9Y2B0-1", "protein_name": "Protein canopy homolog 2", "gene_name": "CNPY2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKGWGWLALLLGALLGTAWARRSQDLHCGACRALVDELEWEIAQVDPKKTIQMGSFRINPDGSQSVVEVPYARSEAHLTELLEEICDRMKEYGEQIDPSTHRKNYVRVVGRNGESSELDLQGIRIDSDISGTLKFACESIVEEYEDELIEFFSREADNVKDKLCSKRTDLCDHALHISHDEL", "length": 182 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9Z1X0-1", "protein_name": "C-C motif chemokine 27", "gene_name": "Ccl27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMEGLSPASSLPLLLLLLSPAPEAALPLPSSTSCCTQLYRQPLPSRLLRRIVHMELQEADGDCHLQAVVLHLARRSVCVHPQNRSLARWLERQGKRLQGTVPSLNLVLQKKMYSHPQQQN", "length": 120 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "S4R2L0-1", "protein_name": "Secretoglobin, family 2B, member 12", "gene_name": "Scgb2b12", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKGILLLLGLLITGELSFQTTEACVPFFEVYASVLSGSRVWLYHELQSFDATAEEKVALEKIQGCYREERLRNILLEPKIMEAMVASPECRSYYSLDNFRSILDFISNLLGE", "length": 112 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "W4VSP8-1", "protein_name": "Vomeronasal type-1 receptor", "gene_name": "Vmn1r10", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSSFKNVLYFQAGLGVLANMVLLLFYIFIILGHRPKPTDLISCQLTFVHIIMVLTGGDILLTDLFELLNIENDLKCKTIFYISRVMRGLSICTTCLLSVFQAVTISPNTSLMAKFKQKLKKYMACVFLCIWSFNLAFSTNRIFYVGGFTNVSETNQMQVTKSCSLLPMNIIIRGFIFTISTSRDVFLVGVMLTTSVYMVITMFRYHRQCKYLYSISHLRESPEKRATQTIVLLVSFFVVMYWVDFIISFTSDMIWMYDPLILTVQKFMMYAYPTITPLVQISSDNRIIIMLKNLQSKHQQRFFNKDIFFSL", "length": 311 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "X1WF74-1", "protein_name": "Uncharacterized protein LOC100334758 precursor", "gene_name": "si:dkey-52p2.5", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MARTSENMIGKVLFVLFLLSGPTSVLTDFHSLQILGTYIKGDTLFPQISFTFMLDDLTVGLYITERDEFIPRDNTTNEDETVSDMLDKIKNELQPLLKGTLIFQNSTESPQLFQIAWHCELLDNNKTGQMILKIAFSGSTTDEVSFYGNNFTCQCQNNMATVPLEYFQMQFKSIYYPVCMTTLGGYLVKRQVQVNRKVQPKVRLIKKVHPKSGGFRLSCLASEFYPYFINLTLLRDGQPVSDHEVTGGDLLPNGDGTYQMRKSLEIRADEREKHKYTCSAKHLDKNLDVDFEFDPSYPVKIVIPVVVLLSLVLVLTAVLIHKCMNKQAASPPEQQEPIEMGGRLRK", "length": 346 }, "evidence": [ { "id": "I3L8Z8", "url": "https://omabrowser.org/oma/group/I3L8Z8/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" }, { "start_pos": 70, "end_pos": 72, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L8Z8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 799, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L8Z8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L8Z8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L8Z8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L8Z8" }, { "id": "PF14914", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14914" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LRRC37A/B like protein 1 C-terminal", "eco_id": "ECO_0000259", "start_pos": 550, "end_pos": 692, "start_aa": "Ser", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 498 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 43, "end_pos": 45 }, { "start_pos": 70, "end_pos": 72 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L912-1", "uniprot_ac": "I3L912", "uniprot_id": "I3L912_PIG", "mass": { "chemical_mass": 139624.0, "monoisotopic_mass": 139624.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "SPATA31 domain-containing protein", "type": "recommended", "evidence": [ { "id": "I3L912", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L912/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L912", "url": "https://www.uniprot.org/uniprotkb/I3L912" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3L912", "locus": {} } ], "crossref": [ { "id": "I3L912", "url": "https://alphafold.ebi.ac.uk/entry/I3L912", "database": "AlphaFoldDB", "categories": [] }, { "id": "IPR039509", "url": "https://www.ebi.ac.uk/interpro/entry/IPR039509", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR21859", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21859", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21859:SF15", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21859:SF15", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF14650", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF14650", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3L912", "url": "https://www.uniprot.org/uniprotkb/I3L912", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L912-1", "url": "https://www.uniprot.org/uniprotkb/I3L912-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVGENTLTSPISRRPPQGSSCLEVLSASNVSFEQSLEHHSPHSKDLSLPSATLTVSQKSLIQSAARSASTVSIHDYDYCAEHLKKRQGFQVPDVPRVPETMFSSRPEEPRVSVNLQEMIQSNLNLVYGNQGQQPLNSQVSLLTLNREITTLTHPVALHMVTVLPAHLPFLSPEVLRLLEVHVKKLMHFQRWGLPRRVEESLRQLMPNPPLFYQPIHNQPVSFIQNDTSQLSVEKFGTISYQNWGSCMAGQPTQAFWVSEWSILDPEQRYYYQQIPNHMALALSSPSLKELSGLYLMSRQQANDSVGHVQPKYSQLFCGLPSLHSESLVDTFLDSQGLSMNETMSKSPLKDPFLFKELSLFPLLPKTPHQSAPLSSLSSQNWILPSDHQQSQINVPFLTLDECEALEWHLLQRQIQLQWNLPGVFQRDQRTQSPVQYKPCDKAQSSETVKTSCPGQPSSDLTKELLFPQHARRLLEFHLQRQLIHHRWGLPQKIQQSMQLLLPPANQQTVSWRSSALGSVNVPQPASLEATGADDPFSPTLDLVSDPMPHLFDQAKAVLQSHIDSKCRQIDQGNVPSCVYSSWECIIPGHLKKTSFTCIPESKSLELQAATDLDLEQKFITWMPVALDHQQQASPDAVIEHSKLPLALSKGTIEKLETTLRHKYLAFLSGLPALYYVALSRAMAPAVTSQAVITEMVPEPVELPAEPLIQVTSPEEQGLSSGPGFQDASEACADIADESQAEVQVDGTTETVPIESQTEPARLYSLGEPILAKLNFHVRKKILEIQLGIPIKARESREQTVAIPENICTQESLGSLNNQGKTLLQELPIPPDMPCAPDPEWLHFKEQLATELKAVHQKHKQLSSSLVPHDAVHWASKISQPSGDMTESQVLCVQLEASVSSPSLEEPWSPEPQSPDKKKDSAHSPTLAEKIEEKGKPKLSGDHGEGDAGFSLSSTREKSQSAEAQRPERMLLNRTPCSPWRRRHCIHLDAPCQPSPQHHPQLKLPELSPRDPGGKGSEKNDRQDNQTKLNGILKPAKVYKNAQPKVPQVSQGQPFLGQLILDKPLQGQTLQGHILQRQMMPGHTHKRPSLPESGLRNKMKSFLHRINPKTKGKGNEESMPSTSKKVPNTRKENMEKNLAPAKSPKGRTKAEKTRGGPKPQFPPTEKQVGLAFLDVSHYPDHKLWHHSHSHQLYSASVLGIPRHCPRHCPRVARATQPGNPPNTQLSPQRETLACSRRPSAVRRLCSLSNICIP", "length": 1252, "header": "tr|I3L912-1|I3L912_PIG Isoform 1 of SPATA31 domain-containing protein OS=Sus scrofa OX=9823 GN= PE=3 SV=3 CANONICAL=I3L912-1" }, "isoforms": [ { "isoform_ac": "I3L912-1", "url": "https://www.uniprot.org/uniprotkb/I3L912/entry#I3L912-1", "sequence": { "sequence": "MVGENTLTSPISRRPPQGSSCLEVLSASNVSFEQSLEHHSPHSKDLSLPSATLTVSQKSLIQSAARSASTVSIHDYDYCAEHLKKRQGFQVPDVPRVPETMFSSRPEEPRVSVNLQEMIQSNLNLVYGNQGQQPLNSQVSLLTLNREITTLTHPVALHMVTVLPAHLPFLSPEVLRLLEVHVKKLMHFQRWGLPRRVEESLRQLMPNPPLFYQPIHNQPVSFIQNDTSQLSVEKFGTISYQNWGSCMAGQPTQAFWVSEWSILDPEQRYYYQQIPNHMALALSSPSLKELSGLYLMSRQQANDSVGHVQPKYSQLFCGLPSLHSESLVDTFLDSQGLSMNETMSKSPLKDPFLFKELSLFPLLPKTPHQSAPLSSLSSQNWILPSDHQQSQINVPFLTLDECEALEWHLLQRQIQLQWNLPGVFQRDQRTQSPVQYKPCDKAQSSETVKTSCPGQPSSDLTKELLFPQHARRLLEFHLQRQLIHHRWGLPQKIQQSMQLLLPPANQQTVSWRSSALGSVNVPQPASLEATGADDPFSPTLDLVSDPMPHLFDQAKAVLQSHIDSKCRQIDQGNVPSCVYSSWECIIPGHLKKTSFTCIPESKSLELQAATDLDLEQKFITWMPVALDHQQQASPDAVIEHSKLPLALSKGTIEKLETTLRHKYLAFLSGLPALYYVALSRAMAPAVTSQAVITEMVPEPVELPAEPLIQVTSPEEQGLSSGPGFQDASEACADIADESQAEVQVDGTTETVPIESQTEPARLYSLGEPILAKLNFHVRKKILEIQLGIPIKARESREQTVAIPENICTQESLGSLNNQGKTLLQELPIPPDMPCAPDPEWLHFKEQLATELKAVHQKHKQLSSSLVPHDAVHWASKISQPSGDMTESQVLCVQLEASVSSPSLEEPWSPEPQSPDKKKDSAHSPTLAEKIEEKGKPKLSGDHGEGDAGFSLSSTREKSQSAEAQRPERMLLNRTPCSPWRRRHCIHLDAPCQPSPQHHPQLKLPELSPRDPGGKGSEKNDRQDNQTKLNGILKPAKVYKNAQPKVPQVSQGQPFLGQLILDKPLQGQTLQGHILQRQMMPGHTHKRPSLPESGLRNKMKSFLHRINPKTKGKGNEESMPSTSKKVPNTRKENMEKNLAPAKSPKGRTKAEKTRGGPKPQFPPTEKQVGLAFLDVSHYPDHKLWHHSHSHQLYSASVLGIPRHCPRHCPRVARATQPGNPPNTQLSPQRETLACSRRPSAVRRLCSLSNICIP", 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"length": 1203, "header": "tr|I3L986-1|I3L986_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=1 SV=2 CANONICAL=I3L986-1" }, "isoforms": [ { "isoform_ac": "I3L986-1", "url": "https://www.uniprot.org/uniprotkb/I3L986/entry#I3L986-1", "sequence": { "sequence": 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"length": 1203, "header": "tr|I3L986-1|I3L986_PIG Isoform 1 of Uncharacterized protein OS=Sus scrofa OX=9823 GN= PE=1 SV=2 CANONICAL=I3L986-1" }, "locus": { "chromosome": "14", "start_pos": 13833934, "end_pos": 13830326, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024445.3", "url": "https://www.ensembl.org/id/ENSSSCT00000024445.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020598.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020598.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 478, "start_aa": "Thr", "end_pos": 478, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr478", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 755, "start_aa": "Thr", "end_pos": 755, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr755", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L986", "url": "https://www.uniprot.org/uniprotkb/I3L986" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8M2BH38-1", "protein_name": "Retinitis pigmentosa 1-like 1 protein", "gene_name": "rp1l1a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MQRTAQGFFDADPHFHNEPYQFPHPPTSSFGSIVTASSPVKRITFYKSGDSQFKGVKMAVHKRTFKCFDALLDDLSQKVPLPFGVRTITTPRGTHSIKHLEQFEDGGCYLCSDRRYVKPINMEEVGKRQAVWHHHSHPNNTRRKPSRPDEPLSGHQHHHHRHPKRIILVKNSDPAVRRSIILSRRTARSLRVFTEEISELMQCHVKRLYTLEGRKIDSIQSLMQCPSVLVCVGREPFRPLLVESLKKLSDEKLPGVGTRSHSSVCSEGHESKKNVNFGLETKKSIIHPRSDSSNRSTRFSLSSEKSYQNGLCTTPGQSGCVSTCPYVKEVVMNDDIEKRVLVNKDGSLSVEMKVRFRLFNDETLQWSTEIKKSSMKVNESVKDTEYLQAKAEYSDPDSVCASEAEEAFATKKHLEETLCQNCCNHCQEYDIWKNPMHKEQGASKSPSSSGSSQKITCKKSSVDSTRTISRSSGEYVEHVVEKASCFQETMEEGDTRVEYCSTSHCCSRSEVSSAGVTSKSKKSYEDGCGSQAKNKCSHTDITEAEISPTPHCELIKITGERPISAVSNSSKVLESLKEDQDDDYDDLPPSVSRASNWSQSCHPESDYQPKCARCRGLQSSPQSYLSPRPPSKESSTAIHSLKVKKHKTSFAAPVDGECMSTTSPVSKVSPMCNACQCGAISSVASGQEQLFEKGACRIISRQSQASCTSRGQANTPRSNASDALEKCDDAGKTSVTSGVPKRSGQSGGCSCCGKSKGFNGNVEEDEPEKADSILSKKSVACTSNVLEISDPVNNASDGEATRERSRSKISNASSTSKISKKSNCSAHERCSAGRSLKSERNEGESVKERTKSAMSAKSDCIISQRDPTPALVLTETDNAEEESQERAVSPMSAHSNLSAASKTSYKSISGHSEKAKTPRMCSPNDVEEVPLKLINSQGDEPESAASPNPTLSDNHNEQDTELPHEVRSASAMSNKSNQSSQHPSKDSKRSVKSCELQGKSPDVLCELKTEERQCRPLSNCSKTSVKSNESSKHSQAEAKSQERVPSAMSAKTNASKRSCRSCRANHNIPETTVTSVLNDATPDECATPTNKSKRATSPMSQTSEKSNACSERSIKSETQKTTLNALTVTSPLPRKKQSPSPRSTHNSKSKKTDSRAASGMSENSNVSRRSGKCNCLGSSNGDLKEKLKEDAKDVSGFPDKIPSDSTLINNIKSSDNQFDEPVSPTSTASVSLGLGEDQKGDDFDDLSTSGMSEDGGNRLHEVNGVDAEERPKTEASVNSHHKSPVQALLPVSAESVMSAELKKSKSGSQLNENNIRVPSTLSLSSSRSKSPSRLSPGSAKNTAMKERDCKAVNNTNHAERSEASSKHEQSERAAGKVTPASEFLDSSKASECSVKSKNGQSIRETDKRSKHSSHCLEMNGLDINSNRDLDDGMVKSLKASTSDKRSVKNDASRPNSAGKSDISQSLPLEMPNKKKASVKHPDSSSESVLSRALSAADLLREIVGSARPVSRGSKSVASSKNVDKVENKSQKSSRSKPSHSSEHNTKELMPSCLPNASPTEVVNDWLRNIPIGGYVYEMDVEHTEREAGENASQRDKSEAPESIMEVEEPNENPTGENHVQQETNDVEIQACDEKAQLEMCEMDHNPKTLANQDSLQKQCDSSVQVMKVLLGPKLDRSSSLPEVSPVYGRKLSQSAQGLLDCLANLRLIDSDSKDEKHRKYNEVMMILQSLWLQKPIEDEHIKQNAKVNQSEDEFNLRYSSGVDVNSGSTSSFKGEKIETSQGTIPPIEKQEISRNDKDDEEDEVKFTECLDSSKIIPDPVTPDIAERTQGSPVNTRQDDDQENDVTQEDVSSSENKNESDQTPQTTSYKSSGNESYTMKSPENTSSGTPPSVQKATLTKRVSQDPDPVWVLSLLKKLEKQFMLHYTDAMAEFKVRWDLDDNEMLNTMISELKEEVHKRIQSSINRELQKIQSRTGRGPRPPGNALSRESTAQTEQRRKRLRVMRNKSILTRSDEDYTASGTENSDQRSDDEYCPCDACIKKKLASRAAQRAQALSFAPVIMEFDLRKILQMKKDPVEPSQSKPEEQCTACQVENNLEVVHEEVEEVNDDTRGRDVKMADQEETDDADNAIDATLDSEKKDQNDEEANDKSDDVDDGQNEKEAEPAKEEMGVNDTGDDENEEEGNLVEEDMEKEACTEHAPNIENSDSTAQKMTESAEETEAVDKQTTEDQSTEEVEESNKDDTPETTKGETPTIEKNADGTSDTGQDDETGKMPKVKIEMEVRESVEHEDKSSSVEEQNETDDALAKQATKTSTESQQGSMENCTAQAKLKDLQSFMESLESHGDSVVITKQPPYKEPHEAANQKDMCNGLTEWQVSPKMNIRANKQKNQKNGH", "length": 2394 }, "evidence": [ { "id": "I3L986", "url": "https://omabrowser.org/oma/group/I3L986/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "M0R410-1", "protein_name": "RP1 like 1", "gene_name": "Rp1l1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNSTPGDTRDAPAPSHPAPSHRQCLLPSVAHTPSVTEVTPAKKITFLKRGDPQFAGVRLAVHQRTFKTFSALMDELSQRMPLSFGVRSVTTPRGLHGLSALEQLQDGGCYLCSDRKPPKTPRESGRLQRKSPPAGRSQVSQGGHEAPETSSYSWKNPMAPRRLTLVKNGYPGCQQTVVLSHKNTRNLAGFLSKASELLRFPVKQVYTTHGKKVDSLQTLLDGPSLLVCAGNEAFRRLEMENDRGNRTRMVSGVTARSERGCWGPNAKQSVIHSRGRSGGKLRQFSLMSERSGLSDHPASGHQAWAGPALDRCPQDTPAPPGSLVAADDVEKKVCMNEDGSLSVEMKVRFQLLGEDTLRWSQRVGHASVFTAATGEDRDLREADRLCCRQEGYPWGVLEPGAQGLGPHDGGCQGAFDVGQQSRPSYDIWRNPLTAPEGTGPTPRRRWGLAKLSRCWREGTNDRKGHDKANASPVSTPRHPGSVQPGSCCLWTPEVETGSDTLRPVSSASSRSETDLESGEDPCLEDTGPCGLRLQTQSIDRALSDTSASAESREESCEGGGQLHRGSSQARVMASQGQATRGDNPCISTQRHLSLNHTGLQTKKDRQSASCQEVRGDPVLRLPLVPRHSGSRDTQRDALPAPACAPAQRRQRKQKRPAGVVCLPSVSIPHQVAQKGHARQCHCCRDTQSSGDTALQMTMPMEREQACPGSPAPQFPSNSPRAGNQAPECLRPPFSSSLDFQEPQATSIAMSDSDCMSSFCHPSTRSAEPAEDSKCQAPSSTPTPIHRGEVGYLWDKAGSTPEPFSSSVLLNRWPEADLRTYQNFGCLQVAPTSTLATPSSQTQASISEACLGDNSSCPTPPQDQICSRREPASSNSTHSDHGRADGYTGPRRTLPGMPLGIRGSLEEQEGDGGVTPSALPYTSPDAVVREWLGNIPEKPALMTYEVADETIEVPSEGPEGPKEDLGDGCSLKVFGELTQARQQMLEGVTDEHPEPAGVPAGPGSVCCKLGGDMHSDATSVERLKAPAEAGTGEGTTVERGVSLCALPTRVSASTQIMKALLGSKPGRPSSLPEVSSTVAQRLSCSAGALIACLAKLHFFDEDLGPLDGKRRLEESPKYQEMLNISQTLWPGSELGQGQLDFSLRRLTSHQALLGTEDFTPTSSSGVDVSSGSGGSGEGSVPCVMDSTLASKKIDLPLKIPSQRPDSRNQGYPEIVSPSTVSSGSQMRACTTSGEEAGKGGRKQTWGSAPEQSVENKVPEGDAQLEETEGRARERLQENSVLGEGLPEEGTRVCSQGMLAANSRDGAGSPEDTRVPNDEVGTDGGLWPLDGREDPTESPCHFEESNSRVSERQSAHVPELGLDVRGGKQACVKASSETRETNTSIAHRGTLDPDPIWVSKLLKKIEKAFMAHLTDATAELRARWNLHDNNLLDQMVTELEQDVGQRLQASTVREVRKIQSRAGRMFPEPPREALRGQSSLQTEQRRRRLQGLRNLSAFPGQGPLSFTLEDGATLGTALGTRSGAGLVEDEFCPCEICLKKKRTPRFPKDSTTVSGAPVRKAFDLQQILQSKKDGSSNREAMEVSPQKTGMMLSQEDPRTVQGADEKQELRLAQGLGVAEGEEGEGKQRMRAEEDTEFSKAEGDGCHAPKEDATTKEDGKICIGTAQDGQQLEGTEIGKEETLHQSFRDGDTSEAPARQGGHSVESQEASREGQPEVEGRNPDEKEESSWVSSEESQGRVGSENNSLDQEGRLQDHHQRPGPQSHHAARSSRAMSLDNCSQVSQKGSDRDFPSGDLKYNKAKNSGVLPAERKVPMMYPESSSSEQEAPSSPRPPKQEKGEDGRSACTQVGGRVDGFGQDDLDF", "length": 1860 }, "evidence": [ { "id": "I3L986", "url": "https://omabrowser.org/oma/group/I3L986/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8CGM2-1", "protein_name": "Retinitis pigmentosa 1-like 1 protein", "gene_name": "Rp1l1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNSTPGDTRDAPAPSHPAPSHRQCLLPSVAHTPSVTEVTPAKKITFLKRGDPQFAGVRLAVHQRTFKTFSSLMDELSQRMPLSFGVRSVTTPRGLHGLSALEQLQDGGCYLCSDRKPPKTSREPGRLQRKSPSAGQAQVFQGGHEAPETSYSWKGPVAPRRLTLVKNGDPRRQQTVVLSHKNTRSLAAFLGKASELLRFPVKQVYTTRGKKVDSLQTLLDGPSVLVCAGNEAFRCLEMENDRGNRTRKLSSVTARSERGCWGPNAKQSVIHSRGRSGGKLRQVSLTSERSGLSDHPASGHRAWAGPALDRCPQDMPVPPGSLVAADDVEKKVCMNEDGSLSVEMKVRFQLLGEDTLRWSQRVGQASVFTAASGKGQDPREADRFCCRQEGYPWGILKPGAQGLGSYDGGCQEAFDVGQKSQPSYDIWRNPLATPEGTGPTPRRRWGLAKLSGCKSHWRQEANHRKGHDKDNLSRVSTPRHPRSVQPGSCCPWTPDGDTGSDTLHPVSSASSHNETDLESGEGLCLEDTGPHGSRPETQSTERALSDTSVSAKSREESSEGGGQLHRSSSQARVMASREQVTKGDNPCISTQSHLPLNHMGLQTEKYRQGTRGWEVSGEPELRLALVPGHSGSQDTQRDALPAPACAPAQWRQRKQKRPASVECLPSVSVPYQVAQKGHARQDHYYRDTQSSLDTALQMPMPQEREQACPGSPAPQSPSNSPSAGNQASEDLRSPFSSSLDLQEPQATSKATTIAVSGSDCVCHSTRSVEPAGDTKCQAHSSTPTPAHRGELGCLWDKAGTTPEPFSFSVLLDRCPEADDPRTYHDCCCLQAVPSSPLAAPSGQTQTSISEACLGGSSFCPTPPKEQTCFGRESASNGSTSSGHSRADGFAGPRRTLLVKSPGVRGSLEEREADGGVTPSALPYASPDAVVREWLGNIPEKPVLMTYEMADENTEVPSDGPEGPKEDSLKVLGEPSQAKQQPPEGATNEHPEPAGVLSGPGSVCCRLGGDLHPDATSGERLKAPAEAGIGEGARVDHGVSLCALPTKVAASTQIMKALLGSKPGRPSSLPEVSSTVAQRLSSSAGAFIACLARLHFFDESLGPLDGKVRLEESPKYQEMLRLFQTLWPGSELWQGQLDFSLRKLTSHQALLGTEDFTPTSSSGVDVSSGSGGSGESSVPCVMDNTLAPEKRDLPLKIPSQRPDSRNQGYPELVGHSTVSSVSQVRACATGGEETGKGGRKQTWGNAPEQSVHSTMLEGDALSEETEGRVRERLQENSVHGKGLPEEGVRVCSQEMLAAGSQDGAGSPEDTRVPTDEAGADAASGGLWPLDGREEPTESPQHFSESNSRVREHQSAHKLELGLEEVSRLDARGCKQACIKASSGTMAHKGSLDPDPIWVSKLLKKIEKAFMAHLADATAELRARWDLHDNHLLDQMVTELEQDVGRRLQASTVMEVRKIQSRAGRMVPEPPREALRGQASLQTEQRRRRLQGLRNFSAVPGQGPLSLTLEDGPTLKTALGTKSGAEPAEDEFCPCEICLKKKRTPRFPKDAATVSGAPVRKAFDLQQILQSKKGGSSNREAMEVAPQRTGRMLSQEDLGTVQGADEKQGLGVAEGEEGEGKQRLRAEEDPEILKTEGSGCCAPEEDEATEEDGEICIGTAQESQQLEGTEMGKEGTLPQSFRDGGTLEAPARQGTHSVEIQEASRERQQEVEGRHQDVKEDSPWVSSGESQGRVGSENTSLDQEGRLLNHHQRPGPQSHHTACSSRALSLDNSSQVSQKGSDGDLTSGDLKCTKAKNSRVLHAEKKVPVMYPERSSSEQEVPSSPRLPKQGKGEDEGSAGSLACTQVGGKVDGFGQDDLDF", "length": 1859 }, "evidence": [ { "id": "I3L986", "url": "https://omabrowser.org/oma/group/I3L986/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IWN7-1", "protein_name": "Retinitis pigmentosa 1-like 1 protein", "gene_name": "RP1L1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MNSTPRNAQAPSHRECFLPSVARTPSVTKVTPAKKITFLKRGDPRFAGVRLAVHQRAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLSALEQLEDGGCYLCSDKKPPKTPSGPGRPQERNPTAQQLRDVEGQREAPGTSSSRKSLKTPRRILLIKNMDPRLQQTVVLSHRNTRNLAAFLGKASDLLRFPVKQLYTTSGKKVDSLQALLHSPSVLVCAGHEAFRTPAMKNARRSEAETLSGLTSRNKNGSWGPKTKPSVIHSRSPPGSTPRLPERPGPSNPPVGPAPGRHPQDTPAQSGPLVAGDDMKKKVRMNEDGSLSVEMKVRFHLVGEDTLLWSRRMGRASALTAASGEDPVLGEVDPLCCVWEGYPWGFSEPGVWGPRPCRVGCREVFGRGGQPGPKYEIWTNPLHASQGERVAARKRWGLAQHVRCSGLWGHGTAGRERCSQDSASPASSTGLPEGSEPESSCCPRTPEDGVDSASPSAQIGAERKAGGSLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETSQQEASEGGDPASPALSLSSLRSDDLQAETQGQGTEQATGAAVTREPLVLGLSCSWDSEGASSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSSGSLPSQDLLGTSSATVTPAVHSDFVSGVSPHNAPSAGWAGDAGSRTCSPAPIPPHTSDSCSKSGAASLGEEARDTPQPSSPLVLQVGRPEQGAVGPHRSHCCSQPGTQPAQEAQRGPSPEASWLCGRYCPTPPRGRPCPQRRSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRGLSEEKTLRSGGGPQGQEEASGVSPSSLPRSSPEAVVREWLDNIPEEPILMTYELADETTGAAGGGLRGPEVDPGDDHSLEGLGEPAQAGQQSLEGDPGQDPEPEGALLGSSDTGPQSGEGVPQGAAPEGVSEAPAEAGADREAPAGCRVSLRALPGRVSASTQIMRALMGSKQGRPSSVPEVSRPMARRLSCSAGALITCLASLQLFEEDLGSPASKVRFKDSPRYQELLSISKDLWPGCDVGEDQLDSGLWELTWSQALPDLGSHAMTENFTPTSSSGVDISSGSGGSGESSVPCAMDGTLVTQGTELPLKTSNQRPDSRTYESPGDLENQQQCCFPTFLNARACACATNEDEAERDSEEQRASSNLEQLAENTVQEEVQLEETKEGTEGEGLQEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGLQGEALEEGLKEEGLPEEGSVHGQELSEASSPDGKGSQEDDPVQEEEAGRASASAEPCPAEGTEEPTEPPSHLSETDPSASERQSGSQLEPGLEKPPGATMMGQEHTQAQPTQGAAERSSSVACSAALDCDPIWVSVLLKKTEKAFLAHLASAVAELRARWGLQDNDLLDQMAAELQQDVAQRLQDSTKRELQKLQGRAGRMVLEPPREALTGELLLQTQQRRHRLRGLRNLSAFSERTLGLGPLSFTLEDEPALSTALGSQLGEEAEGEEFCPCEACVRKKVSPMSPKATMGATRGPIKEAFDLQQILQRKRGEHTDGEAAEVAPGKTHTDPTSTRTVQGAEGGLGPGLSQGPGVDEGEDGEGSQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGGDTPHQRPGSQTGPSSSRASSWGNCWQKDSENDHVLGDTRSPDAKSTGTPHAERKATRMYPESSTSEQEEAPLGSRTPEQGASEGYDLQEDQALGSLAPTEAVGRADGFGQDDLDF", "length": 2400 }, "evidence": [ { "id": "I3L986", "url": "https://omabrowser.org/oma/group/I3L986/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 185, "end_pos": 187, "annotation": "n_glycosylation_sequon" }, { "start_pos": 481, "end_pos": 483, "annotation": "n_glycosylation_sequon" }, { "start_pos": 947, "end_pos": 949, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L986-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1203, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L986-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L986" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 478, 755 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 185, "end_pos": 187 }, { "start_pos": 481, "end_pos": 483 }, { "start_pos": 947, "end_pos": 949 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 2 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 2 }, { "field": "exact_o_linked_sites", "count": 2 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L989-1", "uniprot_ac": "I3L989", "uniprot_id": "I3L989_PIG", "mass": { "chemical_mass": 47584.0, "monoisotopic_mass": 47584.0 }, "refseq": { "ac": "XP_003481184", "name": "probable G-protein coupled receptor 45", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481184" }, "gene_names": [ { "name": "GPR45", "type": "recommended", "evidence": [ { "id": "I3L989", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L989" } ] }, { "name": "GPR45", "type": "synonym", "evidence": [ { "id": "XP_003481184", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481184" } ] } ], "protein_names": [ { "name": "G protein-coupled receptor 45", "type": "synonym", "evidence": [ { "id": "I3L989", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L989/entry#names_and_taxonomy" } ] }, { "name": "probable G-protein coupled receptor 45", "type": "synonym", 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"https://www.ensembl.org/id/ENSSSCP00000068378.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 49, "start_aa": "Thr", "end_pos": 49, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr49", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L989", "url": "https://www.uniprot.org/uniprotkb/I3L989" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100736943", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100736943", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "B0S7I8-1", "protein_name": "Probable G-protein coupled receptor 45", "gene_name": "gpr45", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": 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"https://www.ncbi.nlm.nih.gov/protein/NP_001231880" }, "gene_names": [ { "name": "LRRC59", "type": "recommended", "evidence": [ { "id": "I3L995", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L995" } ] }, { "name": "LRRC59", "type": "synonym", "evidence": [ { "id": "NP_001231880", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231880" } ] } ], "protein_names": [ { "name": "Leucine-rich repeat-containing protein 59", "type": "recommended", "evidence": [ { "id": "I3L995", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L995/entry#names_and_taxonomy" } ] }, { "name": "leucine-rich repeat-containing protein 59", "type": "synonym", "evidence": [ { "id": "NP_001231880", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231880" } ] } ], "function": [ { "annotation": "Required for nuclear import of FGF1, but not that of FGF2. Might regulate nuclear import of exogenous FGF1 by facilitating interaction with the nuclear import machinery and by transporting cytosolic FGF1 to, and possibly through, the nuclear pores.", "evidence": [ { "database": "UniProtKB", "id": "I3L995", "url": "https://www.uniprot.org/uniprotkb/I3L995#function" }, { "database": "UniProtKB", "id": "ARBA00053857", "url": "https://www.uniprot.org/uniprotkb/ARBA00053857#function" }, { "database": "UniProtKB", "id": "A0A8W4FNV5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNV5#function" }, { "database": "UniProtKB", "id": "A0A8W4FEN3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L995", "url": "https://www.uniprot.org/uniprotkb/I3L995" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LRRC59", "url": "https://www.uniprot.org/uniprotkb/I3L995", "locus": { "chromosome": "12", "start_pos": 26677226, "end_pos": 26694279, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028019", "url": "https://www.ensembl.org/id/ENSSSCG00000028019" } ] } } ], "crossref": [ { "id": "ENSSSCG00000028019", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028019", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514317", "url": "https://www.ncbi.nlm.nih.gov/gene/100514317", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001611", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001611", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR003591", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003591", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR032675", "url": "https://www.ebi.ac.uk/interpro/entry/IPR032675", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050216", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050216", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050715", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050715", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514317", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514317", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "CASVNTI", "url": "https://omabrowser.org/oma/group/CASVNTI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L995", "url": "https://www.orthodb.org/?gene=I3L995", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45752", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45752", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45752:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45752:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48051", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48051", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48051:SF42", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48051:SF42", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00560", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00560", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13855", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13855", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231880", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231880", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A8W4FEN3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FEN3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FEN3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGX0", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FGX0-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FGX0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNV5", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNV5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNV5-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNV5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L995", "url": "https://www.uniprot.org/uniprotkb/I3L995", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L995-1", "url": "https://www.uniprot.org/uniprotkb/I3L995-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALSKATILDLSCNKLTTLPSEFCGLTHLVKLDLSKNKLRQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKSLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEIDREAEKKWEAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPKKETNQAPKSKSGSRPRKPPPRKHTRSWAVLKLLLLLLLCVAGGLVACRVTELQQQPLCTSVNTIYDNAVRGLRSHDIVQWVLQTDSQQ", "length": 306, "header": "tr|I3L995-1|I3L995_PIG Isoform 1 of Leucine-rich repeat-containing protein 59 OS=Sus scrofa OX=9823 GN=LRRC59 PE=1 SV=4 CANONICAL=I3L995-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FEN3-1", "url": "https://www.uniprot.org/uniprotkb/I3L995/entry#A0A8W4FEN3-1", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALSKATILDLSCNKLTTLPSEFCGLTHLVKLDLSKNKLRQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKSLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEIDREAEKKWEAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPKKETNQAPKSKSGSRPRKPPPRKHTRSWAVLKLLLLLLLCVAGGLVACRVTELQQQPLCTSVNTIYDNAVRGLRSHDIVQSCSGTEWAPAFQH", "length": 310, "header": "tr|A0A8W4FEN3-1|A0A8W4FEN3_PIG Computationally mapped isoform of Leucine-rich repeat-containing protein 59 OS=Sus scrofa OX=9823 GN=LRRC59 PE=1 SV=1 CANONICAL=I3L995-1" }, "locus": { "chromosome": "12", "start_pos": 26694060, "end_pos": 26678595, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000105526.1", "url": "https://www.ensembl.org/id/ENSSSCT00000105526.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076770.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076770.1" } ] } }, { "isoform_ac": "A0A8W4FGX0-1", "url": "https://www.uniprot.org/uniprotkb/I3L995/entry#A0A8W4FGX0-1", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELFCGLTHLVKLDLSKNKLRQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKSLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEIDREAEKKWEAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPKKETNQAPKSKSGSRPRKPPPRKHTRSWAVLKLLLLLLLCVAGGLVACRVTELQQQPLCTSVNTIYDNAVRGLRSHDIVQWVLQTDSQQ", "length": 284, "header": "tr|A0A8W4FGX0-1|A0A8W4FGX0_PIG Computationally mapped isoform of Leucine rich repeat containing 59 OS=Sus scrofa OX=9823 GN=LRRC59 PE=1 SV=1 CANONICAL=I3L995-1" }, "locus": { "chromosome": "12", "start_pos": 26694060, "end_pos": 26679952, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095741.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095741.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078480.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078480.1" } ] } }, { "isoform_ac": "A0A8W4FNV5-1", "url": "https://www.uniprot.org/uniprotkb/I3L995/entry#A0A8W4FNV5-1", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALSKATILDLSCNKLTTLPSEFCGLTHLVKLDLSKNKLRQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKSLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEIDREAEKKWEAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPKKETNQAPKSKSGSRPRKPPPRKHTRSWALQQQPLCTSVNTIYDNAVRGLRSHDIVQWVLQTDSQQ", "length": 283, "header": "tr|A0A8W4FNV5-1|A0A8W4FNV5_PIG Computationally mapped isoform of Leucine-rich repeat-containing protein 59 OS=Sus scrofa OX=9823 GN=LRRC59 PE=1 SV=1 CANONICAL=I3L995-1" }, "locus": { "chromosome": "12", "start_pos": 26694060, "end_pos": 26679952, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000098629.1", "url": "https://www.ensembl.org/id/ENSSSCT00000098629.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081177.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081177.1" } ] } }, { "isoform_ac": "I3L995-1", "url": "https://www.uniprot.org/uniprotkb/I3L995/entry#I3L995-1", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALSKATILDLSCNKLTTLPSEFCGLTHLVKLDLSKNKLRQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKSLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEIDREAEKKWEAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPKKETNQAPKSKSGSRPRKPPPRKHTRSWAVLKLLLLLLLCVAGGLVACRVTELQQQPLCTSVNTIYDNAVRGLRSHDIVQWVLQTDSQQ", "length": 306, "header": "tr|I3L995-1|I3L995_PIG Isoform 1 of Leucine-rich repeat-containing protein 59 OS=Sus scrofa OX=9823 GN=LRRC59 PE=1 SV=4 CANONICAL=I3L995-1" }, "locus": { "chromosome": "12", "start_pos": 26694060, "end_pos": 26679952, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023663.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023663.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020607.4", "url": "https://www.ensembl.org/id/ENSSSCP00000020607.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L995", "url": "https://www.uniprot.org/uniprotkb/I3L995" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514317", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514317", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A3L7HDV9-1", "protein_name": "Leucine-rich repeat-containing protein 59", "gene_name": "Lrrc59", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALPKATVLDLSCNKLSTLPSDFCGLTHLVKLDLSKNKLQQLPADFGRLVNLQHLDLLNNKLVTLPVSFAQLKNLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEVEREAEKKREAKQQAKEAKERELRKREKAEEKERRRKEYDAQKASKREQEKKPKKETNQAPKSKSGSRPRKPPPRKHNRSWVVLKVLLLLLLLCVAGGLVACRMTGLQQQPLCNSVNTIYDNAVQGLRHHEILQWVLQTDSQQ", "length": 307 }, "evidence": [ { "id": "I3L995", "url": "https://omabrowser.org/oma/group/I3L995/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q5E9X4-1", "protein_name": "Leucine-rich repeat-containing protein 59", "gene_name": "LRRC59", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALPKATVLDLSCNKLTTLPSDFCGLTHLVKLDLSKNKLRQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKSLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEIDREAEKKWEAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPKKETNQAPKSKSSSRPRKPPPRKHTRSWAVLKLLLLLLLCVAGGLVACRVTELQQQPLCTSVNTIYDNAVRGLRSHDILQWVLQTDSQQ", "length": 306 }, "evidence": [ { "id": "I3L995", "url": "https://omabrowser.org/oma/group/I3L995/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5RJR8-1", "protein_name": "Leucine-rich repeat-containing protein 59", "gene_name": "Lrrc59", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTKTGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALPKATVLDLSCNKLSTLPSDFCGLTHLVKLDLSKNKLQQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKNLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEVEREAEKKREAKQQAKEAKERELRKREKAEEKERRRKEYDAQKASKREQEKKPKKETNQAPKSKSGSRPRKPPPRKHNRSWAVLKGLLLLLLLCVAGGLVVCRVTGLQQQPLCTSVNAIYDNAVQGLRHHEILQWVLQTDSQQ", "length": 307 }, "evidence": [ { "id": "I3L995", "url": "https://omabrowser.org/oma/group/I3L995/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q922Q8-1", "protein_name": "Leucine-rich repeat-containing protein 59", "gene_name": "Lrrc59", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALPKATVLDLSCNKLSTLPSDFCGLTHLVKLDLSKNKLQQLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKNLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEVEREAEKKREAKQQAKEAKERELRKREKAEEKERRRKEYDAQKASKREQEKKPKKEANQAPKSKSGSRPRKPPPRKHTRSWAVLKVLLLLLLLCVAGGLVVCRVTGLHQQPLCTSVNTIYDNAVQGLRHHEILQWVLQTDSQQ", "length": 307 }, "evidence": [ { "id": "I3L995", "url": "https://omabrowser.org/oma/group/I3L995/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q96AG4-1", "protein_name": "Leucine-rich repeat-containing protein 59", "gene_name": "LRRC59", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTKAGSKGGNLRDKLDGNELDLSLSDLNEVPVKELAALPKATILDLSCNKLTTLPSDFCGLTHLVKLDLSKNKLQQLPADFGRLVNLQHLDLLNNKLVTLPVSFAQLKNLKWLDLKDNPLDPVLAKVAGDCLDEKQCKQCANKVLQHMKAVQADQERERQRRLEVEREAEKKREAKQRAKEAQERELRKREKAEEKERRRKEYDALKAAKREQEKKPKKEANQAPKSKSGSRPRKPPPRKHTRSWAVLKLLLLLLLFGVAGGLVACRVTELQQQPLCTSVNTIYDNAVQGLRRHEILQWVLQTDSQQ", "length": 307 }, "evidence": [ { "id": "I3L995", "url": "https://omabrowser.org/oma/group/I3L995/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nuclear envelope", "id": "GO:0005635", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005635", "evidence": [ { "database": "UniProtKB", "id": "I3L995", "url": "https://www.uniprot.org/uniprotkb/I3L995" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": 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"categories": [ "Enzyme and Pathway" ] }, { "id": "TRCQYEP", "url": "https://omabrowser.org/oma/group/TRCQYEP/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L9K9", "url": "https://www.orthodb.org/?gene=I3L9K9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24201", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24201", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00023", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00023", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12796", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12796", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13637", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13637", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003357826", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357826", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L9K9", "url": "https://www.uniprot.org/uniprotkb/I3L9K9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9K9-1", "url": "https://www.uniprot.org/uniprotkb/I3L9K9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAASVDPRRLYRLVHEGQLCALREELRAAGRADCAGPAGDTLLHCAARHGHLDVLTYLVEAWDMDIEATNRDYKRPLHEAASMGHRDCVRYLLGRGAAVDCLKKADWTPLMMACTRRNLEVVQDLVEHGANPLLKNKDGWNSFHIASREGDPRILQYLLTVCPAAWKTESKVGRTPLHTAAMHGCLEAVKLLLQRCQYEADCRDKCGLTPFMDAIQCGHLGVARLLLEKHKAQVSSEDSLGAQALHRAAVTGQDEAIRFLVSELGVDVDVKATSACSSALHYAAKEGHVSTVQTLLSLGADLNAKDGRDRSALHLACAGQHAACVAFLLRSGLGDSRDAAGALAQQLTQSEDVLRCFGSSATA", "length": 363, "header": "tr|I3L9K9-1|I3L9K9_PIG Isoform 1 of Ankyrin repeat domain-containing protein 16 OS=Sus scrofa OX=9823 GN=ANKRD16 PE=4 SV=1 CANONICAL=I3L9K9-1" }, "isoforms": [ { "isoform_ac": "I3L9K9-1", "url": "https://www.uniprot.org/uniprotkb/I3L9K9/entry#I3L9K9-1", "sequence": { "sequence": "MAASVDPRRLYRLVHEGQLCALREELRAAGRADCAGPAGDTLLHCAARHGHLDVLTYLVEAWDMDIEATNRDYKRPLHEAASMGHRDCVRYLLGRGAAVDCLKKADWTPLMMACTRRNLEVVQDLVEHGANPLLKNKDGWNSFHIASREGDPRILQYLLTVCPAAWKTESKVGRTPLHTAAMHGCLEAVKLLLQRCQYEADCRDKCGLTPFMDAIQCGHLGVARLLLEKHKAQVSSEDSLGAQALHRAAVTGQDEAIRFLVSELGVDVDVKATSACSSALHYAAKEGHVSTVQTLLSLGADLNAKDGRDRSALHLACAGQHAACVAFLLRSGLGDSRDAAGALAQQLTQSEDVLRCFGSSATA", "length": 363, "header": "tr|I3L9K9-1|I3L9K9_PIG Isoform 1 of Ankyrin repeat domain-containing protein 16 OS=Sus scrofa OX=9823 GN=ANKRD16 PE=4 SV=1 CANONICAL=I3L9K9-1" }, "locus": { "chromosome": "10", "start_pos": 65121587, "end_pos": 65109126, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029024.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029024.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020722.1", "url": "https://www.ensembl.org/id/ENSSSCP00000020722.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L9K9", "url": "https://www.uniprot.org/uniprotkb/I3L9K9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622390", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622390", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XLY3-1", "protein_name": "Ankyrin repeat domain-containing protein 16", "gene_name": "ANKRD16", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAEWPRLLTLARQGKLDLLEAALRDGDVTNRRCDRSGDTLLHVAARHGHLHLLVLLLETLGMDVEVANGDYKRPLHEAASMGHRECVSYLLAKGASVDCLKRADWTPLMMACTRQNLEVIKELMEHGANPLLKNKDGWNCFHIASREGHLEVLQYLLAVFPSSWDTESTIRRTPLHTAAMHGCFDAVELLLERCHYKPDSRDNCGVTPFMDAIQNGHVNIARLLLEKHQACPTAVDALGAQPLHRAAVTAQDEAIQFLVSELGVDVNGRATPLQLTALHYAAKEGHMCTIQTLLSLGANIHAKDGKGRSALHAACAGQHAAAAQILLSTGLQDSEDSTGTLAQQLARKPDVIQVFQRTNVNS", "length": 362 }, "evidence": [ { "id": "I3L9K9", "url": "https://omabrowser.org/oma/group/I3L9K9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7FMV1-1", "protein_name": "Ankyrin repeat domain-containing protein 16", "gene_name": "Ankrd16", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MAPPGDPRRLCRLVQEGRLRALQEELEGAGGCQGPEAARGCQGPAGDTLVHCAARHGRQDILAYLVETWSMDIEAANRDYKRPLHEAASMGHRDCVRYLLDRGAVVDSLKKADWTPLMMACTRKNLEVIQDLVEHGANPLLKNKDGWNSFHIASREGDPVILRYLLTVCPDAWKTESNIRRTPLHTAAMHGCFEAVQELLDRELSVYKLNRATNQSAWQGIQDPQRCHYEPDCKDNCGVTPFMDAIQCGHVDIAKLLLEKHKACSSAEDSLGAQALHRAAVTGQNEAIRFLVSCLGVDIDVRAKTTQLTALHYAAKEGQTSTVQTLLSLGANINSKDERNRSALHLACAGQHVACTRFLLQSGLKDSEDLTGTLAQQLTKCIDILQDFDHTMKS", "length": 394 }, "evidence": [ { "id": "I3L9K9", "url": "https://omabrowser.org/oma/group/I3L9K9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A2AS55-1", "protein_name": "Ankyrin repeat domain-containing protein 16", "gene_name": "Ankrd16", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MALPGDPRRLCRLVQEGRLRDLQEELAVARGCRGPAGDTLLHCAARHGRQDILAYLVEAWSMDIEATNRDYKRPLHEAASMGHRDCVRYLLGRGAVVDSLKKADWTPLMMACTRKNLDVIQDLVEHGANPLLKNKDGWNSFHIASREGHPVILRYLLTVCPDAWKTESNIRRTPLHTAAMHGCLEAVQVLLERCHYEPDCRDNCGVTPFMDAIQCGHVSIAKLLLEQHKACSSAADSMGAQALHRAAVTGQDEAIRFLVCGLGIDVDVRAKSSQLTALHYAAKEGQTNTVQTLLSLGADINSTDERNRSVLHLACAGQHVACTRLLLQSGLKDSEDLTGTLAQQLTRSVDILQDFDHDVKS", "length": 361 }, "evidence": [ { "id": "I3L9K9", "url": "https://omabrowser.org/oma/group/I3L9K9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q499M5-1", "protein_name": "Ankyrin repeat domain-containing protein 16", "gene_name": "Ankrd16", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAPPGDPRRLCRLVQEGQLRALREELEVAGGCWDPEMFRGSQGPAGDTLLHFASRHGRQDILAYLVEAWSMDIEAANRDYKRPLHEAASMGHRDCVRYLLGRGAVVDSLKKADWTPLMMACTRKNLEVIQDLVEHGANPLLKNKDGWNSFHIASREGDPVILRYLLTVCPDVWKTESKIRRTPLHTAAMHGCFEAVQELLERCHYEPDCRDNCGVTPFMDAIQCGHVSIAKLLLENHEACSSATDSLGAQALHRAAVTGQDEAIRFLVCGLGIDVDVRAKSSQLTALLYAAKEGQTSTVQTLLSLGADINSTDERNRSALHLACAGQHAACARFLRQSGLKDSADLTGALAQQLTRGVAILQDFDPGVKS", "length": 370 }, "evidence": [ { "id": "I3L9K9", "url": "https://omabrowser.org/oma/group/I3L9K9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6P6B7-1", "protein_name": "Ankyrin repeat domain-containing protein 16", "gene_name": "ANKRD16", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAQPGDPRRLCRLVQEGRLRALKEELQAAGGCPGPAGDTLLHCAARHGHRDVLAYLAEAWGMDIEATNRDYKRPLHEAASMGHRDCVRYLLGRGAAVDCLKKADWTPLMMACTRKNLGVIQELVEHGANPLLKNKDGWNSFHIASREGDPLILQYLLTVCPGAWKTESKIRRTPLHTAAMHGHLEAVKVLLKRCQYEPDYRDNCGVTALMDAIQCGHIDVARLLLDEHGACLSAEDSLGAQALHRAAVTGQDEAIRFLVSELGVDVDVRATSTHLTALHYAAKEGHTSTIQTLLSLGADINSKDEKNRSALHLACAGQHLACAKFLLQSGLKDSEDITGTLAQQLPRRADVLQGSGHSAMT", "length": 361 }, "evidence": [ { "id": "I3L9K9", "url": "https://omabrowser.org/oma/group/I3L9K9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3L9K9", "url": "https://www.uniprot.org/uniprotkb/I3L9K9" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3L9K9", "url": "https://www.uniprot.org/uniprotkb/I3L9K9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L9L3-1", "uniprot_ac": "I3L9L3", "uniprot_id": "I3L9L3_PIG", "mass": { "chemical_mass": 37889.0, "monoisotopic_mass": 37889.0 }, "refseq": { "ac": "XP_020920252", "name": "zinc finger protein 367", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920252" }, "gene_names": [ { "name": "ZNF367", "type": "recommended", "evidence": [ { "id": "I3L9L3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9L3" } ] }, { "name": "ZNF367", "type": "synonym", "evidence": [ { "id": "XP_020920252", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920252" } ] } ], "protein_names": [ { "name": "Zinc finger protein 367", "type": "recommended", "evidence": [ { "id": "I3L9L3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9L3/entry#names_and_taxonomy" } ] }, { "name": "zinc finger protein 367", "type": "synonym", "evidence": [ { "id": "XP_020920252", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920252" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L9L3", "url": "https://www.uniprot.org/uniprotkb/I3L9L3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "ZNF367", "url": "https://www.uniprot.org/uniprotkb/I3L9L3", "locus": { "chromosome": "10", "start_pos": 25735067, "end_pos": 25707722, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028981", "url": "https://www.ensembl.org/id/ENSSSCG00000028981" } ] } } ], "crossref": [ { "id": "ENSSSCG00000028981", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028981", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100514675", "url": "https://www.ncbi.nlm.nih.gov/gene/100514675", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR013087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036236", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036236", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100514675", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514675", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NKHPHVI", "url": "https://omabrowser.org/oma/group/NKHPHVI/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L9L3", "url": "https://www.orthodb.org/?gene=I3L9L3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23235", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23235", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23235:SF130", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23235:SF130", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00096", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00096", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13912", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13912", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020920252", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020920252", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L9L3", "url": "https://www.uniprot.org/uniprotkb/I3L9L3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9L3-1", "url": "https://www.uniprot.org/uniprotkb/I3L9L3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MIRGVEAPMADNPPQPPPVIFCQDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGGAASAALPAVAEHSGLRGRGAPLPTPSAAAASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARLKREEPTDALSKPQAVDNQAAAEWLAKYWETREQRTPTLKGKLVQKADQEQQDPLEYLQSDGEDDEKSGAQRRLQEQRERLHGALALIELANLTGAPLRQ", "length": 346, "header": "tr|I3L9L3-1|I3L9L3_PIG Isoform 1 of Zinc finger protein 367 OS=Sus scrofa OX=9823 GN=ZNF367 PE=3 SV=2 CANONICAL=I3L9L3-1" }, "isoforms": [ { "isoform_ac": "I3L9L3-1", "url": "https://www.uniprot.org/uniprotkb/I3L9L3/entry#I3L9L3-1", "sequence": { "sequence": "MIRGVEAPMADNPPQPPPVIFCQDSPKRVLVSVIRTTPIKPTCGGGGEPEPPPPLIPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGGAASAALPAVAEHSGLRGRGAPLPTPSAAAASGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARLKREEPTDALSKPQAVDNQAAAEWLAKYWETREQRTPTLKGKLVQKADQEQQDPLEYLQSDGEDDEKSGAQRRLQEQRERLHGALALIELANLTGAPLRQ", "length": 346, "header": "tr|I3L9L3-1|I3L9L3_PIG Isoform 1 of Zinc finger protein 367 OS=Sus scrofa OX=9823 GN=ZNF367 PE=3 SV=2 CANONICAL=I3L9L3-1" }, "locus": { "chromosome": "10", "start_pos": 25732675, "end_pos": 25708098, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029185.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029185.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020726.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020726.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 112, "start_aa": "Thr", "end_pos": 112, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr112", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 253, "start_aa": "Thr", "end_pos": 253, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr253", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 42, "start_aa": "Thr", "end_pos": 42, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr42", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L9L3", "url": "https://www.uniprot.org/uniprotkb/I3L9L3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514675", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514675", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "F1NYF7-1", "protein_name": "Zinc finger protein 367", "gene_name": "ZNF367", "tax_id": 9031, "organism": 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"MIRGAPAPMAEPPPVVFCHDSPKRVLVSVIRTTPATPPCSSVGEPEPPPPLVPTSPGFSDFMVYPWRWGENAHNVTLSPGAAGGVVSAGLPVAAELPTLRGAPQSSASVAAVSGGEDEEEASSPDSGHLKDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREKSLQAHKRTHTGERPYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARLKREEPTDALSKHQSPDNKAAAEWLAKYWEMREQRTPTLKGKLVQKADQEQQDPLEYLQSDEEDDEKSGAQRRLQEQRERLHGALALIELANLTGAPLRQ", "length": 340 }, "evidence": [ { "id": "I3L9L3", "url": "https://omabrowser.org/oma/group/I3L9L3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5U2Z0-1", "protein_name": "Zinc finger protein 367", "gene_name": "Znf367", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": 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"MGNCVGRQRRERPTAPGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPIYCLSPPVNLLLEHTEEESPEPPEPTPSARREFPLKVRLSTGKDVRLSASLPDTVGQLKRQLHTQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQPPPPQD", "length": 227, "header": "tr|I3L9P2-1|I3L9P2_PIG Isoform 1 of Ubiquitin domain containing 1 OS=Sus scrofa OX=9823 GN=UBTD1 PE=4 SV=3 CANONICAL=I3L9P2-1" }, "isoforms": [ { "isoform_ac": "I3L9P2-1", "url": "https://www.uniprot.org/uniprotkb/I3L9P2/entry#I3L9P2-1", "sequence": { "sequence": "MGNCVGRQRRERPTAPGHPRKRAGRNEPLKKERLKWKSDYPMTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAYAAEANDHELAQAILDGASITLPHGTLCECYDELGNRYQLPIYCLSPPVNLLLEHTEEESPEPPEPTPSARREFPLKVRLSTGKDVRLSASLPDTVGQLKRQLHTQEGIEPSWQRWFFSGKLLTDRTRLQETKIQKDFVIQVIINQPPPPQD", "length": 227, "header": "tr|I3L9P2-1|I3L9P2_PIG Isoform 1 of Ubiquitin domain containing 1 OS=Sus scrofa OX=9823 GN=UBTD1 PE=4 SV=3 CANONICAL=I3L9P2-1" }, "locus": { "chromosome": "14", "start_pos": 108942485, "end_pos": 108887402, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027226.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027226.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020755.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020755.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 142, "start_aa": "Thr", "end_pos": 142, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr142", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig 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"https://www.ebi.ac.uk/interpro/entry/IPR003879", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013320", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013320", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR043136", "url": "https://www.ebi.ac.uk/interpro/entry/IPR043136", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050617", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050617", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738263", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738263", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WVFGYAQ", "url": "https://omabrowser.org/oma/group/WVFGYAQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L9T3", "url": "https://www.orthodb.org/?gene=I3L9T3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24099", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24099", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR24099:SF16", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24099:SF16", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00622", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00622", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003481678", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481678", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L9T3", "url": "https://www.uniprot.org/uniprotkb/I3L9T3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9T3-1", "url": "https://www.uniprot.org/uniprotkb/I3L9T3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": 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"ENSSSCG00000024059", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024059", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd08275", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd08275", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100625359", "url": "https://www.ncbi.nlm.nih.gov/gene/100625359", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR002364", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002364", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011032", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011032", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR013154", "url": "https://www.ebi.ac.uk/interpro/entry/IPR013154", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020843", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020843", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036291", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036291", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052100", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052100", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625359", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625359", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RPATWFT", "url": "https://omabrowser.org/oma/group/RPATWFT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L9V2", "url": "https://www.orthodb.org/?gene=I3L9V2", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR44054", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44054", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR44054:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR44054:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF08240", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08240", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF13602", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13602", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6798695", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_005657006", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005657006", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "14269", "url": "https://www.rhea-db.org/rhea/14269", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "36435", "url": "https://www.rhea-db.org/rhea/36435", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "38663", "url": "https://www.rhea-db.org/rhea/38663", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "39743", "url": "https://www.rhea-db.org/rhea/39743", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "85243", "url": "https://www.rhea-db.org/rhea/85243", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "85247", "url": "https://www.rhea-db.org/rhea/85247", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9V2-1", "url": "https://www.uniprot.org/uniprotkb/I3L9V2-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSAEREVAEAATVVAAAEAGAGEDASSQLPKAEAAGDSQPPAVSEGADSPPLPPLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRVKACGLNFADLMARQGLYDRLPPLPITPGMEGAGVVIAVGEGVEDRKVGDRVMVLIRSGMWQEEVTVPSAHTFLMPEAMTFEEAAALLVNYITAYMVLFDFGNLRPGHSVLVHMAAGGVGMAALQLCRTVENVTVFGTASASKHEVLKENGVTHPIDYHTTDYVEEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVIIYGMANLLTGPKRNLMALARTWWNQFSVSALQLLPANRAVCGFHLGYLDGEVELVSGVVARLVALYNQGHIKPRIDSVWPFEKVADAMRQMQEKKNIGKVLLVPGPEKEN", "length": 400, "header": "tr|I3L9V2-1|I3L9V2_PIG Isoform 1 of NADPH-dependent quinone oxidoreductase VAT1 OS=Sus scrofa OX=9823 GN=VAT1 PE=1 SV=1 CANONICAL=I3L9V2-1" }, "isoforms": [ { "isoform_ac": "I3L9V2-1", "url": "https://www.uniprot.org/uniprotkb/I3L9V2/entry#I3L9V2-1", "sequence": { "sequence": "MSAEREVAEAATVVAAAEAGAGEDASSQLPKAEAAGDSQPPAVSEGADSPPLPPLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRVKACGLNFADLMARQGLYDRLPPLPITPGMEGAGVVIAVGEGVEDRKVGDRVMVLIRSGMWQEEVTVPSAHTFLMPEAMTFEEAAALLVNYITAYMVLFDFGNLRPGHSVLVHMAAGGVGMAALQLCRTVENVTVFGTASASKHEVLKENGVTHPIDYHTTDYVEEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVIIYGMANLLTGPKRNLMALARTWWNQFSVSALQLLPANRAVCGFHLGYLDGEVELVSGVVARLVALYNQGHIKPRIDSVWPFEKVADAMRQMQEKKNIGKVLLVPGPEKEN", "length": 400, "header": "tr|I3L9V2-1|I3L9V2_PIG Isoform 1 of NADPH-dependent quinone oxidoreductase VAT1 OS=Sus scrofa OX=9823 GN=VAT1 PE=1 SV=1 CANONICAL=I3L9V2-1" }, "locus": { "chromosome": "12", "start_pos": 19877807, "end_pos": 19871697, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025302.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025302.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020816.1", "url": "https://www.ensembl.org/id/ENSSSCP00000020816.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 116, "start_aa": "Thr", "end_pos": 116, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr116", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625359", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625359", "resource": "KEGG Pathway" }, { "id": "R-SSC-6798695", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798695", "resource": "Reactome", "description": "Neutrophil degranulation" } ], "orthologs": [ { "uniprot_canonical_ac": "F1MUP9-1", "protein_name": "NADPH-dependent quinone oxidoreductase VAT1", "gene_name": "VAT1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSAEREVAEAATVVAAAEAGAGEDASSQPPKAEAASDAQPSAASEGPAAPSPPPPLLRCLVLTGFGGYDKVKLQTRPAAPSAPGTGQLTLRVKACGLNFADLMARQGLYDRLPQLPVTPGMEGAGVVIAVGEGVNDRKIGDRVMVLIRSGMWQEEVTVPSAQTFLMPEAMTFEEAAALLVNYITAYMVLFDFGNLRPGHSVLVHMAAGGVGMAALQLCRTVENVTVFGTASASKHEVLKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLPANRAVCGFHLGYLEGEVELVSGVVTRLLALYNQGHIKPRIDSVWPFEKVADAMRQMQEKKNVGKVLLVPGPEKEN", "length": 402 }, "evidence": [ { "id": "I3L9V2", "url": "https://omabrowser.org/oma/group/I3L9V2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8JFV8-1", "protein_name": "NADPH-dependent quinone oxidoreductase VAT1", "gene_name": "vat1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MSGEDAPAQQQNAEEQKQQETKTPAESPKTESKPDPPPTSASTEAAATAAAAADTPAPAAEKAPEEDTFTYRALVLTGYGGYDKVKLQVKKGKPALKSGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVLVLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQSVLVHMAAGGVGIAATQLCKTVNDVTVFGTASASKHEVISQGGVTHPIDYRTRDYVEEVRKISPKGLDIVLDPLGGSDTHKGYNLLKPMGKLISYGAANMLAGQKKNLFAVAKTWYQQFSVHTLSLIQGNRSVCGFHLGYLDSETELIDQAMTAVMDLYRQGKVKPRIDSTYHLEQVGDAMRRMQERNNIGKIILTTEPMKEEEKKEEAKKDEEKKDDKKKDDKKKDDKKKEDKKKDEAKKEEKKDEKKKEEAKKDDKKAEEKKEEVKKEEN", "length": 484 }, "evidence": [ { "id": "I3L9V2", "url": "https://omabrowser.org/oma/group/I3L9V2/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q99536-1", "protein_name": "NADPH-dependent quinone oxidoreductase VAT1", "gene_name": "VAT1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSDEREVAEAATGEDASSPPPKTEAASDPQHPAASEGAAAAAASPPLLRCLVLTGFGGYDKVKLQSRPAAPPAPGPGQLTLRLRACGLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDRKAGDRVMVLNRSGMWQEEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTALQLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHIDSVWPFEKVADAMKQMQEKKNVGKVLLVPGPEKEN", "length": 393 }, "evidence": [ { "id": "I3L9V2", "url": "https://omabrowser.org/oma/group/I3L9V2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrial outer membrane", "id": "GO:0005741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005741", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "pmid": "" }, { "name": "NADPH dehydrogenase (quinone) activity", "id": "GO:0008753", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008753", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "pmid": "" }, { "name": "phospholipid transfer activity", "id": "GO:0120014", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120014", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "negative regulation of mitochondrial fusion", "id": "GO:0010637", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010637", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "pmid": "" }, { "name": "intermembrane phospholipid transfer", "id": "GO:0120010", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120010", "evidence": [ { "database": "UniProtKB", "id": "I3L9V2", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 221, "end_pos": 223, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "14269", "name": "", "equation": "2 a quinone + NADPH + H(+) = 2 a 1,4-benzosemiquinone + NADP(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "14269", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/14269" } ] }, { "id": "36435", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phosphate(in) = a 1,2-diacyl-sn-glycero-3-phosphate(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "36435", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/36435" } ] }, { "id": "38663", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phospho-L-serine(in) = a 1,2-diacyl-sn-glycero-3-phospho-L-serine(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "38663", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/38663" } ] }, { "id": "39743", "name": "", "equation": "a 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol)(in) = a 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "39743", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/39743" } ] }, { "id": "85243", "name": "", "equation": "2 1,2-naphthoquinone + NADPH + H(+) = 2 1,2-naphthosemiquinone + NADP(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "85243", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/85243" } ] }, { "id": "85247", "name": "", "equation": "2 9,10-phenanthroquinone + NADPH + H(+) = 2 9,10-phenanthrosemiquinone + NADP(+)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "85247", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/85247" } ] }, { "id": "R-SSC-6798751", "name": "Exocytosis of azurophil granule lumen proteins", "equation": "", "summary": "This event has been computationally inferred from an event that has been demonstrated in another species.

The inference is based on the homology mapping from PANTHER. Briefly, reactions for which all involved PhysicalEntities (in input, output and catalyst) have a mapped orthologue/paralogue (for complexes at least 75% of components must have a mapping) are inferred to the other species. High level events are also inferred for these events to allow for easier navigation.

More details and caveats of the event inference in Reactome. For details on PANTHER see also: http://www.pantherdb.org/about.jsp", "cellular_location": "extracellular region, azurophil granule lumen", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "R-SSC-6798751", "database": "Reactome", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6798751" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L9V2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9V2" }, { "id": "SM00829", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00829" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Enoyl reductase (ER)", "eco_id": "ECO_0000259", "start_pos": 64, "end_pos": 392, "start_aa": "Gly", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 116 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 221, "end_pos": 223 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", 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"MGGGGRGGSRGSPAEKNLPPSAHPPHRDAQRVEELCAKNHQLREQQKALKENLRALENRLRAGLCDRCMVTQELARKKQQEFESALLQNLQHVFLLTNELTRLQEENDTLKEEVKRLRGPGPKPPLREGSSDPPSPRLPPSLGAQKAITEKPLGGHEEREDDHPGAGRPQGNERPVGYRTSPVAKISPGANLPEPRAPDMSPQHISNQLHGTIAVLRPGSRACSANRGSANGTPPLPPPRSSPPSPPCGHSLPLDSFLQPSQPAAKTCESLKHPLPAERLCLLNRHLALHLRSPYCSPRASATAPSGPQPQGLKAGETEAWEEPAGLLGLPGTLAGVRDSQLEGALHLLLAQQLRARGRMRGPRMRGQPAPGEPPPSPPASFNSEGPEGEAAGTALPRGRHPQPTAPGSPSGKEATATQDGAPDKPLDLSERGRGRDSTPKPASLLGSLSPPIAHTPSPKPPQGAEAPGQPGAQGLSNGTKGAREPESLSASPQDPPRCLPGPHPSLPSPSGTDEDRGRPKPPPRSQRPEGDGCPGADEWVPAPRRGWGCWAWGRVLTMATPHTPQVGLDLEAGATRSAPGEGPSCFCAKERGRGLQQKRKRASDPDPWSKGMGGEGDAAAAPAPPPPFLAAWSPEASPRASPRAAQEGEGWVRPG", "length": 656, "header": "tr|I3L9W0-1|I3L9W0_PIG Isoform 1 of RBBP8 N-terminal like OS=Sus scrofa OX=9823 GN=RBBP8NL PE=4 SV=3 CANONICAL=I3L9W0-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FAW1-1", "url": "https://www.uniprot.org/uniprotkb/I3L9W0/entry#A0A8W4FAW1-1", "sequence": { "sequence": 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"https://www.ensembl.org/id/ENSSSCT00000092202.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076407.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076407.1" } ] } }, { "isoform_ac": "I3L9W0-1", "url": "https://www.uniprot.org/uniprotkb/I3L9W0/entry#I3L9W0-1", "sequence": { "sequence": "MGGGGRGGSRGSPAEKNLPPSAHPPHRDAQRVEELCAKNHQLREQQKALKENLRALENRLRAGLCDRCMVTQELARKKQQEFESALLQNLQHVFLLTNELTRLQEENDTLKEEVKRLRGPGPKPPLREGSSDPPSPRLPPSLGAQKAITEKPLGGHEEREDDHPGAGRPQGNERPVGYRTSPVAKISPGANLPEPRAPDMSPQHISNQLHGTIAVLRPGSRACSANRGSANGTPPLPPPRSSPPSPPCGHSLPLDSFLQPSQPAAKTCESLKHPLPAERLCLLNRHLALHLRSPYCSPRASATAPSGPQPQGLKAGETEAWEEPAGLLGLPGTLAGVRDSQLEGALHLLLAQQLRARGRMRGPRMRGQPAPGEPPPSPPASFNSEGPEGEAAGTALPRGRHPQPTAPGSPSGKEATATQDGAPDKPLDLSERGRGRDSTPKPASLLGSLSPPIAHTPSPKPPQGAEAPGQPGAQGLSNGTKGAREPESLSASPQDPPRCLPGPHPSLPSPSGTDEDRGRPKPPPRSQRPEGDGCPGADEWVPAPRRGWGCWAWGRVLTMATPHTPQVGLDLEAGATRSAPGEGPSCFCAKERGRGLQQKRKRASDPDPWSKGMGGEGDAAAAPAPPPPFLAAWSPEASPRASPRAAQEGEGWVRPG", "length": 656, "header": "tr|I3L9W0-1|I3L9W0_PIG Isoform 1 of RBBP8 N-terminal like OS=Sus scrofa OX=9823 GN=RBBP8NL PE=4 SV=3 CANONICAL=I3L9W0-1" }, "locus": { "chromosome": "17", "start_pos": 61787321, "end_pos": 61782608, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026663.3", "url": "https://www.ensembl.org/id/ENSSSCT00000026663.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020824.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020824.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 405, "start_aa": "Thr", "end_pos": 405, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr405", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L9W0", "url": "https://www.uniprot.org/uniprotkb/I3L9W0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 107, "end_pos": 109, "annotation": "n_glycosylation_sequon" }, { "start_pos": 231, "end_pos": 233, "annotation": "n_glycosylation_sequon" }, { "start_pos": 478, "end_pos": 480, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L9W0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 656, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L9W0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L9W0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3L9W0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9W0" }, { "id": "PF10482", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10482" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DNA endonuclease Ctp1 N-terminal", "eco_id": "ECO_0000259", "start_pos": 27, "end_pos": 115, "start_aa": "Arg", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 405 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 107, "end_pos": 109 }, { "start_pos": 231, "end_pos": 233 }, { "start_pos": 478, "end_pos": 480 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 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"https://www.ebi.ac.uk/interpro/entry/pfam/PF12799", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020938209", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938209", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L9W1", "url": "https://www.uniprot.org/uniprotkb/I3L9W1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9W1-1", "url": "https://www.uniprot.org/uniprotkb/I3L9W1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MDQAWDRAHGPRPNTATVQVRELSWLGLHNPCPQIKDRGSHGGGQSQQLGEEHLAPTRLQALAQAGDLRQVSVLELCVDTRRNSLGNFGVHLPNLSQLKLNGSCLGSLRDLGTALGRLQVLWLARCGLADLDGISSFPELKELYLSYNGIADVSPLCLLEQLEVLDLEGNCVEGLGQLSYLQLCPRLAVLTLEGNPVCLRPGPGPADTVPEGYNYRAEVTKLIPQLQVLDEVPATHTGLPTSRKLDQDWLMVKQAIKKGSVLDSPHPGLGRPHGPPTWRLGPKLSPPEIQPWVPRPWPLSLLVPGGPLPEDLLPKGLAPEDDASNLTHGAGRVLCGNPTKALQERRHQGQAWVYPEKLPPHRPEDLATGVSTPRPDPVDSRDLRASAGLQALREPRLRPLPRRRLESGEEGTTAPWGPQRAPEEQEDEAGPEPRSRPPSLVPETSRTLDYSLIPSPPKSLMSSDRGSSWGSTDLQFRGRRLRALGTLGSDPGQGLAAVTALRALEVASGPSPRARGCPGPKPAPDPAARPLASGACHT", "length": 538, "header": "tr|I3L9W1-1|I3L9W1_PIG Isoform 1 of Leucine rich repeat containing 56 OS=Sus scrofa OX=9823 GN=LRRC56 PE=4 SV=2 CANONICAL=I3L9W1-1" }, "isoforms": [ { "isoform_ac": "I3L9W1-1", "url": "https://www.uniprot.org/uniprotkb/I3L9W1/entry#I3L9W1-1", "sequence": { "sequence": "MDQAWDRAHGPRPNTATVQVRELSWLGLHNPCPQIKDRGSHGGGQSQQLGEEHLAPTRLQALAQAGDLRQVSVLELCVDTRRNSLGNFGVHLPNLSQLKLNGSCLGSLRDLGTALGRLQVLWLARCGLADLDGISSFPELKELYLSYNGIADVSPLCLLEQLEVLDLEGNCVEGLGQLSYLQLCPRLAVLTLEGNPVCLRPGPGPADTVPEGYNYRAEVTKLIPQLQVLDEVPATHTGLPTSRKLDQDWLMVKQAIKKGSVLDSPHPGLGRPHGPPTWRLGPKLSPPEIQPWVPRPWPLSLLVPGGPLPEDLLPKGLAPEDDASNLTHGAGRVLCGNPTKALQERRHQGQAWVYPEKLPPHRPEDLATGVSTPRPDPVDSRDLRASAGLQALREPRLRPLPRRRLESGEEGTTAPWGPQRAPEEQEDEAGPEPRSRPPSLVPETSRTLDYSLIPSPPKSLMSSDRGSSWGSTDLQFRGRRLRALGTLGSDPGQGLAAVTALRALEVASGPSPRARGCPGPKPAPDPAARPLASGACHT", "length": 538, "header": "tr|I3L9W1-1|I3L9W1_PIG Isoform 1 of Leucine rich repeat containing 56 OS=Sus scrofa OX=9823 GN=LRRC56 PE=4 SV=2 CANONICAL=I3L9W1-1" }, "locus": { "chromosome": "2", "start_pos": 323062, "end_pos": 307095, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052417.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052417.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036302.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036302.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L9W1", "url": "https://www.uniprot.org/uniprotkb/I3L9W1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100514944", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100514944", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A061IFX1-1", "protein_name": "Leucine-rich repeat-containing protein 56", "gene_name": "Lrrc56", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MDPAWDGSQGPRPGTASIRVRELSWQGLNNPCPQNKRLGSHGDIHRERRVKEHLSPARLQALTQVDDLQLVRVLEMCVDTRKNSLGNFGVHLPNLIQLKLNHSCLGSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFLALKELYVSYNNISDLSPLCLLEQLEVLDLEGNDVEDLGQMRYLQLCPRLATLTLEGNLVCLKPDPGPSNKAPQDYNYRVEVKKLIPQLHMLDEVPTTCTNLPAPQKLNEDWLMVKEAIKEGSVLDILLPRLDCSHGTTIQKLDPTLPVPETQPWALSLLVPEDPLPEGLLSENPATEDHASNLTHGAGQVLCGNPTKGLRERRYQYQEWASLEKLPPHRPDLATSPSTPRPDPAEICDQDMTGLQAWREPGLRPLLHRQLDFQQERLAQAPAQDPQKVPEEQEDQTGTNTSLTTPRLASEFSRTSGLHLIPSPPKYPMPPESGSGSSGRSADLPFRGRRLRVLGSLGPSLGEGSGLGERLAAVTALRALEVPSGPSHRVHGCPDPKPALVPAACPPGLRCLHHLNPIPPAHSLP", "length": 552 }, "evidence": [ { "id": "I3L9W1", "url": "https://omabrowser.org/oma/group/I3L9W1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q4V8C9-1", "protein_name": "Leucine-rich repeat-containing protein 56", "gene_name": "Lrrc56", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MDPAWDGSQGSRPGTASIRVRELSWQGLNNPQPQNKRLGSHGDIYRERRVEEHLSPARLQALAQVDDLQLVRVLEMCVDTRKNSLGNFGMHLPNLIQLKLNHSCLGSLRDLGTSLGQLQVLWLARCGLTDLDGIGSFLALKELYVSYNNISDLSPLCLLEQLEVLDLEGNNVEDLGQMRYLQLCPRLTTLTLEGNLVCLKPDPGPSNKAPQDYNYRAEVKKLIPQLHILDEVPTTCTNLPAPQKLSQDWLMVKEAIKEGNVLDILLPRLECSHGATIRKFDPTLPVPETQPWALSLLVPEGPLPEGLLSENPAAEDHASNLTHGPGQVLCGNPTKGLRERRNQYQEWAPLEQLPPHRPDLAIRPSTLRPDPAESCDLSMTGLRAWREPGLRPLLQRQLEFQQERLTHVQAQDPQKAPIEQEDQTGPKTSLTPLRLASELSRTSGFHLIPSPPKYPMPPESGISSLGRSADLPFRGRRLRVLGSLGPSLGEGSVLGERLALRALEVSSDPSHRAQGCPDPKPSLGPATCPLGLHCLHHLNPIPPAHPFP", "length": 548 }, "evidence": [ { "id": "I3L9W1", "url": "https://omabrowser.org/oma/group/I3L9W1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8IYG6-1", "protein_name": "Leucine-rich repeat-containing protein 56", "gene_name": "LRRC56", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDLGWDRSRGPRRSTSSVRVRELSWQGLHNPCPQSKGPGSQRDRLGEQLVEEYLSPARLQALARVDDLRLVRTLEMCVDTREGSLGNFGVHLPNLDQLKLNGSHLGSLRDLGTSLGHLQVLWLARCGLADLDGIASLPALKELYASYNNISDLSPLCLLEQLEVLDLEGNSVEDLGQVRYLQLCPRLAMLTLEGNLVCLQPAPGPTNKVPRGYNYRAEVRKLIPQLQVLDEVPAAHTGPPAPPRLSQDWLAVKEAIKKGNGLPPLDCPRGAPIRRLDPELSLPETQSRASRPWPFSLLVRGGPLPEGLLSEDLAPEDNTSSLTHGAGQVLCGNPTKGLRERRHQCQAREPPEQLPQHRPGDPAASTSTPEPDPADSSDFLALAGLRAWREHGVRPLPYRHPESQQEGAVAPWGPRRVPEEQVHQAEPKTPSSPPSLASEPSGTSSQHLVPSPPKHPRPRDSGSSSPRWSTDLQSRGRRLRVLGSWGPGLGDGVAAVPVLRALEVASRLSPRAQGCPGPKPAPDAAARPPRAAELSHPSPVPT", "length": 542 }, "evidence": [ { "id": "I3L9W1", "url": "https://omabrowser.org/oma/group/I3L9W1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8K375-1", "protein_name": "Leucine-rich repeat-containing protein 56", "gene_name": "Lrrc56", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MDPAWDGSQGSRPGTASIRVRELSWQGLNNPHPQNKRLGSHGDIHRERWVEERLSPARLQALAQVDDLQLVRVLEMCVDTRKNSLGNFGLYLPNLIQLKLNHSYLGSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFLELKELYVSYNNISDLSPLCLLEQLEVLDLEGNNVEDLGQMRYLQLCPRLAMLTLEGNLVCLKPDPGPSNKAPQGYNYRAEVKKLIPQLHVLDEVPTTCTSAPAPQTLSQDWLMVKEAIKEGSVLDILLPRLDDPHGATIRKFDPTLPVPETQPWALSLLVPGGPLPEGLLSENPATEDHASNLTHGPGQVLCGNPTKGLRKRRNQYQEWAPLEQMPPHRPDLAIRPSTPRPDPAESCDLAMTGLRAWTEPGLRPLLQRQLEFQQERSAQVQAQDPQKDPVEQEDQTGPKTSLTPPRLVSELSRTSGFHLIPSPPKYPMPPESGISSLGRSADLPFRGRRLRVLGSLGPSLGEGSVLGERLAAVTALRALEASSGPSHRAQGCPDPKPALGPAACPPGLHCLHHLNPIPPAHSLP", "length": 552 }, "evidence": [ { "id": "I3L9W1", "url": "https://omabrowser.org/oma/group/I3L9W1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": {}, "pro_annotation": [], "site_annotation": [ { "start_pos": 101, "end_pos": 103, "annotation": "n_glycosylation_sequon" }, { "start_pos": 325, "end_pos": 327, "annotation": "n_glycosylation_sequon" }, { "start_pos": 94, "end_pos": 96, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3L9W1-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 538, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3L9W1-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3L9W1" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 101, "end_pos": 103 }, { "start_pos": 325, "end_pos": 327 }, { "start_pos": 94, "end_pos": 96 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L9W7-1", "uniprot_ac": "I3L9W7", "uniprot_id": "I3L9W7_PIG", "mass": { "chemical_mass": 38719.0, "monoisotopic_mass": 38719.0 }, "refseq": { "ac": "XP_003357440", "name": "kelch domain-containing protein 8A", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357440" }, "gene_names": [ { "name": "KLHDC8A", "type": "recommended", "evidence": [ { "id": "I3L9W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9W7" } ] }, { "name": "KLHDC8A", "type": "synonym", "evidence": [ { "id": "XP_003357440", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357440" } ] } ], "protein_names": [ { "name": "Kelch domain containing 8A", "type": "synonym", "evidence": [ { "id": "I3L9W7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L9W7/entry#names_and_taxonomy" } ] }, { "name": "kelch domain-containing protein 8A", "type": "synonym", "evidence": [ { "id": "XP_003357440", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357440" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L9W7", "url": "https://www.uniprot.org/uniprotkb/I3L9W7" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "KLHDC8A", "url": "https://www.uniprot.org/uniprotkb/I3L9W7", "locus": { "chromosome": "9", "start_pos": 66013573, "end_pos": 66025854, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023441", "url": "https://www.ensembl.org/id/ENSSSCG00000023441" } ] } } ], "crossref": [ { "id": "ENSSSCG00000023441", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023441", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100625797", "url": "https://www.ncbi.nlm.nih.gov/gene/100625797", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR006652", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006652", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011043", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011043", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015915", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015915", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051746", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051746", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625797", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625797", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FPYPVHH", "url": "https://omabrowser.org/oma/group/FPYPVHH/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L9W7", "url": "https://www.orthodb.org/?gene=I3L9W7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46260", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46260", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46260:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46260:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01344", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01344", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF24681", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF24681", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003357440", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003357440", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "I3L9W7", "url": "https://www.uniprot.org/uniprotkb/I3L9W7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L9W7-1", "url": "https://www.uniprot.org/uniprotkb/I3L9W7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEVPNVKDFQWKRLAPLPSRRVYCSLLETGGQVYAIGGCDDNGVPMDCFEVYSPEADQWTALPPLPTARAGVAVTALGKRIMVIGGVGTSQLPLKVVEMYNIDEGKWKKRSMLREAAMGISVTAKDYRVYAAGGMGLDLRPHNHLQHYDMLKDMWVSLAPMPTPRYAATSFLRGSKIYVLGGRQSKYAVNAFEVFDIETRSWTKFPNIPCKRAFSSFVTLDDRLYSLGGLRQGRLYRQPKFLRTMDVFDMEQGGWLKMERSFFLKKRRADFVAGSVSGRVIVAGGLGNQPTVLETAEAFHPGKNKWEVLPAMPTPRCACSSIVIKNCLLAVGGVNQGLSDAVEALCVSDS", "length": 350, "header": "tr|I3L9W7-1|I3L9W7_PIG Isoform 1 of Kelch domain containing 8A OS=Sus scrofa OX=9823 GN=KLHDC8A PE=4 SV=1 CANONICAL=I3L9W7-1" }, "isoforms": [ { "isoform_ac": "I3L9W7-1", "url": "https://www.uniprot.org/uniprotkb/I3L9W7/entry#I3L9W7-1", "sequence": { "sequence": "MEVPNVKDFQWKRLAPLPSRRVYCSLLETGGQVYAIGGCDDNGVPMDCFEVYSPEADQWTALPPLPTARAGVAVTALGKRIMVIGGVGTSQLPLKVVEMYNIDEGKWKKRSMLREAAMGISVTAKDYRVYAAGGMGLDLRPHNHLQHYDMLKDMWVSLAPMPTPRYAATSFLRGSKIYVLGGRQSKYAVNAFEVFDIETRSWTKFPNIPCKRAFSSFVTLDDRLYSLGGLRQGRLYRQPKFLRTMDVFDMEQGGWLKMERSFFLKKRRADFVAGSVSGRVIVAGGLGNQPTVLETAEAFHPGKNKWEVLPAMPTPRCACSSIVIKNCLLAVGGVNQGLSDAVEALCVSDS", "length": 350, "header": "tr|I3L9W7-1|I3L9W7_PIG Isoform 1 of Kelch domain containing 8A OS=Sus scrofa OX=9823 GN=KLHDC8A PE=4 SV=1 CANONICAL=I3L9W7-1" }, "locus": { "chromosome": "9", "start_pos": 66025699, "end_pos": 66019472, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031589.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031589.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020831.1", "url": "https://www.ensembl.org/id/ENSSSCP00000020831.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 163, "start_aa": "Thr", "end_pos": 163, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr163", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum 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"https://www.ensembl.org/id/ENSSSCP00000020926.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LA60", "url": "https://www.uniprot.org/uniprotkb/I3LA60" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525742", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525742", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E1C6V5-1", "protein_name": "Fasciculation and elongation protein zeta 2", "gene_name": "FEZ2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAASQRDPGDWQDFSGFQPSAGSAPEAARGDKGGWDLGAKLSLCFEPPPARAAGCGESRVPLRPLTEQSALQDDEIWNALTDNYGNVMPVDWKSSHTRALHLPTLNLSEKGVNDNLNLDLSDDEELREQLDMHSIIVSCINDEPLFTAEQVIEEIEEMMQESPDPEDDETPTQSDRLSILSQEIQTLKRSSTNNSYEERVKRLSVAELNELLEEIETAIKDYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQREHKETAKKKKKLKNGSPQNGKQERGHMPGTRFSMEGISNVIQNGFRHTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQTLTKILHAMKEDSEKVPSLLTDYILKVLCPT", "length": 369 }, "evidence": [ { "id": "I3LA60", "url": "https://omabrowser.org/oma/group/I3LA60/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "Q6TYB5-1", 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"name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LA74", "url": "https://www.uniprot.org/uniprotkb/I3LA74" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LA74-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 618, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LA74-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LA74" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 549 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], 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"MPCYFWDCWPSLEIRAVLCAMGCIQSIGGKARVFREGITVIDVKASIDPIPTSIDESSSVVLRYRTPHFRASAQVVMPPIPKKETWIVGWIQACSHMEFYNQYGEQGMSSWELPDLQEGKIEAISDSDGVNYPWYGNTTETCTIVGPTKRDSKFIISMNDNFYPSVTWAVPVSESNVAKLTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLREPIAQDQPKILSKNEPIPPSALVKPNANDAQVLMWRPKYGQPLVVIPPKHR", "length": 283 }, "evidence": [ { "id": "I3LA76", "url": "https://omabrowser.org/oma/group/I3LA76/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0A8V1AFB3-1", "protein_name": "Family with sequence similarity 78 member A", "gene_name": "FAM78A", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MGCIQSISCKSKVFRESISVIEVKASIDPIPTSIDESSSVVLRYRTPHFRASAQVLVPPIPKKETWIVGWIQACSHMEFYNHYGDQGMSSWELPDLLEGKIQAISDSDGVNYPWYGNTTETCTIVGPTKKESKFNISMNDNFYPSVTWAVPVSESNVAKLTSIHRDQSFTTWLVATNTATNEMVTLQTIKWRMRLGIEVNPSRPLGQRAKLQEPSAQEQPQVLSKNEPIPPSALVKPNANDAQVLMWRPKDGPPLVVIPPKHR", "length": 263 }, "evidence": [ { "id": "I3LA76", "url": 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"https://www.ncbi.nlm.nih.gov/protein/XP_003356346" } ] } ], "protein_names": [ { "name": "Transmembrane protein 54", "type": "synonym", "evidence": [ { "id": "I3LA99", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LA99/entry#names_and_taxonomy" } ] }, { "name": "transmembrane protein 54 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_003356346", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356346" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LA99", "url": "https://www.uniprot.org/uniprotkb/I3LA99" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TMEM54", "url": "https://www.uniprot.org/uniprotkb/I3LA99", "locus": { "chromosome": "6", "start_pos": 89196566, "end_pos": 89203900, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000026455", "url": "https://www.ensembl.org/id/ENSSSCG00000026455" } ] } } ], "crossref": [ { "id": "I3LA99", "url": "https://alphafold.ebi.ac.uk/entry/I3LA99", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026455", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026455", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100621456", "url": "https://www.ncbi.nlm.nih.gov/gene/100621456", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR020977", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020977", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100621456", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621456", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YVAGPHD", "url": "https://omabrowser.org/oma/group/YVAGPHD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A286ZLI1", "url": "https://www.orthodb.org/?gene=A0A286ZLI1", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LA99", "url": "https://www.orthodb.org/?gene=I3LA99", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR31258", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31258", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR31258:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR31258:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12304", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12304", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003356346", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003356346", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZLI1", "url": 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"https://www.uniprot.org/uniprotkb/I3LA99/entry#A0A286ZLI1-1", "sequence": { "sequence": "MCPTRDPDMAGCPSGGLSASDFRKVLMKTGLVLVVLGHVSFIAAALLHGTVLRYVTAPHDAVALQYCVVNILSVTSAIVVITSGIAAIVLSRYLPSSPLRWTVFSSNVACALLSLTCALGLLASIAVTFATQGRALLAACTFGSPELLALAPDCPFDPTRIYSSSLCLWGISLLFCVAESVFAVRCAQLAHQLLELRPWLGKSSHHMLSPQDQRERLGSSESSDLPAKPYS", "length": 231, "header": "tr|A0A286ZLI1-1|A0A286ZLI1_PIG Computationally mapped isoform of Transmembrane protein 54 OS=Sus scrofa OX=9823 GN=TMEM54 PE=3 SV=2 CANONICAL=I3LA99-1" }, "locus": { "chromosome": "6", "start_pos": 89200894, "end_pos": 89197488, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041339.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041339.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032426.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032426.2" } ] } }, { "isoform_ac": "I3LA99-1", "url": "https://www.uniprot.org/uniprotkb/I3LA99/entry#I3LA99-1", "sequence": { "sequence": 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Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LA99", "url": "https://www.uniprot.org/uniprotkb/I3LA99" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621456", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621456", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "Q3ZCD2-1", "protein_name": "Transmembrane protein 54", "gene_name": "TMEM54", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MCLRLGGLSVGDFRKVLMKTGLVLVVLGHVSFIAAALLHGTVLRYVAAPNDAVALQYCVVDILSVTSAIVVITSGISVIVLSRYLPSIPLRWTVFSSSVACALLSLTCALGLLASIAMTFATQGRALLAACTFGGPERLALAPDCPFDPTRIYSSSLCLWGISLLFCVAESVFAVRSAQLAYQVLELRPWLGKSSHRMMQESPEPVEDPDLPSRTSSGPMTL", "length": 222 }, "evidence": [ { "id": "I3LA99", "url": "https://omabrowser.org/oma/group/I3LA99/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q494T4-1", "protein_name": "Transmembrane protein 54", "gene_name": "Tmem54", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MCLRIGGLNVDEFRKLLMKTGLVLVVLGHVSFIAAAVLHGTMLRFVATTRDAVVLQYCVVDILSVTSAIVVILAGISAVILSRYLPSTPLRWTVFSLSVACALLSLTCALGLLASIAVTFATKGRALLAPCTFENTELPTLAPDCPFDPTRIYSSSLCLWAISLIFCLAESMSAVRCAQLVHRLLELRPWWGKSCHHTIQASPEPLDGHDLLSCTS", "length": 216 }, "evidence": [ { "id": "I3LA99", "url": "https://omabrowser.org/oma/group/I3LA99/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q969K7-1", "protein_name": "Transmembrane protein 54", "gene_name": "TMEM54", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MCLRLGGLSVGDFRKVLMKTGLVLVVLGHVSFITAALFHGTVLRYVGTPQDAVALQYCVVNILSVTSAIVVITSGIAAIVLSRYLPSTPLRWTVFSSSVACALLSLTCALGLLASIAMTFATQGKALLAACTFGSSELLALAPDCPFDPTRIYSSSLCLWGIALVLCVAENVFAVRCAQLTHQLLELRPWWGKSSHHMMRENPELVEGRDLLSCTSSEPLTL", "length": 222 }, "evidence": [ { "id": "I3LA99", "url": "https://omabrowser.org/oma/group/I3LA99/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D7S1-1", "protein_name": "Transmembrane protein 54", "gene_name": "Tmem54", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MCLRIGSLNVDEFRKVLMKTGLVLVVLGHVSFIAAAVLHGTMLRFVATTSDAVVLQYCAVDILSVTSAIVVIVAGISTIVLSRYLPSTPLRWTVFSLSVACALLSLTCALGLLASIAVTFATKGRALLAACTFENPELPTLAPDCPFDPTRIYSSSLCLWAISLIFCLAESMSAVRCAQLMHGLLELRPWWGKSCHHTIQASPEPLDAHDLLSCASSCS", 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"https://www.ensembl.org/id/ENSSSCP00000066988.1" } ] } }, { "isoform_ac": "I3LAB4-1", "url": "https://www.uniprot.org/uniprotkb/I3LAB4/entry#I3LAB4-1", "sequence": { "sequence": "MWRTCLRLRDGGRRLLNRPRGGLIASEGRGPSPPTPARAYAPPAERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAVAVATEWDSQQDTIKPYTMHLTTLCNTSLDNPTQRDKGQLIRAALKFLDTDTVCYRVEEPETLVELQRNEWDPVIAWAERRYGVEISSSTSILGPSIPARTREALVSHLASYNMWALQGIEFVVTQLKSMVLTLGLIDLYLTVERAVLLSRLEEEYQMQKWGSIEWAHDYELRELRARTAAGALFVHLCSESTTVKHKLLQG", "length": 289, "header": "tr|I3LAB4-1|I3LAB4_PIG Isoform 1 of ATP synthase mitochondrial F1 complex assembly factor 2 OS=Sus scrofa OX=9823 GN=ATPAF2 PE=3 SV=2 CANONICAL=I3LAB4-1" }, "locus": { "chromosome": "12", "start_pos": 60633039, "end_pos": 60617811, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029362.4", "url": "https://www.ensembl.org/id/ENSSSCT00000029362.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020982.2", "url": "https://www.ensembl.org/id/ENSSSCP00000020982.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 35, "start_aa": "Thr", "end_pos": 35, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr35", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LAB4", "url": "https://www.uniprot.org/uniprotkb/I3LAB4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100621967", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100621967", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Z276-1", "protein_name": "ATP synthase mitochondrial F1 complex assembly factor 2", "gene_name": "ATPAF2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MWRRRLLLQALGRLPALAARGRPLGPGGGRAYAPPAERKRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQKDTIKFYTMHLTTLCNTALDNPTQRNKVQLIRAAVKFLETDTVCYRVEEPAALAELQKKEWDPIVAWAEKRYNVAIGSSTSIMGPNIPASTRDTFISHLASYNMWALQGIEYVITQLKSLILSMGLIDRHITVEKAVLLSRLEEEYQIQRWGNVEWAHDYDLCELRARAAAGTLFVHLCSESSTVKHKLLQD", "length": 281 }, "evidence": [ { "id": "I3LAB4", "url": "https://omabrowser.org/oma/group/I3LAB4/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0ABK0LH14-1", "protein_name": "ATP synthase mitochondrial F1 complex assembly factor 2", "gene_name": "Atpaf2", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MWLRHPPAGDTRCGPASRGPPEPGLGEGEGTAAAAREPKLRGGRTRARTRGGGAGEPPARCRLTERSCRHLDPETCKQGLPVLSWAPLPTCPRGLTHTHTHTHTCTHTRAHTHSYTHARTHTYTHTHTHSRTHSHTYTHTHTHTNTHTLYCFQLARTRRRGGSKLTRRFRPLADRESTWCERKRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVEEPETLVELQKNEWDPIIEWAEKRYGMEIGSSTSIMGPSIPTQTREVLTSHLASYNMWALQGIEFVVAQLKSMLLTLGLIDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHLCSESSTVKHKLLQE", "length": 425 }, "evidence": [ { "id": "I3LAB4", "url": "https://omabrowser.org/oma/group/I3LAB4/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q1LZ96-1", "protein_name": "ATP synthase mitochondrial F1 complex assembly factor 2", "gene_name": "ATPAF2", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MWRRCLRLRDVGRRLLNLPRSGLTASEGLGPKLPTPIRAYVPPAERKRFYQNVSISQGEGGFEINLDHRKLRTPQGKLFTVPSEALAIAVATEWDSQQDTIKMYTMHLTTLCNTSLDNPTQRDKDQLIRAAVKFLDTDTVCYRVEEPETLVELQRNEWDPVISWAEKRYGVEIGSSTSITGPSIPARTREVLVSHLASYNMWALQGIEFVVTQLKSLVLTLGLTDLRLTVEQAVLLSRLEEEYQIQKWGNIEWAHDYELQELRARTAAGTLFVHLCSESTAVKHKLLQG", "length": 289 }, "evidence": [ { "id": "I3LAB4", "url": "https://omabrowser.org/oma/group/I3LAB4/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q54CV4-1", "protein_name": "ATP synthase mitochondrial F1 complex assembly factor 2", "gene_name": "atp12", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MIRSLRLINKNILLSNRKTFTTTSTNNKSNQTQFIIKDDNTVELSEELKASIKLEEQKKIVKEVMEKPQSSKFLKGDVLLEGVKSDGSSLRWYKTAGMCRTEPENPDQGYYPLIDERKIRTPSNHVIITPSKEIAYAVAAEWRAQEKYIKPSRLPITQTIISCLDVRPEGRFKIIGEFINHLATDPICNREKNDSKLKKLQSELYEPILQFANEYYGIPFSISTHLSISKHPKELLDKIERHLHSMNNWELVCLQLISQSSKSFLVALSLYYGKLRLDNLYQTIALEEEYQSETWGRIPFGHDLAECETHNEIAPPLFMLRNMNPIPLPK", "length": 330 }, "evidence": [ { "id": "I3LAB4", "url": "https://omabrowser.org/oma/group/I3LAB4/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8N5M1-1", "protein_name": "ATP synthase mitochondrial F1 complex assembly factor 2", "gene_name": "ATPAF2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": 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"https://omabrowser.org/oma/group/I3LAB4/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "I3LAB4", "url": "https://www.uniprot.org/uniprotkb/I3LAB4" } ], "pmid": "" }, { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "I3LAB4", "url": "https://www.uniprot.org/uniprotkb/I3LAB4" } ], "pmid": "" }, { "name": "nuclear speck", "id": "GO:0016607", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016607", "evidence": [ { "database": "UniProtKB", "id": "I3LAB4", "url": "https://www.uniprot.org/uniprotkb/I3LAB4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mitochondrial proton-transporting ATP synthase complex assembly", "id": "GO:0033615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033615", "evidence": [ { "database": "UniProtKB", "id": "I3LAB4", "url": "https://www.uniprot.org/uniprotkb/I3LAB4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 113, "end_pos": 115, "annotation": "n_glycosylation_sequon" }, { "start_pos": 52, "end_pos": 54, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LAB4-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 289, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LAB4-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LAB4" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], 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"title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LAC4-1", "uniprot_ac": "I3LAC4", "uniprot_id": "I3LAC4_PIG", "mass": { "chemical_mass": 20738.0, "monoisotopic_mass": 20738.0 }, "refseq": {}, "gene_names": [], "protein_names": [ { "name": "VAC14 component of PIKFYVE complex", "type": "recommended", "evidence": [ { "id": "I3LAC4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LAC4/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LAC4", "url": "https://www.uniprot.org/uniprotkb/I3LAC4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "", "url": "https://www.uniprot.org/uniprotkb/I3LAC4", "locus": {} } ], "crossref": [ { "id": "I3LAC4", "url": "https://alphafold.ebi.ac.uk/entry/I3LAC4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000026790", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026790", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR011989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR016024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR016024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR026825", "url": "https://www.ebi.ac.uk/interpro/entry/IPR026825", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR16023", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16023", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16023:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16023:SF0", "database": "PANTHER", "categories": [ 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Classification" ] }, { "id": "ssc:100520384", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520384", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "F1SQ12", "url": "https://www.orthodb.org/?gene=F1SQ12", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15034", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15034", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15034:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15034:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00531", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00531", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00619", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00619", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-6803207", "url": 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"https://www.uniprot.org/uniprotkb/A0A8W4FM34-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SQ12-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ12-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHVQEIKAQATGLRKTMLLLDILPSRGPKAFDVFLDSLQEFPWVREKLEKAREEAIVELPADDAMAGIPPHILSSSPSDRQINQLAQRLGPEWEPVVLSLGLSQTDIYRCKANHPHNVQSQVVEAFVRWRQRFGKQATFQSLHRSLQAMEVDPSVLQDMLE", "length": 199, "header": "tr|F1SQ12-1|F1SQ12_PIG Isoform 1 of Death domain-containing protein CRADD OS=Sus scrofa OX=9823 GN=CRADD PE=1 SV=3 CANONICAL=F1SQ12-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RI69-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ12/entry#A0A5G2RI69-1", "sequence": { "sequence": "MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHVQEIKAQATGLRKTMLLLDILPSRGPKAFDVFLDSLQEFPWVREKLEKAREEAIVELPAEIRKRRPEDSVTCLASQLTWRF", "length": 121, "header": "tr|A0A5G2RI69-1|A0A5G2RI69_PIG Computationally mapped isoform of CASP2 and RIPK1 domain containing adaptor with death domain OS=Sus scrofa OX=9823 GN=CRADD PE=1 SV=2 CANONICAL=F1SQ12-1" }, "locus": { "chromosome": "5", "start_pos": 89478785, "end_pos": 89267947, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089258.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089258.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000071202.2", "url": "https://www.ensembl.org/id/ENSSSCP00000071202.2" } ] } }, { "isoform_ac": "A0A8W4FH27-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ12/entry#A0A8W4FH27-1", "sequence": { "sequence": "TSRSCPKCTPPCLPGHMEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHVQEIKAQATGLRKTMLLLDILPSRGPKAFDVFLDSLQEFPWVREKLEKAREEAIVELPADDAMAGIPPHILSSSPSDRQINQLAQRLGPEWEPVVLSLGLSQTDIYRCKANHPHNVQSQVVEAFVRWRQRFGKQATFQSLHRSLQAMEVDPSVLQDMLE", "length": 215, "header": "tr|A0A8W4FH27-1|A0A8W4FH27_PIG Computationally mapped isoform of Death domain-containing protein CRADD OS=Sus scrofa OX=9823 GN=CRADD PE=1 SV=1 CANONICAL=F1SQ12-1" }, "locus": { "chromosome": "5", "start_pos": 89479712, "end_pos": 89308699, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092388.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092388.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077615.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077615.1" } ] } }, { "isoform_ac": "A0A8W4FM34-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ12/entry#A0A8W4FM34-1", "sequence": { "sequence": "MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHVQEIKAQATGLRKTMLLLDILPSRGPKAFDVFLDSLQEFPWVREKLEKAREEAIVELPAGSEENRRAGRRMGRAAGGERRGQECQSVGTRT", "length": 131, "header": "tr|A0A8W4FM34-1|A0A8W4FM34_PIG Computationally mapped isoform of CASP2 and RIPK1 domain containing adaptor with death domain OS=Sus scrofa OX=9823 GN=CRADD PE=1 SV=1 CANONICAL=F1SQ12-1" }, "locus": { "chromosome": "5", "start_pos": 89478785, "end_pos": 89431848, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092068.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092068.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080553.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080553.1" } ] } }, { "isoform_ac": "F1SQ12-1", "url": "https://www.uniprot.org/uniprotkb/F1SQ12/entry#F1SQ12-1", "sequence": { "sequence": "MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHVQEIKAQATGLRKTMLLLDILPSRGPKAFDVFLDSLQEFPWVREKLEKAREEAIVELPADDAMAGIPPHILSSSPSDRQINQLAQRLGPEWEPVVLSLGLSQTDIYRCKANHPHNVQSQVVEAFVRWRQRFGKQATFQSLHRSLQAMEVDPSVLQDMLE", "length": 199, "header": "tr|F1SQ12-1|F1SQ12_PIG Isoform 1 of Death domain-containing protein CRADD OS=Sus scrofa OX=9823 GN=CRADD PE=1 SV=3 CANONICAL=F1SQ12-1" }, "locus": { "chromosome": "5", "start_pos": 89478785, "end_pos": 89308699, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000000995.4", "url": "https://www.ensembl.org/id/ENSSSCT00000000995.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000000974.3", "url": "https://www.ensembl.org/id/ENSSSCP00000000974.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100520384", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100520384", "resource": "KEGG Pathway" }, { "id": "R-SSC-6803207", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6803207", "resource": "Reactome", "description": "TP53 Regulates Transcription of Caspase Activators and Caspases" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "death domain binding", "id": "GO:0070513", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070513", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "protease binding", "id": "GO:0002020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002020", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "protein-macromolecule adaptor activity", "id": "GO:0030674", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030674", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 8, "go_terms": [ { "name": "regulation of apoptotic process", "id": "GO:0042981", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042981", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "apoptotic signaling pathway", "id": "GO:0097190", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097190", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "positive regulation of apoptotic signaling pathway", "id": "GO:2001235", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:2001235", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "cellular response to mechanical stimulus", "id": "GO:0071260", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071260", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "DNA damage response, signal transduction by p53 class mediator", "id": "GO:0030330", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030330", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "positive regulation of apoptotic process", "id": "GO:0043065", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043065", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" }, { "name": "apoptotic process", "id": "GO:0006915", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006915", "evidence": [ { "database": "UniProtKB", "id": "F1SQ12", "url": "https://www.uniprot.org/uniprotkb/F1SQ12" } ], "pmid": "" } ] }, { "name": "Cellular Component", 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"https://www.ensembl.org/id/ENSSSCP00000078907.1" } ] } }, { "isoform_ac": "A0A8W4FK00-1", "url": "https://www.uniprot.org/uniprotkb/F1SV39/entry#A0A8W4FK00-1", "sequence": { "sequence": "GSITATMSETFDCAKCSESLYGRKYIQTDNGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGLGGGKYVSFEDRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGCSQAGP", "length": 286, "header": "tr|A0A8W4FK00-1|A0A8W4FK00_PIG Computationally mapped isoform of Four and a half LIM domains protein 3 OS=Sus scrofa OX=9823 GN=FHL3 PE=1 SV=1 CANONICAL=F1SV39-1" }, "locus": { "chromosome": "6", "start_pos": 93983126, "end_pos": 93981111, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000094922.1", "url": "https://www.ensembl.org/id/ENSSSCT00000094922.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000079225.1", "url": "https://www.ensembl.org/id/ENSSSCP00000079225.1" } ] } }, { "isoform_ac": "F1SV39-1", "url": "https://www.uniprot.org/uniprotkb/F1SV39/entry#F1SV39-1", "sequence": { "sequence": "MSETFDCAKCSESLYGRKYIQTDNGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGLGGGKYVSFEDRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGCSQAGP", "length": 280, "header": "tr|F1SV39-1|F1SV39_PIG Isoform 1 of Four and a half LIM domains protein 3 OS=Sus scrofa OX=9823 GN=FHL3 PE=1 SV=1 CANONICAL=F1SV39-1" }, "locus": { "chromosome": "6", "start_pos": 93983108, "end_pos": 93981111, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000004040.5", "url": "https://www.ensembl.org/id/ENSSSCT00000004040.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003949.2", "url": "https://www.ensembl.org/id/ENSSSCP00000003949.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SV39", "url": "https://www.uniprot.org/uniprotkb/F1SV39" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], 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"database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15778", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15778", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19424", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19424", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF20262", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20262", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2672351", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2672351", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A8W4F7K3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7K3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F7K3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F7K3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSS4", "url": "https://www.uniprot.org/uniprotkb/F1SSS4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSS4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSS4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDL4", "url": "https://www.uniprot.org/uniprotkb/I3LDL4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDL4-1", "url": "https://www.uniprot.org/uniprotkb/I3LDL4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVKRKSSEGQEQDSGRGIPLPIQTFLWRQTSAFLRPKLGKQYEASCVSFERVLVENKLHGLSPALSEAIQSISRWELVQAALPHVLHCTATLLSNRNKLGHQDKLGVAETKLLHTLHWMLLEAPQDCNNERLGGTDRGSSWGGSSSGFIHQVENQGSPGQPCQSTSNDDEENNRRKIFQNSMATVELFVFLFAPLVHRIKESDLTFRLASGLVIWQPMWEHRQPEVSGFTALVKPLRNIITAKRSSPINSQSQTCESPNPDTRHREGLQVVCETFQSDSISPKATISGCHRGNSFDGSLSSQTSQERGPSHSRASLVIPPCQRSRYATYFDVAVLRCLLQPHWSEEGTQWSLMYYLQRLRHMLEEKPEKPPEPDIPLLPRPRSSSMVAAAPSLVNTHKTQDLTMKCNEEEKSLSPEAFSKVSLTNLRRSAVPDLSSDLGMNIFKKFKSRKEDRERKGSIPFHHTGKRRPRRMGVPFLLHEDHLDVSPTRSTFSFGSFSGLGEDRRGIEKGGWQTTILGKFTRRGSSDAATEMESLGARHSHSHHTLVSDLPDHSNSHGDNTVKEVRSQISTITVATFNTTLASFNVGYADFFSEHMRKLCNQVPIPEMPHEPLACANLPRSLTDSCINYSYLEDTEHIDGTNNFVHKNGMLDLSVVLKAVYLVLNHDISSRICDVALNIVECLLQLGVVPCVEKNRKKSENKENGTAEKRPSEGTFQFKGVSGSSTCGFGGPSVSGAGDGGGEEGGGADGGGGGGDGGGGGGGGGGPYEKKDKNQEKDENIPVSNHRLALTMLIKIVKSLGCAYGCGEGHRGLSGDRLRHQVFRENAQNCLTKLYKLDKMQFRQTMRDYVNKDSLNNVVDFLHALLGFCMEPVTDNKAGFGNNFTTVDNKSTAQNVEGIIVSAMFKSLITRCASTTHELHSPENLGLYCDIRQLVQFIKEAHGNVFRRVALSALLDSAEKLAPGKKVEENEPESKPGGGKRSEAGSIADKGQVTSAPEECRSFMSGRPSQTPEHDEQMQGGNLGRKDFWRKMFKSQSAASDTSSQSEQDTSECTTAHSGTTSDRRARSRSRRISLRKKLKLPIGNWLKRSSLSGLADGVEDLLDISSVDRLSFIRQSSKVKFTSAVKLSEGGPGSGMENGRDEEENFFKRLGCHSFDDHLSSNQDGGKSKNVVNLGAIRQGMKRFQFLLNCCEPGTIPDASILAAALDLEAPVVARAALFLECARFVHRCNRGNWPEWMKGHHVNITKKGLSRGRSPIVGNKRNQKLQWNAAKLFYQWGDAIGVRLNELCHGESESPANLLGLIYDEETKRRLRKEDEEEDFLDDSTVNPSKCGCPFALKMAACQLLLEITTFLRETFSCLPRPRTEPLVDLESCRLRLDPELDRHRYERKISFAGVLDENEDSKDSLHSSSHTLKSDAGVEEKKEGSPWSASEPSIEPEGVSTAGVEENYHRNMSWLHVMILLCNQQSFICTHVDYCHPHCYLYHSRSCARLVRAIKLLYGDTVDSLRESNSISNVALRGKKQKECSDKSCLRTPSLKKRISDANLEGKKDSGMLKYIRLQVMSLSPAPLSLLIKAAPILTEEMYGDIQPAAWELLLSMDEHMAGAAAAMFLLCAVKVPEAVSDMLTSEFHHPETVQRLNAVLKFHTLWRFRYQVWPRMEEGAQQIFKIPPPSINFTLPSPVLGMPSVPMFDPPWVPQCSGSVQDPINEDQSKSFSARAVSRSHQRAEHILKNLQQEEEKKRLGREASLITAIPITQEACYEPTCTPSAEPEEEVEEVTNLASRRLSVSPSCTSSTSHRNYSFRRGSVWSVRSAVSAEDEEHTTEHTPNHHVPQPPQAVFPACICAAVLPIVHLMEDGEVREDGVAVSAVAQQVLWNCLIEDPSTVLRHFLEKLTISNRQDELMYMLRKLLLNIGDFPAQTSHILFNYLVGLIMYFVRTPCEWGMDAISATLTFLWEVVGYVEGLFFKDLKQTMKKEQCEVKLLVTASMPGTKTLVVHGQNECDIPTQLPVHEDTQFEALLKECLEFFNIPESQSTHYFLMDKRWNLIHYNKTYVRDIYPFRRSVSPQLNLVHMHPEKGQELIQKQVFTRKLEEVGRVLFLISLTQKIPTAHKQSHVSMLQEDLLRLPSFPRSAIDAEFSLFSDPQAGKELFGLDTLQKSLWIQLLEEMFLGMPSEFPWGDEIMLFLNVFNGALILHPEDSALLRQYAATVINSAVHFNHLFSLSGYQWILPTMLQVYSDYESNPQLRQAIEFACHQFYILHRKPFVLQLFASVAPLLEFPDAANTGSSKGVSAQCLFDLLQSLEGETTDILDILELVKAEKPLKSLDFCYGNEDLTFSISEAIKLCVTVVAYAPESFRSLQMLMVLEALVPCYLQKLKRQTSQVETVPAAREEIAATAALATSLQALLYSVEVLTRPMTAPQMSRCDQGHKGATTANHTMSSGVNTRYQEQGAKLHFIRENLHLLEEGQGLPREELDERIAREEFRRPRESLLNICTEFYKHCGPRLKILQNLAGEPRVTALELLDVKSHMRLAEIAHSLLKLAPYDTQTMESRGLRRYIMEMLPITDWTAEAVRPALILILKRLDRMFNKIHKMPTLRRQVEWEPASNLIEGVCLTLQRQPIISFLPHLRSLINVCVNLVMGVVGPSSVADGLPLLHLSPYLSPPLPFSTAVVRLVALQIQALKEDFPLSHVISPFTNQERREGMLLNLLIPFVLTVGSGSKDSPWLEQPEVQLLLQTVINVLLPPRIISTSRSKNFMLESSPAHCSTPGDAGKDLRREGLAESTSQAAYLALKVILVCFERQLGSQWYWLSLQVKEMALRKVGGLALWDFLDFIVRTRIPIFVLLRPFIQCKLLAQPAENHEELSARQHIADQLERRFIPRPLCKSSLIAEFNSELKILKEAVHSGSAYQGKTSISTVGTSTSAYRLSLATMSRSNTGTGTVWEQDSEPSQQASQDTLSRTDEEDEENDSVSMPSVVSEQEAYLLSTIGRRRFSSHVSSMSAPQAEVGMLPSQSEPNVLDDSQGLAAEGSLSRVASVQSEPGQQNLLLQQPLGRKRGLRQLRRPLLSRQKTQTESRNRHGARLSTTRRSIQPKTKPSVDQKRSVTFIEAQPESAGAPADTLSATGQPQGCSPAPSRKPEGMDKPVLTSSPAIVVADLHSLSPKQGESLPAEEGEKKEDTEVPGATAHSPLSAQLSDPDDFTGLETSILLQHGDTVLHISEENGMENPLLSGPYPFTPTELGETDVDLDESHV", "length": 3256, "header": "tr|F1SSS4-1|F1SSS4_PIG Isoform 1 of Unc-80 homolog, NALCN channel complex subunit OS=Sus scrofa OX=9823 GN=UNC80 PE=4 SV=5 CANONICAL=F1SSS4-1" }, "isoforms": [ { "isoform_ac": "A0A8W4F7K3-1", "url": "https://www.uniprot.org/uniprotkb/F1SSS4/entry#A0A8W4F7K3-1", "sequence": { "sequence": "MVKRKSSEGQEQDSGRGIPLPIQTFLWRQTSAFLRPKLGKQYEASCVSFERVLVENKLHGLSPALSEAIQSISRWELVQAALPHVLHCTATLLSNRNKLGHQDKLGVAETKLLHTLHWMLLEAPQDCNNERLGGTDRGSSWGGSSSGFIHQVENQGSPGQPCQSTSNDDEENNRRKIFQNSMATVELFVFLFAPLVHRIKESDLTFRLASGLVIWQPMWEHRQPEVSGFTALVKPLRNIITAKRSSPINSQSQTCESPNPDTRHREGLQVVCETFQSDSISPKATISGCHRGNSFDGSLSSQTSQERGPSHSRASLVIPPCQRSRYATYFDVAVLRCLLQPHWSEEGTQWSLMYYLQRLRHMLEEKPEKPPEPDIPLLPRPRSSSMVAAAPSLVNTHKTQDLTMKCNEEEKSLSPEAFSKVSLTNLRRSAVPDLSSDLGMNIFKKFKSRKEDRERKGSIPFHHTGKRRPRRMGVPFLLHEDHLDVSPTRSTFSFGSFSGLGEDRRGIEKGGWQTTILGKFTRRGSSDAATEMESLGARHSHSHHTLVSDLPDHSNSHGDNTVKEVRSQISTITVATFNTTLASFNVGYADFFSEHMRKLCNQVPIPEMPHEPLACANLPRSLTDSCINYSYLEDTEHIDGTNNFVHKNGMLDLSVVLKAVYLVLNHDISSRICDVALNIVECLLQLGVVPCVEKNRKKSENKENGTAEKRPSEGTFQFKGVSGSSTCGFGGPSVSGAGDGGGEEGGGADGGGGGGDGGGGGGGGGGPYEKKDKNQEKDENIPVSNHRLALTMLIKIVKSLGCAYGCGEGHRGLSGDRLRHQAQNCLTKLYKLDKMQFRQTMRDYVNKDSLNNVVDFLHALLGFCMEPVTDNKAGFGNNFTTVDNKSTAQNVEGIIVSAMFKSLITRCASTTHELHSPENLGLYCDIRQLVQFIKEAHGNVFRRVALSALLDSAEKLAPGKKVEENEPESKPGGGKRSEAGSIADKGQVTSAPEECRSFMSGRPSQTPEHDEQMQGGNLGRKDFWRKMFKSQSAASDTSSQSEQDTSECTTAHSGTTSDRRARSRSRRISLRKKLKLPIGKRNWLKRSSLSGLADGVEDLLDISSVDRLSFIRQSSKVKFTSAVKLSEGGPGSGMENGRDEEENFFKRLGCHSFDDHLSSNQDGGKSKNVVNLGAIRQGMKRFQFLLNCCEPGTIPDASILAAALDLEAPVVARAALFLECARFVHRCNRGNWPEWMKGHHVNITKKGLSRGRSPIVGNKRNQKLQWNAAKLFYQWGDAIGVRLNELCHGESESPANLLGLIYDEETKRRLRKEDEEEDFLDDSTVNPSKCGCPFALKMAACQLLLEITTFLRETFSCLPRPRTEPLVDLESCRLRLDPELDRHRYERKISFAGVLDENEDSKDSLHSSSHTLKSDAGVEEKKEGSPWSASEPSIEPEGVSTAGVEENYHRNMSWLHVMILLCNQQSFICTHVDYCHPHCYLYHSRSCARLVRAIKLLYGDTVDSLRESNSISNVALRGKKQKECSDKSCLRTPSLKKRISDANLEGKKDSGMLKYIRLQVMSLSPAPLSLLIKAAPILTEEMYGDIQPAAWELLLSMDEHMAGAAAAMFLLCAVKVPEAVSDMLTSEFHHPETVQRLNAVLKFHTLWRFRYQVWPRMEEGAQQIFKIPPPSINFTLPSPVLGMPSVPMFDPPWVPQCSGSVQDPINEDQSKSFSARAVSRSHQRAEHILKNLQQEEEKKRLGREASLITAIPITQEACYEPTCTPSAEPEEEVEEVTNLASRRLSVSPSCTSSTSHRNYSFRRGSVWSVRSAVSAEDEEHTTEHTPNHHVPQPPQAVFPACICAAVLPIVHLMEDGEVREDGVAVSAVAQQVLWNCLIEDPSTVLRHFLEKLTISNRQDELMYMLRKLLLNIGDFPAQTSHILFNYLVGLIMYFVRTPCEWGMDAISATLTFLWEVVGYVEGLFFKDLKQTMKKEQCEVKLLVTASMPGTKTLVVHGQNECDIPTQLPVHEDTQFEALLKECLEFFNIPESQSTHYFLMDKRWNLIHYNKTYVRDIYPFRRSVSPQLNLVHMHPEKGQELIQKQVFTRKLEEVGRVLFLISLTQKIPTAHKQSHVSMLQEDLLRLPSFPRSAIDAEFSLFSDPQAGKELFGLDTLQKSLWIQLLEEMFLGMPSEFPWGDEIMLFLNVFNGALILHPEDSALLRQYAATVINSAVHFNHLFSLSGYQWILPTMLQVYSDYESNPQLRQAIEFACHQFYILHRKPFVLQLFASVAPLLEFPDAANTGSSKGVSAQCLFDLLQSLEGETTDILDILELVKAEKPLKSLDFCYGNEDLTFSISEAIKLCVTVVAYAPESFRSLQMLMVLEALVPCYLQKLKRQTSQVETVPAAREEIAATAALATSLQALLYSVEVLTRPMTAPQMSRCDQGHKGATTANHTMSSGVNTRYQEQGAKLHFIRENLHLLEEGQGLPREELDERIAREEFRRPRESLLNICTEFYKHCGPRLKILQNLAGEPRVTALELLDVKSHMRLAEIAHSLLKLAPYDTQTMESRGLRRYIMEMLPITDWTAEAVRPALILILKRLDRMFNKIHKMPTLRRQVEWEPASNLIEGVCLTLQRQPIISFLPHLRSLINVCVNLVMGVVGPSSVADGLPLLHLSPYLSPPLPFSTAVVRLVALQIQALKEDFPLSHVISPFTNQERREGMLLNLLIPFVLTVGSGSKDSPWLEQPEVQLLLQTVINVLLPPRIISTSRSKNFMLESSPAHCSTPGDAGKDLRREGLAESTSQAAYLALKVILVCFERQLGSQWYWLSLQVKEMALRKVGGLALWDFLDFIVRTRIPIFVLLRPFIQCKLLAQPAENHEELSARQHIADQLERRFIPRPLCKSSLIAEFNSELKILKEAVHSGSAYQGKTSISTVGTSTSAYRLSLATMSRSNTGTGTVWEQDSEPSQQASQDTLSRTDEEDEENDSVSMPSVVSEQEAYLLSTIGRRRFSSHVSSMSAPQAEVGMLPSQRVASVQSEPGQQNLLLQQPLGRKRGLRQLRRPLLSRQKTQTESRNRHGARLSTTRRSIQPKTKPSVDQKRSVTFIEAQPESAGAPADTLSATGQPQGCSPAPSRKPEGMDKPVLTSSPAIVVADLHSLSPKQGESLPAEEGEKKEDTEVPGATAHSPLSAQLSDPDDFTGLETSILLQHGDTVLHISEENGMENPLLSGPYPFTPTELGETDVDLDESHV", "length": 3234, "header": "tr|A0A8W4F7K3-1|A0A8W4F7K3_PIG Computationally mapped isoform of Unc-80 homolog, NALCN channel complex subunit OS=Sus scrofa OX=9823 GN=UNC80 PE=4 SV=1 CANONICAL=F1SSS4-1" }, "locus": { "chromosome": "15", "start_pos": 112713882, "end_pos": 112491722, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102057.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102057.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075251.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075251.1" } ] } }, { "isoform_ac": "F1SSS4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSS4/entry#F1SSS4-1", "sequence": { "sequence": "MVKRKSSEGQEQDSGRGIPLPIQTFLWRQTSAFLRPKLGKQYEASCVSFERVLVENKLHGLSPALSEAIQSISRWELVQAALPHVLHCTATLLSNRNKLGHQDKLGVAETKLLHTLHWMLLEAPQDCNNERLGGTDRGSSWGGSSSGFIHQVENQGSPGQPCQSTSNDDEENNRRKIFQNSMATVELFVFLFAPLVHRIKESDLTFRLASGLVIWQPMWEHRQPEVSGFTALVKPLRNIITAKRSSPINSQSQTCESPNPDTRHREGLQVVCETFQSDSISPKATISGCHRGNSFDGSLSSQTSQERGPSHSRASLVIPPCQRSRYATYFDVAVLRCLLQPHWSEEGTQWSLMYYLQRLRHMLEEKPEKPPEPDIPLLPRPRSSSMVAAAPSLVNTHKTQDLTMKCNEEEKSLSPEAFSKVSLTNLRRSAVPDLSSDLGMNIFKKFKSRKEDRERKGSIPFHHTGKRRPRRMGVPFLLHEDHLDVSPTRSTFSFGSFSGLGEDRRGIEKGGWQTTILGKFTRRGSSDAATEMESLGARHSHSHHTLVSDLPDHSNSHGDNTVKEVRSQISTITVATFNTTLASFNVGYADFFSEHMRKLCNQVPIPEMPHEPLACANLPRSLTDSCINYSYLEDTEHIDGTNNFVHKNGMLDLSVVLKAVYLVLNHDISSRICDVALNIVECLLQLGVVPCVEKNRKKSENKENGTAEKRPSEGTFQFKGVSGSSTCGFGGPSVSGAGDGGGEEGGGADGGGGGGDGGGGGGGGGGPYEKKDKNQEKDENIPVSNHRLALTMLIKIVKSLGCAYGCGEGHRGLSGDRLRHQVFRENAQNCLTKLYKLDKMQFRQTMRDYVNKDSLNNVVDFLHALLGFCMEPVTDNKAGFGNNFTTVDNKSTAQNVEGIIVSAMFKSLITRCASTTHELHSPENLGLYCDIRQLVQFIKEAHGNVFRRVALSALLDSAEKLAPGKKVEENEPESKPGGGKRSEAGSIADKGQVTSAPEECRSFMSGRPSQTPEHDEQMQGGNLGRKDFWRKMFKSQSAASDTSSQSEQDTSECTTAHSGTTSDRRARSRSRRISLRKKLKLPIGNWLKRSSLSGLADGVEDLLDISSVDRLSFIRQSSKVKFTSAVKLSEGGPGSGMENGRDEEENFFKRLGCHSFDDHLSSNQDGGKSKNVVNLGAIRQGMKRFQFLLNCCEPGTIPDASILAAALDLEAPVVARAALFLECARFVHRCNRGNWPEWMKGHHVNITKKGLSRGRSPIVGNKRNQKLQWNAAKLFYQWGDAIGVRLNELCHGESESPANLLGLIYDEETKRRLRKEDEEEDFLDDSTVNPSKCGCPFALKMAACQLLLEITTFLRETFSCLPRPRTEPLVDLESCRLRLDPELDRHRYERKISFAGVLDENEDSKDSLHSSSHTLKSDAGVEEKKEGSPWSASEPSIEPEGVSTAGVEENYHRNMSWLHVMILLCNQQSFICTHVDYCHPHCYLYHSRSCARLVRAIKLLYGDTVDSLRESNSISNVALRGKKQKECSDKSCLRTPSLKKRISDANLEGKKDSGMLKYIRLQVMSLSPAPLSLLIKAAPILTEEMYGDIQPAAWELLLSMDEHMAGAAAAMFLLCAVKVPEAVSDMLTSEFHHPETVQRLNAVLKFHTLWRFRYQVWPRMEEGAQQIFKIPPPSINFTLPSPVLGMPSVPMFDPPWVPQCSGSVQDPINEDQSKSFSARAVSRSHQRAEHILKNLQQEEEKKRLGREASLITAIPITQEACYEPTCTPSAEPEEEVEEVTNLASRRLSVSPSCTSSTSHRNYSFRRGSVWSVRSAVSAEDEEHTTEHTPNHHVPQPPQAVFPACICAAVLPIVHLMEDGEVREDGVAVSAVAQQVLWNCLIEDPSTVLRHFLEKLTISNRQDELMYMLRKLLLNIGDFPAQTSHILFNYLVGLIMYFVRTPCEWGMDAISATLTFLWEVVGYVEGLFFKDLKQTMKKEQCEVKLLVTASMPGTKTLVVHGQNECDIPTQLPVHEDTQFEALLKECLEFFNIPESQSTHYFLMDKRWNLIHYNKTYVRDIYPFRRSVSPQLNLVHMHPEKGQELIQKQVFTRKLEEVGRVLFLISLTQKIPTAHKQSHVSMLQEDLLRLPSFPRSAIDAEFSLFSDPQAGKELFGLDTLQKSLWIQLLEEMFLGMPSEFPWGDEIMLFLNVFNGALILHPEDSALLRQYAATVINSAVHFNHLFSLSGYQWILPTMLQVYSDYESNPQLRQAIEFACHQFYILHRKPFVLQLFASVAPLLEFPDAANTGSSKGVSAQCLFDLLQSLEGETTDILDILELVKAEKPLKSLDFCYGNEDLTFSISEAIKLCVTVVAYAPESFRSLQMLMVLEALVPCYLQKLKRQTSQVETVPAAREEIAATAALATSLQALLYSVEVLTRPMTAPQMSRCDQGHKGATTANHTMSSGVNTRYQEQGAKLHFIRENLHLLEEGQGLPREELDERIAREEFRRPRESLLNICTEFYKHCGPRLKILQNLAGEPRVTALELLDVKSHMRLAEIAHSLLKLAPYDTQTMESRGLRRYIMEMLPITDWTAEAVRPALILILKRLDRMFNKIHKMPTLRRQVEWEPASNLIEGVCLTLQRQPIISFLPHLRSLINVCVNLVMGVVGPSSVADGLPLLHLSPYLSPPLPFSTAVVRLVALQIQALKEDFPLSHVISPFTNQERREGMLLNLLIPFVLTVGSGSKDSPWLEQPEVQLLLQTVINVLLPPRIISTSRSKNFMLESSPAHCSTPGDAGKDLRREGLAESTSQAAYLALKVILVCFERQLGSQWYWLSLQVKEMALRKVGGLALWDFLDFIVRTRIPIFVLLRPFIQCKLLAQPAENHEELSARQHIADQLERRFIPRPLCKSSLIAEFNSELKILKEAVHSGSAYQGKTSISTVGTSTSAYRLSLATMSRSNTGTGTVWEQDSEPSQQASQDTLSRTDEEDEENDSVSMPSVVSEQEAYLLSTIGRRRFSSHVSSMSAPQAEVGMLPSQSEPNVLDDSQGLAAEGSLSRVASVQSEPGQQNLLLQQPLGRKRGLRQLRRPLLSRQKTQTESRNRHGARLSTTRRSIQPKTKPSVDQKRSVTFIEAQPESAGAPADTLSATGQPQGCSPAPSRKPEGMDKPVLTSSPAIVVADLHSLSPKQGESLPAEEGEKKEDTEVPGATAHSPLSAQLSDPDDFTGLETSILLQHGDTVLHISEENGMENPLLSGPYPFTPTELGETDVDLDESHV", "length": 3256, "header": "tr|F1SSS4-1|F1SSS4_PIG Isoform 1 of Unc-80 homolog, NALCN channel complex subunit OS=Sus scrofa OX=9823 GN=UNC80 PE=4 SV=5 CANONICAL=F1SSS4-1" }, "locus": { "chromosome": "15", "start_pos": 112713882, "end_pos": 112491722, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000017586.5", "url": "https://www.ensembl.org/id/ENSSSCT00000017586.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000017112.5", "url": "https://www.ensembl.org/id/ENSSSCP00000017112.5" } ] } }, { "isoform_ac": "I3LDL4-1", "url": "https://www.uniprot.org/uniprotkb/F1SSS4/entry#I3LDL4-1", "sequence": { "sequence": "MVKRKSSEGQEQDSGRGIPLPIQTFLWRQTSAFLRPKLGKQYEASCVSFERVLVENKLHGLSPALSEAIQSISRWELVQAALPHVLHCTATLLSNRNKLGHQDKLGVAETKLLHTLHWMLLEAPQDCNNERLGGTDRGSSWGGSSSGFIHQVENQGSPGQPCQSTSNDDEENNRRKIFQNSMATVELFVFLFAPLVHRIKESDLTFRLASGLVIWQPMWEHRQPEVSGFTALVKPLRNIITAKRSSPINSQSQTCESPNPDTRHREGLQVVCETFQSDSISPKATISGCHRGNSFDGSLSSQTSQERGPSHSRASLVIPPCQRSRYATYFDVAVLRCLLQPHWSEEGTQWSLMYYLQRLRHMLEEKPEKPPEPDIPLLPRPRSSSMVAAAPSLVNTHKTQDLTMKCNEEEKSLSPEAFSKVSLTNLRRSAVPDLSSDLGMNIFKKFKSRKEDRERKGSIPFHHTGKRRPRRMGVPFLLHEDHLDVSPTRSTFSFGSFSGLGEDRRGIEKGGWQTTILGKFTRRGSSDAATEMESLGARHSHSHHTLVSDLPDHSNSHGDNTVKEVRSQISTITVATFNTTLASFNVGYADFFSEHMRKLCNQVPIPEMPHEPLACANLPRSLTDSCINYSYLEDTEHIDGTNNFVHKNGMLDLSVVLKAVYLVLNHDISSRICDVALNIVECLLQLGVVPCVEKNRKKSENKENGTAEKRPSEGTFQFKGVSGSSTCGFGGPSVSGAGDGGGEEGGGADGGGGGGDGGGGGGGGGGPYEKKDKNQEKDENIPVSNHRLALTMLIKIVKSLGCAYGCGEGHRGLSGDRLRHQVFRENAQNCLTKLYKLDKMQFRQTMRDYVNKDSLNNVVDFLHALLGFCMEPVTDNKAGFGNNFTTVDNKSTAQNVEGIIVSAMFKSLITRCASTTHELHSPENLGLYCDIRQLVQFIKEAHGNVFRRVALSALLDSAEKLAPGKKVEENEPESKPGGGKRSEAGSIADKGQVTSAPEECRSFMSGRPSQTPEHDEQMQGGNLGRKDFWRKMFKSQSAASDTSSQSEQDTSECTTAHSGTTSDRRARSRSRRISLRKKLKLPIGNWLKRSSLSGLADGVEDLLDISSVDRLSFIRQSSKVKFTSAVKLSEGGPGSGMENGRDEEENFFKRLGCHSFDDHLSSNQDGGKSKNVVNLGAIRQGMKRFQFLLNCCEPGTIPDASILAAALDLEAPVVARAALFLECARFVHRCNRGNWPEWMKGHHVNITKKGLSRGRSPIVGNKRNQKLQWNAAKLFYQWGDAIGVRLNELCHGESESPANLLGLIYDEETKRRLRKEDEEEDFLDDSTVNPSKCGCPFALKMAACQLLLEITTFLRETFSCLPRPRTEPLVDLESCRLRLDPELDRHRYERKISFAGVLDENEDSKDSLHSSSHTLKSDAGVEEKKVPSRKIRIGGSRLLQIKGTRSFQVKKGGSLSSIRRVGSLKSSKLSRQDSESEAEELQLSQSRDTVTDLEGSPWSASEPSIEPEGVSTAGVEENYHRNMSWLHVMILLCNQQSFICTHVDYCHPHCYLYHSRSCARLVRAIKLLYGDTVDSLRESNSISNVALRGKKQKECSDKSCLRTPSLKKRISDANLEGKKDSGMLKYIRLQVMSLSPAPLSLLIKAAPILTEEMYGDIQPAAWELLLSMDEHMAGAAAAMFLLCAVKVPEAVSDMLTSEFHHPETVQRLNAVLKFHTLWRFRYQVWPRMEEGAQQIFKIPPPSINFTLPSPVLGMPSVPMFDPPWVPQCSGSVQDPINEDQSKSFSARAVSRSHQRAEHILKNLQQEEEKKRLGREASLITAIPITQEACYEPTCTPSAEPEEEVEEVTNLASRRLSVSPSCTSSTSHRNYSFRRGSVWSVRSAVSAEDEEHTTEHTPNHHVPQPPQAVFPACICAAVLPIVHLMEDGEVREDGVAVSAVAQQVLWNCLIEDPSTVLRHFLEKLTISNRQDELMYMLRKLLLNIGDFPAQTSHILFNYLVGLIMYFVRTPCEWGMDAISATLTFLWEVVGYVEGLFFKDLKQTMKKEQCEVKLLVTASMPGTKTLVVHGQNECDIPTQLPVHEDTQFEALLKECLEFFNIPESQSTHYFLMDKRWNLIHYNKTYVRDIYPFRRSVSPQLNLVHMHPEKGQELIQKQVFTRKLEEVGRVLFLISLTQKIPTAHKQSHVSMLQEDLLRLPSFPRSAIDAEFSLFSDPQAGKELFGLDTLQKSLWIQLLEEMFLGMPSEFPWGDEIMLFLNVFNGALILHPEDSALLRQYAATVINSAVHFNHLFSLSGYQWILPTMLQVYSDYESNPQLRQAIEFACHQFYILHRKPFVLQLFASVAPLLEFPDAANTGSSKGVSAQCLFDLLQSLEGETTDILDILELVKAEKPLKSLDFCYGNEDLTFSISEAIKLCVTVVAYAPESFRSLQMLMVLEALVPCYLQKLKRQTSQVETVPAAREEIAATAALATSLQALLYSVEVLTRPMTAPQMSRCDQGHKGATTANHTMSSGVNTRYQEQGAKLHFIRENLHLLEEGQGLPREELDERIAREEFRRPRESLLNICTEFYKHCGPRLKILQNLAGEPRVTALELLDVKSHMRLAEIAHSLLKLAPYDTQTMESRGLRRYIMEMLPITDWTAEAVRPALILILKRLDRMFNKIHKMPTLRRQVEWEPASNLIEGVCLTLQRQPIISFLPHLRSLINVCVNLVMGVVGPSSVADGLPLLHLSPYLSPPLPFSTAVVRLVALQIQALKEDFPLSHVISPFTNQERREGMLLNLLIPFVLTVGSGSKDSPWLEQPEVQLLLQTVINVLLPPRIISTSRSKNFMLESSPAHCSTPGDAGKDLRREGLAESTSQAAYLALKVILVCFERQLGSQWYWLSLQVKEMALRKVGGLALWDFLDFIVRTRIPIFVLLRPFIQCKLLAQPAENHEELSARQHIADQLERRFIPRPLCKSSLIAEFNSELKILKEAVHSGSAYQGKTSISTVGTSTSAYRLSLATMSRSNTGTGTVWEQDSEPSQQASQDTLSRTDEEDEENDSVSMPSVVSEQEAYLLSTIGRRRFSSHVSSMSAPQAEVGMLPSQSEPNVLDDSQGLAAEGSLSRVASVQSEPGQQNLLLQQPLGRKRGLRQLRRPLLSRQKTQTESRNRHGARLSTTRRSIQPKTKPSVDQKRSVTFIEAQPESAGAPADTLSATGQPQGCSPAPSRKPEGMDKPVLTSSPAIVVADLHSLSPKQGESLPAEEGEKKEDTEVPGATAHSPLSAQLSDPDDFTGLETSILLQHGDTVLHISEENGMENPLLSGPYPFTPTELGETDVDLDESHV", "length": 3324, "header": "tr|I3LDL4-1|I3LDL4_PIG Computationally mapped isoform of Unc-80 homolog, NALCN channel complex subunit OS=Sus scrofa OX=9823 GN=UNC80 PE=4 SV=3 CANONICAL=F1SSS4-1" }, "locus": { "chromosome": "15", "start_pos": 112713882, "end_pos": 112491722, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030483.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030483.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022146.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022146.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSS4", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-2672351", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2672351", "resource": "Reactome", "description": "Stimuli-sensing channels" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "cation channel complex", "id": "GO:0034703", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034703", "evidence": [ { "database": "UniProtKB", "id": "F1SSS4", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" } ], "pmid": "" }, { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "F1SSS4", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" } ], "pmid": "" }, { "name": "sodium channel complex", "id": "GO:0034706", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034706", "evidence": [ { "database": "UniProtKB", "id": "F1SSS4", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "monoatomic cation channel activity", "id": "GO:0005261", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005261", "evidence": [ { "database": "UniProtKB", "id": "F1SSS4", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "monoatomic cation homeostasis", "id": "GO:0055080", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0055080", "evidence": [ { "database": "UniProtKB", "id": "F1SSS4", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1245, "end_pos": 1247, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1454, "end_pos": 1456, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1676, "end_pos": 1678, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1801, "end_pos": 1803, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2052, "end_pos": 2054, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2439, "end_pos": 2441, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2972, "end_pos": 2974, "annotation": "n_glycosylation_sequon" }, { "start_pos": 578, "end_pos": 580, "annotation": "n_glycosylation_sequon" }, { "start_pos": 628, "end_pos": 630, "annotation": "n_glycosylation_sequon" }, { "start_pos": 704, "end_pos": 706, "annotation": "n_glycosylation_sequon" }, { "start_pos": 883, "end_pos": 885, "annotation": "n_glycosylation_sequon" }, { "start_pos": 889, "end_pos": 891, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SSS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" }, { "id": "PF15778", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15778" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Cation channel complex component UNC80 N-terminal", "eco_id": "ECO_0000259", "start_pos": 17, "end_pos": 235, "start_aa": "Gly", "end_aa": "Pro", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SSS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" }, { "id": "PF20262", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF20262" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein UNC80 C-terminal", "eco_id": "ECO_0000259", "start_pos": 1820, "end_pos": 2907, "start_aa": "Asp", "end_aa": "Val", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1SSS4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSS4" }, { "id": "PF19424", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19424" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein UNC80 central region", "eco_id": "ECO_0000259", "start_pos": 1425, "end_pos": 1775, "start_aa": "Lys", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1245, "end_pos": 1247 }, { "start_pos": 1454, "end_pos": 1456 }, { "start_pos": 1676, "end_pos": 1678 }, { "start_pos": 1801, "end_pos": 1803 }, { "start_pos": 2052, "end_pos": 2054 }, { "start_pos": 2439, "end_pos": 2441 }, { "start_pos": 2972, "end_pos": 2974 }, { "start_pos": 578, "end_pos": 580 }, { "start_pos": 628, "end_pos": 630 }, { "start_pos": 704, "end_pos": 706 }, { "start_pos": 883, "end_pos": 885 }, { "start_pos": 889, "end_pos": 891 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"tr|F1SSL9-1|F1SSL9_PIG Isoform 1 of Coiled-coil domain containing 198 OS=Sus scrofa OX=9823 GN=CCDC198 PE=4 SV=2 CANONICAL=F1SSL9-1" }, "isoforms": [ { "isoform_ac": "A0A8W4FBW7-1", "url": "https://www.uniprot.org/uniprotkb/F1SSL9/entry#A0A8W4FBW7-1", "sequence": { "sequence": "MGLSHSKAHQRVTKVAPLQDKEEETPSAGLVDFAFTQNLEEKSSCSFSRLQDRNKALEGQLPPLRETWYGRYSAVLHVPRAMYFDIPLEQGETSIIKRHPPRRFQKLEPIDLPQVMTSERLLSQQEAARTQKAKVRGSKTWRGWATRTLMFIAGPFQVQVELKKSLHKEAKINKQRQRDHKTKKILQSIPRNDDGDSLISLPDETLNRSPGKSCNVFKQRRLVLVTNTSRNSQNAEFLEHQPRNDYCPRKTGKMETWLHEQEARGQLLWDSSSSDSDELGKFEKKPRALVRTRTERIPLFDEFFDRE", "length": 307, "header": "tr|A0A8W4FBW7-1|A0A8W4FBW7_PIG Computationally mapped isoform of Coiled-coil domain containing 198 OS=Sus scrofa OX=9823 GN=CCDC198 PE=4 SV=1 CANONICAL=F1SSL9-1" }, "locus": { "chromosome": "1", "start_pos": 186632945, "end_pos": 186597909, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096037.1", "url": 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"F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "calmodulin binding", "id": "GO:0005516", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005516", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "ATP binding", "id": "GO:0005524", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005524", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "calcium/calmodulin-dependent protein kinase activity", "id": "GO:0004683", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004683", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 12, "go_terms": [ { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "positive regulation of neuron projection development", "id": "GO:0010976", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010976", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "intracellular signal transduction", "id": "GO:0035556", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035556", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "positive regulation of transcription by RNA polymerase II", "id": "GO:0045944", "url": 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spine development", "id": "GO:0060999", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060999", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "regulation of synapse organization", "id": "GO:0050807", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050807", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "positive regulation of synapse structural plasticity", "id": "GO:0051835", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051835", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" } ], "pmid": "" }, { "name": "positive regulation of syncytium formation by plasma membrane fusion", "id": "GO:0060143", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060143", "evidence": [ { "database": "UniProtKB", "id": "F1SQF8", "url": 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"structures": [ { "pdb_id": "AF-F1SQF8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 365, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SQF8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SQF8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SQF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SQF8" }, { "id": "PS50011", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50011" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Protein kinase", "eco_id": "ECO_0000259", "start_pos": 15, "end_pos": 271, "start_aa": "Tyr", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], 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"RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZZ99", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZ99", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZZ99-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZZ99-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480QRR0", "url": "https://www.uniprot.org/uniprotkb/A0A480QRR0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480QRR0-1", "url": "https://www.uniprot.org/uniprotkb/A0A480QRR0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MASSHPPQAAVGDRLLPGGPGPSPQAEDDPGEAFEFDDSDDDEDTSAGLGVPGAAPEKEADAPLIHLDSAPTTDPDPAAAPPQTQAPVVLSNGEAVDAAFSGVHRSSWRRKSSRRIERFTFPALEEDVIYDDVPCENLDAHQSGAERNLLYEDVHRDGAPREAEDLGWSSSEFESYSEDSAEEAKPEVEPTKHRVSFQPKMTQLMKAAKSGTKDGLEKTRIAVMRKVSFLHRKDVLGDSEEEDMGLLEVSVTDIKPPAPELGPMPDGLSPQQVVRRHILGSIVQSEGSYVESLKRVLQDYRNPLMEMEPKALSVRKCQVVFFRVKEILHCHSMFQIALSSRVAEWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMSIIKKACLTKPAFLEFLKRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLAEKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIKSKERRVFLLNDMLVCANINYKPANPRGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQEGGSYDKDNVLIQHAGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMVVFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSSRGLSLQLGALVHSPVSCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRTVKSFPLAAPVLCMEYIPEPEEGESRDGEESRRAADASAGVHPTICLGLQDGSILVYSSVDTGTQCLATCRSPGLQPVLCLRHSPFHLFAGLQDGTLAAYPRSSGGIPWDLESPPVCLTVGPGPVRTLLSLEDAVWASCGSRVTVLDATSLQTQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCITSLLICQGLLWVGTDQGVIVLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPQAEEDKLDGQAHEPAPIPASHVGRELTRKKGILLQYRLRSTAHLPGPLLSVREPEPMDGSALEHSEEDGSIYEMADDPDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSAPGGSGKPAPCGETDSALLIWQVPLML", "length": 1240, "header": "tr|F1SUQ7-1|F1SUQ7_PIG Isoform 1 of Rho guanine nucleotide exchange factor 10-like protein OS=Sus scrofa OX=9823 GN=ARHGEF10L PE=4 SV=4 CANONICAL=F1SUQ7-1" }, "isoforms": [ { "isoform_ac": "A0A286ZZ99-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7/entry#A0A286ZZ99-1", "sequence": { "sequence": "MLPSGAWGKRKLRGRRLGWVRSDARGAMWARQEGLHPPYPRAVIRCPSSSSSSVSCSGDSEEEDMGLLEVSVTDIKPPAPELGPMPDGLSPQQVVRRHILGSIVQSEGSYVESLKRVLQDYRNPLMEMEPKALSVRKCQVVFFRVKEILHCHSMFQIALSSRVAEWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMSIIKKACLTKPAFLEFLKRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLAEKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIKSKERRVFLLNDMLVCANINYKGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQEGGSYDKDNVLIQHAGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMVVFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSSRGLSLQLGALVHSPVSCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRTVKSFPLAAPVLCMEYIPEPEEGESRDGEESRRAADASAGVHPTICLGLQDGSILVYSSVDTGTQCLATCRSPGLQPVLCLRHSPFHLFAGLQDGTLAAYPRSSGGIPWDLESPPVCLTVGPGPVRTLLSLEDAVWASCGSRVTVLDATSLQTQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCITSLLICQGLLWVGTDQGVIVLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPQAEEDKLDGQAHEPAPIPASHVGRELTRKKGILLQYRLRSTAHLPGPLLSVREPEPMDGSALEHSEEDGSIYEMADDPDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSAPGGSGKPAPCGETDSALLIWQVPLML", "length": 1056, "header": "tr|A0A286ZZ99-1|A0A286ZZ99_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 10-like protein OS=Sus scrofa OX=9823 GN=ARHGEF10L PE=4 SV=2 CANONICAL=F1SUQ7-1" }, "locus": { "chromosome": "6", "start_pos": 76228775, "end_pos": 76155542, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000050296.3", "url": "https://www.ensembl.org/id/ENSSSCT00000050296.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037036.2", "url": "https://www.ensembl.org/id/ENSSSCP00000037036.2" } ] } }, { "isoform_ac": "A0A480QRR0-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7/entry#A0A480QRR0-1", "sequence": { "sequence": "MASSHPPQAAVGDRLLPGGPGPSPQAEDDPGEAFEFDDSDDDEDTSAGLGVPGAAPEKEADAPLIHLDSAPTTDPDPAAAPPQTQAPVVLSNGEAVDAAFSGVHRSSWRRKSSRRIERFTFPALEEDVIYDDVPCENLDAHQSGAERNLLYEDVHRDGAPREAEDLGWSSSEFESYSEDSAEEAKPEVEPTKHRVSFQPKLSPDLTRLKERYARTKRDILALRVGGRDMQELKHKYDCKMTQLMKAAKSGTKDGLEKTRIAVMRKVSFLHRKDVLGDSEEEDMGLLEVSVTDIKPPAPELGPMPDGLSPQQVVRRHILGSIVQSEGSYVESLKRVLQDYRNPLMEMEPKALSVRKCQVVFFRVKEILHCHSMFQIALSSRVAEWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMSIIKKACLTKPAFLEFLKRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLAEKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIKSKERRVFLLNDMLVCANINYKPANPRGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQEGGSYDKDNVLIQHAGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMVVFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSSRGLSLQLGALVHSPVSCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRTVKSFPLAAPVLCMEYIPEPEEGESRDGEESRRAADASAGVHPTICLGLQDGSILVYSSVDTGTQCLATCRSPGLQPVLCLRHSPFHLFAGLQDGTLAAYPRSSGGIPWDLESPPVCLTVGPGPVRTLLSLEDAVWASCGSRVTVLDATSLQTQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCITSLLICQGLLWVGTDQGVIVLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPQAEEDKLDGQAHEPAPIPASHVGRELTRKKGILLQYRLRSTAHLPGPLLSVREPEPMDGSALEHSEEDGSIYEMADDPDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSAPGGSGKPAPCGETDSALLIWQVPLML", "length": 1279, "header": "tr|A0A480QRR0-1|A0A480QRR0_PIG Computationally mapped isoform of Rho guanine nucleotide exchange factor 10-like protein OS=Sus scrofa OX=9823 GN=ARHGEF10L PE=4 SV=1 CANONICAL=F1SUQ7-1" }, "locus": { "chromosome": "6", "start_pos": 76228775, "end_pos": 76117946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000043364.3", "url": "https://www.ensembl.org/id/ENSSSCT00000043364.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056096.3", "url": "https://www.ensembl.org/id/ENSSSCP00000056096.3" } ] } }, { "isoform_ac": "F1SUQ7-1", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7/entry#F1SUQ7-1", "sequence": { "sequence": "MASSHPPQAAVGDRLLPGGPGPSPQAEDDPGEAFEFDDSDDDEDTSAGLGVPGAAPEKEADAPLIHLDSAPTTDPDPAAAPPQTQAPVVLSNGEAVDAAFSGVHRSSWRRKSSRRIERFTFPALEEDVIYDDVPCENLDAHQSGAERNLLYEDVHRDGAPREAEDLGWSSSEFESYSEDSAEEAKPEVEPTKHRVSFQPKMTQLMKAAKSGTKDGLEKTRIAVMRKVSFLHRKDVLGDSEEEDMGLLEVSVTDIKPPAPELGPMPDGLSPQQVVRRHILGSIVQSEGSYVESLKRVLQDYRNPLMEMEPKALSVRKCQVVFFRVKEILHCHSMFQIALSSRVAEWDSTEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMSIIKKACLTKPAFLEFLKRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELETLAEKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQLIKSKERRVFLLNDMLVCANINYKPANPRGQLEISSLVPLGPKYVVKWNTALPQVQVVEVGQEGGSYDKDNVLIQHAGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGRPISFMVVFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILACCIPAFSSRGLSLQLGALVHSPVSCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRPSPRTVKSFPLAAPVLCMEYIPEPEEGESRDGEESRRAADASAGVHPTICLGLQDGSILVYSSVDTGTQCLATCRSPGLQPVLCLRHSPFHLFAGLQDGTLAAYPRSSGGIPWDLESPPVCLTVGPGPVRTLLSLEDAVWASCGSRVTVLDATSLQTQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCITSLLICQGLLWVGTDQGVIVLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRSDQEEAEGPQAEEDKLDGQAHEPAPIPASHVGRELTRKKGILLQYRLRSTAHLPGPLLSVREPEPMDGSALEHSEEDGSIYEMADDPDIWVRSRPCARDAHRKEICSVAIISGGQGYRNFGSAPGGSGKPAPCGETDSALLIWQVPLML", "length": 1240, "header": "tr|F1SUQ7-1|F1SUQ7_PIG Isoform 1 of Rho guanine nucleotide exchange factor 10-like protein OS=Sus scrofa OX=9823 GN=ARHGEF10L PE=4 SV=4 CANONICAL=F1SUQ7-1" }, "locus": { "chromosome": "6", "start_pos": 76228775, "end_pos": 76117946, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003872.4", "url": "https://www.ensembl.org/id/ENSSSCT00000003872.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003784.4", "url": "https://www.ensembl.org/id/ENSSSCP00000003784.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-193648", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-193648", "resource": "Reactome", "description": "NRAGE signals death through JNK" }, { "id": "R-SSC-416482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-416482", "resource": "Reactome", "description": "G alpha (12/13) signalling events" }, { "id": "R-SSC-8980692", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8980692", "resource": "Reactome", "description": "RHOA GTPase cycle" }, { "id": "R-SSC-9013026", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013026", "resource": "Reactome", "description": "RHOB GTPase cycle" }, { "id": "R-SSC-9013106", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013106", "resource": "Reactome", "description": "RHOC GTPase cycle" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "regulation of small GTPase mediated signal transduction", "id": "GO:0051056", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051056", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" }, { "name": "positive regulation of stress fiber assembly", "id": "GO:0051496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0051496", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" }, { "name": "actin cytoskeleton organization", "id": "GO:0030036", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030036", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" }, { "name": "SREBP signaling pathway", "id": "GO:0032933", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032933", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "guanyl-nucleotide exchange factor activity", "id": "GO:0005085", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005085", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" }, { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "F1SUQ7", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 374, "end_pos": 376, "annotation": "n_glycosylation_sequon" }, { "start_pos": 642, "end_pos": 644, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SUQ7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1240, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SUQ7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SUQ7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SUQ7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUQ7" }, { "id": "PS50010", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50010" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "DH", "eco_id": "ECO_0000259", "start_pos": 274, "end_pos": 461, "start_aa": "Val", "end_aa": "Gln", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 374, "end_pos": 376 }, { "start_pos": 642, "end_pos": 644 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1STN0-1", "uniprot_ac": "F1STN0", "uniprot_id": "F1STN0_PIG", "mass": { "chemical_mass": 52845.0, "monoisotopic_mass": 52845.0 }, "refseq": {}, "gene_names": [ { "name": "SMPDL3B", "type": "recommended", "evidence": [ { "id": "F1STN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ] } ], "protein_names": [ { "name": "Acid sphingomyelinase-like phosphodiesterase", "type": "recommended", "evidence": [ { "id": "F1STN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STN0/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Lipid-modulating phosphodiesterase. Active on the surface of macrophages and dendritic cells and strongly influences macrophage lipid composition and membrane fluidity. Acts as a negative regulator of Toll-like receptor signaling. Has in vitro phosphodiesterase activity, but the physiological substrate is unknown. Lacks activity with phosphocholine-containing lipids, but can cleave CDP-choline, and can release phosphate from ATP and ADP (in vitro).", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0#function" }, { "database": "UniProtKB", "id": "ARBA00058717", "url": "https://www.uniprot.org/uniprotkb/ARBA00058717#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SMPDL3B", "url": "https://www.uniprot.org/uniprotkb/F1STN0", "locus": { "chromosome": "6", "start_pos": 85084480, "end_pos": 85060317, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000003582", "url": "https://www.ensembl.org/id/ENSSSCG00000003582" } ] } } ], "crossref": [ { "id": "F1STN0", "url": "https://alphafold.ebi.ac.uk/entry/F1STN0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000003582", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000003582", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00842", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00842", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR004843", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004843", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR017064", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017064", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029052", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029052", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041805", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041805", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045473", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045473", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "GNFWHIT", "url": "https://omabrowser.org/oma/group/GNFWHIT/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR10340", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10340", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR10340:SF25", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10340:SF25", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00149", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00149", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF19272", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19272", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A287BQT0", "url": "https://www.uniprot.org/uniprotkb/A0A287BQT0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BQT0-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BQT0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1STN0-1", "url": "https://www.uniprot.org/uniprotkb/F1STN0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTAPGGPHVSVRQAPRMRLPVLLIFLAHWGVTRAGQGKFWHISDLHLDPDYKVSQDPLQVCPSAGSRPVLNAGPWGDYLCDSPWILINSSIYAMKEIEPKPDFILWTGDDTPHVPDEKLGEAAVLQIMERLSKLIREVFPDTQVYAALGNHDFHPKHQLPAGSNNIYNQVAELWRPWLNNESIALFKEGAFYSEKLPSGAGRIVVLNTNLYYSKNEQTANMADPSQQFQWLDDVLSNASRAGEMVYIIGHVPPGFFEKTRNKAWFREDFNKEYLKLIHKHHRVIAGQFFGHQHLDSFRMFYDDAGAPISVMFLTPGVTPWKTTLAGVVNGANNPGIRMFEYDQSTLSLKDMVTYFLNLSQANEQGTPRWEPEYRLTEAYGVDAGAGSMHAALGRIASNKDVLQRYYDYNSVSYEPQPCDEACRVEHVCALREVAFDAYAACLRDPGVAHAPCLALLLAALLGLRALLLRW", "length": 470, "header": "tr|F1STN0-1|F1STN0_PIG Isoform 1 of Acid sphingomyelinase-like phosphodiesterase OS=Sus scrofa OX=9823 GN=SMPDL3B PE=1 SV=4 CANONICAL=F1STN0-1" }, "isoforms": [ { "isoform_ac": "A0A287BQT0-1", "url": "https://www.uniprot.org/uniprotkb/F1STN0/entry#A0A287BQT0-1", "sequence": { "sequence": "MTAPGGPHVSVRQAPRMRLPVLLIFLAHWGVTRAGQGKFWHISDLHLDPDYKVSQDPLQVCPSAGSRPVLNAGPWGDYLCDSPWILINSSIYAMKEIEPKPDFILWTGDDTPHVPDEKLGEAAVLQIMERLSKLIREVFPDTQVYAALGNHDFHPKHQLPAGSNNIYNQVAELWRPWLNNESIALFKEGAFYSEKLPSGAGRIVVLNTNLYYSKNEQTANMADPSQQFQWLDDVLSNASRAGEMVYIIGHVPPGFFEKTRNKAWFREDFNKEYLKLIHKHHRVIAGQFFGHQHLDSFRMFYDDAGHGDLLLEPEPGERAGDTALGA", "length": 326, "header": "tr|A0A287BQT0-1|A0A287BQT0_PIG Computationally mapped isoform of Sphingomyelin phosphodiesterase acid like 3B OS=Sus scrofa OX=9823 GN=SMPDL3B PE=1 SV=1 CANONICAL=F1STN0-1" }, "locus": { "chromosome": "6", "start_pos": 85083923, "end_pos": 85060754, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000040647.2", "url": "https://www.ensembl.org/id/ENSSSCT00000040647.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000058987.1", "url": "https://www.ensembl.org/id/ENSSSCP00000058987.1" } ] } }, { "isoform_ac": "F1STN0-1", "url": "https://www.uniprot.org/uniprotkb/F1STN0/entry#F1STN0-1", "sequence": { "sequence": "MTAPGGPHVSVRQAPRMRLPVLLIFLAHWGVTRAGQGKFWHISDLHLDPDYKVSQDPLQVCPSAGSRPVLNAGPWGDYLCDSPWILINSSIYAMKEIEPKPDFILWTGDDTPHVPDEKLGEAAVLQIMERLSKLIREVFPDTQVYAALGNHDFHPKHQLPAGSNNIYNQVAELWRPWLNNESIALFKEGAFYSEKLPSGAGRIVVLNTNLYYSKNEQTANMADPSQQFQWLDDVLSNASRAGEMVYIIGHVPPGFFEKTRNKAWFREDFNKEYLKLIHKHHRVIAGQFFGHQHLDSFRMFYDDAGAPISVMFLTPGVTPWKTTLAGVVNGANNPGIRMFEYDQSTLSLKDMVTYFLNLSQANEQGTPRWEPEYRLTEAYGVDAGAGSMHAALGRIASNKDVLQRYYDYNSVSYEPQPCDEACRVEHVCALREVAFDAYAACLRDPGVAHAPCLALLLAALLGLRALLLRW", "length": 470, "header": "tr|F1STN0-1|F1STN0_PIG Isoform 1 of Acid sphingomyelinase-like phosphodiesterase OS=Sus scrofa OX=9823 GN=SMPDL3B PE=1 SV=4 CANONICAL=F1STN0-1" }, "locus": { "chromosome": "6", "start_pos": 85084223, "end_pos": 85060754, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000003977.6", "url": "https://www.ensembl.org/id/ENSSSCT00000003977.6" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000003886.4", "url": "https://www.ensembl.org/id/ENSSSCP00000003886.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0YAH7-1", "protein_name": "Acid sphingomyelinase-like phosphodiesterase", "gene_name": "SMPDL3B", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MQVAAMRAAALLLLLCPPALAGRFWHLTDMHWDPGYEAALAAGRRCPSGSSEAVPDAGPWGSYLCDAPWGLLSSAVSAMHRLLPRPDFVLWTGDDTPHVPNEQLGEEKVLHIIENLTSLIKQVFPDTKVYAAMGNHDFHPKNQFPGKENRIYSQTAELWRSWLNEASIPLFRAGAFYSEKLPSPDTRGRMIVLNTNLYYDQNNQTAGEEDPGGQFQWLEETLTNASKAEEMVYIVGHIPPGFFEKKRGKPWFRRDFNERYLKIVQKHHRVIAAQFFGHHHTDSFRMFYSDTGSPINVMFLAPGVTPWKTTLPGVNNGANNPGIRVIEYDADTLQVQDVVTYYLNLTRANLMAPAWEEEYRLTSAFQVPDGSTHSMQTVLERISKDAKYLQQYYEFNSVRYDLALCGETCRADHVCAIREVDFTRYEECLKANSSTSAIGSVCLLLLSLLFGICGSQQTL", "length": 459 }, "evidence": [ { "id": "F1STN0", "url": "https://omabrowser.org/oma/group/F1STN0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "P58242-1", "protein_name": "Acid sphingomyelinase-like phosphodiesterase 3b", "gene_name": "Smpdl3b", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTLLGWLIFLAPWGVAGAQLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFHPKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYYSNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGANNPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTALTRIASEPHILQRYYVYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAKLVPGFLLILTLLPSLHVLEVL", "length": 456 }, "evidence": [ { "id": "F1STN0", "url": "https://omabrowser.org/oma/group/F1STN0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q55C09-1", "protein_name": "Sphingomyelin phosphodiesterase A", "gene_name": "sgmA", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MKSIPIILLVLIGLLLASVYSHDILITEKGQKSLDKLDKAAATTLQHGENIQLSCDVCQIGASLLEDFIKKNASLTEIIKGLSDLCIASKEEQPEVCTGILNNYVPIIVDVLIQSDFTPSQLCGYFKICSATGSSESSSISNSFDNEYRQESFNKPTMKVNKKPQYKDLSNQEPLVKKFKGNDSIGYILQISDVHFDPDYKVGSNPNCGRPLCCRDGVGSAGPIGHYLCDIPFSTVELIFQHLATLTDQLDFIVWTGDNPPHNVWEQSQAQQELATATLAQVIQKTFPNTPVLPSLGNHEAYPADQYVLPNSQWLLDSIYTYWAPWLDADALELVKERGYYTSLIKPGLRVMSLNTLENDMINFYNLLPTYLKGPNNQSDWMINTLEQAQSNGEKVLIIGHIPCTVKSASTDGWCAMYEQVVGQFSDVIIGQLYGHTHYDQFSVFSDVATHTIPTGMNYIVPSLTTYQNHEPGYRIYQFDYSTNQIVNYYQYHANITEANETGALNFQLTYSAKELYNMDDLSPTSWTKVANQMKTNSTMFNSYFENLSSSPIKESCDQACQTKWICQIFGITSSEFDKCYGV", "length": 583 }, "evidence": [ { "id": "F1STN0", "url": "https://omabrowser.org/oma/group/F1STN0/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q92485-1", "protein_name": "Acid sphingomyelinase-like phosphodiesterase 3b", "gene_name": "SMPDL3B", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MRLLAWLIFLANWGGARAEPGKFWHIADLHLDPDYKVSKDPFQVCPSAGSQPVPDAGPWGDYLCDSPWALINSSIYAMKEIEPEPDFILWTGDDTPHVPDEKLGEAAVLEIVERLTKLIREVFPDTKVYAALGNHDFHPKNQFPAGSNNIYNQIAELWKPWLSNESIALFKKGAFYCEKLPGPSGAGRIVVLNTNLYYTSNALTADMADPGQQFQWLEDVLTDASKAGDMVYIVGHVPPGFFEKTQNKAWFREGFNEKYLKVVRKHHRVIAGQFFGHHHTDSFRMLYDDAGVPISAMFITPGVTPWKTTLPGVVNGANNPAIRVFEYDRATLSLKDMVTYFMNLSQANAQGTPRWELEYQLTEAYGVPDASAHSMHTVLDRIAGDQSTLQRYYVYNSVSYSAGVCDEACSMQHVCAMRQVDIDAYTTCLYASGTTPVPQLPLLLMALLGLCTLVL", "length": 455 }, "evidence": [ { "id": "F1STN0", "url": "https://omabrowser.org/oma/group/F1STN0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "hydrolase activity", "id": "GO:0016787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016787", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "zinc ion binding", "id": "GO:0008270", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008270", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "sphingomyelin phosphodiesterase activity", "id": "GO:0004767", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0004767", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "hydrolase activity, acting on glycosyl bonds", "id": "GO:0016798", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016798", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "side of membrane", "id": "GO:0098552", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0098552", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "inflammatory response", "id": "GO:0006954", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006954", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "innate immune response", "id": "GO:0045087", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045087", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "negative regulation of inflammatory response", "id": "GO:0050728", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0050728", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "negative regulation of toll-like receptor signaling pathway", "id": "GO:0034122", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034122", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" }, { "name": "sphingomyelin catabolic process", "id": "GO:0006685", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006685", "evidence": [ { "database": "UniProtKB", "id": "F1STN0", "url": "https://www.uniprot.org/uniprotkb/F1STN0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 180, "end_pos": 182, "annotation": "n_glycosylation_sequon" }, { "start_pos": 237, "end_pos": 239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 357, "end_pos": 359, "annotation": "n_glycosylation_sequon" }, { "start_pos": 88, "end_pos": 90, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1STN0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 470, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1STN0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1STN0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1STN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STN0" }, { "id": "PF00149", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00149" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Calcineurin-like phosphoesterase", "eco_id": "ECO_0000259", "start_pos": 38, "end_pos": 293, "start_aa": "Lys", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "F1STN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STN0" }, { "id": "PF19272", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF19272" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Sphingomyelin phosphodiesterase C-terminal", "eco_id": "ECO_0000259", "start_pos": 307, "end_pos": 443, "start_aa": "Pro", "end_aa": "Arg", "glycosite_overlap": "" } ], "binding_sites": [ { "evidence": [ { "id": "F1STN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STN0#function" }, { "id": "F1STN0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1STN0" }, { "id": "PIRSR036767-51", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR036767-51" } ], "binding_site_uniprot": 109, "amino_acid": "Asp", "chebi_lig_id": "CHEBI_29105", "ligand": 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"MDTAGYSKWDNKLEEVPGGHWGHWGQRSLLLAFGLVVVTVLWALVLSILFSKASTERGALLGHQDLLRTNGLGVQAQLQTVHTQLGEAKAKLLEQESALKELSERVTQGLAEAGRDRENIRSELFRELERVRFQNSSCEQCPKSWLPFQGSCYFFSAQGATWVEAQSHCEGAGAHLVIVGGLEEQGFLSRNTAGRGYWLGLRAVRRARKIQSYQWVDGVPLSFSHWNLGEPNDSLGREDCIMMLRTGMWNDAPCNSKDDSWICEKRHNC", "length": 269, "header": "tr|F6Q4R7-1|F6Q4R7_PIG Isoform 1 of C-type lectin domain family 4 member G OS=Sus scrofa OX=9823 GN=CLEC4G PE=4 SV=3 CANONICAL=F6Q4R7-1" }, "isoforms": [ { "isoform_ac": "A0A480TFI7-1", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7/entry#A0A480TFI7-1", "sequence": { "sequence": "MPRAGHLLTMDTAGYSKWDNKLEEVPGGHWGHWGQRSLLLAFGLVVVTVLWALVLSILFSKASTERGALLGHQDLLRTNASKQTATLKVLKEEVRACNSCCLGVQAQLQTVHTQLGEAKAKLLEQESALKELSERVTQGLAEAGRDRENIRSELFRELERVRFQNSSCEQCPKSWLPFQGSCYFFSAQGATWVEAQSHCEGAGAHLVIVGGLEEQGFLSRNTAGRGYWLGLRAVRRARKIQSYQWVDGVPLSFSHWNLGEPNDSLGREDCIMMLRTGMWNDAPCNSKDDSWICEKRHNC", "length": 299, "header": "tr|A0A480TFI7-1|A0A480TFI7_PIG Computationally mapped isoform of C-type lectin domain family 4 member G OS=Sus scrofa OX=9823 GN=CLEC4G PE=4 SV=1 CANONICAL=F6Q4R7-1" }, "locus": { "chromosome": "2", "start_pos": 71436171, "end_pos": 71433463, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049431.3", "url": "https://www.ensembl.org/id/ENSSSCT00000049431.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000055505.2", "url": "https://www.ensembl.org/id/ENSSSCP00000055505.2" } ] } }, { "isoform_ac": "A0A5G2R4N7-1", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7/entry#A0A5G2R4N7-1", "sequence": { "sequence": "MDTAGYSKWDNKLEEVPGGHWGHWGQRSLLLAFGLVVVTVLWALVLSILFSKASTERGALLGHQDLLRTNASKQTATLKVLKEEVRACNSCCLGVQAQLQTVHTQLGEAKAKLLEQESALKELSERVTQGLAEAGRDRENIRSELFRELERVRFQNSSCEQCPKSWLPFQGSCYFFSAQGATWVEAQSHCEGAGAHLVIVGGLEEQPLESGGTQ", "length": 214, "header": "tr|A0A5G2R4N7-1|F6Q4R7_PIG Computationally mapped isoform of C-type lectin domain family 4 member G OS=Sus scrofa OX=9823 GN=CLEC4G PE=4 SV=2 CANONICAL=F6Q4R7-1" }, "locus": { "chromosome": "2", "start_pos": 71436059, "end_pos": 71433490, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070566.2", "url": "https://www.ensembl.org/id/ENSSSCT00000070566.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069150.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069150.2" } ] } }, { "isoform_ac": "F6Q4R7-1", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7/entry#F6Q4R7-1", "sequence": { "sequence": "MDTAGYSKWDNKLEEVPGGHWGHWGQRSLLLAFGLVVVTVLWALVLSILFSKASTERGALLGHQDLLRTNGLGVQAQLQTVHTQLGEAKAKLLEQESALKELSERVTQGLAEAGRDRENIRSELFRELERVRFQNSSCEQCPKSWLPFQGSCYFFSAQGATWVEAQSHCEGAGAHLVIVGGLEEQGFLSRNTAGRGYWLGLRAVRRARKIQSYQWVDGVPLSFSHWNLGEPNDSLGREDCIMMLRTGMWNDAPCNSKDDSWICEKRHNC", "length": 269, "header": "tr|F6Q4R7-1|F6Q4R7_PIG Isoform 1 of C-type lectin domain family 4 member G OS=Sus scrofa OX=9823 GN=CLEC4G PE=4 SV=3 CANONICAL=F6Q4R7-1" }, "locus": { "chromosome": "2", "start_pos": 71436171, "end_pos": 71433490, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000014830.5", "url": "https://www.ensembl.org/id/ENSSSCT00000014830.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000014429.5", "url": "https://www.ensembl.org/id/ENSSSCP00000014429.5" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R4N7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R4N7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-198933", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-198933", "resource": "Reactome", "description": "Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A0G2JU13-1", "protein_name": "C-type lectin domain family 4, member G", "gene_name": "Clec4g", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNTGGYSKLGGVIEEAPRGQLGRWECYKERLFFLVLAFLVATVLWALILSILLSNASSQLRVLLNHQDLLRTNASKQKVMLSSLKDDVGACRNCCSVMKAQLQTTLAEFKDTQAKVMEQESNLKDLQERVTQDLAKASRDRENIRSELFRALETVKRQNSSCEQCPPSWLPFQGSCYYFSETQAIWDTAQSYCVGQGAHLVIVRDLNEQGFLSQHTRGRGYWLGLRADRRLNKIQGYRWVDGAPLTFSHWNSGEPNDSRGHEDCVMMLHSGLWNDAPCANERDGWICEKRSSC", "length": 293 }, "evidence": [ { "id": "F6Q4R7", "url": "https://omabrowser.org/oma/group/F6Q4R7/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q6UXB4-1", "protein_name": "C-type lectin domain family 4 member G", "gene_name": "CLEC4G", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MDTTRYSKWGGSSEEVPGGPWGRWVHWSRRPLFLALAVLVTTVLWAVILSILLSKASTERAALLDGHDLLRTNASKQTAALGALKEEVGDCHSCCSGTQAQLQTTRAELGEAQAKLMEQESALRELRERVTQGLAEAGRGREDVRTELFRALEAVRLQNNSCEPCPTSWLSFEGSCYFFSVPKTTWAAAQDHCADASAHLVIVGGLDEQGFLTRNTRGRGYWLGLRAVRHLGKVQGYQWVDGVSLSFSHWNQGEPNDAWGRENCVMMLHTGLWNDAPCDSEKDGWICEKRHNC", "length": 293 }, "evidence": [ { "id": "F6Q4R7", "url": "https://omabrowser.org/oma/group/F6Q4R7/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8BNX1-1", "protein_name": "C-type lectin domain family 4 member G", "gene_name": "Clec4g", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MNTGEYNKLGSAIEEVSRGQLGRWECYKQRLFFLVLALLVATVLWALILSTLLSSASSKLRVLLSHQDLLRTNASEQKMTLSSLKDDIGACRNCCSVTKAQLQTTLAEFKDIQAKLMEQESILKELQERVTQDLAKASRDRENIRSELFQALEAVKRQNSSCEQCPPSWLPFQGSCYYFSETQATWDTAQSYCGGQGAHLVIVRGLNEQGFLSQHTRGRGYWLGLRAVRHLNKIQGYRWVDGASLNFSHWNSGEPNDSRGHEDCIMMLHSGLWNDAPCTNERDGWICEKRSSCY", "length": 294 }, "evidence": [ { "id": "F6Q4R7", "url": "https://omabrowser.org/oma/group/F6Q4R7/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 8, "go_terms": [ { "name": "polysaccharide binding", "id": "GO:0030247", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030247", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "carbohydrate binding", "id": "GO:0030246", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030246", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "virus receptor activity", "id": "GO:0001618", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001618", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "fructose binding", "id": "GO:0070061", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070061", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "D-mannose binding", "id": "GO:0005537", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005537", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "pattern recognition receptor activity", "id": "GO:0038187", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0038187", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "carbohydrate derivative binding", "id": "GO:0097367", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097367", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "virus coreceptor activity", "id": "GO:0120274", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0120274", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "immune response", "id": "GO:0006955", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006955", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" }, { "name": "positive regulation of viral life cycle", "id": "GO:1903902", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903902", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "external side of plasma membrane", "id": "GO:0009897", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009897", "evidence": [ { "database": "UniProtKB", "id": "F6Q4R7", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 135, "end_pos": 137, "annotation": "n_glycosylation_sequon" }, { "start_pos": 232, "end_pos": 234, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F6Q4R7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 269, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F6Q4R7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F6Q4R7" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F6Q4R7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F6Q4R7" }, { "id": "PS50041", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50041" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "C-type lectin", "eco_id": "ECO_0000259", "start_pos": 148, "end_pos": 257, "start_aa": "Phe", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 135, "end_pos": 137 }, { "start_pos": 232, "end_pos": 234 } ] }, "class_list": [], "section_stats": [ { "table_id": 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3L5A6-1", "uniprot_ac": "I3L5A6", "uniprot_id": "I3L5A6_PIG", "mass": { "chemical_mass": 51404.0, "monoisotopic_mass": 51404.0 }, "refseq": { "ac": "XP_013846045", "name": "WAS/WASL-interacting protein family member 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013846045" }, "gene_names": [ { "name": "WIPF1", "type": "recommended", "evidence": [ { "id": "I3L5A6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5A6" } ] }, { "name": "WIPF1", "type": "synonym", "evidence": [ { "id": "XP_013846045", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013846045" } ] } ], "protein_names": [ { "name": "WAS/WASL-interacting protein family member 1", "type": "recommended", "evidence": [ { "id": "I3L5A6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5A6/entry#names_and_taxonomy" } ] }, { "name": "WAS/WASL-interacting protein family member 1", "type": "synonym", "evidence": [ { "id": "XP_013846045", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013846045" } ] }, { "name": "Wiskott-Aldrich syndrome protein-interacting protein", "type": "synonym", "evidence": [ { "id": "I3L5A6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3L5A6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3L5A6", "url": "https://www.uniprot.org/uniprotkb/I3L5A6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "WIPF1", "url": "https://www.uniprot.org/uniprotkb/I3L5A6", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000027348", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027348", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22076", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22076", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100154822", "url": "https://www.ncbi.nlm.nih.gov/gene/100154822", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003124", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003124", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR053099", "url": "https://www.ebi.ac.uk/interpro/entry/IPR053099", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100154822", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154822", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "NAFGHSQ", "url": "https://omabrowser.org/oma/group/NAFGHSQ/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3L5A6", "url": "https://www.orthodb.org/?gene=I3L5A6", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48226", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48226", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48226:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48226:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02205", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02205", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-2029482", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029482", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-5663213", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663213", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013148", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9013149", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013846045", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013846045", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AFT4", "url": "https://www.uniprot.org/uniprotkb/A0A287AFT4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AFT4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AFT4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6P4", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B6P4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B6P4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5A6", "url": "https://www.uniprot.org/uniprotkb/I3L5A6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5A6-1", "url": "https://www.uniprot.org/uniprotkb/I3L5A6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MPVPPPPAPPPPPTFALANTEKPTLNKSEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGFGGGGGIGGGGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANREGDSGGSRPPILPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRSRMPPPRPDVGAKPDNIPPPVPNTPRPVPSSLHNRGSPLAPGAPRQPSPGPTPPPFPGNRGAAFGGGSIRQSPSASSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSLHREAVPPPPPQNSKPPVPSTPRPSASSQAPPPPPPSRPGPPPLPPGSGSGGGGSDEIPRLPQRNLSLSSSSSAAPPLPSPGRSGPLPPPPTERPPPPVRDPPGRSGPLPPPPPMNRNGSTSRALPATPQLPSRSGIDSPRSGPRPPLPPDRPGAGAPPPPPPSTSIRNGFQDSSCEDEWESRFYFHPISDLPPPEPYVPTTKSYPSKLARNESRSGSNRRERGAPPLPPIPR", "length": 509, "header": "tr|I3L5A6-1|I3L5A6_PIG Isoform 1 of WAS/WASL-interacting protein family member 1 OS=Sus scrofa OX=9823 GN=WIPF1 PE=1 SV=2 CANONICAL=I3L5A6-1" }, "isoforms": [ { "isoform_ac": "A0A287AFT4-1", "url": "https://www.uniprot.org/uniprotkb/I3L5A6/entry#A0A287AFT4-1", "sequence": { "sequence": "MPVPPPPAPPPPPTFALANTEKPTLNKSEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGFGGGGGIGGGGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANREGDSGGSRPPILPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRSRMPPPRPDVGAKPDNIPPPVPNTPRPVPSSLHNRGSPLAPGAPRQPSPGPTPPPFPGNRGAAFGGGSIRQSPSASSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSLHREAVPPPPPQNSKPPVPSTPRPSASSQAPPPPPPSRPGPPPLPPGSGSGGGGSDEIPRLPQRNLSLSSSSSAAPPLPSPGRSGPLPPPPTERPPPPVRDPPGRSGPLPPPPPMNRNGSTSRALPATPQLPSRSGIDSPRSGPRPPLPPDRPGAGAPPPPPPSTSIRNGFQDSSCEDEWESRFYFHPISDLPPPEPYVPTTKSYPSKLARNESRSGSNRRERGAPPLPPIPRPPKQVS", "length": 515, "header": "tr|A0A287AFT4-1|A0A287AFT4_PIG Computationally mapped isoform of WAS/WASL-interacting protein family member 1 OS=Sus scrofa OX=9823 GN=WIPF1 PE=1 SV=1 CANONICAL=I3L5A6-1" }, "locus": { "chromosome": "15", "start_pos": 80549461, "end_pos": 80523556, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000039472.2", "url": "https://www.ensembl.org/id/ENSSSCT00000039472.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000042839.2", "url": "https://www.ensembl.org/id/ENSSSCP00000042839.2" } ] } }, { "isoform_ac": "A0A287B6P4-1", "url": "https://www.uniprot.org/uniprotkb/I3L5A6/entry#A0A287B6P4-1", "sequence": { "sequence": "MASFQANTEKPTLNKSEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGFGGGGGIGGGGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANREGDSGGSRPPILPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRSRMPPPRPDVGAKPDNIPPPVPNTPRPVPSSLHNRGSPLAPGAPRQPSPGPTPPPFPGNRGAAFGGGSIRQSPSASSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSLHREAVPPPPPQNSKPPVPSTPRPSASSQAPPPPPPSRPGPPPLPPGSGSGGGGSDEIPRLPQRNLSLSSSSSAAPPLPSPGRSGPLPPPPTERPPPPVRDPPGRSGPLPPPPPMNRNGSTSRALPATPQLPSRSGIDSPRSGPRPPLPPDRPGAGAPPPPPPSTSIRNGFQDSSCEDEWESRFYFHPISDLPPPEPYVPTTKSYPSKLARNESRIPGPGIEPVP", "length": 489, "header": "tr|A0A287B6P4-1|A0A287B6P4_PIG Computationally mapped isoform of WAS/WASL interacting protein family member 1 OS=Sus scrofa OX=9823 GN=WIPF1 PE=1 SV=1 CANONICAL=I3L5A6-1" }, "locus": { "chromosome": "15", "start_pos": 80544644, "end_pos": 80528020, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000062056.2", "url": "https://www.ensembl.org/id/ENSSSCT00000062056.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052192.2", "url": "https://www.ensembl.org/id/ENSSSCP00000052192.2" } ] } }, { "isoform_ac": "I3L5A6-1", "url": "https://www.uniprot.org/uniprotkb/I3L5A6/entry#I3L5A6-1", "sequence": { "sequence": "MPVPPPPAPPPPPTFALANTEKPTLNKSEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPKGAGAGGGFGGGGGIGGGGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANREGDSGGSRPPILPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRSRMPPPRPDVGAKPDNIPPPVPNTPRPVPSSLHNRGSPLAPGAPRQPSPGPTPPPFPGNRGAAFGGGSIRQSPSASSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSLHREAVPPPPPQNSKPPVPSTPRPSASSQAPPPPPPSRPGPPPLPPGSGSGGGGSDEIPRLPQRNLSLSSSSSAAPPLPSPGRSGPLPPPPTERPPPPVRDPPGRSGPLPPPPPMNRNGSTSRALPATPQLPSRSGIDSPRSGPRPPLPPDRPGAGAPPPPPPSTSIRNGFQDSSCEDEWESRFYFHPISDLPPPEPYVPTTKSYPSKLARNESRSGSNRRERGAPPLPPIPR", "length": 509, "header": "tr|I3L5A6-1|I3L5A6_PIG Isoform 1 of WAS/WASL-interacting protein family member 1 OS=Sus scrofa OX=9823 GN=WIPF1 PE=1 SV=2 CANONICAL=I3L5A6-1" }, "locus": { "chromosome": "15", "start_pos": 80549461, "end_pos": 80524009, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028507.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028507.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019205.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019205.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 218, "start_aa": "Thr", "end_pos": 218, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr218", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 255, "start_aa": "Thr", "end_pos": 255, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr255", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L5A6", "url": "https://www.uniprot.org/uniprotkb/I3L5A6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100154822", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100154822", "resource": "KEGG Pathway" }, { "id": "R-SSC-2029482", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-2029482", "resource": "Reactome", "description": "Regulation of actin dynamics for phagocytic cup formation" }, { "id": "R-SSC-5663213", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5663213", "resource": "Reactome", "description": "RHO GTPases Activate WASPs and WAVEs" }, { "id": "R-SSC-9013148", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013148", "resource": "Reactome", "description": "CDC42 GTPase cycle" }, { "id": "R-SSC-9013149", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9013149", "resource": "Reactome", "description": "RAC1 GTPase cycle" } ], "orthologs": [ { 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"categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003480606", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003480606", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VGR1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGR1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VGR1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGR1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SP56", "url": "https://www.uniprot.org/uniprotkb/F1SP56", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SP56-1", "url": "https://www.uniprot.org/uniprotkb/F1SP56-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLALRSGLARALSPRTLAPQVCSSFATGPRQYDRTFYEFRTYCLKPSKMNEFLEEVKKNIHLRTAHSELIGFWTVEFGGRMNKVFHIWKYDNFAHRSQVRGEAVAKDKEWQEKFLIPNLAHIYKQEIEITYLVPWCKLEKPPKEGVYELVIFQMKPGGPALWGDAFKRAVNAHVDLGYSKLVGVFHTEYGALNRVHVLWWHESADSRAAGRHQSHEDPRVVAAVRESVNYLVSQQNMFLIPTSYSPLK", "length": 248, "header": "tr|F1SP56-1|F1SP56_PIG Isoform 1 of Nipsnap homolog 3B OS=Sus scrofa OX=9823 GN=LOC100739365 PE=1 SV=4 CANONICAL=F1SP56-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VGR1-1", "url": "https://www.uniprot.org/uniprotkb/F1SP56/entry#A0A4X1VGR1-1", "sequence": { "sequence": "MEYGLNKVCSSFATGPRQYDRTFYEFRTYCLKPSKMNEFLEEVKKNIHLRTAHSELIGFWTVEFGGRMNKVFHIWKYDNFAHRSQVRGEAVAKDKEWQEKFLIPNLAHIYKQEIEITYLVPWCKLEKPPKEGVYELVIFQMKPGGPALWGDAFKRAVNAHVDLGYSKLVGVFHTEYGALNRVHVLWWHESADSRAAGRHQSHEDPRVVAAVRESVNYLVSQQNMFLIPTSYSPLK", "length": 235, "header": "tr|A0A4X1VGR1-1|F1SP56_PIG Computationally mapped isoform of Nipsnap homolog 3B OS=Sus scrofa OX=9823 GN=LOC100739365 PE=1 SV=1 CANONICAL=F1SP56-1" }, "locus": { "chromosome": "1", "start_pos": 246139590, "end_pos": 246132630, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052222.3", "url": "https://www.ensembl.org/id/ENSSSCT00000052222.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000036079.1", "url": "https://www.ensembl.org/id/ENSSSCP00000036079.1" } ] } }, { "isoform_ac": "F1SP56-1", "url": "https://www.uniprot.org/uniprotkb/F1SP56/entry#F1SP56-1", "sequence": { "sequence": "MLALRSGLARALSPRTLAPQVCSSFATGPRQYDRTFYEFRTYCLKPSKMNEFLEEVKKNIHLRTAHSELIGFWTVEFGGRMNKVFHIWKYDNFAHRSQVRGEAVAKDKEWQEKFLIPNLAHIYKQEIEITYLVPWCKLEKPPKEGVYELVIFQMKPGGPALWGDAFKRAVNAHVDLGYSKLVGVFHTEYGALNRVHVLWWHESADSRAAGRHQSHEDPRVVAAVRESVNYLVSQQNMFLIPTSYSPLK", "length": 248, "header": "tr|F1SP56-1|F1SP56_PIG Isoform 1 of Nipsnap homolog 3B OS=Sus scrofa OX=9823 GN=LOC100739365 PE=1 SV=4 CANONICAL=F1SP56-1" }, "locus": { "chromosome": "1", "start_pos": 246139590, "end_pos": 246129563, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005965.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005965.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005817.4", "url": "https://www.ensembl.org/id/ENSSSCP00000005817.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1VGR1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VGR1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100739365", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100739365", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "mitophagy", "id": "GO:0000423", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000423", "evidence": [ { "database": "UniProtKB", "id": "F1SP56", "url": "https://www.uniprot.org/uniprotkb/F1SP56" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SP56-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 248, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SP56-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SP56" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SP56", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SP56" }, { "id": "PF07978", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07978" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "NIPSNAP", "eco_id": "ECO_0000259", "start_pos": 37, "end_pos": 137, "start_aa": "Tyr", "end_aa": "Lys", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 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"XP_020923526", "name": "phosphoinositide 3-kinase regulatory subunit 6 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923526" }, "gene_names": [ { "name": "PIK3R6", "type": "recommended", "evidence": [ { "id": "F1SSA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSA3" } ] }, { "name": "PIK3R6", "type": "synonym", "evidence": [ { "id": "XP_020923526", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923526" } ] } ], "protein_names": [ { "name": "Phosphoinositide-3-kinase regulatory subunit 6", "type": "synonym", "evidence": [ { "id": "F1SSA3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SSA3/entry#names_and_taxonomy" } ] }, { "name": "phosphoinositide 3-kinase regulatory subunit 6 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020923526", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923526" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SSA3", "url": "https://www.uniprot.org/uniprotkb/F1SSA3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PIK3R6", "url": "https://www.uniprot.org/uniprotkb/F1SSA3", "locus": { "chromosome": "12", "start_pos": 53906511, "end_pos": 53964514, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000017990", "url": "https://www.ensembl.org/id/ENSSSCG00000017990" } ] } } ], "crossref": [ { "id": "ENSSSCG00000017990", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000017990", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100034246", "url": "https://www.ncbi.nlm.nih.gov/gene/100034246", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR019522", "url": "https://www.ebi.ac.uk/interpro/entry/IPR019522", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024989", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024989", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "MPACWDG", "url": "https://omabrowser.org/oma/group/MPACWDG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR15593", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15593", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15593:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15593:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF10486", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF10486", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF12832", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12832", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-114604", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114604", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-1257604", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1257604", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-1660499", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660499", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-389357", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-389357", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-392451", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-392451", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-6811558", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811558", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9927354", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9927354", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020923526", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020923526", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2RF12", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF12", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RF12-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF12-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSA3", "url": "https://www.uniprot.org/uniprotkb/F1SSA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SSA3-1", "url": "https://www.uniprot.org/uniprotkb/F1SSA3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESSDVELDLQRSVQAVLRELSAQAPALQSNQGMCRWSLHKKVERDPGKSPALVRILLRELEKAEREDTRHVILPLLHTLMYVLTKATGIPEELHRSTYAFCTRLLTLPAPYCTVALDCAIRLKTETAVPGTLYQRLVIAEQNLRSELYPYQERVFLFVDPELVSPSVCSALLLELQAAQEQQTPEACMRHVVSHALQAALGEACQAGALQKRLQASPRRTLERYFHAVVTAVEQMASEPSPSREGHLERLEEIYCSLLGPAAAARGRGDGGSVQDRPPSIPLPSPSITFHLWTHEEQLWKELVLFLRPHSHLRLSADLEALDLQGLGPDWEMARASVLSTDSGIERDLPSGADELPGSPEMERAGLQRKGGIKKRLWPPNILMPSGWDGPSGLHRRTGQPSGDGELLPGVSRLHTARVLVLGDDRMLGRLARAYHSLRKRETQKFCLTPRLSLQLYYIPVLAPEKPAASRHSELGELAAFLGRADPWFESIVNTLCPAIHKLAEMPLSLDTSQTVDPFILDVITYYVRMGAQPIYFQIYMVKIFFSDLSQDPVEDIFLTELKVKMQDSKFPKEGCSPRRRGVAEGPGAELFICYQKALLSHRAREVTVSLRATGLVLKALPDSGTEVSGPTHWSPAAAPLTDMCLNVSVTEVIKSSNLAGRSFSTVTNTFRTANIQIQSQDQKLLTLTLDKDGQRTFKDVVRFEVAPCPEPCSRAQKPKASWLSSHGQEMERTKAKAKPLLMPINTFSGIVQ", "length": 753, "header": "tr|F1SSA3-1|F1SSA3_PIG Isoform 1 of Phosphoinositide-3-kinase regulatory subunit 6 OS=Sus scrofa OX=9823 GN=PIK3R6 PE=4 SV=3 CANONICAL=F1SSA3-1" }, "isoforms": [ { "isoform_ac": "A0A5G2RF12-1", "url": 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"MESSDVELDLQRSVQAVLRELSAQAPALQSNQGMCRWSLHKKVERDPGKSPALVRILLRELEKAEREDTRHVILPLLHTLMYVLTKATGIPEELHRSTYAFCTRLLTLPAPYCTVALDCAIRLKTETAVPGTLYQRLVIAEQNLRSELYPYQERVFLFVDPELVSPSVCSALLLELQAAQEQQTPEACMRHVVSHALQAALGEACQAGALQKRLQASPRRTLERYFHAVVTAVEQMASEPSPSREGHLERLEEIYCSLLGPAAAARGRGDGGSVQDRPPSIPLPSPSITFHLWTHEEQLWKELVLFLRPHSHLRLSADLEALDLQGLGPDWEMARASVLSTDSGIERDLPSGADELPGSPEMERAGLQRKGGIKKRLWPPNILMPSGWDGPSGLHRRTGQPSGDGELLPGVSRLHTARVLVLGDDRMLGRLARAYHSLRKRETQKFCLTPRLSLQLYYIPVLAPEKPAASRHSELGELAAFLGRADPWFESIVNTLCPAIHKLAEMPLSLDTSQTVDPFILDVITYYVRMGAQPIYFQIYMVKIFFSDLSQDPVEDIFLTELKVKMQDSKFPKEGCSPRRRGVAEGPGAELFICYQKALLSHRAREVTVSLRATGLVLKALPDSGTEVSGPTHWSPAAAPLTDMCLNVSVTEVIKSSNLAGRSFSTVTNTFRTANIQIQSQDQKLLTLTLDKDGQRTFKDVVRRREPSYRTGKALSLVGSDARLILLALTVLLIGAATSAVQNFLFWHMKDHGSSELVMGFSVALGLLGEILLHPFKTPLLRKLSKVGTVGLGLGCLAGQLLYYSFLWSWWSVLPVQIFSAISHGALWWAVGASIEDLATPGTERPLHAMFRGHFYGGGASLGSFVGGFVGMRFGLAVLYQACCVVLWLWLALFLSIRPRLPRERKINYSKLLAVEASDTSDSEQGTERDWLVKAMRDEPSD", "length": 942, "header": "tr|A0A5G2RF12-1|A0A5G2RF12_PIG Computationally mapped isoform of Phosphoinositide-3-kinase regulatory subunit 6 OS=Sus scrofa OX=9823 GN=PIK3R6 PE=4 SV=1 CANONICAL=F1SSA3-1" }, "locus": { "chromosome": "12", "start_pos": 53946385, "end_pos": 53906761, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000089805.2", "url": "https://www.ensembl.org/id/ENSSSCT00000089805.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000073307.1", "url": "https://www.ensembl.org/id/ENSSSCP00000073307.1" } ] } }, { "isoform_ac": "F1SSA3-1", "url": "https://www.uniprot.org/uniprotkb/F1SSA3/entry#F1SSA3-1", "sequence": { "sequence": "MESSDVELDLQRSVQAVLRELSAQAPALQSNQGMCRWSLHKKVERDPGKSPALVRILLRELEKAEREDTRHVILPLLHTLMYVLTKATGIPEELHRSTYAFCTRLLTLPAPYCTVALDCAIRLKTETAVPGTLYQRLVIAEQNLRSELYPYQERVFLFVDPELVSPSVCSALLLELQAAQEQQTPEACMRHVVSHALQAALGEACQAGALQKRLQASPRRTLERYFHAVVTAVEQMASEPSPSREGHLERLEEIYCSLLGPAAAARGRGDGGSVQDRPPSIPLPSPSITFHLWTHEEQLWKELVLFLRPHSHLRLSADLEALDLQGLGPDWEMARASVLSTDSGIERDLPSGADELPGSPEMERAGLQRKGGIKKRLWPPNILMPSGWDGPSGLHRRTGQPSGDGELLPGVSRLHTARVLVLGDDRMLGRLARAYHSLRKRETQKFCLTPRLSLQLYYIPVLAPEKPAASRHSELGELAAFLGRADPWFESIVNTLCPAIHKLAEMPLSLDTSQTVDPFILDVITYYVRMGAQPIYFQIYMVKIFFSDLSQDPVEDIFLTELKVKMQDSKFPKEGCSPRRRGVAEGPGAELFICYQKALLSHRAREVTVSLRATGLVLKALPDSGTEVSGPTHWSPAAAPLTDMCLNVSVTEVIKSSNLAGRSFSTVTNTFRTANIQIQSQDQKLLTLTLDKDGQRTFKDVVRFEVAPCPEPCSRAQKPKASWLSSHGQEMERTKAKAKPLLMPINTFSGIVQ", "length": 753, "header": "tr|F1SSA3-1|F1SSA3_PIG Isoform 1 of Phosphoinositide-3-kinase regulatory subunit 6 OS=Sus scrofa OX=9823 GN=PIK3R6 PE=4 SV=3 CANONICAL=F1SSA3-1" }, "locus": { "chromosome": "12", "start_pos": 53946385, "end_pos": 53911526, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000019577.5", "url": "https://www.ensembl.org/id/ENSSSCT00000019577.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019058.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019058.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SSA3", "url": "https://www.uniprot.org/uniprotkb/F1SSA3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-114604", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-114604", "resource": "Reactome", "description": "GPVI-mediated activation cascade" }, { "id": "R-SSC-1257604", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1257604", "resource": "Reactome", "description": "PIP3 activates AKT signaling" }, { "id": "R-SSC-1660499", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-1660499", "resource": "Reactome", "description": "Synthesis of PIPs at the plasma membrane" }, { "id": "R-SSC-389357", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-389357", "resource": "Reactome", "description": "CD28 dependent PI3K/Akt signaling" }, { "id": "R-SSC-392451", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-392451", "resource": "Reactome", "description": "G beta:gamma signalling through PI3Kgamma" }, { "id": "R-SSC-6811558", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6811558", "resource": "Reactome", "description": "PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling" }, { "id": "R-SSC-9927354", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9927354", "resource": "Reactome", "description": "Co-stimulation by ICOS" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6G942-1", "protein_name": "Phosphoinositide-3-kinase, regulatory subunit 6", "gene_name": "Pik3r6", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPVLCCVTRFSQQLEAGSVLPFSPGETPQGSRPEALHRASKENNLCVETTILLSTLLLETTTSFPYRTGSMESSDVELDFQRSVQAVLRELNTPNPALQSNQGMWRWSLHKKMERNPGKSSVLVRILLRELEKAESEDARRVIIPLLLTLMSVLTKATGITEDLYHRAYTFCTRLLTLPAPYSTVALDCAIRLKTETAVPGTLYQRTVIAEQNLISELYPYQERVFLFVDPELVSASVCSALLLEIQAAQEQQTPEACMRHVVSHALQAALGEACHTGALNRKLQASSRRVLEYYFHAVVAAIEQVASEDSPSRLGHLERMEEIYCSLLGTATTRRRCVGDLLQDRLPSIPLPSPYITFHLWTDQEQLWKELVLFLRPRSQLRLSADLDALDLQGFRPDRDLARVSTDSGIERDLPLGNDELPDPSSSEMERAALQRKGGIKKRVWPPDFFMPGSWDGPPGLHRRTGRPSGDGELLPGVSRVHTARVLVLGDDRMVGRLAQAYYRLRKRETKKFCLTPRLSLQFYYIPVLAPQGTGQDPEASRKPELGELASFLGRVDPWYESTVNTLCPAILKLAEMPPCLDTSRTVDPFILDVITYYVRMGTQPIYFQLYKVKIFTNLSHDPIEDIFLMELKVKTQDSKSPKEGSSPRRRGAAEGTGAELSMCYQKALLSHRPRKVTVSLRATGLVLKAIPAGDTEVSGFSHCTSPNAASAADCSCLHVSVTEVVKTSNLAGRSFTTSTNTFRTSSIQVQSQDQRLLTLWLDKDGRRTFRDVVRFEAGPCPEPCSRAQKSKMSAFNSHGQETEKSMTKPNSLLMPINTFSGIIQ", "length": 826 }, "evidence": [ { "id": "F1SSA3", "url": "https://omabrowser.org/oma/group/F1SSA3/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M3B0F5-1", "protein_name": "Phosphoinositide 3-kinase regulatory subunit 6 isoform X1", "gene_name": "pik3r6", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MASWKNSCSINVVADEYAAIESEIYRSLQTILREMDAEQTVVNKGMLRWTLHKKVQDSSLRSLALVKVTIKELERAERTDCKKHLIPLLNTLIYAVMQTVYMPDDLYKRVYDFCKRLLTLPQPYCTVGLSYAGQMKTERFSPGILYQRRIIAEQNLRNEHYPQQERVFVFADPAVFSESLSNILKADIETQGMFRNPLNMMRWAVQHSLQAVLGEDCDGPTLNDALQDMELDVESYFNEVLAAVEQSTDVNRGERGQIRQKLHELYRQILRYSSKGLLSGSLCNVPLPNPEMSFHLWWEEEELWRELAKFIRSGSGSYSESLSLNPDEFYMSDLPTDLNSEMPRHSVMSTDSGIERDLQGPDTSDMEFIGGRSLNKAEQTCGRLSRRGGIKVKPSITDSMALMQDVLEETGSTGSTGTLQRRAGSSGTTLHKEERDYTAKIVVMGDDRVLGRLARAYYWLRKREARRRFLTMKVNLQMYYIPVARDSSASSPVRENLPSKSINICALGSYLGMVDPWYECNVCSLGQMIPDFARTSSIGKPQEPDLFLADIISYYVRMGQQPVYFNIYYIKIYFSHREAVEEVFVTGLEVDFPEFKTNKDTSKQKKMPPELCGALISFSYLKVSLSNREVEKGFSLRTTGAQISAIPQNKTEDLNCLAVTFNDTKPKSNTELKIRTCSFKLKTPEKTTFSVCLDKDFRRKFMDVESIEVTSCRDPGYYVQKSLKSKFMTEDADAGLSKYMSKGLTLSINTFAGIID", "length": 756 }, "evidence": [ { "id": "F1SSA3", "url": "https://omabrowser.org/oma/group/F1SSA3/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3U6Q4-1", "protein_name": "Phosphoinositide 3-kinase regulatory subunit 6", "gene_name": "Pik3r6", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MESSDVELDFQRSVQAVLRELNTPNPALQSNQGMWRWSLHKKVERNPGKSSILVRILLRELEKAESEDGRRVIIPLLLTLMSVLTKATGIPEDLYHRAYTFCTRLLTLPAPYSTVALDCAIRLKTETAVPGTLYQRTVIAEQNLISELYPYQERVFLFVDPELVSASVCSALLLEIQAAQEQQTPEACMRHVVSHALQAALGEACHTGALNRKLQASSRRVLEYYFHAVVAAIEQVASEDSPSRLGHLEKMEEIYCSLLGPATTRRHCVGDLLQDRLPSIPLPSPYITFHLWTDQEQLWKELVLFLRPRSQLRLSADLDALDLQGFRLDRDLARVSTDSGIERDLPLGSDELPDPSSSEMERAALQRKGGIKKRVWPPDFFMPGSWDGPPGLHRRTGRPSGDGELLPGVSRVHTARVLVLGDDRMLGRLAQAYYRLRKRETKKFCLTPRLSLQLYYIPVLAPQVTGQDPEASRKPELGELASFLGRVDPWYESTVNTLCPAILKLAEMPPYLDTSRTVDPFILDVITYYVRMGTQPIYFQLYKVKIFTSLSHDPTEDIFLTELKVKIQDSKSPKEGSSPRRRGAAEGTGAELSMCYQKALLSHRPREVTVSLRATGLVLKAIPAGDTEVSGFFHCTSPNAASATDCSCLHVSVTEVVKSSNLAGRSFTTSTNTFRTSSIQVQSQDQRLLTLWLDKDGRRTFRDVVRFEVSPCPEPCSRTQKSKTSALNSHGQETEKNMAKPNSLLMPINTFSGIIQ", "length": 756 }, "evidence": [ { "id": "F1SSA3", "url": "https://omabrowser.org/oma/group/F1SSA3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q5UE93-1", "protein_name": 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"evidence": [ { "database": "UniProtKB", "id": "F1SSA3", "url": "https://www.uniprot.org/uniprotkb/F1SSA3" } ], "pmid": "" }, { "name": "1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity", "id": "GO:0046934", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046934", "evidence": [ { "database": "UniProtKB", "id": "F1SSA3", "url": "https://www.uniprot.org/uniprotkb/F1SSA3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 647, "end_pos": 649, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], 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"url": "https://www.ensembl.org/id/ENSSSCG00000053029" } ] } } ], "crossref": [ { "id": "ENSSSCG00000005126", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000005126", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100511909", "url": "https://www.ncbi.nlm.nih.gov/gene/100511909", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR038991", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038991", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100511909", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511909", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "QVPEKKD", "url": "https://omabrowser.org/oma/group/QVPEKKD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "F1SP80", "url": "https://www.orthodb.org/?gene=F1SP80", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR14740", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14740", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR14740:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR14740:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF15335", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF15335", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003121922", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003121922", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "F1SP80", "url": "https://www.uniprot.org/uniprotkb/F1SP80", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SP80-1", "url": "https://www.uniprot.org/uniprotkb/F1SP80-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTGKKSSREKRRKRSGQEAAAALAAPELVPAVAGSGSGSTSGCGSASGCGSVTCCGNTSFSGSVTGTGSGGSCWGGSGVERSERRKRRSTDSSSSVSGSLQQEAKYLLPTLDKELFLAEHSDLEEGGLDLTVALKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNAVDSDMEEEADDGSKMGSELVSQQDICTDSTSSLKENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEVPENTVQSEAGQIDDLEKDIEKSVNEILGLAESSPKEPKAATLTVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKPA", "length": 362, "header": "tr|F1SP80-1|F1SP80_PIG Isoform 1 of Caspase activity and apoptosis inhibitor 1 OS=Sus scrofa OX=9823 GN=CAAP1 PE=4 SV=1 CANONICAL=F1SP80-1" }, "isoforms": [ { "isoform_ac": "F1SP80-1", "url": "https://www.uniprot.org/uniprotkb/F1SP80/entry#F1SP80-1", "sequence": { "sequence": "MTGKKSSREKRRKRSGQEAAAALAAPELVPAVAGSGSGSTSGCGSASGCGSVTCCGNTSFSGSVTGTGSGGSCWGGSGVERSERRKRRSTDSSSSVSGSLQQEAKYLLPTLDKELFLAEHSDLEEGGLDLTVALKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNAVDSDMEEEADDGSKMGSELVSQQDICTDSTSSLKENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEVPENTVQSEAGQIDDLEKDIEKSVNEILGLAESSPKEPKAATLTVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKPA", "length": 362, "header": "tr|F1SP80-1|F1SP80_PIG Isoform 1 of Caspase activity and apoptosis inhibitor 1 OS=Sus scrofa OX=9823 GN=CAAP1 PE=4 SV=1 CANONICAL=F1SP80-1" }, "locus": { "chromosome": "1", "start_pos": 196272706, "end_pos": 196229619, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000005652.5", "url": "https://www.ensembl.org/id/ENSSSCT00000005652.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000005511.2", "url": "https://www.ensembl.org/id/ENSSSCP00000005511.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SP80", "url": "https://www.uniprot.org/uniprotkb/F1SP80" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100511909", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100511909", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0AC58FX91-1", "protein_name": "Caspase activity and apoptosis inhibitor 1 isoform X1", "gene_name": "caap1", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MQEGKKREKEKKRSHCDRELDDGQMKRRKSGPSMEECRQPLEPPEGPQEPSELEDGGLDLSRSFKPISGYMQERREMLEQCFSVLGENKLQEMLPDGLKDCSLNEIKKLCWDQLLQISDIHLLEILDGKELSVLAAPEQKSCTDSQQDSNVDSTSSLRDNPDTEEKQGKINTYQRSTPQFPARFVCLCFCVCAFVCFIYLCVLFVCVVCVSVFVCFIYLCVLFICACVCVCVFVCAFVCLSICVCMCVCLCVFVCAFVCVMFVCVYVCVCVSVCAFVCFIYLCVCVCLFLCVLLCFVCVCVCFCVCFLFLSICVCACVYVCVCVFVCACVFYLCVCVCVLLCVLFVCVCVCVCVCVCVCVLLCVLCVCVCVCVCVLCVLFVFLSICVLFVCVRVCLCFCVCLCVLFVCVCVCAFVCFVCVCVCVCVCVCVCFVCAFCFICVCACVSVCIFVCVCVWGGVVNVCICFFHLHVCV", "length": 473 }, "evidence": [ { "id": "F1SP80", "url": "https://omabrowser.org/oma/group/F1SP80/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "E1BSD0-1", "protein_name": "Caspase activity and apoptosis inhibitor 1", "gene_name": "CAAP1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPGRKSSKEKKRRRSRSCCPDGAAGGDRKRRSAESGRAAPEEEKCNVPSGEKVEEPEQFSDVEEGGLDLSVSLKPVSFYIADKKEMLQQCFCVIGEKKLQKMLPDILKSCSMDEIKRLCLEQLEMLSEKKLLKILEGKSGADSDTDEDGDGEDKTGGESVSQQDNSIDSTSSLREDKLEGQESKQGKGEDSDVLSINADAYDSDIEGPCDEEGSPDMQEDTVRSGAGQIDDLQKDIEKSVNEILGLAESSPKESKAASLAVPPLEDVQPSAQQLELLELEMRARAIKALMKAGDVKKQP", "length": 299 }, "evidence": [ { "id": "F1SP80", "url": "https://omabrowser.org/oma/group/F1SP80/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3V6Y7-1", "protein_name": "Caspase activity and apoptosis inhibitor 1", "gene_name": "Caap1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTGKKSSREKRRKRSGQEAAAALAAPDLVPVLSGSAGGCGSVGCCGVAGGGTSVAGGAERSERRKRRSTDSSSSVSGSLQQETKYLLPSLEKELILAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEQKLQKMLPDVLKNCSVEEIKKLCQEQLELLSEKKILKILEGDNGLDSDMEEEADRGSKVAPDLISQQDTCVDSTSSLRENKQPEGLESKQGKGEDSDVLSINADAYDSDIEGPSNEEAAASATAAPTATAVATAASASEVPGGTVQSEAAQIDDLERDIEKSVNEILGLVESSPKEPKAAILTVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKPV", "length": 358 }, "evidence": [ { "id": "F1SP80", "url": "https://omabrowser.org/oma/group/F1SP80/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q2T9W9-1", "protein_name": "Caspase activity and apoptosis inhibitor 1", "gene_name": "CAAP1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MTGKKSSREKRRKRSGQEAAAALAAPDLVPAVGGSGSGSTSGCGSASGCGSVTCCGNTSVSGSVTGGGSGGSCWGGSSVERGERRKRRSTDSSSSVSGSLQQEAKYLLPPLEKELFLAEHSDLEEGGLDLTVALKPVSFYISDKKEMLRQCFCIIGEKKLQKMLPDVLKNCSIEEIKRLCQEQLELLSEKKILKILEGDNGMDSEMEEEADDGSKMVSDVVNQQDSCVDSTSSLRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEVPENTVQSEAGQIDDLEKDIEKSVNEILGLAESSPKEPKAATLTVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKPA", "length": 362 }, "evidence": [ { "id": "F1SP80", "url": "https://omabrowser.org/oma/group/F1SP80/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q8VDY9-1", "protein_name": "Caspase activity and apoptosis inhibitor 1", "gene_name": "Caap1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTGKKSSREKRRKRSGQEAAASLAAPDLVPVLSGSAGGCGSGGCCGVAGGGTSVAGGAERSERRKRRSTDSSSSVSGSLQQETKYLLPSLEKELFLAEHSDLEEGGLDLNVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSVEEIKKLCQEQLELLSEKQILKILEGDNGLDSDMEEEADDGCKVAPDLISQQDTCVDSTSSLRENKQPEVLESKQGKGEDSDVLSINADAYDSDIEGPSIDEAAAAATATPAATAVATAASEVPENTVQSEAGQIDDLERDIEKSVNEILGLAESSPKEPKVATLTVPPAEDVQPSAQQLELLELEMRARAIKALMKAGDIKKPV", "length": 356 }, "evidence": [ { "id": "F1SP80", "url": "https://omabrowser.org/oma/group/F1SP80/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9H8G2-1", "protein_name": "Caspase activity and apoptosis inhibitor 1", "gene_name": "CAAP1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQIDDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKPA", "length": 361 }, "evidence": [ { "id": "F1SP80", "url": "https://omabrowser.org/oma/group/F1SP80/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "negative regulation of apoptotic process", "id": "GO:0043066", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043066", "evidence": [ { "database": "UniProtKB", "id": "F1SP80", "url": "https://www.uniprot.org/uniprotkb/F1SP80" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 170, "end_pos": 172, "annotation": "n_glycosylation_sequon" }, { "start_pos": 57, "end_pos": 59, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 170, "end_pos": 172 }, { "start_pos": 57, "end_pos": 59 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1ST15-1", "uniprot_ac": "F1ST15", "uniprot_id": "F1ST15_PIG", "mass": { "chemical_mass": 50420.0, "monoisotopic_mass": 50420.0 }, "refseq": { "ac": "XP_003481499", "name": "CUGBP Elav-like family member 3 isoform X4", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481499" }, "gene_names": [ { "name": "CELF3", "type": "recommended", "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ] }, { "name": "CELF3", "type": "synonym", "evidence": [ { "id": "XP_003481499", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481499" } ] } ], "protein_names": [ { "name": "CUGBP Elav-like family member 3", "type": "recommended", "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#names_and_taxonomy" } ] }, { "name": "Bruno-like protein 1", "type": "synonym", "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#names_and_taxonomy" } ] }, { "name": "CUG-BP- and ETR-3-like factor 3", "type": "synonym", "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#names_and_taxonomy" } ] }, { "name": "CUGBP Elav-like family member 3 isoform X4", "type": "synonym", "evidence": [ { "id": "XP_003481499", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481499" } ] }, { "name": "ELAV-type RNA-binding protein 1", "type": "synonym", "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#names_and_taxonomy" } ] }, { "name": "RNA-binding protein BRUNOL-1", "type": "synonym", "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#names_and_taxonomy" } ] }, { "name": "Trinucleotide repeat-containing gene 4 protein", "type": "synonym", "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "RNA-binding protein involved in the regulation of pre-mRNA alternative splicing. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of cardiac isoforms of TNNT2 during heart remodeling at the juvenile to adult transition. Activates the splicing of MAPT/Tau exon 10. Binds to muscle-specific splicing enhancer (MSE) intronic sites flanking the alternative exon 5 of TNNT2 pre-mRNA.", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15#function" }, { "database": "UniProtKB", "id": "ARBA00055885", "url": "https://www.uniprot.org/uniprotkb/ARBA00055885#function" }, { "database": "UniProtKB", "id": "A0A287AAF7", "url": "https://www.uniprot.org/uniprotkb/A0A287AAF7#function" }, { "database": "UniProtKB", "id": "A0A4X1W0V8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W0V8#function" }, { "database": "UniProtKB", "id": "A0A4X1W1I1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1I1#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "CELF3", "url": "https://www.uniprot.org/uniprotkb/F1ST15", "locus": { "chromosome": "4", "start_pos": 97528481, "end_pos": 97514224, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006618", "url": "https://www.ensembl.org/id/ENSSSCG00000006618" } ] } } ], "crossref": [ { "id": "ENSSSCG00000006618", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006618", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12632", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12632", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12635", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12635", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd12639", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12639", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100515828", "url": "https://www.ncbi.nlm.nih.gov/gene/100515828", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034648", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034648", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100515828", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515828", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "SPMTLNY", "url": "https://omabrowser.org/oma/group/SPMTLNY/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A287AAF7", "url": "https://www.orthodb.org/?gene=A0A287AAF7", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1W0V8", "url": "https://www.orthodb.org/?gene=A0A4X1W0V8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1ST15", "url": "https://www.orthodb.org/?gene=F1ST15", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR24012", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24012", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003481499", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003481499", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A287AAF7", "url": "https://www.uniprot.org/uniprotkb/A0A287AAF7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287AAF7-1", "url": "https://www.uniprot.org/uniprotkb/A0A287AAF7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W0V8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W0V8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W0V8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W0V8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W1I1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1I1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1W1I1-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1I1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1ST15-1", "url": "https://www.uniprot.org/uniprotkb/F1ST15-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 464, "header": "tr|F1ST15-1|F1ST15_PIG Isoform 1 of CUGBP Elav-like family member 3 OS=Sus scrofa OX=9823 GN=CELF3 PE=1 SV=3 CANONICAL=F1ST15-1" }, "isoforms": [ { "isoform_ac": "A0A287AAF7-1", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#A0A287AAF7-1", "sequence": { "sequence": "MNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 388, "header": "tr|A0A287AAF7-1|A0A287AAF7_PIG Computationally mapped isoform of CUGBP Elav-like family member 3 OS=Sus scrofa OX=9823 GN=CELF3 PE=1 SV=2 CANONICAL=F1ST15-1" }, "locus": { "chromosome": "4", "start_pos": 97525906, "end_pos": 97520972, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000049625.2", "url": "https://www.ensembl.org/id/ENSSSCT00000049625.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000040930.2", "url": "https://www.ensembl.org/id/ENSSSCP00000040930.2" } ] } }, { "isoform_ac": "A0A4X1W0V8-1", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#A0A4X1W0V8-1", "sequence": { "sequence": "MEEVEVKKKEEKRPAKGERKPHYTHSSEITCPSPPPTPQPWLPTAQALSRVQHPAAAVQASQPLGLCPMPISPETPEAEGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 495, "header": "tr|A0A4X1W0V8-1|A0A4X1W0V8_PIG Computationally mapped isoform of CUGBP Elav-like family member 3 OS=Sus scrofa OX=9823 GN=CELF3 PE=1 SV=1 CANONICAL=F1ST15-1" }, "locus": { "chromosome": "4", "start_pos": 97525906, "end_pos": 97515401, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000063688.3", "url": "https://www.ensembl.org/id/ENSSSCT00000063688.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000056250.1", "url": "https://www.ensembl.org/id/ENSSSCP00000056250.1" } ] } }, { "isoform_ac": "A0A4X1W1I1-1", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#A0A4X1W1I1-1", "sequence": { "sequence": "MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 414, "header": "tr|A0A4X1W1I1-1|F1ST15_PIG Computationally mapped isoform of CUGBP Elav-like family member 3 OS=Sus scrofa OX=9823 GN=CELF3 PE=1 SV=1 CANONICAL=F1ST15-1" }, "locus": { "chromosome": "4", "start_pos": 97525906, "end_pos": 97514396, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000052166.2", "url": "https://www.ensembl.org/id/ENSSSCT00000052166.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000049072.2", "url": "https://www.ensembl.org/id/ENSSSCP00000049072.2" } ] } }, { "isoform_ac": "F1ST15-1", "url": "https://www.uniprot.org/uniprotkb/F1ST15/entry#F1ST15-1", "sequence": { "sequence": "MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 464, "header": "tr|F1ST15-1|F1ST15_PIG Isoform 1 of CUGBP Elav-like family member 3 OS=Sus scrofa OX=9823 GN=CELF3 PE=1 SV=3 CANONICAL=F1ST15-1" }, "locus": { "chromosome": "4", "start_pos": 97525906, "end_pos": 97514396, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007252.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007252.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000007057.4", "url": "https://www.ensembl.org/id/ENSSSCP00000007057.4" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 254, "start_aa": "Thr", "end_pos": 254, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr254", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1W1I1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1W1I1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100515828", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100515828", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AGJ7-1", "protein_name": "CUGBP Elav-like family member 3", "gene_name": "Celf3", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPDEALSAERSAGEAPIMPQTHSWLVMLSAAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 501 }, "evidence": [ { "id": "F1ST15", "url": "https://omabrowser.org/oma/group/F1ST15/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q08E07-1", "protein_name": "CUGBP Elav-like family member 3", "gene_name": "CELF3", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 461 }, "evidence": [ { "id": "F1ST15", "url": "https://omabrowser.org/oma/group/F1ST15/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q5SZQ8-1", "protein_name": "CUGBP Elav-like family member 3", "gene_name": "CELF3", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAINANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 465 }, "evidence": [ { "id": "F1ST15", "url": "https://omabrowser.org/oma/group/F1ST15/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8CIN6-1", "protein_name": "CUGBP Elav-like family member 3", "gene_name": "Celf3", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MKEPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSESRGDRKLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGPDGTSKGCAFVKFQTHAEAQAAINTLHSSRTLPGASSSLVVKFADTEKERGLRRMQQVATQLGMFSPIALQFGAYSAYTQALMQQQAALVAAHSAYLSPMATMAAVQMQHMAAISANGLIATPITPSSGTSTPPAIAATPVSAIPAALGVNGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQQAYAGMQHYTAAYPAAYSLVAPAFPQPPALVAQQPPPPPQQQQQQQQQQQQQQQQREGPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY", "length": 465 }, "evidence": [ { "id": "F1ST15", "url": "https://omabrowser.org/oma/group/F1ST15/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "7SK snRNA binding", "id": "GO:0097322", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0097322", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "nuclear body", "id": "GO:0016604", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016604", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "gene expression", "id": "GO:0010467", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010467", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "positive regulation of mRNA splicing, via spliceosome", "id": "GO:0048026", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048026", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "mRNA splice site recognition", "id": "GO:0006376", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006376", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "regulation of alternative mRNA splicing, via spliceosome", "id": "GO:0000381", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000381", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" }, { "name": "mRNA processing", "id": "GO:0006397", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006397", "evidence": [ { "database": "UniProtKB", "id": "F1ST15", "url": "https://www.uniprot.org/uniprotkb/F1ST15" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 417, "end_pos": 419, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1ST15", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1ST15" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "RRM", "eco_id": "ECO_0000259", "start_pos": 7, "end_pos": 88, "start_aa": "Ile", "end_aa": "Ser", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 254 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 417, "end_pos": 419 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", 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"sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SU25-1", "uniprot_ac": "F1SU25", "uniprot_id": "F1SU25_PIG", "mass": { "chemical_mass": 63446.0, "monoisotopic_mass": 63446.0 }, "refseq": { "ac": "XP_013851350", "name": "high affinity choline transporter 1 isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851350" }, "gene_names": [ { "name": "SLC5A7", "type": "recommended", "evidence": [ { "id": "F1SU25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ] }, { "name": "SLC5A7", "type": "synonym", "evidence": [ { "id": "XP_013851350", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851350" } ] } ], "protein_names": [ { "name": "High affinity choline transporter 1", "type": "recommended", "evidence": [ { "id": "F1SU25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU25/entry#names_and_taxonomy" } ] }, { "name": "Hemicholinium-3-sensitive choline transporter", "type": "synonym", "evidence": [ { "id": "F1SU25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU25/entry#names_and_taxonomy" } ] }, { "name": "Solute carrier family 5 member 7", "type": "synonym", "evidence": [ { "id": "F1SU25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SU25/entry#names_and_taxonomy" } ] }, { "name": "high affinity choline transporter 1 isoform X2", "type": "synonym", "evidence": [ { "id": "XP_013851350", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851350" } ] } ], "function": [ { "annotation": "High-affinity Na(+)-coupled choline transmembrane symporter. Functions as an electrogenic, voltage-dependent transporter with variable charge/choline stoichiometry. Choline uptake and choline-induced current is also Cl(-)-dependent where Cl(-) is likely a regulatory ion rather than cotransported ion. Plays a critical role in acetylcholine (ACh) synthesis by taking up the substrate choline from the synaptic cleft into the presynaptic nerve terminals after neurotransmitter release. SLC5A7/CHT1-mediated choline high-affinity transport in cholinergic neurons is the rate-limiting step for production of ACh, thereby facilitating communication by subsequent action potentials. Localized predominantly in presynaptic terminal intracellular organelles, and translocated to the plasma membrane in active form in response to neuronal activity.", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25#function" }, { "database": "UniProtKB", "id": "ARBA00056873", "url": "https://www.uniprot.org/uniprotkb/ARBA00056873#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC5A7", "url": "https://www.uniprot.org/uniprotkb/F1SU25", "locus": { "chromosome": "3", "start_pos": 47996335, "end_pos": 48022379, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008140", "url": "https://www.ensembl.org/id/ENSSSCG00000008140" } ] } } ], "crossref": [ { "id": "F1SU25", "url": "https://alphafold.ebi.ac.uk/entry/F1SU25", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008140", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008140", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd11474", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd11474", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100512044", "url": "https://www.ncbi.nlm.nih.gov/gene/100512044", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001734", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001734", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR038377", "url": "https://www.ebi.ac.uk/interpro/entry/IPR038377", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052244", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052244", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100512044", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512044", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "WKTKNTG", "url": "https://omabrowser.org/oma/group/WKTKNTG/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A4X1VUP4", "url": "https://www.orthodb.org/?gene=A0A4X1VUP4", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "F1SU25", "url": "https://www.orthodb.org/?gene=F1SU25", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45897", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45897", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45897:SF2", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45897:SF2", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00474", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00474", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-264642", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-264642", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-9958517", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9958517", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013851350", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013851350", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "76443", "url": "https://www.rhea-db.org/rhea/76443", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A4X1VUP4", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VUP4-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VUP4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SU25-1", "url": "https://www.uniprot.org/uniprotkb/F1SU25-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAFQVEGLIAIVVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIINTDVHASIIVSALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWISVPFALSNSAVTDIGFTALHTKYQKPWLGTIESFEVYTWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCMVMALPPILIGAIGASTDWNQTTYKPDTPKDNQQADMILPIVLKYLCPMYISYFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDREIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAVAGYIAGLFLRVTGGEPYLNLQPLIFYPGYYVEKNGIYNQRFPFKTLAMLTSFLSNICISYLAKYLFESGTLPPKLDMFDAVVARHSEENMDKTILVKNENIKLDELAPVKPRQSLTLSSTFTNQEAFLNIDSSPEGSGTEDNL", "length": 579, "header": "tr|F1SU25-1|F1SU25_PIG Isoform 1 of High affinity choline transporter 1 OS=Sus scrofa OX=9823 GN=SLC5A7 PE=1 SV=1 CANONICAL=F1SU25-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VUP4-1", "url": "https://www.uniprot.org/uniprotkb/F1SU25/entry#A0A4X1VUP4-1", "sequence": { "sequence": "MAFQVEGLIAIVVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIINTDVHASIIVSALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWISVPFALSNSAVTDIGFTALHTKYQKPWLGTIESFEVYTWLDSFLLLVVHPHFMPTFHLSVGDSVHHWTPEFILLPNLDSLNVQRHQDMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCMVMALPPILIGAIGASTDWNQTTYKPDTPKDNQQADMILPIVLKYLCPMYISYFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDREIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAVAGYIAGLFLRVTGGEPYLNLQPLIFYPGYYVEKNGIYNQRFPFKTLAMLTSFLSNICISYLAKYLFESGTLPPKLDMFDAVVARHSEENMDKTILVKNENIKLDELAPVKPRQSLTLSSTFTNQEAFLNIDSSPEGSGTEDNL", "length": 620, "header": "tr|A0A4X1VUP4-1|A0A4X1VUP4_PIG Computationally mapped isoform of Solute carrier family 5 member 7 OS=Sus scrofa OX=9823 GN=SLC5A7 PE=1 SV=1 CANONICAL=F1SU25-1" }, "locus": { "chromosome": "3", "start_pos": 48020729, "end_pos": 47997289, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041705.3", "url": "https://www.ensembl.org/id/ENSSSCT00000041705.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000044875.1", "url": "https://www.ensembl.org/id/ENSSSCP00000044875.1" } ] } }, { "isoform_ac": "F1SU25-1", "url": "https://www.uniprot.org/uniprotkb/F1SU25/entry#F1SU25-1", "sequence": { "sequence": "MAFQVEGLIAIVVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPDYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIINTDVHASIIVSALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWISVPFALSNSAVTDIGFTALHTKYQKPWLGTIESFEVYTWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCMVMALPPILIGAIGASTDWNQTTYKPDTPKDNQQADMILPIVLKYLCPMYISYFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDREIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAVAGYIAGLFLRVTGGEPYLNLQPLIFYPGYYVEKNGIYNQRFPFKTLAMLTSFLSNICISYLAKYLFESGTLPPKLDMFDAVVARHSEENMDKTILVKNENIKLDELAPVKPRQSLTLSSTFTNQEAFLNIDSSPEGSGTEDNL", "length": 579, "header": "tr|F1SU25-1|F1SU25_PIG Isoform 1 of High affinity choline transporter 1 OS=Sus scrofa OX=9823 GN=SLC5A7 PE=1 SV=1 CANONICAL=F1SU25-1" }, "locus": { "chromosome": "3", "start_pos": 48020729, "end_pos": 47997289, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008917.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008917.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008691.2", "url": "https://www.ensembl.org/id/ENSSSCP00000008691.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100512044", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100512044", "resource": "KEGG Pathway" }, { "id": "R-SSC-264642", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-264642", "resource": "Reactome", "description": "Acetylcholine Neurotransmitter Release Cycle" }, { "id": "R-SSC-9958517", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-9958517", "resource": "Reactome", "description": "SLC-mediated bile acid transport" } ], "orthologs": [ { "uniprot_canonical_ac": "F1P4Q0-1", "protein_name": "High affinity choline transporter 1", "gene_name": "SLC5A7", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MPFHVEGLVAIAVFYLAILAVGIWAAWKTKNTSSDGDRSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYGLAWAQAPIGYSLSLVLGGLFFAKPMRSKGYVTMLDPFQQLYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDINVNLSVIISALIATLYTLVGGLYSVAYTDVVQLFCIFLGLWISVPFALSNPAVTDIGFTAVHEVHQAPWLGTIGSLNIYTWLDNFLLLTFGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCIVMAIPAVLIGAIGASTAWNQTEYGVPDPIANKEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDREIVWVMRITVFLFGASATAMALLASSVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAIAGYLFGLVLRITGGEPYLYLQPLIYYPGCYPDENNIYVQRFPFKTLAMLTSFFTNIIVSYLAKYLFESGTLPPKLDFLDAVVARYSREHMDKATLVKSDNIVLNELAPVNPRHSLTLSSTFTNKEAFNYVDSSPDLSNTEDN", "length": 578 }, "evidence": [ { "id": "F1SU25", "url": "https://omabrowser.org/oma/group/F1SU25/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3I4F7-1", "protein_name": "High affinity choline transporter 1", "gene_name": "Slc5a7", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSFHVEGLVAIILFYLLIFLVGIWAAWKTKNSGNAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYGPGCGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDVNASVIVSALIAILYTLVGGLYSVAYTDVVQLFCIFIGLWISVPFALSHPAVTDIGFTAVHAKYQSPWLGTIEPIEVYTWLDNFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPSICIGAIGASTDWNQTAYGFPDPKTKEEGDMILPIVLQYLCPGYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWIMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAVAGYIFGLFLRITGGEPYLYLQPLIFYPGYYTDKNGIYNQRFPFKTLSMVTSFLTNICVSYLAKYLFESGTLPPKLDVFDAVVSRHSEENMDKTILVRNENIKLNELAPVKPRQSLTLSSTFTNKEALLDVDSSPEGSGTEDNLQ", "length": 580 }, "evidence": [ { "id": "F1SU25", "url": "https://omabrowser.org/oma/group/F1SU25/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q8BGY9-1", "protein_name": "High affinity choline transporter 1", "gene_name": "Slc5a7", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSFHVEGLVAIILFYLLIFLVGIWAAWKTKNSGNPEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYGPGCGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDVNISVIVSALIAILYTLVGGLYSVAYTDVVQLFCIFIGLWISVPFALSHPAVTDIGFTAVHAKYQSPWLGTIESVEVYTWLDNFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAICIGAIGASTDWNQTAYGYPDPKTKEEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVLVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAVAGYIFGLFLRITGGEPYLYLQPLIFYPGYYSDKNGIYNQRFPFKTLSMVTSFFTNICVSYLAKYLFESGTLPPKLDVFDAVVARHSEENMDKTILVRNENIKLNELAPVKPRQSLTLSSTFTNKEALLDVDSSPEGSGTEDNLQ", "length": 580 }, "evidence": [ { "id": "F1SU25", "url": "https://omabrowser.org/oma/group/F1SU25/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9GZV3-1", "protein_name": "High affinity choline transporter 1", "gene_name": "SLC5A7", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAFHVEGLIAIIVFYLLILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDMHISVIISALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWISVPFALSHPAVADIGFTAVHAKYQKPWLGTVDSSEVYSWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMAIPAILIGAIGASTDWNQTAYGLPDPKTTEEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIVIFPQLLCVLFVKGTNTYGAVAGYVSGLFLRITGGEPYLYLQPLIFYPGYYPDDNGIYNQKFPFKTLAMVTSFLTNICISYLAKYLFESGTLPPKLDVFDAVVARHSEENMDKTILVKNENIKLDELALVKPRQSMTLSSTFTNKEAFLDVDSSPEGSGTEDNLQ", "length": 580 }, "evidence": [ { "id": "F1SU25", "url": "https://omabrowser.org/oma/group/F1SU25/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JMD7-1", "protein_name": "High affinity choline transporter 1", "gene_name": "Slc5a7", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MPFHVEGLVAIILFYLLIFLVGIWAAWKTKNSGNAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYGPGCGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVDVNISVIVSALIAILYTLVGGLYSVAYTDVVQLFCIFIGLWISVPFALSHPAVTDIGFTAVHAKYQSPWLGTIESVEVYTWLDNFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAICIGAIGASTDWNQTAYGFPDPKTKEEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAVAGYIFGLFLRITGGEPYLYLQPLIFYPGYYPDKNGIYNQRFPFKTLSMVTSFFTNICVSYLAKYLFESGTLPPKLDIFDAVVSRHSEENMDKTILVRNENIKLNELAPVKPRQSLTLSSTFTNKEALLDVDSSPEGSGTEDNLQ", "length": 580 }, "evidence": [ { "id": "F1SU25", "url": "https://omabrowser.org/oma/group/F1SU25/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q9VE46-1", "protein_name": "High-affinity choline transporter 1", "gene_name": "ChT", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MINIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEPKKHWLYIDYGLLLVFGGIPWQVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYPLTVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYIVALAIRLSGGEAILGLAPLIKYPGYDEETKEQMFPFRTMAMLLSLVTLISVSWWTKMMFESGKLPPSYDYFRCVVNIPEDVQRVGDPSESGEQLSVMAGPLARSYGAATMAGKDERNGRINPALESDDDLPVAEARRINQETAQAQVKKMLDNATGVKPSGGGGGHLQSQSGMAMPTAEQDNTAF", "length": 614 }, "evidence": [ { "id": "F1SU25", "url": "https://omabrowser.org/oma/group/F1SU25/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "choline binding", "id": "GO:0033265", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0033265", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "choline:sodium symporter activity", "id": "GO:0005307", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005307", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "symporter activity", "id": "GO:0015293", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015293", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "choline transmembrane transporter activity", "id": "GO:0015220", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015220", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 9, "go_terms": [ { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "axon", "id": "GO:0030424", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030424", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030425", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "neuromuscular junction", "id": "GO:0031594", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031594", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "perikaryon", "id": "GO:0043204", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0043204", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "early endosome membrane", "id": "GO:0031901", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031901", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "synaptic vesicle membrane", "id": "GO:0030672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030672", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "presynaptic membrane", "id": "GO:0042734", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042734", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 5, "go_terms": [ { "name": "synaptic transmission, cholinergic", "id": "GO:0007271", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007271", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "neuromuscular synaptic transmission", "id": "GO:0007274", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007274", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "acetylcholine biosynthetic process", "id": "GO:0008292", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008292", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "choline transport", "id": "GO:0015871", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015871", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" }, { "name": "sodium ion transport", "id": "GO:0006814", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006814", "evidence": [ { "database": "UniProtKB", "id": "F1SU25", "url": "https://www.uniprot.org/uniprotkb/F1SU25" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 301, "end_pos": 303, "annotation": "n_glycosylation_sequon" }, { "start_pos": 371, "end_pos": 373, "annotation": "n_glycosylation_sequon" }, { "start_pos": 69, "end_pos": 71, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "76443", "name": "", "equation": "choline(out) + n Na(+)(out) = choline(in) + n Na(+)(in)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "76443", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/76443" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SU25-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 579, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SU25-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SU25" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 301, "end_pos": 303 }, { "start_pos": 371, "end_pos": 373 }, { "start_pos": 69, "end_pos": 71 } ] }, "class_list": [], "section_stats": [ 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"sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "F1SUF5-1", "uniprot_ac": "F1SUF5", "uniprot_id": "F1SUF5_PIG", "mass": { "chemical_mass": 126625.0, "monoisotopic_mass": 126625.0 }, "refseq": {}, "gene_names": [ { "name": "NOL8", "type": "recommended", "evidence": [ { "id": "F1SUF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" } ] } ], "protein_names": [ { "name": "Nucleolar protein 8", "type": "recommended", "evidence": [ { "id": "F1SUF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUF5/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Plays an essential role in the survival of diffuse-type gastric cancer cells. Acts as a nucleolar anchoring protein for DDX47. May be involved in regulation of gene expression at the post-transcriptional level or in ribosome biogenesis in cancer cells.", "evidence": [ { "database": "UniProtKB", "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5#function" }, { "database": "UniProtKB", "id": "ARBA00054821", "url": "https://www.uniprot.org/uniprotkb/ARBA00054821#function" }, { "database": "UniProtKB", "id": "A0A480JUS0", "url": "https://www.uniprot.org/uniprotkb/A0A480JUS0#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NOL8", "url": "https://www.uniprot.org/uniprotkb/F1SUF5", "locus": { "chromosome": "3", "start_pos": 42026278, "end_pos": 42052773, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008069", "url": "https://www.ensembl.org/id/ENSSSCG00000008069" } ] } } ], "crossref": [ { "id": "F1SUF5", "url": "https://alphafold.ebi.ac.uk/entry/F1SUF5", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008069", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008069", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd12226", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd12226", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100623374", "url": "https://www.ncbi.nlm.nih.gov/gene/100623374", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000504", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000504", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012677", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012677", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR034138", "url": "https://www.ebi.ac.uk/interpro/entry/IPR034138", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100623374", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623374", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RNIMKYD", "url": "https://omabrowser.org/oma/group/RNIMKYD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A480JUS0", "url": "https://www.orthodb.org/?gene=A0A480JUS0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR48029", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48029", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR48029:SF1", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR48029:SF1", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00076", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00076", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A480JUS0", "url": "https://www.uniprot.org/uniprotkb/A0A480JUS0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A480JUS0-1", "url": "https://www.uniprot.org/uniprotkb/A0A480JUS0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SUF5-1", "url": "https://www.uniprot.org/uniprotkb/F1SUF5-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MKASKETKRLFVGGLGQNISEGDLQNQFNRFGEVSDVEIITRKDDQGNPQKVFAYVNIRIAEADLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAAKEKPTAVNTNLLEKMGVVDFHVKAVPGTEVPGHKNWVVSKFGRVLPVLHLKNRHKRKIIKYDPSKYCHNLKKIGEDFTNANPISNLTWELEGGNDPISKKRRGEFSDFHSPPKKIIKVQKNEGSTASPAVRPKPSRITERPWLKQQAAQKTPDGPITPKLSYISDSESQILKNVFFQTSGLETTKNRNSMSDDDIDSEDELRLTIAREENLEKSTWPLVNESENDPFEVVRDDFKSDSHKFHTSIGLGLKNNISSLDSEDNVMGNDYDSDSGDTDEIITRNKNAGKIKNSIALSQMEKSIHKKTSSKNRKKCDLSDSIKEQKRKNNVEIAVSHRVKMPSRKSLADSSGSEDADSASESAESGGDKEYHTMMNCVHVTLTLADLEQLASSNQEAPKEDTESNGQETTAKRDRASKSHRTLGGLHKGHQCINPEEIVASLLEGKEDTCGKQKPREDLKPKFQAFKGVGCLYRKESVKESSKESVASNNKDHNSLILDAPRSISMEKWSLYANDLSGEPTSFQHAKKANDSNKIQPQKKQSTFESQEHEVVSPSNSGKRSRNPTSSLLPVEDKKSLSVAAKTPRRGFDEDSCHRTGKSGDDSENRPILSSRKAPEKSEFSRRDTQENKTNFPLPFNSSSDVNAKDKHAEDNQKRLAALEARQKAKGIQKKLVHNALANLESMGRASGKLFDSSDDESGSEDDSNRFKIKPQFEGRAGQKLMDLQSHFGTDDRFRMDSRFLESDSEEEQEDTSETKTAAEEEIAAEKLKALNIVQSVLHINVSSSTSKGSVAAKKFKDVIHYDPTRHDHATYERKKDDKPKESKAKRKKKREEAEKLPEVSKEMYYNISVDLKQIFQTAKDTSEKRDSTAWNEDSGGEKAEEAQDPAALIMEDEQPEGFTFSFFDSDAKDVKEETYRVETVKPGKISWQGDPRFQDSSSEEEDVTEETDDKKPNPEEVSLPEKETTRFFFFSKNDERLHGSDLFWRGVGNNISRNAWEARINNLRMDCRKKHKDAKRRLKPK", "length": 1123, "header": "tr|F1SUF5-1|F1SUF5_PIG Isoform 1 of Nucleolar protein 8 OS=Sus scrofa OX=9823 GN=NOL8 PE=4 SV=3 CANONICAL=F1SUF5-1" }, "isoforms": [ { "isoform_ac": "A0A480JUS0-1", "url": "https://www.uniprot.org/uniprotkb/F1SUF5/entry#A0A480JUS0-1", "sequence": { "sequence": "MKASKETKRLFVGGLGQNISEGDLQNQFNRFGEVSDVEIITRKDDQGNPQKVFAYVNIRIAEADLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAAKEKPTAVNTNLLEKMGVVDFHVKAVPGTEVPGHKNWVVSKFGRVLPVLHLKNRHKRKIIKYDPSKYCHNLKKIGEDFTNANPISNLTWELEGGNDPISKKRRGEFSDFHSPPKKIIKVQKNEGSTASPAVRPKPSRITERPWLKQQAAQKTPDGPITPKLSYISDSESQILKNVFFQTSGLETTKNRNSMSDDDIDSEDELRLTIAREENLEKSTWPLVNESENDPFEVVRDDFKSDSHKFHTSIGLGLKNNISSLDSEDNVMGNDYDSDSGDTDEIITRNKNAGKIKNSIALSQMEKSIHKKTSSKNRKKCDLSDSIKEQKRKNNVEIAVSHRVKMPSRKSLADSSGSEDADSASESAESGGDKEYHTMMNCVHVTLTLADLEQLASSNQEAPKEDTESNGQETTAKRDRASKSHRTLGGLHKGHQCINPEEIVASLLEGKEDTCGKQKPREDLKPKFQAFKGVGCLYRKESVKESSKESVASNNKDHNSLILDAPRSISMEKWSLYANDLSGEPTSFQHAKKANDSNKIQPQKKQSTFESQEHEVVSPSNSGKRSRNPTSSLLPVEDKKSLSVAAKTPRRGFDEDSCHRTGKSGDDSENRPILSSRKAPEKSEFSRRDTQENKTNFPLPFNSSSDVNAKDKHAEDNQKRLAALEARQKAKGIQKKLVHNALANLDGHPEDKPTHIIFGSNSESETEETSTQEQSQPEEEPVKESMGRASGKLFDSSDDESGSEDDSNRFKIKPQFEGRAGQKLMDLQSHFGTDDRFRMDSRFLESDSEEEQEDTSETKTAAEEEIAAEKLKALNIVQSVLHINVSSSTSKGSVAAKKFKDVIHYDPTRHDHATYERKKDDKPKESKAKRKKKREEAEKLPEVSKEMYYNISVDLKQIFQTAKDTSEKRDSTAWNEDSGGEKAEEAQDPAALIMEDEQPEGFTFSFFDSDAKDVKEETYRVETVKPGKISWQGDPRFQDSSSEEEDVTEETDDKKPNPEEVSLPEKETTRFFFFSKNDERLHGSDLFWRGVGNNISRNAWEARINNLRMDCRKKHKDAKRRLKPK", "length": 1161, "header": "tr|A0A480JUS0-1|A0A480JUS0_PIG Computationally mapped isoform of Nucleolar protein 8 OS=Sus scrofa OX=9823 GN=NOL8 PE=4 SV=1 CANONICAL=F1SUF5-1" }, "locus": { "chromosome": "3", "start_pos": 42051649, "end_pos": 42026619, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000093306.1", "url": "https://www.ensembl.org/id/ENSSSCT00000093306.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078646.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078646.1" } ] } }, { "isoform_ac": "F1SUF5-1", "url": "https://www.uniprot.org/uniprotkb/F1SUF5/entry#F1SUF5-1", "sequence": { "sequence": "MKASKETKRLFVGGLGQNISEGDLQNQFNRFGEVSDVEIITRKDDQGNPQKVFAYVNIRIAEADLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAAKEKPTAVNTNLLEKMGVVDFHVKAVPGTEVPGHKNWVVSKFGRVLPVLHLKNRHKRKIIKYDPSKYCHNLKKIGEDFTNANPISNLTWELEGGNDPISKKRRGEFSDFHSPPKKIIKVQKNEGSTASPAVRPKPSRITERPWLKQQAAQKTPDGPITPKLSYISDSESQILKNVFFQTSGLETTKNRNSMSDDDIDSEDELRLTIAREENLEKSTWPLVNESENDPFEVVRDDFKSDSHKFHTSIGLGLKNNISSLDSEDNVMGNDYDSDSGDTDEIITRNKNAGKIKNSIALSQMEKSIHKKTSSKNRKKCDLSDSIKEQKRKNNVEIAVSHRVKMPSRKSLADSSGSEDADSASESAESGGDKEYHTMMNCVHVTLTLADLEQLASSNQEAPKEDTESNGQETTAKRDRASKSHRTLGGLHKGHQCINPEEIVASLLEGKEDTCGKQKPREDLKPKFQAFKGVGCLYRKESVKESSKESVASNNKDHNSLILDAPRSISMEKWSLYANDLSGEPTSFQHAKKANDSNKIQPQKKQSTFESQEHEVVSPSNSGKRSRNPTSSLLPVEDKKSLSVAAKTPRRGFDEDSCHRTGKSGDDSENRPILSSRKAPEKSEFSRRDTQENKTNFPLPFNSSSDVNAKDKHAEDNQKRLAALEARQKAKGIQKKLVHNALANLESMGRASGKLFDSSDDESGSEDDSNRFKIKPQFEGRAGQKLMDLQSHFGTDDRFRMDSRFLESDSEEEQEDTSETKTAAEEEIAAEKLKALNIVQSVLHINVSSSTSKGSVAAKKFKDVIHYDPTRHDHATYERKKDDKPKESKAKRKKKREEAEKLPEVSKEMYYNISVDLKQIFQTAKDTSEKRDSTAWNEDSGGEKAEEAQDPAALIMEDEQPEGFTFSFFDSDAKDVKEETYRVETVKPGKISWQGDPRFQDSSSEEEDVTEETDDKKPNPEEVSLPEKETTRFFFFSKNDERLHGSDLFWRGVGNNISRNAWEARINNLRMDCRKKHKDAKRRLKPK", "length": 1123, "header": "tr|F1SUF5-1|F1SUF5_PIG Isoform 1 of Nucleolar protein 8 OS=Sus scrofa OX=9823 GN=NOL8 PE=4 SV=3 CANONICAL=F1SUF5-1" }, "locus": { "chromosome": "3", "start_pos": 42051649, "end_pos": 42026619, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008842.4", "url": "https://www.ensembl.org/id/ENSSSCT00000008842.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008618.4", "url": "https://www.ensembl.org/id/ENSSSCP00000008618.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100623374", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100623374", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1W2Q629-1", "protein_name": "Nucleolar protein 8", "gene_name": "Nol8", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MRSTQTEQYRHTVGKYILDRCPTFLKANREMKRLFVGGLGQGISETDLQSQLSRFGEVSDVEIITRRDDQGNSQKVFAYVNIQITESDLKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAKKEKSTTGNTSLLEKMGGMDFHMKAVPGTAVPGHKNWVVSKFGRVLPVLHLKNEHKQKISFGCNIMKYDPSKYCHNIKKIPENLTETIPITDLTWELEGGNDPMSKKRRGEFSDFLPQKVKKVQKSIDPMECKVSDTGLRTNQVLERNKSAQPMTIHGTAPSTVTPSKPLLVSSSGTQRPKHVVFHTSDFEIILNKSSMSDDDIDSEDELKMMIAEEENREKPGHPSVSESEHDTFEVVRDNFKSHVHKLPSSASLGNNHDYDSSDTDEIIAMKSIGKVKNSTEFSQPERAISQRSSFQKIEPSNDCVKVQGTKSNKESAPCHGIKFVNPKFPPDSNSSDSEESEEDEEYKILMKNCPRVSLTLADLEQMAGSHQKFSGKDTETNGPQNVSHCKFDTTSKSSKTSGDLYNGRQCILPEEIVASLLEEENSYSKQKSEENILKPKFQAFKGIGCLYAKESVDKTLKENTAFSTVSEHHSSLKQEDHSRSFMENGFKCVNGSSSKLTSCQPSKKVNDPNHIQPPKKQNQNSTSFDKGSINPLPCSLPLKAKTSLNLSTESHKIDSDGDTCHWPENRKALEKERTNLSNFTSLEKPPKVSPRKDPQKSTASFSLSVSNASCITAKDKHAEDNQKRLAALAAWQNAREVQKKLVHSALANLDGRPENRKTHIVFASDNESETEETSTHEQSCPEKELVKESVRKASGKLFDSSDDEESDSKEDSTRFSIKPQFEGRAGQKLMDLQSHFGSDERFRMDSRFLESDSEDEQKELNENTVDEDELAAEKKKTLSVVQSVLNISVNNPTSKGSVAAKKFKDIVHYDPTKHDHAIYERKQEDKEKESKAKRKKKKEEAEKLPEVSQDMYYNIATDLKEIFQSMKNTDEKEEDTSRNEAYAREGAGEIRNAETLTCGSEQTAGFTFSFFDSATKDVKDDTYRVEPVRRGKTVCQNDPRFQDSSSEEEDVTEEADHRKTSLGEAVPEKETIRFFFFSENDDRLRGSDLFWSGAGGGISRSSWEARTSSLLLYKNNRNKIREL", "length": 1159 }, "evidence": [ { "id": "F1SUF5", "url": "https://omabrowser.org/oma/group/F1SUF5/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8M2BLC0-1", "protein_name": "Nucleolar protein 8", "gene_name": "nol8", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MKRLYIGGLGHTVTEKDLKDRFGKFGDVKDVEIITRKDDQGAPLKTFGYININITDAEFKRCVGILNKSTWKGGTLLIQLAKESFLHRLAEEREQQVEKIKTPKIAPQEKLVDSFKAAGVENFHMKAAVPGTEIPGHKDWVVSKFGRVLPVLNLKSKGKNKVFKYDPSKHCHNIKRLEIADDFTSVSELTWEVEGGDDEISKKRRGEFPKQKTSPKRSKVDLSLFLSNGINAPASGNKNKILQRDLPATKTEQPVVKKSVCVFDSDVDSEDEIKMLVAQEHLRNSKPTFTMDDEDNLEVVGDDFVVKSNAFWIGAEQSDVKSLLTSSKDDEEYDSADTDEILTNRKTLKPQANQESATKSNGNECSSGSEEGSEDESDDDLSVDSDYEAMMMGNCYRLDLSLADLEQLAKNAEGVSDDEHVEEPEEPKTPSKPPKKTGNCPEDILASLLGDDTPEKESKKKKSQGAAKSLPAFIGTKDLFGDPEPILKRVCQSIDSESHKRLKQDPKLKKSIVSEDKSQPHSSNQPSQQKLSTLQVKSASIKLENEGSKSENNSSCQESTSSDEDERAETKLKSKVGSSNSNTIIKPKDTEPSINDSSSEESEKDEKTAEVSNSQSSSTAQLARTVSESEIKTTNNLKTPIKPKQAKLSTSTGSESSSEESESSVEDIITSKMSSATHLVKTIPKTTINTANTSVKPKQISLPTSTGSESSSEKSKSSVEEIITSKMSSATQFVKTTPETKTNTLNAPIKAKQASSSSSSDSSGDELESSDEEEKSKSVESYSKVLHSTVVDAQKQQQDNQKRIAALEQRQKETEQQKKLIQGALSNVDAVKANKGKHIVFDSDEDDNDETANEPEQPTSQKKSLFEDDSGSDDDQILKEKEDRAGGSKLFDSEDEDDAAEDERFQIKPQFEGKAGEKLMKLQARFGTDSRFQIDSRFLESDDEAEDQESTTPGKDAEEELLEEKKKSLDILQSILNTSIQPQSTKKSKTFKDVSGLHYDPTREEHAAFETKIEEPKKESKAARRKKREEAVKLPEVSKDVYYDVSVDLKEAFGAAKEDQQEKETILWDKEAEETEDGAPMEVSFTSNVETNKDSSGGFKFSFFGDDTVVENSTKTDEYKIETIKAAKFSWQVDPRFQDSSSDEEGVDEVDEDQSASVNVQEESPMPSKKAFFFFHKDDERLKEGPGMFCRSGNLKDQREAWEEKRTSLREECRKKHRDARRRQRPSLKT", "length": 1230 }, "evidence": [ { "id": "F1SUF5", "url": "https://omabrowser.org/oma/group/F1SUF5/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q3UHX0-1", "protein_name": "Nucleolar protein 8", "gene_name": "Nol8", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MQGNREMKRLFVGGLGQGISETDLQNQFGRFGEVSDVEIITRKDDQGNSQKVFAYVNIQITEADLKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQEREDAKAKKEKSTTGNPTLLEKMGAVDFHMKAVPGTEVPGHKNWVVSKFGRVLPVLHLKNQQKHKIMKYDPSKYCHNIKKIPENLTETTPIAELTWELEGGNDPMSKKRRGEFSDFHIPPQKVKKVQKSNDPMESKVSNIGLRTNQVMEKNKSTHPVTAHGTAPSTVNPSKQLLVSSSGTQKPKHVVFHNSDFEIIWNKSSMSDDDVDSEDELKMMIAKEENREKPGHSSVNESEHDTFEVVRDDFKSNIHKLSSSVSLGNNHEYDSSDTDEIIAMKTKNAKVKNSAESSQPERTVSKKSSFQKIEPSNDCIKVQGINSNKESALCHGVKFVNPKFPPDSSGSDSEESEEDEEYKVLMENCPRVSLTLADLEQLAGSHRKFPGKDSETNGPQNDSHCKFDTTSKNPKTSGDLYNGRQQCILPEEIVASLLEDENTYSKQKSEEDILKPKFQAFKGIGCLYAKESVDKTLKENIAFNTGGGHHSSLKHEDHNRSLMENGSKCVNGSSSKLTSCQPAKKVNDPNHIQPPKRQCTFENQNHKVMSSTSCDKGSTNPLPGPLPLKAKTSLHLSANSHKVDSDGDACHWPESRKALEKERTNLSNLESLEKSSKVSPREDPQKSPAGFSLSDSNASCINAKDKQAEDNQKRLAALAAWQKAREVQKKLVHSALANLDGHPEDKKTHIVFASDNESETEETSTQEQSCPEKELMKESVSKSPGKLFDSSDDEDSDSKEDSTRFSIKPQFEGRAGQKLMDLQSQFGSDERFRMDSRFLESDSEDEKKELNEDKVNEDELAAEKKKTLNVVQSVLNINVNNPTNKGSVAAKKFKDIVHYDPTKHDHAIYERKQEDKEKESKATRKKKKEEAEKLPEVSQDMYYNIAADLKEIFQSMSNTDEKEEDVPRTEAGAREGTGKIRNAETLACEPEQTTGFTFSFFDSATKDEKDATYRIELVKHGKIVCPNDPRFQDSSSEEEDIAEEADHSKPSPGEAVPENEAIRFFFFSENDDRLRGSNLFWSGMGGSISRNSWEARTSSLLLECRKKHKEAKRKVKAN", "length": 1147 }, "evidence": [ { "id": "F1SUF5", "url": "https://omabrowser.org/oma/group/F1SUF5/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q76FK4-1", "protein_name": "Nucleolar protein 8", "gene_name": "NOL8", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MKVNRETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREAAKAKKEESTTGNANLLEKTGGVDFHMKAVPGTEVPGHKNWVVSKFGRVLPVLHLKNQHKRKIIKYDPSKYCHNLKKIGEDFSNTIPISSLTWELEGGNDPMSKKRRGEFSDFHGPPKKIIKVQKDESSTGSLAMSTRPRRVIERPPLTQQQAAQKRTCDSITPSKSSPVPVSDTQKLKNLPFKTSGLETAKKRNSISDDDTDSEDELRMMIAKEENLQRTTQPSINESESDPFEVVRDDFKSGVHKLHSLIGLGIKNRVSCHDSDDDIMRNDREYDSGDTDEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENCELSDHCIKLQKRKSNVESALSHGLKSLNRKSPSHSSSSEDADSASELADSEGGEEYNAMMKNCLRVNLTLADLEQLAGSDLKVPNEDTKSDGPETTTQCKFDRGSKSPKTPTGLRRGRQCIRPAEIVASLLEGEENTCGKQKPKENNLKPKFQAFKGVGCLYEKESMKKSLKDSVASNNKDQNSMKHEDPSIISMEDGSPYVNGSLGEVTPCQHAKKANGPNYIQPQKRQTTFESQDRKAVSPSSSEKRSKNPISRPLEGKKSLSLSAKTHNIGFDKDSCHSTTKTEASQEERSDSSGLTSLKKSPKVSSKDTREIKTDFSLSISNSSDVSAKDKHAEDNEKRLAALEARQKAKEVQKKLVHNALANLDGHPEDKPTHIIFGSDSECETEETSTQEQSHPGEEWVKESMGKTSGKLFDSSDDDESDSEDDSNRFKIKPQFEGRAGQKLMDLQSHFGTDDRFRMDSRFLETDSEEEQEEVNEKKTAEEEELAEEKKKALNVVQSVLQINLSNSTNRGSVAAKKFKDIIHYDPTKQDHATYERKRDDKPKESKAKRKKKREEAEKLPEVSKEMYYNIAMDLKEIFQTTKYTSEKEEGTPWNEDCGKEKPEEIQDPAALTSDAEQPSGFTFSFFDSDTKDIKEETYRVETVKPGKIVWQEDPRLQDSSSEEEDVTEETDHRNSSPGEASLLEKETTRFFFFSKNDERLQGSDLFWRGVGSNMSRNSWEARTTNLRMDCRKKHKDAKRKMKPK", "length": 1167 }, "evidence": [ { "id": "F1SUF5", "url": "https://omabrowser.org/oma/group/F1SUF5/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 2, "go_terms": [ { "name": "protein localization to nucleolus", "id": "GO:1902570", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1902570", "evidence": [ { "database": "UniProtKB", "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" } ], "pmid": "" }, { "name": "rRNA processing", "id": "GO:0006364", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006364", "evidence": [ { "database": "UniProtKB", "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "nucleolus", "id": "GO:0005730", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005730", "evidence": [ { "database": "UniProtKB", "id": "F1SUF5", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1092, "end_pos": 1094, "annotation": "n_glycosylation_sequon" }, { "start_pos": 18, "end_pos": 20, "annotation": "n_glycosylation_sequon" }, { "start_pos": 190, "end_pos": 192, "annotation": "n_glycosylation_sequon" }, { "start_pos": 325, "end_pos": 327, "annotation": "n_glycosylation_sequon" }, { "start_pos": 357, "end_pos": 359, "annotation": "n_glycosylation_sequon" }, { "start_pos": 631, "end_pos": 633, "annotation": "n_glycosylation_sequon" }, { "start_pos": 729, "end_pos": 731, "annotation": "n_glycosylation_sequon" }, { "start_pos": 738, "end_pos": 740, "annotation": "n_glycosylation_sequon" }, { "start_pos": 73, "end_pos": 75, "annotation": "n_glycosylation_sequon" }, { "start_pos": 882, "end_pos": 884, "annotation": "n_glycosylation_sequon" }, { "start_pos": 948, "end_pos": 950, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-F1SUF5-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1123, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-F1SUF5-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/F1SUF5" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "F1SUF5", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/F1SUF5" }, { "id": "PS50102", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50102" } ], "ann_type": "Domain_Extent_Annotation", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LBH0-1", "uniprot_ac": "I3LBH0", "uniprot_id": "I3LBH0_PIG", "mass": { "chemical_mass": 23576.0, "monoisotopic_mass": 23576.0 }, "refseq": { "ac": "NP_001231570", "name": "reticulon-1 isoform 2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231570" }, "gene_names": [ { "name": "RTN1", "type": "recommended", "evidence": [ { "id": "I3LBH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ] }, { "name": "RTN1", "type": "synonym", "evidence": [ { "id": "NP_001231570", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231570" } ] } ], "protein_names": [ { "name": "Reticulon", "type": "recommended", "evidence": [ { "id": "I3LBH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBH0/entry#names_and_taxonomy" } ] }, { "name": "reticulon-1 isoform 2", "type": "synonym", "evidence": [ { "id": "NP_001231570", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231570" } ] } ], "function": [ { "annotation": "Inhibits amyloid precursor protein processing, probably by blocking BACE1 activity.", "evidence": [ { "database": "UniProtKB", "id": "I3L6J1", "url": "https://www.uniprot.org/uniprotkb/I3L6J1#function" }, { "database": "UniProtKB", "id": "ARBA00037306", "url": "https://www.uniprot.org/uniprotkb/ARBA00037306#function" }, { "database": "UniProtKB", "id": "A0A5G2QSP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSP7#function" }, { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0#function" }, { "database": "UniProtKB", "id": "A0A8W4F995", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F995#function" }, { "database": "UniProtKB", "id": "A0A8W4FG65", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG65#function" }, { "database": "UniProtKB", "id": "A0A5G2QEA3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEA3#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "RTN1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0", "locus": { "chromosome": "1", "start_pos": 188704260, "end_pos": 188926054, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025013", "url": "https://www.ensembl.org/id/ENSSSCG00000025013" } ] } } ], "crossref": [ { "id": "I3LBH0", "url": "https://alphafold.ebi.ac.uk/entry/I3LBH0", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000025013", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025013", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100152394", "url": "https://www.ncbi.nlm.nih.gov/gene/100152394", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR003388", "url": "https://www.ebi.ac.uk/interpro/entry/IPR003388", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR046964", "url": "https://www.ebi.ac.uk/interpro/entry/IPR046964", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "CLWSCWK", "url": "https://omabrowser.org/oma/group/CLWSCWK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LBH0", "url": "https://www.orthodb.org/?gene=I3LBH0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR45799", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45799", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45799:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45799:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF02453", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF02453", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231570", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231570", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QEA3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QEA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QEA3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QSP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSP7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QSP7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QSP7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F995", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F995", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F995-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F995-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG65", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG65", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FG65-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FG65-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6J1", "url": "https://www.uniprot.org/uniprotkb/I3L6J1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L6J1-1", "url": "https://www.uniprot.org/uniprotkb/I3L6J1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LBH0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MQATADSTKMDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKRHAE", "length": 208, "header": "tr|I3LBH0-1|I3LBH0_PIG Isoform 1 of Reticulon OS=Sus scrofa OX=9823 GN=RTN1 PE=1 SV=1 CANONICAL=I3LBH0-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QEA3-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0/entry#A0A5G2QEA3-1", "sequence": { "sequence": "MAAPPDSQDELLPLTSPGSQWLGDRGEGEDEAVTPKGAQPAPQAGEPGSGLGAGAREASQLELGSGPARPPPVAMETASTGMADVSRATDHTFATAARDGGGVCYTSLISDICYPPREDSTYFTGILQKENGHIATSESPEEVRTTRPSFPDVPVTEPRGFFSSDSGIEMTPAESTKVSKILADPIDQMKAEACKYIDITRPEEVRDQEQCHPKAEEKDLDLKNKDTEISDQSEEAREAEKPTPVEGKILKDHLFEESTFALYVDDISEEQHSAPVVTAPVKITLTEIEPSVDTATPEKTPEKQDICLKPSPDTVPTVTVSEPEDDSPGSVTPPSSGTEPSAAESQGKCSISEDELITAIKEAKGLSYETTESPRSAGQVVDRPEAKARSGLPTIPSPLDHEASSAESGDSEIELVSEDPLAAEDALPSGYVTFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEESPKREQDSPLMKPGALDAIREEPGARAEEHAPSQRGLVEFPSAIPQTGPKLPPGDGAPASEEPSLPPKPVETASSDQSSPATGVPGPLGPGVAPPLLFLNKQKAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVIKIPVISSYS", "length": 765, "header": "tr|A0A5G2QEA3-1|A0A5G2QEA3_PIG Computationally mapped isoform of Reticulon OS=Sus scrofa OX=9823 GN=RTN1 PE=1 SV=1 CANONICAL=I3LBH0-1" }, "locus": { "chromosome": "1", "start_pos": 188925855, "end_pos": 188709285, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080532.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080532.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062984.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062984.1" } ] } }, { "isoform_ac": "A0A5G2QSP7-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0/entry#A0A5G2QSP7-1", "sequence": { "sequence": "TLFLTAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKRHAE", "length": 193, "header": "tr|A0A5G2QSP7-1|I3LBH0_PIG Computationally mapped isoform of Reticulon OS=Sus scrofa OX=9823 GN=RTN1 PE=1 SV=1 CANONICAL=I3LBH0-1" }, "locus": { "chromosome": "1", "start_pos": 188718424, "end_pos": 188705095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083904.1", "url": "https://www.ensembl.org/id/ENSSSCT00000083904.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000067955.1", "url": "https://www.ensembl.org/id/ENSSSCP00000067955.1" } ] } }, { "isoform_ac": "A0A8W4F995-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0/entry#A0A8W4F995-1", "sequence": { "sequence": "MAAPPDSQDELLPLTSPGSQWLGDRGEGEDEAVTPKGAQPAPQAGEPGSGLGAGAREASQLELGSGPARPPPVAMETASTGMADVSRATDHTFATAARDGGGVCYTSLISDICYPPREDSTYFTGILQKENGHIATSESPEEVRTTRPSFPDVPVTEPRGFFSSDSGIEMTPAESTKVSKILADPIDQMKAEACKYIDITRPEEVRDQEQCHPKAEEKDLDLKNKDTEISDQSEEAREAEKPTPVEGKILKDHLFEESTFALYVDDISEEQHSAPVVTAPVKITLTEIEPSVDTATPEKTPEKQDICLKPSPDTVPTVTVSEPEDDSPGSVTPPSSGTEPSAAESQGKCSISEDELITAIKEAKGLSYETTESPRSAGQVVDRPEAKARSGLPTIPSPLDHEASSAESGDSEIELVSEDPLAAEDALPSGYVTFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEESPKREQDSPLMKPGALDAIREEPGARAEEHAPSQRGLVEFPSAIPQTGPKLPPGDGAPASEEPSLPPKPVETASSDQSSPATGVPGPLGPGVAPPLLFLNKQKAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAK", "length": 757, "header": "tr|A0A8W4F995-1|A0A8W4F995_PIG Computationally mapped isoform of Reticulon OS=Sus scrofa OX=9823 GN=RTN1 PE=1 SV=1 CANONICAL=I3LBH0-1" }, "locus": { "chromosome": "1", "start_pos": 188925855, "end_pos": 188709910, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000096010.1", "url": "https://www.ensembl.org/id/ENSSSCT00000096010.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075400.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075400.1" } ] } }, { "isoform_ac": "A0A8W4FG65-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0/entry#A0A8W4FG65-1", "sequence": { "sequence": "SLFLSQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVIKIPVISSYS", "length": 177, "header": "tr|A0A8W4FG65-1|A0A8W4FG65_PIG Computationally mapped isoform of Reticulon OS=Sus scrofa OX=9823 GN=RTN1 PE=1 SV=1 CANONICAL=I3LBH0-1" }, "locus": { "chromosome": "1", "start_pos": 188715448, "end_pos": 188709285, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102644.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102644.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000078235.1", "url": "https://www.ensembl.org/id/ENSSSCP00000078235.1" } ] } }, { "isoform_ac": "I3L6J1-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0/entry#I3L6J1-1", "sequence": { "sequence": "MAAPPDSQDELLPLTSPGSQWLGDRGEGEDEAVTPKGAQPAPQAGEPGSGLGAGAREASQLELGSGPARPPPVAMETASTGMADVSRATDHTFATAARDGGGVCYTSLISDICYPPREDSTYFTGILQKENGHIATSESPEEVRTTRPSFPDVPVTEPRGFFSSDSGIEMTPAESTKVSKILADPIDQMKAEACKYIDITRPEEVRDQEQCHPKAEEKDLDLKNKDTEISDQSEEAREAEKPTPVEGKILKDHLFEESTFALYVDDISEEQHSAPVVTAPVKITLTEIEPSVDTATPEKTPEKQDICLKPSPDTVPTVTVSEPEDDSPGSVTPPSSGTEPSAAESQGKCSISEDELITAIKEAKGLSYETTESPRSAGQVVDRPEAKARSGLPTIPSPLDHEASSAESGDSEIELVSEDPLAAEDALPSGYVTFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEESPKREQDSPLMKPGALDAIREEPGARAEEHAPSQRGLVEFPSAIPQTGPKLPPGDGAPASEEPSLPPKPVETASSDQSSPATGVPGPLGPGVAPPLLFLNKQKAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKRHAE", "length": 770, "header": "tr|I3L6J1-1|I3LBH0_PIG Computationally mapped isoform of Reticulon OS=Sus scrofa OX=9823 GN=RTN1 PE=1 SV=2 CANONICAL=I3LBH0-1" }, "locus": { "chromosome": "1", "start_pos": 188925855, "end_pos": 188705095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022854.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022854.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019642.2", "url": "https://www.ensembl.org/id/ENSSSCP00000019642.2" } ] } }, { "isoform_ac": "I3LBH0-1", "url": "https://www.uniprot.org/uniprotkb/I3LBH0/entry#I3LBH0-1", "sequence": { "sequence": "MQATADSTKMDCVWSNWKSQAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKRHAE", "length": 208, "header": "tr|I3LBH0-1|I3LBH0_PIG Isoform 1 of Reticulon OS=Sus scrofa OX=9823 GN=RTN1 PE=1 SV=1 CANONICAL=I3LBH0-1" }, "locus": { "chromosome": "1", "start_pos": 188729601, "end_pos": 188705095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032115.3", "url": "https://www.ensembl.org/id/ENSSSCT00000032115.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021390.1", "url": "https://www.ensembl.org/id/ENSSSCP00000021390.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3L6J1", "url": "https://www.uniprot.org/uniprotkb/I3L6J1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "E1JHT6-1", "protein_name": "Reticulon-like protein", "gene_name": "Rtnl1", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MDRNFDELKKEAAATNEDIFKQAQRAYEDSALGGDTGNVSGGAQDDNAHTEHYFANEQKKLDFGDAQEFVQRLAADAKDAKLDLDTKFAQKTDDFEDFLRDAGKEVKQGISGLTTDFMNAERGFSAPLAPFSETVAQAPVIPAQAPAVPDHAPAVPAPVAPAPAVPAPLPVEEDLLGSFTDQPSAPLQAFQPTAPSTANFYDDEEDDFLGKPTTAAPAAPVAPLTKANQDSDTESPSVSYTPSPAKKPIVDALKDQDNEKFISSEDLASDFKEEPRSAPTPAPAPAPILDAAPAVAPAPVAVPVSVPVAKPQPVPVAVPVTTALITDLDDEEVVFKPTVQEAPKAPTIAAPVVEPKPEPPKPKVEPAKPKVVPVAPVESTQPQPKIASVEEIFCKYGLDAWFKPERLHPQVESLIYWRDVKKSGIVFGAGLITLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAVQKTNEGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVILWVFTYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDTHLDLVRSKLTEITDKIRVAIPIGNKKPEAAAESEKDK", "length": 607 }, "evidence": [ { "id": "I3LBH0", "url": "https://omabrowser.org/oma/group/I3LBH0/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q16799-1", "protein_name": "Reticulon-1", "gene_name": "RTN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAAPGDPQDELLPLAGPGSQWLRHRGEGENEAVTPKGATPAPQAGEPSPGLGARAREAASREAGSGPARQSPVAMETASTGVAGVSSAMDHTFSTTSKDGEGSCYTSLISDICYPPQEDSTYFTGILQKENGHVTISESPEELGTPGPSLPDVPGIESRGLFSSDSGIEMTPAESTEVNKILADPLDQMKAEAYKYIDITRPEEVKHQEQHHPELEDKDLDFKNKDTDISIKPEGVREPDKPAPVEGKIIKDHLLEESTFAPYIDDLSEEQRRAPQITTPVKITLTEIEPSVETTTQEKTPEKQDICLKPSPDTVPTVTVSEPEDDSPGSITPPSSGTEPSAAESQGKGSISEDELITAIKEAKGLSYETAENPRPVGQLADRPEVKARSGPPTIPSPLDHEASSAESGDSEIELVSEDPMAAEDALPSGYVSFGHVGGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEESPKREQDSPPMKPSALDAIREETGVRAEERAPSRRGLAEPGSFLDYPSTEPQPGPELPPGDGALEPETPMLPRKPEEDSSSNQSPAATKGPGPLGPGAPPPLLFLNKQKAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINAVVAKIQAKIPGAKRHAE", "length": 776 }, "evidence": [ { "id": "I3LBH0", "url": "https://omabrowser.org/oma/group/I3LBH0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q64548-1", "protein_name": "Reticulon-1", "gene_name": "Rtn1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAAPPDLQDEPLSPANPGSQLFGGRGEGEEATPKGARPAQQDGEPAWGSGAGAGVVSSRGLCSGPARSPPVAMETASTGVAAVPDALDHSSSPTLKDGEGACYTSLISDICYPPREDSAYFTGILQKENGHITTSESPEELGTPGPSLPEVPGTEPHGLLSSDSGIEMTPAESTEVNKILADPLDQMKAEACKYIDITRPQEAKGQEEQSPGLEDKDLDFKDKDSEVSTKPEGVHAPNQPSPVEGKLIKDNLFEESTFAPYIDELSDEQHRMSLVTAPVKITLTEIGPPVMTATHETIPEKQDLCLKPSPDTVPTVTVSEPEDDSPGSVTPPSSGTEPSAAESQGKGSVSEDELIAAIKEAKGLSYETTESPRPVGQAADRPKVKARSGLPTIPSSLDQEASSAESGDSEIELVSEDPMASEDALPSGYVSFGHVSGPPPSPASPSIQYSILREEREAELDSELIIESCDASSASEESPKREQDSPPMKPGVLDAIREETSSRATEERAPSHQGPVEPDPILSFTPVTLQSRPEPSSGDGAPVPEPPKSQQQKPEEEAVSSSQSPAATEIPGPLGSDLVPPLPFFNKQKAIDLLYWRDIKQTGIVFGSFLLLLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQAKIPGAKRHAE", "length": 777 }, "evidence": [ { "id": "I3LBH0", "url": "https://omabrowser.org/oma/group/I3LBH0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 6, "go_terms": [ { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "pmid": "" }, { "name": "Golgi membrane", "id": "GO:0000139", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000139", "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "pmid": "" }, { "name": "postsynaptic density", "id": "GO:0014069", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0014069", "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "pmid": "" }, { "name": "dendrite", "id": "GO:0030425", "url": 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"id": "GO:0007420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007420", "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "pmid": "" }, { "name": "neuron differentiation", "id": "GO:0030182", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030182", "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "pmid": "" }, { "name": "endoplasmic reticulum tubular network formation", "id": "GO:0071787", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0071787", "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "pmid": "" }, { "name": "endoplasmic reticulum tubular network membrane organization", "id": "GO:1990809", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990809", "evidence": [ { "database": "UniProtKB", "id": "I3LBH0", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LBH0-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 208, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LBH0-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LBH0" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LBH0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LBH0" }, { "id": "PS50845", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50845" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Reticulon", "eco_id": "ECO_0000259", "start_pos": 21, "end_pos": 208, "start_aa": "Ala", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 116, "end_pos": 118 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LMW6-1", "uniprot_ac": "I3LMW6", "uniprot_id": "I3LMW6_PIG", "mass": { "chemical_mass": 73557.0, "monoisotopic_mass": 73557.0 }, "refseq": {}, "gene_names": [ { "name": "SPART", "type": "recommended", "evidence": [ { "id": "I3LMW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ] } ], "protein_names": [ { "name": "Spartin", "type": "recommended", "evidence": [ { "id": "I3LMW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LMW6/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Lipophagy receptor that plays an important role in lipid droplet (LD) turnover in motor neurons. Localizes to LDs and interacts with components of the autophagy machinery, such as MAP1LC3A/C proteins to deliver LDs to autophagosomes for degradation via lipophagy. Lipid transfer protein required for lipid droplet degradation, including by lipophagy. Can bind and transfer all lipid species found in lipid droplets, from phospholipids to triglycerides and sterol esters but the direction of lipid transfer by spartin and its cargos are unknown. May be implicated in endosomal trafficking, or microtubule dynamics, or both. Participates in cytokinesis.", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6#function" }, { "database": "UniProtKB", "id": "ARBA00054810", "url": "https://www.uniprot.org/uniprotkb/ARBA00054810#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SPART", "url": "https://www.uniprot.org/uniprotkb/I3LMW6", "locus": { "chromosome": "11", "start_pos": 12313335, "end_pos": 12346204, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000024635", "url": "https://www.ensembl.org/id/ENSSSCG00000024635" } ] } } ], "crossref": [ { "id": "I3LMW6", "url": "https://alphafold.ebi.ac.uk/entry/I3LMW6", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000024635", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000024635", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02679", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02679", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "IPR007330", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007330", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR009686", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009686", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036181", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036181", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR045036", "url": "https://www.ebi.ac.uk/interpro/entry/IPR045036", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "WQGMECA", "url": "https://omabrowser.org/oma/group/WQGMECA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR21068", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21068", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR21068:SF43", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR21068:SF43", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF06911", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF06911", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LMW6-1", "url": "https://www.uniprot.org/uniprotkb/I3LMW6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEEMEQEPQNEEPAEIKIIKEAYKKAFLFVNKGLNTDELGQKEEAKNYYRQGIGHLLRGISISSTDPECVGPEWESARQMQQKMKETLQNVRTRLEILEKGLATSLRNDLQEVPKLYPEFPPKDMSEKSPEPQSFGSPPQHSEVNGNASAASTQSVSIPNTLSFSSQSHPSEAPPAYTPQAAEGHYTVSYGTESGEFSSVGENFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDAVLNRPPGFLQVCDWLYPLVPDRSPVLKCTVGAYMFPDTMLQASGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWDRAEGENEFQIPGRSRCPSDQLREASGTDVRQLDQGSKDVRHKGKRGKKESKAKGSSSEEVNLSHIVPYEPVSEEKAKELPEWSEKVAQNILSGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVTKGLHIAKQATGGAAKVSQFLVDGVCTVASCVGKELAPHVKKHGSKLVPESLKKDRNGKSALDGAMVVAASSVQGFSTVWQGLECAKCIVNNVSAETVQTVRYKYGHTAGEATHDAVDSAINVGVTAYNIDNIGIKAMVKKTAKQTGHTLLEDYKIIDKSKGEKRGGAGANVKEEKGEQTEELEKNGAKKKDK", "length": 672, "header": "tr|I3LMW6-1|I3LMW6_PIG Isoform 1 of Spartin OS=Sus scrofa OX=9823 GN=SPART PE=1 SV=3 CANONICAL=I3LMW6-1" }, "isoforms": [ { "isoform_ac": "I3LMW6-1", "url": "https://www.uniprot.org/uniprotkb/I3LMW6/entry#I3LMW6-1", "sequence": { "sequence": "MEEMEQEPQNEEPAEIKIIKEAYKKAFLFVNKGLNTDELGQKEEAKNYYRQGIGHLLRGISISSTDPECVGPEWESARQMQQKMKETLQNVRTRLEILEKGLATSLRNDLQEVPKLYPEFPPKDMSEKSPEPQSFGSPPQHSEVNGNASAASTQSVSIPNTLSFSSQSHPSEAPPAYTPQAAEGHYTVSYGTESGEFSSVGENFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDAVLNRPPGFLQVCDWLYPLVPDRSPVLKCTVGAYMFPDTMLQASGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWDRAEGENEFQIPGRSRCPSDQLREASGTDVRQLDQGSKDVRHKGKRGKKESKAKGSSSEEVNLSHIVPYEPVSEEKAKELPEWSEKVAQNILSGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVTKGLHIAKQATGGAAKVSQFLVDGVCTVASCVGKELAPHVKKHGSKLVPESLKKDRNGKSALDGAMVVAASSVQGFSTVWQGLECAKCIVNNVSAETVQTVRYKYGHTAGEATHDAVDSAINVGVTAYNIDNIGIKAMVKKTAKQTGHTLLEDYKIIDKSKGEKRGGAGANVKEEKGEQTEELEKNGAKKKDK", "length": 672, "header": "tr|I3LMW6-1|I3LMW6_PIG Isoform 1 of Spartin OS=Sus scrofa OX=9823 GN=SPART PE=1 SV=3 CANONICAL=I3LMW6-1" }, "locus": { "chromosome": "11", "start_pos": 12346054, "end_pos": 12314550, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027170.5", "url": "https://www.ensembl.org/id/ENSSSCT00000027170.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025438.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025438.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0XY54-1", "protein_name": "Spartin", "gene_name": "SPG20", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEQLRDPVVQEHANIKAINEEYTKAFIFINKGLQADELGQKGEARNYYKQGLDHLLQGLSIPSQDPACVGPQWESARQMQQKMKETLQNVRTRLDILEQNTPPVGASPAAMDAPAGVSKLYPPIPSTEKPERPPPPNALFVPSQPPAADGSFAAASQGQLPSMSPSSAKPLCLPNEAPPAYTPQATNGHFTVSYGTDSGEFSSVSEDYYRKCTQPPPLQNLGVDADELILIPQGVQIFFVTPDGQVSAPSYPGYLRIVKFLDTESEMAQNRPPAFLQVCDWLYPLMCNQSPVLCCNTGVYMFPDMMSQIPGSYVGVVLSSELPAADRELFEDLLKQMSDLRLQVPGSYERVGLPSELPATERAHFEDKLKQLSGHKVQPPEASSDAINLPQTVHIQPHPEEEENQKELPEWSEKVARGILSGASWVSWGLVKGAEFTGKAIHKGASKLREHIQPEEKPLEVNPTVAKGLHVAKQATGGAVKVSQFLVEGVCSIASCVGKELAPHVKKHGSKLVPESLKKDKDGKSALDGALVVAASGVQGFSTVWQGLESAAKCIAKSVSTETVKTVKHKYGDDAGRATDNAMSSAINVGVTAFNIDHIGIKAVVKKTAKETGHAVLDEYKVLDKEKKDKK", "length": 631 }, "evidence": [ { "id": "I3LMW6", "url": "https://omabrowser.org/oma/group/I3LMW6/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A0A9J7JB28-1", "protein_name": "Spartin", "gene_name": "Spart", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MEQEPDNGEPAEIKILKEAYEKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISIMAAEPGCTGPAWESARQMQQKMKETLQNVRTRLEILEKGLATSLRNDLQDVPKLYPEFPPKDTCKKSPEPDSDSSAPQHAEVDGSASAAGAASAGPSAALSAGPLPSCPTEAPPAYTLQAAEGHYTVSYGTDSGEFSSVGEDFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPDRSPVLKCTVGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWNRAEGEDEFQIPGRARHPSESPKEASGTYVRQAGSSGSSIDQGSKDARRKGKRGKKTKDSSSEEVNLSQIVPCEPSSEEKSKELPEWSEKVAHNILSGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVTRGLYIAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHGSKLVPESLKRDKDGKSALDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGHNAGEATHNVVDSAINVGLTAYNIDNIGIKAMVKKTAKQTGHTLLEDYQIIDSSQKESQGEAASTVVRRNTEKQTEEEKKGAEKKDK", "length": 675 }, "evidence": [ { "id": "I3LMW6", "url": "https://omabrowser.org/oma/group/I3LMW6/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "A0JNJ3-1", "protein_name": "Spartin", "gene_name": "SPART", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEQGPQDGEPIEIKIIKEAYKKAFVFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSTDPEYTGPEWESARQMQQKMKETLQNVRTRLEILEKGLATSLRNDLQEVPKLYPEFPPKDMSEKSPEPQSLSSLPQHSEVNGSTSTASAESSSTPTTLSLPCQSHPSEAPPAYTPQAAEGHYTVSYGTESGEFSSVGENFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTFLNRPPGFLQVCDWLYPLVPDRSPVLKCTVGAYMFPDTMLQASGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQTNWDRAEGENEFQIPGISGSASDQLKEASGTDVRQLDPSSKDVRQKGKRGKKTKGTSSEEVNLSHIVPCEPVSEEKAKELPEWSEKVAHNILSGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVTKGLYMAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHGSKLVPESLKKDRNGKSTLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGHTAGEATHNAVDSAINVGVTAYNIDNIGIKAMVKKTAKQTGHTLLEDYKIIDNSKGENPGGGASANLKGEKDEQKEGPEKNGAKKKDK", "length": 668 }, "evidence": [ { "id": "I3LMW6", "url": "https://omabrowser.org/oma/group/I3LMW6/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "E9PT90-1", "protein_name": "Spartin", "gene_name": "Spart", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MNGARAFEMERGAENGEPPEMKIIKEAYEKAFMFVNKGLNTDELGQKEEAKTYYKQGIGHLLRGISIAAAEPGHTGPAWEAARQMQQKMKETLQNVRTRLEILEKGLATSLRNDLQDVPKLYPEFPPKGTCKKSPEAESAPQHAEVDGSASAAGAGPSAAPSALPLPSPGCPAEAPPAYTPQAAEGHYTVSYGTDSGEFSSVGEDFYRNRSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPDRSPVLKCTVGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWNREEEEEEEEEEDEFQIPGRVKELPKEASGTDVRQSSSSGSSIDQGSKDARHKGKRGKKTKDSSSEEVNLRQIVPCEPSSEEKSKDLPEWSEKVAHNILSGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVTRGLYIAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHGSKLVPESLKRDKDGKSTLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGHNAGEATHNAVDSAINVGVTAYNIDNIGIKAMVKKTAKQTGHTLLEDYQIIESPQRESQGGATSTEGTRDVERKMEEEKKGAKKKDK", "length": 682 }, "evidence": [ { "id": "I3LMW6", "url": "https://omabrowser.org/oma/group/I3LMW6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8N0X7-1", "protein_name": "Spartin", "gene_name": "SPART", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEQEPQNGEPAEIKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEKGLATSLQNDLQEVPKLYPEFPPKDMCEKLPEPQSFSSAPQHAEVNGNTSTPSAGAVAAPASLSLPSQSCPAEAPPAYTPQAAEGHYTVSYGTDSGEFSSVGEEFYRNHSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPDRSPVLKCTAGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWNRAEEENEFQIPGRTRPSSDQLKEASGTDVKQLDQGNKDVRHKGKRGKRAKDTSSEEVNLSHIVPCEPVPEEKPKELPEWSEKVAHNILSGASWVSWGLVKGAEITGKAIQKGASKLRERIQPEEKPVEVSPAVTKGLYIAKQATGGAAKVSQFLVDGVCTVANCVGKELAPHVKKHGSKLVPESLKKDKDGKSPLDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGYNAGEATHHAVDSAVNVGVTAYNINNIGIKAMVKKTATQTGHTLLEDYQIVDNSQRENQEGAANVNVRGEKDEQTKEVKEAKKKDK", "length": 666 }, "evidence": [ { "id": "I3LMW6", "url": "https://omabrowser.org/oma/group/I3LMW6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q8R1X6-1", "protein_name": "Spartin", "gene_name": "Spart", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEREPENGEPAEIKIIKEAYEKAFMFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISIAAAEPGHTGPAWEAARQMQQKMKETLQNVRTRLEILEKGLATSLRNDLQDVPKLYPEFPPKDACKKSPEQESVSTAPQRAEVDGSASAACAGPSGAPSALPVPSPSCPAEAPPAYSPQAAEGHYTVSYGTDSGEFSSVGEDFYRNRSQPPPLETLGLDADELILIPNGVQIFFVNPAGEVSAPSYPGYLRIVRFLDNSLDTVLNRPPGFLQVCDWLYPLVPDRSPVLKCTVGAYMFPDTMLQAAGCFVGVVLSSELPEDDRELFEDLLRQMSDLRLQANWNREEDEFQIPGRSSHPSEPPKEASGTDVRQSSSSGSSIDQGSKDARHKGKRGKKTKDSSEEVNLSQIVPCEPSSEEKSKELPEWSEKVAHNILSGASWVSWGLVKGAEFTGKAIQKGASKLRERIQPEEKPVEVSPAVTRGLYIAKQATGGAAKVSQLLVDGVCTVANCVGKELAPHVKKHGSKLVPESLKRDKDGKSALDGAMVVAASSVQGFSTVWQGLECAAKCIVNNVSAETVQTVRYKYGHNAGEATHNAVDSAINVGLTAYNIDNIGIKAMVKKTAKQTGHTLLEDYQIVERPQRESQGGATSTEGRRDIGKQVEEEKPGAGKKDK", "length": 671 }, "evidence": [ { "id": "I3LMW6", "url": "https://omabrowser.org/oma/group/I3LMW6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 5, "go_terms": [ { "name": "mitochondrial outer membrane", "id": "GO:0005741", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005741", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "lipid droplet", "id": "GO:0005811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005811", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "cytosol", "id": "GO:0005829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005829", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "synapse", "id": "GO:0045202", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045202", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "midbody", "id": "GO:0030496", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030496", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "lipid transport", "id": "GO:0006869", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006869", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "lipid catabolic process", "id": "GO:0016042", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016042", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "lipophagy", "id": "GO:0061724", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061724", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "midbody abscission", "id": "GO:0061952", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061952", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "ubiquitin protein ligase binding", "id": "GO:0031625", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031625", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" }, { "name": "lipid binding", "id": "GO:0008289", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008289", "evidence": [ { "database": "UniProtKB", "id": "I3LMW6", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 147, "end_pos": 149, "annotation": "n_glycosylation_sequon" }, { "start_pos": 207, "end_pos": 209, "annotation": "n_glycosylation_sequon" }, { "start_pos": 404, "end_pos": 406, "annotation": "n_glycosylation_sequon" }, { "start_pos": 571, "end_pos": 573, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LMW6-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 672, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LMW6-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LMW6" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LMW6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LMW6" }, { "id": "SM00745", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00745" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "MIT", "eco_id": "ECO_0000259", "start_pos": 19, "end_pos": 97, "start_aa": "Ile", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 147, "end_pos": 149 }, { "start_pos": 207, "end_pos": 209 }, { "start_pos": 404, "end_pos": 406 }, { "start_pos": 571, "end_pos": 573 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LID3-1", "uniprot_ac": "I3LID3", "uniprot_id": "I3LID3_PIG", "mass": { "chemical_mass": 47376.0, "monoisotopic_mass": 47376.0 }, "refseq": {}, "gene_names": [ { "name": "METTL9", "type": "recommended", "evidence": [ { "id": "I3LID3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LID3" } ] } ], "protein_names": [ { "name": "Methyltransferase 9, His-X-His N1(pi)-histidine", "type": "synonym", "evidence": [ { "id": "I3LID3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LID3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LID3", "url": "https://www.uniprot.org/uniprotkb/I3LID3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "METTL9", "url": "https://www.uniprot.org/uniprotkb/I3LID3", "locus": { "chromosome": "3", "start_pos": 23670063, "end_pos": 23722198, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000030373", "url": "https://www.ensembl.org/id/ENSSSCG00000030373" } ] } } ], "crossref": [ { "id": "I3LID3", "url": "https://alphafold.ebi.ac.uk/entry/I3LID3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000030373", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000030373", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd02440", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02440", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100628086", "url": "https://www.ncbi.nlm.nih.gov/gene/100628086", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007884", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007884", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR029063", "url": "https://www.ebi.ac.uk/interpro/entry/IPR029063", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PYMHYVE", "url": "https://omabrowser.org/oma/group/PYMHYVE/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR12890", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12890", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12890:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12890:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF05219", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF05219", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A4X1V1J8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V1J8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1V1J8-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V1J8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LID3", "url": "https://www.uniprot.org/uniprotkb/I3LID3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LID3-1", "url": "https://www.uniprot.org/uniprotkb/I3LID3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGRRERAPEGARRSSAYVVRVETGARGGGVPRAERKGEARRLRTARSSPPPPPASALKGAGWASWARWLEPGQRQLRLEAAARPPRPGAGGDRSERPRPPMRLFVGWLCLSLASVWLARRMWTLRSPLTRSLYVNMTSGPGGPAAAAGGRKDNHQWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENVGGKWDKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAVFVLKPV", "length": 418, "header": "tr|I3LID3-1|I3LID3_PIG Isoform 1 of Methyltransferase 9, His-X-His N1(pi)-histidine OS=Sus scrofa OX=9823 GN=METTL9 PE=1 SV=2 CANONICAL=I3LID3-1" }, "isoforms": [ { "isoform_ac": "A0A4X1V1J8-1", "url": "https://www.uniprot.org/uniprotkb/I3LID3/entry#A0A4X1V1J8-1", "sequence": { "sequence": "MDRRTVSWDTRFYEKWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENVGGKWDKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAVFVLKPV", "length": 278, "header": "tr|A0A4X1V1J8-1|I3LID3_PIG Computationally mapped isoform of Methyltransferase 9, His-X-His N1(pi)-histidine OS=Sus scrofa OX=9823 GN=METTL9 PE=1 SV=1 CANONICAL=I3LID3-1" }, "locus": { "chromosome": "3", "start_pos": 23722146, "end_pos": 23670565, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046881.3", "url": "https://www.ensembl.org/id/ENSSSCT00000046881.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032386.1", "url": "https://www.ensembl.org/id/ENSSSCP00000032386.1" } ] } }, { "isoform_ac": "I3LID3-1", "url": "https://www.uniprot.org/uniprotkb/I3LID3/entry#I3LID3-1", "sequence": { "sequence": "MGRRERAPEGARRSSAYVVRVETGARGGGVPRAERKGEARRLRTARSSPPPPPASALKGAGWASWARWLEPGQRQLRLEAAARPPRPGAGGDRSERPRPPMRLFVGWLCLSLASVWLARRMWTLRSPLTRSLYVNMTSGPGGPAAAAGGRKDNHQWYVCNREKLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPDQFQRLLKINPDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENVGGKWDKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDAVFVLKPV", "length": 418, "header": "tr|I3LID3-1|I3LID3_PIG Isoform 1 of Methyltransferase 9, His-X-His N1(pi)-histidine OS=Sus scrofa OX=9823 GN=METTL9 PE=1 SV=2 CANONICAL=I3LID3-1" }, "locus": { "chromosome": "3", "start_pos": 23720269, "end_pos": 23670565, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030167.3", "url": "https://www.ensembl.org/id/ENSSSCT00000030167.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023838.2", "url": "https://www.ensembl.org/id/ENSSSCP00000023838.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A4X1V1J8", "url": "https://www.uniprot.org/uniprotkb/A0A4X1V1J8" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [ { "uniprot_canonical_ac": "Q9W1H1-1", "protein_name": "Methyltransferase-like protein 9", "gene_name": "Mettl9", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAVYRPRGTLARVIHAKFHNDNSLEDIDTRKWYCLNHELPPRFQSKFVPLEPDATTVSWLERTKALSANIWTHLWHALARSILQFFMTQTDINGFLKRGSMFILSEEQFRKLLVAGGFQPASGQEPVTLLDIGAGDGEISLRVANTVSELSGSAGLRVFATEASWTMRDRLKKLNFNVITEIDGLQNLELILCLNVLDRCFDSFKLLEDIHLALAPNGRAVVALVLPYMHYVETNTSHLPLRPLLENNGRQASFEEEAARFMELLENCGYRVEAWTKAPYLCEGDLHQSFYWLIDLIVVISKKTF", "length": 305 }, "evidence": [ { "id": "I3LID3", "url": "https://omabrowser.org/oma/group/I3LID3/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "protein-L-histidine N-pros-methyltransferase activity", "id": "GO:0106370", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0106370", "evidence": [ { "database": "UniProtKB", "id": "I3LID3", "url": "https://www.uniprot.org/uniprotkb/I3LID3" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrion", "id": "GO:0005739", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005739", "evidence": [ { "database": "UniProtKB", "id": "I3LID3", "url": "https://www.uniprot.org/uniprotkb/I3LID3" } ], "pmid": "" }, { "name": "endoplasmic reticulum", "id": "GO:0005783", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005783", "evidence": [ { "database": "UniProtKB", "id": "I3LID3", "url": "https://www.uniprot.org/uniprotkb/I3LID3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 135, "end_pos": 137, "annotation": "n_glycosylation_sequon" }, { "start_pos": 186, "end_pos": 188, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LID3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 418, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LID3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LID3" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 135, "end_pos": 137 }, { "start_pos": 186, "end_pos": 188 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LD34-1", "uniprot_ac": "I3LD34", "uniprot_id": "I3LD34_PIG", "mass": { "chemical_mass": 103002.0, "monoisotopic_mass": 103002.0 }, "refseq": { "ac": "XP_020938633", "name": "membrane-spanning 4-domains subfamily A member 14", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938633" }, "gene_names": [ { "name": "MS4A14", "type": "recommended", "evidence": [ { "id": "I3LD34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD34" } ] }, { "name": "MS4A14", "type": "synonym", "evidence": [ { "id": "XP_020938633", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938633" } ] } ], "protein_names": [ { "name": "Membrane spanning 4-domains A14", "type": "synonym", "evidence": [ { "id": "I3LD34", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LD34/entry#names_and_taxonomy" } ] }, { "name": "membrane-spanning 4-domains subfamily A member 14", "type": "synonym", "evidence": [ { "id": "XP_020938633", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938633" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LD34", "url": "https://www.uniprot.org/uniprotkb/I3LD34" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MS4A14", "url": "https://www.uniprot.org/uniprotkb/I3LD34", "locus": {} } ], "crossref": [ { "id": "I3LD34", "url": "https://alphafold.ebi.ac.uk/entry/I3LD34", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000022114", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000022114", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100620949", "url": "https://www.ncbi.nlm.nih.gov/gene/100620949", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR007237", "url": "https://www.ebi.ac.uk/interpro/entry/IPR007237", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR030417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR030417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620949", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620949", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LD34", "url": "https://www.orthodb.org/?gene=I3LD34", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR23320", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23320", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR23320:SF10", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR23320:SF10", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04103", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04103", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020938633", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020938633", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A4X1VPR6", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VPR6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A4X1VPR6-1", "url": "https://www.uniprot.org/uniprotkb/A0A4X1VPR6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHP5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHP5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QHP5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QHP5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LD34", "url": "https://www.uniprot.org/uniprotkb/I3LD34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LD34-1", "url": "https://www.uniprot.org/uniprotkb/I3LD34-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MESSEEEVKRSTQVITIQPNETVLTAFPYGPHTSLLDVLKGEPRVLGVIQILLALIIAGIGAIFAFNYLNFAQRFPLVFFIGYPFWGAFTFIIAGYFTGSNGDRKCLGQGVTSMNAISSLVAAAGILFTIISYRYQHKYCQAPSLEGTCAISRVLYSGILSVLLIISIVELSISVTVVSFRSNCLTRSDEIVFFLPSDIAQDRELSATEENAIIQFEVQEESTSDVSTTNIQPVFFGGYIFFKLRVTKNSLAFQHAGRRGSISYCTASLSESGEQQKYLLEPLSLYDREPESKTLPPVFEKKSSEITTDTEQLSDEDLQAVTAQFTRKKIQLQQDKPLPTKVSPSYPVKIIPYLPPQALPSQALPEQALLSETPTSHVTKSNVLKSKDTPSQHIPSKNTQSQATTDKYLPSLDMHSQDTSFQRQVLPLKALPFEAPKLLDVHSSNTQHLDQQSLDLKLQNIQSQEHKSMHLLYQDIQSEVKLLTEEWKSEVELYSKRSSKQHFQYQESKGRQSLKQKSLDLQIQDQQAPRRKSLDKHIKDRLSPHSHYVDKQVQTSPQFPYQQTEDLQAQEEKPPQQVSQDLQFQIQKYHDWQSPDWKIQNWQTSGQQSQNWRTQDWKNKEWKTQEWQFEMQHSQNWESQAWQTRDQLVKESRNQRALFQETQTVHAVIPPHLDEQSQDIPHQDSQYQDKDQLDLQSTGIQKEDLEKDAMQIRDVKPEDTSCGSQSPSDLQSQDTKPDLKCPSYQRLIQDLQSTGIQKDDLKTDAMHTGDINPQDMNFGSQAPSDLQSEDKKPHAKCSSNQSSVQEPQSMGIQKENRETEAKQTGDKNPEGMSCGSQTPSDIQSGDMKPDFKCSSYQSSVQDAYFTYMSNIYSEQDVQQNTSTCSTAYKDVTSTTYDPKERQQSED", "length": 906, "header": "tr|I3LD34-1|I3LD34_PIG Isoform 1 of Membrane spanning 4-domains A14 OS=Sus scrofa OX=9823 GN=MS4A14 PE=3 SV=3 CANONICAL=I3LD34-1" }, "isoforms": [ { "isoform_ac": "A0A4X1VPR6-1", "url": "https://www.uniprot.org/uniprotkb/I3LD34/entry#A0A4X1VPR6-1", "sequence": { "sequence": "MESSEEEVKRSTQVITIQPNETVLTAFPYGPHTSLLDVLKGEPRVLGVIQILLALIIAGIGAIFAFNYLNFAQRFPLVFFIGYPFWGAFTVTGYFTGSNGDRKCLGQGVTSMNAISSLVAAAGILFTIISYRYQHKYCQAPSLEGTCAISRVLYSGILSVLLIISIVELSISVTVVSFRSNCLTRSDEIVFFLPSDIAQDRELSATEENAIIQFEVQEESTSDVSTTNIQPVFFGGYIFFKLRVTKNSLAFQHAGRRGSISYCTASLSESGEQQKYLLEPLSLYDREPESKTLPPVFEKKSSEITTDTEQLSDEDLQAVTAQFTRKKIQLQQDKPLPTKVSPSYPVKIIPYLPPQALPSQALPEQALLSETPTSHVTKSNVLKSKDTPSQHIPSKNTQSQATTDKYLPSLDMHSQDTSFQRQVLPLKALPFEAPKLLDVHSSNTQHLDQQSLDLKLQNIQSQEHKSMHLLYQDIQSEVKLLTEEWKSEVELYSKRSSKQHFQYQESKGRQSLKQKSLDLQIQDQQAPRRKSLDKHIKDRLSPHSHYVDKQVQTSPQFPYQQTEDLQAQEEKPPQQVSQDLQFQIQKYHDWQSPDWKIQNWQTSGQQSQNWRTQDWKNKEWKTQEWQFEMQHSQNWESQAWQTRDQLVKESRNQRALFQETQTVHAVIPPHLDEQSQDIPHQDSQYQDKDQLDLQSTGIQKEDLEKDAMQIRDVKPEDTSCGSQSPSDLQSQDTKPDLKCPSYQRLIQDLQSTGIQKDDLKTDAMHTGDINPQDMNFGSQAPSDLQSEDKKPHAKCSSNQSSVQEPQSMGIQKENRETEAKQTGDKNPEGRSLCRLSKGSRTKRVGEE", "length": 847, "header": "tr|A0A4X1VPR6-1|I3LD34_PIG Computationally mapped isoform of Membrane spanning 4-domains A14 OS=Sus scrofa OX=9823 GN=MS4A14 PE=3 SV=1 CANONICAL=I3LD34-1" }, "locus": { "chromosome": "2", "start_pos": 11291136, "end_pos": 11269094, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092702.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092702.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000077299.1", "url": "https://www.ensembl.org/id/ENSSSCP00000077299.1" } ] } }, { "isoform_ac": "A0A5G2QHP5-1", "url": "https://www.uniprot.org/uniprotkb/I3LD34/entry#A0A5G2QHP5-1", "sequence": { "sequence": "MESSEEEVKRSTQVITIQPNETVLTAFPYGPHTSLLDVLKGEPRVLGVIQILLALIIAGIGAIFAFNYLNFAQRFPLVFFIGYPFWGAFTFIIAGYFTGSNGDRKCLGQGVTSMNAISSLVAAAGILFTIISYRYQHKYCQAPSLEGTCAISRVLYSIVFFLPSDIAQDRELSATEENAIIQFEVQEESTSDVSTTNIQPVFFGGYIFFKLRVTKNSLAFQHAGRRGSISYCTASLSESGEQQKYLLEPLSLYDREPESKTLPPVFEKKSSEITTDTEQLSDEDLQAVTAQFTRKKIQLQQDKPLPTKVSPSYPVKIIPYLPPQALPSQALPEQALLSETPTSHVTKSNVLKSKDTPSQHIPSKNTQSQATTDKYLPSLDMHSQDTSFQRQVLPLKALPFEAPKLLDVHSSNTQHLDQQSLDLKLQNIQSQEHKSMHLLYQDIQSEVKLLTEEWKSEVELYSKRSSKQHFQYQESKGRQSLKQKSLDLQIQDQQAPRRKSLDKHIKDRLSPHSHYVDKQVQTSPQFPYQQTEDLQAQEEKPPQQVSQDLQFQIQKYHDWQSPDWKIQNWQTSGQQSQNWRTQDWKNKEWKTQEWQFEMQHSQNWESQAWQTRDQLVKESRNQRALFQETQTVHAVIPPHLDEQSQDIPHQDSQYQDKDQLDLQSTGIQKEDLEKDAMQIRDVKPEDTSCGSQSPSDLQSQDTKPDLKCPSYQRLIQDLQSTGIQKDDLKTDAMHTGDINPQDMNFGSQAPSDLQSEDKKPHAKCSSNQSSVQEPQSMGIQKENRETEAKQTGDKNPEGMSCGSQTPSDIQSGDMKPDFKCSSYQSSVQDAYFTYMSNIYSEQDVQQNTSTCSTAYKDVTSTTYDPKERQQSED", "length": 873, "header": "tr|A0A5G2QHP5-1|I3LD34_PIG Computationally mapped isoform of Membrane spanning 4-domains A14 OS=Sus scrofa OX=9823 GN=MS4A14 PE=3 SV=1 CANONICAL=I3LD34-1" }, "locus": { "chromosome": "2", "start_pos": 11291136, "end_pos": 11269545, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090953.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090953.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063904.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063904.1" } ] } }, { "isoform_ac": "I3LD34-1", "url": "https://www.uniprot.org/uniprotkb/I3LD34/entry#I3LD34-1", "sequence": { "sequence": 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{ "database": "UniProtKB", "id": "I3LD34", "url": "https://www.uniprot.org/uniprotkb/I3LD34" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "cell surface receptor signaling pathway", "id": "GO:0007166", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007166", "evidence": [ { "database": "UniProtKB", "id": "I3LD34", "url": "https://www.uniprot.org/uniprotkb/I3LD34" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 20, "end_pos": 22, "annotation": "n_glycosylation_sequon" }, { "start_pos": 800, "end_pos": 802, "annotation": "n_glycosylation_sequon" }, { "start_pos": 880, "end_pos": 882, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LD34-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 906, "overlap": "1.0", "method": "AlphaFold", "type": 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"evidence": [ { "id": "I3LFY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFY2" } ] } ], "protein_names": [ { "name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1", "type": "synonym", "evidence": [ { "id": "I3LFY2", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LFY2/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LFY2", "url": "https://www.uniprot.org/uniprotkb/I3LFY2" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "B3GNTL1", "url": "https://www.uniprot.org/uniprotkb/I3LFY2", "locus": { "chromosome": "12", "start_pos": 326417, "end_pos": 259916, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027229", "url": 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"http://www.pantherdb.org/panther/family.do?clsAccession=PTHR22916:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00535", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00535", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-913709", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-913709", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2Q6W1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6W1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q6W1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6W1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFW0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QFW0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QFW0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": 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"sequence": { "sequence": "SVILPVHNAEPWLDECLGSVLQQDFEGRLELSIFNDASKDKSMAVIEKWKEKLEASGILVVVGGHDSPSPRGVGYSKNQAVAQSSGAYLCFLDSDDVMMPQRVRLQHAAAAQHPTSIIGCQVQREPPNSTQRYTRWLNQLEPGQLLTQAFTSHGPTVPMPTWFCSRAWFSHVGPFDEGGRGVPEDLLFFYEHLRKGGGVVRVDRSLLMYRYHPAAATHAVLETTIWTLRVRFLEEQALPRWATFTIWNAGRQGRRLYRSLTAESRRKVVAFCDVDENKIQKGFYCHEESQERPKPRVPVLHFRAARPPFVICVKLDLTGGAFEDNLRSLHLREGRDFLHFS", "length": 341, "header": "tr|I3LFY2-1|I3LFY2_PIG Isoform 1 of UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 OS=Sus scrofa OX=9823 GN=B3GNTL1 PE=4 SV=3 CANONICAL=I3LFY2-1" }, "locus": { "chromosome": "12", "start_pos": 325522, "end_pos": 261779, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025124.3", "url": "https://www.ensembl.org/id/ENSSSCT00000025124.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022975.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022975.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q6W1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q6W1" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-913709", "name": "", "url": 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"https://www.ensembl.org/id/ENSSSCP00000068095.1" } ] } }, { "isoform_ac": "A0A5G2R157-1", "url": "https://www.uniprot.org/uniprotkb/I3LSK2/entry#A0A5G2R157-1", "sequence": { "sequence": "MSAPEDEERLLPLAQRWPRASKFLLSGCAATVAELEHATLGYKRHDKLYVASSVSQISATFPLDLTKTRLQIQGEAALARLGHGAREAAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGVRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRMTPWSLVFWLTYEKIREMSGVSPF", "length": 346, "header": "tr|A0A5G2R157-1|I3LSK2_PIG Computationally mapped isoform of Mitochondrial uncoupling protein 4 OS=Sus scrofa OX=9823 GN=SLC25A27 PE=1 SV=1 CANONICAL=I3LSK2-1" }, "locus": { "chromosome": "7", "start_pos": 41453313, "end_pos": 41426408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080682.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080682.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064242.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064242.1" } ] } }, { "isoform_ac": "A0A5G2R3U3-1", "url": "https://www.uniprot.org/uniprotkb/I3LSK2/entry#A0A5G2R3U3-1", "sequence": { "sequence": "MSAPEDEERLLPLAQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGHGAREAAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGVRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRMSPVPFLSKLR", "length": 310, "header": "tr|A0A5G2R3U3-1|I3LSK2_PIG Computationally mapped isoform of Mitochondrial uncoupling protein 4 OS=Sus scrofa OX=9823 GN=SLC25A27 PE=1 SV=1 CANONICAL=I3LSK2-1" }, "locus": { "chromosome": "7", "start_pos": 41447248, "end_pos": 41426408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080274.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080274.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068862.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068862.1" } ] } }, { "isoform_ac": "A0A5G2RFJ3-1", "url": "https://www.uniprot.org/uniprotkb/I3LSK2/entry#A0A5G2RFJ3-1", "sequence": { "sequence": "MSAPEDEERLLPLAQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGHGAREAAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGVRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGSASCDFIVFKEFLKIHSVEKLRSTFFQRLRLRGAFCINHRLTAWFRLSKEKDS", "length": 318, "header": "tr|A0A5G2RFJ3-1|A0A5G2RFJ3_PIG Computationally mapped isoform of Mitochondrial uncoupling protein 4 OS=Sus scrofa OX=9823 GN=SLC25A27 PE=1 SV=2 CANONICAL=I3LSK2-1" }, "locus": { "chromosome": "7", "start_pos": 41447002, "end_pos": 41426408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000068946.2", "url": "https://www.ensembl.org/id/ENSSSCT00000068946.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069799.2", "url": "https://www.ensembl.org/id/ENSSSCP00000069799.2" } ] } }, { "isoform_ac": "A0A8X9AEN2-1", "url": "https://www.uniprot.org/uniprotkb/I3LSK2/entry#A0A8X9AEN2-1", "sequence": { "sequence": "MSAPEDEERLLPLAQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGHGAREAAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGVRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSRNLTKLSSFLFRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRMVKGAYTVMGEDRHTPWSLVFWLTYEKIREMSGVSPF", "length": 316, "header": "tr|A0A8X9AEN2-1|A0A8X9AEN2_PIG Computationally mapped isoform of Solute carrier family 25 member 27 OS=Sus scrofa OX=9823 GN=SLC25A27 PE=1 SV=1 CANONICAL=I3LSK2-1" }, "locus": { "chromosome": "7", "start_pos": 41453313, "end_pos": 41426408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000064761.3", "url": "https://www.ensembl.org/id/ENSSSCT00000064761.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059085.3", "url": "https://www.ensembl.org/id/ENSSSCP00000059085.3" } ] } }, { "isoform_ac": "F1RQQ0-1", "url": "https://www.uniprot.org/uniprotkb/I3LSK2/entry#F1RQQ0-1", "sequence": { "sequence": "MSAPEDEERLLPLAQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGHGAREAAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHIGIYLESSCSQLPVCVVSHFSTAHENTFLLCFQSTLAKTRAVDFAACGRENINLPSKGSRAVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGVRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRMVKLVFFFPFVFVPFVNFNYF", "length": 380, "header": "tr|F1RQQ0-1|F1RQQ0_PIG Computationally mapped isoform of Solute carrier family 25 member 27 OS=Sus scrofa OX=9823 GN=SLC25A27 PE=1 SV=3 CANONICAL=I3LSK2-1" }, "locus": { "chromosome": "7", "start_pos": 41447103, "end_pos": 41426408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000001923.5", "url": "https://www.ensembl.org/id/ENSSSCT00000001923.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000001876.4", "url": "https://www.ensembl.org/id/ENSSSCP00000001876.4" } ] } }, { "isoform_ac": "I3LSK2-1", "url": "https://www.uniprot.org/uniprotkb/I3LSK2/entry#I3LSK2-1", "sequence": { "sequence": "MSAPEDEERLLPLAQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGHGAREAAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKGEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGVRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLVQAVQGEGFMSLYKGFLPSWLRMTPWSLVFWLTYEKIREMSGVSPF", "length": 323, "header": "tr|I3LSK2-1|I3LSK2_PIG Isoform 1 of Mitochondrial uncoupling protein 4 OS=Sus scrofa OX=9823 GN=SLC25A27 PE=1 SV=2 CANONICAL=I3LSK2-1" }, "locus": { "chromosome": "7", "start_pos": 41453313, "end_pos": 41426408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031260.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031260.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000027095.2", "url": "https://www.ensembl.org/id/ENSSSCP00000027095.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 92, "start_aa": "Thr", "end_pos": 92, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr92", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q788", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q788" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-167826", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-167826", "resource": "Reactome", "description": "The fatty acid cycling model" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A9J7KFA5-1", "protein_name": "Mitochondrial uncoupling protein 4", "gene_name": "Slc25a27", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSVPEEEETLLPLTQRWPRTSKFLLSGCAATVAELATFPLDLTKTRLQMQGEAALARLGDGATESAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDKHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEENIATHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFLSLYKGFLPSWLRMEDTLLHRNCNLQGAALSISMKTKFSLTPLFF", "length": 331 }, "evidence": [ { "id": "I3LSK2", "url": "https://omabrowser.org/oma/group/I3LSK2/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "E1BME0-1", "protein_name": "Mitochondrial uncoupling protein 4", "gene_name": "SLC25A27", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MSTPDDAERLSPLAQRWPRACKFLLSGCAATVAELATFPLDLTKTRLQIQGEAALARLGDGATESAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHIVYSGGRMVTYEHLREVVFGKSEDKHYPLWKSVIGGMMAGVVGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIVTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFLSLYKGFLPSWLRMTPWSLVFWLTYEKIREMSGVSPF", "length": 323 }, "evidence": [ { "id": "I3LSK2", "url": "https://omabrowser.org/oma/group/I3LSK2/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "O95847-1", "protein_name": "Mitochondrial uncoupling protein 4", "gene_name": "SLC25A27", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSVPEEEERLLPLTQRWPRASKFLLSGCAATVAELATFPLDLTKTRLQMQGEAALARLGDGARESAPYRGMVRTALGIIEEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDEHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRKLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWVPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNIMTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSTDCLIQAVQGEGFMSLYKGFLPSWLRMTPWSMVFWLTYEKIREMSGVSPF", "length": 323 }, "evidence": [ { "id": "I3LSK2", "url": "https://omabrowser.org/oma/group/I3LSK2/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9D6D0-1", "protein_name": "Mitochondrial uncoupling protein 4", "gene_name": "Slc25a27", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MPIAEEEKLLPLTQRWPRTSKFLLSGCAATVAELATFPLDLTKTRLQMQGEAALARLGDGAVDSAPYRGMVRTALGIVQEEGFLKLWQGVTPAIYRHVVYSGGRMVTYEHLREVVFGKSEDKHYPLWKSVIGGMMAGVIGQFLANPTDLVKVQMQMEGKRRLEGKPLRFRGVHHAFAKILAEGGIRGLWAGWIPNIQRAALVNMGDLTTYDTVKHYLVLNTPLEDNISTHGLSSLCSGLVASILGTPADVIKSRIMNQPRDKQGRGLLYKSSADCLIQAVQGEGFLSLYKGFLPSWLRMTPWSMVFWLTYEKIREMSGVSPF", "length": 322 }, "evidence": [ { "id": "I3LSK2", "url": "https://omabrowser.org/oma/group/I3LSK2/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9VX14-1", "protein_name": "Uncoupling protein 4A, isoform B", "gene_name": "Ucp4A", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MAAKTDESSPAVASSTSSNPAPSSGRHQLRPVKFDYADSFACTYIVSVVAASIAELATYPLDLTKTRLQIQGEGAAHSAGKSNMQYRGMVATAFGIAREEGALKLWQGVTPALYRHVVYSGVRICSYDLMRKEFTQNGTQALPVWKSALCGVTAGAVAQWLASPADLVKVQIQMEGRRRLMGEPPRVHSAGHAFRQIVQRGGIKGLWKGSIPNVQRAALVNLGDLTTYDTIKHLIMNRLQMPDCHTVHVLASVCAGFVAAIMGTPADVVKTRIMNQPTDENGRGLLYRGSVDCLRQTVSKEGFVALYKGFLPCWIRMAPWSLTFWLSFEQIRKMIGASGY", "length": 340 }, "evidence": [ { "id": "I3LSK2", "url": "https://omabrowser.org/oma/group/I3LSK2/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "Q9XI74-1", "protein_name": "Mitochondrial uncoupling protein 3", "gene_name": "PUMP3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MERSRVTREAPTGTRILLASLSAMVAESVTFPIDLTKTRMQLHGSGSASGAHRIGAFGVVSEIARKEGVIGLYKGLSPAIIRHLFYTPIRIIGYENLKGLIVRSETNNSESLPLATKALVGGFSGVIAQVVASPADLVKVRMQADGRLVSQGLKPRYSGPIEAFTKILQSEGVKGLWKGVLPNIQRAFLVNMGELACYDHAKHFVIDKKIAEDNIFAHTLASIMSGLASTSLSCPADVVKTRMMNQGENAVYRNSYDCLVKTVKFEGIRALWKGFFPTWARLGPWQFVFWVSYEKFRLLAGISSF", "length": 305 }, "evidence": [ { "id": "I3LSK2", "url": "https://omabrowser.org/oma/group/I3LSK2/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "mitochondrial inner membrane", "id": "GO:0005743", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005743", "evidence": [ { "database": "UniProtKB", "id": "I3LSK2", "url": "https://www.uniprot.org/uniprotkb/I3LSK2" } ], "pmid": "" }, { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LSK2", "url": "https://www.uniprot.org/uniprotkb/I3LSK2" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "response to cold", "id": "GO:0009409", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0009409", "evidence": [ { "database": "UniProtKB", "id": "I3LSK2", "url": "https://www.uniprot.org/uniprotkb/I3LSK2" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "transmembrane transporter activity", "id": "GO:0022857", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0022857", "evidence": [ { "database": "UniProtKB", "id": "I3LSK2", "url": "https://www.uniprot.org/uniprotkb/I3LSK2" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3LSK2", "url": "https://www.uniprot.org/uniprotkb/I3LSK2" } ], "pmid": "" }, { "name": "proton transmembrane transporter activity", "id": "GO:0015078", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015078", "evidence": [ { "database": "UniProtKB", "id": "I3LSK2", "url": "https://www.uniprot.org/uniprotkb/I3LSK2" } ], "pmid": "" }, { "name": "chloride transmembrane transporter activity", "id": "GO:0015108", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015108", "evidence": [ { "database": "UniProtKB", "id": "I3LSK2", "url": "https://www.uniprot.org/uniprotkb/I3LSK2" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "29823", "name": "", "equation": "chloride(in) = chloride(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "29823", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/29823" } ] }, { "id": "34979", "name": "", "equation": "H(+)(in) = H(+)(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "34979", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/34979" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LSK2-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 323, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LSK2-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LSK2" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 92 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": 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{ "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LRF8-1", "uniprot_ac": "I3LRF8", "uniprot_id": "I3LRF8_PIG", "mass": { "chemical_mass": 41611.0, "monoisotopic_mass": 41611.0 }, "refseq": { "ac": "XP_020926748", "name": "poly(rC)-binding protein 3 isoform X3", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926748" }, "gene_names": [ { "name": "PCBP3", "type": "recommended", "evidence": [ { "id": "I3LRF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ] }, { "name": "PCBP3", "type": "synonym", "evidence": [ { "id": "XP_020926748", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926748" } ] } ], "protein_names": [ { "name": "Poly(rC) binding protein 3", "type": "synonym", "evidence": [ { "id": "I3LRF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LRF8/entry#names_and_taxonomy" } ] }, { "name": "poly(rC)-binding protein 3 isoform X3", "type": "synonym", "evidence": [ { "id": "XP_020926748", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926748" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "PCBP3", "url": "https://www.uniprot.org/uniprotkb/I3LRF8", "locus": { "chromosome": "13", "start_pos": 208259369, "end_pos": 208094877, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023041", "url": "https://www.ensembl.org/id/ENSSSCG00000023041" } ] } } ], "crossref": [ { "id": "I3LRF8", "url": "https://alphafold.ebi.ac.uk/entry/I3LRF8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023041", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023041", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd22516", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22516", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22519", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22519", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd22522", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd22522", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100624867", "url": "https://www.ncbi.nlm.nih.gov/gene/100624867", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004087", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004087", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR004088", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004088", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036612", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036612", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "PTHR10288", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR10288", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00013", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00013", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020926748", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020926748", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZMU5", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMU5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZMU5-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZMU5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBM1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BBM1-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BBM1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7Y5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7Y5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q7Y5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7Y5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R731", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R731", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R731-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R731-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8S3", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8S3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F8S3-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F8S3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRF8-1", "url": "https://www.uniprot.org/uniprotkb/I3LRF8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGEGDTIWAPSVLPHGTFSTLSHQPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGDKLPLHSSEEAPNLMGQPAGLDTSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGAL", "length": 393, "header": "tr|I3LRF8-1|I3LRF8_PIG Isoform 1 of Poly(rC) binding protein 3 OS=Sus scrofa OX=9823 GN=PCBP3 PE=1 SV=4 CANONICAL=I3LRF8-1" }, "isoforms": [ { "isoform_ac": "A0A286ZMU5-1", "url": "https://www.uniprot.org/uniprotkb/I3LRF8/entry#A0A286ZMU5-1", "sequence": { "sequence": "MGEGDTIWAPSVLPHGTFSTLSHQPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDTSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGAL", "length": 351, "header": "tr|A0A286ZMU5-1|A0A286ZMU5_PIG Computationally mapped isoform of Poly(rC) binding protein 3 OS=Sus scrofa OX=9823 GN=PCBP3 PE=1 SV=2 CANONICAL=I3LRF8-1" }, "locus": { "chromosome": "13", "start_pos": 208258782, "end_pos": 208211967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000053396.3", "url": "https://www.ensembl.org/id/ENSSSCT00000053396.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032949.2", "url": "https://www.ensembl.org/id/ENSSSCP00000032949.2" } ] } }, { "isoform_ac": "A0A287BBM1-1", "url": "https://www.uniprot.org/uniprotkb/I3LRF8/entry#A0A287BBM1-1", "sequence": { "sequence": "MGEGDTIWAPSVLPHGTFSTLSHQPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGDKLPLHSSEEAPNLMGQPAGLDTSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGAL", "length": 345, "header": "tr|A0A287BBM1-1|A0A287BBM1_PIG Computationally mapped isoform of Poly(rC) binding protein 3 OS=Sus scrofa OX=9823 GN=PCBP3 PE=1 SV=1 CANONICAL=I3LRF8-1" }, "locus": { "chromosome": "13", "start_pos": 208258782, "end_pos": 208211967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000065713.3", "url": "https://www.ensembl.org/id/ENSSSCT00000065713.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000053741.2", "url": "https://www.ensembl.org/id/ENSSSCP00000053741.2" } ] } }, { "isoform_ac": "A0A5G2Q7Y5-1", "url": "https://www.uniprot.org/uniprotkb/I3LRF8/entry#A0A5G2Q7Y5-1", "sequence": { "sequence": "MRPPFPGDTIWAPSVLPHGTFSTLSHQPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKVGGRARPRKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLQLTKLHQLAMQQTPFPPLGQTNPAFPGTYPAAPPDLSSHPGLFPSLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGAL", "length": 347, "header": "tr|A0A5G2Q7Y5-1|I3LRF8_PIG Computationally mapped isoform of Poly(rC) binding protein 3 OS=Sus scrofa OX=9823 GN=PCBP3 PE=1 SV=1 CANONICAL=I3LRF8-1" }, "locus": { "chromosome": "13", "start_pos": 208258782, "end_pos": 208235268, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080198.2", "url": "https://www.ensembl.org/id/ENSSSCT00000080198.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060254.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060254.1" } ] } }, { "isoform_ac": "A0A5G2R731-1", "url": "https://www.uniprot.org/uniprotkb/I3LRF8/entry#A0A5G2R731-1", "sequence": { "sequence": "MGCDTIWAPSVLPHGTFSTLSHQPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKVGGRARPRKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGDKLPLHSSEEAPNLMGQPAGLDTSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGAL", "length": 344, "header": "tr|A0A5G2R731-1|A0A5G2R731_PIG Computationally mapped isoform of Poly(rC) binding protein 3 OS=Sus scrofa OX=9823 GN=PCBP3 PE=1 SV=2 CANONICAL=I3LRF8-1" }, "locus": { "chromosome": "13", "start_pos": 208258782, "end_pos": 208235160, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077074.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077074.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072885.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072885.2" } ] } }, { "isoform_ac": "A0A8W4F8S3-1", "url": "https://www.uniprot.org/uniprotkb/I3LRF8/entry#A0A8W4F8S3-1", "sequence": { "sequence": "MESKVSEGGLNVTLTIRLLMHGKVGGRARPRKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGDKLPLHSSEEAPNLMGQPAGLDTSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGAL", "length": 361, "header": "tr|A0A8W4F8S3-1|A0A8W4F8S3_PIG Computationally mapped isoform of Poly(rC) binding protein 3 OS=Sus scrofa OX=9823 GN=PCBP3 PE=1 SV=1 CANONICAL=I3LRF8-1" }, "locus": { "chromosome": "13", "start_pos": 208258782, "end_pos": 208235373, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000095140.1", "url": "https://www.ensembl.org/id/ENSSSCT00000095140.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075220.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075220.1" } ] } }, { "isoform_ac": "I3LRF8-1", "url": "https://www.uniprot.org/uniprotkb/I3LRF8/entry#I3LRF8-1", "sequence": { "sequence": "MGEGDTIWAPSVLPHGTFSTLSHQPQLHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGDKLPLHSSEEAPNLMGQPAGLDTSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTSEVTGMGAL", "length": 393, "header": "tr|I3LRF8-1|I3LRF8_PIG Isoform 1 of Poly(rC) binding protein 3 OS=Sus scrofa OX=9823 GN=PCBP3 PE=1 SV=4 CANONICAL=I3LRF8-1" }, "locus": { "chromosome": "13", "start_pos": 208258782, "end_pos": 208211967, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000030310.4", "url": "https://www.ensembl.org/id/ENSSSCT00000030310.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026692.4", "url": "https://www.ensembl.org/id/ENSSSCP00000026692.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q7Y5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q7Y5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 4, "go_terms": [ { "name": "RNA binding", "id": "GO:0003723", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003723", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" }, { "name": "mRNA binding", "id": "GO:0003729", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003729", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" }, { "name": "C-rich single-stranded DNA binding", "id": "GO:1990829", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990829", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" }, { "name": "DNA binding", "id": "GO:0003677", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003677", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" }, { "name": "ribonucleoprotein complex", "id": "GO:1990904", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990904", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "regulation of transcription by RNA polymerase II", "id": "GO:0006357", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006357", "evidence": [ { "database": "UniProtKB", "id": "I3LRF8", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 172, "end_pos": 174, "annotation": "n_glycosylation_sequon" }, { "start_pos": 237, "end_pos": 239, "annotation": "n_glycosylation_sequon" }, { "start_pos": 353, "end_pos": 355, "annotation": "n_glycosylation_sequon" }, { "start_pos": 371, "end_pos": 373, "annotation": "n_glycosylation_sequon" }, { "start_pos": 43, "end_pos": 45, "annotation": "n_glycosylation_sequon" }, { "start_pos": 80, "end_pos": 82, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LRF8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 393, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LRF8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LRF8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LRF8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LRF8" }, { "id": "SM00322", "database": "SMART", "url": "http://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00322" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "K Homology", "eco_id": "ECO_0000259", "start_pos": 44, "end_pos": 112, "start_aa": "Val", "end_aa": "Glu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 172, "end_pos": 174 }, { "start_pos": 237, "end_pos": 239 }, { "start_pos": 353, "end_pos": 355 }, { "start_pos": 371, "end_pos": 373 }, { "start_pos": 43, "end_pos": 45 }, { "start_pos": 80, "end_pos": 82 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LLV8-1", "uniprot_ac": "I3LLV8", "uniprot_id": "I3LLV8_PIG", "mass": { "chemical_mass": 74681.0, "monoisotopic_mass": 74681.0 }, "refseq": { "ac": "XP_003482429", "name": "sec1 family domain-containing protein 2 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482429" }, "gene_names": [ { "name": "SCFD2", "type": "recommended", "evidence": [ { "id": "I3LLV8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLV8" } ] }, { "name": "SCFD2", "type": "synonym", "evidence": [ { "id": "XP_003482429", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482429" } ] } ], "protein_names": [ { "name": "Sec1 family domain containing 2", "type": "synonym", "evidence": [ { "id": "I3LLV8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLV8/entry#names_and_taxonomy" } ] }, { "name": "sec1 family domain-containing protein 2 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_003482429", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482429" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LLV8", "url": "https://www.uniprot.org/uniprotkb/I3LLV8" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SCFD2", "url": "https://www.uniprot.org/uniprotkb/I3LLV8", "locus": { "chromosome": "8", "start_pos": 39715528, "end_pos": 40145887, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000008836", "url": "https://www.ensembl.org/id/ENSSSCG00000008836" } ] } } ], "crossref": [ { "id": "I3LLV8", "url": "https://alphafold.ebi.ac.uk/entry/I3LLV8", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000008836", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000008836", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100738927", "url": "https://www.ncbi.nlm.nih.gov/gene/100738927", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001619", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001619", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027482", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027482", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036045", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036045", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100738927", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738927", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FHEYESL", "url": "https://omabrowser.org/oma/group/FHEYESL/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LLV8", "url": "https://www.orthodb.org/?gene=I3LLV8", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR11679", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11679", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00995", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00995", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_003482429", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003482429", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8C9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8C9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2Q8C9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8C9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCW1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCW1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QCW1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QCW1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYC0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYC0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QYC0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QYC0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RHD7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RHD7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RHD7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RHD7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLV8", "url": "https://www.uniprot.org/uniprotkb/I3LLV8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLV8-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV8-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSIPGVLSFTQQAWEQVLAKVKRAVVYLDAASAESLHWGCGSSRLLEAVGSPACYLREFEPAAVGGGADQPKAVFVLSCLLKGRTVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGNMNYTAEVLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNGARPDKRRLGSLSEVDATALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIAADLANFAPAKNRRKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIISVLPQLPGHTNDVMVNMVELTALQAEEENQNMVAPGCLAQSNDPAAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLTSYIQLFKNNLKALGNHCGLLQLGLATIQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVVLNQLMPMIKPSNQRTSDDYSPGELLVLLVYIYSVSGELSVDKDLGEAEEKVKKALAQVFCEESELSPLLQKITGCDSAINLTLPKSKSAVDELFTSLRDIAGARSLMKQFKSVYVPGNHTHQASYKPLLKQVVEEIFNPERPDPVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDHPLLILFVVGGVTVSEAKMIKDLVPSLKPGTQVIVLSTRLLKPLLIPELLFATDRLHPDLGF", "length": 684, "header": "tr|I3LLV8-1|I3LLV8_PIG Isoform 1 of Sec1 family domain containing 2 OS=Sus scrofa OX=9823 GN=SCFD2 PE=1 SV=3 CANONICAL=I3LLV8-1" }, "isoforms": [ { "isoform_ac": "A0A5G2Q8C9-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV8/entry#A0A5G2Q8C9-1", "sequence": { "sequence": "MSIPGVLSFTQQAWEQVLAKVKRAVVYLDAASAESLHWGCGSSRLLEAVGSPACYLREFEPAAVGGGADQPKAVFVLSCLLKGRTVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGNMNYTAEVLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNGARPDKRRLGSLSEVDATALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIAADLANFAPAKNRRKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIISVLPQLPGHTNDVMVNMVELTALQAEEENQNMVAPGCLAQSNDPAAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLTSYIQLFKNNLKALGNHCGLLQLGLATIQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVVLNQLMPMIKPSNQRTSDDYSPGELLVLLVYIYSVSGELSVDKDLGEAEEKVKKALAQVFCEESELSPLLQKITGCDSAINLTLPKSKSAVDELFTSLRDIAGARSLMKQFKSVYVPGNHTHQVSRPHPSDHPLLILFVVGGVTVSEAKMIKDLVPSLKPGTQVIVLSTRLLKPLLIPELLFATDRLHPDLGF", "length": 639, "header": "tr|A0A5G2Q8C9-1|I3LLV8_PIG Computationally mapped isoform of Sec1 family domain containing 2 OS=Sus scrofa OX=9823 GN=SCFD2 PE=1 SV=1 CANONICAL=I3LLV8-1" }, "locus": { "chromosome": "8", "start_pos": 40145748, "end_pos": 39716565, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000077557.2", "url": "https://www.ensembl.org/id/ENSSSCT00000077557.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060121.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060121.1" } ] } }, { "isoform_ac": "A0A5G2QCW1-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV8/entry#A0A5G2QCW1-1", "sequence": { "sequence": "MSIPGVLSFTQQAWEQVLAKVKRAVVYLDAASAESLHWGCGSSRLLEAVGSPACYLREFEPAAVGGGADQPKAVFVLSCLLKGRTVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGNMNYTAEVLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNGARPDKRRLGSLSEVDATALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIAADLANFAPAKNRRKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIISVLPQLPGHTNDVMVNMVELTALQAEEENQNMVAPGCLAQSNDPAAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLTSYIQLFKNNLKALGNHCGLLQLGLATIQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVVLNQLMPMIKPSNQRTSDDYSPGELLVLLVYIYSVSGELSVDKDLGEAEEKVKKALAQVFCEESELSPLLQKITGECLTKIEGINATDAETGLKIKAFREEGVAVFLMGVVSNFMRPDECQPLFKIRGFYSSLFFVHLWW", "length": 586, "header": "tr|A0A5G2QCW1-1|I3LLV8_PIG Computationally mapped isoform of Sec1 family domain containing 2 OS=Sus scrofa OX=9823 GN=SCFD2 PE=1 SV=1 CANONICAL=I3LLV8-1" }, "locus": { "chromosome": "8", "start_pos": 40145748, "end_pos": 39978277, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072511.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072511.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059874.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059874.1" } ] } }, { "isoform_ac": "A0A5G2QYC0-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV8/entry#A0A5G2QYC0-1", "sequence": { "sequence": "MSIPGVLSFTQQAWEQVLAKVKRAVVYLDAASAESLHWGCGSSRLLEAVGSPACYLREFEPAAVGGGADQPKAVFVLSCLLKGRTVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGNMNYTAEVLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNGARPDKRRLGSLSEVDATALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIAADLANFAPAKNRRKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIISVLPQLPGHTNDVMVNMVELTALQAEEENQNMVAPGCLAQSNDPAAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLTSYIQLFKNNLKALGNHCGLLQLGLATIQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVVLNQLMPMIKPSNQRTSDDYSPGELLVLLVYIYSVSGELSVDKDLGEAEEKVKKALAQVFCEESELSPLLQKITGELVLLLRIVSCGHRGHLHCRQLGERPSKWHTL", "length": 553, "header": "tr|A0A5G2QYC0-1|I3LLV8_PIG Computationally mapped isoform of Sec1 family domain containing 2 OS=Sus scrofa OX=9823 GN=SCFD2 PE=1 SV=1 CANONICAL=I3LLV8-1" }, "locus": { "chromosome": "8", "start_pos": 40145748, "end_pos": 39915262, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000080102.1", "url": "https://www.ensembl.org/id/ENSSSCT00000080102.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069878.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069878.1" } ] } }, { "isoform_ac": "A0A5G2RHD7-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV8/entry#A0A5G2RHD7-1", "sequence": { "sequence": "MSIPGVLSFTQQAWEQVLAKVKRAVVYLDAASAESLHWGCGSSRLLEAVGSPACYLREFEPAAVGGGADQPKAVFVLSCLLKGRTVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGNMNYTAEVLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNGARPDKRRLGSLSEVDATALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIAADLANFAPAKNRRKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIISVLPQLPGHTNDVMVNMVELTALQAEEENQNMVAPGCLAQSNDPAAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLTSYIQLFKNNLKALGNHCGLLQLGLATIQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVVLNQLMPMIKPSNQRTSDDYSPGELLVLLVYIYSVSGELSVDKDLGEAEEKVKKALAQVFCEESELSPLLQKITGEFKNKGVSRRGCSRLSYGRCFELHEAR", "length": 548, "header": "tr|A0A5G2RHD7-1|A0A5G2RHD7_PIG Computationally mapped isoform of Sec1 family domain containing 2 OS=Sus scrofa OX=9823 GN=SCFD2 PE=1 SV=2 CANONICAL=I3LLV8-1" }, "locus": { "chromosome": "8", "start_pos": 40145748, "end_pos": 39978344, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000084289.2", "url": "https://www.ensembl.org/id/ENSSSCT00000084289.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074584.2", "url": "https://www.ensembl.org/id/ENSSSCP00000074584.2" } ] } }, { "isoform_ac": "I3LLV8-1", "url": "https://www.uniprot.org/uniprotkb/I3LLV8/entry#I3LLV8-1", "sequence": { "sequence": "MSIPGVLSFTQQAWEQVLAKVKRAVVYLDAASAESLHWGCGSSRLLEAVGSPACYLREFEPAAVGGGADQPKAVFVLSCLLKGRTVETLRDIICRSHFQYCVVVTAVNHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGNMNYTAEVLHIPLLLAPVAPHLALTPAFASLFPLLPQDVHILNGARPDKRRLGSLSEVDATALTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSRIIAADLANFAPAKNRRKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIISVLPQLPGHTNDVMVNMVELTALQAEEENQNMVAPGCLAQSNDPAAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLTSYIQLFKNNLKALGNHCGLLQLGLATIQTLKHPQTAKWDNFLAFERLLLQSIGESTMSVVLNQLMPMIKPSNQRTSDDYSPGELLVLLVYIYSVSGELSVDKDLGEAEEKVKKALAQVFCEESELSPLLQKITGCDSAINLTLPKSKSAVDELFTSLRDIAGARSLMKQFKSVYVPGNHTHQASYKPLLKQVVEEIFNPERPDPVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDHPLLILFVVGGVTVSEAKMIKDLVPSLKPGTQVIVLSTRLLKPLLIPELLFATDRLHPDLGF", "length": 684, "header": "tr|I3LLV8-1|I3LLV8_PIG Isoform 1 of Sec1 family domain containing 2 OS=Sus scrofa OX=9823 GN=SCFD2 PE=1 SV=3 CANONICAL=I3LLV8-1" }, "locus": { "chromosome": "8", "start_pos": 40145748, "end_pos": 39716565, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023167.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023167.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025078.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025078.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 382, "start_aa": "Thr", "end_pos": 382, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr382", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2Q8C9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2Q8C9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100738927", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100738927", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A1D5NZ00-1", "protein_name": "Sec1 family domain containing 2", "gene_name": "SCFD2", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MAAAGAVPALPRVCRQAWEPVLARARRAVVFLDAAAAEALHWAAGGAGELLAAGALAVRPLQADGGPAGAERAVFVLSGPLRGGAAAAVRAVLGAGEVRRCALLCGEAEGGAPGELEETLRRWMGEDGRAEVLPRGPPLLAPLSAELGLLPALAGLVPPPSCPRPGGPAEAGLGALPVALRDAVRGLVADLDSLFGAMGLREECFAVGALSRVLAAELAGFAPARNRRRAAANRASVVFVDRTLDLAGAVGHHGDSLAEKILSVLPKLPGHKTDVMVNMVELTALQTPDEACSIIAPGCLAQPNSPAAKALWESFMNLKQKEAVMEARRHLVEAASRENLPIKMSMGRVTPEQLSSYVQLFKNNFKALENHCGLLQLVLAAVQTLKHPQISKWDNFLAFERLLLQTIGESEMPSVLNQLLPMIKSYSERMQDDYTCEDFFILLVYMYSVVGEIRNGEELNKAEEEVKKALVKAICDEPELSPLLQKITGCNSALNLTSQKATDAVDNIFKLLRDIARARTHMKQFNSIHNPGSNTNQASYKPLLKQVVEEICSADRPDSVDIEHMSSGLTDLLKTGFSMFMKVNRSHPGDHPLLIIFMVGGVTVSEVKMVKDLVATRKPSTQVIVLSSTLLTPQGAIEQLFAADHPQLDRDI", "length": 652 }, "evidence": [ { "id": "I3LLV8", "url": "https://omabrowser.org/oma/group/I3LLV8/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "F4IP69-1", "protein_name": "Sec1 family domain-containing protein MIP3", "gene_name": "MIP3", "tax_id": 3702, "organism": "Arabidopsis thaliana", "sequence": { "sequence": "MALIDVAISCLNSIREIEEDVKDAIVYIDAGCTESFQFVGAFPLFLELGARAVCSLENMTSLDAVADWNSKSDCAKRIVIMTSRLLNDAHRYMLRCLSTHEGVQRCTVFTSISEGSHSAIPDSPLGPDAYREYETLLVQDYNEHTKKSDKISKDKGVSKFSSALESLTMEPIESENVDISSGGAQGLVVSVHHFPLIICPFTPRAFVLPSQGSVAEASLSRQHEDSLSFGLPPISTGSMSDTDDVPPGATLTAHFLYQLALKMELKLEIFSLGDQSKNVGKILTDMSSVYDVARRKRSAGLLLVDRTLDLITPCCHGDSLFDRIFSSLPRAERFSSQAQLKQGVPSINRPSLDVQVPLGELLNEEPSKIRDSGLPEGIEAFLRGWDSYTSAPQNVGLFNECDKKSTTNWTELLNGSLVATECFRGTPYLEAMIDRKTKDGSVLVKKWLQEALRRENISVNVRARPGYATKPELQAMIKALSQSQSSLLKNKGIIQLGAATAAALDESQSAKWDTFSSAEMMLNVSAGDTSQGLAAQISDLINKSAVAELQAKKNEKPDSSSRGLLSFRDALLLTIVGYILAGENFPTSGSGGPFSWQEEHFLKEAIVDAVLENPSAGNLKFLNGLTEELEGRLNRLKSEETKEIPSDDQLDIDALDDDPWGKWGDEEEEEVDNSKADESYDDMQLKLDLRDRVDSLFRFLHKLSSLRTRNLPLREGSLASESSFPGEPSGNKGLVYRLITKVLSKQEIPGLEYHSSTVGRFIKSGFGRFGLGQAKPSLADQSVILVFVIGGINGIEVLEAQEAVSESGRPDINLVIGGTTLLTPDDMFELLLGQFSHF", "length": 838 }, "evidence": [ { "id": "I3LLV8", "url": "https://omabrowser.org/oma/group/I3LLV8/", "database": "OMA" } ], "glygen_name": "Arabidopsis", "common_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q54ZW8-1", "protein_name": "Sec1-like family protein", "gene_name": "scfd2", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MDNNNSNNIKLKNNFEKRFQEIENELRDSHIGLDENFYTSINDNIGISKLIRLSKSIYIAKDDDNDENIDKEKETQQHQIFTTQEYENGIEIHDINNRLVFFCSDYLWNCENHIKSLLKIYSINNCIIYCGLSELAHISHPNSSKSKSKSINNLPNFQNFKNKFIEKMKLSFKKENQDINHDGHDDDDDDEYYQDELPDISCTIKYFPLCYSQPFKNFFTIPIQKSLFPSNYFINDLKLNEYKLNKMPEEIQDNVHKSIYSFLSFLNEMKLGSVSGEDLNIYPIGPFSSYLAHEIQTTLATITNQQQDDYHPISLLLIDRTLDLVGPSLHSENSMDRIYFSTTTPLNKSNNNNNNNNNNNNNNNNDQLNNYQPIINIETFFDNDNKIVSESSINECPRIISTINGSDIERHQNLDNTNNNNTSGESSVRLWDSLITKSLKDVIMILKRRLVEIISKENINVDISSIAGPTNIQSLIALVNVLKDGDNNGDYDDSDDNDDDGNDDGDDNGDNHNHMLMYRYNDIIEAVAAVEQTINLSSQFHWDQLLSIEKILLLSSGYELEEEDEDDEDDEDEENEDNSEPSILSQICDIIETPISGGGGDDKYYSIQEILILCVMAYSIKGLTSKLSQKHLNSLSSLNISNSVSNNNSSNSNLSGSGSVNDNNSVSTLEKIPIFSDSDEQRLINCLSDKILKENIYKDLKFLNRESNNNNNNNDNEEKEEEEEEEEEEEDDENIIDKNELNEILKKKVLSKLKSIGIIRQKYLNEHKSLISGGGSSMMGATYSSLLSQLVKSLFENSVSTGGKDIKDFEKFNSSSLVGYLLGKTNWMGRSKKREKPLDNRKVLIYVLGGITFTELKELTDLFEKTLKSSQYKEFSNHQFLIGSNQILTPLKLFNHLFINENKK", "length": 904 }, "evidence": [ { "id": "I3LLV8", "url": "https://omabrowser.org/oma/group/I3LLV8/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q8BTY8-1", "protein_name": "Sec1 family domain-containing protein 2", "gene_name": "Scfd2", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSAAGILAFAQQGWEQVLAKVKWSVVYLDAACAESLHWSCGSSRLLEAVKGPACHLREFEPQAIGGGAKQPRAVFVLSSPLKGRIVDTLQSIICRSHFQHCVVVTAVSHAVHLTANHVPAAAAAELEGQQPVFEQLEEKLCEWMGNENYTAEVLHVPLFLAPVASHLAFTPAFATLFPLLPQDVHALNSARPDKRRLSSLGEVDATALTPELLLYIRCLVSGLSSLCEHLGVREECFAVGPLSRVIATDLANYAPAKNRKKTATGRASVVFVDRTLDLTGAVGHHGDNLVEKIMSVLPQLPGHTHDVMVNMAELTAVQAVEENQNVIAPGCLAPSNEASAKALWEALLNSKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLMSYIQLFKNNLRALRNHCGLLQLGMATVQTLKHPQTAKWDNFLAFERLLLQSLGDSTMAGVLNQLLPMIKSSSQRTSDDLNPEELLILLIYIYSVPGDVTLDRDLGDVEEKVKKALAHVLSEESELSPLLQKITGCDSAVDLTLPKSQIAVNDVFMALREIAGARNLMRQFKSVYVPGNNTHQASYKPLLKQVVEEIFNPEKSDPIDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDHPLLILFVVGGVTVAEAKMVKDLVASLKPGTQVMVLSTRLLKPLNIPELLFATDRLHPDLGF", "length": 684 }, "evidence": [ { "id": "I3LLV8", "url": "https://omabrowser.org/oma/group/I3LLV8/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8WU76-1", "protein_name": "Sec1 family domain-containing protein 2", "gene_name": "SCFD2", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSASGVLSFTQQGWEQVLAKVKRAVVYLDAACAESLHWGCGSTRLLEAVGGPDCHLREFEPDAIGGGAKQPKAVFVLSCLLKGRTVEILRDIICRSHFQYCVVVTTVSHAVHLTANHVPAAAAAEMEGQQPVFEQLEEKLCEWMGNMNYTAEVFHVPLLLAPVAPHFALTPAFASLFPLLPQDVHLLNSARPDKRKLGSLGDVDSTTLTPELLLQIRCLVSGLSSLCEHLGVREECFAVGSLSQVIAADLANYAPAKNRKKTAAGRASVVFVDRTLDLTGAVGHHGDNLVEKIISALPQLPGHTNDVMVNMIALTALHTEEENYNVVAPGCLSQSSDTTAKALWEALLNTKHKEAVMEVRRHLVEAASRENLPIKMSMGRVTPGQLMSYIQLFKNNLKALMNHCGLLQLGLATAQTLKHPQTAKWDNFLAFERLLLQSIGESAMSVVLNQLLPMIKPVTQRTNEDYSPEELLILLIYIYSVTGELTVDKDLCEAEEKVKKALAQVFCEESGLSPLLQKITDWDSSINLTFHKSKIAVDELFTSLRDIAGARSLLKQFKSVYVPGNHTHQASYKPLLKQVVEEIFHPERPDSVDIEHMSSGLTDLLKTGFSMFMKVSRPHPSDYPLLILFVVGGVTVSEVKMVKDLVASLKPGTQVIVLSTRLLKPLNIPELLFATDRLHPDLGF", "length": 684 }, "evidence": [ { "id": "I3LLV8", "url": "https://omabrowser.org/oma/group/I3LLV8/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "protein transport", "id": "GO:0015031", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015031", "evidence": [ { "database": "UniProtKB", "id": "I3LLV8", "url": "https://www.uniprot.org/uniprotkb/I3LLV8" } ], "pmid": "" }, { "name": "vesicle-mediated transport", "id": "GO:0016192", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016192", "evidence": [ { "database": "UniProtKB", "id": "I3LLV8", "url": "https://www.uniprot.org/uniprotkb/I3LLV8" } ], "pmid": "" }, { "name": "intracellular protein transport", "id": "GO:0006886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0006886", "evidence": [ { "database": "UniProtKB", "id": "I3LLV8", "url": "https://www.uniprot.org/uniprotkb/I3LLV8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 148, "end_pos": 150, "annotation": "n_glycosylation_sequon" }, { "start_pos": 527, "end_pos": 529, "annotation": "n_glycosylation_sequon" }, { "start_pos": 565, "end_pos": 567, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LLV8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 684, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LLV8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LLV8" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 382 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 148, "end_pos": 150 }, { "start_pos": 527, "end_pos": 529 }, { "start_pos": 565, "end_pos": 567 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LLQ4-1", "uniprot_ac": "I3LLQ4", "uniprot_id": "I3LLQ4_PIG", "mass": { "chemical_mass": 72152.0, "monoisotopic_mass": 72152.0 }, "refseq": {}, "gene_names": [ { "name": "BMPER", "type": "recommended", "evidence": [ { "id": "I3LLQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ] } ], "protein_names": [ { "name": "BMP binding endothelial regulator", "type": "synonym", "evidence": [ { "id": "I3LLQ4", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#names_and_taxonomy" } ] } ], "function": [ { "annotation": "Inhibitor of bone morphogenetic protein (BMP) function, it may regulate BMP responsiveness of osteoblasts and chondrocytes.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2RCX0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCX0#function" }, { "database": "UniProtKB", "id": "ARBA00058234", "url": "https://www.uniprot.org/uniprotkb/ARBA00058234#function" }, { "database": "UniProtKB", "id": "A0A5G2R299", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R299#function" }, { "database": "UniProtKB", "id": "A0A5G2RF33", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF33#function" }, { "database": "UniProtKB", "id": "I3LAF3", "url": "https://www.uniprot.org/uniprotkb/I3LAF3#function" }, { "database": "UniProtKB", "id": "A0A5G2R528", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R528#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "BMPER", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4", "locus": { "chromosome": "18", "start_pos": 39412838, "end_pos": 39663592, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000016665", "url": "https://www.ensembl.org/id/ENSSSCG00000016665" } ] } } ], "crossref": [ { "id": "I3LLQ4", "url": "https://alphafold.ebi.ac.uk/entry/I3LLQ4", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000016665", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000016665", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd19941", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd19941", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100525197", "url": "https://www.ncbi.nlm.nih.gov/gene/100525197", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001007", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001007", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR001846", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001846", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR002919", "url": "https://www.ebi.ac.uk/interpro/entry/IPR002919", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR014853", "url": "https://www.ebi.ac.uk/interpro/entry/IPR014853", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036084", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036084", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052424", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052424", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100525197", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525197", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LAF3", "url": "https://www.orthodb.org/?gene=I3LAF3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR46698", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46698", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR46698:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR46698:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00093", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00093", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00094", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00094", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF01826", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01826", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF08742", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF08742", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QA53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA53", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QA53-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA53-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R299", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R299", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R299-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R299-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R528", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R528", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R528-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R528-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9S1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9S1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9S1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9S1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCX0", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCX0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCX0-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCX0-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RF33", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF33", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RF33-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RF33-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAF3", "url": "https://www.uniprot.org/uniprotkb/I3LAF3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LAF3-1", "url": "https://www.uniprot.org/uniprotkb/I3LAF3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLQ4-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MLWFSGVRALAERPCRRSPGITCCVLLLLNCSGVPMSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRGKILNRKGCCPICTEKPGVCTVFGDPHYNTFDGRTFNFQGTCQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQR", "length": 650, "header": "tr|I3LLQ4-1|I3LLQ4_PIG Isoform 1 of BMP binding endothelial regulator OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=3 CANONICAL=I3LLQ4-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QA53-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#A0A5G2QA53-1", "sequence": { "sequence": "MCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRDGEMWSSINCTICACVKGQTECRKKQCVPISSCPQGKILNRKGCCPICTEKPGVCTVFGDPHYNTFDGRTFNFQGTCQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRHSV", "length": 517, "header": "tr|A0A5G2QA53-1|I3LLQ4_PIG Computationally mapped isoform of BMP binding endothelial regulator OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=1 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39662195, "end_pos": 39419222, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075551.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075551.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060865.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060865.1" } ] } }, { "isoform_ac": "A0A5G2R299-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#A0A5G2R299-1", "sequence": { "sequence": "MSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRDGEMWSSINCTICACVKGQTECRKKQCVPISSCPQGKILNRKGCCPICTEKPGVCTVFGDPHYNTFDGRTFNFQGTCQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQR", "length": 650, "header": "tr|A0A5G2R299-1|I3LLQ4_PIG Computationally mapped isoform of BMP binding endothelial regulator OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=2 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39663485, "end_pos": 39419053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066728.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066728.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064658.2", "url": "https://www.ensembl.org/id/ENSSSCP00000064658.2" } ] } }, { "isoform_ac": "A0A5G2R528-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#A0A5G2R528-1", "sequence": { "sequence": "MLWFSGVRALAERPCRRSPGITCCVLLLLNCSGVPMSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRDGEMWSSINCTICACVKGQTECRKKQCVPISSCPQGKILNRKGCCPICTEKPGVCTVFGDPHYNTFDGRTFNFQGTCQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQRICIFFAIRHVLFLV", "length": 699, "header": "tr|A0A5G2R528-1|A0A5G2R528_PIG Computationally mapped isoform of BMP-binding endothelial regulator protein OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=1 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39663457, "end_pos": 39418821, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086931.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086931.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069280.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069280.1" } ] } }, { "isoform_ac": "A0A5G2R9S1-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#A0A5G2R9S1-1", "sequence": { "sequence": "MLWFSGVRALAERPCRRSPGITCCVLLLLNCSGVPMSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQR", "length": 592, "header": "tr|A0A5G2R9S1-1|A0A5G2R9S1_PIG Computationally mapped isoform of BMP binding endothelial regulator OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=1 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39663457, "end_pos": 39419053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000070981.1", "url": "https://www.ensembl.org/id/ENSSSCT00000070981.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074049.1", "url": "https://www.ensembl.org/id/ENSSSCP00000074049.1" } ] } }, { "isoform_ac": "A0A5G2RCX0-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#A0A5G2RCX0-1", "sequence": { "sequence": "MLWFSGVRALAERPCRRSPGITCCVLLLLNCSGVPMSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRDGEMWSSINCTICACVKGQTECRKKQCVPISSCPQGKILNRKGCCPICTESLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQR", "length": 575, "header": "tr|A0A5G2RCX0-1|A0A5G2RCX0_PIG Computationally mapped isoform of BMP-binding endothelial regulator protein OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=1 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39663457, "end_pos": 39419053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075758.1", "url": "https://www.ensembl.org/id/ENSSSCT00000075758.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068529.1", "url": "https://www.ensembl.org/id/ENSSSCP00000068529.1" } ] } }, { "isoform_ac": "A0A5G2RF33-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#A0A5G2RF33-1", "sequence": { "sequence": "MLWFSGVRALAERPCRRSPGITCCVLLLLNCSGVPMSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRDGEMWSSINCTICACVKGQTECRKKQCVPISSCPQVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQR", "length": 627, "header": "tr|A0A5G2RF33-1|A0A5G2RF33_PIG Computationally mapped isoform of BMP-binding endothelial regulator protein OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=1 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39663457, "end_pos": 39419053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087619.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087619.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069562.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069562.1" } ] } }, { "isoform_ac": "I3LAF3-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#I3LAF3-1", "sequence": { "sequence": "MLWFSGVRALAERPCRRSPGITCCVLLLLNCSGVPMSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRDGEMWSSINCTICACVKGQTECRKKQCVPISSCPQGKILNRKGCCPICTEKPGVCTVFGDPHYNTFDGRTFNFQGTCQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQR", "length": 685, "header": "tr|I3LAF3-1|I3LAF3_PIG Computationally mapped isoform of BMP-binding endothelial regulator protein OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=2 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39663457, "end_pos": 39419053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023205.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023205.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000021021.2", "url": "https://www.ensembl.org/id/ENSSSCP00000021021.2" } ] } }, { "isoform_ac": "I3LLQ4-1", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4/entry#I3LLQ4-1", "sequence": { "sequence": "MLWFSGVRALAERPCRRSPGITCCVLLLLNCSGVPMSLASSFLTGSVAKCENEGEVLQIPFITDNPCIMCVCMNKEVTCKREKCPVLSRDCALAIKQRGACCERCKGCTYAGNTYNSSFKWQSPTEPCILRQCQEGVVTESAVRCVVHCKNPSKHLGTCCPTCPGCVFEGVQYREGEEFQPEGDKCTKCSCVEGRTQCLREVCPILSCPQHLSHIPPGQCCPRCLGQRKVFDLPFGSCLFRSDVYDNGSSFLYDNCTACTCRDSTVVCKKKCSQPGGCDRGEGACCEECLLRVPSEDIKMCKFGNKIFRGKILNRKGCCPICTEKPGVCTVFGDPHYNTFDGRTFNFQGTCQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVDLVLGTSTVSLQQHLTVRWNGSRIALPCQAPQFHIDLDGYLLKVTTKAGLEISWDGDSFVEVMAAPHLKGKLCGLCGNYNGHKRDDLIGGDGNFKFDVDDFAESWRVESNEFCNRPQRKPVPELCQGTVRVKLRAHRECQKLKSWEFQTCHSTVDYATFYRSCVTDMCECPVHKNCYCESFLAYTRACQREGISVHWEPQQTCAATQCKHGAVYDTCGPGCVKTCDNWNEIGPCNKPCVAGCHCPANLVLHKGRCIKPVLCPQR", "length": 650, "header": "tr|I3LLQ4-1|I3LLQ4_PIG Isoform 1 of BMP binding endothelial regulator OS=Sus scrofa OX=9823 GN=BMPER PE=4 SV=3 CANONICAL=I3LLQ4-1" }, "locus": { "chromosome": "18", "start_pos": 39663457, "end_pos": 39419053, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000029081.3", "url": "https://www.ensembl.org/id/ENSSSCT00000029081.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025024.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025024.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QA53", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QA53" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100525197", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100525197", "resource": "KEGG Pathway" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "extracellular space", "id": "GO:0005615", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005615", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 15, "go_terms": [ { "name": "system development", "id": "GO:0048731", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0048731", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "tube development", "id": "GO:0035295", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035295", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "regulation of transmembrane receptor protein serine/threonine kinase signaling pathway", "id": "GO:0090092", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0090092", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "blood vessel development", "id": "GO:0001568", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001568", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "regulation of angiogenesis", "id": "GO:0045765", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0045765", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "positive regulation of sprouting angiogenesis", "id": "GO:1903672", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1903672", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "positive regulation of ERK1 and ERK2 cascade", "id": "GO:0070374", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0070374", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "regulation of protein localization", "id": "GO:0032880", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032880", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "BMP signaling pathway", "id": "GO:0030509", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030509", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "SMAD protein signal transduction", "id": "GO:0060395", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060395", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "blood vessel endothelial cell proliferation involved in sprouting angiogenesis", "id": "GO:0002043", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0002043", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "endothelial cell activation", "id": "GO:0042118", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042118", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "ureteric bud development", "id": "GO:0001657", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0001657", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "positive regulation of SMAD protein signal transduction", "id": "GO:0060391", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0060391", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" }, { "name": "regulation of endothelial cell migration", "id": "GO:0010594", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010594", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "extracellular matrix structural constituent", "id": "GO:0005201", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005201", "evidence": [ { "database": "UniProtKB", "id": "I3LLQ4", "url": "https://www.uniprot.org/uniprotkb/I3LLQ4" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 116, "end_pos": 118, "annotation": "n_glycosylation_sequon" }, { "start_pos": 247, "end_pos": 249, "annotation": "n_glycosylation_sequon" }, { "start_pos": 255, "end_pos": 257, "annotation": "n_glycosylation_sequon" }, { "start_pos": 30, "end_pos": 32, "annotation": "n_glycosylation_sequon" }, { "start_pos": 406, "end_pos": 408, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": 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"evidence": [ { "id": "I3LGT3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGT3" } ] } ], "protein_names": [ { "name": "Ladinin 1", "type": "synonym", "evidence": [ { "id": "I3LGT3", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LGT3/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LGT3", "url": "https://www.uniprot.org/uniprotkb/I3LGT3" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LAD1", "url": "https://www.uniprot.org/uniprotkb/I3LGT3", "locus": {} } ], "crossref": [ { "id": "I3LGT3", "url": "https://alphafold.ebi.ac.uk/entry/I3LGT3", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000021624", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000021624", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100622691", "url": "https://www.ncbi.nlm.nih.gov/gene/100622691", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR017404", "url": "https://www.ebi.ac.uk/interpro/entry/IPR017404", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100622691", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622691", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "AQASQKW", "url": "https://omabrowser.org/oma/group/AQASQKW/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2RCT3", "url": "https://www.orthodb.org/?gene=A0A5G2RCT3", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12392", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12392", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12392:SF0", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12392:SF0", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "A0A287BSQ4", "url": "https://www.uniprot.org/uniprotkb/A0A287BSQ4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BSQ4-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BSQ4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAM9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAM9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAM9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAM9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCT3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCT3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RCT3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RCT3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGT3", "url": "https://www.uniprot.org/uniprotkb/I3LGT3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LGT3-1", "url": "https://www.uniprot.org/uniprotkb/I3LGT3-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSLPLPTPREWAPHPSPTRRGPHIPYWGPRRSPAQCPPPVGGTLAMWEPVLIVLAVGAGALLCRTDHPLPSPSSLARQWTLEDEEEQERERRRRHRNLSSTTDDEAAPPALDADPPAPERLPSVEEAEIPQQPPPPDSKDENEDVRTVVRTRQERRQRQRLVEAAQAPVREQLEAEQGDSEGAGQAGQRPLVPRKEVELPPHRTLSRERWGSGAREEESAGKEPSGGRKWGSEKPAAPGKTCPERSPDSEEVSVSERSPGPEKVSVLEKIAVLEKRTVSGKRSLSEKASISEKLPAPGKTRGSEKRLVSEKAEVFEKPMASGPEPAPTRAAASGQAQEQPASGKSPSITQGQRRARPEEQPASPASEPRAVAGRLPPITLQVKIPSREDEVDTSSPTGATYSSSLRRSSPRTISFRMSPKRDISEAALTRSASMRLPASSVSLGQKLERYHTAIQRSESVKYPGSTRTEFLVAPVDVARKRHLFEKELAGQGREEPTSSRKEDLKLSGVVTSRLNLWISRTQESGDRDPQEVQKESAAARRTQWRKKTDPSLDAQVRGGGAALGRCPRTPLHPTWPAFAQPCSQAGLPQPPEHWPHLLLAAPPGCVSAPPAFSQIWGRQLPSCSAQEPLLFSQPSSPQV", "length": 639, "header": "tr|I3LGT3-1|I3LGT3_PIG Isoform 1 of Ladinin 1 OS=Sus scrofa OX=9823 GN=LAD1 PE=1 SV=4 CANONICAL=I3LGT3-1" }, "isoforms": [ { "isoform_ac": "A0A287BSQ4-1", "url": "https://www.uniprot.org/uniprotkb/I3LGT3/entry#A0A287BSQ4-1", "sequence": { "sequence": "MSGSRKSWATLSSLARQWTLEDEEEQERERRRRHRNLSSTTDDEAAPPALDADPPAPERLPSVEEAEIPQQPPPPDSKDENEDVRTVVRTRQERRQRQRLVEAAQAPVREQLEAEQGDSEGAGQAGQRPLVPRKEVELPPHRTLSRERWGSGAREEESAGKEPSGGRKWGSEKPAAPGKTCPERSPDSEEVSVSERSPGPEKVSVLEKIAVLEKRTVSGKRSLSEKASISEKLPAPGKTRGSEKRLVSEKAEVFEKPMASGPEPAPTRAAASGQAQEQPASGKSPSITQGQRRARPEEQPASPASEPRAVAGRLPPITLQVKIPSREDEVDTSSPTGATYSSSLRRSSPRTISFRMSPKRDISEAALTRSASMRLPASSVSLGQKLERYHTAIQRSESVKYPGSTRTEFLVAPVDVARKRHLFEKELAGQGREEPTSSRKEDLKLSGVVTSRLNLWISRTQESGDRDPQEVQKESAAARRTQWRKKTDPSLDAQVRGGGAALGRCPRTPLHPTWPAFAQPCSQAGLPQPPEHWPHLLLAAPPGCVSAPPAFSQIWGRQLPSCSAQEPLLFSQPSSPQV", "length": 578, "header": "tr|A0A287BSQ4-1|A0A287BSQ4_PIG Computationally mapped isoform of Ladinin 1 OS=Sus scrofa OX=9823 GN=LAD1 PE=1 SV=2 CANONICAL=I3LGT3-1" }, "locus": { "chromosome": "10", "start_pos": 23778632, "end_pos": 23767731, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044396.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044396.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059166.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059166.2" } ] } }, { "isoform_ac": "A0A5G2QAM9-1", "url": "https://www.uniprot.org/uniprotkb/I3LGT3/entry#A0A5G2QAM9-1", "sequence": { "sequence": "NIGLRSSWGVREGDAGFASRQWTLEDEEEQERERRRRHRNLSSTTDDEAAPPALDADPPAPERLPSVEEAEIPQQPPPPDSKDENEDVRTVVRTRQERRQRQRLVEAAQAPVREQLEAEQGDSEGAGQAGQRPLVPRKEVELPPHRTLSRERWGSGAREEESAGKEPSGGRKWGSEKPAAPGKTCPERSPDSEEVSVSERSPGPEKVSVLEKIAVLEKRTVSGKRSLSEKASISEKLPAPGKTRGSEKRLVSEKAEVFEKPMASGPEPAPTRAAASGQAQEQPASGKSPSITQGQRRARPEEQPASPASEPRAVAGRLPPITLQVKIPSREDEVDTSSPTGATYSSSLRRSSPRTISFRGVSPDVSCPVSLPRSASMRLPASSVSLGQKLERYHTAIQRSESVKYPGSTRTEFLVAPVDVARKRHLFEKELAGQGREEPTSSRKEDLKLSGVVTSRLNLWISRTQESGDRDPQEVQKESAAARRTQWRKKTDPSLDAQVRGGGAALGRCPRTPLHPTWPAFAQPCSQAGLPQPPEHWPHLLLAAPPGCVSAPPAFSQIWGRQLPSCSAQEPLLFSQPSSPQV", "length": 582, "header": "tr|A0A5G2QAM9-1|I3LGT3_PIG Computationally mapped isoform of Ladinin 1 OS=Sus scrofa OX=9823 GN=LAD1 PE=1 SV=1 CANONICAL=I3LGT3-1" }, "locus": { "chromosome": "10", "start_pos": 23772741, "end_pos": 23767731, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076655.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076655.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061457.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061457.1" } ] } }, { "isoform_ac": "A0A5G2RCT3-1", "url": "https://www.uniprot.org/uniprotkb/I3LGT3/entry#A0A5G2RCT3-1", "sequence": { "sequence": "MSGSRKSWATLSSLARQWTLEDEEEQERERRRRHRNLSSTTDDEAAPPALDADPPAPERLPSVEEAEIPQQPPPPDSKDENEDVRTVVRTRQERRQRQRLVEAAQAPVREQLEAEQGDSEGAGQAGQRPLVPRKEVELPPHRTLSRERWGSGAREEESAGKEPSGGRKWGSEKPAAPGKTCPERSPDSEEVSVSERSPGPEKVSVLEKIAVLEKRTVSGKRSLSEKASISEKLPAPGKTRGSEKRLVSEKAEVFEKPMASGPEPAPTRAAASGQAQEQPASGKSPSITQGQRRARPEEQPASPASEPRAVAGRLPPITLQVKIPSREDEVDTSSPTGATYSSSLRRSSPRTISFRMSPKRDISEAALTRSASMRLPASSVSLGQKLERYHTAIQRSESVKYPGSTRTEFLVAPVDVARKRHLFEKELAGQGREEPTSSRKEDLKLSGVVTSRLNLWISRTQESGDRDPQEVQKESAAARRTQWRKKTDPSLDAQV", "length": 495, "header": "tr|A0A5G2RCT3-1|A0A5G2RCT3_PIG Computationally mapped isoform of Ladinin 1 OS=Sus scrofa OX=9823 GN=LAD1 PE=1 SV=2 CANONICAL=I3LGT3-1" }, "locus": { "chromosome": "10", "start_pos": 23778632, "end_pos": 23767731, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000075951.2", "url": "https://www.ensembl.org/id/ENSSSCT00000075951.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000068474.2", "url": "https://www.ensembl.org/id/ENSSSCP00000068474.2" } ] } }, { "isoform_ac": "I3LGT3-1", "url": "https://www.uniprot.org/uniprotkb/I3LGT3/entry#I3LGT3-1", "sequence": { "sequence": "MSLPLPTPREWAPHPSPTRRGPHIPYWGPRRSPAQCPPPVGGTLAMWEPVLIVLAVGAGALLCRTDHPLPSPSSLARQWTLEDEEEQERERRRRHRNLSSTTDDEAAPPALDADPPAPERLPSVEEAEIPQQPPPPDSKDENEDVRTVVRTRQERRQRQRLVEAAQAPVREQLEAEQGDSEGAGQAGQRPLVPRKEVELPPHRTLSRERWGSGAREEESAGKEPSGGRKWGSEKPAAPGKTCPERSPDSEEVSVSERSPGPEKVSVLEKIAVLEKRTVSGKRSLSEKASISEKLPAPGKTRGSEKRLVSEKAEVFEKPMASGPEPAPTRAAASGQAQEQPASGKSPSITQGQRRARPEEQPASPASEPRAVAGRLPPITLQVKIPSREDEVDTSSPTGATYSSSLRRSSPRTISFRMSPKRDISEAALTRSASMRLPASSVSLGQKLERYHTAIQRSESVKYPGSTRTEFLVAPVDVARKRHLFEKELAGQGREEPTSSRKEDLKLSGVVTSRLNLWISRTQESGDRDPQEVQKESAAARRTQWRKKTDPSLDAQVRGGGAALGRCPRTPLHPTWPAFAQPCSQAGLPQPPEHWPHLLLAAPPGCVSAPPAFSQIWGRQLPSCSAQEPLLFSQPSSPQV", "length": 639, "header": "tr|I3LGT3-1|I3LGT3_PIG Isoform 1 of Ladinin 1 OS=Sus scrofa OX=9823 GN=LAD1 PE=1 SV=4 CANONICAL=I3LGT3-1" }, "locus": { "chromosome": "10", "start_pos": 23772532, "end_pos": 23767731, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028940.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028940.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023277.4", "url": "https://www.ensembl.org/id/ENSSSCP00000023277.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAM9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAM9" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100622691", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100622691", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "O00515-1", "protein_name": "Ladinin-1", "gene_name": "LAD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAVSRKDWSALSSLARQRTLEDEEEQERERRRRHRNLSSTTDDEAPRLSQNGDRQASASERLPSVEEAEVPKPLPPASKDEDEDIQSILRTRQERRQRRQVVEAAQAPIQERLEAEEGRNSLSPVQATQKPLVSKKELEIPPRRRLSREQRGPWALEEESLVGREPEERKKGVPEKSPVLEKSSMPKKTAPEKSLVSDKTSISEKVLASEKTSLSEKIAVSEKRNSSEKKSVLEKTSVSEKSLAPGMALGSGRRLVSEKASIFEKALASEKSPTADAKPAPKRATASEQPLAQEPPASGGSPATTKEQRGRALPGKNLPSLAKQGASDPPTVASRLPPVTLQVKIPSKEEEADMSSPTQRTYSSSLKRSSPRTISFRMKPKKENSETTLTRSASMKLPDNTVKLGEKLERYHTAIRRSESVKSRGLPCTELFVAPVGVASKRHLFEKELAGQSRAEPASSRKENLRLSGVVTSRLNLWISRTQESGDQDPQEAQKASSATERTQWGQKSDSSLDAEV", "length": 517 }, "evidence": [ { "id": "I3LGT3", "url": "https://omabrowser.org/oma/group/I3LGT3/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P57016-1", "protein_name": "Ladinin-1", "gene_name": "Lad1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSVSRKDWSALSSLARQRTLEDEEEQERERRRRHRNLSSTTDDESPKLTQNGAQRSVERLPSVEEAEVSKPSPPASKDEDEDFQAILRTRKERRQRRQVVEAVQAPVQERPEAEEERDSLGPEQTSSQPLVPKKKVEALPRRRLSREQRGPWAQDEERLKNRELAEGEKRLPEETVAQQKTLVSEKTPVSEKTPVPAKRLVSEKACPSEKGTATEKASLTEKRHSPEKLVPEKTSVTEKSPVPEKTLVSLKTAAPERRSPPVLEKAIVSEKMQERKLVSEKASIFEKSLVSEAKLTPKKAAVSEQPQTTGGSQATTREPRGRALPDKSPPSSAEQSTPAPPTKASRFPPITLQVKIPSKDEDADTPSPTLLTYSSSLKRSSPRTISFRMSPRKDNSETPLTRSASVRLPASTVKLGEKLERYHTAIQRSESVRSPGSSRTEVLVTPAGVASKRHLFEKELSGQNRTEPTSIRKENLRLSGVVTSRLNLWISKTQDSGDHGSQEVRKEASVTKRAQWGSKPSTSLDAEV", "length": 528 }, "evidence": [ { "id": "I3LGT3", "url": "https://omabrowser.org/oma/group/I3LGT3/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "structural molecule activity", "id": "GO:0005198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005198", "evidence": [ { "database": "UniProtKB", "id": "I3LGT3", "url": "https://www.uniprot.org/uniprotkb/I3LGT3" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 97, "end_pos": 99, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGT3-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 639, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGT3-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGT3" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 97, "end_pos": 99 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LF75-1", "uniprot_ac": "I3LF75", "uniprot_id": "I3LF75_PIG", "mass": { "chemical_mass": 16016.0, "monoisotopic_mass": 16016.0 }, "refseq": { "ac": "XP_020939099", "name": "nuclear receptor 2C2-associated protein", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939099" }, "gene_names": [ { "name": "NR2C2AP", "type": "recommended", "evidence": [ { "id": "I3LF75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF75" } ] }, { "name": "NR2C2AP", "type": "synonym", "evidence": [ { "id": "XP_020939099", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939099" } ] } ], "protein_names": [ { "name": "Nuclear receptor 2C2-associated protein", "type": "recommended", "evidence": [ { "id": "I3LF75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF75/entry#names_and_taxonomy" } ] }, { "name": "TR4 orphan receptor-associated 16 kDa protein", "type": "synonym", "evidence": [ { "id": "I3LF75", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LF75/entry#names_and_taxonomy" } ] }, { "name": "nuclear receptor 2C2-associated protein", "type": "synonym", "evidence": [ { "id": "XP_020939099", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939099" } ] } ], "function": [ { "annotation": "May act as a repressor of NR2C2-mediated transactivation by suppressing the binding between NR2C2/TR4 and the TR4-response element in target genes.", "evidence": [ { "database": "UniProtKB", "id": "I3LF75", "url": "https://www.uniprot.org/uniprotkb/I3LF75#function" }, { "database": "UniProtKB", "id": "ARBA00057172", "url": "https://www.uniprot.org/uniprotkb/ARBA00057172#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LF75", "url": "https://www.uniprot.org/uniprotkb/I3LF75" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "NR2C2AP", "url": "https://www.uniprot.org/uniprotkb/I3LF75", "locus": { "chromosome": "2", "start_pos": 58678130, "end_pos": 58675990, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000023658", "url": "https://www.ensembl.org/id/ENSSSCG00000023658" } ] } } ], "crossref": [ { "id": "I3LF75", "url": "https://alphafold.ebi.ac.uk/entry/I3LF75", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000023658", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000023658", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100620309", "url": "https://www.ncbi.nlm.nih.gov/gene/100620309", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR008979", "url": "https://www.ebi.ac.uk/interpro/entry/IPR008979", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100620309", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620309", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "FFGRITV", "url": "https://omabrowser.org/oma/group/FFGRITV/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LF75", "url": "https://www.orthodb.org/?gene=I3LF75", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "XP_020939099", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020939099", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QAX6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAX6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QAX6-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAX6-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUT4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUT4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QUT4-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QUT4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF75", "url": "https://www.uniprot.org/uniprotkb/I3LF75", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LF75-1", "url": "https://www.uniprot.org/uniprotkb/I3LF75-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MTHSLVCPETVSKVSSVLNRNYRQFGKKHLFDQDEETCWNSDQGPSQWIILEFPQRICVSQLQIQFQGGFSSRQGRLEGSQGSEALAKIVDFYPEDNNSLQTFPVPAAEVDRLKVTFEDTTDFFGRVVIYHLRVLGEKKV", "length": 140, "header": "tr|I3LF75-1|I3LF75_PIG Isoform 1 of Nuclear receptor 2C2-associated protein OS=Sus scrofa OX=9823 GN=NR2C2AP PE=3 SV=2 CANONICAL=I3LF75-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QAX6-1", "url": "https://www.uniprot.org/uniprotkb/I3LF75/entry#A0A5G2QAX6-1", "sequence": { "sequence": "MTHSLVCPETVSKVSSVLNRNYRQFGKKHLFDQDEETCWNSDQGPSQWIILEFPQRICVSQLQIQFQGGFSSRQGRLEGSQGSEALAKIVDFYPEDNNSLQISCLSLRVGWSVPLKAVSW", "length": 120, "header": "tr|A0A5G2QAX6-1|I3LF75_PIG Computationally mapped isoform of Nuclear receptor 2C2-associated protein OS=Sus scrofa OX=9823 GN=NR2C2AP PE=3 SV=1 CANONICAL=I3LF75-1" }, "locus": { "chromosome": "2", "start_pos": 58677180, "end_pos": 58676364, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000078801.1", "url": "https://www.ensembl.org/id/ENSSSCT00000078801.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060569.1", "url": "https://www.ensembl.org/id/ENSSSCP00000060569.1" } ] } }, { "isoform_ac": "A0A5G2QUT4-1", "url": "https://www.uniprot.org/uniprotkb/I3LF75/entry#A0A5G2QUT4-1", "sequence": { "sequence": "MTHSLVCPETVSKVSSVLNRNYRQFGKKHLFDQDEETCWNSDQVPRGVRLLLRLWTFTLRTTTRFRHSLCQLLR", "length": 74, "header": "tr|A0A5G2QUT4-1|I3LF75_PIG Computationally mapped isoform of Nuclear receptor 2C2-associated protein OS=Sus scrofa OX=9823 GN=NR2C2AP PE=3 SV=2 CANONICAL=I3LF75-1" }, "locus": { "chromosome": "2", "start_pos": 58677377, "end_pos": 58676364, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076297.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076297.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061931.2", "url": "https://www.ensembl.org/id/ENSSSCP00000061931.2" } ] } }, { "isoform_ac": "I3LF75-1", "url": "https://www.uniprot.org/uniprotkb/I3LF75/entry#I3LF75-1", "sequence": { "sequence": "MTHSLVCPETVSKVSSVLNRNYRQFGKKHLFDQDEETCWNSDQGPSQWIILEFPQRICVSQLQIQFQGGFSSRQGRLEGSQGSEALAKIVDFYPEDNNSLQTFPVPAAEVDRLKVTFEDTTDFFGRVVIYHLRVLGEKKV", "length": 140, "header": "tr|I3LF75-1|I3LF75_PIG Isoform 1 of Nuclear receptor 2C2-associated protein OS=Sus scrofa OX=9823 GN=NR2C2AP PE=3 SV=2 CANONICAL=I3LF75-1" }, "locus": { "chromosome": "2", "start_pos": 58677469, "end_pos": 58676364, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023414.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023414.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022715.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022715.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QAX6", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QAX6" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100620309", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100620309", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6AI65-1", "protein_name": "Nuclear receptor 2C2-associated protein", "gene_name": "Nr2c2ap", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MTQSLVCPETVSRVSSVLNRNSRQFGKKHLFDQDEETCWNSDQGPCQWVSLEFPQRVQITQLQVQFQGGFSSRHSRLEGSRDGEALSKIVDFYPEDTNALQTFSIPTMEVDRLKLTFEDTTDFFGRVVIYHLRVLGEKAG", "length": 140 }, "evidence": [ { "id": "I3LF75", "url": "https://omabrowser.org/oma/group/I3LF75/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "G3IPI2-1", "protein_name": "Nuclear receptor 2C2-associated protein", "gene_name": "Nr2c2ap", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSQSLVCPETVSRVSSVLNRNSRQFGKKHLFDQDEETCWNSDQGPSQWVTLEFPQRVHVTQLQVQFQGGFSSRHSYLEGSQSGDTLSKIVDFYPEDTNALQTFSIPTVEVDRLKLTFEDTTDFFGRVVIYHLRVLGEKAV", "length": 140 }, "evidence": [ { "id": "I3LF75", "url": "https://omabrowser.org/oma/group/I3LF75/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q3TV70-1", "protein_name": "Nuclear receptor 2C2-associated protein", "gene_name": "Nr2c2ap", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MTQSLVCPDTVSRVSSVLNRNSRQFGKKHLFDQDEETCWNSDQGPSQWVSLEFPQCVQITQLQVQFQGGFSSRHSCLEGSRGGEALSKIVDFYPEDTNALQTFSIPTMEVDRLKLTFEDTTDFFGRVVIYHLRVLGEKAG", "length": 140 }, "evidence": [ { "id": "I3LF75", "url": "https://omabrowser.org/oma/group/I3LF75/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q54VC6-1", "protein_name": "Nuclear receptor 2C2-associated protein", "gene_name": "", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MQSLLVGDYKCRVSSVLNKQTKEYGKENLFDKSEETCWNSHQGTPQFIVIQFPQENGVTLSSVNIMFQGGFVGKDCEILTMSTNSDSKEFIHSCYFYPKDINTTQQFPIDSIKNTNIKQIKILFPQSTDFFGRITIYQLDILGEPTL", "length": 147 }, "evidence": [ { "id": "I3LF75", "url": "https://omabrowser.org/oma/group/I3LF75/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "Q58DU8-1", "protein_name": "Nuclear receptor 2C2-associated protein", "gene_name": "NR2C2AP", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MAHSLVCPETVSRVSSVLNRNTRQFGKKHLFDQDEETCWNSDQGPSQWVTLEFPQCICVSQLQIQFQGGFSSRQGRLEGSLGSEALSKIVDFYPEDNNSLQTFPVPPAEVDRLKVTFEDTTDFFGRVVIYHLRVLGKKKE", "length": 140 }, "evidence": [ { "id": "I3LF75", "url": "https://omabrowser.org/oma/group/I3LF75/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { 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Classification", "Other" ] }, { "id": "R-SSC-6807505", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_013843143", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013843143", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QB34", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB34", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QB34-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB34-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RIV4", "url": "https://www.uniprot.org/uniprotkb/F1RIV4", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RIV4-1", "url": "https://www.uniprot.org/uniprotkb/F1RIV4-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRU6", "url": "https://www.uniprot.org/uniprotkb/I3LRU6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LRU6-1", "url": "https://www.uniprot.org/uniprotkb/I3LRU6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MNRAKPTTVRRPSAAAKPSGHPPPGDFIALGSKGQASESKTASTLLKPAPSGLPSERKRDAAAALAGASSLTGLTKRPKLSSTPPLSALGRLAEAAVAEKRAISPSIKEPSVVPIEVPPAVLLEEIEAAELEGNDDRLEGVLCGAVKQLKVTRAKPDSTLYLSLMYLAKIKPNIFATEGVIEALCSLLRRDASISFKAKGNSLVSVLACSLLMAAYEEDENWPEIFVKVYIEDSLGERVWVDSLHCKTFVDNIQTAFNTKTPPKSMLLQGEAGRGGGDLSAGNSPHPSLTEEEDSQAELLIAEEKLSPEQEGQLMPRPRYDELAESVEEYVLDMLRDQLTRRQPIDNVSRNLLRLLTATCGYKEVRLMAVQKLEMWLQNPKLTRPAQDLLMSVCVNCNTHGAEDTDVISHLIKIRLKPKVLLNHYMLCVRELLNAHKDNLGTAIKFVIFNELSNARNPNNMQLLYTVLQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREIIKQTKHEINFQAFCLGLMQERKEPQYVDMEFKERFVVHITDVLAVSMMLGITAQVKEAGIAWDKGEKKNLEVLRSFQNQIAAIQRDAVWWLHTVVPSISKLAPKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPILEDTLMRILVIGLSRELPLGPADAMELADHLVKRAAAVQADDVEVLKVERIQLINAILNLCTYHHPENIQLPPGYQPPNLAISTLYWKAWPLLLVVAAFNPENIGLAAWEEYPTLKMLMEMVMTNNYSYPPCTLTDEETRAEMMSRELQISQREKQEILAFEGHLAAASTKQTITESSSLLLSQLTSLDPKGPPRRPPPHILDQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSLDVLPVQCLCEFLLHDAADEPASAEEEEEGESKEQKAKKRQRQQKQRQLLGRLQDLLLGPRADEQTTCEVLDYFLRRLGSSQVASRVLAMKGLSLVLSEGSLRDGEDKDPPLEEDSGDSDTLQGYQWLLRDLPRLPLFDSVKTSTALALQQAIHMETDPQTISAYLVYLSQHTPAEEQGQHSDLALDVARLIVERSTVMSHLFSKRSRSPESDAVLLALLSIFSRYVQRMRTSKEGEEVYSWSESQDQVFLRWSSGETATMHILVVHAMVILLTLGPPRAGDGEFRALLDIWFPEKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVPRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVAHDPQTLEQNIMDKNYMAHLVEVQHERGASGGQTFHSLLTASLPARRDSTEVPKPKSSPEPPPGQGRTRAVTQVRALGPEDDLAGMLLQIFPLSPGPRWQGSSARPVALALQQALGQELARVRQGSPEVTGIAVRLLQAIATLLSSPHGGALVMSMHRHHFLACPLMRQLCQYQRCVPQDTGFSSLFLKVLMQILQWLDSPAVEAGPLQAQLKLFAAQYSARRRISDVRSGFLHLAESLSFRGDPEVVSSTIRAVVATLRSGEGCDVEPELVSKVLRGLVQARSPHLEELLAALFSSPSAFPASGPVAVVSALLLQEEEEPPAAGKQDADSCSPEAVRLGACSGLLVDWLEMLDPEVVSSCPDLQQRLLFSRSKGKGHPGLQVPSFRPYLLALLTHQSNWSTLHQCIRVLLGKSREQRLDPSASLDFLWACIHVPRIWQGRDQRTPQKRREELVLRVQAPELIGLVELILAEAETRSQDGDTGACSLLQARLPLLLSCCRSDDESIRKVTAHLTSCIQQRGDSALGKRCRDLLVQLYLQRPELRVPVPEVLLHSEGAAGSSVCKLDGLIHRFITLLADTSDSRASENRVADANMACRKLAVAHPLLLLRHLPMVAALLHGRTHLNFQEFRQQNHLTFFLHVLGVLELLQPQVFQSEHQGALWDCLLSFIRLLLNYRKSSRHLAPFISKFVHFTHKYITCNPPAAVAFLQKHSDVLHDLSFDSSDLVMLKSLLAGLSLPSRAGRADRGPDEGGDDDSSAGSLPLVSVSLFTPLTAAEMAPYTKRLSRGQTVEDLLEVLSDVDETSRRRPEILGFFSTSLQRLMSSAEESCRNLAFSLALRSIQNNPSIAADFLPTFMYCLGSRDFEVVQTALRNLPEYTLLCQEHAAVLLHRAFLVGMYGQVDTSAQISEALRILHMEAVM", "length": 2191, "header": "tr|I3LRU6-1|I3LRU6_PIG Isoform 1 of Integrator complex subunit 1 OS=Sus scrofa OX=9823 GN=INTS1 PE=1 SV=4 CANONICAL=I3LRU6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QB34-1", "url": "https://www.uniprot.org/uniprotkb/I3LRU6/entry#A0A5G2QB34-1", "sequence": { "sequence": "AYGGSQARGRIGAVAAGLRQIPPAVLLEEIEAAELEGNDDRLEGVLCGAVKQLKVTRAKPDSTLYLSLMYLAKIKPNIFATEGVIEALCSLLRRDASISFKAKGNSLVSVLACSLLMAAYEEDENWPEIFVKVYIEDSLGERVWVDSLHCKTFVDNIQTAFNTKTPPKSMLLQGEAGRGGGDLSAGNSPHPSLTEEEDSQAELLIAEEKLSPEQEGQLMPRYDELAESVEEYVLDMLRDQLTRRQPIDNVSRNLLRLLTATCGYKEVRLMAVQKLEMWLQNPKLTRPAQDLLMSVCVNCNTHGAEDTDVISHLIKIRLKPKVLLNHYMLCVRELLNAHKDNLGTAIKFVIFNELSNARNPNNMQLLYTVLQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREIIKQTKHEINFQAFCLGLMQERKEPQYVDMEFKERFVVHITDVLAVSMMLGITAQVKEAGIAWDKGEKKNLEVLRSFQNQIAAIQRDAVWWLHTVVPSISKLAPKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPILEDTLMRILVIGLSRELPLGPADAMELADHLVKRAAAVQADDVEVLKVERIQLINAILNLCTYHHPENIQLPPGYQPPNLAISTLYWKAWPLLLVVAAFNPENIGLAAWEEYPTLKMLMEMVMTNNYSYPPCTLTDEETRAEMMSRELQISQREKQEILAFEGHLAAASTKQTITESSSLLLSQLTSLDPKGPPRRPPPHILDQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSLDVLPVQCLCEFLLHDAADEPASAEEEEEGESKEQKAKKRQRQQKQRQLLGRLQDLLLGPRADEQTTCEVLDYFLRRLGSSQVASRVLAMKGLSLVLSEGSLRDGEDKDPPLEEDSGDSDTLQGYQWLLRDLPRLPLFDSVKTSTALALQQAIHMETDPQTISAYLVYLSQHTPAEEQGQHSDLALDVARLIVERSTVMSHLFSKRSRSPESDAVLLALLSIFSRYVQRMRTSKEGEEVYSWSESQDQVFLRWSSGETATMHILVVHAMVILLTLGPPRAGDGEFRALLDIWFPEKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVPRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVAHDPQTLEQNIMDKNYMAHLVEVQHERGASGGQTFHSLLTASLPARRDSTEVPKPKSSPEPPPGQGRTRAVTQVRALGPEDDLAGMLLQIFPLSPGPRWQGSSARPVALALQQALGQELARVRQGSPEVTGIAVRLLQAIATLLSSPHGGALVMSMHRHHFLACPLMRQLCQYQRCVPQDTGFSSLFLKVLMQILQWLDSPAVEAGPLQAQLKLFAAQYSARRRISDVRSGFLHLAESLSFRGDPEVVSSTIRAVVATLRSGEGCDVEPELVSKVLRGLVQARSPHLEELLAALFSSPSAFPASGPVAVVSALLLQEEEEPPAAGKQDADSCSPEAVRLGACSGLLVDWLEMLDPEVVSSCPDLQQRLLFSRSKGKGHPGLQVPSFRPYLLALLTHQSNWSTLHQCIRVLLGKSREQRLDPSASLDFLWACIHVPRIWQGRDQRTPQKRREELVLRVQAPELIGLVELILAEAETRSQDGDTGACSLLQARLPLLLSCCRSDDESIRKVTAHLTSCIQQRGDSALGKRCRDLLVQLYLQRPELRVPVPEVLLHSEGAAGSSVCKLDGLIHRFITLLADTSDSRASENRVADANMACRKLAVAHPLLLLRHLPMVAALLHGRTHLNFQEFRQQNHLTFFLHVLGVLELLQPQVFQSEHQGALWDCLLSFIRLLLNYRKSSRHLAPFISKFVHFTHKYITCNPPAAVAFLQKHSDVLHDLSFDSSDLVMLKSLLAGLSLPSRAGRADRGPDEGGDDDSSAGSLPLVSVSLFTPLTAAEMAPYTKRLSRGQTVEDLLEVLSDVDETSRRRPEILGFFSTSLQRLMSSAEESCRNLAFSLALRSIQNNPSIAADFLPTFMYCLGSRDFEVVQTALRNLPEYTLLCQEHAAVLLHRAFLVGMYGQVDTSAQISEALRILHMEAVM", "length": 2093, "header": "tr|A0A5G2QB34-1|I3LRU6_PIG Computationally mapped isoform of Integrator complex subunit 1 OS=Sus scrofa OX=9823 GN=INTS1 PE=1 SV=1 CANONICAL=I3LRU6-1" }, "locus": { "chromosome": "3", "start_pos": 1003485, "end_pos": 979710, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000086151.2", "url": "https://www.ensembl.org/id/ENSSSCT00000086151.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000061253.1", "url": "https://www.ensembl.org/id/ENSSSCP00000061253.1" } ] } }, { "isoform_ac": "F1RIV4-1", "url": "https://www.uniprot.org/uniprotkb/I3LRU6/entry#F1RIV4-1", "sequence": { "sequence": "MNRAKPTTVRRPSAAAKPSGHPPPGDFIALGSKGQASESKTASTLLKPAPSGLPSERKRDAAAALAGASSLTGLTKRPKLSSTPPLSALGRLAEAAVAEKRAISPSIKEPSVVPIEVPPAVLLEEIEAAELEGNDDRLEGVLCGAVKQLKVTRAKPDSTLYLSLMYLAKIKPNIFATEGVIEALCSLLRRDASISFKAKGNSLVSVLACSLLMAAYEEDENWPEIFVKVYIEDSLGERVWVDSLHCKTFVDNIQTAFNTKTPPKSMLLQGEAGRGGGDLSAGNSPHPSLTEEEDSQAELLIAEEKLSPEQEGQLMPRYDELAESVEEYVLDMLRDQLTRRQPIDNVSRNLLRLLTATCGYKEVRLMAVQKLEMWLQNPKLTRPAQDLLMSVCVNCNTHGAEDTDVISHLIKIRLKPKVLLNHYMLCVRELLNAHKDNLGTAIKFVIFNELSNARNPNNMQLLYTVLQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREIIKQTKHEINFQAFCLGLMQERKEPQYVDMEFKERFVVHITDVLAVSMMLGITAQVKEAGIAWDKGEKKNLEVLRSFQNQIAAIQRDAVWWLHTVVPSISKLAPKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPILEDTLMRILVIGLSRELPLGPADAMELADHLVKRAAAVQADDVEVLKVERIQLINAILNLCTYHHPENIQLPPGYQPPNLAISTLYWKAWPLLLVVAAFNPENIGLAAWEEYPTLKMLMEMVMTNNYSYPPCTLTDEETRAEMMSRELQISQREKQEILAFEGHLAAASTKQTITESSSLLLSQLTSLDPKGPPRRPPPHILDQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSLDVLPVQCLCEFLLHDAADEPASAEEEEEGESKEQKAKKRQRQQKQRQLLGRLQDLLLGPRADEQTTCEVLDYFLRRLGSSQVASRVLAMKGLSLVLSEGSLRDGEDKDPPLEEDSGDSDTLQGYQWLLRDLPRLPLFDSVKTSTALALQQAIHMETDPQTISAYLVYLSQHTPAEEQGQHSDLALDVARLIVERSTVMSHLFSKRSRSPESDAVLLALLSIFSRYVQRMRTSKEGEEVYSWSESQDQVFLRWSSGETATMHILVVHAMVILLTLGPPRAGDGEFRALLDIWFPEKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVPRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVAHDPQTLEQNIMDKNYMAHLVEVQHERGASGGQTFHSLLTASLPARRDSTEVPKPKSSPEPPPGQGRTRAVTQVRALGPEDDLAGMLLQIFPLSPGPRWQGSSARPVALALQQALGQELARVRQGSPEVTGIAVRLLQAIATLLSSPHGGALVMSMHRHHFLACPLMRQLCQYQRCVPQDTGFSSLFLKVLMQILQWLDSPAVEAGPLQAQLKLFAAQYSARRRISDVRSGFLHLAESLSFRGDPEVVSSTIRAVVATLRSGEGCDVEPELVSKVLRGLVQARSPHLEELLAALFSSPSAFPASGPVAVVSALLLQEEEEPPAAGKQDADSCSPEAVRLGACSGLLVDWLEMLDPEVVSSCPDLQQRLLFSRSKGKGQAQVPSFRPYLLALLTHQSNWSTLHQCIRVLLGKSREQRLDPSASLDFLWACIHVPRIWQGRDQRTPQKRREELVLRVQAPELIGLVELILAEAETRSQDGDTGACSLLQARLPLLLSCCRSDDESIRKVTAHLTSCIQQRGDSALGKRCRDLLVQLYLQRPELRVPVPEVLLHSEGAAGSSVCKLDGLIHRFITLLADTSDSRASENRVADANMACRKLAVAHPLLLLRHLPMVAALLHGRTHLNFQEFRQQNHLTFFLHVLGVLELLQPQVFQSEHQGALWDCLLSFIRLLLNYRKSSRHLAPFISKFVHFTHKYITCNPPAAVAFLQKHSDVLHDLSFDSSDLVMLKSLLAGLSLPSRAGRADRGPDEGGDDDSSAGSLPLVSVSLFTPLTAAEMAPYTKRLSRGQTVEDLLEVLSDVDETSRRRPEILGFFSTSLQRLMSSAEESCRNLAFSLALRSIQNNPSIAADFLPTFMYCLGSRDFEVVQTALRNLPEYTLLCQEHAAVLLHRAFLVGMYGQVDTSAQISEALRILHMEAVM", "length": 2187, "header": "tr|F1RIV4-1|F1RIV4_PIG Computationally mapped isoform of Integrator complex subunit 1 OS=Sus scrofa OX=9823 GN=INTS1 PE=1 SV=5 CANONICAL=I3LRU6-1" }, "locus": { "chromosome": "3", "start_pos": 1005293, "end_pos": 979710, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000008290.5", "url": "https://www.ensembl.org/id/ENSSSCT00000008290.5" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000008071.5", "url": "https://www.ensembl.org/id/ENSSSCP00000008071.5" } ] } }, { "isoform_ac": "I3LRU6-1", "url": "https://www.uniprot.org/uniprotkb/I3LRU6/entry#I3LRU6-1", "sequence": { "sequence": "MNRAKPTTVRRPSAAAKPSGHPPPGDFIALGSKGQASESKTASTLLKPAPSGLPSERKRDAAAALAGASSLTGLTKRPKLSSTPPLSALGRLAEAAVAEKRAISPSIKEPSVVPIEVPPAVLLEEIEAAELEGNDDRLEGVLCGAVKQLKVTRAKPDSTLYLSLMYLAKIKPNIFATEGVIEALCSLLRRDASISFKAKGNSLVSVLACSLLMAAYEEDENWPEIFVKVYIEDSLGERVWVDSLHCKTFVDNIQTAFNTKTPPKSMLLQGEAGRGGGDLSAGNSPHPSLTEEEDSQAELLIAEEKLSPEQEGQLMPRPRYDELAESVEEYVLDMLRDQLTRRQPIDNVSRNLLRLLTATCGYKEVRLMAVQKLEMWLQNPKLTRPAQDLLMSVCVNCNTHGAEDTDVISHLIKIRLKPKVLLNHYMLCVRELLNAHKDNLGTAIKFVIFNELSNARNPNNMQLLYTVLQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREIIKQTKHEINFQAFCLGLMQERKEPQYVDMEFKERFVVHITDVLAVSMMLGITAQVKEAGIAWDKGEKKNLEVLRSFQNQIAAIQRDAVWWLHTVVPSISKLAPKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPILEDTLMRILVIGLSRELPLGPADAMELADHLVKRAAAVQADDVEVLKVERIQLINAILNLCTYHHPENIQLPPGYQPPNLAISTLYWKAWPLLLVVAAFNPENIGLAAWEEYPTLKMLMEMVMTNNYSYPPCTLTDEETRAEMMSRELQISQREKQEILAFEGHLAAASTKQTITESSSLLLSQLTSLDPKGPPRRPPPHILDQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADLVQSSEGSLDVLPVQCLCEFLLHDAADEPASAEEEEEGESKEQKAKKRQRQQKQRQLLGRLQDLLLGPRADEQTTCEVLDYFLRRLGSSQVASRVLAMKGLSLVLSEGSLRDGEDKDPPLEEDSGDSDTLQGYQWLLRDLPRLPLFDSVKTSTALALQQAIHMETDPQTISAYLVYLSQHTPAEEQGQHSDLALDVARLIVERSTVMSHLFSKRSRSPESDAVLLALLSIFSRYVQRMRTSKEGEEVYSWSESQDQVFLRWSSGETATMHILVVHAMVILLTLGPPRAGDGEFRALLDIWFPEKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVPRLVDAALQDLEPQQLLLFVQSFGIPVSSMSKLLQYLDQAVAHDPQTLEQNIMDKNYMAHLVEVQHERGASGGQTFHSLLTASLPARRDSTEVPKPKSSPEPPPGQGRTRAVTQVRALGPEDDLAGMLLQIFPLSPGPRWQGSSARPVALALQQALGQELARVRQGSPEVTGIAVRLLQAIATLLSSPHGGALVMSMHRHHFLACPLMRQLCQYQRCVPQDTGFSSLFLKVLMQILQWLDSPAVEAGPLQAQLKLFAAQYSARRRISDVRSGFLHLAESLSFRGDPEVVSSTIRAVVATLRSGEGCDVEPELVSKVLRGLVQARSPHLEELLAALFSSPSAFPASGPVAVVSALLLQEEEEPPAAGKQDADSCSPEAVRLGACSGLLVDWLEMLDPEVVSSCPDLQQRLLFSRSKGKGHPGLQVPSFRPYLLALLTHQSNWSTLHQCIRVLLGKSREQRLDPSASLDFLWACIHVPRIWQGRDQRTPQKRREELVLRVQAPELIGLVELILAEAETRSQDGDTGACSLLQARLPLLLSCCRSDDESIRKVTAHLTSCIQQRGDSALGKRCRDLLVQLYLQRPELRVPVPEVLLHSEGAAGSSVCKLDGLIHRFITLLADTSDSRASENRVADANMACRKLAVAHPLLLLRHLPMVAALLHGRTHLNFQEFRQQNHLTFFLHVLGVLELLQPQVFQSEHQGALWDCLLSFIRLLLNYRKSSRHLAPFISKFVHFTHKYITCNPPAAVAFLQKHSDVLHDLSFDSSDLVMLKSLLAGLSLPSRAGRADRGPDEGGDDDSSAGSLPLVSVSLFTPLTAAEMAPYTKRLSRGQTVEDLLEVLSDVDETSRRRPEILGFFSTSLQRLMSSAEESCRNLAFSLALRSIQNNPSIAADFLPTFMYCLGSRDFEVVQTALRNLPEYTLLCQEHAAVLLHRAFLVGMYGQVDTSAQISEALRILHMEAVM", "length": 2191, "header": "tr|I3LRU6-1|I3LRU6_PIG Isoform 1 of Integrator complex subunit 1 OS=Sus scrofa OX=9823 GN=INTS1 PE=1 SV=4 CANONICAL=I3LRU6-1" }, "locus": { "chromosome": "3", "start_pos": 1005293, "end_pos": 979710, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024640.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024640.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026836.4", "url": "https://www.ensembl.org/id/ENSSSCP00000026836.4" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QB34", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QB34" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-6807505", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-6807505", "resource": "Reactome", "description": "RNA polymerase II transcribes snRNA genes" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "U2 snRNA 3'-end processing", "id": "GO:0034474", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034474", "evidence": [ { "database": "UniProtKB", "id": "I3LRU6", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" } ], "pmid": "" }, { "name": "regulation of transcription elongation by RNA polymerase II", "id": "GO:0034243", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034243", "evidence": [ { "database": "UniProtKB", "id": "I3LRU6", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" } ], "pmid": "" }, { "name": "RNA polymerase II transcription initiation surveillance", "id": "GO:0160240", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160240", "evidence": [ { "database": "UniProtKB", "id": "I3LRU6", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "integrator complex", "id": "GO:0032039", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032039", "evidence": [ { "database": "UniProtKB", "id": "I3LRU6", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" } ], "pmid": "" }, { "name": "INTAC complex", "id": "GO:0160232", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0160232", "evidence": [ { "database": "UniProtKB", "id": "I3LRU6", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1670, "end_pos": 1672, "annotation": "n_glycosylation_sequon" }, { "start_pos": 347, "end_pos": 349, "annotation": "n_glycosylation_sequon" }, { "start_pos": 776, "end_pos": 778, "annotation": "n_glycosylation_sequon" }, { "start_pos": 859, "end_pos": 861, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LRU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" }, { "id": "PF22929", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22929" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Integrator complex subunit 1 INTS2-binding", "eco_id": "ECO_0000259", "start_pos": 972, "end_pos": 1306, "start_aa": "Glu", "end_aa": "Phe", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LRU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" }, { "id": "PF22927", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22927" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Integrator complex subunit 1 R3", "eco_id": "ECO_0000259", "start_pos": 1836, "end_pos": 1992, "start_aa": "Leu", "end_aa": "Asp", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LRU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" }, { "id": "PF22928", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF22928" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Integrator complex subunit 1 R4", "eco_id": "ECO_0000259", "start_pos": 2053, "end_pos": 2153, "start_aa": "Lys", "end_aa": "Gln", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LRU6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LRU6" }, { "id": "PF12432", "database": "Pfam", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12432" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Integrator complex subunit 1 RPB2-binding", "eco_id": "ECO_0000259", "start_pos": 325, "end_pos": 480, "start_aa": "Glu", "end_aa": "Ala", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1670, "end_pos": 1672 }, { "start_pos": 347, "end_pos": 349 }, { "start_pos": 776, "end_pos": 778 }, { "start_pos": 859, "end_pos": 861 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LQ83-1", "uniprot_ac": "I3LQ83", "uniprot_id": "I3LQ83_PIG", "mass": { "chemical_mass": 114674.0, "monoisotopic_mass": 114674.0 }, "refseq": { "ac": "XP_013852528", "name": "ubiquitin-associated protein 2-like isoform X20", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013852528" }, "gene_names": [ { "name": "UBAP2L", "type": "recommended", "evidence": [ { "id": "I3LQ83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ] }, { "name": "UBAP2L", "type": "synonym", "evidence": [ { "id": "XP_013852528", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013852528" } ] } ], "protein_names": [ { "name": "Ubiquitin associated protein 2 like", "type": "synonym", "evidence": [ { "id": "I3LQ83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#names_and_taxonomy" } ] }, { "name": "ubiquitin-associated protein 2-like isoform X20", "type": "synonym", "evidence": [ { "id": "XP_013852528", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013852528" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "UBAP2L", "url": "https://www.uniprot.org/uniprotkb/I3LQ83", "locus": { "chromosome": "4", "start_pos": 95471126, "end_pos": 95520425, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000006553", "url": "https://www.ensembl.org/id/ENSSSCG00000006553" } ] } } ], "crossref": [ { "id": "I3LQ83", "url": "https://alphafold.ebi.ac.uk/entry/I3LQ83", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000006553", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000006553", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd14277", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd14277", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100517710", "url": "https://www.ncbi.nlm.nih.gov/gene/100517710", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009060", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009060", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR015940", "url": "https://www.ebi.ac.uk/interpro/entry/IPR015940", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR022166", "url": "https://www.ebi.ac.uk/interpro/entry/IPR022166", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR051833", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051833", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR060532", "url": "https://www.ebi.ac.uk/interpro/entry/IPR060532", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "A0A5G2QD79", "url": "https://www.orthodb.org/?gene=A0A5G2QD79", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "I3LQ83", "url": "https://www.orthodb.org/?gene=I3LQ83", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16308", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16308", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16308:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16308:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF12478", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF12478", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF28540", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF28540", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_013852528", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_013852528", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZKU8", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZKU8-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZKU8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0B3", "url": "https://www.uniprot.org/uniprotkb/A0A287A0B3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287A0B3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287A0B3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRL3", "url": "https://www.uniprot.org/uniprotkb/A0A287BRL3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287BRL3-1", "url": "https://www.uniprot.org/uniprotkb/A0A287BRL3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD79", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QD79-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD79-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RGK9", "url": "https://www.uniprot.org/uniprotkb/F1RGK9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1RGK9-1", "url": "https://www.uniprot.org/uniprotkb/F1RGK9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5C7", "url": "https://www.uniprot.org/uniprotkb/I3L5C7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L5C7-1", "url": "https://www.uniprot.org/uniprotkb/I3L5C7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQ83-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPAGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTSAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQTGSGQRSQTSSIPQKPQTNKSAYNSYSWGAN", "length": 1087, "header": "tr|I3LQ83-1|I3LQ83_PIG Isoform 1 of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=1 SV=3 CANONICAL=I3LQ83-1" }, "isoforms": [ { "isoform_ac": "A0A286ZKU8-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#A0A286ZKU8-1", "sequence": { "sequence": "MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPAGRGTERGRRGRGRGRGDQTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTRLDFIGVEGSNYPRKFETAPGAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEEQVMKLNDDMLEPTPFQSPFHLHSSGNLKRKDFMVTNRDTQTQTPC", "length": 1124, "header": "tr|A0A286ZKU8-1|A0A286ZKU8_PIG Computationally mapped isoform of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=4 SV=3 CANONICAL=I3LQ83-1" }, "locus": { "chromosome": "4", "start_pos": 95515536, "end_pos": 95472829, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000044373.3", "url": "https://www.ensembl.org/id/ENSSSCT00000044373.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000032095.3", "url": "https://www.ensembl.org/id/ENSSSCP00000032095.3" } ] } }, { "isoform_ac": "A0A287A0B3-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#A0A287A0B3-1", "sequence": { "sequence": "MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPAGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTRLDFIGVEGSNYPRKFETAPGAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEEQVMKLNDDMLEPTPFQSPFHLHSSGNLKRKDFMVTNRDTQTQTPC", "length": 1137, "header": "tr|A0A287A0B3-1|A0A287A0B3_PIG Computationally mapped isoform of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=1 SV=3 CANONICAL=I3LQ83-1" }, "locus": { "chromosome": "4", "start_pos": 95515536, "end_pos": 95472829, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047263.3", "url": "https://www.ensembl.org/id/ENSSSCT00000047263.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000037188.3", "url": "https://www.ensembl.org/id/ENSSSCP00000037188.3" } ] } }, { "isoform_ac": "A0A287BRL3-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#A0A287BRL3-1", "sequence": { "sequence": "LGVESETFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTSAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQTGSGQRSQTSSIPQKPQTNKSAYNSYSWGAN", "length": 896, "header": "tr|A0A287BRL3-1|A0A287BRL3_PIG Computationally mapped isoform of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=1 SV=2 CANONICAL=I3LQ83-1" }, "locus": { "chromosome": "4", "start_pos": 95504373, "end_pos": 95472023, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000047273.2", "url": "https://www.ensembl.org/id/ENSSSCT00000047273.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059149.2", "url": "https://www.ensembl.org/id/ENSSSCP00000059149.2" } ] } }, { "isoform_ac": "A0A5G2QD79-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#A0A5G2QD79-1", "sequence": { "sequence": "MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRVRGQENGLDGTKSGGPAGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTSAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGRKYPPPYKHFWTAES", "length": 976, "header": "tr|A0A5G2QD79-1|I3LQ83_PIG Computationally mapped isoform of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=1 SV=2 CANONICAL=I3LQ83-1" }, "locus": { "chromosome": "4", "start_pos": 95515536, "end_pos": 95477865, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090271.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090271.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000060005.2", "url": "https://www.ensembl.org/id/ENSSSCP00000060005.2" } ] } }, { "isoform_ac": "F1RGK9-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#F1RGK9-1", "sequence": { "sequence": "MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPAGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTRLDFIGVEGSNYPRKFETAPGAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQDILSLVDDQLGE", "length": 1088, "header": "tr|F1RGK9-1|F1RGK9_PIG Computationally mapped isoform of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=1 SV=4 CANONICAL=I3LQ83-1" }, "locus": { "chromosome": "4", "start_pos": 95515536, "end_pos": 95471406, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000007178.4", "url": "https://www.ensembl.org/id/ENSSSCT00000007178.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000006985.4", "url": "https://www.ensembl.org/id/ENSSSCP00000006985.4" } ] } }, { "isoform_ac": "I3L5C7-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#I3L5C7-1", "sequence": { "sequence": "MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPAGRGTERGRRGRGRGRGDQTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTRLDFIGVEGSNYPRKFETAPGAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTAYPLLPYLTPIPHFWRRGSKKESE", "length": 998, "header": "tr|I3L5C7-1|I3LQ83_PIG Computationally mapped isoform of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=1 SV=3 CANONICAL=I3LQ83-1" }, "locus": { "chromosome": "4", "start_pos": 95515536, "end_pos": 95478581, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028059.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028059.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019226.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019226.3" } ] } }, { "isoform_ac": "I3LQ83-1", "url": "https://www.uniprot.org/uniprotkb/I3LQ83/entry#I3LQ83-1", "sequence": { "sequence": "MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGREFRGQENGLDGTKSGGPAGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPANTDDNYGNNSGNTWNNTGHFEPDDGTSAWRTATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENDSSNLDPSQAPSLAQPLVFSNSKQSAISQPASGNTFSHHNMVSMLGKGFGDVTEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQSGTTTTSSWDMGSTTQSPSLVQYDLKTPNDSTVHSPFTKRQAFTSSSTMMEVFLQEKPPAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQHSSSLGGLSHNEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYNTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHSGTPAASFNLPSALGSGGPINPATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQTGSGQRSQTSSIPQKPQTNKSAYNSYSWGAN", "length": 1087, "header": "tr|I3LQ83-1|I3LQ83_PIG Isoform 1 of Ubiquitin associated protein 2 like OS=Sus scrofa OX=9823 GN=UBAP2L PE=1 SV=3 CANONICAL=I3LQ83-1" }, "locus": { "chromosome": "4", "start_pos": 95515536, "end_pos": 95472023, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027198.4", "url": "https://www.ensembl.org/id/ENSSSCT00000027198.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026261.3", "url": "https://www.ensembl.org/id/ENSSSCP00000026261.3" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 841, "start_aa": "Thr", "end_pos": 841, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr841", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 936, "start_aa": "Thr", "end_pos": 936, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr936", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QD79", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QD79" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 4, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" }, { "name": "chromosome", "id": "GO:0005694", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005694", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" }, { "name": "PcG protein complex", "id": "GO:0031519", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031519", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "hematopoietic stem cell homeostasis", "id": "GO:0061484", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0061484", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" }, { "name": "binding of sperm to zona pellucida", "id": "GO:0007339", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007339", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" }, { "name": "stress granule assembly", "id": "GO:0034063", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0034063", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" }, { "name": "positive regulation of stress granule assembly", "id": "GO:0062029", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0062029", "evidence": [ { "database": "UniProtKB", "id": "I3LQ83", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1075, "end_pos": 1077, "annotation": "n_glycosylation_sequon" }, { "start_pos": 216, "end_pos": 218, "annotation": "n_glycosylation_sequon" }, { "start_pos": 21, "end_pos": 23, "annotation": "n_glycosylation_sequon" }, { "start_pos": 223, "end_pos": 225, "annotation": "n_glycosylation_sequon" }, { "start_pos": 263, "end_pos": 265, "annotation": "n_glycosylation_sequon" }, { "start_pos": 273, "end_pos": 275, "annotation": "n_glycosylation_sequon" }, { "start_pos": 297, "end_pos": 299, "annotation": "n_glycosylation_sequon" }, { "start_pos": 410, "end_pos": 412, "annotation": "n_glycosylation_sequon" }, { "start_pos": 473, "end_pos": 475, "annotation": "n_glycosylation_sequon" }, { "start_pos": 564, "end_pos": 566, "annotation": "n_glycosylation_sequon" }, { "start_pos": 657, "end_pos": 659, "annotation": "n_glycosylation_sequon" }, { "start_pos": 687, "end_pos": 689, "annotation": "n_glycosylation_sequon" }, { "start_pos": 769, "end_pos": 771, "annotation": "n_glycosylation_sequon" }, { "start_pos": 885, "end_pos": 887, "annotation": "n_glycosylation_sequon" }, { "start_pos": 944, "end_pos": 946, "annotation": "n_glycosylation_sequon" }, { "start_pos": 948, "end_pos": 950, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LQ83-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 1087, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LQ83-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LQ83" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LQ83", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQ83" }, { "id": "PS50030", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50030" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "UBA", "eco_id": "ECO_0000259", "start_pos": 49, "end_pos": 89, "start_aa": "Asp", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], 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"Protein Classification" ] }, { "id": "IPR051303", "url": "https://www.ebi.ac.uk/interpro/entry/IPR051303", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100513998", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100513998", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "I3LLX9", "url": "https://www.orthodb.org/?gene=I3LLX9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR15712", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15712", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR15712:SF19", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR15712:SF19", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF04826", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF04826", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "NP_001231852", "url": 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"database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RFH1-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RFH1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SB68", "url": "https://www.uniprot.org/uniprotkb/F1SB68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1SB68-1", "url": "https://www.uniprot.org/uniprotkb/F1SB68-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLX9", "url": "https://www.uniprot.org/uniprotkb/I3LLX9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LLX9-1", "url": "https://www.uniprot.org/uniprotkb/I3LLX9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MGGARDVGWVAAGLVLAAGACYCIYRLTRGQRRGARRVGLRPSRSAEDLTNGSYDDILNAEQLQKLLYLLESTEDPVIIEKALVTLGNNAAFSANQVIIRELGGITIVGSQINNPNQSIKEKALNALNNLSVNVENQIKIKVYVNQVCEDVLSGPLNSAVQLAGLRLLTNMTVTNDHQHMLSTYIADLFHVLLTGNGSTKVQVLKLLLNLSENPAMTDGLLGAQVDSSFLSLFDGHVAKEILVRVLTLFQNIDNCLKKEGRLALQPAFPEGSLFYLLYGDECAQKMRALVYHHDADVKEKVTMIPKF", "length": 307, "header": "tr|I3LLX9-1|I3LLX9_PIG Isoform 1 of Armadillo repeat containing 10 OS=Sus scrofa OX=9823 GN=ARMC10 PE=1 SV=1 CANONICAL=I3LLX9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QDX6-1", "url": "https://www.uniprot.org/uniprotkb/I3LLX9/entry#A0A5G2QDX6-1", "sequence": { "sequence": "MGGARDVGWVAAGLVLAAGACYCIYRLTRGQRRGARRVGLRPSRSAEDLTNGSYDDILNAEQLQKLLYLLESTEDPVIIEKALVTLGNNAAFSANQVIIRELGGITIVGSQINNPNQSIKEKALNALNNLSVNVENQIKIKVDSSFLSLFDGHVAKEILVRVLTLFQNIDNCLKKEGRLALQPAFPEGSLFYLLYGDECAQKMRALVYHHDADVKEKVTMIPKF", "length": 224, "header": "tr|A0A5G2QDX6-1|I3LLX9_PIG Computationally mapped isoform of Armadillo repeat containing 10 OS=Sus scrofa OX=9823 GN=ARMC10 PE=1 SV=1 CANONICAL=I3LLX9-1" }, "locus": { "chromosome": "9", "start_pos": 103209728, "end_pos": 103179809, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087328.1", "url": "https://www.ensembl.org/id/ENSSSCT00000087328.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062353.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062353.1" } ] } }, { "isoform_ac": "A0A5G2QH02-1", "url": "https://www.uniprot.org/uniprotkb/I3LLX9/entry#A0A5G2QH02-1", "sequence": { "sequence": "MGGARDVGWVAAGLVLAAGACYCIYRLTRGQRRGARRVGLRPSRSAEDLTNGSYDDILNAEQLQKLLYLLESTEDPVIIEKALVTLGNNAAFSANQVIIRELGGITIVGSQINNPNQSIKEKALNALNNLSVNVENQIKIKVYVNQVCEDVLSGPLNSAVQLAGLRLLTNMTVTNDHQHMLSTYIADLFHVLLTGNGSTKVDSSFLSLFDGHVAKEILVRVLTLFQNIDNCLKKEGRLALQPAFPEGSLFYLLYGDECAQKMRALVYHHDADVKEKVTMIPKF", "length": 283, "header": "tr|A0A5G2QH02-1|I3LLX9_PIG Computationally mapped isoform of Armadillo repeat containing 10 OS=Sus scrofa OX=9823 GN=ARMC10 PE=1 SV=1 CANONICAL=I3LLX9-1" }, "locus": { "chromosome": "9", "start_pos": 103209728, "end_pos": 103179809, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072147.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072147.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064058.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064058.1" } ] } }, { "isoform_ac": "A0A5G2QNA5-1", "url": "https://www.uniprot.org/uniprotkb/I3LLX9/entry#A0A5G2QNA5-1", "sequence": { "sequence": "MGGARDVGWVAAGLVLAAGACYCIYRLTRGQRRGARRVGLRPSRSAEDLTNGSYDDILNAEQLQKLLYLLESTEDPVIIEKALVTLGNNAAFSANQVIIRELGGITIVGSQINNPNQSIKEKALNALNNLSVNVENQIKIKVQVLKLLLNLSENPAMTDGLLGAQVDSSFLSLFDGHVAKEILVRVLTLFQNIDNCLKKEGRLALQPAFPEGSLFYLLYGDECAQKMRALVYHHDADVKEKVTMIPKF", "length": 248, "header": "tr|A0A5G2QNA5-1|I3LLX9_PIG Computationally mapped isoform of Armadillo repeat containing 10 OS=Sus scrofa OX=9823 GN=ARMC10 PE=1 SV=1 CANONICAL=I3LLX9-1" }, "locus": { "chromosome": "9", "start_pos": 103209728, "end_pos": 103179809, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000073673.1", "url": "https://www.ensembl.org/id/ENSSSCT00000073673.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000059796.1", "url": "https://www.ensembl.org/id/ENSSSCP00000059796.1" } ] } }, { "isoform_ac": "A0A5G2RFH1-1", "url": "https://www.uniprot.org/uniprotkb/I3LLX9/entry#A0A5G2RFH1-1", "sequence": { "sequence": "ARAAKGLAGFRPCPPGPALRAAPARAWAAPGTWAGWRRRRGARRVGLRPSRSAEDLTNGSYDDILNAEQLQKLLYLLESTEDPVIIEKALVTLGNNAAFSANQVIIRELGGITIVGSQINNPNQSIKEKALNALNNLSVNVENQIKIKVYVNQVCEDVLSGPLNSAVQLAGLRLLTNMTVTNDHQHMLSTYIADLFHVLLTGNGSTKVQVLKLLLNLSENPAMTDGLLGAQVDSSFLSLFDGHVAKEILVRVLTLFQNIDNCLKKEGRLALQPAFPEGSLFYLLYGDECAQKMRALVYHHDADVKEKVTMIPKF", "length": 314, "header": "tr|A0A5G2RFH1-1|A0A5G2RFH1_PIG Computationally mapped isoform of Armadillo repeat containing 10 OS=Sus scrofa OX=9823 GN=ARMC10 PE=1 SV=1 CANONICAL=I3LLX9-1" }, "locus": { "chromosome": "9", "start_pos": 103209728, "end_pos": 103179732, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000092514.1", "url": "https://www.ensembl.org/id/ENSSSCT00000092514.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000076432.1", "url": "https://www.ensembl.org/id/ENSSSCP00000076432.1" } ] } }, { "isoform_ac": "F1SB68-1", "url": "https://www.uniprot.org/uniprotkb/I3LLX9/entry#F1SB68-1", "sequence": { "sequence": "MGGARDVGWVAAGLVLAAGACYCIYRLTRGQRRGARRVGLRPSRSAEDLTNGSYDDILNAEQLQKLLYLLESTEDPVIIEKALVTLGNNAAFSANQVIIRELGGITIVGSQINNPNQSIKEKALNALNNLSVNVENQIKIKVYVNQVCEDVLSGPLNSAVQLAGLRLLTNMTVTNDHQHMLSTYIADLFHVLLTGNGSTKVQVLKLLLNLSENPAMTDGLLGAQVDSSFLSLFDGHVAKEILVRVLTLFQNIDNCLKKEGRLALQPAFPEGSLFYLLYGDECAQKMRALVYHHDADVKEKVQLRCDASDEEYLSQLPRLQLVLSKSGGNYLNSCPEKPAIILNLRNKLPPDRKLKKARASITPPHLPPIFRSFRG", "length": 375, "header": "tr|F1SB68-1|I3LLX9_PIG Computationally mapped isoform of Armadillo repeat containing 10 OS=Sus scrofa OX=9823 GN=ARMC10 PE=1 SV=2 CANONICAL=I3LLX9-1" }, "locus": { "chromosome": "9", "start_pos": 103262011, "end_pos": 103179809, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023341.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023341.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000020280.3", "url": "https://www.ensembl.org/id/ENSSSCP00000020280.3" } ] } }, { "isoform_ac": "I3LLX9-1", "url": "https://www.uniprot.org/uniprotkb/I3LLX9/entry#I3LLX9-1", "sequence": { "sequence": "MGGARDVGWVAAGLVLAAGACYCIYRLTRGQRRGARRVGLRPSRSAEDLTNGSYDDILNAEQLQKLLYLLESTEDPVIIEKALVTLGNNAAFSANQVIIRELGGITIVGSQINNPNQSIKEKALNALNNLSVNVENQIKIKVYVNQVCEDVLSGPLNSAVQLAGLRLLTNMTVTNDHQHMLSTYIADLFHVLLTGNGSTKVQVLKLLLNLSENPAMTDGLLGAQVDSSFLSLFDGHVAKEILVRVLTLFQNIDNCLKKEGRLALQPAFPEGSLFYLLYGDECAQKMRALVYHHDADVKEKVTMIPKF", "length": 307, "header": "tr|I3LLX9-1|I3LLX9_PIG Isoform 1 of Armadillo repeat containing 10 OS=Sus scrofa OX=9823 GN=ARMC10 PE=1 SV=1 CANONICAL=I3LLX9-1" }, "locus": { "chromosome": "9", "start_pos": 103209728, "end_pos": 103179809, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031102.3", "url": "https://www.ensembl.org/id/ENSSSCT00000031102.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025099.1", "url": "https://www.ensembl.org/id/ENSSSCP00000025099.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", 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"evidence": [ { "id": "I3LDH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDH6" } ] } ], "protein_names": [ { "name": "Lipoxygenase homology PLAT domains 1", "type": "synonym", "evidence": [ { "id": "I3LDH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDH6/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LDH6", "url": "https://www.uniprot.org/uniprotkb/I3LDH6" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOXHD1", "url": "https://www.uniprot.org/uniprotkb/I3LDH6", "locus": { "chromosome": "1", "start_pos": 96080824, "end_pos": 96276992, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000004503", "url": "https://www.ensembl.org/id/ENSSSCG00000004503" } ] } } ], "crossref": [ { "id": "ENSSSCG00000004503", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000004503", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd01756", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01756", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100519879", "url": "https://www.ncbi.nlm.nih.gov/gene/100519879", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001024", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001024", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036392", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036392", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR052970", "url": "https://www.ebi.ac.uk/interpro/entry/IPR052970", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100519879", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519879", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "MICEMPA", "url": "https://omabrowser.org/oma/group/MICEMPA/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR45901", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45901", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR45901:SF3", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR45901:SF3", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF01477", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF01477", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QF10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF10", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QF10-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF10-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R195", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R195", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R195-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R195-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R727", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R727", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R727-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R727-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNC7", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNC7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FNC7-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FNC7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDH6", "url": "https://www.uniprot.org/uniprotkb/I3LDH6", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LDH6-1", "url": "https://www.uniprot.org/uniprotkb/I3LDH6-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MMPQKKKRRKKDIDFLALYEQELLNYASEDDEEELEHEYYKAKVYEVVTATGDVRGAGTDANVFITIFGENGLSPKLHLTSKSKSAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNASWYLDRVIVTDMKRPHLRYYFNCNNWLSNVEGDRQWCRDLLASFNPMDMPRGNKYEVKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFMLDAPDLGQLMKINVGHNNKGGSAGWFLSKIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAISYIVTVFTGDIRGAGTKSKIYLVMYGARGSKNSGKIFLEGGVFDRGRTDIFHIELAVLLSPLSRVSIGHGNVGVNRGWYCEKVVILCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKKRLKKFPWSLWVWTTDLKKAGTNSLIFIQIYGQKGRTDEILLNPNNKWFKPGIIEKFRIELPDLGRFYKIRVWHDKRSPGSGWHLEKMTLMNTLTKDKYNFNCNRWLNANEDDNEIVREMTAEGPTVRRIMSMARYRVTVCTGELEGAGTDANVYLCLFGDAGDTGERLLYNCRNNTDLFEKGNADEFTIESVTLRKVRRVRIRHDGKGSGSGWFLERVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISLKTADVPGASTDSRVYIKLYGDKSDTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGTINRLVIGHDSTGLHASWFLGSVQIRVPRQGKQYTFPANRWLDKDQADGRLEVELYPSEVIDIQKLIHYEVEVWTGDVGGAGTTARVYMQIYGEEGKTEVLFLSSRSKVFDRASKDIFQTDTFTVYAIDLGALTKIRIRHDNSGNRPGWFLDRIDITDMNNEITYYFPCQRWLAVEEDDGQLSRELLPVDESYVLSPSEDEEGGGGGDNNPLNNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKGPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDSNIFIVIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNTGMNPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYSGDRSSNCSSPADFWEIALSSKMADIDVAMVTGPMADYVQEGPVIPYYVSVTTGKHKDAATDSRAFILLIGEDDERSNRIWLDYPQGKKGFSCGSVEEFYVAGLDVGVIKKIELGHDGASPESCWLVEELCLAVPTQGTKYTLRCSCWLAKDRGDGVTSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGNRPEWFLERILLKNMNTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLSKSVGDGQTVRDFACANNEIHDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYCSGWLVDKVEVTNTSTGVATIFTCGRWLDKKRGDGLTWRDLFPSV", "length": 2069, "header": "tr|I3LDH6-1|I3LDH6_PIG Isoform 1 of Lipoxygenase homology PLAT domains 1 OS=Sus scrofa OX=9823 GN=LOXHD1 PE=4 SV=2 CANONICAL=I3LDH6-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QF10-1", "url": "https://www.uniprot.org/uniprotkb/I3LDH6/entry#A0A5G2QF10-1", "sequence": { "sequence": "MNNEITYYFPCQRWLAVEEDDGQLSRELLPVDESYVLSPSEDEEGGGGGDNNPLNNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKGPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDSNIFIVIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNTGMNPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYSGDRSSNCSSPADFWEIALSSKMADIDVAMVTGPMADYVQEGPVIPYYVSVTTGKHKDAATDSRAFILLIGEDDERSNRIWLDYPQGKKGFSCGSVEEFYVAGLDVGVIKKIELGHDGASPESCWLVEELCLAVPTQGTKYTLRCSCWLAKDRGDGVTSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGNRPEWFLERILLKNMNTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLSKSVGDGQTVRDFACANNEIHDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELVVTRLRLAARHGW", "length": 1117, "header": "tr|A0A5G2QF10-1|I3LDH6_PIG Computationally mapped isoform of Lipoxygenase homology PLAT domains 1 OS=Sus scrofa OX=9823 GN=LOXHD1 PE=4 SV=1 CANONICAL=I3LDH6-1" }, "locus": { "chromosome": "1", "start_pos": 96166191, "end_pos": 96081095, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066996.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066996.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062300.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062300.1" } ] } }, { "isoform_ac": "A0A5G2R195-1", "url": "https://www.uniprot.org/uniprotkb/I3LDH6/entry#A0A5G2R195-1", "sequence": { "sequence": "MMPQKKKRRKKDIDFLALYEQELLNYASEDDEEELEHEYYKAKVYEVVTATGDVRGAGTDANVFITIFGENGLSPKLHLTSKSKSAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNASWYLDRVIVTDMKRPHLRYYFNCNNWLSNVEGDRQWCRDLLASFNPMDMPRGNKYEVKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFMLDAPDLGQLMKINVGHNNKGGSAGWFLSKIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAISYIVTVFTGDIRGAGTKSKIYLVMYGARGSKNSGKIFLEGGVFDRGRTDIFHIELAVLLSPLSRVSIGHGNVGVNRGWYCEKVVILCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKKRLKKFPWSLWVWTTDLKKAGTNSLIFIQIYGQKGRTDEILLNPNNKWFKPGIIEKFRIELPDLGRFYKIRVWHDKRSPGSGWHLEKMTLMNTLTKDKYNFNCNRWLNANEDDNEIVREMTAEGPTVRRIMSMARYRVTVCTGELEGAGTDANVYLCLFGDAGDTGERLLYNCRNNTDLFEKGNADEFTIESVTLRKVRRVRIRHDGKGSGSGWFLERVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISLKTADVPGASTDSRVYIKLYGDKSDTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGTINRLVIGHDSTGLHASWFLGSVQIRVPRQGKQYTFPANRWLDKDQADGRLEVELYPSEVIDIQKLIHYEVEVWTGDVGGAGTTARVYMQIYGEEGKTEVLFLSSRSKVFDRASKDIFQLEAADVGPVFKIRLGHTGEGFGPSWFVDTVWLRHMAVREADLTPEEEARKKKEKDKLRQLLRKERLKAKLQRKKKKKKKGSDEEDERDEDEESSSEESSSEEEEEETEEEEDEEEFGPGMQEVIEEYKFDAHRWLARGKEDNELVVELVPAGREGPEPNIYEVQVITGNVPKAGTDANVFLTIYGEEYGDTGERPLKKSDKSNKFEQGQTDTFTVYAIDLGALTKIRIRHDNSGNRPGWFLDRIDITDMNNEITYYFPCQRWLAVEEDDGQLSRELLPVDESYVLSPSEDEEGGGGGDNNPLNNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKGPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDSNIFIVIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNTGMNPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYSGDRSSNCSSPADFWEIALSSKMADIDVAMVTGPMADYVQEGPVIPYYVSVTTGKHKDAATDSRAFILLIGEDDERSNRIWLDYPQGKKGFSCGSVEEFYVAGLDVGVIKKIEVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGNRPEWFLERILLKNMNTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLSKSVGDGQTVRDFACANNEIHDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYCSGWLVDKVEVTNTSTGVATIFTCGRWLDKKRGDGLTWRDLFPSV", "length": 2216, "header": "tr|A0A5G2R195-1|I3LDH6_PIG Computationally mapped isoform of Lipoxygenase homology PLAT domains 1 OS=Sus scrofa OX=9823 GN=LOXHD1 PE=4 SV=1 CANONICAL=I3LDH6-1" }, "locus": { "chromosome": "1", "start_pos": 96276992, "end_pos": 96081396, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082610.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082610.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070883.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070883.1" } ] } }, { "isoform_ac": "A0A5G2R727-1", "url": "https://www.uniprot.org/uniprotkb/I3LDH6/entry#A0A5G2R727-1", "sequence": { "sequence": "MMPQKKKRRKKDIDFLALYEQELLNYASEDDEEELEHEYYKAKVYEVVTATGDVRGAGTDANVFITIFGENGLSPKLHLTSKSKSAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNASWYLDRVIVTDMKRPHLRYYFNCNNWLSNVEGDRQWCRDLLASFNPMDMPRGNKYEVKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFMLDAPDLGQLMKINVGHNNKGGSAGWFLSKIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAISYIVTVFTGDIRGAGTKSKIYLVMYGARGSKNSGKIFLEGGVFDRGRTDIFHIELAVLLSPLSRVSIGHGNVGVNRGWYCEKVVILCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKKRLKKFPWSLWVWTTDLKKAGTNSLIFIQIYGQKGRTDEILLNPNNKWFKPGIIEKFRIELPDLGRFYKIRVWHDKRSPGSGWHLEKMTLMNTLTKDKYNFNCNRWLNANEDDNEIVREMTAEGPTVRRIMSMARYRVTVCTGELEGAGTDANVYLCLFGDAGDTGERLLYNCRNNTDLFEKGNADEFTIESVTLRKVRRVRIRHDGKGSGSGWFLERVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISLKTADVPGASTDSRVYIKLYGDKSDTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGTINRLVIGHDSTGLHASWFLGSVQIRVPRQGKQYTFPANRWLDKDQADGRLEVELYPSEVIDIQKLIHYEVEVWTGDVGGAGTTARVYMQIYGEEGKTEVLFLSSRSKVFDRASKDIFQLEAADVGPVFKIRLGHTGEGFGPSWFVDTVWLRHMAVREADLTPEEEARKKKEKDKLRQLLRKERLKAKLQRKKKKKKKGSDEEDERDEDEESSSEESSSEEEEEETEEEEDEEEFGPGMQEVIEEYKFDAHRWLARGKEDNELVVELVPAGREGPEPNIYEVQVITGNVPKAGTDANVFLTIYGEEYGDTGERPLKKSDKSNKFEQGQTDTFTVYAIDLGALTKIRIRHDNSGNRPGWFLDRIDITDMNNEITYYFPCQRWLAVEEDDGQLSRELLPVDESYVLSPSEDEEGGGGGDNNPLNNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKGPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDSNIFIVIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNTGMNPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYSGDRSSNCSSPADFWEIALSSKMADIDVAMVTGPMADYVQEGPVIPYYVSVTTGKHKDAATDSRAFILLIGEDDERSNRIWLDYPQGKKGFSCGSVEEFYVAGLDVGVIKKIELGHDGASPESCWLVEELCLAVPTQGTKYTLRCSCWLAKDRGDGVTSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGNRPEWFLERILLKNMNTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLSKSVGDGQTVRDFACANNEIHDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYCSGWLVDKVEVTNTSTGVATIFTCGRWLDKKRGDGLTWRDLFPSV", "length": 2278, "header": "tr|A0A5G2R727-1|A0A5G2R727_PIG Computationally mapped isoform of Lipoxygenase homology PLAT domains 1 OS=Sus scrofa OX=9823 GN=LOXHD1 PE=4 SV=1 CANONICAL=I3LDH6-1" }, "locus": { "chromosome": "1", "start_pos": 96276992, "end_pos": 96081396, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000087847.2", "url": "https://www.ensembl.org/id/ENSSSCT00000087847.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066406.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066406.1" } ] } }, { "isoform_ac": "A0A8W4FNC7-1", "url": "https://www.uniprot.org/uniprotkb/I3LDH6/entry#A0A8W4FNC7-1", "sequence": { "sequence": "MTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKGPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDSNIFIVIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNTGMNPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYSGDRSSNCSSPADFWEIALSSKMADIDVAMVTGPMADYVQEGPVIPYYVSVTTGKHKDAATDSRAFILLIGEDDERSNRIWLDYPQGKKGFSCGSVEEFYVAGLDVGVIKKIELGHDGASPESCWLVEELCLAVPTQGTKYTLRCSCWLAKDRGDGVTSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGNRPEWFLERILLKNMNTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLSKSVGDGQTVRDFACANNEIHDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYCSGWLVDKVEVTNTSTGVATIFTCGRWLDKKRGDGLTWRDLFPSV", "length": 1066, "header": "tr|A0A8W4FNC7-1|A0A8W4FNC7_PIG Computationally mapped isoform of Lipoxygenase homology PLAT domains 1 OS=Sus scrofa OX=9823 GN=LOXHD1 PE=4 SV=1 CANONICAL=I3LDH6-1" }, "locus": { "chromosome": "1", "start_pos": 96155945, "end_pos": 96081396, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000102652.1", "url": "https://www.ensembl.org/id/ENSSSCT00000102652.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000080849.1", "url": "https://www.ensembl.org/id/ENSSSCP00000080849.1" } ] } }, { "isoform_ac": "I3LDH6-1", "url": "https://www.uniprot.org/uniprotkb/I3LDH6/entry#I3LDH6-1", "sequence": { "sequence": "MMPQKKKRRKKDIDFLALYEQELLNYASEDDEEELEHEYYKAKVYEVVTATGDVRGAGTDANVFITIFGENGLSPKLHLTSKSKSAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNASWYLDRVIVTDMKRPHLRYYFNCNNWLSNVEGDRQWCRDLLASFNPMDMPRGNKYEVKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFMLDAPDLGQLMKINVGHNNKGGSAGWFLSKIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAISYIVTVFTGDIRGAGTKSKIYLVMYGARGSKNSGKIFLEGGVFDRGRTDIFHIELAVLLSPLSRVSIGHGNVGVNRGWYCEKVVILCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKKRLKKFPWSLWVWTTDLKKAGTNSLIFIQIYGQKGRTDEILLNPNNKWFKPGIIEKFRIELPDLGRFYKIRVWHDKRSPGSGWHLEKMTLMNTLTKDKYNFNCNRWLNANEDDNEIVREMTAEGPTVRRIMSMARYRVTVCTGELEGAGTDANVYLCLFGDAGDTGERLLYNCRNNTDLFEKGNADEFTIESVTLRKVRRVRIRHDGKGSGSGWFLERVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISLKTADVPGASTDSRVYIKLYGDKSDTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGTINRLVIGHDSTGLHASWFLGSVQIRVPRQGKQYTFPANRWLDKDQADGRLEVELYPSEVIDIQKLIHYEVEVWTGDVGGAGTTARVYMQIYGEEGKTEVLFLSSRSKVFDRASKDIFQTDTFTVYAIDLGALTKIRIRHDNSGNRPGWFLDRIDITDMNNEITYYFPCQRWLAVEEDDGQLSRELLPVDESYVLSPSEDEEGGGGGDNNPLNNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKGPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGAIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDSNIFIVIYGCDAVCTQQKYLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNTGMNPGWHCSHVDIRRLLPDKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYSGDRSSNCSSPADFWEIALSSKMADIDVAMVTGPMADYVQEGPVIPYYVSVTTGKHKDAATDSRAFILLIGEDDERSNRIWLDYPQGKKGFSCGSVEEFYVAGLDVGVIKKIELGHDGASPESCWLVEELCLAVPTQGTKYTLRCSCWLAKDRGDGVTSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGNRPEWFLERILLKNMNTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLSKSVGDGQTVRDFACANNEIHDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYCSGWLVDKVEVTNTSTGVATIFTCGRWLDKKRGDGLTWRDLFPSV", "length": 2069, "header": "tr|I3LDH6-1|I3LDH6_PIG Isoform 1 of Lipoxygenase homology PLAT domains 1 OS=Sus scrofa OX=9823 GN=LOXHD1 PE=4 SV=2 CANONICAL=I3LDH6-1" }, "locus": { "chromosome": "1", "start_pos": 96276992, "end_pos": 96081396, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000032272.4", "url": "https://www.ensembl.org/id/ENSSSCT00000032272.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022107.2", "url": "https://www.ensembl.org/id/ENSSSCP00000022107.2" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 1430, "start_aa": "Thr", "end_pos": 1430, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr1430", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 545, "start_aa": "Thr", "end_pos": 545, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr545", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] }, { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 558, "start_aa": "Thr", "end_pos": 558, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr558", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QF10", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QF10" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100519879", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100519879", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I6ANZ5-1", "protein_name": "Lipoxygenase homology PLAT domains 1", "gene_name": "Loxhd1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MMPQKKKRRKKDIDFLGLYEEELLNYNSEDDEDELEHEYYKAKVYEVVTATGDVRGAGTDANVFITIFGENGLSPKLHLTSKSESAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNASWYLDRVIVTDMKRPHLRYYFNCNNWLSKVEGDRQWCRDLLASFDPMDMPRGNKYEIKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFTLDAPDLGQLMKINVGHNNKGGSAGWFLSKIIIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAITYIVTVFTGDIRGAGTKSKIYLVMYGARGNRNSGKIFLEGGVFDRGRTDIFHIDLAVLLSPLSRVSIGHGNIGVNRGWYCEKVVVLCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKKRLKKFPWSLWVWTTDLKKAGTNSPIFIQIYGKKGRTDEILLNPNNKWFKPGIIEKFRMELPDLGRFYKIRAWHDRQNPGSGWHLEKMTLMNTLNKDKYNFNCNRWLDANEDDNEIVREMTAEGPTVRRIMGMARYRVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRNNTDLFEKGNADEFTIESVTMRKVRRVRVRHDGKGSGSGWYLDRVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISVKTGDVSGASTDSRVYIKLYGEKSDTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGTIIRLVIGHDSTGMHAGWFLGSVQIRVPRQGKQYTFPANRWLDKNQADGRLEVELYPSEVVEIQKLVHYEIEIWTGDVGGAGTTSRVYVQIYGEEGKTEVLFLSSRSKVFDRGSKDIFQTDTFTIYAIDLGALTKIRIRHDNTGNRPGWFLDRIDITDVNNETTYYFPCQRWLAVEEDDGQLSRELLPVDESYVLPSEDEEGGGQGDNNPLDNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLFGTKDNNGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKAPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGSIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDANVFIVIYGCDAVCTRQKFLCTNKREQKLLFERKSASRFIVELEDVGEIIEKIRIGHDNTGINPGWHCSHVDIRRLLPEKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFEKGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEIALSSKMADVDIDTVTGPMVDYVQDGPVIPYYVSVTTGKHKEAATDSRAFVLLIGEDDERTNRIWLDFPQGKRGFSCGSVEEFYVGGLDVGIIKKIELGHDGASPESCWLVEELCLAVPTQGTKYTLRCNCWLAKDRGDGVTSRVFDLLDAMVVNIGKKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGSRPEWFLERILLKNMNTGDLTMFYYGDWLSQKKGKKTLVCEICAVIDGEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYIDVKDNSRDETFRFQCDCWLSKSEGDRQTLRDFACANNEIRDELEETTYEIVIETGNGGETRENIWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIFLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKIQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYYSGWLVEKVEVTNTSTGVATIFSCGRWLDKSRGDGLTWRELFPSV", "length": 2068 }, "evidence": [ { "id": "I3LDH6", "url": "https://omabrowser.org/oma/group/I3LDH6/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "C8YR32-1", "protein_name": "Lipoxygenase homology domain-containing protein 1", "gene_name": "Loxhd1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MMAQKKKRRKKDIDFLGLYEEELLNYDSEDGEDELEHEYYKAKVYEVVTATGDVRGAGTDANVFITLFGENGLSPKLHLTSKSESAFEKANVDVFRVRTNNVGLIYKIRIEHDNTGLNASWYLDRVIVTDMKRPHLRYYFNCNNWLSKVEGDRQWCRDLLASFDPMDMPRGNKYEIKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDKFTLDAPDLGQLMKINVGHNNKGGSAGWFLSKIIIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAITYIVTVFTGDIRGAGTKSKIYLVMYGARGNKNSGKIFLEGGVFDRGRTDIFHIDLAVLLSPLSRVSIGHGNIGVNRGWYCEKVVILCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKKRLKKYPWSLWVWTTDLKKAGTNSPIFIQIYGKKGRTDEILLNPNNKWFKPGIIEKFRMELPDLGRFYKIRAWHDRQNPGSGWHLEKMTLMNTINKDKYNFNCNRWLDANEDDNEIVREMTAEGPTVRRIMGMARYRVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRNNTDLFEKGNADEFTIESVTMRKVRRVRVRHDGKGSGSGWYLDRVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSNATLKNFRYHISVKTGDVSGASTDSRVYIKLYGEKSDTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGTINRLVIGHDSTGMHAGWFLGSVQIRVPRQGKQYTFPANRWLDKNQADGRLEVELYPSEVVEIQKLVHYEIEIWTGDVGGAGTTSRVFVQIYGEEGKTEVLFLSSRSKVFDRGSKDIFQTDTFTIYAIDLGALTKIRIRHDNTGNRPGWFLDRVDITDVNNETTYYFPCQRWLAVEEDDGQLSRELLPVDESYVLPSEDEEGGGQGDNNPLDNLALEQKDKSTTFSVTIKTGDKKNAGTDANVFITLFGTQDNNGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRIGHDNTGKAPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGSIVRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDANIFIVIYGCDAVCTRQKFLCTNKREQKLFFERKSASRFIVELEDVGEIIEKIRIGHDNTGINPGWHCSHVDIRRLLPEKDGTETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNVPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFEKGTADTFIIEAADLGVIYKIKLRHDNTKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEIALSSKMADVDIDTVTGPMVDYVQDGPVIPYYVSVTTGKHKEAATDSRAFVLLIGEDDECTNRIWLDYPQGKRGFSCGSVEEFYVGGLDVGIIKKIELGHDGASPESCWLVEELCLAVPTQGTKYTLRCNCWLAKDRGDGVTSRVFDLLDAMVVNIGKKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEVQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGMGSRPEWFLERILLKNMNTGDLTMFYYGDWLSQKKGKKTLVCEICAVIDGEEMMEWTSYTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFSDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFRFQCDCWLSKSEGDRQTLRDFACANNEIRDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLVENSSRQRAFRKGTTDTFEFDSIFLGDIASLCVGHLAREDRFIPKRELVWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKIQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYYSGWLVEKVEVTNTSTGVATIFSCGRWLDKSRGDGLTWRELFPSV", "length": 2068 }, "evidence": [ { "id": "I3LDH6", "url": "https://omabrowser.org/oma/group/I3LDH6/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IVV2-1", "protein_name": "Lipoxygenase homology domain-containing protein 1", "gene_name": "LOXHD1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MMPQKKRRRKKDIDFLALYEAELLNYASEDDEGELEHEYYKARVYEVVTATGDVRGAGTDANVFITLFGENGLSPKLQLTSKSKSAFEKGNVDVFRVRTNNVGLIYKVRIEHDNTGLNASWYLDHVIVTDMKRPHLRYYFNCNNWLSKVEGDRQWCRDLLASFNPMDMPRGNKYEVKVYTGDVIGAGTDADVFINIFGEYGDTGERRLENEKDNFEKGAEDRFILDAPDLGQLMKINVGHNNKGGSAGWFLSQIVIEDIGNKRKYDFPLNRWLALDEDDGKIQRDILVGGAETTAITYIVTVFTGDVRGAGTKSKIYLVMYGARGNKNSGKIFLEGGVFDRGRTDIFHIELAVLLSPLSRVSVGHGNVGVNRGWFCEKVVILCPFTGIQQTFPCSNWLDEKKADGLIERQLYEMVSLRKKRLKKFPWSLWVWTTDLKKAGTNSPIFIQIYGQKGRTDEILLNPNNKWFKPGIIEKFRIELPDLGRFYKIRVWHDKRSSGSGWHLERMTLMNTLNKDKYNFNCNRWLDANEDDNEIVREMTAEGPTVRRIMGMARYHVTVCTGELEGAGTDANVYLCLFGDVGDTGERLLYNCRNNTDLFEKGNADEFTIESVTMRNVRRVRIRHDGKGSGSGWYLDRVLVREEGQPESDNVEFPCLRWLDKDKDDGQLVRELLPSDSSATLKNFRYHISLKTGDVSGASTDSRVYIKLYGDKSDTIKQVLLVSDNNLKDYFERGRVDEFTLETLNIGNINRLVIGHDSTGMHASWFLGSVQIRVPRQGKQYTFPANRWLDKNQADGRLEVELYPSEVVEIQKLVHYEVEIWTGDVGGAGTSARVYMQIYGEKGKTEVLFLSSRSKVFERASKDTFQTDTFTIYAIDLGALTKIRIRHDNTGNRAGWFLDRIDITDMNNEITYYFPCQRWLAVEEDDGQLSRELLPVDESYVLPQSEEGRGGGDNNPLDNLALEQKDKSTTFSVTIKTGVKKNAGTDANVFITLFGTQDDTGMTLLKSSKTNSDKFERDSIEIFTVETLDLGDLWKVRLGHDNTGKAPGWFVDWVEVDAPSLGKCMTFPCGRWLAKNEDDGSIIRDLFHAELQTRLYTPFVPYEITLYTSDVFAAGTDANIFIIIYGCDAVCTQQKYLCTNKREQKQFFERKSASRFIVELEDVGEIIEKIRIGHNNTGMNPGWHCSHVDIRRLLPDKDGAETLTFPCDRWLATSEDDKKTIRELVPYDIFTEKYMKDGSLRQVYKEVEEPLDIVLYSVQIFTGNIPGAGTDAKVYITIYGDLGDTGERYLGKSENRTNKFERGTADTFIIEAADLGVIYKIKLRHDNSKWCADWYVEKVEIWNDTNEDEFLFLCGRWLSLKKEDGRLERLFYEKEYTGDRSSNCSSPADFWEIALSSKMADVDISTVTGPMADYVQEGPIIPYYVSVTTGKHKDAATDSRAFIFLIGEDDERSKRIWLDYPRGKRGFSRGSVEEFYVAGLDVGIIKKIELGHDGASPESCWLVEELCLAVPTQGTKYMLNCNCWLAKDRGDGITSRVFDLLDAMVVNIGVKVLYEMTVWTGDVVGGGTDSNIFMTLYGINGSTEEMQLDKKKARFEREQNDTFIMEILDIAPFTKMRIRIDGLGSRPEWFLERILLKNMNTGDLTMFYYGDWLSQRKGKKTLVCEMCAVIDEEEMMEWTSYTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQSANWNKFERNNTDTFNFPDMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFHFQCDCWLSKSEGDGQTVRDFACANNKICDELEETTYEIVIETGNGGETRENVWLILEGRKNRSKEFLMENSSRQRAFRKGTTDTFEFDSIYLGDIASLCVGHLAREDRFIPKRELAWHVKTITITEMEYGNVYFFNCDCLIPLKRKRKYFKVFEVTKTTESFASKVQSLVPVKYEVIVTTGYEPGAGTDANVFVTIFGANGDTGKRELKQKMRNLFERGSTDRFFLETLELGELRKVRLEHDSSGYCSGWLVEKVEVTNTSTGVATIFNCGRWLDKKRGDGLTWRDLFPSV", "length": 2067 }, "evidence": [ { "id": "I3LDH6", "url": "https://omabrowser.org/oma/group/I3LDH6/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "sensory perception of sound", "id": "GO:0007605", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007605", "evidence": [ { "database": "UniProtKB", "id": "I3LDH6", "url": "https://www.uniprot.org/uniprotkb/I3LDH6" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "stereocilium", "id": "GO:0032420", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0032420", "evidence": [ { "database": "UniProtKB", "id": "I3LDH6", "url": "https://www.uniprot.org/uniprotkb/I3LDH6" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 118, "end_pos": 120, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1297, "end_pos": 1299, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1345, "end_pos": 1347, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1385, "end_pos": 1387, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1582, "end_pos": 1584, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1602, "end_pos": 1604, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1729, "end_pos": 1731, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1839, "end_pos": 1841, "annotation": "n_glycosylation_sequon" }, { "start_pos": 1848, "end_pos": 1850, "annotation": "n_glycosylation_sequon" }, { "start_pos": 2037, "end_pos": 2039, "annotation": "n_glycosylation_sequon" }, { "start_pos": 594, "end_pos": 596, "annotation": "n_glycosylation_sequon" }, { "start_pos": 678, "end_pos": 680, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LDH6", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LDH6" }, { "id": "PS50095", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50095" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PLAT", "eco_id": "ECO_0000259", "start_pos": 43, "end_pos": 160, "start_aa": "Lys", "end_aa": "Leu", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 545, 558, 1430 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 118, "end_pos": 120 }, { "start_pos": 1297, "end_pos": 1299 }, { "start_pos": 1345, "end_pos": 1347 }, { "start_pos": 1385, "end_pos": 1387 }, { "start_pos": 1582, "end_pos": 1584 }, { "start_pos": 1602, "end_pos": 1604 }, { "start_pos": 1729, "end_pos": 1731 }, { "start_pos": 1839, "end_pos": 1841 }, { "start_pos": 1848, "end_pos": 1850 }, { "start_pos": 2037, "end_pos": 2039 }, { "start_pos": 594, "end_pos": 596 }, { "start_pos": 678, "end_pos": 680 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LQN1-1", "uniprot_ac": "I3LQN1", "uniprot_id": "I3LQN1_PIG", "mass": { "chemical_mass": 23830.0, "monoisotopic_mass": 23830.0 }, "refseq": { "ac": "XP_020925178", "name": "ras-related protein M-Ras isoform X2", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925178" }, "gene_names": [ { "name": "MRAS", "type": "recommended", "evidence": [ { "id": "I3LQN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ] }, { "name": "MRAS", "type": "synonym", "evidence": [ { "id": "XP_020925178", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925178" } ] } ], "protein_names": [ { "name": "Muscle RAS onco homolog", "type": "synonym", "evidence": [ { "id": "I3LQN1", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQN1/entry#names_and_taxonomy" } ] }, { "name": "ras-related protein M-Ras isoform X2", "type": "synonym", "evidence": [ { "id": "XP_020925178", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925178" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "MRAS", "url": "https://www.uniprot.org/uniprotkb/I3LQN1", "locus": { "chromosome": "13", "start_pos": 79211135, "end_pos": 79139764, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000027443", "url": "https://www.ensembl.org/id/ENSSSCG00000027443" } ] } } ], "crossref": [ { "id": "ENSSSCG00000027443", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000027443", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd04145", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04145", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100621398", "url": "https://www.ncbi.nlm.nih.gov/gene/100621398", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001806", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001806", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR005225", "url": "https://www.ebi.ac.uk/interpro/entry/IPR005225", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR020849", "url": "https://www.ebi.ac.uk/interpro/entry/IPR020849", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR027417", "url": "https://www.ebi.ac.uk/interpro/entry/IPR027417", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "DRDVYPM", "url": "https://omabrowser.org/oma/group/DRDVYPM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "PTHR24070", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR24070", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00071", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00071", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-5673000", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5673000", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "XP_020925178", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020925178", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QJB5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJB5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJB5-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJB5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPA8", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPA8", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4FPA8-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4FPA8-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVFSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL", "length": 208, "header": "tr|I3LQN1-1|I3LQN1_PIG Isoform 1 of Muscle RAS onco homolog OS=Sus scrofa OX=9823 GN=MRAS PE=1 SV=1 CANONICAL=I3LQN1-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJB5-1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1/entry#A0A5G2QJB5-1", "sequence": { "sequence": "MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVFSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLSWWLCRFFELHSVGLMWKCFSTHKTSHDQAPPTRPCPQSTVSELGCLW", "length": 210, "header": "tr|A0A5G2QJB5-1|I3LQN1_PIG Computationally mapped isoform of Muscle RAS onco homolog OS=Sus scrofa OX=9823 GN=MRAS PE=1 SV=1 CANONICAL=I3LQN1-1" }, "locus": { "chromosome": "13", "start_pos": 79208306, "end_pos": 79165408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088478.1", "url": "https://www.ensembl.org/id/ENSSSCT00000088478.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000062120.1", "url": "https://www.ensembl.org/id/ENSSSCP00000062120.1" } ] } }, { "isoform_ac": "A0A8W4FPA8-1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1/entry#A0A8W4FPA8-1", "sequence": { "sequence": "MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVFSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNPPSPCADATRSPLSWWLCRFFELHSVGLMWKCFSTHKTSHDQAPPTRPCPQSTVSELGCLW", "length": 210, "header": "tr|A0A8W4FPA8-1|A0A8W4FPA8_PIG Computationally mapped isoform of Muscle RAS onco homolog OS=Sus scrofa OX=9823 GN=MRAS PE=1 SV=1 CANONICAL=I3LQN1-1" }, "locus": { "chromosome": "13", "start_pos": 79208306, "end_pos": 79165408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000103529.1", "url": "https://www.ensembl.org/id/ENSSSCT00000103529.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000081319.1", "url": "https://www.ensembl.org/id/ENSSSCP00000081319.1" } ] } }, { "isoform_ac": "I3LQN1-1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1/entry#I3LQN1-1", "sequence": { "sequence": "MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVFSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL", "length": 208, "header": "tr|I3LQN1-1|I3LQN1_PIG Isoform 1 of Muscle RAS onco homolog OS=Sus scrofa OX=9823 GN=MRAS PE=1 SV=1 CANONICAL=I3LQN1-1" }, "locus": { "chromosome": "13", "start_pos": 79207892, "end_pos": 79165408, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000026073.4", "url": "https://www.ensembl.org/id/ENSSSCT00000026073.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026411.1", "url": "https://www.ensembl.org/id/ENSSSCP00000026411.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJB5", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJB5" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "R-SSC-5673000", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-5673000", "resource": "Reactome", "description": "RAF activation" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8C2MJZ1-1", "protein_name": "Ras-related protein M-Ras isoform X1", "gene_name": "Mras", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEKSQKKKKKTKWRGDRATSTHKLQCVIL", "length": 208 }, "evidence": [ { "id": "I3LQN1", "url": "https://omabrowser.org/oma/group/I3LQN1/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O08989-1", "protein_name": "Ras-related protein M-Ras", "gene_name": "Mras", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MATSAVPSENLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPEKNQKKKKKTKWRGDRATGTHKLQCVIL", "length": 208 }, "evidence": [ { "id": "I3LQN1", "url": "https://omabrowser.org/oma/group/I3LQN1/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "O14807-1", "protein_name": "Ras-related protein M-Ras", "gene_name": "MRAS", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNIPYIETSAKDPPLNVDKAFHDLVRVIRQQIPEKSQKKKKKTKWRGDRATGTHKLQCVIL", "length": 208 }, "evidence": [ { "id": "I3LQN1", "url": "https://omabrowser.org/oma/group/I3LQN1/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P32253-1", "protein_name": "Ras-like protein rasC", "gene_name": "rasC", "tax_id": 44689, "organism": "Dictyostelium discoideum", "sequence": { "sequence": "MSKLLKLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSYRKQVNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADLPDKDRKVPPMEGKELAKSFGAPFLETSAKSRVNVEEAFFTLVREIKRWNQNPQNEEMLPPKKRGCIIL", "length": 189 }, "evidence": [ { "id": "I3LQN1", "url": "https://omabrowser.org/oma/group/I3LQN1/", "database": "OMA" } ], "glygen_name": "Cellular slime mold", "common_name": "Social amoeba" }, { "uniprot_canonical_ac": "P97538-1", "protein_name": "Ras-related protein M-Ras", "gene_name": "Mras", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQVPEKNQKKKKKTKWRGDRATGTHKLQCVIL", "length": 208 }, "evidence": [ { "id": "I3LQN1", "url": "https://omabrowser.org/oma/group/I3LQN1/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "protein phosphatase type 1 complex", "id": "GO:0000164", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0000164", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" }, { "name": "plasma membrane", "id": "GO:0005886", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005886", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 3, "go_terms": [ { "name": "GTPase activity", "id": "GO:0003924", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003924", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" }, { "name": "GTP binding", "id": "GO:0005525", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005525", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" }, { "name": "GTP-dependent protein binding", "id": "GO:0030742", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030742", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 3, "go_terms": [ { "name": "Ras protein signal transduction", "id": "GO:0007265", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007265", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" }, { "name": "establishment or maintenance of cell polarity", "id": "GO:0007163", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007163", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" }, { "name": "signal transduction", "id": "GO:0007165", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007165", "evidence": [ { "database": "UniProtKB", "id": "I3LQN1", "url": "https://www.uniprot.org/uniprotkb/I3LQN1" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], 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"total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LE25-1", "uniprot_ac": "I3LE25", "uniprot_id": "I3LE25_PIG", "mass": { "chemical_mass": 61012.0, "monoisotopic_mass": 61012.0 }, "refseq": { "ac": "NP_001231174", "name": "acetyl-coenzyme A transporter 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231174" }, "gene_names": [ { "name": "SLC33A1", "type": "recommended", "evidence": [ { "id": "I3LE25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE25" } ] }, { "name": "SLC33A1", "type": "synonym", "evidence": [ { "id": "NP_001231174", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231174" } ] } ], "protein_names": [ { "name": "Acetyl-coenzyme A transporter 1", "type": "recommended", "evidence": [ { "id": "I3LE25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE25/entry#names_and_taxonomy" } ] }, { "name": "Solute carrier family 33 member 1", "type": "synonym", "evidence": [ { "id": "I3LE25", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LE25/entry#names_and_taxonomy" } ] }, { "name": "acetyl-coenzyme A transporter 1", "type": "synonym", "evidence": [ { "id": "NP_001231174", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231174" } ] }, { "name": "solute carrier family 33 (acetyl-CoA transporter), member 1", "type": "synonym", "evidence": [ { "id": "NP_001231174", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231174" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LE25", "url": "https://www.uniprot.org/uniprotkb/I3LE25" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "SLC33A1", "url": "https://www.uniprot.org/uniprotkb/I3LE25", "locus": { "chromosome": "13", "start_pos": 95658530, "end_pos": 95724156, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025316", "url": "https://www.ensembl.org/id/ENSSSCG00000025316" } ] } } ], "crossref": [ { "id": "ENSSSCG00000025316", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025316", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100625667", "url": "https://www.ncbi.nlm.nih.gov/gene/100625667", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR004752", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004752", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR024371", "url": "https://www.ebi.ac.uk/interpro/entry/IPR024371", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035437", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035437", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036259", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036259", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625667", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625667", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "RRKSWIM", "url": "https://omabrowser.org/oma/group/RRKSWIM/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LE25", "url": "https://www.orthodb.org/?gene=I3LE25", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR12778", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12778", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR12778:SF9", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR12778:SF9", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF13000", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF13000", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-425397", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-425397", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "NP_001231174", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001231174", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "75039", "url": "https://www.rhea-db.org/rhea/75039", "database": "Rhea", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QJB7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJB7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QJB7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJB7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE25", "url": "https://www.uniprot.org/uniprotkb/I3LE25", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE25-1", "url": "https://www.uniprot.org/uniprotkb/I3LE25-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE73", "url": "https://www.uniprot.org/uniprotkb/I3LE73", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LE73-1", "url": "https://www.uniprot.org/uniprotkb/I3LE73-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MSPTISHKDNSRQRRPGTFNHSLDMKSGPLPPGSWDDDHPELVGGEGDKEALLGDIGASDLSKPPRSCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYFRNFGRRKSWLVPTQYILGFFMIYLSTQVDHLLGSTDGRSPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRLQPRPRGIVTLSDFLFFWGTVFLITTTLVALLKKENKEVLVGKEETQGITDTYKLLFSIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISRYTAGPQPLNIFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPMYYYVIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESVICVFIGFGWWFLLGPKLKKLQDEGPSSWKCKRSK", "length": 550, "header": "tr|I3LE25-1|I3LE25_PIG Isoform 1 of Acetyl-coenzyme A transporter 1 OS=Sus scrofa OX=9823 GN=SLC33A1 PE=1 SV=1 CANONICAL=I3LE25-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QJB7-1", "url": "https://www.uniprot.org/uniprotkb/I3LE25/entry#A0A5G2QJB7-1", "sequence": { "sequence": "MSPTISHKDNSRQRRPGTFNHSLDMKSGPLPPGSWDDDHPELVGGEGDKEALLGDIGASDLSKPPRSCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYFRNFGRRKSWLVPTQYILGFFMIYLSTQVDHLLGSTDGRSPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRLQPRPRGIVTLSDWFFSSRCSNRTEIGRRGSAQRTFSLIGSSNGSFANNITSDYQQIHCRSPATKHILQSHALQVTLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESVICVFIGFGWWFLLGPKLKKLQDEGPSSWKCKRSK", "length": 447, "header": "tr|A0A5G2QJB7-1|I3LE25_PIG Computationally mapped isoform of Acetyl-coenzyme A transporter 1 OS=Sus scrofa OX=9823 GN=SLC33A1 PE=1 SV=1 CANONICAL=I3LE25-1" }, "locus": { "chromosome": "13", "start_pos": 95723735, "end_pos": 95696518, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000083252.2", "url": "https://www.ensembl.org/id/ENSSSCT00000083252.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064557.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064557.1" } ] } }, { "isoform_ac": "I3LE25-1", "url": "https://www.uniprot.org/uniprotkb/I3LE25/entry#I3LE25-1", "sequence": { "sequence": "MSPTISHKDNSRQRRPGTFNHSLDMKSGPLPPGSWDDDHPELVGGEGDKEALLGDIGASDLSKPPRSCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYFRNFGRRKSWLVPTQYILGFFMIYLSTQVDHLLGSTDGRSPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRLQPRPRGIVTLSDFLFFWGTVFLITTTLVALLKKENKEVLVGKEETQGITDTYKLLFSIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISRYTAGPQPLNIFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPMYYYVIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESVICVFIGFGWWFLLGPKLKKLQDEGPSSWKCKRSK", "length": 550, "header": "tr|I3LE25-1|I3LE25_PIG Isoform 1 of Acetyl-coenzyme A transporter 1 OS=Sus scrofa OX=9823 GN=SLC33A1 PE=1 SV=1 CANONICAL=I3LE25-1" }, "locus": { "chromosome": "13", "start_pos": 95723735, "end_pos": 95696518, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000027200.3", "url": "https://www.ensembl.org/id/ENSSSCT00000027200.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022310.1", "url": "https://www.ensembl.org/id/ENSSSCP00000022310.1" } ] } }, { "isoform_ac": "I3LE73-1", "url": "https://www.uniprot.org/uniprotkb/I3LE25/entry#I3LE73-1", "sequence": { "sequence": "MSPTISHKDNSRQRRPGTFNHSLDMKSGPLPPGSWDDDHPELVGGEGDKEALLGDIGASDLSKPPRSCRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYFRNFGRRKSWLVPTQYILGFFMIYLSTQVDHLLGSTDGRSPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRLQPRPRGIVTLSDFLFFWGTVFLITTTLVALLKKENKEVLVGKEETQGITDTYKLLFSIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISRYTAGPQPLNIFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPMYYYVIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVENISTVMAIAGVMLLLRSVRLTSKFTSSSDIPVEFIRRNVKLRGRLRRITENGLEIEHIPITLPVISSWRKEPCGVLLVKLAGVELTEMGKVWLQKELKPSQVLWFQLLGKENSALFCYLLVNKGRYFSVSLNEEILRRGLGKTVLVKGLNHDSKIYWRIHRNLLKAELTALKKGEGIWKEESEKESYLERFKGSWREIWKKDNYLKKVGSDFNLKKESYYDKFRRTYEAWKENVNNYSLLLKFRELMSRVHFRRKG", "length": 751, "header": "tr|I3LE73-1|I3LE73_PIG Computationally mapped isoform of Acetyl-coenzyme A transporter 1 OS=Sus scrofa OX=9823 GN=SLC33A1 PE=1 SV=3 CANONICAL=I3LE25-1" }, "locus": { "chromosome": "13", "start_pos": 95723735, "end_pos": 95659000, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000028285.4", "url": "https://www.ensembl.org/id/ENSSSCT00000028285.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000022359.3", "url": "https://www.ensembl.org/id/ENSSSCP00000022359.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJB7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJB7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625667", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625667", "resource": "KEGG Pathway" }, { "id": "R-SSC-425397", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-425397", "resource": "Reactome", "description": "Transport of vitamins, nucleosides, and related molecules" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A4D6K3L8-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "Dmel\\CG9706", "tax_id": 7227, "organism": "Drosophila melanogaster", "sequence": { "sequence": "MSAIRRKPTGSNADQELLIDEPPKSEKVAEHQKPDIRGDRRNIAILLFLYVLQGIPIGLIAAIPMLLQNRGASYKQQAEFSFAYWPFSLKLLWAPIVDSLYIRRFGRRKSWLVPVQYLLGAFMLLLSLHVDRWLGGNGVDPNVPLLTLLFFLLNFLAATQDIAVDGWALTMLKRCNVGYASTCNSVGQTAGYFLGYVVFIALESKDFCNTYIRDVPLEDGMITLPRFLWFWGITFVVATTLVAIFKKENDIEDAHMDARYTEEHELNIHESYKILWDMVCMRPVQILAVILLTVKVTFAASDAVTSLKLIDAGVPKDKLALLAIPLIPLQLILPLAVGRYTNGPRPMDVYLKAIPYRIIMATVATGLAYITPYIVRGGAVPAYYYVLLITSYAIYQVFLYSMFVAAMAFFAKISDPAVGGTYMTFLNTLCNLGGNWPNTVVLWLVDVLTWKQCSNNAENTCQGKEEQQSCEASAGKCEITFDGYYLESGICVLYGIVWLLLVRKWIVYLQDLPVRSWLVVKQKSRXQSIV", "length": 530 }, "evidence": [ { "id": "I3LE25", "url": "https://omabrowser.org/oma/group/I3LE25/", "database": "OMA" } ], "glygen_name": "Fruit fly", "common_name": "Fruit fly" }, { "uniprot_canonical_ac": "A0A8V0X6L4-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "SLC33A1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MSPAIAAKEGGRQRRPGSHHHCLDVRSEVPPALALCGDGPAGGEAEALLPPEPETPTARGPRGCRAELGSVLLLLALYVLQGIPLGLAGSVPLILQSKNASYTEQAFFSFVFWPFSLKLLWAPLVDAVYLRRFGRRKSWLVPTQYVLGLFMIYLSTQVDLLLGDGQGRGPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESASFCNKYLRFQPQPRGIVTLSDFLFFWGAVFLITTTLVALLKKENKELTPTKEETKGITDTYKLLFSIIKMPAVLTFCLLILTAKVGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPFRLLLGLEFAFLVWWTPRVRHEGGFPIYYYVVVLLSYALHQISLYSMYVAIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTIKECIGAPEQACGNALEAELCTKAGGSCVTTLDGYYVESVICVILGFGWWFLLGPKFKKLQDEGQSSWKCKRTN", "length": 546 }, "evidence": [ { "id": "I3LE25", "url": "https://omabrowser.org/oma/group/I3LE25/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "G3H231-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "Slc33a1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MSPTISHKDSSRQRRPGMFSHALDMKSGPLPPGAWDDSHSDLVGGEGDREALLGDAGASDFPKAPRSYRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYFKNFGRRKSWLVPTQYILGIFMIYLSTQVDHLLGNTDDRTPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENKEVSTVKEETQGITDTYKLLFAIIKMPAVLAFCLLILTSKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNIFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAIELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGPSSWKCKRNN", "length": 550 }, "evidence": [ { "id": "I3LE25", "url": "https://omabrowser.org/oma/group/I3LE25/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "O00400-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "SLC33A1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIVVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN", "length": 549 }, "evidence": [ { "id": "I3LE25", "url": "https://omabrowser.org/oma/group/I3LE25/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "P38318-1", "protein_name": "Uncharacterized membrane protein YBR220C", "gene_name": "", "tax_id": 559292, "organism": "Saccharomyces cerevisiae S288C", "sequence": { "sequence": "MEPKRKSGSLAKHDLPQFYLLIMLYLAQGIPVGLAFGTVPFLLKSLAKETSFTSLGIFSMATYPYSLKIIWSPIVDSLYNKRIGRRRSWIIPVQFVSGFVLWALGWCISQGIIFDGVDDAFHNRGNGTLHSVSIKNLTWWFGLLVFLCATQDIAVDGWALTILSKESLSYASTAQTIGLNIGYFMSFTIFLSLNSSDFANKYFRNIPLDHGFISLGGYMKFSGMLYIVITIYIIFCTKEKPYVEYLPKVEPINTSDGGSKPISIEYDDGDVVSTQNTSSIKYIYRCFIKVLKLKSVRSLAFIHMISKFAFQCNEAATNLKLLEQGFKREDLAVTVLIDLPFEIIFGYYVVKWSSDKDPMIRDNRRLRNSTGTNKVIKFLVGDAGVLTPWLWGFLGRLAAAVLGSYVVKQFPKDGEISTGYFCLVIFQHLLGSFMNTVQFIGISAFHTRVADPVLGGTYMTLLNTLSNFGGTWPRLIIMSMINYFTVYQCTIPGTNKVYVTHGGSMQACTELLNGTVTILRDGYYITNLICIVVGLFLYFGYLKRKILHLQSLPISSWRCT", "length": 560 }, "evidence": [ { "id": "I3LE25", "url": "https://omabrowser.org/oma/group/I3LE25/", "database": "OMA" } ], "glygen_name": "Yeast", "common_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q6AYY8-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "Slc33a1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MSPTISHKDNSRQRRSGMFGHALDMKSGPLPPGGWDDNHQDSVGGEGDREVLLGDVGPGDFPKAKRSYRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYFKNFGRRKSWLVPTQYILGIFMIYLSTQVDRLLGNIDGRTPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKETREASVVKEETQGITDTYKLLFSIIKMPAVLAFCLLILTSKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLLISKYTAGPQPLNIFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYIIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPEAIELCKKLGGSCVTALDGYYVESIVCVLIGFGWWFFLGPKFKKLQDEGPSSWKCKRTN", "length": 550 }, "evidence": [ { "id": "I3LE25", "url": "https://omabrowser.org/oma/group/I3LE25/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q99J27-1", "protein_name": "Acetyl-coenzyme A transporter 1", "gene_name": "Slc33a1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MSPTISHKDSSRQRRSGMFSHALDMKSGPLPPGGWDDSRRDSVGGEGDREVLLGDAGPGDLPKAPRSYRSELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYFKNFGRRKSWLVPTQYTLGIFMIYLSTQVDRLLGNIDGRTPDVVALTVTFFLFEFLAATQDIAVDGWALTMLSRENVGYASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENREASIVKEETQGITDTYKLLFSIIKMPAVLAFCLLILTSKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLLISKYTAGPQPLNIFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPLYYYIIVLLSYALHQVTLYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAIELCKKLGGSCVTALDGYYVESIICVLIGFGWWFFLGPKFKKLQDEGPSSWKCKRNN", "length": 550 }, "evidence": [ { "id": "I3LE25", "url": "https://omabrowser.org/oma/group/I3LE25/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LE25", "url": "https://www.uniprot.org/uniprotkb/I3LE25" } ], "pmid": "" }, { "name": "endoplasmic reticulum membrane", "id": "GO:0005789", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005789", "evidence": [ { "database": "UniProtKB", "id": "I3LE25", "url": "https://www.uniprot.org/uniprotkb/I3LE25" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 2, "go_terms": [ { "name": "acetyl-CoA transmembrane transporter activity", "id": "GO:0008521", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0008521", "evidence": [ { "database": "UniProtKB", "id": "I3LE25", "url": "https://www.uniprot.org/uniprotkb/I3LE25" } ], "pmid": "" }, { "name": "protein homodimerization activity", "id": "GO:0042803", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0042803", "evidence": [ { "database": "UniProtKB", "id": "I3LE25", "url": "https://www.uniprot.org/uniprotkb/I3LE25" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "acetyl-CoA transmembrane transport", "id": "GO:0035348", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0035348", "evidence": [ { "database": "UniProtKB", "id": "I3LE25", "url": "https://www.uniprot.org/uniprotkb/I3LE25" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 103, "end_pos": 105, "annotation": "n_glycosylation_sequon" }, { "start_pos": 20, "end_pos": 22, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [ { "id": "75039", "name": "", "equation": "acetyl-CoA(in) = acetyl-CoA(out)", "summary": "", "cellular_location": "", "input_participant_list": [], "output_participant_list": [], "enzyme_list": [], "evidence": [ { "id": "75039", "database": "Rhea", "url": "https://www.rhea-db.org/rhea/75039" } ] } ], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 103, "end_pos": 105 }, { "start_pos": 20, "end_pos": 22 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPAGCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPRWRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGETTKAYQSPSVPGTTAQPVTLMQVPGTTAVEATHTALSKPSPSAGFTTSSLRLQPVGQRSRELDLWCTTTYTNSQNSPQANPGFVPKEELSTQSLEPVSQGDPSCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQFNLKTHMNSRDLKTAIEKITQRGGLSNVGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDKVEEASRLARESGINIFFITIEGAVENEKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQPLVKRVCDTDRLACSKTCLNSADIGFVIDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAVQYTYEQRLEFGFDQYTTKPDVLNAIKRVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILITDGRSYDDVRIPAMVAHHKGVITYAIGVAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKIIQNICTEFNSQPRN", "length": 656, "header": "tr|I3LID8-1|I3LID8_PIG Isoform 1 of Vitrin OS=Sus scrofa OX=9823 GN=VIT PE=4 SV=3 CANONICAL=I3LID8-1" }, "isoforms": [ { "isoform_ac": "A0A287ASF5-1", "url": "https://www.uniprot.org/uniprotkb/I3LID8/entry#A0A287ASF5-1", "sequence": { "sequence": "MNPEFLVKCPAGCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPRWRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGETTKAYQSPSVPGTTAQPVTLMQVPGTTAVEATHTALSKPSPSAGFTTSSLRLQPVGQRSRELGEEPDLWKPGSVLLDAGFVPKEELSTQSLEPVSQGDPSCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQFNLKTHMNSRDLKTAIEKITQRGGLSNVGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDKVEEASRLARESGINIFFITIEGAVENEKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQPLVKRVCDTDRLACSKTCLNSADIGFVIDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAVQYTYEQRLEFGFDQYTTKPDVLNAIKRVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILITDGRSYDDVRIPAMVAHHKGVITYAIGVAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKIIQNICTEFNSQPRN", "length": 600, "header": "tr|A0A287ASF5-1|A0A287ASF5_PIG Computationally mapped isoform of Vitrin OS=Sus scrofa OX=9823 GN=VIT PE=4 SV=1 CANONICAL=I3LID8-1" }, "locus": { "chromosome": "3", "start_pos": 103446646, "end_pos": 103379556, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000058017.3", "url": "https://www.ensembl.org/id/ENSSSCT00000058017.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000047021.2", "url": "https://www.ensembl.org/id/ENSSSCP00000047021.2" } ] } }, { "isoform_ac": "A0A5G2QJP7-1", "url": "https://www.uniprot.org/uniprotkb/I3LID8/entry#A0A5G2QJP7-1", "sequence": { "sequence": "MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPAGCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPRWRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGKCPHVISSKSSGFVNRQYCVLGDSAEISILPSQAPLTPVIF", "length": 204, "header": "tr|A0A5G2QJP7-1|I3LID8_PIG Computationally mapped isoform of Vitrin OS=Sus scrofa OX=9823 GN=VIT PE=4 SV=1 CANONICAL=I3LID8-1" }, "locus": { "chromosome": "3", "start_pos": 103468889, "end_pos": 103434578, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000072859.1", "url": "https://www.ensembl.org/id/ENSSSCT00000072859.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064707.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064707.1" } ] } }, { "isoform_ac": "A0A5G2R485-1", "url": "https://www.uniprot.org/uniprotkb/I3LID8/entry#A0A5G2R485-1", "sequence": { "sequence": "MGIVVLTMKASVIEMFLAVPQINCDVKAGKIMNPEFLVKCPAGCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPRWRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGETTKAYQSPSVPGTTAQPVTLMQVPGTTAVEATHTALSKPSPSAGFTTSSLRLQPVGQRSRELGEEPDLWKPGSVLLDAGFVPKEELSTQSLEPVSQGDPSCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQFNLKTHMNSRDLKTAIEKITQRGGLSNVGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDKVEEASRLARESGINIFFITIEGAVENEKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQPLVKRVCDTDRLACSKTCLNSADIGFVIDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAVQYTYEQRLEFGFDQYTTKPDVLNAIKRVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILITDGRSYDDVRIPAMVAHHKGVITYAIGVAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKIIQNICTEFNSQPRN", "length": 631, "header": "tr|A0A5G2R485-1|I3LID8_PIG Computationally mapped isoform of Vitrin OS=Sus scrofa OX=9823 GN=VIT PE=4 SV=1 CANONICAL=I3LID8-1" }, "locus": { "chromosome": "3", "start_pos": 103468889, "end_pos": 103379556, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088489.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088489.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000065372.1", "url": "https://www.ensembl.org/id/ENSSSCP00000065372.1" } ] } }, { "isoform_ac": "I3LID8-1", "url": "https://www.uniprot.org/uniprotkb/I3LID8/entry#I3LID8-1", "sequence": { "sequence": "MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPAGCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPRWRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGETTKAYQSPSVPGTTAQPVTLMQVPGTTAVEATHTALSKPSPSAGFTTSSLRLQPVGQRSRELDLWCTTTYTNSQNSPQANPGFVPKEELSTQSLEPVSQGDPSCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQFNLKTHMNSRDLKTAIEKITQRGGLSNVGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDKVEEASRLARESGINIFFITIEGAVENEKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQPLVKRVCDTDRLACSKTCLNSADIGFVIDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAVQYTYEQRLEFGFDQYTTKPDVLNAIKRVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILITDGRSYDDVRIPAMVAHHKGVITYAIGVAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKIIQNICTEFNSQPRN", "length": 656, "header": "tr|I3LID8-1|I3LID8_PIG Isoform 1 of Vitrin OS=Sus scrofa OX=9823 GN=VIT PE=4 SV=3 CANONICAL=I3LID8-1" }, "locus": { "chromosome": "3", "start_pos": 103468889, "end_pos": 103379556, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023727.4", "url": "https://www.ensembl.org/id/ENSSSCT00000023727.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023843.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023843.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QJP7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QJP7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "extracellular region", "id": "GO:0005576", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005576", "evidence": [ { "database": "UniProtKB", "id": "I3LID8", "url": "https://www.uniprot.org/uniprotkb/I3LID8" } ], "pmid": "" }, { "name": "interstitial matrix", "id": "GO:0005614", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005614", "evidence": [ { "database": "UniProtKB", "id": "I3LID8", "url": "https://www.uniprot.org/uniprotkb/I3LID8" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 4, "go_terms": [ { "name": "nervous system development", "id": "GO:0007399", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0007399", "evidence": [ { "database": "UniProtKB", "id": "I3LID8", "url": "https://www.uniprot.org/uniprotkb/I3LID8" } ], "pmid": "" }, { "name": "spinal cord development", "id": "GO:0021510", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0021510", "evidence": [ { "database": "UniProtKB", "id": "I3LID8", "url": "https://www.uniprot.org/uniprotkb/I3LID8" } ], "pmid": "" }, { "name": "extracellular matrix organization", "id": "GO:0030198", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0030198", "evidence": [ { "database": "UniProtKB", "id": "I3LID8", "url": "https://www.uniprot.org/uniprotkb/I3LID8" } ], "pmid": "" }, { "name": "positive regulation of cell-substrate adhesion", "id": "GO:0010811", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0010811", "evidence": [ { "database": "UniProtKB", "id": "I3LID8", "url": "https://www.uniprot.org/uniprotkb/I3LID8" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "glycosaminoglycan binding", "id": "GO:0005539", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005539", "evidence": [ { "database": "UniProtKB", "id": "I3LID8", "url": "https://www.uniprot.org/uniprotkb/I3LID8" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 498, "end_pos": 500, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LID8-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 656, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LID8-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LID8" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LID8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LID8" }, { "id": "PS50820", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50820" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "LCCL", "eco_id": "ECO_0000259", "start_pos": 40, "end_pos": 133, "start_aa": "Thr", "end_aa": "Phe", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LID8", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LID8" }, { "id": "PS50234", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50234" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "VWFA", "eco_id": "ECO_0000259", "start_pos": 271, "end_pos": 456, "start_aa": "Asp", "end_aa": "Val", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 498, "end_pos": 500 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LP82-1", "uniprot_ac": "I3LP82", "uniprot_id": "I3LP82_PIG", "mass": { "chemical_mass": 29291.0, "monoisotopic_mass": 29291.0 }, "refseq": {}, "gene_names": [ { "name": "LOC100737121", "type": "recommended", "evidence": [ { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82" } ] } ], "protein_names": [ { "name": "Progestin and adipoQ receptor family member 4", "type": "synonym", "evidence": [ { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82/entry#names_and_taxonomy" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LP82", "url": "https://www.uniprot.org/uniprotkb/I3LP82" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "LOC100737121", "url": "https://www.uniprot.org/uniprotkb/I3LP82", "locus": {} } ], "crossref": [ { "id": "ENSSSCG00000026248", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000026248", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "IPR004254", "url": "https://www.ebi.ac.uk/interpro/entry/IPR004254", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100627080", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627080", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "HHACPPD", "url": "https://omabrowser.org/oma/group/HHACPPD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LP82", "url": "https://www.orthodb.org/?gene=I3LP82", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR20855", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20855", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR20855:SF138", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR20855:SF138", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF03006", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF03006", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "A0A5G2QME7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QME7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QME7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QME7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9C9", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9C9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R9C9-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9C9-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LP82", "url": "https://www.uniprot.org/uniprotkb/I3LP82", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LP82-1", "url": "https://www.uniprot.org/uniprotkb/I3LP82-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MAFLAGPRLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYMHNELGNIYTHGLALLGFLVLLPMTLPWGHLGKDGWLWGTHCVACLAPPAGSVLYHLFMCHKGGSPVYTRLLALDMCGVCLVNTLGALPIIHCTLACRPWLRPAALVGYTVLSGVAGWRALTAPSTSARLRAFGWQAGARLLVFGARGVGLGSGAPGSLPCYLRMDALALLGGLVNVARLPERWGPGRFDYWGNSHQIMHLLSVGSILQLHAGVVPDLLWAAHHTCPPD", "length": 273, "header": "tr|I3LP82-1|I3LP82_PIG Isoform 1 of Progestin and adipoQ receptor family member 4 OS=Sus scrofa OX=9823 GN=LOC100737121 PE=1 SV=1 CANONICAL=I3LP82-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QME7-1", "url": "https://www.uniprot.org/uniprotkb/I3LP82/entry#A0A5G2QME7-1", "sequence": { "sequence": "MAFLAGPRLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYMHNELGNIYTHGLALLGFLVLLPMTLPWGHLGKDGWLWGTHCVACLAPPAGSVLYHLFMCHKGGSPVYTRLLALDMCGVCLVNTLGYGPPSGLGAGLGGSVKPQRPGYGNGLGAATFPQLGAQPGAQPAPPVSPGFGSRNGFGVAFPGAGALPGIAGSVKPPKPGFSNRNGMGAGALPGAGAQQGFGTENGAQPGLGGPKAGKPGSATENGYGPDFGADVKPQTPGFGNGLGAQSGSAAENGYGPGFAAGLKPQKPGFGTSNGLGAQPVPSPAIQWGPKPPKAGYQPALGYRPGVELGFSGGFKPQKVGFGYRNGALGAGLFLEARPQPGFPGADGFRNGFRGEEALVHPEVAAPAPEGNGQARALRGSPWPSLHSWGAALKARYGAGNALPEVQSQPGRCPLGKC", "length": 450, "header": "tr|A0A5G2QME7-1|I3LP82_PIG Computationally mapped isoform of Progestin and adipoQ receptor family member 4 OS=Sus scrofa OX=9823 GN=LOC100737121 PE=1 SV=1 CANONICAL=I3LP82-1" }, "locus": { "chromosome": "3", "start_pos": 39212949, "end_pos": 39184534, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000082790.2", "url": "https://www.ensembl.org/id/ENSSSCT00000082790.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066052.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066052.1" } ] } }, { "isoform_ac": "A0A5G2R9C9-1", "url": "https://www.uniprot.org/uniprotkb/I3LP82/entry#A0A5G2R9C9-1", "sequence": { "sequence": "MAFLAGPRLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYMHNELGNIYTHGLALLGFLVLLPMTLPWGHLGKDGWLWGTHCVACLAPPAGSVLYHLFMCHKGGSPVYTRLLALDMCGVCLVNTLGLPPPSAGLGKGLGGSIGYRSGYGPPSGLGAGLGGSVKPQRPGFRPGIGLGVRAFPGAAAQPGYGNGLGAATFPQLGAQPGAQPAPPVSPGFGSRNGFGVAFPGAGALPGIAGSVKPPKPGFSNRNGMGAGALPGAGAQQGPSIGDGLGAQPGFGAGGRLQAPGFGTENGAQPGLGGPKAGKPGSATENGYGPDFGADVKPQTPGFGNGLGAQSGSAAENGYGPGFAAGLKPQKPGFGTSNGLGAQPGLGGGLKPQKPVPSPAIQWGPKPPKAGYQPALGYRPGVELGFSGGFKPQKVGFGYRNGALGAGLFLEARPQPGFPGADGFRNGFRGEEALVHPEVAAPAPEGNGQARALRGSPWPSLHSWGAALKARYGAGNALPEVQSQPGRCPLGKC", "length": 525, "header": "tr|A0A5G2R9C9-1|A0A5G2R9C9_PIG Computationally mapped isoform of Progestin and adipoQ receptor family member 4 OS=Sus scrofa OX=9823 GN=LOC100737121 PE=3 SV=1 CANONICAL=I3LP82-1" }, "locus": { "chromosome": "3", "start_pos": 39212949, "end_pos": 39184534, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090413.1", "url": "https://www.ensembl.org/id/ENSSSCT00000090413.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000070729.1", "url": "https://www.ensembl.org/id/ENSSSCP00000070729.1" } ] } }, { "isoform_ac": "I3LP82-1", "url": "https://www.uniprot.org/uniprotkb/I3LP82/entry#I3LP82-1", "sequence": { "sequence": "MAFLAGPRLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYMHNELGNIYTHGLALLGFLVLLPMTLPWGHLGKDGWLWGTHCVACLAPPAGSVLYHLFMCHKGGSPVYTRLLALDMCGVCLVNTLGALPIIHCTLACRPWLRPAALVGYTVLSGVAGWRALTAPSTSARLRAFGWQAGARLLVFGARGVGLGSGAPGSLPCYLRMDALALLGGLVNVARLPERWGPGRFDYWGNSHQIMHLLSVGSILQLHAGVVPDLLWAAHHTCPPD", "length": 273, "header": "tr|I3LP82-1|I3LP82_PIG Isoform 1 of Progestin and adipoQ receptor family member 4 OS=Sus scrofa OX=9823 GN=LOC100737121 PE=1 SV=1 CANONICAL=I3LP82-1" }, "locus": { "chromosome": "3", "start_pos": 39212949, "end_pos": 39210062, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022821.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022821.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025908.1", "url": "https://www.ensembl.org/id/ENSSSCP00000025908.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QME7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QME7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100627080", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100627080", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "E7EYL0-1", "protein_name": "Progestin and adipoQ receptor family member 4a", "gene_name": "paqr4a", "tax_id": 7955, "organism": "Danio rerio", "sequence": { "sequence": "MAFLNGPRLLDWANSPPHLQFNKYVLTGYRPISTVQECIKSLFYLHNELGNIYTHGIPLLCFLVLLPLNIPWSQISVTWLGVVHFLACLSPQLGSVVYHLFMNHEGGEPVYKTLLTLDMCGICMINTLGALPIVYSTLLCYPFTRTVALLMYILLSSYAIYCAITARSRVRRLRSFAWQALFRFSFFLLRWVGVGGGSPTSLRHFLTMDALAVLGGVINITRIPERFRPGLFDYWCNSHQIMHVLVVVSILYLHWGVLDDLLWINTYHCPSD", "length": 272 }, "evidence": [ { "id": "I3LP82", "url": "https://omabrowser.org/oma/group/I3LP82/", "database": "OMA" } ], "glygen_name": "Zebrafish", "common_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q568Z3-1", "protein_name": "Progestin and adipoQ receptor family member 4", "gene_name": "Paqr4", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MAFLTGPRLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYLHNELGNIYTHGLALLGFLVLVPMTMPWSQLGKDGWLGGTHCVACLAPPAASVLYHLFMCHQGGSPVYTRLLALDMCGVCLVNTLGALPIIHCTLACRPWLRPAALMGYTALSGVAGWRALTAPSTSARLRAFGWQAGARLLVFGARGVGLGSGAPGSLPCYLRMDALALLGGLVNVARLPERWGPGRFDYWGNSHQIMHLLSVGSILQLHAGVVPDLLWAARHACPPD", "length": 273 }, "evidence": [ { "id": "I3LP82", "url": "https://omabrowser.org/oma/group/I3LP82/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8N4S7-1", "protein_name": "Progestin and adipoQ receptor family member 4", "gene_name": "PAQR4", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MAFLAGPRLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYLHNELGNIYTHGLALLGFLVLVPMTMPWGQLGKDGWLGGTHCVACLAPPAGSVLYHLFMCHQGGSAVYARLLALDMCGVCLVNTLGALPIIHCTLACRPWLRPAALVGYTVLSGVAGWRALTAPSTSARLRAFGWQAAARLLVFGARGVGLGSGAPGSLPCYLRMDALALLGGLVNVARLPERWGPGRFDYWGNSHQIMHLLSVGSILQLHAGVVPDLLWAAHHACPRD", "length": 273 }, "evidence": [ { "id": "I3LP82", "url": "https://omabrowser.org/oma/group/I3LP82/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" }, { "uniprot_canonical_ac": "Q9JJE4-1", "protein_name": "Progestin and adipoQ receptor family member 4", "gene_name": "Paqr4", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MAFLTGPRLLDWASSPPHLQFNKFVLTGYRPASSGSGCLRSLFYLHNELGNIYTHGLALLGFLVLVPMTMPWSQLGKDGWLGGTHCVACLVPPAASVLYHLFMCHQGGSPVYTRLLALDMCGVCLVNTLGALPIIHCTLACRPWLRPAALMGYTALSGVAGWRALTAPSTSARLRAFGWQAGARLLVFGARGVGLGSGAPGSLPCYLRMDALALLGGLVNVARLPERWGPGRFDYWGNSHQIMHLLSVGSILQLHAGVVPDLLWAAHHACPPD", "length": 273 }, "evidence": [ { "id": "I3LP82", "url": "https://omabrowser.org/oma/group/I3LP82/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" } ], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "membrane", "id": "GO:0016020", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0016020", "evidence": [ { "database": "UniProtKB", "id": "I3LP82", "url": "https://www.uniprot.org/uniprotkb/I3LP82" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "metal ion binding", "id": "GO:0046872", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0046872", "evidence": [ { "database": "UniProtKB", "id": "I3LP82", "url": "https://www.uniprot.org/uniprotkb/I3LP82" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [], "binding_sites": [ { "evidence": [ { "id": "A0A5G2QME7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QME7#function" }, { "id": "A0A5G2QME7", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QME7" }, { "id": "PIRSR604254-1", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR604254-1" }, { "id": "A0A5G2R9C9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9C9#function" }, { "id": "A0A5G2R9C9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R9C9" }, { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82#function" }, { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82" } ], "binding_site_uniprot": 100, "amino_acid": "His", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "", "eco_id": "ECO_0000256", "start_pos": 100, "end_pos": 100, "start_aa": "His", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82#function" }, { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82" }, { "id": "PIRSR604254-1", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR604254-1" } ], "binding_site_uniprot": 240, "amino_acid": "His", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "", "eco_id": "ECO_0000256", "start_pos": 240, "end_pos": 240, "start_aa": "His", "end_aa": "His", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82#function" }, { "id": "I3LP82", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LP82" }, { "id": "PIRSR604254-1", "database": "PIR Site Rule", "url": "https://proteininformationresource.org/cgi-bin/pirrule?id=PIRSR604254-1" } ], "binding_site_uniprot": 244, "amino_acid": "His", "chebi_lig_id": "CHEBI_29105", "ligand": "Zn(2+)", "ligand_label": "", "uniprotkb_ligand_comment": "", "eco_id": "ECO_0000256", "start_pos": 244, "end_pos": 244, "start_aa": "His", "end_aa": "His", "glycosite_overlap": "" } ], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LGA7-1", "uniprot_ac": "I3LGA7", "uniprot_id": "I3LGA7_PIG", "mass": { "chemical_mass": 56980.0, "monoisotopic_mass": 56980.0 }, "refseq": {}, 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"ENSSSCG00000028730", "url": "https://www.ensembl.org/id/ENSSSCG00000028730" } ] } } ], "crossref": [ { "id": "I3LGA7", "url": "https://alphafold.ebi.ac.uk/entry/I3LGA7", "database": "AlphaFoldDB", "categories": [] }, { "id": "ENSSSCG00000028730", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028730", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100521206", "url": "https://www.ncbi.nlm.nih.gov/gene/100521206", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR009837", "url": "https://www.ebi.ac.uk/interpro/entry/IPR009837", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100521206", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521206", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QN69", "url": "https://www.orthodb.org/?gene=A0A5G2QN69", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR16510", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16510", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR16510:SF4", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR16510:SF4", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF07175", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF07175", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "R-SSC-381426", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "R-SSC-8957275", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "database": "Reactome", "categories": [ "Enzyme and Pathway" ] }, { "id": "A0A5G2QN69", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN69", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QN69-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN69-1", 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PE=4 SV=3 CANONICAL=I3LGA7-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QN69-1", "url": "https://www.uniprot.org/uniprotkb/I3LGA7/entry#A0A5G2QN69-1", "sequence": { "sequence": "MRIVCLGLFLFSLTWAAPTFQPQAEKAKHDCVEKQRITYKGHHEKHGYYIFKYVYTSSGRKNQTGMKQEEKNKGDIALPHSGKREAPTENTGQEKGKNLSLPGNSENNKSTKAQNLIGNRKTMNEDQSIGNKENAQNDLKMAIYPKSSENHKAEDRNSALSKLQDQEEYGAALIRNHMQHAMEPGAVIELLGEENKENKPRNVLSKIPAAANYAKAPSNIKKNHPRGSQAQNIPVKSRSPHRLQHNTDYLKQLPKVKKVPSDFEGSGYPDLQGRGDNDISPFSGDGPPFKDLSGKGEATGPDREGTDIQTEFSSPSEAETIHPDARGPGSNEIPEKEGNGRDTIGTRGKTAKEANGADVSLVEGGNGITGSTDFKKLPGKEGNRVDGSSQNAHQGKIEFHYPHAPSKDKRKGGSSDGAESTNYNEIPKYGKGSSRKGPGPSDRSQVTSSEKQSFPSKGKGQGQLTPSRGLDNNIKNEMGSHSDPNNEGTIITHGRKNHDVHYRQNNYTRSKGMSQRKGSWGYRKPPSNRRFHPPRKHDSSESSDSGSSSESDGD", "length": 554, "header": "tr|A0A5G2QN69-1|I3LGA7_PIG Computationally mapped isoform of Matrix extracellular phosphoglycoprotein OS=Sus scrofa OX=9823 GN=MEPE PE=4 SV=1 CANONICAL=I3LGA7-1" }, "locus": { "chromosome": "8", "start_pos": 131198411, "end_pos": 131186891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000088046.2", "url": "https://www.ensembl.org/id/ENSSSCT00000088046.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000063553.1", "url": "https://www.ensembl.org/id/ENSSSCP00000063553.1" } ] } }, { "isoform_ac": "I3LGA7-1", "url": "https://www.uniprot.org/uniprotkb/I3LGA7/entry#I3LGA7-1", "sequence": { "sequence": "MRIVCLGLFLFSLTWAAPTFQPQAEKAKHDCVEKQRQEEKNKGDIALPHSGKREAPTENTGQEKGKNLSLPGNSENNKSTKAQNLIGNRKTMNEDQSIGNKENAQNDLKMAIYPKSSENHKAEDRNSALSKLQDQEEYGAALIRNHMQHAMEPGAVIELLGEENKENKPRNVLSKIPAAANYAKAPSNIKKNHPRGSQAQNIPVKSRSPHRLQHNTDYLKQLPKVKKVPSDFEGSGYPDLQGRGDNDISPFSGDGPPFKDLSGKGEATGPDREGTDIQTEFSSPSEAETIHPDARGPGSNEIPEKEGNGRDTIGTRGKTAKEANGADVSLVEGGNGITGSTDFKKLPGKEGNRVDGSSQNAHQGKIEFHYPHAPSKDKRKGGSSDGAESTNYNEIPKYGKGSSRKGPGPSDRSQVTSSEKQSFPSKGKGQGQLTPSRGLDNNIKNEMGSHSDPNNEGTIITHGRKNHDVHYRQNNYTRSKGMSQRKGSWGYRKPPSNRRFHPPRKHDSSESSDSGSSSESDGD", "length": 523, "header": "tr|I3LGA7-1|I3LGA7_PIG Isoform 1 of Matrix extracellular phosphoglycoprotein OS=Sus scrofa OX=9823 GN=MEPE PE=4 SV=3 CANONICAL=I3LGA7-1" }, "locus": { "chromosome": "8", "start_pos": 131198411, "end_pos": 131186891, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024350.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024350.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000023100.3", "url": "https://www.ensembl.org/id/ENSSSCP00000023100.3" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QN69", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QN69" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100521206", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100521206", "resource": "KEGG Pathway" }, { "id": "R-SSC-381426", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-381426", "resource": "Reactome", "description": "Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" }, { "id": "R-SSC-8957275", "name": "", "url": "https://www.reactome.org/PathwayBrowser/#R-SSC-8957275", "resource": "Reactome", "description": "Post-translational protein phosphorylation" } ], "orthologs": [], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "extracellular matrix protein binding", "id": "GO:1990430", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990430", "evidence": [ { "database": "UniProtKB", "id": "I3LGA7", "url": "https://www.uniprot.org/uniprotkb/I3LGA7" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 1, "go_terms": [ { "name": "extracellular matrix", "id": "GO:0031012", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031012", "evidence": [ { "database": "UniProtKB", "id": "I3LGA7", "url": "https://www.uniprot.org/uniprotkb/I3LGA7" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "biomineral tissue development", "id": "GO:0031214", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031214", "evidence": [ { "database": "UniProtKB", "id": "I3LGA7", "url": "https://www.uniprot.org/uniprotkb/I3LGA7" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 475, "end_pos": 477, "annotation": "n_glycosylation_sequon" }, { "start_pos": 67, "end_pos": 69, "annotation": "n_glycosylation_sequon" }, { "start_pos": 77, "end_pos": 79, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LGA7-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 523, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LGA7-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LGA7" } ], "lectin_list": [], "domain_list": [], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], 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"MVKWSCPSCGPEPGGEEKKGRGNPISVQLFPPELVEHIVSFLPVRDVVALSQTCHYFHEVCDAEGVWRRICRRLSPRLREQGSGVRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHIFILDYAGTLFFLKNALVSSTLGQIQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREQPGVVGSTGSRTCDCVEVYLQSSGQRVFKMTFHHSMSFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSRCLPHLRVACMASNQSSTLYITDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVHYLQRPIALWCGLNHSLVLSQGSDFSKELLGCGCGAGGRLPGWPKGSASFVKLHVKVPLCACSLCSTRECLYMLSSHDIGHQPAYRDLPASRVLGTAEPSLGAGAPQDPGGAARACEEYLSQIHSCPTLQDRMEKMKEIVGWMPLMAAQKDFFWEALDMLQRAAGGVGQGPPTPES", "length": 568, "header": "tr|I3LMD9-1|I3LMD9_PIG Isoform 1 of F-box protein 24 OS=Sus scrofa OX=9823 GN=FBXO24 PE=4 SV=3 CANONICAL=I3LMD9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QNR4-1", "url": "https://www.uniprot.org/uniprotkb/I3LMD9/entry#A0A5G2QNR4-1", "sequence": { "sequence": "MVWERQQGRGGQGARRDEGRSREGAVRMVRRSRRRKLQKFTGLCGREGLRVKWSCPSCGPEPGGEEKKGRGNPISVQLFPPELVEHIVSFLPVRDVVALSQTCHYFHEVCDAEGVWRRICRRLSPRLREQGSGVRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHIFILDYAGTLFFLKNALVSSTLGQIQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREQPGVVGSTGSRTCDCVEVYLQSSGQRVFKMTFHHSMSFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSRCLPHLRVACMASNQSSTLYITDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVHYLQRPIALWCGLNHSLVLSQGSDFSKELLGCGCGAGGRLPGWPKGSASFVKLHVKVPLCACSLCSTRECLYMLSSHDIGHQPAYRDLPASRVLGTAEPSLGAGAPQDPGGAARACEEYLSQIHSCPTLQDRMEKMKEIVGWMPLMAAQKDFFWEALDMLQRAAGGVGQGPPTPES", "length": 617, "header": "tr|A0A5G2QNR4-1|I3LMD9_PIG Computationally mapped isoform of F-box protein 24 OS=Sus scrofa OX=9823 GN=FBXO24 PE=4 SV=1 CANONICAL=I3LMD9-1" }, "locus": { "chromosome": "3", "start_pos": 8522117, "end_pos": 8513529, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066543.2", "url": "https://www.ensembl.org/id/ENSSSCT00000066543.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066533.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066533.1" } ] } }, { "isoform_ac": "A0A5G2QX05-1", "url": "https://www.uniprot.org/uniprotkb/I3LMD9/entry#A0A5G2QX05-1", "sequence": { "sequence": "MGEKAVPSLRRRRVKWSCPSCGPEPGGEEKKGRGNPISVQLFPPELVEHIVSFLPVRDVVALSQTCHYFHEVCDAEGVWRRICRRLSPRLREQDTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHIFILDYAGTLFFLKNALVSSTLGQIQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREQPGVVGSTGSRTCDCVEVYLQSSGQRVFKMTFHHSMSFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSRCLPHLRVACMASNQSSTLYITDPILCSWLQSPWPGG", "length": 319, "header": "tr|A0A5G2QX05-1|I3LMD9_PIG Computationally mapped isoform of F-box protein 24 OS=Sus scrofa OX=9823 GN=FBXO24 PE=4 SV=1 CANONICAL=I3LMD9-1" }, "locus": { "chromosome": "3", "start_pos": 8518154, "end_pos": 8511730, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000076504.2", "url": "https://www.ensembl.org/id/ENSSSCT00000076504.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000069474.1", "url": "https://www.ensembl.org/id/ENSSSCP00000069474.1" } ] } }, { "isoform_ac": "I3LMD9-1", "url": "https://www.uniprot.org/uniprotkb/I3LMD9/entry#I3LMD9-1", "sequence": { "sequence": "MVKWSCPSCGPEPGGEEKKGRGNPISVQLFPPELVEHIVSFLPVRDVVALSQTCHYFHEVCDAEGVWRRICRRLSPRLREQGSGVRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHIFILDYAGTLFFLKNALVSSTLGQIQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREQPGVVGSTGSRTCDCVEVYLQSSGQRVFKMTFHHSMSFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSRCLPHLRVACMASNQSSTLYITDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVHYLQRPIALWCGLNHSLVLSQGSDFSKELLGCGCGAGGRLPGWPKGSASFVKLHVKVPLCACSLCSTRECLYMLSSHDIGHQPAYRDLPASRVLGTAEPSLGAGAPQDPGGAARACEEYLSQIHSCPTLQDRMEKMKEIVGWMPLMAAQKDFFWEALDMLQRAAGGVGQGPPTPES", "length": 568, "header": "tr|I3LMD9-1|I3LMD9_PIG Isoform 1 of F-box protein 24 OS=Sus scrofa OX=9823 GN=FBXO24 PE=4 SV=3 CANONICAL=I3LMD9-1" }, "locus": { "chromosome": "3", "start_pos": 8522117, "end_pos": 8513529, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000031465.4", "url": "https://www.ensembl.org/id/ENSSSCT00000031465.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025260.3", "url": "https://www.ensembl.org/id/ENSSSCP00000025260.3" } ] } }, { "isoform_ac": "I3LQ44-1", "url": "https://www.uniprot.org/uniprotkb/I3LMD9/entry#I3LQ44-1", "sequence": { "sequence": "MGEKAVPSLRRRRVKWSCPSCGPEPGGEEKKGRGNPISVQLFPPELVEHIVSFLPVRDVVALSQTCHYFHEVCDAEGVWRRICRRLSPRLREQGSGVRPWKRAAILNYTKGLYFQAFGGRRRCLSKSVAPLLAHGYRRFLPTKDHIFILDYAGTLFFLKNALVSSTLGQIQWKRACRYVVLCRGAKDFASDPRCDTVYRKYLYVLATREQPGVVGSTGSRTCDCVEVYLQSSGQRVFKMTFHHSMSFKQIVLVGQETQRALLLLTEEGKIYSLVVNETQLDQPRSYTVQLALRKVSRCLPHLRVACMASNQSSTLYITDQGGVYFEVHTPGVYRDLFGTLQAFDPLDQQMPLALSLPAKILFCALGYNHLGLVDEFGRIFMQGNNRYGQLGTGDKMDRGEPTQVHYLQRPIALWCGLNHSLVLSQGSDFSKELLGCGCGAGGRLPGWPKGSASFVKLHVKVPLCACSLCSTRECLYMLSSHDIGHQPAYRDLPASRVLGTAEPSLGAGAPQDPGGAARACEEYLSQIHSCPTLQDRMEKMKEIVGWMPLMAAQKDFFWEALDMLQRAAGGVGQGPPTPES", "length": 580, "header": "tr|I3LQ44-1|I3LQ44_PIG Computationally mapped isoform of F-box protein 24 OS=Sus scrofa OX=9823 GN=FBXO24 PE=4 SV=1 CANONICAL=I3LMD9-1" }, "locus": { "chromosome": "3", "start_pos": 8522117, "end_pos": 8511730, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000025262.4", "url": "https://www.ensembl.org/id/ENSSSCT00000025262.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026222.1", "url": "https://www.ensembl.org/id/ENSSSCP00000026222.1" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QNR4", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QNR4" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [], "orthologs": [], "go_annotation": { "categories": [ { "name": "Cellular Component", "total": 2, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LMD9", "url": "https://www.uniprot.org/uniprotkb/I3LMD9" } ], "pmid": "" }, { "name": "SCF ubiquitin ligase complex", "id": "GO:0019005", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0019005", "evidence": [ { "database": "UniProtKB", "id": "I3LMD9", "url": "https://www.uniprot.org/uniprotkb/I3LMD9" } ], "pmid": "" } ] }, { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "ubiquitin-like ligase-substrate adaptor activity", "id": "GO:1990756", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:1990756", "evidence": [ { "database": "UniProtKB", "id": "I3LMD9", "url": "https://www.uniprot.org/uniprotkb/I3LMD9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "id": "GO:0031146", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0031146", "evidence": [ { "database": "UniProtKB", "id": "I3LMD9", "url": "https://www.uniprot.org/uniprotkb/I3LMD9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 264, "end_pos": 266, "annotation": "n_glycosylation_sequon" }, { "start_pos": 298, "end_pos": 300, "annotation": "n_glycosylation_sequon" }, { "start_pos": 406, "end_pos": 408, "annotation": "n_glycosylation_sequon" }, { "start_pos": 95, "end_pos": 97, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [ { "pdb_id": "AF-I3LMD9-F1", "pdb_chain": "global", "start_pos": 1, "end_pos": 568, "overlap": "1.0", "method": "AlphaFold", "type": "alphafold", "resolution": -1.0, "url": "https://data.glygen.org/ln2downloads/pdb/current/AF-I3LMD9-F1.pdb", "url_external": "https://alphafold.ebi.ac.uk/entry/I3LMD9" } ], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LMD9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LMD9" }, { "id": "PS50181", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50181" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "F-box", "eco_id": "ECO_0000259", "start_pos": 24, "end_pos": 70, "start_aa": "Pro", "end_aa": "Ile", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 264, "end_pos": 266 }, { "start_pos": 298, "end_pos": 300 }, { "start_pos": 406, "end_pos": 408 }, { "start_pos": 95, "end_pos": 97 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LQC9-1", "uniprot_ac": "I3LQC9", "uniprot_id": "I3LQC9_PIG", "mass": { "chemical_mass": 59580.0, "monoisotopic_mass": 59580.0 }, "refseq": { "ac": "XP_005655049", "name": "gypsy retrotransposon integrase-like protein 1 isoform X1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655049" }, "gene_names": [ { "name": "GIN1", "type": "recommended", "evidence": [ { "id": "I3LQC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQC9" } ] }, { "name": "GIN1", "type": "synonym", "evidence": [ { "id": "XP_005655049", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655049" } ] } ], "protein_names": [ { "name": "Gypsy retrotransposon integrase-like protein 1", "type": "recommended", "evidence": [ { "id": "I3LQC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQC9/entry#names_and_taxonomy" } ] }, { "name": "gypsy retrotransposon integrase-like protein 1 isoform X1", "type": "synonym", "evidence": [ { "id": "XP_005655049", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655049" } ] } ], "function": [], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LQC9", "url": "https://www.uniprot.org/uniprotkb/I3LQC9" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "GIN1", "url": "https://www.uniprot.org/uniprotkb/I3LQC9", "locus": { "chromosome": "2", "start_pos": 108561387, "end_pos": 108597262, "strand": "+", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000025287", "url": "https://www.ensembl.org/id/ENSSSCG00000025287" } ] } } ], "crossref": [ { "id": "ENSSSCG00000025287", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000025287", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "100625008", "url": "https://www.ncbi.nlm.nih.gov/gene/100625008", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR001584", "url": "https://www.ebi.ac.uk/interpro/entry/IPR001584", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR012337", "url": "https://www.ebi.ac.uk/interpro/entry/IPR012337", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR036397", "url": "https://www.ebi.ac.uk/interpro/entry/IPR036397", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR041588", "url": "https://www.ebi.ac.uk/interpro/entry/IPR041588", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050951", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050951", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100625008", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625008", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "YPNNWDD", "url": "https://omabrowser.org/oma/group/YPNNWDD/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LQC9", "url": "https://www.orthodb.org/?gene=I3LQC9", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR37984", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37984", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR37984:SF5", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR37984:SF5", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00665", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00665", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF17921", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF17921", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_005655049", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005655049", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A5G2QPA3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPA3", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPA3-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPA3-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQC9", "url": "https://www.uniprot.org/uniprotkb/I3LQC9", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LQC9-1", "url": "https://www.uniprot.org/uniprotkb/I3LQC9-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MVRSGKNGDLHLKQIAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKGKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDTGAHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKNTVILAPKQHLLKVENPWSIVTVDLMGPFHMSSRSHVYAIIMTDLFTKWVVILPLCDVSASEVSKAITNIFFLYGPPQKIIMDQRDEFIHQINLELCELFGTKQIVISQASQTVNPTESTPSTIKTFLSKHCADHPDNWDDHLSAVSFAFNVIHLEPSKNTPYFQMFNRNPYMPETSDILHEMDGDSTSMFAKILGAVKEADKIMANKTTSAGQMENNSFDELNKSKIIVKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITENGCAVLRDNTGTRLKRPIKMSHLKPYVRESSEQDSLYLLQGSVVADHDYIGLPEIPVGAYQANILVEDATIGIVDNELLTSSKDRELLEYRNAKISPLIEDHSTLEKQTFSLLDSSNQVLEYLS", "length": 522, "header": "tr|I3LQC9-1|I3LQC9_PIG Isoform 1 of Gypsy retrotransposon integrase-like protein 1 OS=Sus scrofa OX=9823 GN=GIN1 PE=4 SV=1 CANONICAL=I3LQC9-1" }, "isoforms": [ { "isoform_ac": "A0A5G2QPA3-1", "url": "https://www.uniprot.org/uniprotkb/I3LQC9/entry#A0A5G2QPA3-1", "sequence": { "sequence": "MVRSGKNGDLHLKQIAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKGKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDTGAHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKNTVILAPKQHLLKVENPWSIVTVDLMGPFHMSSRSHVYAIIMTDLFTKWVVILPLCDVSASEVSKAITNIFFLYGPPQKIIMDQRDEFIHQTVFISYKVQS", "length": 223, "header": "tr|A0A5G2QPA3-1|I3LQC9_PIG Computationally mapped isoform of Gypsy retrotransposon integrase-like protein 1 OS=Sus scrofa OX=9823 GN=GIN1 PE=4 SV=1 CANONICAL=I3LQC9-1" }, "locus": { "chromosome": "2", "start_pos": 108586068, "end_pos": 108562042, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000066454.1", "url": "https://www.ensembl.org/id/ENSSSCT00000066454.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000066728.1", "url": "https://www.ensembl.org/id/ENSSSCP00000066728.1" } ] } }, { "isoform_ac": "I3LQC9-1", "url": "https://www.uniprot.org/uniprotkb/I3LQC9/entry#I3LQC9-1", "sequence": { "sequence": "MVRSGKNGDLHLKQIAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKGKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDTGAHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKNTVILAPKQHLLKVENPWSIVTVDLMGPFHMSSRSHVYAIIMTDLFTKWVVILPLCDVSASEVSKAITNIFFLYGPPQKIIMDQRDEFIHQINLELCELFGTKQIVISQASQTVNPTESTPSTIKTFLSKHCADHPDNWDDHLSAVSFAFNVIHLEPSKNTPYFQMFNRNPYMPETSDILHEMDGDSTSMFAKILGAVKEADKIMANKTTSAGQMENNSFDELNKSKIIVKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITENGCAVLRDNTGTRLKRPIKMSHLKPYVRESSEQDSLYLLQGSVVADHDYIGLPEIPVGAYQANILVEDATIGIVDNELLTSSKDRELLEYRNAKISPLIEDHSTLEKQTFSLLDSSNQVLEYLS", "length": 522, "header": "tr|I3LQC9-1|I3LQC9_PIG Isoform 1 of Gypsy retrotransposon integrase-like protein 1 OS=Sus scrofa OX=9823 GN=GIN1 PE=4 SV=1 CANONICAL=I3LQC9-1" }, "locus": { "chromosome": "2", "start_pos": 108586068, "end_pos": 108561800, "strand": "+", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000024159.4", "url": "https://www.ensembl.org/id/ENSSSCT00000024159.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000026307.1", "url": "https://www.ensembl.org/id/ENSSSCP00000026307.1" } ] } } ], "glycosylation": [ { "glytoucan_ac": "", "type": "O-linked", "subtype": "", "prediction_tool_list": [ { "label": "isoglyp", "url": "https://github.com/jonmohl/ISOGlyP" } ], "site_category": "predicted", "site_category_dict": { "predicted": true }, "site_seq": "", "relation": "attached", "comment": "", "icn3d_view": {}, "start_pos": 242, "start_aa": "Thr", "end_pos": 242, "end_aa": "Thr", "residue": "Thr", "site_lbl": "Thr242", "evidence": [ { "id": "GLY_001152", "database": "GlyGen", "url": "https://data.glygen.org/GLY_001152" } ] } ], "phosphorylation": [], "glycation": [], "keywords": [ "glycoprotein", "glycoprotein_predicted" ], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPA3", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPA3" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100625008", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100625008", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8V0Y6T4-1", "protein_name": "Gypsy retrotransposon integrase-like protein 1", "gene_name": "GIN1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MVRSGKNGGLHLKQIAYYKRTGEYHPTTLSSERSGIRRAAKKFVFKENKLFYVGKDRKQMRLVIVSDEEKKNVLQKCHENAAGTHHGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKSTTTTTLKPYPIKAEDPWTAVTVALMGPFRATKRSHKYVIIMIDLFTKWTVILPLHDTSAAEIAKAIISVFFLYGPPQKMPIDQGKELVHQSCFLWINKELFALFGMKQIVLSYPQTNEVSERTCKTVKAFLNKYCTDHPNDWDEHLSAIAYAFNLTNLEPDRNTPYFQMFNRNPYVEPMNIRVEGEDSMFAKIFEATRRASQALEGEKTSDGQVEKTTSDEQKPRNKINVKRKSKQLSTLRLKVGHEVLRQRKNWWKDGRFQSEWVGPCIIDYITENGCAILRDATGSRLKRPIKMSHLKPYIRGSNEKDDRYFLQGAIVVDHDYIGLSERSHNTDQQDPAAEKEINAYVRGVTSAVQMPPSACKGQESADGRHQSELTEDHCVEPNSAKPEQWPSPCWTLQTKIEDT", "length": 531 }, "evidence": [ { "id": "I3LQC9", "url": "https://omabrowser.org/oma/group/I3LQC9/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "A4FUB7-1", "protein_name": "Gypsy retrotransposon integrase-like protein 1", "gene_name": "GIN1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MVRSGKNGDLHLKQIAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKEKKKVLRECHENDTGAHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKNTVILAPKQHLLKVENPWSIVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVVILPLCDVSASEISKAIINIFFLYGPPQKIIMDQRDEFIHQINVELCELFGTKQIVISHASQTINPAESTPSTIKTFLSKHCVDYPNDWDDHLPAVSFAFNVTHLEPTKNTPYFQMFNRNPYMPESSDIREVDGDNTSMFAKILDAIKEADKIMENKTTSVGQMENNNCHELNKSKIIVKKKPKQQNPFHLKVGHEVLRQRKNWWKDGRFRSEWVGPCVIDYITENGGAVLRDSSGARLKRPIKMSHLKPYVRESGEQDSLHLLHGSVVADHDYVGMPELPVGAYQASILVEDAAIGVDDSELLTSSKDRELLEYRNAKISPLMEDHNALEKQTFSLLDSSNQVLEYLT", "length": 499 }, "evidence": [ { "id": "I3LQC9", "url": "https://omabrowser.org/oma/group/I3LQC9/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "G3HQD3-1", "protein_name": "Gypsy retrotransposon integrase-like protein 1", "gene_name": "Gin1", "tax_id": 10029, "organism": "Cricetulus griseus", "sequence": { "sequence": "MVRNGKNGDLHLKQIAYYKRTGEYHPTTLSSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVVVSEEEKKKVLRECHENGTGVHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKNTLLGAPQQHLLTVGSPWSVVTADLMGPFHTSDRSHVYAIIVTDLFTKWVMILPLCDVSASEISKAIINIFFLYGPPQKIVMDQRDEFIEQINTELYRLFGTKQIIISHASGSVSPPESTSSTIKAFLSKHCADHPNTWDEHLPALSFAFNVTPSEPTKNTPYFQMFNRNPYVVECPHDLGGENTSLFARVVAAVREADAVLENKTPSAGQMENNNLEEPNKTKTVKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDHTGARLKRPIKMSHLRPYVRESTEQDSLYLLQGSVVADHDYIGFPEIPVGAYQANILVEDATIGVADDELLATGKDHELLEYRNSKISVLVEDQSSLEKQTFSLLDSSNQVLEYLS", "length": 518 }, "evidence": [ { "id": "I3LQC9", "url": "https://omabrowser.org/oma/group/I3LQC9/", "database": "OMA" } ], "glygen_name": "Hamster", "common_name": "Chinese hamster" }, { "uniprot_canonical_ac": "Q66H30-1", "protein_name": "Gypsy retrotransposon integrase-like protein 1", "gene_name": "GIN1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MVRSGKNGDLHLKQIAYYKRTGEYHPTTLSSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQVAKSTVIVAPQQHLSVVGNPWSVVTVDLMGPFHTSSRSHVYAMIMTDLFTKWVMILPLCDVSASEISKAIINIFFLYGPPQKIIMDQRDEFIDQINVELYRLFGAKEIVISQASGSVNPSESTPSTVKTFLSKHCAEHPETWDEELPALSFAFNVTRVEPTKNSPYFQMFNRNPCLLECPHEGGGEGTSVFARIVAAVREADGVVENQTPAAGQMESSTSEELSKSKVAKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITDSGCAVLRDNTGTRLKRPIKMSHLRPYVREPSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIVDNELLISSKDHELLEYRNSKISALVEDHSSLEKQTFSLLDSSNQVLEYLS", "length": 518 }, "evidence": [ { "id": "I3LQC9", "url": "https://omabrowser.org/oma/group/I3LQC9/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "Q8K259-1", "protein_name": "Gypsy retrotransposon integrase-like protein 1", "gene_name": "Gin1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MVRSGKNGDLHLKQIAYYKRTGEYHPTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPQQHLPMVGNPWSVVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVMILPLCDVSASEISKAIINIFFLYGPPQKIIMDQRDEFIEQINVELYRLFGAKEIVISRASGSVNPAENTPSTIKTFLSKHCADHPNSWDEHLPALSFAFNVTHLEPNKNTPYFQMFNRNPCVLECPPEEGSEGTSVFARIVAAIREADGVVENKTPASSQMENNNSDELSKSKVVKKKAKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGTRLKRPIKMSHLRPYVRESSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIADNELLISSKDHELLEYRNSKISALVEDHSSLEKQTFSLLDSSNQVLEYLS", "length": 518 }, "evidence": [ { "id": "I3LQC9", "url": "https://omabrowser.org/oma/group/I3LQC9/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NXP7-1", "protein_name": "Gypsy retrotransposon integrase-like protein 1", "gene_name": "GIN1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MVRSGKNGDLHLKQIAYYKRTGEYHSTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPKQHLLKVENPWSLVTVDLMGPFHTSNRSHVYAIIMTDLFTKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQQINIELYRLFGIKQIVISHTSGTVNPTESTPNTIKAFLSKHCADHPNNWDDHLSAVSFAFNVTHLEPTKNTPYFQMFSRNPYMPETSDSLHEVDGDNTSMFAKILDAIKEADKIMENKTTSLGQMENNNLDELNKSKIIVKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGVRLKRPIKMSHLKPYIRESSEQESLYLLQGSVVADHDYIGLPEIPIGAYQANILVEDATIGIVDNELLTSSKDRELLEYRNTKISPLIDDHSSLEKQTFSLLDSSNQVLEYLS", "length": 522 }, "evidence": [ { "id": "I3LQC9", "url": "https://omabrowser.org/oma/group/I3LQC9/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "nucleic acid binding", "id": "GO:0003676", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0003676", "evidence": [ { "database": "UniProtKB", "id": "I3LQC9", "url": "https://www.uniprot.org/uniprotkb/I3LQC9" } ], "pmid": "" } ] }, { "name": "Biological Process", "total": 1, "go_terms": [ { "name": "DNA integration", "id": "GO:0015074", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0015074", "evidence": [ { "database": "UniProtKB", "id": "I3LQC9", "url": "https://www.uniprot.org/uniprotkb/I3LQC9" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 329, "end_pos": 331, "annotation": "n_glycosylation_sequon" }, { "start_pos": 339, "end_pos": 341, "annotation": "n_glycosylation_sequon" }, { "start_pos": 346, "end_pos": 348, "annotation": "n_glycosylation_sequon" }, { "start_pos": 80, "end_pos": 82, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LQC9", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LQC9" }, { "id": "PS50994", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50994" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Integrase catalytic", "eco_id": "ECO_0000259", "start_pos": 135, "end_pos": 292, "start_aa": "Lys", "end_aa": "Asn", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [ 242 ], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 329, "end_pos": 331 }, { "start_pos": 339, "end_pos": 341 }, { "start_pos": 346, "end_pos": 348 }, { "start_pos": 80, "end_pos": 82 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl" ] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] }, { "uniprot_canonical_ac": "I3LNR0-1", "uniprot_ac": "I3LNR0", "uniprot_id": "I3LNR0_PIG", "mass": { "chemical_mass": 141713.0, "monoisotopic_mass": 141713.0 }, "refseq": { "ac": "XP_020956759", "name": "TBC1 domain family member 1 isoform 1", "summary": "", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956759" }, "gene_names": [ { "name": "TBC1D1", "type": "recommended", "evidence": [ { "id": "I3LNR0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" } ] }, { "name": "TBC1D1", "type": "synonym", "evidence": [ { "id": "XP_020956759", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956759" } ] } ], "protein_names": [ { "name": "TBC1 domain family member 1", "type": "recommended", "evidence": [ { "id": "I3LNR0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#names_and_taxonomy" } ] }, { "name": "TBC1 (tre-2/USP6, BUB2, cdc16) domain family,member 1", "type": "synonym", "evidence": [ { "id": "XP_020956759", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956759" } ] }, { "name": "TBC1 domain family member 1 isoform 1", "type": "synonym", "evidence": [ { "id": "XP_020956759", "database": "RefSeq", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956759" } ] } ], "function": [ { "annotation": "May act as a GTPase-activating protein for Rab family protein(s). May play a role in the cell cycle and differentiation of various tissues. Involved in the trafficking and translocation of GLUT4-containing vesicles and insulin-stimulated glucose uptake into cells.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2R7P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7P2#function" }, { "database": "UniProtKB", "id": "ARBA00055418", "url": "https://www.uniprot.org/uniprotkb/ARBA00055418#function" }, { "database": "UniProtKB", "id": "A0A5G2RN68", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RN68#function" }, { "database": "UniProtKB", "id": "I3L605", "url": "https://www.uniprot.org/uniprotkb/I3L605#function" }, { "database": "UniProtKB", "id": "I3LNR0", "url": "https://www.uniprot.org/uniprotkb/I3LNR0#function" }, { "database": "UniProtKB", "id": "A0A286ZWF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZWF1#function" }, { "database": "UniProtKB", "id": "A0A287B886", "url": "https://www.uniprot.org/uniprotkb/A0A287B886#function" }, { "database": "UniProtKB", "id": "A0A8W4F702", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F702#function" }, { "database": "UniProtKB", "id": "A0A5G2QPY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPY7#function" }, { "database": "UniProtKB", "id": "F1S4K5", "url": "https://www.uniprot.org/uniprotkb/F1S4K5#function" } ] } ], "disease": [], "snv": [], "mutagenesis": [], "expression_tissue": [], "expression_disease": [], "species": [ { "name": "Sus scrofa", "taxid": 9823, "evidence": [ { "database": "UniProtKB", "id": "I3LNR0", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" } ], "common_name": "Pig", "glygen_name": "Pig", "reference_species": "Sus scrofa [9823]" } ], "gene": [ { "name": "TBC1D1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0", "locus": { "chromosome": "8", "start_pos": 29590571, "end_pos": 29370481, "strand": "-", "evidence": [ { "database": "Ensembl Gene", "id": "ENSSSCG00000028983", "url": "https://www.ensembl.org/id/ENSSSCG00000028983" } ] } } ], "crossref": [ { "id": "ENSSSCG00000028983", "url": "https://bgee.org/?page=gene&gene_id=ENSSSCG00000028983", "database": "Bgee", "categories": [ "Gene Expression" ] }, { "id": "cd00934", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00934", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "cd01269", "url": "https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01269", "database": "CDD", "categories": [ "Protein Classification" ] }, { "id": "100524447", "url": "https://www.ncbi.nlm.nih.gov/gene/100524447", "database": "GeneID", "categories": [ "Genome Annotation" ] }, { "id": "IPR000195", "url": "https://www.ebi.ac.uk/interpro/entry/IPR000195", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR006020", "url": "https://www.ebi.ac.uk/interpro/entry/IPR006020", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR011993", "url": "https://www.ebi.ac.uk/interpro/entry/IPR011993", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR021785", "url": "https://www.ebi.ac.uk/interpro/entry/IPR021785", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR035969", "url": "https://www.ebi.ac.uk/interpro/entry/IPR035969", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "IPR050302", "url": "https://www.ebi.ac.uk/interpro/entry/IPR050302", "database": "InterPro", "categories": [ "Protein Classification" ] }, { "id": "ssc:100524447", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524447", "database": "KEGG Pathway", "categories": [ "Enzyme and Pathway" ] }, { "id": "ETPHEQK", "url": "https://omabrowser.org/oma/group/ETPHEQK/", "database": "OMA", "categories": [ "Protein Classification" ] }, { "id": "I3LNR0", "url": "https://www.orthodb.org/?gene=I3LNR0", "database": "OrthoDB", "categories": [ "Protein Classification" ] }, { "id": "PTHR47219", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47219", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PTHR47219:SF18", "url": "http://www.pantherdb.org/panther/family.do?clsAccession=PTHR47219:SF18", "database": "PANTHER", "categories": [ "Protein Classification" ] }, { "id": "PF00566", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00566", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF00640", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00640", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "PF11830", "url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF11830", "database": "Pfam", "categories": [ "Protein Classification", "Other" ] }, { "id": "XP_020956759", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_020956759", "database": "RefSeq", "categories": [ "Protein" ] }, { "id": "A0A286ZWF1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZWF1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A286ZWF1-1", "url": "https://www.uniprot.org/uniprotkb/A0A286ZWF1-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B886", "url": "https://www.uniprot.org/uniprotkb/A0A287B886", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A287B886-1", "url": "https://www.uniprot.org/uniprotkb/A0A287B886-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPY7", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2QPY7-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPY7-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7P2", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7P2", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2R7P2-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2R7P2-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RN68", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RN68", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A5G2RN68-1", "url": "https://www.uniprot.org/uniprotkb/A0A5G2RN68-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F702", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F702", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "A0A8W4F702-1", "url": "https://www.uniprot.org/uniprotkb/A0A8W4F702-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S4K5", "url": "https://www.uniprot.org/uniprotkb/F1S4K5", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "F1S4K5-1", "url": "https://www.uniprot.org/uniprotkb/F1S4K5-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L605", "url": "https://www.uniprot.org/uniprotkb/I3L605", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3L605-1", "url": "https://www.uniprot.org/uniprotkb/I3L605-1", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LNR0", "url": "https://www.uniprot.org/uniprotkb/I3LNR0", "database": "UniProtKB", "categories": [ "Protein" ] }, { "id": "I3LNR0-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0-1", "database": "UniProtKB", "categories": [ "Protein" ] } ], "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERNGDRPPVGECKSPSGQSSAPAPPPRLNPSASSPNFFKYLKHNSSGEQSGDAVPKSISYRNALRKKLHSSSSVPNFLKFLAPVDENNTSDFMTAKRDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1259, "header": "tr|I3LNR0-1|I3LNR0_PIG Isoform 1 of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=2 CANONICAL=I3LNR0-1" }, "isoforms": [ { "isoform_ac": "A0A286ZWF1-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#A0A286ZWF1-1", "sequence": { "sequence": "MSPLFSWVAKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERKDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1036, "header": "tr|A0A286ZWF1-1|A0A286ZWF1_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=1 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29448841, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000041921.2", "url": "https://www.ensembl.org/id/ENSSSCT00000041921.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000035968.1", "url": "https://www.ensembl.org/id/ENSSSCP00000035968.1" } ] } }, { "isoform_ac": "A0A287B886-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#A0A287B886-1", "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERKDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1165, "header": "tr|A0A287B886-1|A0A287B886_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=1 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29381627, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000046818.2", "url": "https://www.ensembl.org/id/ENSSSCT00000046818.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000052741.1", "url": "https://www.ensembl.org/id/ENSSSCP00000052741.1" } ] } }, { "isoform_ac": "A0A5G2QPY7-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#A0A5G2QPY7-1", "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERNGDRPPVGECKSPSGQSSAPAPPPRLNPSASSPNFFKYLKHNSSGEQSGDAVPKRDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1219, "header": "tr|A0A5G2QPY7-1|I3LNR0_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=1 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29381627, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000079286.1", "url": "https://www.ensembl.org/id/ENSSSCT00000079286.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000064129.1", "url": "https://www.ensembl.org/id/ENSSSCP00000064129.1" } ] } }, { "isoform_ac": "A0A5G2R7P2-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#A0A5G2R7P2-1", "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERNISYRNALRKKLHSSSSVPNFLKFLAPVDENNTSDFMTAKRDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1205, "header": "tr|A0A5G2R7P2-1|A0A5G2R7P2_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=2 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29381627, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000090290.2", "url": "https://www.ensembl.org/id/ENSSSCT00000090290.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000072366.2", "url": "https://www.ensembl.org/id/ENSSSCP00000072366.2" } ] } }, { "isoform_ac": "A0A5G2RN68-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#A0A5G2RN68-1", "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQCSRVTLGNIFLASIEEAHSSPDKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERKDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1187, "header": "tr|A0A5G2RN68-1|A0A5G2RN68_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=2 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29381627, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000081837.2", "url": "https://www.ensembl.org/id/ENSSSCT00000081837.2" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000074210.2", "url": "https://www.ensembl.org/id/ENSSSCP00000074210.2" } ] } }, { "isoform_ac": "A0A8W4F702-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#A0A8W4F702-1", "sequence": { "sequence": "MNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERNGDRPPVGECKSPSGQSSAPAPPPRLNPSASSPNFFKYLKHNSSGEQSGDAVPKSISYRNALRKKLHSSSSVPNFLKFLAPVDENNTSDFMTAKRDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 858, "header": "tr|A0A8W4F702-1|A0A8W4F702_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=1 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29493633, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000099011.1", "url": "https://www.ensembl.org/id/ENSSSCT00000099011.1" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000075043.1", "url": "https://www.ensembl.org/id/ENSSSCP00000075043.1" } ] } }, { "isoform_ac": "F1S4K5-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#F1S4K5-1", "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERKDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1128, "header": "tr|F1S4K5-1|F1S4K5_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=4 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29381627, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000009599.4", "url": "https://www.ensembl.org/id/ENSSSCT00000009599.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000009352.4", "url": "https://www.ensembl.org/id/ENSSSCP00000009352.4" } ] } }, { "isoform_ac": "I3L605-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#I3L605-1", "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERKDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1130, "header": "tr|I3L605-1|I3LNR0_PIG Computationally mapped isoform of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=3 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29381627, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000022915.4", "url": "https://www.ensembl.org/id/ENSSSCT00000022915.4" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000019456.3", "url": "https://www.ensembl.org/id/ENSSSCP00000019456.3" } ] } }, { "isoform_ac": "I3LNR0-1", "url": "https://www.uniprot.org/uniprotkb/I3LNR0/entry#I3LNR0-1", "sequence": { "sequence": "MEPITFTARKHPFPNEASVGFSLQLVGSLRVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKQVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKDDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSELDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVCGGFSPGSVLPPPPPPGEREPGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEENDIENHLMSGHSLVQPTDIEGNRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGAGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHVHIGEIKQASQIAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSTSLDLDSSVSSTLSSTSKEPSVCEKEALPISESAFRLLGSSDDLSSDPEGQPAEELALPSPQQGFRRRANTLSHVPAECPEPPEPARASPGPSQRKLVRYHSVSTETPHERNGDRPPVGECKSPSGQSSAPAPPPRLNPSASSPNFFKYLKHNSSGEQSGDAVPKSISYRNALRKKLHSSSSVPNFLKFLAPVDENNTSDFMTAKRDFESKANHLSDSPGTPVKTRRHSWRQQIFLRVATPQKACDSSGRYEDYSDLGELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPSKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQVQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFEMDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLTSERKLKQATLALELERSALLQTVEQLRRRTVEQGGPEPDLTLPGPAGD", "length": 1259, "header": "tr|I3LNR0-1|I3LNR0_PIG Isoform 1 of TBC1 domain family member 1 OS=Sus scrofa OX=9823 GN=TBC1D1 PE=1 SV=2 CANONICAL=I3LNR0-1" }, "locus": { "chromosome": "8", "start_pos": 29588907, "end_pos": 29381627, "strand": "-", "evidence": [ { "database": "Ensembl Transcript", "id": "ENSSSCT00000023939.3", "url": "https://www.ensembl.org/id/ENSSSCT00000023939.3" }, { "database": "Ensembl Peptide", "id": "ENSSSCP00000025735.2", "url": "https://www.ensembl.org/id/ENSSSCP00000025735.2" } ] } } ], "glycosylation": [], "phosphorylation": [], "glycation": [], "keywords": [], "publication": [ { "title": "An improved pig reference genome sequence to enable pig genetics and genomics research.", "journal": "Gigascience", "date": "2020", "authors": "Flicek P., Griffin D.K., Hall R., Howe K., Kim K., Liu H., Hume D.A., Watson M., Sargent C.A., Affara N., Koren S., Tseng E., Chow W., O'Connor R.E., Tuggle C.K., Archibald A.L., Hannum G., Rund L.A., Nonneman D.J., Rohrer G.A., Finlayson H.A., Schook L.B., Smith T.P.L., Aken B., Billis K., Hourlier T., Phillippy A.M., Beiki H., Bickhart D.M., Eory L., Giron C.G., Izuogu O., Manchanda N., Martin F.J., Rosen B.D., Schroeder S.G., Schwartz A.S., Skinner B.M., Talbot R., Warr A.", "evidence": [ { "database": "UniProtKB", "id": "A0A5G2QPY7", "url": "https://www.uniprot.org/uniprotkb/A0A5G2QPY7" } ], "reference": [ { "type": "PubMed", "id": "32543654", "url": "https://glygen.org/publication/PubMed/32543654" } ] } ], "pathway": [ { "id": "ssc:100524447", "name": "", "url": "https://www.genome.jp/dbget-bin/www_bget?ssc:100524447", "resource": "KEGG Pathway" } ], "orthologs": [ { "uniprot_canonical_ac": "A0A8I5ZMX5-1", "protein_name": "TBC1 domain family member 1", "gene_name": "Tbc1d1", "tax_id": 10116, "organism": "Rattus norvegicus", "sequence": { "sequence": "MEAITFTARKHPFPNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQCSKKEPGMKQVRLWVSPSGLRCEPDLRKSQPWDPLICSSIFECKPQRVHKLIHNSQDPSYFACLIKEDAAHQQSLCYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGRVTVAHKKAPPALIDECIEKFNHVSCGRRIDWDAPTGQPSAPGARPMRKSFSQPGLRSLAFRKEFQDASLRSSTFSSFDNDIENHLIGGHNVVQPTDMEENRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRECSGGGGAGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQAMIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKEHSHTGEPKQTLQVAAENIGSELPPSASRFRLDSLKNRAKRSLTESLESILSRGNKARGLQDHSASVDLDSSTSSTLSNTSKELSMGDKEALPISESSFKLLGSSDDLSSDSESHIAEESALLSPQQAFRRRANTLSHFPVECPAPPEPAQTSPGVSQRKLMRYHSVSTETPHERNVDHLPGGESRCCPGQPSDPPPLPPRLNPSASSPNFFKYLKHNSSGEQSGNAVPKSVSYRNALRKKLHSSSSVPNFLKFLAPVDENNTCDFKNTNRDFESKANHLGDTDGTPVKARRHSWRQQIFLRVATPQKACDSPSRYEDYSELGELPPRSPLEPVCEDGPFGPVQEEKKKTSRELRELWKKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKVHSAVGQGVPRHHRGEIWKFLAEQFHLKHPFPSKQQPKDVPYKELLKKLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEYEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKNTLPNLGLVQMEKTISQVFEMDIAKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANARIQSLEVTVEKLLTSESKLKQAVLTLEMERSALLQMVEELRRQMAQPSTAEPDCTRLEPTGD", "length": 1257 }, "evidence": [ { "id": "I3LNR0", "url": "https://omabrowser.org/oma/group/I3LNR0/", "database": "OMA" } ], "glygen_name": "Rat", "common_name": "Rat" }, { "uniprot_canonical_ac": "A0A8V0YRV2-1", "protein_name": "TBC1 domain family member 1", "gene_name": "TBC1D1", "tax_id": 9031, "organism": "Gallus gallus", "sequence": { "sequence": "MEPITFKAKKYQAPSDFSASFTLQLVGSLPVHSLTTMSMLPWIVAEIRALSNTKSSKEEIGISQIRLYISPSSLRCEPDTGKIQQWDPLICSGLFEYKPQHVHKLIHNSHDPSYFACLIKDGAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEEFQNNLSDIEDPFAKKFEVLFCGRVTVAHKNAPPALIDECIEKFNHASCTKKSDSDSSSQQHETADNSGGFSFSNKFRAVFQPLMGEEEEKRPIRKSFSQPGLRSLAFKKDFQEGSHRSNSFVRSFEEDAISLNLKSQLIYGHSVVQPTDIAENRTMLFTIGQSEVYLISPDTKKVAIEKSFKEISFCSQGIRHVDHFGFICRESSENGGFHFVCYVFQCTDEALVDEIMMTLKQAFTVAAVQQTSKAQPQLCETCPLQSLHKLCEKIEGLHPSKTKLELQKHLTTLNSQEQASVFEEVKKLRPRNDQKENELIISILRNMYEEKQKNHVHVGEGKQTSQPSAENAVNEVPSSAPRFRLDMLKNKAKRSLTESFESILSRGSKTRGPLDSSSGSVDLEASVSSNLSSTNKEQPLSERETDRVPTLPPENAVKSSGSVGDLSSDPDSYAIDHSVTLPQQSFRRRANTLSHLPSESRESLVPVETSPSVPQRKLMRYHSVSTETPHKRNSSGQLARSPTLARLNPSASSPNFFKYLRHNSSGEQSGHFAQKSISYRTALRKKLHSSSSVPNFLKFLAPVDENNTSDFRSTTSDYESKHSQQAAGADSPVRTRRHSWRQQIFLRVATPQKACDSPSRYDDYTELGELPPRSPLEPVCEDGPFGPVKEERKRTSRELRELWKKAIIQQILLLRMEKENQKLQASENNLQNRRLKLDYEEITPCLKEVTLIWEKMLSTPGRSKIKFDMEKIHSAVGQGVPRHHRGEIWKFLAEQYHLKHQFPNKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGVLLLHMSEEDAFKMLKFLMFDVGLRKQYRPDMTILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMFASQFPLGFVARVFDMLFLQGSEAIFKVALSLLGSHKPLILQHENLETIVDFIKNTLPNLGLVQMEKTISQVFEMDIAKQLQAYEVEYHVLQDELIDSSLNDNQRLDKLEKANSSLRKQNFELLEELQVANGKIQNLEATVELLLTNEGKLKESILTLEQERTALQKAVEEMRRKIGDTNEKPLLTRQEHLDAD", "length": 1278 }, "evidence": [ { "id": "I3LNR0", "url": "https://omabrowser.org/oma/group/I3LNR0/", "database": "OMA" } ], "glygen_name": "Chicken", "common_name": "Chicken" }, { "uniprot_canonical_ac": "O97790-1", "protein_name": "TBC1 domain family member 1", "gene_name": "TBC1D1", "tax_id": 9913, "organism": "Bos taurus", "sequence": { "sequence": "MEPITFTARKHPFPNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQSSKKEPGTKPVRLCVSPSGLRCEPEPGKSQQWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKNDAANQQSICYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGRVAVAHRKAPPALIDECIEGFSHVSGGFSSDQSRSALQPPGDGERGPRPMRKSFSQPGLRSLAFRKEFQDAGLRSSSFFSSFEESDIENHLISGHNIVQPTDIEENRTMLFTIGQSEVYLISPDTKKIALQKNFKEISFCSQGIRHVDHFGFICRESSGGGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKVHIHIGEIKQTSQIAAENIGSELPSSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSASLDLDSSVSSMFSNTSKEPSGYEKEALPISESCFRLLGSSDDLSSDSESQLTEEPALLSPKQGFRRRANTLSHVPVECQEPPQLVRGSPGVSQRKLVRYHSVSTETPHERKDFESKADHISDASRTPVKTRRHSWRQQIFLRVATPQKACESPKRYEDYSELGELPPRSPLEPVCEDGPFGPVPEEKKRTSHELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKILSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQYHLKHPFPCKQQPKDTPYKELLKQLTSQQHAILIDLGRTFPTHPYYSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFETDISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATVEKLLTSESKLKQATLALELERSALLQTVEQLRRQTAELGSQESDPTLPKPSGD", "length": 1165 }, "evidence": [ { "id": "I3LNR0", "url": "https://omabrowser.org/oma/group/I3LNR0/", "database": "OMA" } ], "glygen_name": "Bovine", "common_name": "Bovine" }, { "uniprot_canonical_ac": "Q60949-1", "protein_name": "TBC1 domain family member 1", "gene_name": "Tbc1d1", "tax_id": 10090, "organism": "Mus musculus", "sequence": { "sequence": "MEAITFTARKHPFPNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQCSKKEPRTKQVRLWVSPSGLRCEPDLEKSQPWDPLICSSIFECKPQRVHKLIHNSHDPSYFACLIKEDAAHRQSLCYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGRVTVAHKKAPPALIDECIEKFNHVSCGRRTDWEAPTGQPSAPGPRPMRKSFSQPGLRSLAFRKEFQDASLRSSTFSSFDNDIENHLIGGHNVVQPTDMEENRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRECSGGGSGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKEHSHTGEPKQTLQVAAENIGSDLPPSASRFRLDSLKNRAKRSLTESLESILSRGNKARGLQDHSASVDLDSSTSSTLSNTSKELSMGDKEAFPVSETSFKLLGSSDDLSSDSEGHIAEESALLSPQQAFRRRANTLSHFPVECPAPPEPAQSSPGVSQRKLMRYHSVSTETPHERNVDHLPGGESQGCPGQPSAPPPPRLNPSASSPNFFKYLKHNSSGEQSGNAVPKSVSYRNALRKKLHSSSSVPNFLKFLAPVDENNTCDFKNTNRDFESKANHLGDTDGTPVKTRRHSWRQQIFLRVATPQKACDSPSRYEDYSELGELPPRSPLEPVCEDGPFGPVQEEKRKTSRELRELWKKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKVHSAVGQGVPRHHRGEIWKFLAEQFHLKHPFPSKQQPKDVPYKELLKKLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKNTLPNLGLVQMEKTISQVFEMDIAKQLQAYEVEYHVLQEELIESSPLSDNQRMEKLEKTNSSLRKQNLDLLEQLQVANARIQSLEATVEKLLTSESKLKQAALTLEVERSALLQMVEELRRQSARPSTPEPDCTQLEPTGD", "length": 1255 }, "evidence": [ { "id": "I3LNR0", "url": "https://omabrowser.org/oma/group/I3LNR0/", "database": "OMA" } ], "glygen_name": "Mouse", "common_name": "Mouse" }, { "uniprot_canonical_ac": "Q86TI0-1", "protein_name": "TBC1 domain family member 1", "gene_name": "TBC1D1", "tax_id": 9606, "organism": "Homo sapiens", "sequence": { "sequence": "MEPITFTARKHLLSNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSRQSTRKEPVTKQVRLCVSPSGLRCEPEPGRSQQWDPLIYSSIFECKPQRVHKLIHNSHDPSYFACLIKEDAVHRQSICYVFKADDQTKVPEIISSIRQAGKIARQEELHCPSEFDDTFSKKFEVLFCGRVTVAHKKAPPALIDECIEKFNHVSGSRGSESPRPNPPHAAPTGSQEPVRRPMRKSFSQPGLRSLAFRKELQDGGLRSSGFFSSFEESDIENHLISGHNIVQPTDIEENRTMLFTIGQSEVYLISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGGGGFHFVCYVFQCTNEALVDEIMMTLKQAFTVAAVQQTAKAPAQLCEGCPLQSLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQATIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKEHIHIGEMKQTSQMAAENIGSELPPSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSISVDLDSSLSSTLSNTSKEPSVCEKEALPISESSFKLLGSSEDLSSDSESHLPEEPAPLSPQQAFRRRANTLSHFPIECQEPPQPARGSPGVSQRKLMRYHSVSTETPHERKDFESKANHLGDSGGTPVKTRRHSWRQQIFLRVATPQKACDSSSRYEDYSELGELPPRSPLEPVCEDGPFGPPPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASENDLLNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLAEQFHLKHQFPSKQQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMFASQFPLGFVARVFDMIFLQGTEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTINQVFEMDIAKQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANGRIQSLEATIEKLLSSESKLKQAMLTLELERSALLQTVEELRRRSAEPSDREPECTQPEPTGD", "length": 1168 }, "evidence": [ { "id": "I3LNR0", "url": "https://omabrowser.org/oma/group/I3LNR0/", "database": "OMA" } ], "glygen_name": "Human", "common_name": "Human" } ], "go_annotation": { "categories": [ { "name": "Molecular Function", "total": 1, "go_terms": [ { "name": "GTPase activator activity", "id": "GO:0005096", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005096", "evidence": [ { "database": "UniProtKB", "id": "I3LNR0", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" } ], "pmid": "" } ] }, { "name": "Cellular Component", "total": 3, "go_terms": [ { "name": "nucleus", "id": "GO:0005634", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005634", "evidence": [ { "database": "UniProtKB", "id": "I3LNR0", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" } ], "pmid": "" }, { "name": "cytoplasm", "id": "GO:0005737", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005737", "evidence": [ { "database": "UniProtKB", "id": "I3LNR0", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" } ], "pmid": "" }, { "name": "Golgi apparatus", "id": "GO:0005794", "url": "https://www.ebi.ac.uk/QuickGO/term/GO:0005794", "evidence": [ { "database": "UniProtKB", "id": "I3LNR0", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" } ], "pmid": "" } ] } ] }, "pro_annotation": [], "site_annotation": [ { "start_pos": 1178, "end_pos": 1180, "annotation": "n_glycosylation_sequon" }, { "start_pos": 285, "end_pos": 287, "annotation": "n_glycosylation_sequon" }, { "start_pos": 403, "end_pos": 405, "annotation": "n_glycosylation_sequon" }, { "start_pos": 675, "end_pos": 677, "annotation": "n_glycosylation_sequon" }, { "start_pos": 718, "end_pos": 720, "annotation": "n_glycosylation_sequon" }, { "start_pos": 719, "end_pos": 721, "annotation": "n_glycosylation_sequon" } ], "ptm_annotation": [], "interactions": [], "reactions": [], "reaction_participants": [], "reaction_enzymes": [], "biomarkers": [], "structures": [], "lectin_list": [], "domain_list": [ { "evidence": [ { "id": "I3LNR0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" }, { "id": "PS01179", "database": "PROSITE", "url": "https://prosite.expasy.org/PS01179" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "PID", "eco_id": "ECO_0000259", "start_pos": 292, "end_pos": 371, "start_aa": "Ile", "end_aa": "Ala", "glycosite_overlap": "" }, { "evidence": [ { "id": "I3LNR0", "database": "UniProtKB", "url": "https://www.uniprot.org/uniprotkb/I3LNR0" }, { "id": "PS50086", "database": "PROSITE", "url": "https://prosite.expasy.org/PS50086" } ], "ann_type": "Domain_Extent_Annotation", "uniprotkb_annotation": "Rab-GAP TBC", "eco_id": "ECO_0000259", "start_pos": 891, "end_pos": 1085, "start_aa": "Gly", "end_aa": "Gly", "glycosite_overlap": "" } ], "binding_sites": [], "synthesized_glycans": [], "enzyme_annotation": [], "cluster_types": [ { "name": "isoformset.uniprotkb", "label": "Isoforms" }, { "name": "homologset.oma", "label": "OMA Homologs" } ], "sequence_features": { "n_linked_sites": [], "o_linked_sites": [], "snv_sites": [], "glycation_sites": [], "phosphorylation_sites": [], "sequon_annotation_sites": [ { "start_pos": 1178, "end_pos": 1180 }, { "start_pos": 285, "end_pos": 287 }, { "start_pos": 403, "end_pos": 405 }, { "start_pos": 675, "end_pos": 677 }, { "start_pos": 718, "end_pos": 720 }, { "start_pos": 719, "end_pos": 721 } ] }, "class_list": [], "section_stats": [ { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "snv_non_disease", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "publication", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "title", "journal", "date", "authors" ] } ] } ]